Citrus Sinensis ID: 013679
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C5U8 | 466 | Histidinol dehydrogenase, | yes | no | 0.993 | 0.933 | 0.855 | 0.0 | |
| Q5NAY4 | 473 | Histidinol dehydrogenase, | yes | no | 0.984 | 0.911 | 0.844 | 0.0 | |
| P24226 | 469 | Histidinol dehydrogenase, | N/A | no | 0.997 | 0.931 | 0.846 | 0.0 | |
| Q9P777 | 439 | Histidinol dehydrogenase | yes | no | 0.965 | 0.963 | 0.516 | 1e-122 | |
| P62459 | 443 | Histidinol dehydrogenase | yes | no | 0.979 | 0.968 | 0.508 | 1e-119 | |
| P07685 | 870 | Histidine biosynthesis tr | N/A | no | 0.970 | 0.488 | 0.503 | 1e-118 | |
| Q9F854 | 431 | Histidinol dehydrogenase | yes | no | 0.965 | 0.981 | 0.505 | 1e-117 | |
| Q7MLS6 | 431 | Histidinol dehydrogenase | yes | no | 0.974 | 0.990 | 0.508 | 1e-117 | |
| Q8D8Q0 | 431 | Histidinol dehydrogenase | yes | no | 0.974 | 0.990 | 0.508 | 1e-117 | |
| P00815 | 799 | Histidine biosynthesis tr | yes | no | 0.933 | 0.511 | 0.503 | 1e-115 |
| >sp|Q9C5U8|HISX_ARATH Histidinol dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=HDH PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/435 (85%), Positives = 413/435 (94%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ ++V SLK+RPRIDFSSIF+ V+PI+D VR+ GD +VK+YTERFDKV+L
Sbjct: 32 MKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQLN 91
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
KVVE++SEL PELD+ VKEAFDVAY+NIYAFHLAQKS E SVENMKGVRCKRV+RSIGS
Sbjct: 92 KVVEDMSELSVPELDSNVKEAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVSRSIGS 151
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPPS+DGSICKEVLYCAK+AGVTHIL
Sbjct: 152 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPSKDGSICKEVLYCAKRAGVTHIL 211
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAI+AMAWGT+SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 212 KAGGAQAIAAMAWGTDSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 271
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD +ASPV+IAADLLSQAEHGPDSQVVLV+VGD VDL+AIE+EI+KQC+SLPRGEFASKA
Sbjct: 272 ADEHASPVYIAADLLSQAEHGPDSQVVLVVVGDSVDLNAIEEEIAKQCKSLPRGEFASKA 331
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E ISFSNLYAPEHLI+NVKDAEKWE +IENAGSVF+G WTPESVGDY
Sbjct: 332 LSHSFTVFARDMIEAISFSNLYAPEHLIINVKDAEKWEGLIENAGSVFIGPWTPESVGDY 391
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMY GVSLDSFLK+MTVQSLTEEGL+ LGPYVATMAEIEGL+AHKR
Sbjct: 392 ASGTNHVLPTYGYARMYSGVSLDSFLKFMTVQSLTEEGLRNLGPYVATMAEIEGLDAHKR 451
Query: 421 AVTFRLQDIEARQVS 435
AVT RL+DIEA+Q++
Sbjct: 452 AVTLRLKDIEAKQLA 466
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|Q5NAY4|HISX_ORYSJ Histidinol dehydrogenase, chloroplastic OS=Oryza sativa subsp. japonica GN=HDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/431 (84%), Positives = 400/431 (92%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ AEV LKARPRIDFSSIF V+PIV+DVR RGDA+VKDYT +FDKV L+
Sbjct: 39 MKSYRLSELSDAEVGGLKARPRIDFSSIFGTVNPIVEDVRMRGDAAVKDYTVKFDKVALD 98
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
VV VS+LPD ELD AVKEAFDVAY+NIYAFH++QK E +VENMKGVRCKR+ R IGS
Sbjct: 99 DVVVRVSDLPDVELDPAVKEAFDVAYDNIYAFHVSQKLPEKTVENMKGVRCKRITRCIGS 158
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML+VPAQIAGCKTVVLATPPS+DGSICKEVLYCAKKAGVTH+L
Sbjct: 159 VGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPSRDGSICKEVLYCAKKAGVTHVL 218
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGT SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 219 KAGGAQAISAMAWGTVSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 278
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD YA+PVH+AADLLSQAEHGPDSQVVLV+ GDGVDL AIE E+SKQC +LPRGEFASKA
Sbjct: 279 ADKYANPVHVAADLLSQAEHGPDSQVVLVVAGDGVDLGAIEAEVSKQCSALPRGEFASKA 338
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
LGHSF VFA+DM+E ISFSN+YAPEHLI+NVKDAE+WE ++ENAGSVFLG+WTPESVGDY
Sbjct: 339 LGHSFTVFAKDMVEAISFSNMYAPEHLIINVKDAEQWEDLVENAGSVFLGQWTPESVGDY 398
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMY GVSL+SFLKY+TVQSL+EEGL+ LGP+VA MAE+EGLEAH+R
Sbjct: 399 ASGTNHVLPTYGYARMYSGVSLNSFLKYITVQSLSEEGLRSLGPHVAKMAEVEGLEAHRR 458
Query: 421 AVTFRLQDIEA 431
AVT RLQDIEA
Sbjct: 459 AVTLRLQDIEA 469
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P24226|HISX_BRAOC Histidinol dehydrogenase, chloroplastic OS=Brassica oleracea var. capitata GN=HDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/437 (84%), Positives = 414/437 (94%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ ++V++LKARPRIDFSSIF+ V+PI+D VR++GD +VK+YTERFDKV+L
Sbjct: 33 MKSYRLSELSFSQVENLKARPRIDFSSIFTTVNPIIDAVRSKGDTAVKEYTERFDKVQLN 92
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
KVVE+VSEL PELD+AVKEAFDVAY+NIYAFH AQ S E SVENMKGVRCKRV+RSIGS
Sbjct: 93 KVVEDVSELDIPELDSAVKEAFDVAYDNIYAFHFAQMSTEKSVENMKGVRCKRVSRSIGS 152
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPP+++GSICKEVLYCAK+AGVTHIL
Sbjct: 153 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPTKEGSICKEVLYCAKRAGVTHIL 212
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAI+AMAWGT+SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 213 KAGGAQAIAAMAWGTDSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 272
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD +ASPV+IAADLLSQAEHGPDSQVVLV+VGDGV+L AIE+EI+KQC+SLPRGEFASKA
Sbjct: 273 ADEHASPVYIAADLLSQAEHGPDSQVVLVVVGDGVNLKAIEEEIAKQCKSLPRGEFASKA 332
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E I+FSNLYAPEHLI+NVKDAEKWE +IENAGSVF+G WTPESVGDY
Sbjct: 333 LSHSFTVFARDMIEAITFSNLYAPEHLIINVKDAEKWEGLIENAGSVFIGPWTPESVGDY 392
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMY GVSLDSFLK+MTVQSLTEEGL+ LGPYVATMAEIEGL+AHKR
Sbjct: 393 ASGTNHVLPTYGYARMYSGVSLDSFLKFMTVQSLTEEGLRNLGPYVATMAEIEGLDAHKR 452
Query: 421 AVTFRLQDIEARQVSSK 437
AVT RL+DIEA+Q +K
Sbjct: 453 AVTLRLKDIEAKQTQTK 469
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Brassica oleracea var. capitata (taxid: 3716) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9P777|HISX_SCHPO Histidinol dehydrogenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=his2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/426 (51%), Positives = 298/426 (69%), Gaps = 3/426 (0%)
Query: 3 SYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKV 62
SYR + LT E L ARP + I ++V PI++DV++RG+AS+ DY +F+KV+L+
Sbjct: 10 SYRAAALTAEERTRLLARPIQNTQKIRTIVQPIIEDVKSRGEASLIDYASKFEKVQLKSA 69
Query: 63 VENVSELPD-PELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSV 121
V D ++ +KE D+A+NNI+AFH +Q +V+ M+GV C+R++R I V
Sbjct: 70 VLKAPFDDDLMKISPMIKEDIDIAFNNIFAFHSSQLRPTIAVQTMRGVVCQRMSRPINRV 129
Query: 122 GLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILK 181
GLY+PGGTAVLPSTALML VPA++AGC VV++TP +DG++ E++Y A K G I+
Sbjct: 130 GLYIPGGTAVLPSTALMLGVPAKVAGCPHVVISTPVRKDGTVAPEIVYIANKIGAEAIIL 189
Query: 182 AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVI 240
AGGAQAI+AMA+G PKV KIFGPGNQ+VTAAKM +QN A+++ID+PAGPSEVLVI
Sbjct: 190 AGGAQAIAAMAYGISGVPKVNKIFGPGNQFVTAAKMHVQNDYGALVAIDLPAGPSEVLVI 249
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDL-DAIEQEISKQCQSLPRGEFASK 299
AD +P +A DLLSQAEHG DSQ++L+ V ++ D I++ I+ L R
Sbjct: 250 ADETCNPESVALDLLSQAEHGLDSQIILLTVSLSPEMFDRIQKAINDHALRLSRSYIIKH 309
Query: 300 ALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGD 359
A+ S +V ++ + +SNLY PEHL++++K+A + I+NAGSVF+G W+P S+GD
Sbjct: 310 AIKKSVIVQVDNVDQAFEWSNLYGPEHLVLHLKNASSYIPKIDNAGSVFVGPWSPVSMGD 369
Query: 360 YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHK 419
YASGTNH LPTYGYA Y GVS DSFLKY+T Q LTEEG+++LGP V +AE+EGL AH
Sbjct: 370 YASGTNHTLPTYGYASSYSGVSTDSFLKYITTQELTEEGIQRLGPTVIRLAELEGLTAHA 429
Query: 420 RAVTFR 425
AV R
Sbjct: 430 DAVRVR 435
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P62459|HISX_PHOPR Histidinol dehydrogenase OS=Photobacterium profundum GN=hisD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/437 (50%), Positives = 291/437 (66%), Gaps = 8/437 (1%)
Query: 1 MKSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
MK+ L+ + +SL RP I + ++I ++V +V DVR RGD ++ + TE+FD+V+
Sbjct: 1 MKTVVWQSLSENQQESLLQRPAITEGANITAIVADVVADVRQRGDEALLELTEKFDRVRP 60
Query: 60 E--KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARS 117
+ +V E L +K+A AY NI FH AQK+ VE GV C++V R
Sbjct: 61 DSIRVSEQEVTAATSRLSDNMKQALQQAYQNIATFHKAQKTKPLRVETQPGVVCEQVTRP 120
Query: 118 IGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT 177
I SVGLY+PGG+A LPST LML VPAQIAGC+ VVL +PP I E+LY A+ G+T
Sbjct: 121 INSVGLYIPGGSAPLPSTVLMLGVPAQIAGCRQVVLCSPPP----IADEILYVAQLCGIT 176
Query: 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 237
I GG+QAI+AMA+GT+S +V+KIFGPGN +VT AK + N +IDMPAGPSEV
Sbjct: 177 EIYNIGGSQAIAAMAYGTKSVARVDKIFGPGNAFVTEAKRQVSNDFRGAAIDMPAGPSEV 236
Query: 238 LVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFA 297
LVIAD A P IAADLLSQAEHGPDSQV+L+ + D + I Q + LPR + A
Sbjct: 237 LVIADKTADPDFIAADLLSQAEHGPDSQVILLTPEPSI-ADRVADAIQLQLKVLPRADIA 295
Query: 298 SKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESV 357
+ALG S ++ + + IS SN Y PEHLIV ++ + +++NAGS+FLG+W+PESV
Sbjct: 296 RQALGSSILIVTETISQCISISNHYGPEHLIVQTREPRELVPLLDNAGSIFLGDWSPESV 355
Query: 358 GDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEA 417
GDYASGTNHVLPTYGY R Y + L F K MTVQ LT +GLK L P V TMAE EGL+A
Sbjct: 356 GDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLKILAPTVVTMAEAEGLDA 415
Query: 418 HKRAVTFRLQDIEARQV 434
HKRAVT R++ ++ +++
Sbjct: 416 HKRAVTIRIEKLQQQEI 432
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Photobacterium profundum (taxid: 74109) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P07685|HIS2_NEUCR Histidine biosynthesis trifunctional protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=his-3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/435 (50%), Positives = 295/435 (67%), Gaps = 10/435 (2%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
M+ + S+++ E+ + RP S +I+ ++ PI++DVR GD +V YT +F+K
Sbjct: 432 MRRFDASKVSTEELDAALKRPAQKSSDAIYKIIVPIIEDVRKNGDKAVLSYTHKFEKAT- 490
Query: 60 EKVVENVSELPDP----ELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSVENMKGVRCKRV 114
+ V + P P +L A DV++ NI FH AQK + VE M GV C R
Sbjct: 491 -SLTSPVLKAPFPKELMQLPEETIAAIDVSFENIRKFHAAQKEEKPLQVETMPGVVCSRF 549
Query: 115 ARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKA 174
+R I +VG Y+PGGTAVLPSTALML VPA +AGC +V A+PP DG+I E++Y A K
Sbjct: 550 SRPIEAVGCYIPGGTAVLPSTALMLGVPAMVAGCNKIVFASPPRADGTITPEIVYVAHKV 609
Query: 175 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAG 233
G I+ AGGAQA++AMA+GTES KV+KI GPGNQ+VTAAKM + N + A + IDMPAG
Sbjct: 610 GAESIVLAGGAQAVAAMAYGTESITKVDKILGPGNQFVTAAKMFVSNDTNAAVGIDMPAG 669
Query: 234 PSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVG-DGVDLDAIEQEISKQCQSLP 292
PSEVLVIAD A+P +A+DLLSQAEHG DSQV+L+ + D L AIE E+ +Q LP
Sbjct: 670 PSEVLVIADKDANPAFVASDLLSQAEHGVDSQVILIAIDLDEEHLQAIEDEVHRQATELP 729
Query: 293 RGEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEW 352
R + ++ HS V + + E + SN YAPEHLI+ +K+AEK ++ NAGSVF+G W
Sbjct: 730 RVQIVRGSIAHSITVQVKTVEEAMELSNKYAPEHLILQIKEAEKAVDLVMNAGSVFIGAW 789
Query: 353 TPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEI 412
TPESVGDY++G NH LPTYG+A+ Y GV+L SF+K++T +LT EGLK +G V +A++
Sbjct: 790 TPESVGDYSAGVNHSLPTYGFAKQYSGVNLASFVKHITSSNLTAEGLKNVGQAVMQLAKV 849
Query: 413 EGLEAHKRAVTFRLQ 427
E LEAH+RAV+ RL+
Sbjct: 850 EELEAHRRAVSIRLE 864
|
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9F854|HISX_VIBCH Histidinol dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=hisD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/441 (50%), Positives = 288/441 (65%), Gaps = 18/441 (4%)
Query: 1 MKSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
M++ L+ A+ +S+ RP I + ++I + V ++ VR+ GDA++ + TE+FD+VK
Sbjct: 1 MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKP 60
Query: 60 EKVVENVSELPDPELDAA-------VKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCK 112
+ + E+DAA +K+A + AYNNI FH AQK+ VE M GV C+
Sbjct: 61 ASL-----RVSREEMDAAAARLSETMKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCE 115
Query: 113 RVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAK 172
+V R I VGLY+PGG+A LPST LML VPAQIAGC+ VVL +PP I E+LY AK
Sbjct: 116 QVTRPINKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPP----IADEILYVAK 171
Query: 173 KAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPA 232
+ + GG QAI+AMA+GTE+ KV+KIFGPGN YVT AK + N +IDMPA
Sbjct: 172 LCNIDEVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPA 231
Query: 233 GPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP 292
GPSEVLVIAD A IAADLLSQAEHGPDSQVVLV V D + + KQ + L
Sbjct: 232 GPSEVLVIADETADANFIAADLLSQAEHGPDSQVVLV-TPSPVLADQVTDAVQKQLKVLS 290
Query: 293 RGEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEW 352
R A KAL S ++ A + + +S SN Y PEHLIV ++ + +++NAGS+FLG+W
Sbjct: 291 RASIAEKALASSLIIIAESLTQAVSISNYYGPEHLIVQTRNPRELVPLLDNAGSIFLGDW 350
Query: 353 TPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEI 412
+PESVGDYASGTNHVLPTYGY R Y + L F K MTVQ LT +GL+ L P V TMAE
Sbjct: 351 SPESVGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLLAPTVVTMAEA 410
Query: 413 EGLEAHKRAVTFRLQDIEARQ 433
EGL+AHKRAVT R++ ++ Q
Sbjct: 411 EGLDAHKRAVTIRVEKLQKAQ 431
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q7MLS6|HISX_VIBVY Histidinol dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=hisD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/435 (50%), Positives = 281/435 (64%), Gaps = 8/435 (1%)
Query: 1 MKSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
M++ L+ + ++ RP I + ++I + V ++ VR GDA++ + TE+FD++K
Sbjct: 1 MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRIKP 60
Query: 60 E--KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARS 117
E +V E E L A +K+A + AY NI FH AQK VE GV C++V R
Sbjct: 61 ESIRVTEQEIEEASARLTAKMKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRP 120
Query: 118 IGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT 177
I VGLY+PGG+A LPST LML VPAQIAGC+ VVL +PP I E+LY AK +
Sbjct: 121 IQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPP----IADEILYVAKLCNID 176
Query: 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 237
+ GG QA++AMA+GTES KV+KIFGPGN YVT AK + N +IDMPAGPSEV
Sbjct: 177 EVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEV 236
Query: 238 LVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFA 297
LVIAD A IAADLLSQAEHGPDSQVVLV + D + + KQ + L R A
Sbjct: 237 LVIADETADADFIAADLLSQAEHGPDSQVVLVTPSVLI-ADQVTDAVQKQLKQLSRASIA 295
Query: 298 SKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESV 357
KAL S ++ A + + +S SN Y PEHLIV K+ + +++NAGS+FLG+W+PES
Sbjct: 296 EKALASSLIIIADSLTQAVSISNYYGPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESA 355
Query: 358 GDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEA 417
GDYASGTNHVLPTYGY R Y + L F K MTVQ L+ EGLK L P V TMAE EGL+A
Sbjct: 356 GDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELSAEGLKNLAPTVVTMAEAEGLDA 415
Query: 418 HKRAVTFRLQDIEAR 432
HKRAVT R++ + AR
Sbjct: 416 HKRAVTIRVEKLTAR 430
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Vibrio vulnificus (strain YJ016) (taxid: 196600) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q8D8Q0|HISX_VIBVU Histidinol dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=hisD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/435 (50%), Positives = 281/435 (64%), Gaps = 8/435 (1%)
Query: 1 MKSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
M++ L+ + ++ RP I + ++I + V ++ VR GDA++ + TE+FD+VK
Sbjct: 1 MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRVKP 60
Query: 60 E--KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARS 117
E +V E E L A +K+A + AY NI FH AQK VE GV C++V R
Sbjct: 61 ESIRVTEQEIEEASARLTAKMKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRP 120
Query: 118 IGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT 177
I VGLY+PGG+A LPST LML VPAQIAGC+ VVL +PP I E+LY AK +
Sbjct: 121 IQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPP----IADEILYVAKLCNID 176
Query: 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 237
+ GG QA++AMA+GTES KV+KIFGPGN YVT AK + N +IDMPAGPSEV
Sbjct: 177 EVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEV 236
Query: 238 LVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFA 297
LVIAD A IAADLLSQAEHGPDSQVVLV + D + + KQ + L R A
Sbjct: 237 LVIADETADADFIAADLLSQAEHGPDSQVVLVTPSVLI-ADQVTDAVQKQLKQLSRASIA 295
Query: 298 SKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESV 357
KAL S ++ A + + +S SN Y PEHLIV K+ + +++NAGS+FLG+W+PES
Sbjct: 296 EKALASSLIIIADSLTQAVSISNYYGPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESA 355
Query: 358 GDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEA 417
GDYASGTNHVLPTYGY R Y + L F K MT+Q L+ EGLK L P V TMAE EGL+A
Sbjct: 356 GDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTIQELSAEGLKTLAPTVVTMAEAEGLDA 415
Query: 418 HKRAVTFRLQDIEAR 432
HKRAVT R++ + AR
Sbjct: 416 HKRAVTIRVEKLNAR 430
|
Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. Vibrio vulnificus (taxid: 672) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P00815|HIS2_YEAST Histidine biosynthesis trifunctional protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HIS4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/429 (50%), Positives = 289/429 (67%), Gaps = 20/429 (4%)
Query: 14 VQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPE 73
VQ +RP S I +V+PI+++VR++G++++ +YTE+FD VKL V N P PE
Sbjct: 370 VQKALSRPIQKTSEIMHLVNPIIENVRDKGNSALLEYTEKFDGVKLSNPVLNA---PFPE 426
Query: 74 -----LDAAVKEAFDVAYNNIYAFHLAQKSAET-SVENMKGVRCKRVARSIGSVGLYVPG 127
L +KEA D++ N+ FH AQ ET VE GV C R R I VGLY+PG
Sbjct: 427 EYFEGLTEEMKEALDLSIENVRKFHAAQLPTETLEVETQPGVLCSRFPRPIEKVGLYIPG 486
Query: 128 GTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ-DGSICKEVLYCAKKAGVTHILKAGGAQ 186
GTA+LPSTALML VPAQ+A CK +V A+PP + DG + EV+Y A+K G + I+ AGGAQ
Sbjct: 487 GTAILPSTALMLGVPAQVAQCKEIVFASPPRKSDGKVSPEVVYVAEKVGASKIVLAGGAQ 546
Query: 187 AISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAGPSEVLVIADIYA 245
A++AMA+GTE+ PKV+KI GPGNQ+VTAAKM +QN ++A+ SIDMPAGPSEVLVIAD A
Sbjct: 547 AVAAMAYGTETIPKVDKILGPGNQFVTAAKMYVQNDTQALCSIDMPAGPSEVLVIADEDA 606
Query: 246 SPVHIAADLLSQAEHGPDSQVVLVIVGDGVDL-----DAIEQEISKQCQSLPRGEFASKA 300
+A+DLLSQAEHG DSQV+LV GV+L I+ + Q LPR + K
Sbjct: 607 DVDFVASDLLSQAEHGIDSQVILV----GVNLSEKKIQEIQDAVHNQALQLPRVDIVRKC 662
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
+ HS +V E + SN YAPEHLI+ + +A + +++NAGSVF+G +TPES GDY
Sbjct: 663 IAHSTIVLCDGYEEALEMSNQYAPEHLILQIANANDYVKLVDNAGSVFVGAYTPESCGDY 722
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
+SGTNH LPTYGYAR Y G + +F K++T Q++T EGL+ +G V +A+ EGL+ H+
Sbjct: 723 SSGTNHTLPTYGYARQYSGANTATFQKFITAQNITPEGLENIGRAVMCVAKKEGLDGHRN 782
Query: 421 AVTFRLQDI 429
AV R+ +
Sbjct: 783 AVKIRMSKL 791
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | ||||||
| 224061605 | 441 | predicted protein [Populus trichocarpa] | 1.0 | 0.993 | 0.899 | 0.0 | |
| 224122154 | 441 | predicted protein [Populus trichocarpa] | 1.0 | 0.993 | 0.899 | 0.0 | |
| 359493020 | 562 | PREDICTED: histidinol dehydrogenase, chl | 1.0 | 0.779 | 0.883 | 0.0 | |
| 296088118 | 546 | unnamed protein product [Vitis vinifera] | 1.0 | 0.802 | 0.883 | 0.0 | |
| 255564978 | 479 | histidinol dehydrogenase, putative [Rici | 0.990 | 0.906 | 0.900 | 0.0 | |
| 356555910 | 471 | PREDICTED: histidinol dehydrogenase, chl | 0.993 | 0.923 | 0.862 | 0.0 | |
| 449435520 | 490 | PREDICTED: histidinol dehydrogenase, chl | 1.0 | 0.893 | 0.853 | 0.0 | |
| 449488538 | 490 | PREDICTED: histidinol dehydrogenase, chl | 1.0 | 0.893 | 0.853 | 0.0 | |
| 388513273 | 474 | unknown [Lotus japonicus] | 0.990 | 0.915 | 0.857 | 0.0 | |
| 10177677 | 467 | histidinol dehydrogenase [Arabidopsis th | 0.993 | 0.931 | 0.855 | 0.0 |
| >gi|224061605|ref|XP_002300563.1| predicted protein [Populus trichocarpa] gi|222847821|gb|EEE85368.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/438 (89%), Positives = 417/438 (95%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL ++EV+SLKARPRIDFSSIF +V+PIVDDVR RGDA+VKDYT RFDKVKL+
Sbjct: 4 MKSYRLSELNNSEVESLKARPRIDFSSIFGIVNPIVDDVRQRGDAAVKDYTSRFDKVKLD 63
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
K+VENVSELPDPELDA VKEAFDVAYNNIYAFHLAQKS E SVE MKGVRCKRVARSI S
Sbjct: 64 KIVENVSELPDPELDATVKEAFDVAYNNIYAFHLAQKSVEKSVETMKGVRCKRVARSISS 123
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPP+QDGSICKEVLYCAKKAGVTHIL
Sbjct: 124 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPAQDGSICKEVLYCAKKAGVTHIL 183
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGTESCPK EKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI
Sbjct: 184 KAGGAQAISAMAWGTESCPKAEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 243
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD YASPVHIAADLLSQAEHGPDSQVVLV+ GDGVD+ AIE+EISKQCQSLPRGE+ASKA
Sbjct: 244 ADRYASPVHIAADLLSQAEHGPDSQVVLVVAGDGVDMKAIEEEISKQCQSLPRGEYASKA 303
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E +SFSNLYAPEHLI+NVK+AEKWES IENAGSVFLG WTPESVGDY
Sbjct: 304 LSHSFTVFARDMVEAVSFSNLYAPEHLIINVKEAEKWESFIENAGSVFLGPWTPESVGDY 363
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGGVSLDSF KYMTVQSLTEEGL+KLGPYVATMAE+EGL+AHKR
Sbjct: 364 ASGTNHVLPTYGYARMYGGVSLDSFQKYMTVQSLTEEGLRKLGPYVATMAEVEGLDAHKR 423
Query: 421 AVTFRLQDIEARQVSSKR 438
AVT RLQDIEARQVS+ R
Sbjct: 424 AVTLRLQDIEARQVSNTR 441
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224122154|ref|XP_002330554.1| predicted protein [Populus trichocarpa] gi|222872112|gb|EEF09243.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/438 (89%), Positives = 418/438 (95%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL++AEV+SLKARPRIDFSSIF +V+PIVDDVR RGD +VKDYT +FDKVKL+
Sbjct: 4 MKSYRLSELSNAEVESLKARPRIDFSSIFGIVNPIVDDVRQRGDDAVKDYTAKFDKVKLD 63
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
K+VENVSELPDPEL+AAV+EAFDVAY+NIYAFHLAQKS E SVENMKGVRCKRVARSIGS
Sbjct: 64 KIVENVSELPDPELEAAVREAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVARSIGS 123
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML+VPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL
Sbjct: 124 VGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 183
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGT+SC KVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI
Sbjct: 184 KAGGAQAISAMAWGTDSCLKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 243
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD YASPVHIAADLLSQAEHGPDSQVVLV+ GDGVD+ AIE+EISKQCQSLPRGE+ASKA
Sbjct: 244 ADSYASPVHIAADLLSQAEHGPDSQVVLVVAGDGVDMKAIEEEISKQCQSLPRGEYASKA 303
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E +SFSNLYAPEHLI+NVKDAEKWES IENAGSVFLG WTPESVGDY
Sbjct: 304 LSHSFTVFARDMVEAVSFSNLYAPEHLIINVKDAEKWESFIENAGSVFLGPWTPESVGDY 363
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGGVSLDSF KYMTVQSLTEEGL KLGPYVATMAE+EGL+AHKR
Sbjct: 364 ASGTNHVLPTYGYARMYGGVSLDSFQKYMTVQSLTEEGLMKLGPYVATMAEVEGLDAHKR 423
Query: 421 AVTFRLQDIEARQVSSKR 438
AVT RLQ IEARQVS+ R
Sbjct: 424 AVTLRLQGIEARQVSNTR 441
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493020|ref|XP_002264907.2| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/438 (88%), Positives = 416/438 (94%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ AEV SLKARPRIDFSSIF++VHPIVDDVR+RGDA+VKDYT RFDKV+L+
Sbjct: 125 MKSYRLSELSQAEVNSLKARPRIDFSSIFNVVHPIVDDVRSRGDAAVKDYTTRFDKVELD 184
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
+++ENV+ELPDPELDA +KEAFDVAY+NI+AFH AQKSAE VENMKGV+CKRVARSI S
Sbjct: 185 RLIENVAELPDPELDAGIKEAFDVAYDNIFAFHAAQKSAEKIVENMKGVKCKRVARSIAS 244
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDG ICKEVLYCAKKAGVTHIL
Sbjct: 245 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGGICKEVLYCAKKAGVTHIL 304
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAI+AMAWGT SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 305 KAGGAQAIAAMAWGTTSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 364
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD +A+PVHIAADLLSQAEHGPDSQVVLVI GDGVDL AIE+EISKQCQSLPRGEFASKA
Sbjct: 365 ADKHANPVHIAADLLSQAEHGPDSQVVLVIAGDGVDLRAIEEEISKQCQSLPRGEFASKA 424
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFAR+M+E ISFSNLYAPEHLI+NVKDAEKWE+ IENAGSVFLG+WTPESVGDY
Sbjct: 425 LSHSFTVFARNMVEAISFSNLYAPEHLIINVKDAEKWENFIENAGSVFLGQWTPESVGDY 484
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGG+SLDSFLKYMTVQSLTEEGL+KLGPYV MAE+EGLEAHKR
Sbjct: 485 ASGTNHVLPTYGYARMYGGLSLDSFLKYMTVQSLTEEGLRKLGPYVEAMAEVEGLEAHKR 544
Query: 421 AVTFRLQDIEARQVSSKR 438
AVT RLQDIEARQV + R
Sbjct: 545 AVTLRLQDIEARQVPNMR 562
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088118|emb|CBI35507.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/438 (88%), Positives = 416/438 (94%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ AEV SLKARPRIDFSSIF++VHPIVDDVR+RGDA+VKDYT RFDKV+L+
Sbjct: 109 MKSYRLSELSQAEVNSLKARPRIDFSSIFNVVHPIVDDVRSRGDAAVKDYTTRFDKVELD 168
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
+++ENV+ELPDPELDA +KEAFDVAY+NI+AFH AQKSAE VENMKGV+CKRVARSI S
Sbjct: 169 RLIENVAELPDPELDAGIKEAFDVAYDNIFAFHAAQKSAEKIVENMKGVKCKRVARSIAS 228
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDG ICKEVLYCAKKAGVTHIL
Sbjct: 229 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGGICKEVLYCAKKAGVTHIL 288
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAI+AMAWGT SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 289 KAGGAQAIAAMAWGTTSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 348
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD +A+PVHIAADLLSQAEHGPDSQVVLVI GDGVDL AIE+EISKQCQSLPRGEFASKA
Sbjct: 349 ADKHANPVHIAADLLSQAEHGPDSQVVLVIAGDGVDLRAIEEEISKQCQSLPRGEFASKA 408
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFAR+M+E ISFSNLYAPEHLI+NVKDAEKWE+ IENAGSVFLG+WTPESVGDY
Sbjct: 409 LSHSFTVFARNMVEAISFSNLYAPEHLIINVKDAEKWENFIENAGSVFLGQWTPESVGDY 468
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGG+SLDSFLKYMTVQSLTEEGL+KLGPYV MAE+EGLEAHKR
Sbjct: 469 ASGTNHVLPTYGYARMYGGLSLDSFLKYMTVQSLTEEGLRKLGPYVEAMAEVEGLEAHKR 528
Query: 421 AVTFRLQDIEARQVSSKR 438
AVT RLQDIEARQV + R
Sbjct: 529 AVTLRLQDIEARQVPNMR 546
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255564978|ref|XP_002523482.1| histidinol dehydrogenase, putative [Ricinus communis] gi|223537310|gb|EEF38941.1| histidinol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/434 (90%), Positives = 413/434 (95%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSELT EV SLKARPRIDFSSIFS+V+PIVD VR+RGDA+VK+YT RFDKV LE
Sbjct: 43 MKSYRLSELTRTEVDSLKARPRIDFSSIFSIVNPIVDGVRSRGDAAVKEYTARFDKVNLE 102
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
+VENVSELP+ E+DAAV+EAFDVAY+NIYAFHLAQK+AE SVENMKGVRCKRVARSI S
Sbjct: 103 NIVENVSELPEMEIDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMKGVRCKRVARSISS 162
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPP+Q+G ICKEVLYCAKKAGVTHIL
Sbjct: 163 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPTQEGIICKEVLYCAKKAGVTHIL 222
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI
Sbjct: 223 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 282
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
D ASPVHIAADLLSQAEHGPDSQVVLVIVGD V+L AIE+EISKQCQSLPRGE+ASKA
Sbjct: 283 VDSQASPVHIAADLLSQAEHGPDSQVVLVIVGDDVNLKAIEEEISKQCQSLPRGEYASKA 342
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
LGHSF+VFARDM+E ISFSNLYAPEHLIVNVKDAEKWES IENAGSVFLG WTPESVGDY
Sbjct: 343 LGHSFIVFARDMVEAISFSNLYAPEHLIVNVKDAEKWESFIENAGSVFLGPWTPESVGDY 402
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGL+ LGPYVATMAE+EGLEAHKR
Sbjct: 403 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLRNLGPYVATMAEVEGLEAHKR 462
Query: 421 AVTFRLQDIEARQV 434
AVT RLQDIEARQV
Sbjct: 463 AVTLRLQDIEARQV 476
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555910|ref|XP_003546272.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/435 (86%), Positives = 410/435 (94%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
+ SYRLS LT +E+QSLK+RPRIDFSSIFS+V+PIVDDV RGDA+VK+YT +FDKV+L+
Sbjct: 36 INSYRLSNLTPSELQSLKSRPRIDFSSIFSVVNPIVDDVHKRGDAAVKEYTSKFDKVELD 95
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
KVVE VSELPDP LD +KEAFDVAY+NIYAFH AQKS E SVENMKGV+CKRVARSI S
Sbjct: 96 KVVEVVSELPDPVLDPPIKEAFDVAYDNIYAFHAAQKSPEKSVENMKGVQCKRVARSINS 155
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML+VPAQIAGCKT+VLA PP++DG+ CKEVLYCAKKAGVTHIL
Sbjct: 156 VGLYVPGGTAVLPSTALMLAVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHIL 215
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGTE+CPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI
Sbjct: 216 KAGGAQAISAMAWGTETCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 275
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD +A P H+AADLLSQAEHGPDSQVVLVIVGDGVDL+AI++E+SKQC+SLPRGEFASKA
Sbjct: 276 ADKHAIPSHVAADLLSQAEHGPDSQVVLVIVGDGVDLNAIQEELSKQCESLPRGEFASKA 335
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF V+ARDMLE I+FSNLYAPEHLI+NVKDAEKWES IENAGSVFLG WTPESVGDY
Sbjct: 336 LSHSFFVYARDMLEAINFSNLYAPEHLIINVKDAEKWESFIENAGSVFLGPWTPESVGDY 395
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGGVSLDSFLKY+TVQSL+EEGL++LGPYVATMAE+EGLEAHKR
Sbjct: 396 ASGTNHVLPTYGYARMYGGVSLDSFLKYITVQSLSEEGLRRLGPYVATMAEVEGLEAHKR 455
Query: 421 AVTFRLQDIEARQVS 435
AVT RLQDIEARQVS
Sbjct: 456 AVTLRLQDIEARQVS 470
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435520|ref|XP_004135543.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/438 (85%), Positives = 406/438 (92%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSY+LSEL V LKARPRIDFSSIF +V PI DDVR RGDA+V+DYT +FDKV+L
Sbjct: 53 MKSYKLSELNQDAVTGLKARPRIDFSSIFGVVQPIADDVRKRGDAAVRDYTAKFDKVELN 112
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
++V +VS+LP+PELD+AVKEAFDVAY+NIYAFH AQ S E +VENM GV+CKRVARSI S
Sbjct: 113 EIVVSVSDLPEPELDSAVKEAFDVAYDNIYAFHAAQISVEKNVENMPGVKCKRVARSISS 172
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALMLS+PAQIAGC TVVLATPPSQDGSICKEVLYCAKKAGVTHIL
Sbjct: 173 VGLYVPGGTAVLPSTALMLSIPAQIAGCGTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 232
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI
Sbjct: 233 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 292
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD YASPVHIAADLLSQAEHGPDSQVVLVI GDGVD+ AIE+E+SKQC+SLPRGEFASKA
Sbjct: 293 ADKYASPVHIAADLLSQAEHGPDSQVVLVIAGDGVDVKAIEEELSKQCKSLPRGEFASKA 352
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E +SFSNLYAPEHLI+NVKDAEKWES I+NAGSVFLG WTPESVGDY
Sbjct: 353 LSHSFTVFARDMVEAVSFSNLYAPEHLIINVKDAEKWESFIQNAGSVFLGPWTPESVGDY 412
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGGVSLDSFLKYMT+QSLTEEGL+KLGPYV MAE+EGL+AHKR
Sbjct: 413 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTIQSLTEEGLRKLGPYVEKMAEVEGLDAHKR 472
Query: 421 AVTFRLQDIEARQVSSKR 438
AV+ RL+DIEAR++SS R
Sbjct: 473 AVSLRLKDIEARKISSSR 490
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449488538|ref|XP_004158076.1| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/438 (85%), Positives = 406/438 (92%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSY+LSEL V LKARPRIDFSSIF +V PI DDVR RGDA+V+DYT +FDKV+L
Sbjct: 53 MKSYKLSELNQDAVTGLKARPRIDFSSIFGVVQPIADDVRKRGDAAVRDYTAKFDKVELN 112
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
++V +VS+LP+PELD+AVKEAFDVAY+NIYAFH AQ S E +VENM GV+CKRVARSI S
Sbjct: 113 EIVVSVSDLPEPELDSAVKEAFDVAYDNIYAFHAAQISVEKNVENMPGVKCKRVARSISS 172
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALMLS+PAQIAGC TVVLATPPSQDGSICKEVLYCAKKAGVTHIL
Sbjct: 173 VGLYVPGGTAVLPSTALMLSIPAQIAGCGTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 232
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI
Sbjct: 233 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 292
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD YASPVHIAADLLSQAEHGPDSQVVLVI GDGVD+ AIE+E+SKQC+SLPRGEFASKA
Sbjct: 293 ADKYASPVHIAADLLSQAEHGPDSQVVLVIAGDGVDVKAIEEELSKQCKSLPRGEFASKA 352
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E +SFSNLYAPEHLI+NVKDAEKWES I+NAGSVFLG WTPESVGDY
Sbjct: 353 LSHSFTVFARDMVEAVSFSNLYAPEHLIINVKDAEKWESFIQNAGSVFLGPWTPESVGDY 412
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMYGGVSLDSFLKYMT+QSLTEEGL+KLGPYV MAE+EGL+AHKR
Sbjct: 413 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTIQSLTEEGLRKLGPYVEKMAEVEGLDAHKR 472
Query: 421 AVTFRLQDIEARQVSSKR 438
AV+ RL+DIEAR++SS R
Sbjct: 473 AVSLRLKDIEARKISSSR 490
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388513273|gb|AFK44698.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/434 (85%), Positives = 405/434 (93%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
+KSYRLS L+H+E+ SLK RPRIDFSSIFS+V+PIVDDV RGDA VK+YT RFDKV+L+
Sbjct: 39 IKSYRLSNLSHSELLSLKTRPRIDFSSIFSVVNPIVDDVHQRGDAVVKEYTSRFDKVELD 98
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
K+VE VSELPDP LD VKEAFDVAY+NIYAFH AQKS E SVENMKGV+CKRVARSI S
Sbjct: 99 KIVEVVSELPDPVLDPPVKEAFDVAYSNIYAFHAAQKSTEKSVENMKGVQCKRVARSINS 158
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALMLSVPAQIAGCKT+VLA PP++DG+ CKEVLYCAKKAGVTHIL
Sbjct: 159 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVLANPPTRDGTTCKEVLYCAKKAGVTHIL 218
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAISAMAWGTE+CPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 219 KAGGAQAISAMAWGTETCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 278
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD A P H+AADLLSQAEHGPDSQVVLVI GDGVDL+AI++E+SKQCQSLPRGEFASKA
Sbjct: 279 ADKNAIPSHVAADLLSQAEHGPDSQVVLVIAGDGVDLNAIQEELSKQCQSLPRGEFASKA 338
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF+V ARDMLE I+FSNLYAPEHLI+NVKDAEKWES IENAGSVFLG+WTPESVGDY
Sbjct: 339 LSHSFIVHARDMLEAITFSNLYAPEHLIINVKDAEKWESFIENAGSVFLGQWTPESVGDY 398
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMY GVSLDSFLKY+TVQSLTEEGL++LGP+VATMA++EGLEAHKR
Sbjct: 399 ASGTNHVLPTYGYARMYSGVSLDSFLKYITVQSLTEEGLRRLGPFVATMADVEGLEAHKR 458
Query: 421 AVTFRLQDIEARQV 434
AVT RLQDIEA QV
Sbjct: 459 AVTLRLQDIEAMQV 472
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|10177677|dbj|BAB11037.1| histidinol dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/435 (85%), Positives = 413/435 (94%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ ++V SLK+RPRIDFSSIF+ V+PI+D VR+ GD +VK+YTERFDKV+L
Sbjct: 33 MKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQLN 92
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
KVVE++SEL PELD+ VKEAFDVAY+NIYAFHLAQKS E SVENMKGVRCKRV+RSIGS
Sbjct: 93 KVVEDMSELSVPELDSNVKEAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVSRSIGS 152
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPPS+DGSICKEVLYCAK+AGVTHIL
Sbjct: 153 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPSKDGSICKEVLYCAKRAGVTHIL 212
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAI+AMAWGT+SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 213 KAGGAQAIAAMAWGTDSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 272
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD +ASPV+IAADLLSQAEHGPDSQVVLV+VGD VDL+AIE+EI+KQC+SLPRGEFASKA
Sbjct: 273 ADEHASPVYIAADLLSQAEHGPDSQVVLVVVGDSVDLNAIEEEIAKQCKSLPRGEFASKA 332
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E ISFSNLYAPEHLI+NVKDAEKWE +IENAGSVF+G WTPESVGDY
Sbjct: 333 LSHSFTVFARDMIEAISFSNLYAPEHLIINVKDAEKWEGLIENAGSVFIGPWTPESVGDY 392
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMY GVSLDSFLK+MTVQSLTEEGL+ LGPYVATMAEIEGL+AHKR
Sbjct: 393 ASGTNHVLPTYGYARMYSGVSLDSFLKFMTVQSLTEEGLRNLGPYVATMAEIEGLDAHKR 452
Query: 421 AVTFRLQDIEARQVS 435
AVT RL+DIEA+Q++
Sbjct: 453 AVTLRLKDIEAKQLA 467
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | ||||||
| TAIR|locus:2163946 | 466 | HDH "histidinol dehydrogenase" | 0.993 | 0.933 | 0.832 | 9.2e-194 | |
| POMBASE|SPBC1711.13 | 439 | his2 "histidinol dehydrogenase | 0.965 | 0.963 | 0.509 | 8.1e-108 | |
| ASPGD|ASPL0000057819 | 867 | AN0797 [Emericella nidulans (t | 0.965 | 0.487 | 0.512 | 1e-107 | |
| UNIPROTKB|G4MYK1 | 865 | MGG_01309 "Histidine biosynthe | 0.970 | 0.491 | 0.501 | 1.7e-107 | |
| UNIPROTKB|Q9F854 | 431 | hisD "Histidinol dehydrogenase | 0.977 | 0.993 | 0.493 | 8.6e-104 | |
| TIGR_CMR|VC_1133 | 431 | VC_1133 "histidinol dehydrogen | 0.977 | 0.993 | 0.493 | 8.6e-104 | |
| SGD|S000000535 | 799 | HIS4 "Multifunctional enzyme c | 0.942 | 0.516 | 0.494 | 1.3e-102 | |
| CGD|CAL0000622 | 838 | HIS4 [Candida albicans (taxid: | 0.970 | 0.507 | 0.482 | 9.1e-100 | |
| UNIPROTKB|Q59UT2 | 838 | HIS4 "Putative uncharacterized | 0.970 | 0.507 | 0.482 | 9.1e-100 | |
| UNIPROTKB|P06988 | 434 | hisD "HisD" [Escherichia coli | 0.945 | 0.953 | 0.479 | 5.3e-95 |
| TAIR|locus:2163946 HDH "histidinol dehydrogenase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1877 (665.8 bits), Expect = 9.2e-194, P = 9.2e-194
Identities = 362/435 (83%), Positives = 401/435 (92%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ ++V SLK+RPRIDFSSIF+ V+PI+D VR+ GD +VK+YTERFDKV+L
Sbjct: 32 MKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQLN 91
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
KVVE++SEL PELD+ VKEAFDVAY+NIYAFHLAQKS E SVENMKGVRCKRV+RSIGS
Sbjct: 92 KVVEDMSELSVPELDSNVKEAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVSRSIGS 151
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLYVPGGTAVLPSTALML++PAQIAGCKTVVLATPPS+DGSICKEVLYCAK+AGVTHIL
Sbjct: 152 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPSKDGSICKEVLYCAKRAGVTHIL 211
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
KAGGAQAI+AMAWGT+SCPKVEKIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLVI
Sbjct: 212 KAGGAQAIAAMAWGTDSCPKVEKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLVI 271
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXXAIEQEISKQCQSLPRGEFASKA 300
AD +ASPV+IAADLLSQAEHGPDSQ AIE+EI+KQC+SLPRGEFASKA
Sbjct: 272 ADEHASPVYIAADLLSQAEHGPDSQVVLVVVGDSVDLNAIEEEIAKQCKSLPRGEFASKA 331
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L HSF VFARDM+E ISFSNLYAPEHLI+NVKDAEKWE +IENAGSVF+G WTPESVGDY
Sbjct: 332 LSHSFTVFARDMIEAISFSNLYAPEHLIINVKDAEKWEGLIENAGSVFIGPWTPESVGDY 391
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGYARMY GVSLDSFLK+MTVQSLTEEGL+ LGPYVATMAEIEGL+AHKR
Sbjct: 392 ASGTNHVLPTYGYARMYSGVSLDSFLKFMTVQSLTEEGLRNLGPYVATMAEIEGLDAHKR 451
Query: 421 AVTFRLQDIEARQVS 435
AVT RL+DIEA+Q++
Sbjct: 452 AVTLRLKDIEAKQLA 466
|
|
| POMBASE|SPBC1711.13 his2 "histidinol dehydrogenase His2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 217/426 (50%), Positives = 290/426 (68%)
Query: 3 SYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKV 62
SYR + LT E L ARP + I ++V PI++DV++RG+AS+ DY +F+KV+L+
Sbjct: 10 SYRAAALTAEERTRLLARPIQNTQKIRTIVQPIIEDVKSRGEASLIDYASKFEKVQLKSA 69
Query: 63 VENVSELPD-PELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSV 121
V D ++ +KE D+A+NNI+AFH +Q +V+ M+GV C+R++R I V
Sbjct: 70 VLKAPFDDDLMKISPMIKEDIDIAFNNIFAFHSSQLRPTIAVQTMRGVVCQRMSRPINRV 129
Query: 122 GLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILK 181
GLY+PGGTAVLPSTALML VPA++AGC VV++TP +DG++ E++Y A K G I+
Sbjct: 130 GLYIPGGTAVLPSTALMLGVPAKVAGCPHVVISTPVRKDGTVAPEIVYIANKIGAEAIIL 189
Query: 182 AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVI 240
AGGAQAI+AMA+G PKV KIFGPGNQ+VTAAKM +QN A+++ID+PAGPSEVLVI
Sbjct: 190 AGGAQAIAAMAYGISGVPKVNKIFGPGNQFVTAAKMHVQNDYGALVAIDLPAGPSEVLVI 249
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXX-XXXXAIEQEISKQCQSLPRGEFASK 299
AD +P +A DLLSQAEHG DSQ I++ I+ L R
Sbjct: 250 ADETCNPESVALDLLSQAEHGLDSQIILLTVSLSPEMFDRIQKAINDHALRLSRSYIIKH 309
Query: 300 ALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGD 359
A+ S +V ++ + +SNLY PEHL++++K+A + I+NAGSVF+G W+P S+GD
Sbjct: 310 AIKKSVIVQVDNVDQAFEWSNLYGPEHLVLHLKNASSYIPKIDNAGSVFVGPWSPVSMGD 369
Query: 360 YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHK 419
YASGTNH LPTYGYA Y GVS DSFLKY+T Q LTEEG+++LGP V +AE+EGL AH
Sbjct: 370 YASGTNHTLPTYGYASSYSGVSTDSFLKYITTQELTEEGIQRLGPTVIRLAELEGLTAHA 429
Query: 420 RAVTFR 425
AV R
Sbjct: 430 DAVRVR 435
|
|
| ASPGD|ASPL0000057819 AN0797 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 223/435 (51%), Positives = 293/435 (67%)
Query: 10 THAE-VQSLKARP-RIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVS 67
T AE VQ RP + +I +V PI+ DVR +GDA V YT +F+K + V
Sbjct: 435 TPAEKVQEYLKRPSQKSNDAIVGLVKPIIQDVREQGDAGVLKYTHKFEKAT--SLTSPVL 492
Query: 68 ELPDP----ELDAAVKEAFDVAYNNIYAFHLAQKSAET--SVENMKGVRCKRVARSIGSV 121
+ P P +L V+EA DV+ +NI FH AQK + S+E M GV C R +R I V
Sbjct: 493 KAPFPAELMKLSPEVQEAIDVSISNIARFHSAQKGSNDALSMETMPGVVCSRFSRPIERV 552
Query: 122 GLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILK 181
G Y+PGGTAVLPSTA+ML VPA +AGCK +V A+PP DGSI E++Y A K G I+
Sbjct: 553 GCYIPGGTAVLPSTAMMLGVPAMVAGCKKIVFASPPRADGSITPEIVYVAHKVGAESIVL 612
Query: 182 AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAGPSEVLVI 240
AGGAQA++AMA+GTES KV+KI GPGNQ+VTAAKM++ N + A +SIDMPAGPSEVLVI
Sbjct: 613 AGGAQAVAAMAYGTESVSKVDKILGPGNQFVTAAKMLVSNDTSAGVSIDMPAGPSEVLVI 672
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXX-AIEQEISKQCQSLPRGEFASK 299
AD A+P +A+DLLSQAEHG DSQ AIE E+ + ++LPR +
Sbjct: 673 ADKAANPAFVASDLLSQAEHGVDSQVILIAIDLNEQELKAIEDEVDRHARALPRMDIVRG 732
Query: 300 ALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGD 359
+L HS RD+ E ++ SN YAPEHLI+ +++AE ++NAGSVF+G+WTPESVGD
Sbjct: 733 SLAHSVTFVVRDLDEAMALSNDYAPEHLILQIQNAEAAVEKVQNAGSVFIGQWTPESVGD 792
Query: 360 YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHK 419
Y++G NH LPTYGYA+ Y GV+L SFLK++T +LT +GL +L V T+A +EGL+AHK
Sbjct: 793 YSAGVNHSLPTYGYAKQYSGVNLGSFLKHITSSNLTADGLLRLSKTVETLAAVEGLDAHK 852
Query: 420 RAVTFRLQDIEARQV 434
RAV+ R+ ++ Q+
Sbjct: 853 RAVSIRVAAMKQEQL 867
|
|
| UNIPROTKB|G4MYK1 MGG_01309 "Histidine biosynthesis trifunctional protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 218/435 (50%), Positives = 293/435 (67%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
MK +S+ + A++Q RP S +I ++ PIVDDV GD +V YT +F+K
Sbjct: 425 MKVLDVSQSSVADIQEALKRPSQKSSDAIMKIIGPIVDDVHTNGDKAVLSYTHKFEKAT- 483
Query: 60 EKVVENVSELPDPE----LDAAVKEAFDVAYNNIYAFHLAQKSAET-SVENMKGVRCKRV 114
+ V + P PE L +A D+++ NI FH AQK + VE M GV C R
Sbjct: 484 -SLTSPVLKAPFPEEMMRLSPETAKAIDISFENIRKFHAAQKEDKPLRVETMPGVVCSRF 542
Query: 115 ARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKA 174
+R I VGLYVPGGTAVLPSTALML VPA +AGC+ +VLA+PP QDG++ E++Y A K
Sbjct: 543 SRPIERVGLYVPGGTAVLPSTALMLGVPAMVAGCQRIVLASPPRQDGTVTPEIVYVAHKV 602
Query: 175 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAG 233
G I+ AGGAQA++AMA+GTES KV+KI GPGNQ+VTAAKM++ N + A + IDMPAG
Sbjct: 603 GAESIVLAGGAQAVAAMAYGTESVTKVDKILGPGNQFVTAAKMLVSNDTNAGVGIDMPAG 662
Query: 234 PSEVLVIADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXX-AIEQEISKQCQSLP 292
PSEVLVIAD A+P +A+DLLSQAEHG DSQ AIE E+ +Q +LP
Sbjct: 663 PSEVLVIADCDANPAFVASDLLSQAEHGVDSQVVLIAVDLDEAGLKAIEDEVHRQAMALP 722
Query: 293 RGEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEW 352
R + ++ HS + R++ E + SN YAPEHLI+ +K+AE ++ NAGSVF+G+W
Sbjct: 723 RVDIVRGSIKHSITISVRNIEEAMRISNDYAPEHLILQLKNAEAVVDMVMNAGSVFIGQW 782
Query: 353 TPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEI 412
TPESVGDY++G NH LPTYGYA+ Y GV+L SF+K++T +LT +GL+ +G V +A++
Sbjct: 783 TPESVGDYSAGVNHSLPTYGYAKQYSGVNLGSFVKHITSSNLTADGLRNVGEAVMQLAKV 842
Query: 413 EGLEAHKRAVTFRLQ 427
E LEAH+RAV+ R++
Sbjct: 843 EELEAHRRAVSIRME 857
|
|
| UNIPROTKB|Q9F854 hisD "Histidinol dehydrogenase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 215/436 (49%), Positives = 279/436 (63%)
Query: 1 MKSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
M++ L+ A+ +S+ RP I + ++I + V ++ VR+ GDA++ + TE+FD+VK
Sbjct: 1 MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKP 60
Query: 60 E--KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARS 117
+V + L +K+A + AYNNI FH AQK+ VE M GV C++V R
Sbjct: 61 ASLRVSREEMDAAAARLSETMKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRP 120
Query: 118 IGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT 177
I VGLY+PGG+A LPST LML VPAQIAGC+ VVL +PP I E+LY AK +
Sbjct: 121 INKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPP----IADEILYVAKLCNID 176
Query: 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 237
+ GG QAI+AMA+GTE+ KV+KIFGPGN YVT AK + N +IDMPAGPSEV
Sbjct: 177 EVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEV 236
Query: 238 LVIADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXXAIEQEISKQCQSLPRGEFA 297
LVIAD A IAADLLSQAEHGPDSQ + + KQ + L R A
Sbjct: 237 LVIADETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQ-VTDAVQKQLKVLSRASIA 295
Query: 298 SKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESV 357
KAL S ++ A + + +S SN Y PEHLIV ++ + +++NAGS+FLG+W+PESV
Sbjct: 296 EKALASSLIIIAESLTQAVSISNYYGPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESV 355
Query: 358 GDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEA 417
GDYASGTNHVLPTYGY R Y + L F K MTVQ LT +GL+ L P V TMAE EGL+A
Sbjct: 356 GDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLLAPTVVTMAEAEGLDA 415
Query: 418 HKRAVTFRLQDIEARQ 433
HKRAVT R++ ++ Q
Sbjct: 416 HKRAVTIRVEKLQKAQ 431
|
|
| TIGR_CMR|VC_1133 VC_1133 "histidinol dehydrogenase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 215/436 (49%), Positives = 279/436 (63%)
Query: 1 MKSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
M++ L+ A+ +S+ RP I + ++I + V ++ VR+ GDA++ + TE+FD+VK
Sbjct: 1 MRTVVWQSLSEAQQESILERPAITEGANITAAVAQVIAKVRSEGDAALFELTEKFDRVKP 60
Query: 60 E--KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARS 117
+V + L +K+A + AYNNI FH AQK+ VE M GV C++V R
Sbjct: 61 ASLRVSREEMDAAAARLSETMKQALEQAYNNISKFHKAQKAQPIKVETMPGVVCEQVTRP 120
Query: 118 IGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT 177
I VGLY+PGG+A LPST LML VPAQIAGC+ VVL +PP I E+LY AK +
Sbjct: 121 INKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPP----IADEILYVAKLCNID 176
Query: 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 237
+ GG QAI+AMA+GTE+ KV+KIFGPGN YVT AK + N +IDMPAGPSEV
Sbjct: 177 EVYNLGGGQAIAAMAYGTETVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEV 236
Query: 238 LVIADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXXAIEQEISKQCQSLPRGEFA 297
LVIAD A IAADLLSQAEHGPDSQ + + KQ + L R A
Sbjct: 237 LVIADETADANFIAADLLSQAEHGPDSQVVLVTPSPVLADQ-VTDAVQKQLKVLSRASIA 295
Query: 298 SKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESV 357
KAL S ++ A + + +S SN Y PEHLIV ++ + +++NAGS+FLG+W+PESV
Sbjct: 296 EKALASSLIIIAESLTQAVSISNYYGPEHLIVQTRNPRELVPLLDNAGSIFLGDWSPESV 355
Query: 358 GDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEA 417
GDYASGTNHVLPTYGY R Y + L F K MTVQ LT +GL+ L P V TMAE EGL+A
Sbjct: 356 GDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTVQELTADGLQLLAPTVVTMAEAEGLDA 415
Query: 418 HKRAVTFRLQDIEARQ 433
HKRAVT R++ ++ Q
Sbjct: 416 HKRAVTIRVEKLQKAQ 431
|
|
| SGD|S000000535 HIS4 "Multifunctional enzyme containing phosphoribosyl-ATP pyrophosphatase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 210/425 (49%), Positives = 281/425 (66%)
Query: 14 VQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPE 73
VQ +RP S I +V+PI+++VR++G++++ +YTE+FD VKL V N P PE
Sbjct: 370 VQKALSRPIQKTSEIMHLVNPIIENVRDKGNSALLEYTEKFDGVKLSNPVLNA---PFPE 426
Query: 74 -----LDAAVKEAFDVAYNNIYAFHLAQKSAET-SVENMKGVRCKRVARSIGSVGLYVPG 127
L +KEA D++ N+ FH AQ ET VE GV C R R I VGLY+PG
Sbjct: 427 EYFEGLTEEMKEALDLSIENVRKFHAAQLPTETLEVETQPGVLCSRFPRPIEKVGLYIPG 486
Query: 128 GTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ-DGSICKEVLYCAKKAGVTHILKAGGAQ 186
GTA+LPSTALML VPAQ+A CK +V A+PP + DG + EV+Y A+K G + I+ AGGAQ
Sbjct: 487 GTAILPSTALMLGVPAQVAQCKEIVFASPPRKSDGKVSPEVVYVAEKVGASKIVLAGGAQ 546
Query: 187 AISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAGPSEVLVIADIYA 245
A++AMA+GTE+ PKV+KI GPGNQ+VTAAKM +QN ++A+ SIDMPAGPSEVLVIAD A
Sbjct: 547 AVAAMAYGTETIPKVDKILGPGNQFVTAAKMYVQNDTQALCSIDMPAGPSEVLVIADEDA 606
Query: 246 SPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXXA-IEQEISKQCQSLPRGEFASKALGHS 304
+A+DLLSQAEHG DSQ I+ + Q LPR + K + HS
Sbjct: 607 DVDFVASDLLSQAEHGIDSQVILVGVNLSEKKIQEIQDAVHNQALQLPRVDIVRKCIAHS 666
Query: 305 FMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGT 364
+V E + SN YAPEHLI+ + +A + +++NAGSVF+G +TPES GDY+SGT
Sbjct: 667 TIVLCDGYEEALEMSNQYAPEHLILQIANANDYVKLVDNAGSVFVGAYTPESCGDYSSGT 726
Query: 365 NHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAVTF 424
NH LPTYGYAR Y G + +F K++T Q++T EGL+ +G V +A+ EGL+ H+ AV
Sbjct: 727 NHTLPTYGYARQYSGANTATFQKFITAQNITPEGLENIGRAVMCVAKKEGLDGHRNAVKI 786
Query: 425 RLQDI 429
R+ +
Sbjct: 787 RMSKL 791
|
|
| CGD|CAL0000622 HIS4 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 210/435 (48%), Positives = 284/435 (65%)
Query: 3 SYRLSELT---HAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
SY+L ++ A V+ RP + I +V PI++ V++ GD ++ + T +FD VKL
Sbjct: 398 SYKLEIVSVDDAAAVERAMTRPVQKTADIMKLVLPIIEKVKSDGDKALIELTSKFDGVKL 457
Query: 60 EKVVENVSELPD-PELDAAVKEAFDVAYNNIYAFHLAQ--KSAETSVENMKGVRCKRVAR 116
+ V D ++ +K A D++ NI FH AQ K +VE GV C R A+
Sbjct: 458 DAPVLQAPFPADLMDISEEMKAAIDLSMQNIEKFHAAQLPKEKVMTVETSPGVYCSRFAK 517
Query: 117 SIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ-DGSICKEVLYCAKKAG 175
I +VGLYVPGGTAVLPSTA+ML VPA++AGCK +++A+PPS+ G + EV+Y A K G
Sbjct: 518 PIENVGLYVPGGTAVLPSTAMMLGVPAKVAGCKNIIVASPPSRATGKLTPEVVYVAHKLG 577
Query: 176 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAGP 234
I+ AGGAQA++AMA+GTES K +KI GPGNQ+VTAAKM +QN ++A+ SIDMPAGP
Sbjct: 578 AKCIVMAGGAQAVTAMAYGTESVLKCDKILGPGNQFVTAAKMYVQNDTQALCSIDMPAGP 637
Query: 235 SEVLVIADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXX-AIEQEISKQCQSLPR 293
SEVLVIAD A +A+DLLSQAEHG DSQ + + +Q + LPR
Sbjct: 638 SEVLVIADSNADADFVASDLLSQAEHGVDSQVILIGVGLSDEKLNEFQAAVERQAKVLPR 697
Query: 294 GEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKW-ESIIENAGSVFLGEW 352
+ +K L HS+++ A+ E SN YAPEHLI+ + DA + IENAGSVF+G
Sbjct: 698 KDIVAKCLAHSYILLAKTYKEAFDLSNQYAPEHLILQIDDAPSYVPDSIENAGSVFVGAL 757
Query: 353 TPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEI 412
+PES GDY+SGTNH LPTYGYAR Y GV+ +F K++T Q +TE+GL+ +G V +A +
Sbjct: 758 SPESCGDYSSGTNHTLPTYGYARQYSGVNTATFQKFITSQEVTEKGLQNIGKAVMELARV 817
Query: 413 EGLEAHKRAVTFRLQ 427
EGLEAH+RAV R++
Sbjct: 818 EGLEAHRRAVEIRME 832
|
|
| UNIPROTKB|Q59UT2 HIS4 "Putative uncharacterized protein HIS4" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 210/435 (48%), Positives = 284/435 (65%)
Query: 3 SYRLSELT---HAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKL 59
SY+L ++ A V+ RP + I +V PI++ V++ GD ++ + T +FD VKL
Sbjct: 398 SYKLEIVSVDDAAAVERAMTRPVQKTADIMKLVLPIIEKVKSDGDKALIELTSKFDGVKL 457
Query: 60 EKVVENVSELPD-PELDAAVKEAFDVAYNNIYAFHLAQ--KSAETSVENMKGVRCKRVAR 116
+ V D ++ +K A D++ NI FH AQ K +VE GV C R A+
Sbjct: 458 DAPVLQAPFPADLMDISEEMKAAIDLSMQNIEKFHAAQLPKEKVMTVETSPGVYCSRFAK 517
Query: 117 SIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ-DGSICKEVLYCAKKAG 175
I +VGLYVPGGTAVLPSTA+ML VPA++AGCK +++A+PPS+ G + EV+Y A K G
Sbjct: 518 PIENVGLYVPGGTAVLPSTAMMLGVPAKVAGCKNIIVASPPSRATGKLTPEVVYVAHKLG 577
Query: 176 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAGP 234
I+ AGGAQA++AMA+GTES K +KI GPGNQ+VTAAKM +QN ++A+ SIDMPAGP
Sbjct: 578 AKCIVMAGGAQAVTAMAYGTESVLKCDKILGPGNQFVTAAKMYVQNDTQALCSIDMPAGP 637
Query: 235 SEVLVIADIYASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXX-AIEQEISKQCQSLPR 293
SEVLVIAD A +A+DLLSQAEHG DSQ + + +Q + LPR
Sbjct: 638 SEVLVIADSNADADFVASDLLSQAEHGVDSQVILIGVGLSDEKLNEFQAAVERQAKVLPR 697
Query: 294 GEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKW-ESIIENAGSVFLGEW 352
+ +K L HS+++ A+ E SN YAPEHLI+ + DA + IENAGSVF+G
Sbjct: 698 KDIVAKCLAHSYILLAKTYKEAFDLSNQYAPEHLILQIDDAPSYVPDSIENAGSVFVGAL 757
Query: 353 TPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEI 412
+PES GDY+SGTNH LPTYGYAR Y GV+ +F K++T Q +TE+GL+ +G V +A +
Sbjct: 758 SPESCGDYSSGTNHTLPTYGYARQYSGVNTATFQKFITSQEVTEKGLQNIGKAVMELARV 817
Query: 413 EGLEAHKRAVTFRLQ 427
EGLEAH+RAV R++
Sbjct: 818 EGLEAHRRAVEIRME 832
|
|
| UNIPROTKB|P06988 hisD "HisD" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 203/423 (47%), Positives = 263/423 (62%)
Query: 12 AEVQ-SLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSEL 69
AE Q L RP I S SI V+ I+D+V+ RGD ++++Y+ +FDK + + + E+
Sbjct: 14 AEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEI 73
Query: 70 P--DPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPG 127
L +K+A VA NI FH AQK VE GVRC++V R + SVGLY+PG
Sbjct: 74 AAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPG 133
Query: 128 GTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQA 187
G+A L ST LML+ PA IAGCK VVL +PP I E+LY A+ GV + GGAQA
Sbjct: 134 GSAPLFSTVLMLATPASIAGCKKVVLCSPPP----IADEILYAAQLCGVQDVFNVGGAQA 189
Query: 188 ISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 247
I+A+A+GTES PKV+KIFGPGN +VT AK + +IDMPAGPSEVLVIAD A+P
Sbjct: 190 IAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATP 249
Query: 248 VHIAADLLSQAEHGPDSQXXXXXXXXXXXXXAIEQEISKQCQSLPRGEFASKALGHSFMV 307
+A+DLLSQAEHGPDSQ E + +Q LPR E A +AL S ++
Sbjct: 250 DFVASDLLSQAEHGPDSQVILLTPAADMARRVAEA-VERQLAELPRAETARQALNASRLI 308
Query: 308 FARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHV 367
+D+ + + SN Y PEHLI+ ++A + I +AGSVFLG+W+PES GDYASGTNHV
Sbjct: 309 VTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHV 368
Query: 368 LPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAVTFRLQ 427
LPTYGY + L F K MTVQ L++EG L + T+A E L AHK AVT R+
Sbjct: 369 LPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVN 428
Query: 428 DIE 430
++
Sbjct: 429 ALK 431
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q5NAY4 | HISX_ORYSJ | 1, ., 1, ., 1, ., 2, 3 | 0.8445 | 0.9840 | 0.9112 | yes | no |
| Q8EFB1 | HISX_SHEON | 1, ., 1, ., 1, ., 2, 3 | 0.4779 | 0.9246 | 0.9246 | yes | no |
| Q3Z0G5 | HISX_SHISS | 1, ., 1, ., 1, ., 2, 3 | 0.4787 | 0.9497 | 0.9585 | yes | no |
| Q9PM77 | HISX_CAMJE | 1, ., 1, ., 1, ., 2, 3 | 0.4685 | 0.9269 | 0.9485 | yes | no |
| Q8ABA9 | HISX_BACTN | 1, ., 1, ., 1, ., 2, 3 | 0.5024 | 0.9383 | 0.9602 | yes | no |
| Q9P777 | HISX_SCHPO | 1, ., 1, ., 1, ., 2, 3 | 0.5164 | 0.9657 | 0.9635 | yes | no |
| Q47XB8 | HISX1_COLP3 | 1, ., 1, ., 1, ., 2, 3 | 0.4622 | 0.9589 | 0.9677 | yes | no |
| Q66C49 | HISX_YERPS | 1, ., 1, ., 1, ., 2, 3 | 0.4987 | 0.9292 | 0.9187 | yes | no |
| Q6D411 | HISX_ERWCT | 1, ., 1, ., 1, ., 2, 3 | 0.4952 | 0.9223 | 0.9140 | yes | no |
| P44001 | HISX_HAEIN | 1, ., 1, ., 1, ., 2, 3 | 0.4860 | 0.9543 | 0.9789 | yes | no |
| Q4QN74 | HISX_HAEI8 | 1, ., 1, ., 1, ., 2, 3 | 0.4883 | 0.9543 | 0.9789 | yes | no |
| Q9CLM4 | HISX_PASMU | 1, ., 1, ., 1, ., 2, 3 | 0.4908 | 0.9543 | 0.9766 | yes | no |
| Q9C5U8 | HISX_ARATH | 1, ., 1, ., 1, ., 2, 3 | 0.8551 | 0.9931 | 0.9334 | yes | no |
| Q87QL1 | HISX_VIBPA | 1, ., 1, ., 1, ., 2, 3 | 0.5011 | 0.9474 | 0.9628 | yes | no |
| Q57MS3 | HISX_SALCH | 1, ., 1, ., 1, ., 2, 3 | 0.4701 | 0.9383 | 0.9470 | yes | no |
| Q9F854 | HISX_VIBCH | 1, ., 1, ., 1, ., 2, 3 | 0.5056 | 0.9657 | 0.9814 | yes | no |
| Q8PLG9 | HISX_XANAC | 1, ., 1, ., 1, ., 2, 3 | 0.4771 | 0.9223 | 0.9373 | yes | no |
| Q64RE7 | HISX_BACFR | 1, ., 1, ., 1, ., 2, 3 | 0.4902 | 0.9292 | 0.9509 | yes | no |
| Q5PDP3 | HISX_SALPA | 1, ., 1, ., 1, ., 2, 3 | 0.4677 | 0.9383 | 0.9470 | yes | no |
| Q7MLS6 | HISX_VIBVY | 1, ., 1, ., 1, ., 2, 3 | 0.5080 | 0.9748 | 0.9907 | yes | no |
| Q5E638 | HISX_VIBF1 | 1, ., 1, ., 1, ., 2, 3 | 0.4988 | 0.9794 | 0.9772 | yes | no |
| Q9PBC5 | HISX_XYLFA | 1, ., 1, ., 1, ., 2, 3 | 0.4633 | 0.9383 | 0.9535 | yes | no |
| Q8ZFX5 | HISX_YERPE | 1, ., 1, ., 1, ., 2, 3 | 0.4905 | 0.9452 | 0.9345 | yes | no |
| Q8D8Q0 | HISX_VIBVU | 1, ., 1, ., 1, ., 2, 3 | 0.5080 | 0.9748 | 0.9907 | yes | no |
| Q32EE9 | HISX_SHIDS | 1, ., 1, ., 1, ., 2, 3 | 0.4776 | 0.9474 | 0.9562 | yes | no |
| Q3BUF7 | HISX_XANC5 | 1, ., 1, ., 1, ., 2, 3 | 0.5012 | 0.8972 | 0.9118 | yes | no |
| Q2P3K3 | HISX_XANOM | 1, ., 1, ., 1, ., 2, 3 | 0.4787 | 0.9406 | 0.9559 | yes | no |
| Q65RB1 | HISX_MANSM | 1, ., 1, ., 1, ., 2, 3 | 0.4803 | 0.9703 | 0.9929 | yes | no |
| Q4UU40 | HISX_XANC8 | 1, ., 1, ., 1, ., 2, 3 | 0.4615 | 0.9680 | 0.9837 | yes | no |
| Q323J2 | HISX_SHIBS | 1, ., 1, ., 1, ., 2, 3 | 0.4752 | 0.9474 | 0.9562 | yes | no |
| Q8FG52 | HISX_ECOL6 | 1, ., 1, ., 1, ., 2, 3 | 0.4787 | 0.9497 | 0.9585 | yes | no |
| Q5LAZ8 | HISX_BACFN | 1, ., 1, ., 1, ., 2, 3 | 0.4951 | 0.9292 | 0.9509 | yes | no |
| Q5QWP8 | HISX_IDILO | 1, ., 1, ., 1, ., 2, 3 | 0.4869 | 0.9520 | 0.9434 | yes | no |
| P59401 | HISX_SHIFL | 1, ., 1, ., 1, ., 2, 3 | 0.4761 | 0.9406 | 0.9493 | yes | no |
| P62459 | HISX_PHOPR | 1, ., 1, ., 1, ., 2, 3 | 0.5080 | 0.9794 | 0.9683 | yes | no |
| P24226 | HISX_BRAOC | 1, ., 1, ., 1, ., 2, 3 | 0.8466 | 0.9977 | 0.9317 | N/A | no |
| Q87C29 | HISX_XYLFT | 1, ., 1, ., 1, ., 2, 3 | 0.4657 | 0.9383 | 0.9535 | yes | no |
| P10370 | HISX_SALTY | 1, ., 1, ., 1, ., 2, 3 | 0.4701 | 0.9383 | 0.9470 | yes | no |
| Q8P9P2 | HISX_XANCP | 1, ., 1, ., 1, ., 2, 3 | 0.4572 | 0.9589 | 0.9744 | yes | no |
| Q5H0L1 | HISX_XANOR | 1, ., 1, ., 1, ., 2, 3 | 0.4787 | 0.9406 | 0.9559 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 438 | |||
| PLN02926 | 431 | PLN02926, PLN02926, histidinol dehydrogenase | 0.0 | |
| pfam00815 | 413 | pfam00815, Histidinol_dh, Histidinol dehydrogenase | 0.0 | |
| cd06572 | 390 | cd06572, Histidinol_dh, Histidinol dehydrogenase, | 0.0 | |
| PRK00877 | 425 | PRK00877, hisD, bifunctional histidinal dehydrogen | 0.0 | |
| TIGR00069 | 393 | TIGR00069, hisD, histidinol dehydrogenase | 0.0 | |
| COG0141 | 425 | COG0141, HisD, Histidinol dehydrogenase [Amino aci | 0.0 | |
| PRK12447 | 426 | PRK12447, PRK12447, histidinol dehydrogenase; Revi | 1e-114 | |
| PRK13770 | 416 | PRK13770, PRK13770, histidinol dehydrogenase; Prov | 6e-83 | |
| PRK13769 | 368 | PRK13769, PRK13769, histidinol dehydrogenase; Prov | 1e-34 |
| >gnl|CDD|215500 PLN02926, PLN02926, histidinol dehydrogenase | Back alignment and domain information |
|---|
Score = 814 bits (2104), Expect = 0.0
Identities = 363/430 (84%), Positives = 392/430 (91%), Gaps = 2/430 (0%)
Query: 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE 60
MKSYRLSEL+ +EV SLKARPRIDFSSI V+PIV++VR+RGDA+VK+YT +FDKV L+
Sbjct: 3 MKSYRLSELSASEVDSLKARPRIDFSSILETVNPIVENVRSRGDAAVKEYTSKFDKVALD 62
Query: 61 KVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSVENMKGVRCKRVARSIG 119
VVE VS+LPDP LDA VKEAFDVAY+NIYAFHLAQKS E VE M GVRC+RVAR IG
Sbjct: 63 SVVERVSDLPDPVLDADVKEAFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIG 122
Query: 120 SVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHI 179
+VGLYVPGGTAVLPSTALML+VPAQIAGCKTVVLATPP +DGSIC EVLYCAKKAGVTHI
Sbjct: 123 AVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVTHI 182
Query: 180 LKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLV 239
LKAGGAQAI+AMAWGT+SCPKV+KIFGPGNQYVTAAKMILQNSEAM+SIDMPAGPSEVLV
Sbjct: 183 LKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLV 242
Query: 240 IADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASK 299
IAD A+PVH+AADLLSQAEHGPDSQVVLV VGD VDLDAIE+E+ KQCQSLPRGE ASK
Sbjct: 243 IADKTANPVHVAADLLSQAEHGPDSQVVLVAVGD-VDLDAIEEEVEKQCQSLPRGEIASK 301
Query: 300 ALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGD 359
ALGHSF+V ARDM E ISFSNLYAPEHLIVNV+DAE W I+NAGSVFLG WTPESVGD
Sbjct: 302 ALGHSFIVVARDMAEAISFSNLYAPEHLIVNVEDAESWLDKIDNAGSVFLGRWTPESVGD 361
Query: 360 YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHK 419
YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGL+ LGPYVA MAE+EGLEAHK
Sbjct: 362 YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLQNLGPYVARMAEVEGLEAHK 421
Query: 420 RAVTFRLQDI 429
RAVT RL DI
Sbjct: 422 RAVTLRLGDI 431
|
Length = 431 |
| >gnl|CDD|216133 pfam00815, Histidinol_dh, Histidinol dehydrogenase | Back alignment and domain information |
|---|
Score = 607 bits (1567), Expect = 0.0
Identities = 233/417 (55%), Positives = 291/417 (69%), Gaps = 9/417 (2%)
Query: 14 VQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVV---ENVSELP 70
++ L RP I V PI+++V+ GD ++ +YTE+FD V+LE + E + E
Sbjct: 1 LEKLLRRPIQKVDEILKKVKPIIENVKENGDKALLEYTEKFDGVELESLRVSAEEIEEAY 60
Query: 71 DPELDAAVKEAFDVAYNNIYAFHLAQK-SAETSVENMKGVRCKRVARSIGSVGLYVPGGT 129
+ LD ++EA +VA NI FH AQ S + VE GVRC + R I SVGLYVPGGT
Sbjct: 61 E-SLDPELREAIEVAIENIRKFHAAQMPSKDLDVETQPGVRCGQKVRPIESVGLYVPGGT 119
Query: 130 AVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAIS 189
AV PST LML VPA++AGCK +VL +PP +DG + E+LY A AGV I KAGGAQAI+
Sbjct: 120 AVYPSTVLMLVVPAKVAGCKKIVLCSPPPKDGKVNPEILYAAHIAGVDEIYKAGGAQAIA 179
Query: 190 AMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249
AMA+GTE+ PKV+KIFGPGN YVTAAK ++ ++ IDMPAGPSEVLVIAD A P
Sbjct: 180 AMAYGTETVPKVDKIFGPGNIYVTAAKRLVSG---LVDIDMPAGPSEVLVIADETADPDF 236
Query: 250 IAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFA 309
+A+DLLSQAEH PDSQVVLV + + + +E+E+ +Q + LPR E KAL HS +V
Sbjct: 237 VASDLLSQAEHDPDSQVVLVTDSEEL-AEEVEEEVERQLEQLPRKEIVRKALAHSAIVLV 295
Query: 310 RDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLP 369
+D+ E I FSN YAPEHLI+ K+AEK I+NAGS+FLG ++PES GDYASGTNHVLP
Sbjct: 296 KDLEEAIEFSNQYAPEHLIIQTKNAEKLLGKIKNAGSIFLGAYSPESAGDYASGTNHVLP 355
Query: 370 TYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAVTFRL 426
TYGYAR Y G+S+ FLK +TVQ LTEEGLK + V T+AE EGLEAH AV RL
Sbjct: 356 TYGYARQYSGLSVADFLKRITVQELTEEGLKNVAETVMTLAEAEGLEAHAEAVRIRL 412
|
Length = 413 |
| >gnl|CDD|119329 cd06572, Histidinol_dh, Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Score = 585 bits (1510), Expect = 0.0
Identities = 204/390 (52%), Positives = 266/390 (68%), Gaps = 7/390 (1%)
Query: 32 VHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNI 89
V I++DVR RGD ++ +YTE+FD V+LE + + E+ +D +KEA ++A NI
Sbjct: 5 VREIIEDVRERGDEALLEYTEKFDGVELESLRVSEEEIDAAYAAVDPELKEAIELAAENI 64
Query: 90 YAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCK 149
AFH AQ + VE GV + R I VGLYVPGGTA PST LML++PA++AG K
Sbjct: 65 RAFHEAQLPKDWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVK 124
Query: 150 TVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGN 209
+V+ TPP +DG I +L AK AGV I K GGAQAI+A+A+GTE+ PKV+KI GPGN
Sbjct: 125 EIVVVTPPRKDGKINPAILAAAKLAGVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGN 184
Query: 210 QYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLV 269
YVTAAK ++ + IDMPAGPSEVLVIAD A+P +AADLLSQAEH PDSQ +LV
Sbjct: 185 IYVTAAKRLVSGD---VGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDSQAILV 241
Query: 270 IVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYAPEHLI 328
+A+E+E+ +Q LPR E A+K+L + ++ D+ E I +N YAPEHL
Sbjct: 242 TT-SEELAEAVEEEVERQLAELPRREIAAKSLLDYGAIILVDDLEEAIELANEYAPEHLE 300
Query: 329 VNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKY 388
+ +D E+ I NAGS+FLG +TPE++GDYA+G NHVLPT G AR Y G+S+D FLK
Sbjct: 301 LQTEDPEELLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKR 360
Query: 389 MTVQSLTEEGLKKLGPYVATMAEIEGLEAH 418
+TVQ ++EGL+ L P VAT+AE EGLEAH
Sbjct: 361 ITVQEYSKEGLRALAPAVATLAEAEGLEAH 390
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. Length = 390 |
| >gnl|CDD|234853 PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 570 bits (1471), Expect = 0.0
Identities = 207/432 (47%), Positives = 271/432 (62%), Gaps = 20/432 (4%)
Query: 4 YRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVV 63
LS +L R R D + + V I++DVR RGDA++ +YTE+FD V+LE +
Sbjct: 5 RWLSLSDAEFRAALPRRAREDDEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESL- 63
Query: 64 ENVSELPDPELDAA-------VKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVAR 116
+ + E++AA ++EA + A NI AFH AQK VE GVR + R
Sbjct: 64 ----RVSEEEIEAAYERLDPELREALEEAAENIRAFHEAQKPESWDVETAPGVRLGQRWR 119
Query: 117 SIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV 176
I VGLYVPGG A PS+ LM ++PA++AG K +V+ TPP DG I +L A AGV
Sbjct: 120 PIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP-PDGEINPAILAAAALAGV 178
Query: 177 THILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSE 236
+ K GGAQAI+A+A+GTES PKV+KI GPGN YVTAAK ++ + IDM AGPSE
Sbjct: 179 DEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGV---VGIDMIAGPSE 235
Query: 237 VLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDL-DAIEQEISKQCQSLPRGE 295
+LVIAD A P +AADLLSQAEH PD+Q +LV +L +A+ E+ +Q +LPR E
Sbjct: 236 ILVIADETADPDFVAADLLSQAEHDPDAQSILVT--TSEELAEAVAAEVERQLATLPRAE 293
Query: 296 FASKAL-GHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTP 354
A +L G ++ D+ E I SN YAPEHL + +D I NAG++FLG +TP
Sbjct: 294 IARASLEGQGAIILVDDLEEAIELSNAYAPEHLEIQTEDPRALLDRIRNAGAIFLGPYTP 353
Query: 355 ESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEG 414
ES+GDYA+G NHVLPT G AR G+S+ FLK +V L++EGLK LGP + T+AE EG
Sbjct: 354 ESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVIELSKEGLKALGPAIVTLAEAEG 413
Query: 415 LEAHKRAVTFRL 426
L+AH RAV RL
Sbjct: 414 LDAHARAVRVRL 425
|
Length = 425 |
| >gnl|CDD|232808 TIGR00069, hisD, histidinol dehydrogenase | Back alignment and domain information |
|---|
Score = 539 bits (1392), Expect = 0.0
Identities = 202/402 (50%), Positives = 267/402 (66%), Gaps = 17/402 (4%)
Query: 32 VHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAA-------VKEAFDV 84
V I++DVR RGD ++ +YTE+FD V L+ + + + E++AA +KEA ++
Sbjct: 1 VKDIIEDVRARGDEALLEYTEKFDGVTLDSL-----RVSEEEIEAAYAAVDPELKEALEL 55
Query: 85 AYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQ 144
A NI AFH AQ VE GV + R + VGLYVPGG A PST LM ++PA+
Sbjct: 56 AAENIRAFHEAQLPRSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAK 115
Query: 145 IAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKI 204
+AG K +V+ TPP +DG I VL AK AGV + K GGAQAI+A+A+GTE+ PKV+KI
Sbjct: 116 VAGVKEIVVCTPPGKDGKINPAVLAAAKLAGVDEVYKVGGAQAIAALAYGTETVPKVDKI 175
Query: 205 FGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDS 264
GPGN YVTAAK ++ + IDMPAGPSEVLVIAD A+P +AADLLSQAEH PD+
Sbjct: 176 VGPGNIYVTAAKKLVF---GDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDA 232
Query: 265 QVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYA 323
Q +LV + + +A+++EI +Q +LPR E A K+L + ++ D+ E I SN YA
Sbjct: 233 QAILVTTSEEL-AEAVQEEIERQLATLPRREIARKSLEDNGAIILVDDLEEAIEISNDYA 291
Query: 324 PEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLD 383
PEHL + K+ E+ I NAGS+FLG +TPE+ GDYA+G NHVLPT G AR Y G+S+
Sbjct: 292 PEHLELQTKNPEELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVL 351
Query: 384 SFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAVTFR 425
FLK +TVQ L++EGL +L P V T+AE EGLEAH +V R
Sbjct: 352 DFLKRITVQRLSKEGLAELAPAVETLAEAEGLEAHANSVRIR 393
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein [Amino acid biosynthesis, Histidine family]. Length = 393 |
| >gnl|CDD|223219 COG0141, HisD, Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 532 bits (1373), Expect = 0.0
Identities = 205/432 (47%), Positives = 272/432 (62%), Gaps = 20/432 (4%)
Query: 9 LTHAEVQSLKARPRIDFSSI--FSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENV 66
LT RPR + V PI++DV+ RGDA++ +YT +FD V+ + +
Sbjct: 4 LTTQSPDFALLRPRRSVEEVIEVRTVRPIIEDVKERGDAALLEYTAKFDGVEPDNL---- 59
Query: 67 SELPDPELDAA-------VKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIG 119
+ E+DAA VKEA +VA NI AFH AQ + VE GV + R I
Sbjct: 60 -RVSAAEIDAAYQRLDPEVKEALEVAAENIEAFHEAQLPKDWLVETEPGVVLGQRWRPIE 118
Query: 120 SVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHI 179
VGLYVPGG A PST LM +VPA++AG + +V+ TPP +DG + E+L A+ AGV +
Sbjct: 119 RVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDEV 177
Query: 180 LKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLV 239
K GGAQAI+A+A+GTE+ PKV+KI GPGN YVTAAK ++ + IDM AGPSEVLV
Sbjct: 178 YKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSGV---VGIDMIAGPSEVLV 234
Query: 240 IADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASK 299
IAD A+P +AADLLSQAEH PD+Q +LV + + +A+E + +Q ++LPR E A K
Sbjct: 235 IADETANPDFVAADLLSQAEHDPDAQAILVTDSEEL-AEAVEAAVERQLETLPRAEIARK 293
Query: 300 ALGHSFMVF-ARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVG 358
AL + + D+ E + SN YAPEHL + ++ + I NAGS+FLG ++PES+G
Sbjct: 294 ALENYGAIILVDDLDEAVEISNEYAPEHLELQTENPRELLGKIRNAGSIFLGHYSPESLG 353
Query: 359 DYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAH 418
DYA+G NHVLPT G AR G+S+ FLK TVQ L+EEGL +L V T+AE EGL AH
Sbjct: 354 DYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTVQELSEEGLARLAETVITLAEAEGLTAH 413
Query: 419 KRAVTFRLQDIE 430
AV RL+ +E
Sbjct: 414 AEAVRIRLERLE 425
|
Length = 425 |
| >gnl|CDD|237103 PRK12447, PRK12447, histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-114
Identities = 156/427 (36%), Positives = 228/427 (53%), Gaps = 29/427 (6%)
Query: 15 QSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPEL 74
+SL+ R D S + V I+ D+ RGDA+V++Y+ +FDK L E+
Sbjct: 10 KSLEKRAETD-SKVRETVEAILADIEARGDAAVREYSRKFDKWSPGSFR-----LSAAEI 63
Query: 75 DAA-------VKEAFDVAYNNIYAFHLAQKSA--ETSVENMKGVRCKRVARSIGSVGLYV 125
DAA VKE A + + F AQ+ + + VE + GV + SVG YV
Sbjct: 64 DAAVAKVPEQVKEDIRFAQDQVRRFAEAQRDSLQDLEVETLPGVILGHRNIPVNSVGCYV 123
Query: 126 PGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGA 185
PGG L ++A M + A++AG K V+ TPP G ++ AG I GG
Sbjct: 124 PGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFP-GEPPPAIVAAMHLAGADEIYVLGGV 182
Query: 186 QAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYA 245
QA++AMA+GTE+ V+ + GPGN YV AK L + ID+ AGP+E LVIAD A
Sbjct: 183 QAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLF---GRVGIDLFAGPTETLVIADDTA 239
Query: 246 SPVHIAADLLSQAEHGPDSQVVLVI----VGDGVDLDAIEQEISKQCQSLPRGEFASKAL 301
P +A DLL QAEHGP+S VL+ + + V L IE+ ++ LP + AS A
Sbjct: 240 DPELVATDLLGQAEHGPNSPAVLITTSRKLAEEV-LAEIERLLAI----LPTADVASAAW 294
Query: 302 -GHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
+ ++ D+ E ++ ++ YA EH+ V +D + + + N G++FLGE T + GD
Sbjct: 295 RDYGEVILCDDLEEMVAEADRYASEHVQVMTEDPDWFLENMTNYGALFLGERTNVAYGDK 354
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
GTNHVLPT G AR GG+ + FLK +T Q +T+E ++G Y + + +EG E H R
Sbjct: 355 VIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQRVTDEASAEIGEYCSRLCRLEGFEGHAR 414
Query: 421 AVTFRLQ 427
R++
Sbjct: 415 QADIRVR 421
|
Length = 426 |
| >gnl|CDD|172308 PRK13770, PRK13770, histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (666), Expect = 6e-83
Identities = 131/402 (32%), Positives = 220/402 (54%), Gaps = 10/402 (2%)
Query: 27 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDV 84
S++ ++ I +V+ GD ++K Y FD K + + + ++ LD K+A
Sbjct: 20 SLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQ 79
Query: 85 AYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQ 144
+Y I A+ + K +T+ + + V C + + SVG+YVPGG A PST LM + AQ
Sbjct: 80 SYERIKAYQESIK--QTNQQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQ 137
Query: 145 IAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKI 204
+AG + +V+ TPP +G + +EVL V + + GGAQ+I+A+ +GTE+ PKV+KI
Sbjct: 138 VAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQVFQVGGAQSIAALTYGTETIPKVDKI 196
Query: 205 FGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDS 264
GPGNQ+V AK L + ID AGP+E+ +I D A I D+ +QAEH +
Sbjct: 197 VGPGNQFVAYAKKYLF---GQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHDELA 253
Query: 265 QVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYA 323
+ VI D L +E I+K ++ R + SK++ +++ A + E N A
Sbjct: 254 RT-YVISEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIA 312
Query: 324 PEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLD 383
PEH + + + + ++ G++F+G ++PE +GDY +G +HVLPT AR G+S++
Sbjct: 313 PEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVN 372
Query: 384 SFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAVTFR 425
FL TV L+++ +++ +A +E L H++++ R
Sbjct: 373 DFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIR 414
|
Length = 416 |
| >gnl|CDD|172307 PRK13769, PRK13769, histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 1e-34
Identities = 117/394 (29%), Positives = 178/394 (45%), Gaps = 41/394 (10%)
Query: 32 VHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEA---FDVAYNN 88
V IVDDV RG + +Y+ER D V E + DP + AA EA + Y+
Sbjct: 13 VEKIVDDVAERGLQAALEYSERLDGVAPEAALVEPRPGGDPAVVAAALEAAKSLEALYSR 72
Query: 89 IYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGC 148
+ +V+ GV + + LYVP A ST +ML+VPA+ AG
Sbjct: 73 L--------KPPEAVDFYGGVLRSVFWKPVRRAALYVP---ARYVSTLVMLAVPARAAGV 121
Query: 149 KTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPG 208
+ + + TPP + E+L AK+ GV +L GG ++ + V+ + GPG
Sbjct: 122 EEIYVVTPPR---GVTGELLAVAKELGVKGVLAIGGPHGLAYAVFHM----GVDMVAGPG 174
Query: 209 NQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVL 268
YV AAK +L + ID GP+E++V A+ P L+Q EHGP S
Sbjct: 175 GLYVQAAKYVLSQ---YVGIDGIEGPTELVVYAEGVP-PEVAVRGALAQLEHGPTS-FAY 229
Query: 269 VIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGISFSNLYAPEHLI 328
++ D L A E EI ++ ++ G + + + E + F + APEHL
Sbjct: 230 LLSTDAELLKAAE-EIYRRERTSSMGPLEVRKVA--------GVEEAVRFIDEIAPEHL- 279
Query: 329 VNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKY 388
V + + N G+V + P DY +G +HVLPT G AR G ++ +F+K
Sbjct: 280 -EVWGRREVAYRVRNVGAVSVN--MPSPYLDYVAGISHVLPTGGTARWRGIITPLTFMKP 336
Query: 389 MTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAV 422
+ V G +L +AE EG + H+ A+
Sbjct: 337 IGVAEAV--GELELAEAARRLAEYEGFQYHREAL 368
|
Length = 368 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 438 | |||
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 100.0 | |
| PLN02926 | 431 | histidinol dehydrogenase | 100.0 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 100.0 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 100.0 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 100.0 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 100.0 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 100.0 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 100.0 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 100.0 | |
| KOG2697 | 446 | consensus Histidinol dehydrogenase [Amino acid tra | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 97.9 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 97.85 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 97.17 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 96.97 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 96.93 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 96.85 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 96.8 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 96.78 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 96.77 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 96.75 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 96.74 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 96.73 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 96.69 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 96.61 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 96.59 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 96.58 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 96.58 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 96.55 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 96.54 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 96.53 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 96.45 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 96.44 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 96.41 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 96.29 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 96.19 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 96.18 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 96.17 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 96.16 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 96.15 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 96.01 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 95.96 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 95.94 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 95.83 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 95.73 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 95.73 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 95.7 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 95.67 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 95.67 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 95.67 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 95.65 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 95.43 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 95.4 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 95.36 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 95.36 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 95.36 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 95.3 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 95.23 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 95.06 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 94.93 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 94.82 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 94.76 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 94.67 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 94.58 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 94.25 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 94.19 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 94.06 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 94.03 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 93.93 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 93.78 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 93.73 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 93.67 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 93.62 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 93.53 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 93.05 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 93.03 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 92.91 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 92.74 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 92.11 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 91.99 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 91.44 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 91.04 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 90.8 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 90.76 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 90.65 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 90.51 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 90.43 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 89.93 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 89.47 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 89.23 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 88.69 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 88.54 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 87.9 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 87.76 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 87.43 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 87.06 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 86.7 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 85.53 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 85.1 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 84.06 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 83.17 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 82.34 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 81.44 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 81.28 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 80.72 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 80.68 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 80.24 |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-167 Score=1276.40 Aligned_cols=421 Identities=49% Similarity=0.744 Sum_probs=405.2
Q ss_pred CeEEEcCCCCHHHHHHHhcCCC-CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHH
Q 013679 1 MKSYRLSELTHAEVQSLKARPR-IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAA 77 (438)
Q Consensus 1 m~~~~~~~~~~~~~~~~l~R~~-~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~ 77 (438)
|+++++......++...+.|+. .+..++.+.|++||++||++||+||++||+|||++++++|+||++||++| .+|++
T Consensus 1 ~~~i~~~~~~~~~~~~~l~r~~~~~~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~Vs~~ei~~A~~~v~~~ 80 (425)
T PRK00877 1 MIIIRWLSLSDAEFRAALPRRAREDDEDVEAAVREILEDVRERGDAALLEYTEKFDGVELESLRVSEEEIEAAYERLDPE 80 (425)
T ss_pred CcceeccccChHHHHHHhcCccccchHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHhcCCHH
Confidence 4555665555666666676664 55778999999999999999999999999999999989999999999988 99999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCC
Q 013679 78 VKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 78 ~~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
+++||++|++||++||++|+|++|..+..+|+++||+|+||+|||||||||+++|||||||++||||||||++|||||||
T Consensus 81 ~~~ai~~A~~~I~~Fh~~q~~~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 81 LREALEEAAENIRAFHEAQKPESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 99999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceE
Q 013679 158 SQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEV 237 (438)
Q Consensus 158 ~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEv 237 (438)
+ +|++||.+|+||++|||+|||++|||||||||||||||||||||||||||+||++|||+|++ .|||||+|||||+
T Consensus 161 ~-~g~i~p~vL~AA~~~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEv 236 (425)
T PRK00877 161 P-DGEINPAILAAAALAGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG---VVGIDMIAGPSEI 236 (425)
T ss_pred C-CCCCCHHHHHHHHHcCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC---CcCcCCCCCCcee
Confidence 6 99999999999999999999999999999999999999999999999999999999998865 4999999999999
Q ss_pred EEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcC-CeEEEeCCHHHHH
Q 013679 238 LVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGH-SFMVFARDMLEGI 316 (438)
Q Consensus 238 lIiAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~-g~ii~v~~l~ea~ 316 (438)
+||||++|||+|||+||||||||||+|++||||+|++|+ ++|+++|++||+.|||++|+++||++ |.+++|+|+|||+
T Consensus 237 lViAD~~Anp~~vAaDLLaQAEHd~~a~aiLvT~s~~la-~~V~~~v~~ql~~l~r~~ia~~sl~~~g~iivv~~leeai 315 (425)
T PRK00877 237 LVIADETADPDFVAADLLSQAEHDPDAQSILVTTSEELA-EAVAAEVERQLATLPRAEIARASLEGQGAIILVDDLEEAI 315 (425)
T ss_pred EEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999996 99999999999999999999999985 9999999999999
Q ss_pred HHhhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCH
Q 013679 317 SFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTE 396 (438)
Q Consensus 317 ~~~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~ 396 (438)
+++|+||||||||+++|||+++++|+|||+||||+|||+++|||++||||||||+|+|||+|||||+||||++|+|++|+
T Consensus 316 ~~~N~~APEHLel~~~~p~~~l~~I~nAGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s~ 395 (425)
T PRK00877 316 ELSNAYAPEHLEIQTEDPRALLDRIRNAGAIFLGPYTPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSSVIELSK 395 (425)
T ss_pred HHHHhhChHheeehhCCHHHHHhhcCccceeccCCCCchhhhhcccCCCcccCCCcceeecCCccHHHhccceeEEEECH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHhhCCHHHHHHHHHHH
Q 013679 397 EGLKKLGPYVATMAEIEGLEAHKRAVTFRL 426 (438)
Q Consensus 397 ~~~~~~~~~~~~lA~~EGL~aHa~sv~~R~ 426 (438)
++++++++++.+||++|||++|++|+++|+
T Consensus 396 ~~l~~l~~~~~~lA~~EGL~aHa~sv~~R~ 425 (425)
T PRK00877 396 EGLKALGPAIVTLAEAEGLDAHARAVRVRL 425 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhcC
Confidence 999999999999999999999999999995
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-165 Score=1260.61 Aligned_cols=427 Identities=84% Similarity=1.268 Sum_probs=411.2
Q ss_pred CeEEEcCCCCHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHH
Q 013679 1 MKSYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKE 80 (438)
Q Consensus 1 m~~~~~~~~~~~~~~~~l~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ 80 (438)
||.++|..+...++.+++.|+..+..++.+.|++||++||++||+||++|++|||++++++|+||++|+....+|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~v~~~e~A~~~l~~~~~~ 82 (431)
T PLN02926 3 MKSYRLSELSASEVDSLKARPRIDFSSILETVNPIVENVRSRGDAAVKEYTSKFDKVALDSVVERVSDLPDPVLDADVKE 82 (431)
T ss_pred ceEeecccCCHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCcccceeCHHHHHHhcCCHHHHH
Confidence 78999999888888888998765577899999999999999999999999999999988899999999922299999999
Q ss_pred HHHHHHHHHHHHHHhccCCCc-eEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAET-SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQ 159 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~-~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~ 159 (438)
||+.|++||++||++|+|++| .++..+|+++||+|+||+|||||||||++|||||+||++||||||||++|||||||++
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~ 162 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRK 162 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCc
Confidence 999999999999999999877 7756899999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEE
Q 013679 160 DGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLV 239 (438)
Q Consensus 160 ~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlI 239 (438)
+|++||.+|+||++|||||||++|||||||||||||||||||||||||||+||++|||+|++..|.|||||+||||||+|
T Consensus 163 ~g~i~p~iL~AA~~~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~~~~VgID~~AGPSEvlI 242 (431)
T PLN02926 163 DGSICPEVLYCAKKAGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNSEAMVSIDMPAGPSEVLV 242 (431)
T ss_pred CCCCCHHHHHHHHHcCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCCCCccccCCCCCCceeEE
Confidence 88999999999999999999999999999999999999999999999999999999998876223399999999999999
Q ss_pred EecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHHHHHh
Q 013679 240 IADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGISFS 319 (438)
Q Consensus 240 iAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea~~~~ 319 (438)
|||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||++|||++++++||++|.+++|+|+|||++++
T Consensus 243 iAD~tA~p~~vAaDLLaQAEHdp~a~aiLvT~s~~la-~~V~~~v~~ql~~l~r~~i~~~sl~~g~iivv~~l~ea~~~~ 321 (431)
T PLN02926 243 IADKTANPVHVAADLLSQAEHGPDSQVVLVAVGDVDL-DAIEEEVEKQCQSLPRGEIASKALGHSFIVVARDMAEAISFS 321 (431)
T ss_pred EeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999996 999999999999999999999999999999999999999999
Q ss_pred hhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHH
Q 013679 320 NLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGL 399 (438)
Q Consensus 320 N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~ 399 (438)
|+||||||||+++|||+|+++|+|||+||||+|||+++|||++||||||||+|+|||+|||||+||||++|+|++|++++
T Consensus 322 N~~APEHLei~~~~~~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~l 401 (431)
T PLN02926 322 NLYAPEHLIVNVEDAESWLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGL 401 (431)
T ss_pred HhhChHhheehhcCHHHHHhhcCccceeccCCCCchhhhccccCcCcccCCCcceeecCCCcHHHhcceeeEEEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHhhCCHHHHHHHHHHHHh
Q 013679 400 KKLGPYVATMAEIEGLEAHKRAVTFRLQD 428 (438)
Q Consensus 400 ~~~~~~~~~lA~~EGL~aHa~sv~~R~~~ 428 (438)
+++++++.+||++|||++|++|+++|+++
T Consensus 402 ~~l~~~~~~lA~~EGL~aHa~sv~~R~~~ 430 (431)
T PLN02926 402 QNLGPYVARMAEVEGLEAHKRAVTLRLGD 430 (431)
T ss_pred HHHHHHHHHHHHhcCChHHHHHHHHhhhc
Confidence 99999999999999999999999999864
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-166 Score=1264.77 Aligned_cols=408 Identities=50% Similarity=0.769 Sum_probs=326.5
Q ss_pred HHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHH
Q 013679 16 SLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFH 93 (438)
Q Consensus 16 ~~l~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~~~ai~~A~~nI~~fh 93 (438)
+++.|+..+.+++.++|++||++||++||+||++|++|||++++++|+||++||++| ++|+++++||++|++||++||
T Consensus 2 ~ll~R~~~~~~~v~~~V~~Il~dVr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~l~~~~~~Ai~~A~~~I~~fh 81 (412)
T PF00815_consen 2 KLLKRSALDDSEVEETVREILEDVRERGDKALLEYTKKFDGVELESLRVSEEEIAAAYAKLDPELREAIEQAAENIRAFH 81 (412)
T ss_dssp HHT--------HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--SSSB--HHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred chhcCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCccccEecHHHHHhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 577888788889999999999999999999999999999999999999999999988 899999999999999999999
Q ss_pred HhccCC-CceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHH
Q 013679 94 LAQKSA-ETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAK 172 (438)
Q Consensus 94 ~~q~~~-~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~ 172 (438)
++|+|. +|.++..+|+++||||+||+|||||||||++|||||+||++||||||||++|||||||++||++||.+|+||+
T Consensus 82 ~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~ 161 (412)
T PF00815_consen 82 EAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAH 161 (412)
T ss_dssp HTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHH
T ss_pred HHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHH
Confidence 999975 6788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 173 KAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 173 l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
+|||+|||++|||||||||||||||||||||||||||+||++|||+|++ .|||||+||||||+||||++|||+|||+
T Consensus 162 ~~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEv~ViAD~~A~p~~vAa 238 (412)
T PF00815_consen 162 LAGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG---DVGIDMIAGPSEVLVIADETANPEFVAA 238 (412)
T ss_dssp HTT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH---S-EES------EEEEEE-TTS-HHHHHH
T ss_pred HcCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC---CcccCCCCCCCceEEEECCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999998865 3999999999999999999999999999
Q ss_pred hhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHHHHHhhhhccccceeccc
Q 013679 253 DLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVK 332 (438)
Q Consensus 253 DLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea~~~~N~~APEHLel~~~ 332 (438)
||||||||||+|++||||+|++++ ++|.++|++||++|||++|+++||++|.+++|+|++||++++|+||||||||+++
T Consensus 239 DLLaQAEHd~~a~~vLvt~s~~la-~~V~~~v~~~l~~l~r~~i~~~sl~~g~ii~~~~l~ea~~~~N~~APEHLel~~~ 317 (412)
T PF00815_consen 239 DLLAQAEHDPDAQAVLVTTSEELA-EAVEAEVERQLEELPRREIAEKSLENGAIIVVDSLEEAIELANEYAPEHLELQVE 317 (412)
T ss_dssp HHHHHHTT-TT-EEEEEES-HHHH-HHHHHHHHHHHTT-TTHHHHHHHHTT-EEEE-SSHHHHHHHHHHH--SEEEEEST
T ss_pred HHHHHhccCCCCceEEEECCHHHH-HHHHHHHHHHHHhCCchHHHHHHHHCCeEEEECCHHHHHHHHHHhhHHHHHHHHc
Confidence 999999999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHHHh
Q 013679 333 DAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEI 412 (438)
Q Consensus 333 ~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~ 412 (438)
||++|+++|+|||+||||+|||+++|||++||||||||+|+|||+|||||+||||++|+|++|+++++++++++.+||++
T Consensus 318 ~~~~~~~~i~~AGaiFlG~~tp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~ 397 (412)
T PF00815_consen 318 DPEELLEKIRNAGAIFLGEYTPEALGDYAAGPNHVLPTGGTARFSSGLSVDDFLKRISVQRYSKEGLKKLAPAVARLAEA 397 (412)
T ss_dssp THHHHGGG--S-SEEEESTT--HHHHHHTSSS------TTGGGT---S-GGGGEEEEEEEEE-HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhhccChhhcCCCCCHHHhhhccCCCccCCCCccccccCCCcHHHccceeeEEEECHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHHHHH
Q 013679 413 EGLEAHKRAVTFRLQ 427 (438)
Q Consensus 413 EGL~aHa~sv~~R~~ 427 (438)
|||.+|++|+++|++
T Consensus 398 EGL~aHa~sv~~R~e 412 (412)
T PF00815_consen 398 EGLEAHARSVRIRLE 412 (412)
T ss_dssp TT-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcC
Confidence 999999999999985
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-165 Score=1253.60 Aligned_cols=407 Identities=49% Similarity=0.761 Sum_probs=394.3
Q ss_pred HhcCCCCC---chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHH
Q 013679 17 LKARPRID---FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYA 91 (438)
Q Consensus 17 ~l~R~~~~---~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~~~ai~~A~~nI~~ 91 (438)
.+.|.... ..++ ++|++||++||.+||+||++||+|||++++++++||++||++| ++|+++++||++|++|||+
T Consensus 12 ~l~r~~~~~~~~~~~-~~V~~Ii~~Vk~~GD~Al~eyt~~FD~~~~~~l~Vs~~ei~aA~~~v~~~~~eai~~A~~~I~~ 90 (425)
T COG0141 12 ALLRPRRSVEEVIEV-RTVRPIIEDVKERGDAALLEYTAKFDGVEPDNLRVSAAEIDAAYQRLDPEVKEALEVAAENIEA 90 (425)
T ss_pred hhcccccccccccch-hhHHHHHHHHHHhHHHHHHHHHHHccCCCccccccCHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 45554333 3344 7899999999999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHH
Q 013679 92 FHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCA 171 (438)
Q Consensus 92 fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA 171 (438)
||++|+|++|..+..+|++|||+|+||+|||||||||+|+||||+|||+||||||||++|||||||.+|| +||++|+||
T Consensus 91 fH~~Q~p~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA 169 (425)
T COG0141 91 FHEAQLPKDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAA 169 (425)
T ss_pred HHHhhCCCccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHH
Q 013679 172 KKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 251 (438)
Q Consensus 172 ~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vA 251 (438)
++|||++||++|||||||||||||||||||||||||||+|||+|||+|++ .|+|||+|||||||||||++|||+|||
T Consensus 170 ~~~Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g---~V~ID~~AGPSEvlViAD~ta~p~~vA 246 (425)
T COG0141 170 RLAGVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG---VVGIDMIAGPSEVLVIADETANPDFVA 246 (425)
T ss_pred HHhCcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC---CcccCCCCCCceEEEEeCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999998876 499999999999999999999999999
Q ss_pred HhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEEeCCHHHHHHHhhhhccccceec
Q 013679 252 ADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYAPEHLIVN 330 (438)
Q Consensus 252 aDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~v~~l~ea~~~~N~~APEHLel~ 330 (438)
+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+ +|.||+|+|++||++++|+||||||+|+
T Consensus 247 ~DLLsQAEHd~~a~aiLvT~s~~la-~~v~~~v~~~l~~l~~~ei~~~~l~~~g~iilv~~l~ea~~~~N~~APEHLei~ 325 (425)
T COG0141 247 ADLLSQAEHDPDAQAILVTDSEELA-EAVEAAVERQLETLPRAEIARKALENYGAIILVDDLDEAVEISNEYAPEHLELQ 325 (425)
T ss_pred HHHHHHhhcCCCceEEEEeCcHHHH-HHHHHHHHHHHHhccHHHHHHHHHHhCCeEEEECCHHHHHHHHHhhChHhhhhh
Confidence 9999999999999999999999996 9999999999999999999999996 7999999999999999999999999999
Q ss_pred ccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHH
Q 013679 331 VKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMA 410 (438)
Q Consensus 331 ~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA 410 (438)
++||+.|+++|+||||||||+||||++|||++||||||||+|+|||+|||||+||+|++|+|++++++++.+++++.+||
T Consensus 326 ~~~p~~~l~~I~nAGsIFlG~~sPe~~GDY~aG~NHVLPT~g~AR~~s~L~v~dF~K~~tv~~~~~~~~~~l~~~~~~LA 405 (425)
T COG0141 326 TENPRELLGKIRNAGSIFLGHYSPESLGDYAAGPNHVLPTSGTARFSSGLSVYDFLKRSTVQELSEEGLARLAETVITLA 405 (425)
T ss_pred hcCHHHHHHHhcccceeeecCCCCccccccccCCCccCCCCccchhcCCccHHHhhhHHHHHHcCHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCHHHHHHHHHHHHhh
Q 013679 411 EIEGLEAHKRAVTFRLQDI 429 (438)
Q Consensus 411 ~~EGL~aHa~sv~~R~~~~ 429 (438)
++|||++|++|+++|++..
T Consensus 406 ~~EgL~aHa~av~~R~~~~ 424 (425)
T COG0141 406 EAEGLTAHAEAVRIRLERL 424 (425)
T ss_pred HhcCcHHHHHHHHHHHhcc
Confidence 9999999999999998753
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-164 Score=1247.59 Aligned_cols=402 Identities=31% Similarity=0.538 Sum_probs=390.0
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHh
Q 013679 18 KARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLA 95 (438)
Q Consensus 18 l~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~~~ai~~A~~nI~~fh~~ 95 (438)
+.+....+.++.+.|++||++||++||+||++||+||||+++++|+||++||++| .+|+++++||++|++||++||++
T Consensus 11 ~~~~~~~~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~ 90 (416)
T PRK13770 11 FSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQES 90 (416)
T ss_pred hccccccchhHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCcccceeCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4454566788999999999999999999999999999999998999999999988 99999999999999999999999
Q ss_pred ccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcC
Q 013679 96 QKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAG 175 (438)
Q Consensus 96 q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~G 175 (438)
|++++|.. .+|+++||||+||+|||||||||++|||||+||++||||||||++|||||||. +|.+||.+|+||++||
T Consensus 91 q~~~~~~~--~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~-~~~i~p~iL~Aa~~~G 167 (416)
T PRK13770 91 IKQTNQQL--EESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQ-PNGVSQEVLAACYITQ 167 (416)
T ss_pred hCCCCeEe--cCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcC-CCCCCHHHHHHHHHcC
Confidence 99999987 68999999999999999999999999999999999999999999999999995 4459999999999999
Q ss_pred CchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 176 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 176 v~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
|+|||++|||||||||||||||||||||||||||+||++|||+|++ +|||||+||||||+||||++|||+|||+|||
T Consensus 168 v~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~iAaDLL 244 (416)
T PRK13770 168 VNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG---QVGIDQIAGPTEIALIIDETADLDAIVYDVF 244 (416)
T ss_pred CCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC---CcCcCCCCCCceeEEEecCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998765 4999999999999999999999999999999
Q ss_pred hccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEEeCCHHHHHHHhhhhccccceecccCh
Q 013679 256 SQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYAPEHLIVNVKDA 334 (438)
Q Consensus 256 aQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~v~~l~ea~~~~N~~APEHLel~~~~p 334 (438)
|||||||+|++||||+|++++ ++|.++|++||++|||++|+++||+ +|.+++|+|+|||++++|+||||||||+++||
T Consensus 245 aQAEHd~~a~~iLvT~s~~la-~~V~~ev~~ql~~lpr~~i~~~al~~~g~ii~v~~~eeai~~~N~~APEHLel~~~~~ 323 (416)
T PRK13770 245 AQAEHDELARTYVISEDAQVL-KDLESRIAKALPNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQTVNP 323 (416)
T ss_pred HHhccCCCCcEEEEeCCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHhheehhCCH
Confidence 999999999999999999996 9999999999999999999999998 59999999999999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHHHhhC
Q 013679 335 EKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEG 414 (438)
Q Consensus 335 ~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~EG 414 (438)
++|+++|||||+||||+|||+++|||++||||||||+|+|||+|||||+||||++|+|+||+++++++++.+.+||++||
T Consensus 324 ~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~l~~l~~~~~~lA~~EG 403 (416)
T PRK13770 324 QPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEA 403 (416)
T ss_pred HHHHhhCCEeceeccCCCCchhhhccccCCCCcCCCCcceeccCCCcHHHeecceeeEEECHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH
Q 013679 415 LEAHKRAVTFRL 426 (438)
Q Consensus 415 L~aHa~sv~~R~ 426 (438)
|++|++|+++|+
T Consensus 404 L~aHa~sv~~R~ 415 (416)
T PRK13770 404 LYNHQQSILIRQ 415 (416)
T ss_pred CHHHHHHHHHhc
Confidence 999999999996
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-163 Score=1249.51 Aligned_cols=405 Identities=36% Similarity=0.551 Sum_probs=391.3
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhc
Q 013679 19 ARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQ 96 (438)
Q Consensus 19 ~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~~~ai~~A~~nI~~fh~~q 96 (438)
.|...+ .++++.|++||++||++||+||++|++|||++++++|+||++||++| .+|+++++||++|++||++||++|
T Consensus 14 ~~~~~d-~~~~~~V~~Il~~Vr~~GD~Al~~yt~~fD~~~~~~l~Vs~~ei~~A~~~v~~~~~~ai~~A~~nI~~fh~~q 92 (426)
T PRK12447 14 KRAETD-SKVRETVEAILADIEARGDAAVREYSRKFDKWSPGSFRLSAAEIDAAVAKVPEQVKEDIRFAQDQVRRFAEAQ 92 (426)
T ss_pred ccccch-hhHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 444334 77999999999999999999999999999999988999999999988 999999999999999999999999
Q ss_pred cCCC--ceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHc
Q 013679 97 KSAE--TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKA 174 (438)
Q Consensus 97 ~~~~--~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~ 174 (438)
++++ |..+..+|+++||||+||+|||||||||++||||||||++||||||||++|||||||+++| +||.+|+||++|
T Consensus 93 ~~~~~~~~~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~ 171 (426)
T PRK12447 93 RDSLQDLEVETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGE-PPPAIVAAMHLA 171 (426)
T ss_pred cCCCCceEEecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHc
Confidence 9965 9987789999999999999999999999999999999999999999999999999995444 999999999999
Q ss_pred CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 175 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 175 Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
||+|||++|||||||||||||||||||||||||||+||++|||+|++ .|+|||+||||||+||||++|||+|||+||
T Consensus 172 Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~vAaDL 248 (426)
T PRK12447 172 GADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG---RVGIDLFAGPTETLVIADDTADPELVATDL 248 (426)
T ss_pred CCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC---ccCcCCCCCCceeEEEeCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999998765 499999999999999999999999999999
Q ss_pred hhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcC-CeEEEeCCHHHHHHHhhhhccccceecccC
Q 013679 255 LSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGH-SFMVFARDMLEGISFSNLYAPEHLIVNVKD 333 (438)
Q Consensus 255 LaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~-g~ii~v~~l~ea~~~~N~~APEHLel~~~~ 333 (438)
||||||||++++||||+|++++ ++|.++|++||+.|||++++++||++ |.+|+|+|++||++++|+||||||||+++|
T Consensus 249 LaQAEHd~~a~~iLvT~s~~la-~~V~~~v~~ql~~l~r~~i~~~sl~~~g~ii~v~~l~ea~~~~N~~APEHLel~~~~ 327 (426)
T PRK12447 249 LGQAEHGPNSPAVLITTSRKLA-EEVLAEIERLLAILPTADVASAAWRDYGEVILCDDLEEMVAEADRYASEHVQVMTED 327 (426)
T ss_pred HHHhccCCCCceEEEECCHHHH-HHHHHHHHHHHHhCCHHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHheeehhCC
Confidence 9999999999999999999996 99999999999999999999999985 999999999999999999999999999999
Q ss_pred hHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHHHhh
Q 013679 334 AEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIE 413 (438)
Q Consensus 334 p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~E 413 (438)
|+.|+++|+|||+||||+|||+++|||++||||||||+|+|||+|||||+||||++|+|+||+++++++++++.+||++|
T Consensus 328 ~~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~Ar~~sgLsv~~FlK~~s~~~~s~~~l~~l~~~~~~lA~~E 407 (426)
T PRK12447 328 PDWFLENMTNYGALFLGERTNVAYGDKVIGTNHVLPTSGAARYTGGLWVGKFLKTVTYQRVTDEASAEIGEYCSRLCRLE 407 (426)
T ss_pred HHHHHhhcCccceeccCCCCchhhhhcccCCCcccCCCcceeecCCCcHHHhccceeEEEECHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhh
Q 013679 414 GLEAHKRAVTFRLQDI 429 (438)
Q Consensus 414 GL~aHa~sv~~R~~~~ 429 (438)
||++|++|+++|+++.
T Consensus 408 GL~aHa~av~~R~~~~ 423 (426)
T PRK12447 408 GFEGHARQADIRVRRY 423 (426)
T ss_pred CChHHHHHHHHHHHHh
Confidence 9999999999999753
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-163 Score=1240.98 Aligned_cols=390 Identities=52% Similarity=0.795 Sum_probs=383.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEecCce
Q 013679 32 VHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGV 109 (438)
Q Consensus 32 V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv 109 (438)
|++||++||++||+||++||+|||++++++|+||++||++| .+|+++++||+.|++||++||++|+|++|..+..+|+
T Consensus 1 V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~l~vs~~ei~~A~~~~~~~~~~ai~~A~~~I~~fh~~q~~~~~~~~~~~Gv 80 (393)
T TIGR00069 1 VKDIIEDVRARGDEALLEYTEKFDGVTLDSLRVSEEEIEAAYAAVDPELKEALELAAENIRAFHEAQLPRSWEVETEPGV 80 (393)
T ss_pred CHHHHHHHHHhHHHHHHHHHHHhcCCCccccccCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEEecCCCe
Confidence 68999999999999999999999999989999999999988 9999999999999999999999999999999889999
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHH
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAIS 189 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIA 189 (438)
++||||+||+|||||||||+++||||+||++||||||||++|||||||++||++||.+|+||++|||||||++|||||||
T Consensus 81 ~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~eIy~vGGAQAIA 160 (393)
T TIGR00069 81 ILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAAKLAGVDEVYKVGGAQAIA 160 (393)
T ss_pred EEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHHHHcCCCeehhcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcCCCCceEEE
Q 013679 190 AMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLV 269 (438)
Q Consensus 190 AlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd~~a~~vLv 269 (438)
||||||||||||||||||||+||++|||+|++ .|||||+|||||++||||++|||+|||+||||||||||+|++|||
T Consensus 161 AlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLv 237 (393)
T TIGR00069 161 ALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG---DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDAQAILV 237 (393)
T ss_pred HHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC---ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEE
Confidence 99999999999999999999999999998865 499999999999999999999999999999999999999999999
Q ss_pred ecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEEeCCHHHHHHHhhhhccccceecccChHHHHhhcccccccc
Q 013679 270 IVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVF 348 (438)
Q Consensus 270 t~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~v~~l~ea~~~~N~~APEHLel~~~~p~~~l~~i~nAGaiF 348 (438)
|+|++|+ ++|+++|++||++|||++|+++||+ +|.+++|+|++||++++|+||||||||+++|||.++++|+|||+||
T Consensus 238 T~s~~la-~~V~~~v~~ql~~l~r~~i~~~al~~~g~ii~v~~l~ea~~~~N~~APEHLel~~~~p~~~l~~I~nAGaiF 316 (393)
T TIGR00069 238 TTSEELA-EAVQEEIERQLATLPRREIARKSLEDNGAIILVDDLEEAIEISNDYAPEHLELQTKNPEELLPKIRNAGSIF 316 (393)
T ss_pred ECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHhCCEEEEECCHHHHHHHHHhhChHhheehhCCHHHHHhhcCccceec
Confidence 9999996 9999999999999999999999998 5999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHHHhhCCHHHHHHHHHH
Q 013679 349 LGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAVTFR 425 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~EGL~aHa~sv~~R 425 (438)
||+|||+++|||++||||||||+|+|||+|||||+||||++|+|++|+++++++++++.+||++|||++|++|+++|
T Consensus 317 lG~~tp~a~GDY~aG~NHvLPT~G~Ar~~sgL~v~~F~K~~s~~~~s~~~l~~l~~~~~~lA~~EGL~aHa~sv~~R 393 (393)
T TIGR00069 317 LGPYTPEAAGDYAAGPNHVLPTGGTARFYSGLSVLDFLKRITVQRLSKEGLAELAPAVETLAEAEGLEAHANSVRIR 393 (393)
T ss_pred cCCCCchhhhhccCCCCcccCCCcceeecCCccHHHhccceeEEEECHHHHHHHHHHHHHHHHhCCChHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-159 Score=1213.33 Aligned_cols=386 Identities=53% Similarity=0.809 Sum_probs=380.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCceEEec
Q 013679 29 FSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENM 106 (438)
Q Consensus 29 ~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~ 106 (438)
++.|++||++||++||+||++||+|||++++++|+||++||++| .+|+++++||+.|++||++||++|+|++|.++..
T Consensus 2 ~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~vs~~ei~~A~~~~~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~ 81 (390)
T cd06572 2 EETVREIIEDVRERGDEALLEYTEKFDGVELESLRVSEEEIDAAYAAVDPELKEAIELAAENIRAFHEAQLPKDWEVETE 81 (390)
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHhcCCCccccccCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 57899999999999999999999999999999999999999988 8999999999999999999999999999999888
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHH
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQ 186 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQ 186 (438)
+|+++||||+||+|||||||||+++||||+||++||||||||++|||||||++||++||.+|+||++||++|||++||||
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~eiy~vGGaQ 161 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDEIYKVGGAQ 161 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcEEeccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcCCCCce
Q 013679 187 AISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDSQV 266 (438)
Q Consensus 187 AIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd~~a~~ 266 (438)
|||||||||||||||||||||||+||++|||+|++ .|+|||+|||||++||||++|||+|||+||||||||||+|++
T Consensus 162 AIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~a~a 238 (390)
T cd06572 162 AIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSG---DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPDSQA 238 (390)
T ss_pred HHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcC---CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCCCeE
Confidence 99999999999999999999999999999998866 499999999999999999999999999999999999999999
Q ss_pred EEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEEeCCHHHHHHHhhhhccccceecccChHHHHhhccccc
Q 013679 267 VLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAG 345 (438)
Q Consensus 267 vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~v~~l~ea~~~~N~~APEHLel~~~~p~~~l~~i~nAG 345 (438)
||||+|++|+ ++|+++|++||+.|||++++++||. +|.+++|+|++||++++|+||||||||+++||++|+++|+|||
T Consensus 239 iLvT~s~~la-~~V~~~v~~ql~~l~r~~~~~~~~~~~g~ii~~~~~~eai~~~N~~APEHLel~~~~~~~~l~~i~nAG 317 (390)
T cd06572 239 ILVTTSEELA-EAVEEEVERQLAELPRREIAAKSLLDYGAIILVDDLEEAIELANEYAPEHLELQTEDPEELLEKIRNAG 317 (390)
T ss_pred EEEECCHHHH-HHHHHHHHHHHHhCCcHHHHHHHHHhCCEEEEECCHHHHHHHHHhhchhhheeHhcCHHHHHhhCccce
Confidence 9999999996 9999999999999999999999998 6999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHHHhhCCHHH
Q 013679 346 SVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAH 418 (438)
Q Consensus 346 aiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~EGL~aH 418 (438)
+||||+|||+++|||++||||||||+|+|||+|||||+||||++|+|++|+++++++++++.+||++|||++|
T Consensus 318 siFlG~~tp~a~GDY~aGpNHvLPT~G~Ar~~sgL~v~~F~K~~s~~~~s~~~l~~l~~~~~~lA~~EGl~aH 390 (390)
T cd06572 318 SIFLGPYTPEALGDYAAGPNHVLPTGGTARFYSGLSVDDFLKRITVQEYSKEGLRALAPAVATLAEAEGLEAH 390 (390)
T ss_pred EEeecCCCchhhhccccCCCCccCCCcceeecCCCCHHHheecceeEEECHHHHHHHHHHHHHHHHhcCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-141 Score=1067.28 Aligned_cols=363 Identities=32% Similarity=0.427 Sum_probs=343.9
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
+.++++.|++||++||++||+||++|++|||++++++|+||++ .++|++++++|+.|++||+.||++|++++|..+
T Consensus 6 ~~~~~~~V~~Ii~~Vr~~GD~Al~~yt~~FD~~~~~~~~V~~~----~~~~~~~~~ai~~a~~~I~~fh~~q~~~~~~~~ 81 (368)
T PRK13769 6 PRDVVKSVEKIVDDVAERGLQAALEYSERLDGVAPEAALVEPR----PGGDPAVVAAALEAAKSLEALYSRLKPPEAVDF 81 (368)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccceeECch----hhCCHHHHHHHHHHHHHHHHHHHHhCCCCeEec
Confidence 4568999999999999999999999999999999888999973 278999999999999999999999999999876
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcch
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGG 184 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGG 184 (438)
.+|+++||||+||+||||||| +|||||+||++||||||||++||+||||+ + +||.+|+||++|||||||++||
T Consensus 82 -~~Gv~~g~~~~Pi~rvG~YVP---a~~pStvLM~~iPAkvAGV~~Iv~~TPp~--~-i~p~vL~aa~~~Gv~eIy~vGG 154 (368)
T PRK13769 82 -YGGVLRSVFWKPVRRAALYVP---ARYVSTLVMLAVPARAAGVEEIYVVTPPR--G-VTGELLAVAKELGVKGVLAIGG 154 (368)
T ss_pred -CCCeEEEEEEeeeeeeEEEec---cchHHHHHHhhccHhhcCCCeEEEeCCCC--C-CCHHHHHHHHHcCCCeeecccC
Confidence 699999999999999999999 59999999999999999999999999993 3 9999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcCCCC
Q 013679 185 AQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGPDS 264 (438)
Q Consensus 185 AQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd~~a 264 (438)
||||||||||| ||||||||||+||++|||+|++ +|||||+|||||++||||+ |||+|||+||||||||||+|
T Consensus 155 AQAIAa~a~gt----~VDkIvGPGN~yV~~AK~~v~g---~V~ID~~AGPSEvlViAD~-a~p~~vAaDLLaQAEH~~~a 226 (368)
T PRK13769 155 PHGLAYAVFHM----GVDMVAGPGGLYVQAAKYVLSQ---YVGIDGIEGPTELVVYAEG-VPPEVAVRGALAQLEHGPTS 226 (368)
T ss_pred HHHHHHHhcCC----CcCEEECCCcHHHHHHHHHHhC---CcCCCCcCCCcceEEEcCC-CCHHHHHHHHHHHhhcCCCC
Confidence 99999999998 9999999999999999997755 3999999999999999998 99999999999999999999
Q ss_pred ceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHHHHHhhhhccccceecccChHHHHhhcccc
Q 013679 265 QVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENA 344 (438)
Q Consensus 265 ~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea~~~~N~~APEHLel~~~~p~~~l~~i~nA 344 (438)
++||||+|++++ ++|.++|++|+ ++ +...|.+++|+|+|||++++|+||||||||++ |+.++++||||
T Consensus 227 ~~iLvT~s~~la-~~V~~~v~~~~--------~~-~~~~~~iivv~~leeai~~~N~~APEHLel~~--~~~~~~~i~nA 294 (368)
T PRK13769 227 FAYLLSTDAELL-KAAEEIYRRER--------TS-SMGPLEVRKVAGVEEAVRFIDEIAPEHLEVWG--RREVAYRVRNV 294 (368)
T ss_pred cEEEEECCHHHH-HHHHHHHHHHH--------Hh-cCCCCeEEEECCHHHHHHHHHhhChHheEeeC--cHHHHhhCCcc
Confidence 999999999996 99999999984 22 21135699999999999999999999999998 78899999999
Q ss_pred cccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHHHHhhhHHHHHHHHhhCCHHHHHHH
Q 013679 345 GSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKRAV 422 (438)
Q Consensus 345 GaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~~~~~~~~~~~lA~~EGL~aHa~sv 422 (438)
|+||| |||+++|||++||||||||+|+|||+|||||+||||++|+|+++ +++++++++.+||++|||++|++|+
T Consensus 295 GsiFl--~~p~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~t~~~~~--~~~~l~~~~~~lA~~EGL~aHa~s~ 368 (368)
T PRK13769 295 GAVSV--NMPSPYLDYVAGISHVLPTGGTARWRGIITPLTFMKPIGVAEAV--GELELAEAARRLAEYEGFQYHREAL 368 (368)
T ss_pred CChhc--CCchhhhccccCCCCcCCCCcceeccCCCcHHHcccceeEEEeh--hHHHHHHHHHHHHHhCCChhHHhcC
Confidence 99999 89999999999999999999999999999999999999999997 8999999999999999999999984
|
|
| >KOG2697 consensus Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-133 Score=981.31 Aligned_cols=428 Identities=76% Similarity=1.164 Sum_probs=402.5
Q ss_pred EEEcCCCCHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCC--CCCCCCCCCHHHHH
Q 013679 3 SYRLSELTHAEVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENV--SELPDPELDAAVKE 80 (438)
Q Consensus 3 ~~~~~~~~~~~~~~~l~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~--~e~~~a~l~~~~~~ 80 (438)
.++...++..+..++++|+..+..++..+|.+||++||.+||.||++||+|||++++.+..+.. .|.--..+++++++
T Consensus 10 syr~~~l~~~~v~~ll~RPiq~ts~I~~~VnPIIe~Vrs~G~~al~eYtekFdkVqL~~~Vl~apf~e~~~~~l~~~~KE 89 (446)
T KOG2697|consen 10 SYRLSELSSSQVDSLLSRPIQDTSSIFATVNPIIEAVRSNGDNALKEYTEKFDKVQLNKVVLDAPFSELSVPELDSNVKE 89 (446)
T ss_pred HHHHhhhhHHHHHHHHhccchhhHHHHHHhhHHHHHHHhcchhHHHHHHHhhcceecccHhhcCCCchhhhhhccHHHHH
Confidence 3445556666778899999999999999999999999999999999999999999987644332 22111269999999
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQD 160 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~ 160 (438)
++..|++||++||.+|++....+++.+||.|.+.-|||+|||||||||+|.+|||.||.+|||||||||+||+.|||++|
T Consensus 90 a~Dva~~Ni~aFH~aQl~~t~~Vetm~GV~C~R~sRpI~~VGLYiPGGTAvLPSTALMLgvPAqvAgCk~vV~atPprKD 169 (446)
T KOG2697|consen 90 AFDVAYDNIYAFHLAQLSTTKSVETMKGVRCKRVSRPIGSVGLYIPGGTAVLPSTALMLGVPAQVAGCKTVVLATPPRKD 169 (446)
T ss_pred HHHHHHHHHHHHHHhcCCcceeeeccCceeeeecCccccceeEEccCCceeccchHhhhcCcHhhcCCceEEEecCCCcC
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC-CCCcccccCCCCCceEEE
Q 013679 161 GSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN-SEAMISIDMPAGPSEVLV 239 (438)
Q Consensus 161 G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~-~~~~VgID~~AGPSEvlI 239 (438)
|++.|+++|.|+.+|++.|...|||||||||||||+++||||||+||||.|||+||..|.. ...-|.|||+||||||||
T Consensus 170 G~v~pEvvY~A~k~Ga~~I~lAGGAQAiAAMAyGt~~~PKV~KIfGPGNQfVTAAKM~vQNd~~AlvsIDmPAGPSEVLV 249 (446)
T KOG2697|consen 170 GSVCPEVVYCAKKAGATHILLAGGAQAIAAMAYGTDSCPKVEKIFGPGNQFVTAAKMIVQNDYEALVSIDMPAGPSEVLV 249 (446)
T ss_pred CccCcceeeehhhcChhheeccccHHHHHHHHhccccCcchhhhcCCchhhhhhhhhheeccccceEEeccCCCCceEEE
Confidence 9999999999999999999999999999999999999999999999999999999997733 245699999999999999
Q ss_pred EecCCCCHHHHHHhhhhccCcCCCCceEEEec--CchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHHHH
Q 013679 240 IADIYASPVHIAADLLSQAEHGPDSQVVLVIV--GDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGIS 317 (438)
Q Consensus 240 iAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~--s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea~~ 317 (438)
|||+++||++||+||||||||++||+.|||+- |.+.. ++++++|.+|...|||.+|+++++.++.++.|++++||++
T Consensus 250 IADE~a~p~~vA~DLLSQAEHG~DSQviLv~V~lS~~~~-~~Iq~ai~~qal~LpR~~i~~kai~hS~iV~~d~~~eA~e 328 (446)
T KOG2697|consen 250 IADEHASPVYVAADLLSQAEHGPDSQVILVVVGLSVDML-NAIQEAIAKQALSLPRGEIASKAISHSFIVFADDMIEAIE 328 (446)
T ss_pred EecCCCChHHHHHHHHhHhhcCCCceEEEEEecCCHHHH-HHHHHHHHHHHhcCcHHHHHHHHhhhceEEEecCHHHHHh
Confidence 99999999999999999999999999999864 56664 9999999999999999999999999999999999999999
Q ss_pred HhhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHH
Q 013679 318 FSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEE 397 (438)
Q Consensus 318 ~~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~ 397 (438)
++|.||||||.|+++|.++|...|.||||||+|+||||++|||.+|+||+|||.|+||.+||.|.++|+|.+|.|.+|+|
T Consensus 329 ~SNlYaPEHLil~vknA~~y~~lidNAGSVFvGpwtPeS~GDYaSGTNHtLPTYGYAr~YSGvstdsFlKfiT~Q~lTeE 408 (446)
T KOG2697|consen 329 FSNLYAPEHLILNVKNAEKYEGLIDNAGSVFVGPWTPESVGDYASGTNHTLPTYGYARMYSGVSTDSFLKFITVQSLTEE 408 (446)
T ss_pred hhhccCchhheeeccchhhhhhhhccCCceeecCCCcccccccccCCCccCcccchhhhccCccHHHHHHHHHHhhcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHhhCCHHHHHHHHHHHHhhhh
Q 013679 398 GLKKLGPYVATMAEIEGLEAHKRAVTFRLQDIEA 431 (438)
Q Consensus 398 ~~~~~~~~~~~lA~~EGL~aHa~sv~~R~~~~~~ 431 (438)
|++++++.++++|+.|||++|++++++|+.++..
T Consensus 409 Gl~nlGp~V~~~Ae~EGLdaH~~AV~~R~~~l~~ 442 (446)
T KOG2697|consen 409 GLRNLGPYVATMAEIEGLDAHKRAVTLRLKDLEA 442 (446)
T ss_pred HHhhhchHhhhHHhhccchhhhhheEEeeccccc
Confidence 9999999999999999999999999999987654
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0018 Score=65.64 Aligned_cols=267 Identities=18% Similarity=0.151 Sum_probs=154.5
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCc-hhhh--
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HILK-- 181 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~-eIy~-- 181 (438)
..|.....++.|+.-|+++.|+ -+|-. .+...+||-.+|..-|+-.+|- .......+......+|.. .++.
T Consensus 81 ~~~~~~~~~~~p~Gvv~~i~p~---n~p~~~~~~~~~~aL~~GN~vilk~s~~--~~~~~~~l~~~l~~ag~p~~~v~~~ 155 (367)
T cd06534 81 DPGGEAYVRREPLGVVGVITPW---NFPLLLAAWKLAPALAAGNTVVLKPSEL--TPLTALALAELLQEAGLPPGVVNVV 155 (367)
T ss_pred CCCceeEEEEEeeeEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEECCCc--chHHHHHHHHHHHhcCCCcCeEEEE
Confidence 3456677889999999999995 35544 7778889999998877664332 222233344455566632 2211
Q ss_pred cchHH-HHHHHhhcCCCCCCceEEecCCc-HHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh----
Q 013679 182 AGGAQ-AISAMAWGTESCPKVEKIFGPGN-QYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL---- 255 (438)
Q Consensus 182 vGGAQ-AIAAlAyGTetIp~VDkIvGPGN-~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL---- 255 (438)
-|+.+ ...+|.. -|.||.|.=-|+ ..+..-.+..... +.--+--..|.| .+|-|+++|.+.+|..++
T Consensus 156 ~~~~~~~~~~l~~----~~~vd~v~~tGs~~~~~~v~~~~~~~-~~~~~~e~~g~~--~~iV~~~ad~~~aa~~i~~~~~ 228 (367)
T cd06534 156 PGGGDEVGAALLS----HPRVDKISFTGSTAVGKAIMKAAAEN-LKPVTLELGGKS--PVIVDEDADLDAAVEGAVFGAF 228 (367)
T ss_pred EcCchhHHHHHhc----CCCcCEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCC--eEEECCCCCHHHHHHHHHHHHH
Confidence 23332 3333432 367898776666 3333333322210 001122234555 455566799888776665
Q ss_pred hccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCH-HHHHHhhcCC---eEEEeCCHHHHHHHhhhhcccc-ceec
Q 013679 256 SQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRG-EFASKALGHS---FMVFARDMLEGISFSNLYAPEH-LIVN 330 (438)
Q Consensus 256 aQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~-~ia~~sl~~g---~ii~v~~l~ea~~~~N~~APEH-Lel~ 330 (438)
..+=+...+...++.... .. +++.+.+.-.+...+.. .+..+-+ .| .++.++|++|+++++|..--=| ..|.
T Consensus 229 ~~~gq~C~s~~~v~v~~~-~~-~~f~~~l~tl~~~~~~~~~~~~~E~-fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~ 305 (367)
T cd06534 229 FNAGQICTAASRLLVHES-IY-DEFVEKLVTVLVDVDPDMPIAQEEI-FGPVLPVIRFKDEEEAIALANDTEYGLTAGVF 305 (367)
T ss_pred hcCCCCCCCCcEEEEcHH-HH-HHHHHhhceeeeCCCCCCccccCCc-cCceEEEEecCCHHHHHHHHhCCCCCCeEEEE
Confidence 333334455555555433 53 66666666333333321 2221111 13 5667899999999999864433 6677
Q ss_pred ccChH---HHHhhcccccccccCCCCccc-ccccccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 331 VKDAE---KWESIIENAGSVFLGEWTPES-VGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 331 ~~~p~---~~l~~i~nAGaiFlG~~sp~a-~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++|+. .+..++ ++|.+|++..+... -+-.+.|. ..+|..|+.|.-++..|++..+++
T Consensus 306 t~d~~~~~~~~~~~-~~g~v~iN~~~~~~~~~~pfgg~----~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 306 TRDLNRALRVAERL-RAGTVYINDSSIGVGPEAPFGGV----KNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCHHHHHHHHHhC-CcceEEECCCCCCCCCCCCCCCc----ccCccCCCChHHHHHHhceEEEEe
Confidence 88874 355555 79999999765542 11122332 467777877777888888876654
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0073 Score=62.44 Aligned_cols=335 Identities=19% Similarity=0.176 Sum_probs=171.5
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
.+..+..+.++++.+.++++-++-....++...+ . +.....|+. ...+.++..++..+.+...+.
T Consensus 17 ~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~-~---~~~~~~ei~------~~i~~l~~~~~~~~~~~~~~~----- 81 (432)
T cd07078 17 LPPAERAAILRKLADLLEERREELAALETLETGK-P---IEEALGEVA------RAADTFRYYAGLARRLHGEVI----- 81 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-C---HHHHHHHHH------HHHHHHHHHHHHHHHhcCccc-----
Confidence 3445556667777777777766655554444332 1 110001111 122223333333333222111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCc-hhh
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVT-HIL 180 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~-eIy 180 (438)
.....|-....++.|+.-|+++.|+ -+| +.++...+||-.+|..-|+- |+...-...-.++...+.+|.. .++
T Consensus 82 ~~~~~~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~AL~aGN~vilk--ps~~~~~~~~~l~~~l~~ag~p~~~~ 156 (432)
T cd07078 82 PSPDPGELAIVRREPLGVVGAITPW---NFPLLLAAWKLAPALAAGNTVVLK--PSELTPLTALLLAELLAEAGLPPGVL 156 (432)
T ss_pred cccCCCceEEEEEeecceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCCCChHHHHHHHHHHHHcCCCcCcE
Confidence 1112344556778999999999884 366 77888899999999765544 3322212223344555666732 333
Q ss_pred hc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHH-HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh
Q 013679 181 KA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA-AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 256 (438)
Q Consensus 181 ~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~-AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa 256 (438)
.+ | +.+.-.+|. .-+.+|.|.=-|+.-+.. -++........+-..+ -|.+ -+|-|+++|.+.+|-.++.
T Consensus 157 ~~~~~~~~~~~~~l~----~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~-gg~~--~~iV~~~ad~~~aa~~i~~ 229 (432)
T cd07078 157 NVVTGDGDEVGAALA----SHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLEL-GGKS--PLIVFDDADLDAAVKGAVF 229 (432)
T ss_pred EEEecCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEec-CCCC--eeEECCCCCHHHHHHHHHH
Confidence 32 2 222223333 246788888444443321 1111110000122222 2443 3445566888877766553
Q ss_pred cc----CcCCCCc-eEEEecCchhhHHHHHHHHHHHHhcCC---------------CH-------HHHHHhhcC------
Q 013679 257 QA----EHGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP---------------RG-------EFASKALGH------ 303 (438)
Q Consensus 257 QA----EHd~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r~-------~ia~~sl~~------ 303 (438)
-+ =+.-.+. .++|..+ .. +++.+.+.++++.+. +. +.+.++.++
T Consensus 230 ~~~~~~Gq~C~a~~~i~v~~~--~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~ 306 (432)
T cd07078 230 GAFGNAGQVCTAASRLLVHES--IY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLC 306 (432)
T ss_pred HHHhccCCCccCCceEEEcHH--HH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 22 2222333 3444333 32 555555555544322 00 111111000
Q ss_pred ---------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhccc
Q 013679 304 ---------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIEN 343 (438)
Q Consensus 304 ---------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~n 343 (438)
| .++-++|+|||++++|..--=| ..|.++|+.. ++.++ +
T Consensus 307 gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~-~ 385 (432)
T cd07078 307 GGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERL-E 385 (432)
T ss_pred CCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhc-C
Confidence 1 3445788999999999853222 6777888753 44454 6
Q ss_pred ccccccCCCCcc-cccccccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 344 AGSVFLGEWTPE-SVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 344 AGaiFlG~~sp~-a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+|.||++..+.. .-+--+.|.- .+|..++.|..++..|++..++.
T Consensus 386 ~g~v~iN~~~~~~~~~~pfgG~~----~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 386 AGTVWINDYSVGAEPSAPFGGVK----QSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred cceEEECCCCCCCCCCCCcCCcC----cCcCCccchHHHHHHhhceEEEE
Confidence 899999987665 1111233433 37778888999999999887764
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.13 Score=53.96 Aligned_cols=331 Identities=16% Similarity=0.153 Sum_probs=170.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 103 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~ 103 (438)
...+-.+.++++.+.++++.++-..-.++..-+ . +.....| ++ ...+-++.++++++++.....+.+..
T Consensus 41 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~---~~~a~~e-----v~-~~~~~l~~~a~~~~~~~~~~~~~~~~- 109 (453)
T cd07094 41 PPHERMAILERAADLLKKRAEEFAKIIACEGGK-P---IKDARVE-----VD-RAIDTLRLAAEEAERIRGEEIPLDAT- 109 (453)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC-C---HHHHHHH-----HH-HHHHHHHHHHHHHHHhcCcccccccc-
Confidence 344555666777777777766644444443321 1 1111111 11 34445556666666554222221110
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhh
Q 013679 104 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HIL 180 (438)
Q Consensus 104 ~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy 180 (438)
...++...-.++.|+.-|++..|. -|| +..++..+||-.+|..=|+- |+... ..... +....+.+|.. .++
T Consensus 110 ~~~~~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~AL~aGN~VI~K--ps~~~-p~~~~~l~~~l~~ag~P~g~~ 183 (453)
T cd07094 110 QGSDNRLAWTIREPVGVVLAITPF---NFPLNLVAHKLAPAIATGCPVVLK--PASKT-PLSALELAKILVEAGVPEGVL 183 (453)
T ss_pred ccCCCceEEEEEeccceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCCcc-hHHHHHHHHHHHHcCCCcCcE
Confidence 111244445667899999999995 356 67777889999999765544 44211 11122 22234444542 222
Q ss_pred hc--chHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh-
Q 013679 181 KA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS- 256 (438)
Q Consensus 181 ~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa- 256 (438)
.+ |+...++..-.. -|.+|+|.-=|..=+-.+ ++.... ..+-+.+= |-+= +|-|++||.+.+|-.++.
T Consensus 184 ~~v~g~~~~~~~~l~~---~~~v~~V~fTGs~~~g~~v~~~a~~--~~~~lelG-Gk~~--~iV~~dadl~~aa~~i~~~ 255 (453)
T cd07094 184 QVVTGEREVLGDAFAA---DERVAMLSFTGSAAVGEALRANAGG--KRIALELG-GNAP--VIVDRDADLDAAIEALAKG 255 (453)
T ss_pred EEEeCCCchHHHHHhc---CCCCCEEEEECcHHHHHHHHHHcCC--CceEEecC-CCCc--eEECCCCCHHHHHHHHHHH
Confidence 22 322223322221 267888875454332111 111111 01333322 5442 444556887776665543
Q ss_pred ---ccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC--------
Q 013679 257 ---QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH-------- 303 (438)
Q Consensus 257 ---QAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~-------- 303 (438)
-+=..-.+...++. .++.. +++.+.+.++++.+. . .+.+.++.+.
T Consensus 256 ~~~~~GQ~C~a~~~i~V-~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 333 (453)
T cd07094 256 GFYHAGQVCISVQRIYV-HEELY-DEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGG 333 (453)
T ss_pred HHHhcCCCCcCCeEEEE-eHHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCc
Confidence 22223334344444 33343 666666666665431 0 0111222111
Q ss_pred ---------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhcccccccc
Q 013679 304 ---------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGSVF 348 (438)
Q Consensus 304 ---------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAGaiF 348 (438)
| .++-++|+|||++++|.. +.. ..|.++|+. ++..++ .+|.|+
T Consensus 334 ~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~a~~~~~~l-~~g~v~ 411 (453)
T cd07094 334 ERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANST-DYGLQAGIFTRDLNVAFKAAEKL-EVGGVM 411 (453)
T ss_pred cCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCC-CCCCeeEEECCCHHHHHHHHHhc-CcCeEE
Confidence 1 234488999999999975 333 567788874 455666 489999
Q ss_pred cCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 349 LGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
+..++.. ..--+|- +|..|+.|.-+++.|++.-++
T Consensus 412 iN~~~~~--------~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i 451 (453)
T cd07094 412 VNDSSAF--------RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTV 451 (453)
T ss_pred EcCCCCC--------CCCCCCCCCccccccCcCChHHHHHHHhceeEE
Confidence 9986421 1112454 456788888888888887665
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.32 Score=50.97 Aligned_cols=255 Identities=18% Similarity=0.162 Sum_probs=140.0
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCc-hhhhc--chH
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA--GGA 185 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~-eIy~v--GGA 185 (438)
..-.+..|+.-|+++.|. .+|+ ...++..+||-.+|..=|+-.+|- ..... .+....+.+|.. .++.+ |+.
T Consensus 116 ~~~~~~~P~GVv~~i~p~-N~P~-~~~~~~~~~ALaaGN~VI~Kps~~---~p~~~~~l~~~l~~ag~P~gvv~~v~g~~ 190 (453)
T cd07149 116 IGFTIREPIGVVAAITPF-NFPL-NLVAHKVGPAIAAGNAVVLKPASQ---TPLSALKLAELLLEAGLPKGALNVVTGSG 190 (453)
T ss_pred eEEEEeecceEEEEECCC-CChH-HHHHHHHHHHHHcCCEEEEECCCc---chHHHHHHHHHHHHcCcCccceEEeecCc
Confidence 334567899999999995 3443 356678899999998755443332 11122 223344555543 33332 332
Q ss_pred HHH-HHHhhcCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCc--
Q 013679 186 QAI-SAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH-- 260 (438)
Q Consensus 186 QAI-AAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH-- 260 (438)
..+ .+|. .-|++|+|+=-|..-+-.+ |+ .+. ..+-..+ -|-+ -+|-|+++|.+.+|-.++.-+=.
T Consensus 191 ~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~-a~~--~~~~lel-GGk~--p~iV~~dadl~~aa~~i~~~~~~~~ 260 (453)
T cd07149 191 ETVGDALV----TDPRVRMISFTGSPAVGEAIARK-AGL--KKVTLEL-GSNA--AVIVDADADLEKAVERCVSGAFANA 260 (453)
T ss_pred hHHHHHHh----cCCCCCEEEEECCHHHHHHHHHH-cCC--Cceeeec-CCCc--eEEECCCCCHHHHHHHHHHHHHHhc
Confidence 222 2232 2478999876666655332 22 111 0132222 2433 34555679999988877642221
Q ss_pred --CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----CH------------------HHHHHh----------------
Q 013679 261 --GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----RG------------------EFASKA---------------- 300 (438)
Q Consensus 261 --d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r~------------------~ia~~s---------------- 300 (438)
.-.+...++.. ++.. +++.+.+.+.++.+. +. +...++
T Consensus 261 GQ~C~a~~~v~V~-~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~ 338 (453)
T cd07149 261 GQVCISVQRIFVH-EDIY-DEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA 338 (453)
T ss_pred CCCCCCCceEEEc-HhHH-HHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCe
Confidence 12233333333 3343 666666666665552 10 111111
Q ss_pred ----------------hc---CC---eEEEeCCHHHHHHHhhhhccccc--eecccCh---HHHHhhcccccccccCCCC
Q 013679 301 ----------------LG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDA---EKWESIIENAGSVFLGEWT 353 (438)
Q Consensus 301 ----------------l~---~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p---~~~l~~i~nAGaiFlG~~s 353 (438)
+. .| .++-++|+|||++++|. .+-.| .|.++|. .+++.+++ +|.|++...+
T Consensus 339 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gLt~~v~t~d~~~~~~~~~~l~-~g~v~iN~~~ 416 (453)
T cd07149 339 ILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAND-SPYGLQAGVFTNDLQKALKAARELE-VGGVMINDSS 416 (453)
T ss_pred EEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhC-CCcCceEEEEcCCHHHHHHHHHHcC-cCeEEECCCC
Confidence 00 12 23447899999999997 34444 5667776 45777776 8999999764
Q ss_pred cccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 354 PESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 354 p~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
... .-.+|-+ |..|+.|.-+++.|.+..++
T Consensus 417 ~~~--------~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~ 451 (453)
T cd07149 417 TFR--------VDHMPYGGVKESGTGREGPRYAIEEMTEIKLV 451 (453)
T ss_pred CCC--------CCCCCcCCccccccCCCChHHHHHHhhceeEE
Confidence 211 1124554 45677776777788776554
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.69 Score=48.58 Aligned_cols=256 Identities=20% Similarity=0.229 Sum_probs=139.0
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCch-hhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVTH-ILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~e-Iy~v- 182 (438)
+|...-.++.|+.-|++..|- -||-. .+..++||-.+|..=|+ -|.. ........| .....+|+.+ ++.+
T Consensus 109 ~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~Vil--Kps~-~~p~t~~~l~~~~~~ag~P~g~v~~v 182 (451)
T cd07150 109 PGTVSMSVRRPLGVVAGITPF---NYPLILATKKVAFALAAGNTVVL--KPSE-ETPVIGLKIAEIMEEAGLPKGVFNVV 182 (451)
T ss_pred CCceeEEEEecccEEEEECCC---ccHHHHHHHHHHHHHhcCCeEEE--ECCc-cCcHHHHHHHHHHHHhCCCcCcEEEe
Confidence 455566889999999999994 46653 45567899999987443 3432 111122222 3344456542 2222
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |...-.+|. .-|.||+|.==|..-| .+|+++- .+-..+ .|.+= +|-|++||.+..+-.+
T Consensus 183 ~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~-----~~~lel-GG~~~--~iV~~dadl~~aa~~i 250 (451)
T cd07150 183 TGGGAEVGDELV----DDPRVRMVTFTGSTAVGREIAEKAGRHLK-----KITLEL-GGKNP--LIVLADADLDYAVRAA 250 (451)
T ss_pred eCCCcHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCC-----ceEeec-CCCCe--eEECCCCChHHHHHHH
Confidence 2 332222222 2478998855555433 2332211 122222 24443 4455679999877766
Q ss_pred hhc-cCcC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C---------------H---HHHHHh--------
Q 013679 255 LSQ-AEHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R---------------G---EFASKA-------- 300 (438)
Q Consensus 255 LaQ-AEHd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r---------------~---~ia~~s-------- 300 (438)
+.- -.|. -.+...++.. ++.. +++.+.+.++++.+. . . +.+..+
T Consensus 251 ~~~~~~~~GQ~C~a~~rv~V~-~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl 328 (451)
T cd07150 251 AFGAFMHQGQICMSASRIIVE-EPVY-DEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLL 328 (451)
T ss_pred HHHHHhhcCCCCCCCeeEEEc-HHHH-HHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 521 1222 2333344443 3343 666666666655441 0 0 111111
Q ss_pred ------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccc
Q 013679 301 ------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGS 346 (438)
Q Consensus 301 ------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGa 346 (438)
+. .| .|+.++|+|||++++|..-=-| ..|.++|+. ++..+++ +|.
T Consensus 329 ~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~-~G~ 407 (451)
T cd07150 329 TGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLE-SGM 407 (451)
T ss_pred eCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcC-cCE
Confidence 11 12 3455899999999999863222 467788875 3555665 899
Q ss_pred cccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
|++..++.- + ..-+|- +|..|+.|..++..|++..++
T Consensus 408 v~iN~~~~~---~-----~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v 449 (451)
T cd07150 408 VHINDPTIL---D-----EAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449 (451)
T ss_pred EEECCCCCC---C-----CCCCCcCCccccccCcCCcHHHHHHhheeeEE
Confidence 999976531 1 122454 455677777777788776655
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.02 Score=60.39 Aligned_cols=323 Identities=20% Similarity=0.222 Sum_probs=175.4
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~ 101 (438)
....+-.+.++.+.+.++++.|+=..-.++..-+- +. +.+.-+..++++++.|...-.. ...
T Consensus 48 ~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~----~~-------------~a~~ev~~~~~~~~~~~~~~~~~~~~ 110 (462)
T PF00171_consen 48 LPAAERARILERFADLLEERRDELAELIALETGKP----IA-------------EARGEVDRAIDFLRYYADAARKLAGE 110 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSS----HH-------------HHHHHHHHHHHHHHHHHHHHHHHTEE
T ss_pred hhhhhHHHHHHHHHHHHhhcccccccccccccccc----cc-------------cccchhhhhhhhhhhhhhcccceehh
Confidence 44455667777788888887776554444433321 00 2222234444444444322111 111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-h
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 179 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-I 179 (438)
.....+|.....++.|+.-|++..|- .+|+.+ .+...+||-.+|+.=|+- |+. ...... .+..+.+.+|+.. +
T Consensus 111 ~~~~~~~~~~~~~~~P~GVv~~i~p~-n~P~~~-~~~~~~~ALaaGN~VVlk--ps~-~~~~~~~~l~~~~~~AglP~gv 185 (462)
T PF00171_consen 111 VLPSDPGSRNYTRREPLGVVLIITPW-NFPLYL-AVWKIAPALAAGNTVVLK--PSE-QAPLTALLLAELLEEAGLPPGV 185 (462)
T ss_dssp EEEESTTEEEEEEEEE-SEEEEEE-S-SSCTHH-HHHHHHHHHHTT-EEEEE--EBT-TSHHHHHHHHHHHHHHTSTTTS
T ss_pred hcccccccccccccccccceeecccc-cccccc-cccchhhhhcccccceee--ecc-ccccccccchhhcccccccccc
Confidence 12224788899999999999999994 344443 345577899999963333 432 111222 2334555567765 2
Q ss_pred --hhcc-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 180 --LKAG-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 180 --y~vG-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
+.-| |...-.+|. .-|++|+|.==|..= -++++.+ . .|-.. +.|-+ -+|-+++||.+..
T Consensus 186 v~vv~g~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~a~~~~--~---~v~le-lgG~~--p~iV~~daDld~a 253 (462)
T PF00171_consen 186 VNVVPGDGSEVGEALV----SHPDVDLVSFTGSTATGRAIAKAAAKNL--K---PVVLE-LGGKN--PVIVDPDADLDKA 253 (462)
T ss_dssp EEEECSSTHHHHHHHH----HTTTEEEEEEESEHHHHHHHHHHHHTTT--S---EEEEE-ECEEE--EEEE-TTSHHHHH
T ss_pred ccccccccccccceee----eccccceeeecchhhhhhhhhhhccccc--c---ccccc-ccccc--eeeEecccccccc
Confidence 2245 776666665 248899995333322 2222110 0 01111 22444 3455677898887
Q ss_pred HHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC------------------C----HHHHHHhhcCC
Q 013679 251 AADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP------------------R----GEFASKALGHS 304 (438)
Q Consensus 251 AaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~------------------r----~~ia~~sl~~g 304 (438)
|-.++.=+=+ ...+...++.. +++. +++.+.+.+.++.+. + .+.++.+...|
T Consensus 254 a~~iv~~~~~~~GQ~C~a~~~v~V~-~~i~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g 331 (462)
T PF00171_consen 254 AEAIVRGAFFNSGQSCTAPSRVLVH-ESIY-DEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEG 331 (462)
T ss_dssp HHHHHHHHHGGGGTSTTSEEEEEEE-HHHH-HHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTT
T ss_pred cccccchhccccccccccccccccc-cccc-chhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccc
Confidence 7666543222 22333344333 3353 777777777776551 0 12333333211
Q ss_pred --------------------------------------------eEEEeCCHHHHHHHhhhhcccc--ceecccCh---H
Q 013679 305 --------------------------------------------FMVFARDMLEGISFSNLYAPEH--LIVNVKDA---E 335 (438)
Q Consensus 305 --------------------------------------------~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p---~ 335 (438)
.++.++|+|||++++|.. +-. ..|.++|. .
T Consensus 332 a~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~a~v~s~d~~~~~ 410 (462)
T PF00171_consen 332 AKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDS-EYGLTASVFSRDESRAE 410 (462)
T ss_dssp SEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHS-SEESEEEEECSBHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhccccc-CCCceeEEecccccccc
Confidence 134478999999999984 333 45567774 4
Q ss_pred HHHhhcccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeE
Q 013679 336 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 336 ~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 391 (438)
.+..++ ++|.|+++.++.. .++. +|-+| +.|+.|.-+++.|++.-|+
T Consensus 411 ~~~~~l-~~g~v~iN~~~~~-------~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 411 RLARRL-EAGRVWINDPPTG-------DPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HHHHHS-TSSEEEESSSSTG-------GTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred cccccc-cccceeecCCccc-------cccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 566677 8999999976322 2233 66665 7788888888888887664
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.16 Score=58.12 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=68.1
Q ss_pred eEEEeCCHHHHHHHhhhh-----ccccceecccChHH---HHhhcccccccccCCCC-cccccccccCCCCCCCC----C
Q 013679 305 FMVFARDMLEGISFSNLY-----APEHLIVNVKDAEK---WESIIENAGSVFLGEWT-PESVGDYASGTNHVLPT----Y 371 (438)
Q Consensus 305 ~ii~v~~l~ea~~~~N~~-----APEHLel~~~~p~~---~l~~i~nAGaiFlG~~s-p~a~GDY~aGpNHvLPT----~ 371 (438)
.++.++|+|||++++|.. .+--+.|.++|... +..++ .+|.|++...+ -..+||+..+-++-||= +
T Consensus 349 ~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l-~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~~ 427 (862)
T PRK13805 349 AMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRM-KACRILVNTPSSQGGIGDLYNKLAPSLTLGCGSW 427 (862)
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhC-CccEEEEeCCccccccccccCCcCccccccccCC
Confidence 456689999999999984 34448889988753 44455 68999998654 56789988888888885 6
Q ss_pred CccccccCcccccccceeeEE
Q 013679 372 GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 372 G~AR~~sgLsv~~FlK~~s~~ 392 (438)
|..++.+..++.+|....++.
T Consensus 428 g~~~~~g~~g~~~~~~~k~v~ 448 (862)
T PRK13805 428 GGNSVSENVGAKHLLNIKTVA 448 (862)
T ss_pred CCCcCCCCCCHHHhheeeeee
Confidence 778899999999998777655
|
|
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.58 Score=49.18 Aligned_cols=253 Identities=17% Similarity=0.183 Sum_probs=144.6
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCc-hhhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~-eIy~v- 182 (438)
.|.....+..|+.-|+++.|- -||. +.+...+||-.+|..=|+- |+. .-.... .+..+.+.+|.. .++.+
T Consensus 106 ~~~~~~~~~~P~GVv~~i~p~---N~P~~~~~~~l~~ALaaGN~VVlK--ps~-~~~~~~~~l~~~l~~aGlP~g~~~~v 179 (452)
T cd07102 106 DGFERYIRREPLGVVLIIAPW---NYPYLTAVNAVIPALLAGNAVILK--HSP-QTPLCGERFAAAFAEAGLPEGVFQVL 179 (452)
T ss_pred CCeeEEEEEEeccEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEE--CCC-CCcHHHHHHHHHHHhcCCCcCcEEEE
Confidence 466666789999999999995 3554 3455678999999764433 332 111222 233455666653 23222
Q ss_pred -chHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 -GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 -GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
|+.....+|.- -|.||+|+==|..-+- +++.+. . |... +.|.+ -+|-|++||.+.+|..++
T Consensus 180 ~g~~~~~~~L~~----~~~v~~V~fTGs~~~g~~v~~~a~~~~~-~----v~le-lgG~~--~~iV~~dADl~~aa~~i~ 247 (452)
T cd07102 180 HLSHETSAALIA----DPRIDHVSFTGSVAGGRAIQRAAAGRFI-K----VGLE-LGGKD--PAYVRPDADLDAAAESLV 247 (452)
T ss_pred eCCchhHHHHhc----CCCCCEEEEECcHHHHHHHHHHHHhcCC-c----EEEE-CCCCC--ceEEcCCCCHHHHHHHHH
Confidence 22233333332 3788988766655432 111111 1 2222 24555 334466799999988887
Q ss_pred hccCcCC----CC-ceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc------
Q 013679 256 SQAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG------ 302 (438)
Q Consensus 256 aQAEHd~----~a-~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~------ 302 (438)
..+=... .+ +-++| .++.. +++.+.+.+.+..+. . .+.+..++.
T Consensus 248 ~~~~~~~GQ~C~a~~~v~V--~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl 324 (452)
T cd07102 248 DGAFFNSGQSCCSIERIYV--HESIY-DAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARAL 324 (452)
T ss_pred HHHHHhCCCCCcCCcEEEE--eHHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 6554432 12 23444 33453 666666666554431 0 011122211
Q ss_pred -----------------------------------CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHh
Q 013679 303 -----------------------------------HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WES 339 (438)
Q Consensus 303 -----------------------------------~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~ 339 (438)
.| .++.++|+|||++++|.. +-+ ..|.++|+.. +..
T Consensus 325 ~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~~~~~~~ 403 (452)
T cd07102 325 IDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDS-EYGLTASVWTKDIARAEALGE 403 (452)
T ss_pred eCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHH
Confidence 12 234478999999999964 222 5677888854 566
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 391 (438)
+++ +|.|++...+. .++.+|-+| ..|+.|..+++.|++..++
T Consensus 404 ~l~-~G~v~iN~~~~---------~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~ 450 (452)
T cd07102 404 QLE-TGTVFMNRCDY---------LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450 (452)
T ss_pred HcC-cceEEECCCCC---------CCCCCCCCCccccccCccchHHHHHHHhceeEE
Confidence 664 89999997531 223356544 5788887788888886665
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.4 Score=50.57 Aligned_cols=254 Identities=17% Similarity=0.159 Sum_probs=139.7
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v- 182 (438)
+|.....++.|+.-|+++.|= -||- +.+..++||-.+|..=|+--+|-. ..... +....+.+|.. .++.+
T Consensus 109 ~~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~AL~aGN~Vilkps~~~---p~~~~~l~~~l~~aglP~~vv~~v 182 (457)
T cd07114 109 GDYLNFTRREPLGVVAAITPW---NSPLLLLAKKLAPALAAGNTVVLKPSEHT---PASTLELAKLAEEAGFPPGVVNVV 182 (457)
T ss_pred CCceEEEEEecceEEEEECCC---ccHHHHHHHHHHHHHhcCCeEEeECCccc---hHHHHHHHHHHHHcCcCCCcEEEE
Confidence 455566788999999999995 3554 445577899999987665433321 11222 22344455543 22222
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEe--cCCcH----HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIF--GPGNQ----YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIv--GPGN~----yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |.+.-.+|. .-|.+|+|+ |.-.. +-.+||++.- |-. -+..---+|-|++||.+.+|.++
T Consensus 183 ~g~~~~~~~~l~----~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~-----~~l---elgG~~~~iV~~dAdl~~aa~~i 250 (457)
T cd07114 183 TGFGPETGEALV----EHPLVAKIAFTGGTETGRHIARAAAENLAP-----VTL---ELGGKSPNIVFDDADLDAAVNGV 250 (457)
T ss_pred eCCCchHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcCCe-----EEE---ecCCCCeeEECCCCCHHHHHHHH
Confidence 2 222223332 246788877 53332 2222222110 111 11123346667889999888777
Q ss_pred hhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhc------
Q 013679 255 LSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALG------ 302 (438)
Q Consensus 255 LaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~------ 302 (438)
+.= +=..-.+...++. .++.. ++..+.+.++++.+. . .+.+.++.+
T Consensus 251 ~~~~~~~~GQ~C~a~~~v~V-~~~v~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l 328 (457)
T cd07114 251 VAGIFAAAGQTCVAGSRLLV-QRSIY-DEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVL 328 (457)
T ss_pred HHHHHhccCCCCCCCceEEE-cHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 642 2222233333444 33443 666666666655441 0 111111110
Q ss_pred ------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHH
Q 013679 303 ------------------------------------HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWE 338 (438)
Q Consensus 303 ------------------------------------~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l 338 (438)
.| .++-++|+|||++++|.. +.. ..|.++|+. +++
T Consensus 329 ~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~-~~gL~~~ift~d~~~~~~~~ 407 (457)
T cd07114 329 TGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDS-EYGLAAGIWTRDLARAHRVA 407 (457)
T ss_pred eCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCC-CcCceeEEECCCHHHHHHHH
Confidence 01 235578999999999987 444 456777774 467
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
.++ .+|.|++..... .+..+|-+ |..|+.|.-+++.|++..++
T Consensus 408 ~~l-~~g~v~iN~~~~---------~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~ 455 (457)
T cd07114 408 RAI-EAGTVWVNTYRA---------LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455 (457)
T ss_pred Hhc-CcceEEECCCCC---------CCCCCCCCCCccCcCCccchHHHHHHHhceeEE
Confidence 777 589999997432 11234554 66777777777788876665
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.48 Score=49.23 Aligned_cols=338 Identities=13% Similarity=0.139 Sum_probs=172.2
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP-ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a-~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
.+-.+.++.+.+.++++-|+=....++...+. ++.. .+..++.. ....+ +..++++++.|......-.....
T Consensus 16 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~-~~~~--~~~~~~~~~~~~~e----v~~~~~~~~~~a~~~~~~~~~~~ 88 (397)
T cd07077 16 EQRDLIINAIANALYDTRQRLASEAVSERGAY-IRSL--IANWIAMMGCSESK----LYKNIDTERGITASVGHIQDVLL 88 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcc--cHHHHHHhCCcHHH----HHHHHHHHHHHHHhcCcccceEe
Confidence 34445556666666666665444444444321 1110 11111111 11122 55666667666542111111111
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH----HHHHHHcCC-chh
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV----LYCAKKAGV-THI 179 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i----L~AA~l~Gv-~eI 179 (438)
...+ ..-.++.|+.-|+++.|. . ||-..+...+||-.+|..-|+=.+|- . ...... +..+..+|. ..+
T Consensus 89 ~~~~-~~~~~~~P~Gvv~~i~p~-N--~P~~~~~~~~~aL~aGN~vilKps~~--~-p~~~~~l~~~~~~~~~~g~p~~~ 161 (397)
T cd07077 89 PDNG-ETYVRAFPIGVTMHILPS-T--NPLSGITSALRGIATRNQCIFRPHPS--A-PFTNRALALLFQAADAAHGPKIL 161 (397)
T ss_pred cCCC-ceEEEEecceEEEEEeCC-C--CchHHHHHHHHHHHcCCcEEEEcCcc--h-hhHHHHHHHHHHHHhhcCCCCce
Confidence 1123 345789999999999994 4 44447788999999998866554332 1 222222 222222244 233
Q ss_pred hh-c-c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 180 LK-A-G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 180 y~-v-G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
+. + | |.+...+|. +-|.||+|+==|+.=+..+ .+.... .-+ +.-|+.--.+|-|++||++.++..++
T Consensus 162 v~~v~~~~~~~~~~l~----~~~~vd~v~ftGs~~~~~~v~~~~~~----~~~-~~~~gg~~~~iv~~dad~~~a~~~~~ 232 (397)
T cd07077 162 VLYVPHPSDELAEELL----SHPKIDLIVATGGRDAVDAAVKHSPH----IPV-IGFGAGNSPVVVDETADEERASGSVH 232 (397)
T ss_pred EEEecCCCHHHHHHHH----cCCCCCEEEecCCHHHHHHHHHcCCC----Cce-EEecCCcceEEEcCCCCHHHHHHHHH
Confidence 22 2 4 444333332 1367999987777654322 111111 112 33344444677777899998665554
Q ss_pred hccCcCCC---C-ceEEEecCchhhHHHHHHHHHHHHhc----CCCHH---H------HHHhhc--CC---eEEEeCCHH
Q 013679 256 SQAEHGPD---S-QVVLVIVGDGVDLDAIEQEISKQCQS----LPRGE---F------ASKALG--HS---FMVFARDML 313 (438)
Q Consensus 256 aQAEHd~~---a-~~vLvt~s~~la~~~V~~ei~~ql~~----l~r~~---i------a~~sl~--~g---~ii~v~~l~ 313 (438)
-=+=.+-. + +-++|-.| .. ++..+++.+++.. +.... . ...+.+ .| .++-++|.|
T Consensus 233 ~~~~~~GQ~C~a~~~v~V~~~--i~-d~~~~~l~~~~~~~G~~~~~g~~~~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~ 309 (397)
T cd07077 233 DSKFFDQNACASEQNLYVVDD--VL-DPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEALESMTPLECQFRVLDVI 309 (397)
T ss_pred HhhccCCccCCCCeEEEEehh--hh-HHHHHHHHHHHHhcCcCcCCCceeeEEeccCCCChhhhhhhCceeEEEEEcchH
Confidence 32222211 2 23444433 32 4444444444443 11100 0 000111 23 345578896
Q ss_pred ----HHHHHhhhhc-cccceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCC--CCCcccccc-Cccc
Q 013679 314 ----EGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLP--TYGYARMYG-GVSL 382 (438)
Q Consensus 314 ----ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP--T~G~AR~~s-gLsv 382 (438)
+|++++|.-- +--..|.+.|... +..+++ +|.|++...+....|..+. -=.-. ++|..|+.+ +.++
T Consensus 310 eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~-~G~v~vN~~~~~~~~~~~~--~gg~~~~~SG~g~~~g~~~~~ 386 (397)
T cd07077 310 SAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYID-TASFYPNESSKKGRGAFAG--KGVERIVTSGMNNIFGAGVGH 386 (397)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCC-EEEEEEeCCccCCCccccC--CCcceEEEccccCCCCCCCCh
Confidence 5555667654 2236777877754 555665 8999999765443333321 11223 688899999 9999
Q ss_pred ccccceeeEE
Q 013679 383 DSFLKYMTVQ 392 (438)
Q Consensus 383 ~~FlK~~s~~ 392 (438)
+.|+...+++
T Consensus 387 ~~~~~~k~v~ 396 (397)
T cd07077 387 DALRPLKRLV 396 (397)
T ss_pred HHhcceeEee
Confidence 9999887765
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.29 Score=51.43 Aligned_cols=247 Identities=11% Similarity=0.116 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHhccCC-CceE--EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 82 FDVAYNNIYAFHLAQKSA-ETSV--ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~~-~~~~--~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
++.+++.++.|.+.-.+- .... ...+|...-.++.|+.-||+..|- + |-..++.++||-.||+. |++-|..
T Consensus 65 v~~~~~~~~~~a~~a~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw---~-p~~~~~~~~~ALaaGN~--vVlKps~ 138 (398)
T TIGR00407 65 LKGIADGVKDVIELADPVGKVIDGRELDSGLTLERVRVPLGVLGVIYEA---R-PNVTVDIASLCLKTGNA--VILRGGK 138 (398)
T ss_pred HHHHHHHHHHHhcCCCCCcccccceecCCCceEEEEEeCcEEEEEEeCC---C-chHHHHHHHHHHHhCCe--EEECCCh
Confidence 567777777665432221 1111 123566667789999999999997 3 56667788999999984 4444542
Q ss_pred CCCCCCHH---HHH-H----HHHcCCch-hhh-c-c-hHHHH-HHHhhcCCCCCCceEEecCCcHHH--HHHHHHhcCCC
Q 013679 159 QDGSICKE---VLY-C----AKKAGVTH-ILK-A-G-GAQAI-SAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSE 223 (438)
Q Consensus 159 ~~G~i~p~---iL~-A----A~l~Gv~e-Iy~-v-G-GAQAI-AAlAyGTetIp~VDkIvGPGN~yV--~~AK~~v~~~~ 223 (438)
-.|. .|+ . ...+|..+ ++. + | |...+ ++|. +=|+||+|.==|..=| ..++. ...
T Consensus 139 ----~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~----~~~~v~~v~fTGs~~vg~~~~~~-~~~-- 207 (398)
T TIGR00407 139 ----EAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELVSELLD----LDEYIDLLIPRGGNGLVRLIKQT-STI-- 207 (398)
T ss_pred ----hhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHh----CCCCeeEEEecCCHHHHHHHHHh-CCC--
Confidence 2221 111 1 33566532 322 1 2 33333 3344 3477999875555222 22222 111
Q ss_pred CcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-CcCC--CC-ceEEEecCchhhHHHHHHHHHHHHhcCC----CHH
Q 013679 224 AMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-EHGP--DS-QVVLVIVGDGVDLDAIEQEISKQCQSLP----RGE 295 (438)
Q Consensus 224 ~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA-EHd~--~a-~~vLvt~s~~la~~~V~~ei~~ql~~l~----r~~ 295 (438)
.-+=..-|-+ -+|-|++||.+.+|-.++.=+ -++- .+ .-++|-.+ +. ++..+.+.+.+..+. ..+
T Consensus 208 --~~~~e~gGk~--p~iV~~dADl~~Aa~~iv~~~~~~GQ~C~a~~rv~V~~~--v~-d~f~~~l~~~~~~~~~~~~~~~ 280 (398)
T TIGR00407 208 --PVLGHGDGIC--HIYLDESADLIKAIKVIVNAKTQRPSTCNAIETLLVNKA--IA-REFLPVLENQLLEKGVTIHADA 280 (398)
T ss_pred --CEEEecCCcc--eEEEeCCCCHHHHHHHHHhhhcCCCCcccccceEEEeHH--HH-HHHHHHHHHHHHhcCCEEecCH
Confidence 1122223433 344455699998776655432 2221 12 22444323 43 555555555554332 111
Q ss_pred HHHHh---------------hc---CC---eEEEeCCHHHHHHHhhhhccc--cceecccChHH---HHhhccccccccc
Q 013679 296 FASKA---------------LG---HS---FMVFARDMLEGISFSNLYAPE--HLIVNVKDAEK---WESIIENAGSVFL 349 (438)
Q Consensus 296 ia~~s---------------l~---~g---~ii~v~~l~ea~~~~N~~APE--HLel~~~~p~~---~l~~i~nAGaiFl 349 (438)
.+.+- +. .| .++.++|+|||++++|.+ +- ...|.++|... +..+++ +|.|++
T Consensus 281 ~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~-~~GL~a~I~t~d~~~a~~~a~~i~-~G~v~i 358 (398)
T TIGR00407 281 YALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQY-GTQHSDAILTENKANAEQFQNGVD-SAAVYH 358 (398)
T ss_pred HHHHHHhccCccccccccccccchhhCceeEEEEECCHHHHHHHHHHh-CCCCceEEEeCCHHHHHHHHHhCC-eeEEEE
Confidence 11111 11 13 345589999999999997 33 46888999754 566665 899999
Q ss_pred CCCCc
Q 013679 350 GEWTP 354 (438)
Q Consensus 350 G~~sp 354 (438)
...+.
T Consensus 359 N~~~~ 363 (398)
T TIGR00407 359 NASTR 363 (398)
T ss_pred eCCCC
Confidence 97654
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.53 Score=49.74 Aligned_cols=263 Identities=15% Similarity=0.174 Sum_probs=142.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
|...-.++.|+.-|+++.| .-||- +++...+||-.+|..=|+- |+. .-..... +......+|.. .++.+
T Consensus 124 ~~~~~~~~~P~Gvv~~I~p---~N~P~~~~~~~~~~AL~aGN~VVlK--ps~-~~p~~~~~l~~~~~~aglP~gvv~~v~ 197 (468)
T cd07088 124 NENIFIFKVPIGVVAGILP---WNFPFFLIARKLAPALVTGNTIVIK--PSE-ETPLNALEFAELVDEAGLPAGVLNIVT 197 (468)
T ss_pred cceeEEEEecceeEEEEcc---CchHHHHHHHHHHHHHHcCCEEEEE--CCC-cchHHHHHHHHHHHHcCcCccceEEEe
Confidence 4344466799999999999 35674 4566889999999764433 431 1111122 22344455554 33322
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccC-
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE- 259 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE- 259 (438)
| |...-.+|. .-|.+|+|.==|...+-.. .+........+-..+- |-+= +|-|++||.+..|-+++.-+=
T Consensus 198 g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelG-G~~~--~iV~~dadl~~aa~~iv~~~~~ 270 (468)
T cd07088 198 GRGSVVGDALV----AHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELG-GKAP--AIVMKDADLDLAVKAIVDSRII 270 (468)
T ss_pred cCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECC-CCCe--EEECCCCCHHHHHHHHHHHHhc
Confidence 2 232222232 3578999866666443211 0011100001222221 4443 455677999988777764222
Q ss_pred c---CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC-----------
Q 013679 260 H---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH----------- 303 (438)
Q Consensus 260 H---d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~----------- 303 (438)
+ .-.+...++. .++.. ++..+.+.+.++.+. . .+.+..++.+
T Consensus 271 ~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~ 348 (468)
T cd07088 271 NCGQVCTCAERVYV-HEDIY-DEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRP 348 (468)
T ss_pred ccCcCCcCCeEEEE-cHHHH-HHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 2 2223333444 33353 666666666665542 0 0222222111
Q ss_pred ----------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccccccc
Q 013679 304 ----------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGSV 347 (438)
Q Consensus 304 ----------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAGai 347 (438)
| .++.++|+|||++++|.. |-. ..|.++|+. .++.++ .+|.|
T Consensus 349 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l-~~g~v 426 (468)
T cd07088 349 EGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDS-EYGLTSYIYTENLNTAMRATNEL-EFGET 426 (468)
T ss_pred CCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhC-CcceE
Confidence 1 345578999999999985 333 477788875 466666 47999
Q ss_pred ccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeE
Q 013679 348 FLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 348 FlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 391 (438)
+++..+.....-.+.| ...+|..|+.|..+++.|++..++
T Consensus 427 ~iN~~~~~~~~~p~gG----~k~SG~G~~~g~~~l~~~t~~k~v 466 (468)
T cd07088 427 YINRENFEAMQGFHAG----WKKSGLGGADGKHGLEEYLQTKVV 466 (468)
T ss_pred EECCCCCCCCCCCcCC----cccccCCcCchHHHHHHHhceeEE
Confidence 9997654322111122 135577888887888888876655
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.7 Score=48.57 Aligned_cols=256 Identities=19% Similarity=0.163 Sum_probs=147.5
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCc-hhhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~-eIy~v- 182 (438)
+|...-.++.|+.-|++..|. -||- ..++..+||-.+|..=|+-.+|- . ...+ .+..+...+|.. .++.+
T Consensus 109 ~~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~l~~ALaaGN~vilKps~~--~-p~~~~~l~~~l~~ag~P~g~~~vv 182 (453)
T cd07099 109 PNKKATVEYRPYGVVGVISPW---NYPLLTPMGDIIPALAAGNAVVLKPSEV--T-PLVGELLAEAWAAAGPPQGVLQVV 182 (453)
T ss_pred CCceeEEEEecceEEEEECCC---ChHHHHHHHHHHHHHHcCCEEEEECCcc--c-hHHHHHHHHHHHHcCCCCCeEEEE
Confidence 344556788999999999994 4664 44567899999998765543331 1 1222 233466777776 65544
Q ss_pred -chHHHHHHHhhcCCCCCCceEEecCCcHHHHH------HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 -GGAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 -GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~------AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
|+...-.+|. + .+||+|.==|+.-|-. |+++. .|...+ .|-+ -+|-|++||.+.++-.++
T Consensus 183 ~g~~~~~~~l~---~--~~vd~V~ftGs~~~g~~i~~~aa~~~~-----~~~lel-gG~~--p~iV~~dadl~~a~~~i~ 249 (453)
T cd07099 183 TGDGATGAALI---D--AGVDKVAFTGSVATGRKVMAAAAERLI-----PVVLEL-GGKD--PMIVLADADLERAAAAAV 249 (453)
T ss_pred eCCchHHHHHh---c--CCCCEEEEECCHHHHHHHHHHHHhcCC-----eEEEEC-CCCC--eEEECCCCCHHHHHHHHH
Confidence 3223323333 2 2589998888766522 22211 122222 3555 344556699998877776
Q ss_pred hccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C--------------H----HHHHHhhc-------
Q 013679 256 SQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R--------------G----EFASKALG------- 302 (438)
Q Consensus 256 aQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r--------------~----~ia~~sl~------- 302 (438)
.-+=. .-.+...++. .++.. +++.+.+.+.++.+. . . +.++++.+
T Consensus 250 ~~~~~~~GQ~C~a~~ri~V-~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~ 327 (453)
T cd07099 250 WGAMVNAGQTCISVERVYV-HESVY-DEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALT 327 (453)
T ss_pred HHHHhcCCCCCCCCcEEEE-cHHHH-HHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 43222 2233333444 34453 677777766666542 0 0 11121110
Q ss_pred -------CC---------------------------eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccc
Q 013679 303 -------HS---------------------------FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIEN 343 (438)
Q Consensus 303 -------~g---------------------------~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~n 343 (438)
.| .|+-++|.|||++++|.. +-. ..|.++|.. .+..+++
T Consensus 328 gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~~~~~~~~l~- 405 (453)
T cd07099 328 GGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDS-RYGLSASVFSRDLARAEAIARRLE- 405 (453)
T ss_pred CCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHHHhCC-
Confidence 01 233468899999999984 333 467788874 4778887
Q ss_pred ccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 344 AGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 344 AGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+|.|+++..+.. ..++-+|-+ |..|+.|.-+++.|.+..++.
T Consensus 406 ~G~v~iN~~~~~-------~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 406 AGAVSINDVLLT-------AGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred eeeEEECCCCCC-------CCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 899999976321 123445554 455666666667777766553
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.84 Score=48.05 Aligned_cols=259 Identities=17% Similarity=0.143 Sum_probs=139.4
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc-hhhhc--c
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILKA--G 183 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~-eIy~v--G 183 (438)
|...-.++.|+.-|+++.|- .+|+ +..+...+||-.+|..=|+--+|-. ...... ....+.+|+. .++.+ |
T Consensus 114 ~~~~~~~~~P~Gvv~~I~p~-N~P~-~~~~~~~~~ALaaGN~VIlKps~~~---p~~~~~l~~~l~~ag~P~g~v~~v~g 188 (452)
T cd07147 114 GRQGLVRRFPIGPVSAITPF-NFPL-NLVAHKVAPAIAAGCPFVLKPASRT---PLSALILGEVLAETGLPKGAFSVLPC 188 (452)
T ss_pred CceeEEEEeceeEEEEEcCC-CcHH-HHHHHHHHHHHHcCCEEEEECCCCC---cHHHHHHHHHHHHcCCCcCcEEEEeC
Confidence 33334567899999999994 4454 6666678899999987555433311 122222 2344556653 33222 3
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh----cc
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS----QA 258 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa----QA 258 (438)
+.....+|. .=|+||+|.==|..=+-.. .+..+.. .|...+ .|.+= +|-|++||.+..|-.++. -+
T Consensus 189 ~~~~~~~l~----~~~~v~~v~fTGs~~~g~~v~~~a~~~--~v~lel-gG~~p--~iV~~dadl~~aa~~i~~~~~~~~ 259 (452)
T cd07147 189 SRDDADLLV----TDERIKLLSFTGSPAVGWDLKARAGKK--KVVLEL-GGNAA--VIVDSDADLDFAAQRIIFGAFYQA 259 (452)
T ss_pred CccchhHHh----cCCCCCEEEEECCHHHHHHHHHHhCcC--ceEeec-CCCCc--EEECCCCCHHHHHHHHHHHHHhcc
Confidence 332222222 2378998854443322100 1111110 133332 35553 444456899987766542 11
Q ss_pred CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh---------------
Q 013679 259 EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL--------------- 301 (438)
Q Consensus 259 EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl--------------- 301 (438)
=+.-.+...++. .++.. +++.+.+.+++..+.- .+.+..+.
T Consensus 260 GQ~C~a~~~v~V-~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~ 337 (452)
T cd07147 260 GQSCISVQRVLV-HRSVY-DEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGA 337 (452)
T ss_pred CCCCcCCcEEEE-chhHH-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCE
Confidence 122223333333 34454 7777777666655520 01111111
Q ss_pred ------------------c--CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCc
Q 013679 302 ------------------G--HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTP 354 (438)
Q Consensus 302 ------------------~--~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp 354 (438)
+ .| .|+-++|+|||++++|..--=| ..|.++|.. +++.+++ +|.|+++..+.
T Consensus 338 ~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~-~G~v~vN~~~~ 416 (452)
T cd07147 338 LLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELE-VGGVVINDVPT 416 (452)
T ss_pred EEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcC-cceEEECCCCC
Confidence 1 12 2345799999999999752222 667787864 4666664 99999997543
Q ss_pred ccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 355 ESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 355 ~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
... + -+|- +|..|+.|.-+++.|.+..++
T Consensus 417 ~~~-~-------~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i 450 (452)
T cd07147 417 FRV-D-------HMPYGGVKDSGIGREGVRYAIEEMTEPRLL 450 (452)
T ss_pred CCC-C-------CCCcCCccccccCCCChHHHHHHhcceeEE
Confidence 211 1 2344 556788888888889886654
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.18 Score=53.32 Aligned_cols=256 Identities=15% Similarity=0.125 Sum_probs=139.2
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--c-
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--G- 183 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v--G- 183 (438)
..-.++.|+.-|++..|- -||-.. +...+||-.+|..=|+-.+|-. ..... +....+.+|+. .++.+ |
T Consensus 113 ~~~~~~~P~Gvv~~I~P~---N~P~~~~~~~~~~ALaaGN~VilKps~~~---p~~~~~l~~~l~~aglP~g~v~~v~g~ 186 (451)
T cd07146 113 KIFTLREPLGVVLAITPF---NHPLNQVAHKIAPAIAANNRIVLKPSEKT---PLSAIYLADLLYEAGLPPDMLSVVTGE 186 (451)
T ss_pred eEEEEEeccceEEEEccC---ChHHHHHHHHHHHHHHcCCEEEEECCCCc---hHHHHHHHHHHHHcCcCccceEEEecC
Confidence 344678899999999995 355433 4466899999987555433321 11222 23344556653 33332 3
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcC-
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG- 261 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd- 261 (438)
|...-.+|. +-|.+|+|+==|..=+-.+ .+.-... .+-..+ .|-+= +|-|++||.+.++..++.-+=+.
T Consensus 187 ~~~~~~~l~----~~~~i~~V~fTGs~~~g~~i~~~a~~~--~~~lEl-GG~~p--~iV~~daDl~~aa~~i~~~~~~~~ 257 (451)
T cd07146 187 PGEIGDELI----THPDVDLVTFTGGVAVGKAIAATAGYK--RQLLEL-GGNDP--LIVMDDADLERAATLAVAGSYANS 257 (451)
T ss_pred chHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHhcCC--ceeeec-CCCce--EEECCCCCHHHHHHHHHHHHHhhC
Confidence 333222332 2478898855554322111 0000100 133333 35443 35556799998887776433222
Q ss_pred ---CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C--------------H----HHHHHhhcCC------------
Q 013679 262 ---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R--------------G----EFASKALGHS------------ 304 (438)
Q Consensus 262 ---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r--------------~----~ia~~sl~~g------------ 304 (438)
-.+...++. .++.. +++.+.+.++++.+. . . +.++++..+|
T Consensus 258 GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~ 335 (451)
T cd07146 258 GQRCTAVKRILV-HESVA-DEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA 335 (451)
T ss_pred CCCCCCCceEEE-chHHH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCE
Confidence 223333433 34453 777777777766652 1 1 1122222111
Q ss_pred --------------------------eEEEeCCHHHHHHHhhhhccc-cceecccChH---HHHhhcccccccccCCCCc
Q 013679 305 --------------------------FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KWESIIENAGSVFLGEWTP 354 (438)
Q Consensus 305 --------------------------~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~~i~nAGaiFlG~~sp 354 (438)
.|+.++|+|||++++|..--= -..|.++|+. +++.+++ +|.||++.++.
T Consensus 336 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~-~G~v~iN~~~~ 414 (451)
T cd07146 336 LYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLD-VGTVNVNEVPG 414 (451)
T ss_pred EEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCC-cceEEECCCCC
Confidence 345589999999999964322 2577888875 4777774 99999997532
Q ss_pred ccccccccCCCCCCCCCC------ccccccCcccccccceeeE
Q 013679 355 ESVGDYASGTNHVLPTYG------YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 355 ~a~GDY~aGpNHvLPT~G------~AR~~sgLsv~~FlK~~s~ 391 (438)
. ...-+|-+| ..|..|.-+++.|++..++
T Consensus 415 ~--------~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~ 449 (451)
T cd07146 415 F--------RSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTY 449 (451)
T ss_pred C--------CCCCCCcCcccccCCCcccChHHHHHHHhceeEE
Confidence 1 112356554 2455455567777776554
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.8 Score=48.31 Aligned_cols=256 Identities=16% Similarity=0.152 Sum_probs=139.6
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
|...-.++.|+.-|+++.|- -||-. .+...+||-.+|..=|+- |+. .-..... +......+|.. .++.+
T Consensus 107 ~~~~~~~~~P~GVV~~I~p~---N~P~~~~~~~~~~ALaaGN~Vv~K--ps~-~~~~~~~~l~~~~~~aGlP~g~~~~v~ 180 (457)
T cd07090 107 GSFAYTRREPLGVCAGIGAW---NYPIQIASWKSAPALACGNAMVYK--PSP-FTPLTALLLAEILTEAGLPDGVFNVVQ 180 (457)
T ss_pred CceEEEEEeecceEEEECCC---ccHHHHHHHHHHHHHhcCCeeeec--CCC-cCcHHHHHHHHHHHHcCCCcccEEEEe
Confidence 44455678999999999984 46744 455668999999875544 432 1112222 23344556653 33322
Q ss_pred chHHHHHHHhhcCCCCCCceEEecCCcH-----HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh-
Q 013679 183 GGAQAISAMAWGTESCPKVEKIFGPGNQ-----YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS- 256 (438)
Q Consensus 183 GGAQAIAAlAyGTetIp~VDkIvGPGN~-----yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa- 256 (438)
|+.. ++..-. .-|.+|+|.==|.. -...|.+-+-. + +=-+.|.+ -+|-|++||.+..|-+++-
T Consensus 181 g~~~-~~~~l~---~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~----~-~lelgG~~--p~iV~~dAdl~~Aa~~i~~~ 249 (457)
T cd07090 181 GGGE-TGQLLC---EHPDVAKVSFTGSVPTGKKVMSAAAKGIKH----V-TLELGGKS--PLIIFDDADLENAVNGAMMA 249 (457)
T ss_pred CChh-hHHHHh---cCCCCCEEEEECcHHHHHHHHHHHhccCCc----e-EEecCCCC--ceEECCCCCHHHHHHHHHHH
Confidence 4333 332111 34778988443332 11222110000 1 01123443 3445667899987776662
Q ss_pred ---ccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHh-----------
Q 013679 257 ---QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKA----------- 300 (438)
Q Consensus 257 ---QAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~s----------- 300 (438)
.+=..-.+...++.. ++.. ++..+.+.++++.+. . .+.+.++
T Consensus 250 ~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg 327 (457)
T cd07090 250 NFLSQGQVCSNGTRVFVQ-RSIK-DEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGG 327 (457)
T ss_pred HHhcCCCCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 222333343444443 3343 666666666665542 1 0111111
Q ss_pred -----------------------------h--c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhc
Q 013679 301 -----------------------------L--G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 341 (438)
Q Consensus 301 -----------------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i 341 (438)
+ + .| .++.++|+|||++++|..--=| ..|.++|+. .++.++
T Consensus 328 ~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l 407 (457)
T cd07090 328 ERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQL 407 (457)
T ss_pred CcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhC
Confidence 1 1 12 3455899999999999863222 566777775 466677
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+ +|.|++..... ++ .-+|- +|..|+.|.-+++.|.+.-++.
T Consensus 408 ~-~G~v~iN~~~~---~~------~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~ 453 (457)
T cd07090 408 Q-AGTCWINTYNI---SP------VEVPFGGYKQSGFGRENGTAALEHYTQLKTVY 453 (457)
T ss_pred C-cCeEEECCCCC---CC------CCCCcCCCccCcCCccchHHHHHHHhCeEEEE
Confidence 5 79999997432 22 12454 4567787778888888876654
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=96.58 E-value=1.3 Score=46.93 Aligned_cols=327 Identities=16% Similarity=0.144 Sum_probs=169.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-cCCCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN-VSELPDPELDAAVKEAFDVAYNNIYAFHLAQ-KSAET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~-~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q-~~~~~ 101 (438)
...+-.+.++.+.+.++++.|+=..-.++...+- +... ..|+ ...++.++.++++++++...+ ++...
T Consensus 40 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~~~~~~ev------~~~i~~~~~~~~~~~~~~~~~~~~~~~ 109 (459)
T cd07089 40 DAEERARCLRQLHEALEARKEELRALLVAEVGAP----VMTARAMQV------DGPIGHLRYFADLADSFPWEFDLPVPA 109 (459)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HHHHHHHHH------HHHHHHHHHHHHHHHHhcCceecCccc
Confidence 3444455666777777777666444444443321 1000 0011 134555666666666654332 12211
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 178 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e- 178 (438)
. ...+...-.++.|+.-|++..|= -|| ...+-..+||-.+|..=|+-.+|-. ..... +....+.+|..+
T Consensus 110 ~--~~~~~~~~~~~~P~GVV~~I~P~---N~P~~~~~~~~~~AL~aGN~vvlKps~~~---p~~~~~l~~~~~~aglP~g 181 (459)
T cd07089 110 L--RGGPGRRVVRREPVGVVAAITPW---NFPFFLNLAKLAPALAAGNTVVLKPAPDT---PLSALLLGEIIAETDLPAG 181 (459)
T ss_pred c--cCCCceeEEEEeeccEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEECCCCC---hHHHHHHHHHHHHcCCCcc
Confidence 0 11233445788999999999994 567 3445567899999987554433321 11112 223444566542
Q ss_pred hhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 179 ILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 179 Iy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
++.+ |....+...-. .-|++|+|.==|..-+- +|+++ . .|-..+ .|-+= +|-+++||.+.+
T Consensus 182 ~~~~v~g~~~~~~~~l~---~~~~~~~v~ftGs~~~g~~v~~~aa~~~--~---~~~lel-gG~n~--~iV~~dadl~~a 250 (459)
T cd07089 182 VVNVVTGSDNAVGEALT---TDPRVDMVSFTGSTAVGRRIMAQAAATL--K---RVLLEL-GGKSA--NIVLDDADLAAA 250 (459)
T ss_pred ceEEEecCcHHHHHHHh---cCCCCCEEEEECcHHHHHHHHHHHHhcC--C---cEEEEC-CCCCe--eEECCCCCHHHH
Confidence 2222 32222332222 34788888433333221 22211 0 122222 24443 344456899988
Q ss_pred HHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhh---
Q 013679 251 AADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKAL--- 301 (438)
Q Consensus 251 AaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl--- 301 (438)
|-.++.-+=+. -.+...++. .++.. ++..+.+.+.++.+. + .+.+..+.
T Consensus 251 a~~i~~~~~~~sGQ~C~a~~~v~V-~~~v~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~G 328 (459)
T cd07089 251 APAAVGVCMHNAGQGCALTTRLLV-PRSRY-DEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEG 328 (459)
T ss_pred HHHHHHHHHHhcCCcccCCeEEEE-cHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 88877444332 222223333 22232 555555544443331 0 11111111
Q ss_pred ------------------------------------c-CC---eEEEeCCHHHHHHHhhhhccccc--eecccChHH---
Q 013679 302 ------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAEK--- 336 (438)
Q Consensus 302 ------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~~--- 336 (438)
+ .| .|+.++|+|||++++|. .|-.| .|.++|...
T Consensus 329 a~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~-~~~gL~~~v~t~d~~~~~~ 407 (459)
T cd07089 329 ARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIAND-SDYGLSGGVWSADVDRAYR 407 (459)
T ss_pred CEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhC-CCCCCeEEEEcCCHHHHHH
Confidence 0 12 23447899999999997 34445 677888765
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..++ .+|.|++...+ ..++.+|-+| ..|+.|.-+++.|++..++.
T Consensus 408 ~~~~~-~~G~v~iN~~~---------~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 408 VARRI-RTGSVGINGGG---------GYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred HHHhc-CcCeEEECCCC---------CCCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 45555 57999999654 2345567774 67777777788888776654
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=96.55 E-value=1.3 Score=46.58 Aligned_cols=255 Identities=20% Similarity=0.212 Sum_probs=139.8
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-hhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e-Iy~v- 182 (438)
.|.....++.|+.-|+++.| .-||-. .++.++||-.+|..=|+- |+... ...+. +....+.+|..+ ++.+
T Consensus 107 ~~~~~~~~~~P~GVv~~i~p---~N~P~~~~~~~~~~AL~aGN~VIlk--ps~~~-p~~~~~l~~~l~~aglP~g~v~~v 180 (455)
T cd07093 107 GGALNYVLRQPVGVAGLITP---WNLPLMLLTWKIAPALAFGNTVVLK--PSEWT-PLTAWLLAELANEAGLPPGVVNVV 180 (455)
T ss_pred CCceEEEEEEeeeEEEEECC---CChHHHHHHHHHHHHHhcCCEEEeE--CCCcC-cHHHHHHHHHHHhcCCCccceEEE
Confidence 35555577899999999998 457744 566788999999765544 33211 12222 333445565542 2222
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |...-.+|. .-|.+|+|+==|..= -++||.+. .|-.. +.|.+= +|-|++||.+..+.++
T Consensus 181 ~g~~~~~~~~L~----~~~~i~~V~ftGs~~~g~~v~~~aa~~~~-----~~~le-lgG~~~--~iV~~dAdl~~a~~~i 248 (455)
T cd07093 181 HGFGPEAGAALV----AHPDVDLISFTGETATGRTIMRAAAPNLK-----PVSLE-LGGKNP--NIVFADADLDRAVDAA 248 (455)
T ss_pred ecCchHHHHHHh----cCCCccEEEEECCHHHHHHHHHHHhhccc-----ceEee-cCCCCc--eEECCCCCHHHHHHHH
Confidence 2 333333343 247788865555422 12222110 01111 225443 3445679999988777
Q ss_pred hhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC-----
Q 013679 255 LSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH----- 303 (438)
Q Consensus 255 LaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~----- 303 (438)
+.-+=.. -.+...++. .++.. +++.+.+.++++.+. . .+.+..+...
T Consensus 249 ~~~~~~~~GQ~C~a~~~v~v-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~ 326 (455)
T cd07093 249 VRSSFSNNGEVCLAGSRILV-QRSIY-DEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATIL 326 (455)
T ss_pred HHHHHhccCCCcCCCceEEE-cHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 7433221 123233333 34453 666666666665441 0 1122222100
Q ss_pred -------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHh
Q 013679 304 -------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWES 339 (438)
Q Consensus 304 -------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~ 339 (438)
| .++-++|.|||++++|..--=| ..|.++|.. .++.
T Consensus 327 ~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~ 406 (455)
T cd07093 327 TGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVAR 406 (455)
T ss_pred eCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 1 3455789999999999863223 557777764 4666
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
+++ +|.|++...... + ..+|.+ |+.|+.+.-++..|++..++
T Consensus 407 ~l~-~g~v~iN~~~~~---~------~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 407 RLE-AGTVWVNCWLVR---D------LRTPFGGVKASGIGREGGDYSLEFYTELKNV 453 (455)
T ss_pred hCC-cceEEECCCCCC---C------CCCCcCCCccCcCCCCchHHHHHHHhceeEE
Confidence 775 999999976532 1 125666 45566665666667765554
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.52 Score=49.87 Aligned_cols=331 Identities=15% Similarity=0.131 Sum_probs=169.0
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
..+-.+.++.+.+.++++.|+=....++..-+. +.-...| + ....+-++++++++++++....+.... .
T Consensus 43 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~~e-----v-~~~i~~~~~~~~~~~~~~~~~~~~~~~-~ 111 (455)
T cd07148 43 AHERIAILERLADLMEERADELALLIAREGGKP----LVDAKVE-----V-TRAIDGVELAADELGQLGGREIPMGLT-P 111 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHH-----H-HHHHHHHHHHHHHHHHhcCcccccccc-c
Confidence 334445566666666666665443333333211 1000001 1 133444555566655553322222111 1
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhh-
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILK- 181 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~- 181 (438)
..+|.....++.|+.-|++..|- .+|+ +..+...+||-.+|..=|+=.+|-. ......| .+.+.+|.. .++.
T Consensus 112 ~~~~~~~~~~~~P~Gvv~~I~p~-N~P~-~~~~~~~~~ALaaGN~VvlKps~~~---p~~~~~l~~~~~~aGlP~gvv~~ 186 (455)
T cd07148 112 ASAGRIAFTTREPIGVVVAISAF-NHPL-NLIVHQVAPAIAAGCPVIVKPALAT---PLSCLAFVDLLHEAGLPEGWCQA 186 (455)
T ss_pred CCCCceEEEEEecceEEEEECCC-CcHH-HHHHHHHHHHHHcCCEEEeeCCCcc---cHHHHHHHHHHHHcCCCcCcEEE
Confidence 12354566788999999999993 3333 4556678999999987665444321 1222333 345667774 4433
Q ss_pred -cchHHHHHHHhhcCCCCCCceEEecCCcHHH--HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc
Q 013679 182 -AGGAQAISAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 258 (438)
Q Consensus 182 -vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV--~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA 258 (438)
.|+...-.+|. +-|+||+|.==|..=| ..+++.-... .+-.. +.|-+= +|-|++||.+.++-+++.=+
T Consensus 187 v~g~~~~~~~L~----~~~~v~~v~fTGs~~~G~~i~~~aa~~~--~~~lE-lGG~~p--~iV~~dADl~~aa~~i~~~~ 257 (455)
T cd07148 187 VPCENAVAEKLV----TDPRVAFFSFIGSARVGWMLRSKLAPGT--RCALE-HGGAAP--VIVDRSADLDAMIPPLVKGG 257 (455)
T ss_pred EeCChHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHhhcCC--cEEEe-cCCCCc--eEECCCCCHHHHHHHHHHHH
Confidence 25544322232 3488999933333321 1111111000 12122 225553 44466799998777665422
Q ss_pred CcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhc----------
Q 013679 259 EHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALG---------- 302 (438)
Q Consensus 259 EHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~---------- 302 (438)
=.. -.+...++... +.. +++.+.+.+.++.+. . .+.++++.+
T Consensus 258 f~~~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~ 335 (455)
T cd07148 258 FYHAGQVCVSVQRVFVPA-EIA-DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGK 335 (455)
T ss_pred HhcCCCCccCCeEEEEcH-hHH-HHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCc
Confidence 221 12333333333 343 666666666555541 0 011111110
Q ss_pred --------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhccccccccc
Q 013679 303 --------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFL 349 (438)
Q Consensus 303 --------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~nAGaiFl 349 (438)
.| .|+.++|+|||++++|..- +==..|.++|+.. ++.+++ +|.+++
T Consensus 336 ~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~-~g~v~i 414 (455)
T cd07148 336 RLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLD-ATAVMV 414 (455)
T ss_pred cCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcC-cCeEEE
Confidence 02 2344799999999999752 2226788888754 566664 799999
Q ss_pred CCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 350 GEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 350 G~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
...+... .+.+|- +|..|..+.-+++.|.+..++
T Consensus 415 N~~~~~~--------~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~ 453 (455)
T cd07148 415 NDHTAFR--------VDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMA 453 (455)
T ss_pred CCCCCCC--------CCCCCCCcchhcccCCCchHHHHHHhhceeEE
Confidence 9743211 112444 456666666677777765554
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.26 Score=51.80 Aligned_cols=333 Identities=12% Similarity=0.127 Sum_probs=168.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC--CCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS--AET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~--~~~ 101 (438)
...+-.+.++.+.+.++++-|+=..-.++.+.+... --.++..+++-... +.-++.++++++.|.+.-.+ ...
T Consensus 24 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~--~g~~~~~~~~~~~~---~~ev~~~~~~~~~~a~~~~~~g~~~ 98 (417)
T PRK00197 24 STAQKNRALLAIADALEANAAEILAANAKDLAAARA--NGLSAAMLDRLLLT---EARIEGIAEGLRQVAALPDPVGEVL 98 (417)
T ss_pred CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH--cCCCHHHHHHhcCC---HHHHHHHHHHHHHHhhcCCCccccc
Confidence 344555667777777777766544444433321100 00011000000000 11255666666666432111 111
Q ss_pred eE-EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHH--------HH
Q 013679 102 SV-ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYC--------AK 172 (438)
Q Consensus 102 ~~-~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~A--------A~ 172 (438)
.. ....|...-.++.|+.-|++..| +| |...++..+||-.||+.=| +-|+. ..|.+... ..
T Consensus 99 ~~~~~~~~~~~~~~~~PlGVv~~I~p---~p-~~~~~~~~~~ALaaGN~vV--lKPs~----~tp~t~~~l~~l~~~~l~ 168 (417)
T PRK00197 99 DGWTLPNGLRIGRVRVPLGVIGVIYE---SR-PNVTVDAAALCLKSGNAVI--LRGGS----EAIHSNRALVAVIQEALE 168 (417)
T ss_pred cceecCCCceEEEEecCceEEEEEcC---CC-chHHHHHHHHHHHhCCeEE--EecCh----hhhHHHHHHHHHHHHHHH
Confidence 11 01224345567899999999998 34 5666777889999998644 44542 23322111 23
Q ss_pred HcCCc-hhhh---cchHHHHHHHhhcCCCCCCceEEecCCcHHHH--HH----HHHhcCCCCcccccCCCCCceEEEEec
Q 013679 173 KAGVT-HILK---AGGAQAISAMAWGTESCPKVEKIFGPGNQYVT--AA----KMILQNSEAMISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 173 l~Gv~-eIy~---vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~--~A----K~~v~~~~~~VgID~~AGPSEvlIiAD 242 (438)
.+|.. .++. -||...++++-- .-|+||+|.==|..=|. .+ |+++. =+-|=+ -+|.|
T Consensus 169 ~aGlP~gv~~~v~g~~~~~~~~~l~---~~~~v~~V~fTGS~~~g~~i~~~a~~~~~l---------ELGGk~--p~IV~ 234 (417)
T PRK00197 169 EAGLPADAVQLVETTDRAAVGELLK---LDGYVDVIIPRGGAGLIRRVVENATVPVIE---------HGDGIC--HIYVD 234 (417)
T ss_pred HcCcChhhEEEecCCChHHHHHHhc---cCCCccEEEecCCHHHHHHHHHhcCCCEEe---------ecCCcc--eEEEe
Confidence 45553 3333 234444444332 24778887644443221 11 22211 122322 24556
Q ss_pred CCCCHHHHHHhhhhccCcCCC---CceEEEecCchhhHHHHHHHHHHHHhcCCC-----HH---HH-------HHhhc--
Q 013679 243 IYASPVHIAADLLSQAEHGPD---SQVVLVIVGDGVDLDAIEQEISKQCQSLPR-----GE---FA-------SKALG-- 302 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAEHd~~---a~~vLvt~s~~la~~~V~~ei~~ql~~l~r-----~~---ia-------~~sl~-- 302 (438)
++||.+.+|...+.=+=...- +...++. .++.. ++..+.+.+.++.+.- .. +. ..-+.
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE 312 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPSVCNALETLLV-HEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTE 312 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCcccccceEEEE-EHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhh
Confidence 779999988887754433222 1112222 22343 6666665555555431 00 00 01111
Q ss_pred -CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCCcc
Q 013679 303 -HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYA 374 (438)
Q Consensus 303 -~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~A 374 (438)
.| .|+-++|.|||++++|.---=| ..+.++|... +..++ .+|.|++..++....+ +|.=.-..+|..
T Consensus 313 ~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l-~~G~v~VN~~~~~~~~----~p~G~~~~sG~g 387 (417)
T PRK00197 313 YLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEV-DSAAVYVNASTRFTDG----GEFGLGAEIGIS 387 (417)
T ss_pred hhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhC-CeeEEEEeCCCccCCC----Cccccchhheee
Confidence 24 4566899999999999874333 7888999754 44455 5999999976532211 111111222223
Q ss_pred ----ccccCcccccccceeeEE
Q 013679 375 ----RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 375 ----R~~sgLsv~~FlK~~s~~ 392 (438)
|..|..++++|++.-++.
T Consensus 388 ~~~~~~~g~~~l~~~~~~k~v~ 409 (417)
T PRK00197 388 TQKLHARGPMGLEELTTYKYIV 409 (417)
T ss_pred cCCCcCCCccchHhhcEEEEEE
Confidence 556777888898866654
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=96.45 E-value=1.4 Score=45.83 Aligned_cols=259 Identities=19% Similarity=0.234 Sum_probs=139.7
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCC-H-HHHHHHHHcCCch----h
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSIC-K-EVLYCAKKAGVTH----I 179 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~-p-~iL~AA~l~Gv~e----I 179 (438)
+|...-.++.|+.-|++..| .-||- +.+...+||-.+|..=|+-.+|-. ... . .+..+.+.+|..+ +
T Consensus 88 ~g~~~~~~~~P~GVv~~i~p---~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~---p~~~~~~l~~~l~~aGlP~gvv~~ 161 (431)
T cd07104 88 PGKESMVRRVPLGVVGVISP---FNFPLILAMRSVAPALALGNAVVLKPDSRT---PVTGGLLIAEIFEEAGLPKGVLNV 161 (431)
T ss_pred CCceeEEEEeeeeeEEEECC---CCcHHHHHHHHHHHHHHcCCeEEeeCCCCC---hHHHHHHHHHHHHHcCCCcccEEE
Confidence 45555678899999999999 34554 344577899999987665433311 011 1 1233445566542 2
Q ss_pred hhcchHHHHHHHhhcCCCCCCceEEecCCcHHHH--HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh-
Q 013679 180 LKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS- 256 (438)
Q Consensus 180 y~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~--~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa- 256 (438)
..-.+...-.+|. .-|++|+|+=-|+.=+- .+|+.-.. ...+-.-+ .|-+ -+|.|++||.+.+|.+++.
T Consensus 162 v~g~~~~~~~~L~----~~~~i~~V~ftGs~~~g~~v~~~aa~~-~~~~~lel-gG~~--~~iV~~dadl~~aa~~i~~~ 233 (431)
T cd07104 162 VPGGGSEIGDALV----EHPRVRMISFTGSTAVGRHIGELAGRH-LKKVALEL-GGNN--PLIVLDDADLDLAVSAAAFG 233 (431)
T ss_pred eeCCchhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhc-CCcEEEEc-CCCC--eEEECCCCCHHHHHHHHHHH
Confidence 2212332222232 24789988544443331 11211100 00122222 1333 5666778999998888763
Q ss_pred ccCcC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHh-----------
Q 013679 257 QAEHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKA----------- 300 (438)
Q Consensus 257 QAEHd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~s----------- 300 (438)
--.|. ..+...++.. ++.. +++.+.+.+++..+. . .+.+..+
T Consensus 234 ~~~~~GQ~C~a~~~v~v~-~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg 311 (431)
T cd07104 234 AFLHQGQICMAAGRILVH-ESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGG 311 (431)
T ss_pred HHhcCCCCcccCcEEEEc-HHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 12222 2233333332 3343 666666666554441 0 0011111
Q ss_pred --------------------h-c---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhhcccccccc
Q 013679 301 --------------------L-G---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESIIENAGSVF 348 (438)
Q Consensus 301 --------------------l-~---~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l~~i~nAGaiF 348 (438)
+ . .| .++-++|.|||++++|.. |..| .|.++|+. .+..+++ +|.|+
T Consensus 312 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~i~t~d~~~~~~~~~~l~-~g~v~ 389 (431)
T cd07104 312 TYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDT-EYGLSAAVFTRDLERAMAFAERLE-TGMVH 389 (431)
T ss_pred CCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhcC-cCeEE
Confidence 1 1 12 345579999999999985 4444 77788864 4556665 99999
Q ss_pred cCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeE
Q 013679 349 LGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 391 (438)
+..++.. ..+.+|-+| ..|+.|..++..|++..++
T Consensus 390 iN~~~~~--------~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~ 429 (431)
T cd07104 390 INDQTVN--------DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWI 429 (431)
T ss_pred ECCCCCC--------CCCCCCCCCcccccCCccchHHHHHHhhceeEE
Confidence 9976521 123456655 4566666677777776554
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=96.44 E-value=1.6 Score=46.32 Aligned_cols=260 Identities=17% Similarity=0.200 Sum_probs=139.9
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
+.....++.|+.-|+++.|- -|| +++++..+||-.+|..=|+-.+|- ...... +......+|.. .++.+
T Consensus 126 ~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlKps~~---~p~~~~~l~~~l~~aGlP~gvv~~v~ 199 (478)
T cd07131 126 NKDAMTRRQPIGVVALITPW---NFPVAIPSWKIFPALVCGNTVVFKPAED---TPACALKLVELFAEAGLPPGVVNVVH 199 (478)
T ss_pred CceEEEEeeceeEEEEECCc---CcHHHHHHHHHHHHHHcCCEEEEECCCc---CcHHHHHHHHHHHhcCcCCCcEEEEe
Confidence 33456788999999999993 466 455568899999998755543331 112222 23344555543 12211
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccC
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 259 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE 259 (438)
| |.+.-.+|. .-|+||+|+==|..-+-.+ |..-.. .-.+-.- +.|-+ -+|-|++||.+..+-.++.-+=
T Consensus 200 g~~~~~~~~L~----~~~~vd~V~ftGs~~~g~~i~~~aa~~-~~~~~le-lgG~~--p~iV~~dADl~~Aa~~i~~~~~ 271 (478)
T cd07131 200 GRGEEVGEALV----EHPDVDVVSFTGSTEVGERIGETCARP-NKRVALE-MGGKN--PIIVMDDADLDLALEGALWSAF 271 (478)
T ss_pred cCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhc-CCcEEEE-CCCCC--eEEECCCCCHHHHHHHHHHHHH
Confidence 3 332223332 3578999877776543211 111100 0012222 22555 4555567999987777653211
Q ss_pred c----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC----------
Q 013679 260 H----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH---------- 303 (438)
Q Consensus 260 H----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~---------- 303 (438)
. .-.+...|+. .++.. ++..+.+.++++.+. . .+.+..+...
T Consensus 272 ~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 349 (478)
T cd07131 272 GTTGQRCTATSRLIV-HESVY-DEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGER 349 (478)
T ss_pred hcCCCCCCCCeEEEE-ehhhH-HHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 1 1223333333 33343 666666655555431 0 0111111100
Q ss_pred --------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccc
Q 013679 304 --------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENA 344 (438)
Q Consensus 304 --------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nA 344 (438)
| .++-++|+|||++++|..--=| ..|.++|.. .+++++ .+
T Consensus 350 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l-~~ 428 (478)
T cd07131 350 LTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDL-EA 428 (478)
T ss_pred cccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc-Cc
Confidence 1 3445889999999999864333 577788864 467777 59
Q ss_pred cccccCCCCcccccccccCCCCCCCCCCc-----c-ccccCcccccccceeeEE
Q 013679 345 GSVFLGEWTPESVGDYASGTNHVLPTYGY-----A-RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 345 GaiFlG~~sp~a~GDY~aGpNHvLPT~G~-----A-R~~sgLsv~~FlK~~s~~ 392 (438)
|.|+++..+.. .+--+|-+|. . |..|..++..|++..++.
T Consensus 429 G~v~iN~~~~~--------~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07131 429 GITYVNAPTIG--------AEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVY 474 (478)
T ss_pred cEEEECCCCCC--------CCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEE
Confidence 99999976531 1112576654 4 333445667788766653
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.98 Score=47.87 Aligned_cols=257 Identities=15% Similarity=0.157 Sum_probs=134.9
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
|...-.++.|+.-|++..|. -||- +.+...+||-.||..-|+-.+|- . ...+. +..+.+.+|.. .++.+
T Consensus 132 ~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~i~~AL~aGN~vilKps~~--~-~~~~~~l~~~l~~aglp~~~~~vv~ 205 (473)
T cd07082 132 GKIAQVRREPLGVVLAIGPF---NYPLNLTVSKLIPALIMGNTVVFKPATQ--G-VLLGIPLAEAFHDAGFPKGVVNVVT 205 (473)
T ss_pred CceeEEEEecceEEEEECCc---CcHHHHHHHHHHHHHHcCCEEEEECCCC--C-cHHHHHHHHHHHHcCCCccceEEEe
Confidence 54556788999999999995 3554 34456789999998765543332 1 12222 23344555552 33332
Q ss_pred c-hHHHHHHHhhcCCCCCCceEE--ecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-
Q 013679 183 G-GAQAISAMAWGTESCPKVEKI--FGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA- 258 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkI--vGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA- 258 (438)
| |...-.+|. .-|.+|+| +|.=..--.-++..-.. .+.+.+ |.---+| .+++||.+.+|-.++.-+
T Consensus 206 g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~i~~~a~~~---~~~lel--gg~n~~i-V~~dadl~~aa~~i~~~~~ 275 (473)
T cd07082 206 GRGREIGDPLV----THGRIDVISFTGSTEVGNRLKKQHPMK---RLVLEL--GGKDPAI-VLPDADLELAAKEIVKGAL 275 (473)
T ss_pred cCcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHhCCC---cEEEEc--CCCCeEE-ECCCCCHHHHHHHHHHHHH
Confidence 2 222222232 24789998 45321111111111011 133333 3333334 445688887665554332
Q ss_pred ---CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------H-------HHHHHh-------------
Q 013679 259 ---EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------G-------EFASKA------------- 300 (438)
Q Consensus 259 ---EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------~-------~ia~~s------------- 300 (438)
-..-.+...++. .++.. +++.+.+.+.++.+. . . +.++.+
T Consensus 276 ~~~GQ~C~a~~~v~v-~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~ 353 (473)
T cd07082 276 SYSGQRCTAIKRVLV-HESVA-DELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR 353 (473)
T ss_pred HhCCCcCCCCeEEEE-cHHHH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc
Confidence 222223333333 23343 666666665555442 0 0 011111
Q ss_pred --------------------h--c-CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChHH---HHhhcccccccccC
Q 013679 301 --------------------L--G-HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAEK---WESIIENAGSVFLG 350 (438)
Q Consensus 301 --------------------l--~-~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~~---~l~~i~nAGaiFlG 350 (438)
+ + .| .++.++|++|+++++|..-= --..+.+.|+.. ++.++ .+|.|+++
T Consensus 354 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l-~~G~v~iN 432 (473)
T cd07082 354 EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADAL-EVGTVNIN 432 (473)
T ss_pred CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhC-CcceEEEC
Confidence 1 1 12 34558999999999998411 125777888854 67777 79999999
Q ss_pred CCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeE
Q 013679 351 EWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 351 ~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 391 (438)
.++.. ....+|-+| ..|+.+.-+++.|.+..++
T Consensus 433 ~~~~~--------~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i 470 (473)
T cd07082 433 SKCQR--------GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGI 470 (473)
T ss_pred CCCCC--------CCCCCCCCcccccccCCCChHHHHHHhhceeEE
Confidence 75422 112356554 4555555566677766554
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.55 Score=49.55 Aligned_cols=335 Identities=13% Similarity=0.119 Sum_probs=171.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~~ 102 (438)
...+-.+..+.+.+.++++.|+=..-.++...+.. ..+..+ ..+. ...+-+++++++++++...+.. ..+.
T Consensus 18 ~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~-----~~ea~~--~ev~-~~i~~~~~~~~~~~~~~~~~~~~~~~~ 89 (434)
T cd07133 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRS-----RHETLL--AEIL-PSIAGIKHARKHLKKWMKPSRRHVGLL 89 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----hHHHHH--HHHH-HHHHHHHHHHHHHHHHhCCcccCCccc
Confidence 33444556677777777777765555555444310 000000 0111 3556667777777766544432 1221
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH-HHHHc---CCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAKKA---GVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-AA~l~---Gv~ 177 (438)
. ++...-.++.|+.-|++..|. -|| ...+...+||-.+|..=|+- |+. ........++ ..+.+ |+=
T Consensus 90 ~---~~~~~~~~~~P~Gvv~~I~pw---N~P~~~~~~~~~~ALaaGN~vvlK--ps~-~~p~~~~~l~~l~~~alP~g~~ 160 (434)
T cd07133 90 F---LPAKAEVEYQPLGVVGIIVPW---NYPLYLALGPLIAALAAGNRVMIK--PSE-FTPRTSALLAELLAEYFDEDEV 160 (434)
T ss_pred c---CCCceEEEEecccEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEE--CCC-cChHHHHHHHHHHHHhCCcCeE
Confidence 1 122344688999999999995 467 45666778999999875544 432 1111222221 22222 222
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 256 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~-~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa 256 (438)
.+. .||...-.+|. . ++||+|.==|..-+-..-. .....--.+-.. +.|-+=++| +++||.+.+|-.++.
T Consensus 161 ~~v-~g~~~~~~~l~--~---~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lE-lgGk~~~iV--~~dadl~~aa~~i~~ 231 (434)
T cd07133 161 AVV-TGGADVAAAFS--S---LPFDHLLFTGSTAVGRHVMRAAAENLTPVTLE-LGGKSPAII--APDADLAKAAERIAF 231 (434)
T ss_pred EEE-eCChHHHHHHH--h---CCCCEEEEeCchHHHHHHHHHHHhcCceEEEE-ccCCCcEEE--eCCCCHHHHHHHHHH
Confidence 222 24443223343 1 3488887777766432211 111000001111 345553333 345899988877774
Q ss_pred ccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----------------CH----HHHHHhhcC---------
Q 013679 257 QAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----------------RG----EFASKALGH--------- 303 (438)
Q Consensus 257 QAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----------------r~----~ia~~sl~~--------- 303 (438)
-+=.. -.+...++. .++.. +++.+.+.++++.+. .. +.+.++.++
T Consensus 232 ~~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~ 309 (434)
T cd07133 232 GKLLNAGQTCVAPDYVLV-PEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNP 309 (434)
T ss_pred HHhccCCCcccCCCEEEE-cHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCC
Confidence 33222 223333333 33343 555555555444321 00 111122110
Q ss_pred -------------------------------C---eEEEeCCHHHHHHHhhhhccccce--ecccChHH---HHhhcccc
Q 013679 304 -------------------------------S---FMVFARDMLEGISFSNLYAPEHLI--VNVKDAEK---WESIIENA 344 (438)
Q Consensus 304 -------------------------------g---~ii~v~~l~ea~~~~N~~APEHLe--l~~~~p~~---~l~~i~nA 344 (438)
| .|+.++|.|||++++|.. |-.|. |.++|... +..+++ +
T Consensus 310 ~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~a~~~~~~l~-~ 387 (434)
T cd07133 310 AGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINAR-PRPLALYYFGEDKAEQDRVLRRTH-S 387 (434)
T ss_pred CCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-c
Confidence 1 345588999999999975 33455 77888754 555554 7
Q ss_pred cccccCCCCcccc-cc-cccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 345 GSVFLGEWTPESV-GD-YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 345 GaiFlG~~sp~a~-GD-Y~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
|.|+++..+.... .. -+.|- -.+|..|+.|.-+++.|++..|+.
T Consensus 388 G~v~iN~~~~~~~~~~~PfGG~----k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 388 GGVTINDTLLHVAQDDLPFGGV----GASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ceEEECCcccccCCCCCCcCCC----CcccCCCcCCHHHHHHhcccceec
Confidence 9999997541110 00 11121 246777888888888888877653
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.81 Score=48.70 Aligned_cols=256 Identities=19% Similarity=0.250 Sum_probs=138.3
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhhc--
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILKA-- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~v-- 182 (438)
+|...-.++.|+.-|++..|= .+|+ .+.+...+||-.+|..=|+--+|-. ......| .+...+|.. .++.+
T Consensus 124 ~~~~~~~~~~P~GvV~~I~p~-N~P~-~~~~~~~~~ALaaGN~VilKps~~~---p~~~~~l~~~~~~aGlP~gv~~~v~ 198 (482)
T cd07119 124 PHVISRTVREPVGVCGLITPW-NYPL-LQAAWKLAPALAAGNTVVIKPSEVT---PLTTIALFELIEEAGLPAGVVNLVT 198 (482)
T ss_pred CCceEEEEEeeeeeEEEEcCC-chHH-HHHHHHHHHHHhcCCEEEEECCccc---cHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 455566889999999999995 2333 3445668899999987554433311 1122222 233445543 22221
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
| |.+.-.+|. .-|++|+|+==|..-| ++|+++- .|-..+= |-+=+ || +++||.+..+..++
T Consensus 199 g~~~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~~-----~~~lElG-Gkn~~-iV-~~dADl~~Aa~~i~ 266 (482)
T cd07119 199 GSGATVGAELA----ESPDVDLVSFTGGTATGRSIMRAAAGNVK-----KVALELG-GKNPN-IV-FADADFETAVDQAL 266 (482)
T ss_pred cCcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhcCC-----cEEEECC-CCCce-EE-CCCCCHHHHHHHHH
Confidence 3 332222222 2478999984444322 2222210 0212211 33322 33 34689888777765
Q ss_pred hcc-Cc---CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C---HH----HHHHh---------
Q 013679 256 SQA-EH---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R---GE----FASKA--------- 300 (438)
Q Consensus 256 aQA-EH---d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r---~~----ia~~s--------- 300 (438)
.=+ .+ .-.+...++. .+++. ++..+.+.+.+..+. + .+ .+..+
T Consensus 267 ~~~~~~~GQ~C~a~~~v~V-~~~i~-d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~ 344 (482)
T cd07119 267 NGVFFNAGQVCSAGSRLLV-EESIH-DKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVC 344 (482)
T ss_pred HHHHhcCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 211 11 1122223333 33343 665555555554431 0 01 11111
Q ss_pred ------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHh
Q 013679 301 ------------------------------L--G-HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWES 339 (438)
Q Consensus 301 ------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l~ 339 (438)
+ + .| .++.++|+|||++++|.. |-.| .|.++|.. .+..
T Consensus 345 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~-~~gL~~~v~t~d~~~~~~~~~ 423 (482)
T cd07119 345 GGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDT-PYGLAGAVWTKDIARANRVAR 423 (482)
T ss_pred CCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHH
Confidence 1 1 12 245579999999999987 4444 67788764 4666
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+++ +|.|++..+.+ .+.-+|- +|..|+.|..+++.|++..++.
T Consensus 424 ~l~-~G~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 471 (482)
T cd07119 424 RLR-AGTVWINDYHP---------YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHIN 471 (482)
T ss_pred hcC-cceEEECCCCC---------CCCCCCcCCcccCcCCccchHHHHHHHhceEEEE
Confidence 676 89999997432 1233574 5678888888899999876654
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=2.2 Score=45.41 Aligned_cols=251 Identities=16% Similarity=0.226 Sum_probs=139.9
Q ss_pred EEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc----hhhhcc
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT----HILKAG 183 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~----eIy~vG 183 (438)
..-.++.|+.-|++..| .-||- +.++..+||-.||..=|+-.+|-.+ .... +......+|+. .+.. |
T Consensus 119 ~~~~~~~P~GvV~~I~P---wN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp---~~~~~l~~~~~~aGlP~gv~~~v~-g 191 (462)
T PRK13968 119 QAVIEYRPLGTILAIMP---WNFPLWQVMRGAVPILLAGNGYLLKHAPNVM---GCAQLIAQVFKDAGIPQGVYGWLN-A 191 (462)
T ss_pred eEEEEEeccceEEEEcC---CchHHHHHHHHHHHHHHcCCEEEEECCCcCh---HHHHHHHHHHHHcCcCcCcEEEEe-c
Confidence 34456799999999999 45664 4455788999999875554333211 1112 22344556553 1221 2
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhc
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 257 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~------yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ 257 (438)
...-+..|. .-|+||+|.==|.. ...+|+++. .|-..+ .|.+=+ |-|++||.+..|-.++..
T Consensus 192 ~~~~~~~l~----~~~~v~~V~fTGs~~~G~~i~~~aa~~l~-----~~~lEl-GGk~p~--iV~~dAdl~~aa~~i~~~ 259 (462)
T PRK13968 192 DNDGVSQMI----NDSRIAAVTVTGSVRAGAAIGAQAGAALK-----KCVLEL-GGSDPF--IVLNDADLELAVKAAVAG 259 (462)
T ss_pred CchhhHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcCC-----cEEEec-CCCCce--EECCCCCHHHHHHHHHHH
Confidence 112233332 45789999766662 222222211 022222 355433 444568999988887743
Q ss_pred cCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC---------------CHH-------HHHHh-----------
Q 013679 258 AEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------RGE-------FASKA----------- 300 (438)
Q Consensus 258 AEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r~~-------ia~~s----------- 300 (438)
+=... .+...++. .++.. +++.+.+.+.++.+- +.. .+..+
T Consensus 260 ~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg 337 (462)
T PRK13968 260 RYQNTGQVCAAAKRFII-EEGIA-SAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGG 337 (462)
T ss_pred HHhccCCCCcCCcEEEE-CHhHH-HHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 33222 23333444 33453 666666666655441 000 00111
Q ss_pred ------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccccc
Q 013679 301 ------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAG 345 (438)
Q Consensus 301 ------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAG 345 (438)
+. .| .++.++|.|||++++|.- +-. ..|.++|.. .+.++++ +|
T Consensus 338 ~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~-~~gLs~~v~t~d~~~a~~~~~~l~-~G 415 (462)
T PRK13968 338 EKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDS-EFGLSATIFTTDETQARQMAARLE-CG 415 (462)
T ss_pred CcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCC-CCcceEEEEcCCHHHHHHHHHhCC-cc
Confidence 11 12 345589999999999964 333 477788864 4666675 89
Q ss_pred ccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 346 SVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 346 aiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.|++..++. .+.-+|-+ |..|+.|.-+++.|.+.-++.
T Consensus 416 ~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~ 458 (462)
T PRK13968 416 GVFINGYCA---------SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVW 458 (462)
T ss_pred eEEECCCCC---------CCCCCCCCCccccccCcCchHHHHHHhcceeEEE
Confidence 999997531 12234665 456777777788888866653
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.17 E-value=1.9 Score=45.95 Aligned_cols=258 Identities=20% Similarity=0.204 Sum_probs=141.6
Q ss_pred eEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCch-hhh-c-c
Q 013679 109 VRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVTH-ILK-A-G 183 (438)
Q Consensus 109 v~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~e-Iy~-v-G 183 (438)
...-.++.|+.-|++..|- -||-. .+..++||-.+|..=|+ -|+. .-...... ......+|..+ ++. + |
T Consensus 131 ~~~~~~~~P~Gvv~~I~p~---N~Pl~~~~~~~~~ALaaGN~vvl--KPs~-~tp~t~~~l~~l~~~aglP~g~~~~v~g 204 (481)
T TIGR03216 131 ALNYAVRKPLGVVGVISPW---NLPLLLMTWKVGPALACGNTVVV--KPSE-ETPGTATLLGEVMNAVGVPKGVYNVVHG 204 (481)
T ss_pred ceeEEEEeccceEEEECCC---CcHHHHHHHHHHHHHHcCCEEEE--ECCc-cchHHHHHHHHHHHHcCCCcCceEEEec
Confidence 3444667999999999983 56644 45568899999976544 3542 11122222 23445565542 111 2 2
Q ss_pred -hHHHHHH-HhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-C
Q 013679 184 -GAQAISA-MAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-E 259 (438)
Q Consensus 184 -GAQAIAA-lAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA-E 259 (438)
|...+.. |. .-|+||+|.==|...+-.+ .+..+...-.|-.. +-|.+= +|-|++||.+.++-.++.-+ .
T Consensus 205 ~~~~~~~~~l~----~~~~vd~v~fTGS~~~G~~i~~~aa~~~~~~~lE-lgG~n~--~iV~~dadl~~aa~~i~~~~f~ 277 (481)
T TIGR03216 205 FGPDSAGEFLT----RHPGVDAITFTGETRTGSAIMKAAADGVKPVSFE-LGGKNA--AIVFADCDFDAAVAGILRSAFL 277 (481)
T ss_pred CChhHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhcCCCeEEEE-CCCCCe--EEECCCCCHHHHHHHHHHHHHh
Confidence 3322222 32 3478999984444433211 01111000012222 235553 44455689998887776443 3
Q ss_pred cC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC-----------
Q 013679 260 HG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH----------- 303 (438)
Q Consensus 260 Hd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~----------- 303 (438)
+. -.+...++.. ++.. +++.+.+.+.++.+. . .+.++++...
T Consensus 278 ~~GQ~C~a~~rv~V~-~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~ 355 (481)
T TIGR03216 278 NTGQVCLGTERVYVE-RPIF-DRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVP 355 (481)
T ss_pred cCCCCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcc
Confidence 32 2233334433 3343 666666666555441 0 2222322111
Q ss_pred --------------------------------C---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhhccc
Q 013679 304 --------------------------------S---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESIIEN 343 (438)
Q Consensus 304 --------------------------------g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l~~i~n 343 (438)
| .|+-++|.|||++++|.. +-+| .|.++|+. .+..+++
T Consensus 356 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l~- 433 (481)
T TIGR03216 356 DFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDT-PYGLAASVWTEDLSRAHRVARQME- 433 (481)
T ss_pred cccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCC-CccceEEEECCCHHHHHHHHHhcC-
Confidence 1 345589999999999976 4454 67788874 5666764
Q ss_pred ccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 344 AGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 344 AGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+|.|++...... | ++ +|- +|..|+.|.-++..|++.-++.
T Consensus 434 ~G~v~iN~~~~~---~----~~--~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 478 (481)
T TIGR03216 434 VGIVWVNSWFLR---D----LR--TPFGGSKLSGIGREGGVHSLEFYTELTNVC 478 (481)
T ss_pred ccEEEECCCCCC---C----CC--CCcCCcccCcCCcCchHHHHHHhhceEEEE
Confidence 999999965421 1 12 354 4567777777888888876653
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=96.16 E-value=2.2 Score=45.14 Aligned_cols=331 Identities=17% Similarity=0.159 Sum_probs=177.2
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+++-+.++++.++=..-.++...+...+. . ..| ++ ...+-++.++++++++.....+...
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~--~~e-----v~-~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (443)
T cd07132 17 RPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEA-V--LSE-----IL-LVKNEIKYAISNLPEWMKPEPVKKN- 86 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-H--HHH-----HH-HHHHHHHHHHHHHHHHhCCccCCCc-
Confidence 334444566777888888888876666666665421110 0 001 11 3455677888888877643332211
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH-HHHHc---CCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAKKA---GVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-AA~l~---Gv~ 177 (438)
... .+-..-.++.|+.-|+++.|- -|| ...+...+||-.+|+.=|+- |+. ........|+ ..+.+ |+=
T Consensus 87 ~~~-~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlK--ps~-~~~~~~~~l~~~~~~~lp~gv~ 159 (443)
T cd07132 87 LAT-LLDDVYIYKEPLGVVLIIGAW---NYPLQLTLVPLVGAIAAGNCVVIK--PSE-VSPATAKLLAELIPKYLDKECY 159 (443)
T ss_pred ccc-CCCceEEEEecccEEEEEcCC---chhHHHHHHHHHHHHHcCCEEEEE--CCc-cCHHHHHHHHHHHHHhCCcCeE
Confidence 111 111233456899999999995 578 45666788999988875544 432 1111112222 11211 333
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH-----H-HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHH
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV-----T-AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 251 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV-----~-~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vA 251 (438)
.+..-++. ....|. + +.||+|.==|..=+ . +++.+. . |-.. +.|.+= +|-|++||.+..|
T Consensus 160 ~vv~g~~~-~~~~l~--~---~~vd~V~fTGs~~~g~~i~~~a~~~~~-~----~~lE-lgG~~p--~iV~~dADl~~aa 225 (443)
T cd07132 160 PVVLGGVE-ETTELL--K---QRFDYIFYTGSTSVGKIVMQAAAKHLT-P----VTLE-LGGKSP--CYVDKSCDIDVAA 225 (443)
T ss_pred EEEeCCHH-HHHHHH--h---CCCCEEEEECChHHHHHHHHHHHhhCC-c----eEEE-cCCCCc--eEEcCCCCHHHHH
Confidence 34433333 344443 1 46887754444332 1 222211 1 2222 245553 4445669999988
Q ss_pred Hhhhhcc-CcCC---CCc-eEEEecCchhhHHHHHHHHHHHHhcC----CC-------------HHHHH-----------
Q 013679 252 ADLLSQA-EHGP---DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL----PR-------------GEFAS----------- 298 (438)
Q Consensus 252 aDLLaQA-EHd~---~a~-~vLvt~s~~la~~~V~~ei~~ql~~l----~r-------------~~ia~----------- 298 (438)
..++.=+ -+.- .+. -++| .++.. +++.+.+.++++.+ |+ .+-+.
T Consensus 226 ~~i~~~~f~~~GQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~g 302 (443)
T cd07132 226 RRIAWGKFINAGQTCIAPDYVLC--TPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIG 302 (443)
T ss_pred HHHHHHHHhcCCCceeCCcEEEE--cHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeC
Confidence 7776322 1211 122 2444 44453 77666666655443 11 00000
Q ss_pred ----------------------Hhhc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccc
Q 013679 299 ----------------------KALG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGS 346 (438)
Q Consensus 299 ----------------------~sl~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGa 346 (438)
.-+. .| .++.++|+|||++++|..--=| ..|.++|... +.++++ +|.
T Consensus 303 g~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~-~G~ 381 (443)
T cd07132 303 GQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTS-SGG 381 (443)
T ss_pred CccCCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCC-cce
Confidence 0111 12 3455789999999999843323 5677888754 666775 799
Q ss_pred cccCCCCcccc-cc-cccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 347 VFLGEWTPESV-GD-YASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 347 iFlG~~sp~a~-GD-Y~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
|++..++-... +. -+.|-- -+|..|+.|..++++|++..++.
T Consensus 382 v~IN~~~~~~~~~~~PfGG~k----~SG~G~~~g~~~l~~~~~~k~v~ 425 (443)
T cd07132 382 VCVNDTIMHYTLDSLPFGGVG----NSGMGAYHGKYSFDTFSHKRSCL 425 (443)
T ss_pred EEECCcccccCCCCCCCCCCC----cccCCCcccHHHHHHhccccEEE
Confidence 99997541111 11 122332 36788888888999999876664
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=96.15 E-value=2.2 Score=44.86 Aligned_cols=326 Identities=17% Similarity=0.126 Sum_probs=167.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc--CCCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK--SAET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~--~~~~ 101 (438)
...+-.+.++.+.+.++++.|+=..-.++...+. +. +...-+..+++.++.|.+.-. ....
T Consensus 20 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~----~~-------------~~~~ei~~~~~~l~~~~~~~~~~~~~~ 82 (432)
T cd07105 20 PPSERRDILLKAADLLESRRDEFIEAMMEETGAT----AA-------------WAGFNVDLAAGMLREAASLITQIIGGS 82 (432)
T ss_pred CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCC----HH-------------HHHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 3344455566666667766665444444433221 00 112234556666665544221 1111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-h
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-H 178 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-e 178 (438)
.....+|...-.++.|+.-|++..| .-||-. .+...+||-.+|..=|+- |+. ....... +..+...+|.. .
T Consensus 83 ~~~~~~~~~~~~~~~P~GVV~~I~p---~N~P~~~~~~~~~~ALaaGN~VVlK--ps~-~~p~~~~~l~~~~~~aGlP~g 156 (432)
T cd07105 83 IPSDKPGTLAMVVKEPVGVVLGIAP---WNAPVILGTRAIAYPLAAGNTVVLK--ASE-LSPRTHWLIGRVFHEAGLPKG 156 (432)
T ss_pred cccCCCCceeEEEEecceEEEEECC---cCcHHHHHHHHHHHHHhcCCEEEEE--CCc-cChHHHHHHHHHHHHcCcCCC
Confidence 1111234445567799999999988 456644 455778999999875544 432 1112222 33455667764 3
Q ss_pred hhhc--c----hHHHHHHHhhcCCCCCCceEEecCCcHHHH--HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 179 ILKA--G----GAQAISAMAWGTESCPKVEKIFGPGNQYVT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 179 Iy~v--G----GAQAIAAlAyGTetIp~VDkIvGPGN~yV~--~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
++.+ | |.+...+|. +-|.||+|.==|..=+- .+|..-..- -.| +=-+.|-+ -+|-|++||.+..
T Consensus 157 v~~~v~g~~~~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~-~~~-~lElgGk~--p~iV~~dadl~~a 228 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALI----AHPAVRKVNFTGSTRVGRIIAETAAKHL-KPV-LLELGGKA--PAIVLEDADLDAA 228 (432)
T ss_pred cEEEEeCCCCchHHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcC-CeE-EEeCCCCC--ceEECCCCCHHHH
Confidence 3332 2 222223333 24778987554544331 111110000 001 00122333 3555677999988
Q ss_pred HHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC-------------C----HHHHHHh---------
Q 013679 251 AADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-------------R----GEFASKA--------- 300 (438)
Q Consensus 251 AaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-------------r----~~ia~~s--------- 300 (438)
|-+++.-+ =....+...++... +.. ++..+.+.+++..+. . .+.+..+
T Consensus 229 a~~i~~~~~~~~GQ~C~a~~~v~V~~-~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~ 306 (432)
T cd07105 229 ANAALFGAFLNSGQICMSTERIIVHE-SIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVV 306 (432)
T ss_pred HHHHHHHHHhcCCCCCcCCceEEEcH-HHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 87776432 22233434444433 232 555555555544321 0 0111111
Q ss_pred ---------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhccc
Q 013679 301 ---------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIEN 343 (438)
Q Consensus 301 ---------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~n 343 (438)
+. .| .++.++|.|||++++|.--.=| ..|.++|+.. +..++ +
T Consensus 307 gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l-~ 385 (432)
T cd07105 307 GGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRI-E 385 (432)
T ss_pred CCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-C
Confidence 00 11 3455889999999999763222 5677888753 55555 6
Q ss_pred ccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeE
Q 013679 344 AGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 344 AGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~ 391 (438)
+|.+|++.++.. .+..+| .+|..|+.|..+++.|.+..++
T Consensus 386 ~g~v~vN~~~~~--------~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v 430 (432)
T cd07105 386 SGAVHINGMTVH--------DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430 (432)
T ss_pred cCeEEECCCCCC--------CCCCCCCCCcccccccccChHHHHHHhhceEEE
Confidence 999999975521 112245 4556777777777888877665
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.85 Score=48.18 Aligned_cols=254 Identities=19% Similarity=0.193 Sum_probs=137.9
Q ss_pred EEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc----hhhhcc
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT----HILKAG 183 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~----eIy~vG 183 (438)
..-.++.|+.-|++..|= -|| +..+...+||-.+|..=|+- |+. .-...... ......+|.. .+..-.
T Consensus 111 ~~~~~~~P~GvV~~I~p~---N~P~~~~~~~~~~ALaaGN~vvlK--ps~-~~p~~~~~l~~~~~~aglP~gv~~~v~g~ 184 (454)
T cd07101 111 RTTVNRRPKGVVGVISPW---NYPLTLAVSDAIPALLAGNAVVLK--PDS-QTALTALWAVELLIEAGLPRDLWQVVTGP 184 (454)
T ss_pred eEEEEEEeccEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCc-cchHHHHHHHHHHHHcCcCCCcEEEEeCC
Confidence 445788999999999993 566 55667888999999875543 432 11122222 2333445432 222112
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhc
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 257 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ 257 (438)
|.....+|.= .+|+|.==|..-+ ++|+++.. |... +-|-+ -+|-|++||.+.++..++.=
T Consensus 185 ~~~~~~~l~~------~~~~V~fTGs~~~g~~i~~~aa~~~~~-----~~lE-lgG~~--p~iV~~dAdl~~a~~~i~~~ 250 (454)
T cd07101 185 GSEVGGAIVD------NADYVMFTGSTATGRVVAERAGRRLIG-----CSLE-LGGKN--PMIVLEDADLDKAAAGAVRA 250 (454)
T ss_pred cHHHHHHHHh------CCCEEEEECCHHHHHHHHHHHHhcCCc-----EEEE-CCCCc--eEEECCCCCHHHHHHHHHHH
Confidence 4444444442 1455554444333 22222210 1111 23433 24445668998877666533
Q ss_pred cCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC--------
Q 013679 258 AEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH-------- 303 (438)
Q Consensus 258 AEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~-------- 303 (438)
+=.. -.+...|+. .++.. ++..+.+.++++.+.- .+.+.++..+
T Consensus 251 ~~~~sGQ~C~a~~rv~V-~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg 328 (454)
T cd07101 251 CFSNAGQLCVSIERIYV-HESVY-DEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGG 328 (454)
T ss_pred HHhcCCCCcccCeEEEE-cHHHH-HHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 2211 123333333 44453 7777767666655420 0111122110
Q ss_pred -------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhcccc
Q 013679 304 -------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENA 344 (438)
Q Consensus 304 -------------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nA 344 (438)
| .++.++|+|||++++|.. |-- ..|.++|.. .+..++ ++
T Consensus 329 ~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~a~~~~~~l-~~ 406 (454)
T cd07101 329 RARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDT-DYGLNASVWTRDGARGRRIAARL-RA 406 (454)
T ss_pred CCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhc-Cc
Confidence 1 345588999999999975 433 567788865 466666 48
Q ss_pred cccccCCCCcccccc---cccCCCCCCCCCCccccccCcccccccceeeE
Q 013679 345 GSVFLGEWTPESVGD---YASGTNHVLPTYGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 345 GaiFlG~~sp~a~GD---Y~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 391 (438)
|.|++........++ .+.|-. .+|..|+.|.-+++.|.+..++
T Consensus 407 G~v~iN~~~~~~~~~~~~PfgG~k----~SG~G~~~g~~~~~~~~~~k~v 452 (454)
T cd07101 407 GTVNVNEGYAAAWASIDAPMGGMK----DSGLGRRHGAEGLLKYTETQTV 452 (454)
T ss_pred ceEEECCCCCcCcCCCCCCCCccc----ccccCccchHHHHHHhcceEEE
Confidence 999999755432222 122221 3566888887888888876654
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.96 E-value=2.7 Score=44.36 Aligned_cols=253 Identities=18% Similarity=0.167 Sum_probs=138.4
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--c-h
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--G-G 184 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v--G-G 184 (438)
..-.++.|+.-|+++.|= .+|+ ++.++..+||-.+|..=|+-.+|-. ..... +....+.+|+. .++.+ | |
T Consensus 116 ~~~~~~~P~GVv~~I~p~-N~P~-~~~~~~~~~ALaaGN~VV~Kps~~~---p~~~~~l~~~~~~ag~p~g~~~~v~g~~ 190 (456)
T cd07145 116 IAFTVREPIGVVGAITPF-NFPA-NLFAHKIAPAIAVGNSVVVKPSSNT---PLTAIELAKILEEAGLPPGVINVVTGYG 190 (456)
T ss_pred eeEEEEecceeEEEECCC-ChHH-HHHHHHHHHHHHcCCEEEEECCccc---hHHHHHHHHHHHHcCCCcccEEEEeCCC
Confidence 344667899999999996 3333 3334677899999987554443321 12222 23344555654 33332 3 3
Q ss_pred HHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh--
Q 013679 185 AQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS-- 256 (438)
Q Consensus 185 AQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa-- 256 (438)
.+.-.+|. .-|.+|+|+==|..=+ .+|+.+ . .|-.. +.|-+= +|-|++||.+.+|-.++.
T Consensus 191 ~~~~~~l~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~--~---~v~lE-lgG~n~--~iV~~dAdl~~aa~~i~~~~ 258 (456)
T cd07145 191 SEVGDEIV----TNPKVNMISFTGSTAVGLLIASKAGGTG--K---KVALE-LGGSDP--MIVLKDADLERAVSIAVRGR 258 (456)
T ss_pred chHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcC--C---ceEEe-cCCCCe--eEECCCCCHHHHHHHHHHHH
Confidence 33222332 2478998854444432 223211 1 02222 234443 344456899988877763
Q ss_pred --ccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------------------H----HHHHHh------------
Q 013679 257 --QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------------------G----EFASKA------------ 300 (438)
Q Consensus 257 --QAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------------------~----~ia~~s------------ 300 (438)
.+=+...+...++. .++.. +++.+.+.++++.+.- . +.+.++
T Consensus 259 f~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~ 336 (456)
T cd07145 259 FENAGQVCNAVKRILV-EEEVY-DKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK 336 (456)
T ss_pred HhccCCCCccCeeEEE-cHHHH-HHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 11112223333333 33453 6677666666655420 0 011111
Q ss_pred ---------------------hc---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChHH---HHhhcccccccc
Q 013679 301 ---------------------LG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAEK---WESIIENAGSVF 348 (438)
Q Consensus 301 ---------------------l~---~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~~---~l~~i~nAGaiF 348 (438)
+. .| .++.++|+|||++++|.. +-.| .|.++|... +..++ .+|.|+
T Consensus 337 ~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~~-~~g~v~ 414 (456)
T cd07145 337 RDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANST-EYGLQASVFTNDINRALKVAREL-EAGGVV 414 (456)
T ss_pred CCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhC-CcceEE
Confidence 11 12 345589999999999985 4444 677888754 44444 689999
Q ss_pred cCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 349 LGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
+...+.... .-+|- +|..|+.|..++..|++..++
T Consensus 415 vN~~~~~~~--------~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v 454 (456)
T cd07145 415 INDSTRFRW--------DNLPFGGFKKSGIGREGVRYTMLEMTEEKTI 454 (456)
T ss_pred ECCCCCCCC--------CCCCCCCcccccCCcCchHHHHHHhhceeEE
Confidence 997653211 12454 456788888888888886665
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.6 Score=49.27 Aligned_cols=255 Identities=24% Similarity=0.311 Sum_probs=138.8
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCc-hhhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVT-HILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~-eIy~v- 182 (438)
+|...-.++.|+.-|++..|= -||-.. +..++||-.+|..=|+- |+... .... .+......+|.. .++.+
T Consensus 110 ~~~~~~~~~~P~GVV~~I~p~---N~P~~~~~~~~~~ALaaGN~VV~K--ps~~~-p~~~~~l~~~~~~aGlP~gvv~~v 183 (456)
T cd07110 110 EDFKARVRREPVGVVGLITPW---NFPLLMAAWKVAPALAAGCTVVLK--PSELT-SLTELELAEIAAEAGLPPGVLNVV 183 (456)
T ss_pred CCceeEEEEecceeEEEECCC---ChHHHHHHHHHHHHHHcCCEEEEE--Ccccc-hHHHHHHHHHHHHcCCCCCcEEEE
Confidence 355556789999999999994 477544 44788999999864444 43211 1111 222344556654 33322
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~------yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |...-.+|. .-|.||+|+==|.. ..++|+.+. . |-..+ -|-+ -+|-|++||.+.++.++
T Consensus 184 ~g~~~~~~~~L~----~~~~v~~V~fTGs~~~g~~v~~~aa~~~~-~----~~lEl-gG~~--~~iV~~dadl~~aa~~i 251 (456)
T cd07110 184 TGTGDEAGAPLA----AHPGIDKISFTGSTATGSQVMQAAAQDIK-P----VSLEL-GGKS--PIIVFDDADLEKAVEWA 251 (456)
T ss_pred ecCchHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcCC-e----EEEEc-CCCC--eeEECCCCCHHHHHHHH
Confidence 3 333223333 34778887655552 223332211 0 22221 2433 34445668999888777
Q ss_pred hhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------------------------------------
Q 013679 255 LSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-------------------------------------- 292 (438)
Q Consensus 255 LaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-------------------------------------- 292 (438)
+.- +=..-.+...++.. ++.. ++..+.+.+.++.+.
T Consensus 252 ~~~~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~ 329 (456)
T cd07110 252 MFGCFWNNGQICSATSRLLVH-ESIA-DAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLL 329 (456)
T ss_pred HHHHHhcCCCCCCCCceEEEc-HHHH-HHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 533 22223333344443 2332 555554444443320
Q ss_pred ----C------HHHHH-----------Hhhc---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhh
Q 013679 293 ----R------GEFAS-----------KALG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESI 340 (438)
Q Consensus 293 ----r------~~ia~-----------~sl~---~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l~~ 340 (438)
+ .-... .-+. .| .++.++|.|||++++|.. +--| .|.+.|.. .+..+
T Consensus 330 ~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~ 408 (456)
T cd07110 330 CGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDS-EYGLAAAVISRDAERCDRVAEA 408 (456)
T ss_pred eCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHh
Confidence 0 00000 0111 12 345589999999999985 4444 67788874 35556
Q ss_pred cccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 341 IENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 341 i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++ +|.+++...+. . +.-+|- +|..|+.|..++..|.+..++.
T Consensus 409 l~-~G~v~iN~~~~---~------~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 409 LE-AGIVWINCSQP---C------FPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CC-cceEEECCCCC---C------CCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 64 99999997432 1 122454 4567777878888888776653
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=95.83 E-value=2.3 Score=44.71 Aligned_cols=332 Identities=17% Similarity=0.170 Sum_probs=164.8
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+++.+.++++-|+=..-.+..-.+...+ ....| + ....+-++.+++.+++++.........
T Consensus 17 ~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~---~~~~E-----v-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (426)
T cd07087 17 RSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAE---AYLTE-----I-AVVLGEIDHALKHLKKWMKPRRVSVPL 87 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH---HHHHH-----H-HHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 33344445566777777777665433333332221000 00000 1 122334555555555554322111111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCC----c
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV----T 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv----~ 177 (438)
..++...-.++.|+.-|++..|. -||- +++...+||-.+|..=|+- |+. .-...+..++.+-..|+ =
T Consensus 88 --~~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aL~aGN~vvlK--ps~-~~p~~~~~l~~~~~~~~P~gv~ 159 (426)
T cd07087 88 --LLQPAKAYVIPEPLGVVLIIGPW---NYPLQLALAPLIGAIAAGNTVVLK--PSE-LAPATSALLAKLIPKYFDPEAV 159 (426)
T ss_pred --ccCCCceEEEEecCcEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEE--CCc-cCHHHHHHHHHHHHHhCCCCEE
Confidence 11233445678999999999995 3554 5566788999999876554 432 11122233332222123 2
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh-
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL- 255 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL- 255 (438)
.+.. |+.+...+|.= . | ||+|+=-|..-+..+ .+.....-..+-.. +.|-+= +|-|++||.+.++-.++
T Consensus 160 ~vv~-g~~~~~~~l~~---~-~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~le-lgG~~~--~iV~~dadl~~aa~~i~~ 230 (426)
T cd07087 160 AVVE-GGVEVATALLA---E-P-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLE-LGGKSP--CIVDKDANLEVAARRIAW 230 (426)
T ss_pred EEEe-CCchHHHHHHh---C-C-CCEEEEeCChHHHHHHHHHHHhhCCceEEe-ccCCCc--eEecCCCCHHHHHHHHHH
Confidence 2332 44444333321 1 5 999887777654322 11111000002122 235543 34455688888776655
Q ss_pred ---hccCcCCCCc-eEEEecCchhhHHHHHHHHHHHHhcCC--------------C---HHHHHHh--------------
Q 013679 256 ---SQAEHGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP--------------R---GEFASKA-------------- 300 (438)
Q Consensus 256 ---aQAEHd~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~--------------r---~~ia~~s-------------- 300 (438)
.-+=+.-.+. -++|-. +.. ++..+.+.+.++.+. . .+-+.+-
T Consensus 231 ~~~~~~GQ~C~a~~rv~V~~--~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~~~ 307 (426)
T cd07087 231 GKFLNAGQTCIAPDYVLVHE--SIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVDK 307 (426)
T ss_pred HHHhccCCccccCCEEEEcH--HHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCccCC
Confidence 1222223333 344432 232 444444444443220 0 0000000
Q ss_pred -------------------h--c-CC---eEEEeCCHHHHHHHhhhhccccce--ecccChHH---HHhhcccccccccC
Q 013679 301 -------------------L--G-HS---FMVFARDMLEGISFSNLYAPEHLI--VNVKDAEK---WESIIENAGSVFLG 350 (438)
Q Consensus 301 -------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEHLe--l~~~~p~~---~l~~i~nAGaiFlG 350 (438)
+ + .| .++.++|++||++++|.. +..|. |.++|+.. +..+++ +|.||+.
T Consensus 308 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l~-~g~v~iN 385 (426)
T cd07087 308 EERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSR-PKPLALYLFSEDKAVQERVLAETS-SGGVCVN 385 (426)
T ss_pred CCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHhcCC-cccEEEC
Confidence 1 1 13 456689999999999984 55565 77888853 455554 8999999
Q ss_pred CCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 351 EWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 351 ~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
...-. ..++.+|- +|..|..|.-+++.|++..++.
T Consensus 386 ~~~~~-------~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 386 DVLLH-------AAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred Ccccc-------cCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 75311 12334454 4567777777888888876653
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=95.73 E-value=3.3 Score=43.56 Aligned_cols=280 Identities=18% Similarity=0.176 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHh--ccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCC
Q 013679 82 FDVAYNNIYAFHLA--QKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 82 i~~A~~nI~~fh~~--q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
+..++++++.|... .+.........+|.....++.|+.-|+++.|= -||-.. +-.++||-.+|..=| .-|+.
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~---N~P~~~~~~~~~~AL~aGN~VI--lKps~ 155 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPW---NYPLMMAAWKIAPALAAGNTVV--LKPSE 155 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCC---CcHHHHHHHHHHHHHHcCCEEE--EECCc
Confidence 45566666655432 12211111112344455678999999999995 356443 556789999998433 34442
Q ss_pred CCCCCCHHHHHHHHHcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH----HH-HHHHhcCCCCccccc
Q 013679 159 QDGSICKEVLYCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV----TA-AKMILQNSEAMISID 229 (438)
Q Consensus 159 ~~G~i~p~iL~AA~l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV----~~-AK~~v~~~~~~VgID 229 (438)
........|+-+-.-|+. .++.+ | |...-..| -.-|.+|+|+==|..-+ .. |.+.+. .+-..
T Consensus 156 -~~~~~~~~l~~~~~~glP~g~~~~v~g~~~~~~~~l----~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~----~~~le 226 (450)
T cd07092 156 -TTPLTTLLLAELAAEVLPPGVVNVVCGGGASAGDAL----VAHPRVRMVSLTGSVRTGKKVARAAADTLK----RVHLE 226 (450)
T ss_pred -cchHHHHHHHHHHHhcCCcccEEEeecCchHHHHHH----hcCCCCCEEEEECcHHHHHHHHHHHhhcCC----cEEEE
Confidence 111222233222212442 12111 2 22222222 12478998874443322 11 111111 12222
Q ss_pred CCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC-------------
Q 013679 230 MPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP------------- 292 (438)
Q Consensus 230 ~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~------------- 292 (438)
+.|-+= +|-|++||.+..|-+++.-+=+ ...+...++. .++.. +++.+.+.++++.+.
T Consensus 227 -lgG~~p--~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V-~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp 301 (450)
T cd07092 227 -LGGKAP--VIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYV-HESVY-DEFVAALVEAVSAIRVGDPDDEDTEMGP 301 (450)
T ss_pred -CCCCCe--eEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEE-eHHHH-HHHHHHHHHHHhhCCcCCCCCCCCccCc
Confidence 233332 4556789999888777653322 2223333444 33353 666666666665441
Q ss_pred --C---HHHH----HHhh------------------------------------c-CC---eEEEeCCHHHHHHHhhhhc
Q 013679 293 --R---GEFA----SKAL------------------------------------G-HS---FMVFARDMLEGISFSNLYA 323 (438)
Q Consensus 293 --r---~~ia----~~sl------------------------------------~-~g---~ii~v~~l~ea~~~~N~~A 323 (438)
+ .+-+ .++. + .| .++-++|+|||++++|..
T Consensus 302 li~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~- 380 (450)
T cd07092 302 LNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDV- 380 (450)
T ss_pred ccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCC-
Confidence 0 1111 1110 0 01 234478999999999986
Q ss_pred ccc--ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 324 PEH--LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 324 PEH--Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
+-. ..|.++|.. .+++++ ++|.|++..+++. +..+|-+ |..|+.+.-+++.|.+..++
T Consensus 381 ~~gL~~~vft~d~~~~~~~~~~l-~~g~v~iN~~~~~---------~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~ 448 (450)
T cd07092 381 EYGLASSVWTRDVGRAMRLSARL-DFGTVWVNTHIPL---------AAEMPHGGFKQSGYGKDLSIYALEDYTRIKHV 448 (450)
T ss_pred CCCceEEEECCCHHHHHHHHHhc-CccEEEECCCCCC---------CCCCCcCCcccCcCCCCChHHHHHHHheeeEE
Confidence 444 456677764 456666 5999999976531 2236665 45556666666777765554
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.73 E-value=2.9 Score=45.02 Aligned_cols=250 Identities=21% Similarity=0.240 Sum_probs=137.7
Q ss_pred EEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--c-hHH
Q 013679 113 RVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--G-GAQ 186 (438)
Q Consensus 113 ~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v--G-GAQ 186 (438)
.++.|+.-|+++.|= -|| ...++..+||-.||..=|+-.+|-. ..... +......+|.. .++.+ | |..
T Consensus 156 ~~~~P~GvV~~I~Pw---N~P~~~~~~~i~~ALaaGN~VVlKps~~t---p~~~~~l~~~l~eaglP~gvv~~v~g~~~~ 229 (498)
T PLN02278 156 VLKQPVGVVGAITPW---NFPLAMITRKVGPALAAGCTVVVKPSELT---PLTALAAAELALQAGIPPGVLNVVMGDAPE 229 (498)
T ss_pred EEeecccEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEECCCCC---hHHHHHHHHHHHHcCCCcccEEEEecCChh
Confidence 456899999999995 577 4555688899999987555433321 11111 22334455553 33322 3 333
Q ss_pred HHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCc
Q 013679 187 AISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 260 (438)
Q Consensus 187 AIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH 260 (438)
.-.+|. +-|+||+|+==|..-+ .+|+.+ . .|-.-+ -|-+=+ |-|++||.+.+|-.++.-+=+
T Consensus 230 ~~~~L~----~~~~v~~V~fTGS~~~G~~i~~~aa~~~-~----~~~lEl-GGk~~~--iV~~dAdl~~aa~~i~~~~f~ 297 (498)
T PLN02278 230 IGDALL----ASPKVRKITFTGSTAVGKKLMAGAAATV-K----RVSLEL-GGNAPF--IVFDDADLDVAVKGALASKFR 297 (498)
T ss_pred hHHHHh----cCCCcCEEEEECcHHHHHHHHHHHhhcC-C----cEEEec-CCCCee--EECCCCCHHHHHHHHHHHHhc
Confidence 223332 2478998766565432 223211 1 122222 344433 445679999988877643333
Q ss_pred CC----CCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC-----------
Q 013679 261 GP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH----------- 303 (438)
Q Consensus 261 d~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~----------- 303 (438)
.. .+...++.. ++.. ++..+.+.+.++.+. . .+.+..+++.
T Consensus 298 ~~GQ~C~a~~rv~V~-~~i~-~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~ 375 (498)
T PLN02278 298 NSGQTCVCANRILVQ-EGIY-DKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRH 375 (498)
T ss_pred cCCCCCcCCcEEEEe-HHHH-HHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccC
Confidence 22 222233332 3343 555555555554441 0 1112222110
Q ss_pred ---------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhcccccccc
Q 013679 304 ---------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGSVF 348 (438)
Q Consensus 304 ---------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAGaiF 348 (438)
| .|+-++|+|||++++|.- |-. ..|.++|.. .+..++ ++|.|+
T Consensus 376 ~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~-~~gL~a~vft~d~~~~~~~~~~l-~~G~v~ 453 (498)
T PLN02278 376 SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDT-EAGLAAYIFTRDLQRAWRVSEAL-EYGIVG 453 (498)
T ss_pred CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhC-CcCeEE
Confidence 1 233478999999999975 333 456677775 455666 469999
Q ss_pred cCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 349 LGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+..... ++ ..+|- +|..|+.|.-+++.|++.-++..
T Consensus 454 iN~~~~---~~------~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~ 494 (498)
T PLN02278 454 VNEGLI---ST------EVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCL 494 (498)
T ss_pred ECCCCC---CC------CCCCcCCcccCcCCccchHHHHHHhheeEEEEE
Confidence 997432 22 12454 56678888788888988777653
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=95.70 E-value=3.7 Score=43.86 Aligned_cols=254 Identities=19% Similarity=0.209 Sum_probs=138.1
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
|...-.+++|+.-|++..|= -||- +.+...+||-.+|..=|+- |+. ....... +......+|.. .++.+
T Consensus 135 ~~~~~~~~~P~GvV~~I~p~---N~P~~~~~~~~~~ALaaGN~VV~K--ps~-~~p~~~~~l~~~~~~aglP~gv~~~v~ 208 (484)
T cd07144 135 NKLAYTLHEPYGVCGQIIPW---NYPLAMAAWKLAPALAAGNTVVIK--PAE-NTPLSLLYFANLVKEAGFPPGVVNIIP 208 (484)
T ss_pred CceEEEEEecceEEEEECcC---CCHHHHHHHHHHHHHHcCCEEEEE--CCc-cchHHHHHHHHHHHHhCcCCCcEEEEe
Confidence 44455778999999999994 3554 4566678999999875554 432 1111222 22334445543 33332
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
| |...-.+|. .-|.||+|+==|..=+- +++.+. .+-..+ -|-+ -+|-|++||.+..|-.++
T Consensus 209 g~~~~~~~~L~----~~~~vd~V~fTGS~~~g~~i~~~a~~~~~-----~~~lEl-GGk~--p~iV~~dADl~~Aa~~i~ 276 (484)
T cd07144 209 GYGAVAGSALA----EHPDVDKIAFTGSTATGRLVMKAAAQNLK-----AVTLEC-GGKS--PALVFEDADLDQAVKWAA 276 (484)
T ss_pred cCCchHHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhcCC-----eEEEEc-CCCC--eEEECCCCCHHHHHHHHH
Confidence 2 333222232 24788888766665532 222110 022222 1333 344456789888777665
Q ss_pred hccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhc-C----CC--------------H----HHHHHhhc------
Q 013679 256 SQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQS-L----PR--------------G----EFASKALG------ 302 (438)
Q Consensus 256 aQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~-l----~r--------------~----~ia~~sl~------ 302 (438)
.-+=.+. .+...++. .++.. ++..+.+.++++. + |. . +.+.++..
T Consensus 277 ~~~f~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~ 354 (484)
T cd07144 277 AGIMYNSGQNCTATSRIYV-QESIY-DKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLV 354 (484)
T ss_pred HHHHhcCCCCCCCCceEEE-cHHHH-HHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 4443333 22222333 33343 6666655555542 1 10 0 01111110
Q ss_pred -----------C------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHh
Q 013679 303 -----------H------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWES 339 (438)
Q Consensus 303 -----------~------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~ 339 (438)
. | .++.++|++||++++|.. +-- ..|.++|+. .++.
T Consensus 355 ~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gLsa~i~t~d~~~a~~~~~ 433 (484)
T cd07144 355 YGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDT-TYGLAAAVFTKDIRRAHRVAR 433 (484)
T ss_pred eCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHH
Confidence 0 1 234467899999999985 333 578888875 4566
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++ ++|.||+...+. . +.-+|-+ |..|+.|.-+++.|.+..++.
T Consensus 434 ~l-~~G~v~iN~~~~---~------~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 481 (484)
T cd07144 434 EL-EAGMVWINSSND---S------DVGVPFGGFKMSGIGRELGEYGLETYTQTKAVH 481 (484)
T ss_pred hc-CcCEEEECCCCC---C------CCCCCcCCcccCcCCCCchHHHHHHhhceEEEE
Confidence 66 489999996421 1 1125665 556777777788888877764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=95.67 E-value=3.7 Score=43.78 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=56.8
Q ss_pred EEEeCCHHHHHHHhhhhcc---cc--ceecccChHH---HHhhcccccccccCCCCcccccccccCCC-----CCCCCCC
Q 013679 306 MVFARDMLEGISFSNLYAP---EH--LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTN-----HVLPTYG 372 (438)
Q Consensus 306 ii~v~~l~ea~~~~N~~AP---EH--Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpN-----HvLPT~G 372 (438)
++-++|.|||++++|...+ =. ..|.++|... +..++ .+|.|++...+ .+|---.|.| -+|-++.
T Consensus 336 v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l-~aG~V~IN~~~--~~~~~g~~~~~~~~~~~~~~~~ 412 (436)
T cd07122 336 FYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRM-PVSRILVNTPS--SLGGIGDTYNGLAPSLTLGCGS 412 (436)
T ss_pred EEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhC-CceEEEEeCCc--cccccCccCCCCCceeeeeccc
Confidence 4558999999999999632 22 5778888754 44455 59999999644 3444444444 4555555
Q ss_pred cccccc--CcccccccceeeEE
Q 013679 373 YARMYG--GVSLDSFLKYMTVQ 392 (438)
Q Consensus 373 ~AR~~s--gLsv~~FlK~~s~~ 392 (438)
+-+-+. +|+..+||+..++-
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~ 434 (436)
T cd07122 413 WGGNSTSDNVGPKHLLNIKRVA 434 (436)
T ss_pred cCCCcCCCCCChHHhheeEeec
Confidence 554443 48999999988763
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=95.67 E-value=1.1 Score=46.94 Aligned_cols=334 Identities=12% Similarity=0.137 Sum_probs=170.1
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+.++.+.+.++++-|+-..-.++.+.+.. + .-.++..++ .+.. ...-++.++++++.|.+.-... ...
T Consensus 18 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~-e-~G~~~a~~~--~l~~-~~~ev~~~~~~~~~~a~~~~~~g~~~ 92 (406)
T cd07079 18 STEQKNAALLAIADALEANRDEILEANAKDLAAAR-E-AGLSEALLD--RLLL-TPERIEAMAEGLRQVAALPDPVGEVL 92 (406)
T ss_pred CHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHH-H-cCCCHHHHh--HhcC-CHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 33444566777777777777765554444332211 0 001100000 0111 1123666677777765321111 000
Q ss_pred --EEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH-----HHHHcC
Q 013679 103 --VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-----CAKKAG 175 (438)
Q Consensus 103 --~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-----AA~l~G 175 (438)
.....|...-.++.|+.-|++..| . +|...++.++||-.||+.=|+= |+. .-......++ +.+.+|
T Consensus 93 ~~~~~~~~~~~~~~~~PlGVV~~I~p---~-~p~~~~~~~~~ALaaGN~vVlK--ps~-~tp~~~~~l~~~~~~~l~~aG 165 (406)
T cd07079 93 RGWTLPNGLQIEKVRVPLGVIGIIYE---S-RPNVTVDAAALCLKSGNAVILR--GGS-EALHSNRALVEIIQEALEEAG 165 (406)
T ss_pred cceeccCccceeEEecceEEEEEecC---C-CcchHHHHHHHHHHhCCEEEEe--CCc-hhhhHHHHHHHHHHHHHHHcC
Confidence 011223334467899999999999 2 4667778899999999875543 431 1112222222 112455
Q ss_pred Cc-hhhh-c-c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 176 VT-HILK-A-G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 176 v~-eIy~-v-G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
.. .++. + | |...++.+- .+=|.||+|.==|+.=|-. +++. .. .| +=-+-|-+=+ |-|++||.+.
T Consensus 166 ~P~gvv~~v~g~~~~~~~~~l---~~~~~v~~i~fTGS~~~G~~i~~~a-~~---pv-~lELGGk~p~--IV~~dADl~~ 235 (406)
T cd07079 166 LPEDAVQLIPDTDREAVQELL---KLDDYIDLIIPRGGAGLIRFVVENA-TI---PV-IKHGDGNCHV--YVDESADLEM 235 (406)
T ss_pred CCcccEEEecCCChHHHHHHH---cCCCCccEEEeCCCHHHHHHHHHhc-CC---CE-EeecCCcceE--EEeCCCCHHH
Confidence 44 2222 1 3 333444321 1246799987666542211 1111 10 01 1113354444 3355699999
Q ss_pred HHHhhhhccCcCCCCce----EEEecCchhhHHHHHHHHHHHHhcCC-------C-HHHHHH-------hhc---CC---
Q 013679 250 IAADLLSQAEHGPDSQV----VLVIVGDGVDLDAIEQEISKQCQSLP-------R-GEFASK-------ALG---HS--- 304 (438)
Q Consensus 250 vAaDLLaQAEHd~~a~~----vLvt~s~~la~~~V~~ei~~ql~~l~-------r-~~ia~~-------sl~---~g--- 304 (438)
.|..++-=+=.... .| .++. .++.. +++.+.+.+.++.+. + ..+... -+. .|
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V-~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl 312 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLV-HRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLIL 312 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEE-eHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCcee
Confidence 88887655432222 22 1222 33343 666666655554442 1 111111 111 13
Q ss_pred eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCC---------
Q 013679 305 FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY--------- 371 (438)
Q Consensus 305 ~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~--------- 371 (438)
.|+-++|+|||++++|.---=| ..|.++|... +..++ ++|.|++...+.... | +|-+
T Consensus 313 ~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~-~~G~v~iN~~~~~~~--------~-~pfg~~~~sG~~~ 382 (406)
T cd07079 313 AVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREV-DSAAVYVNASTRFTD--------G-GEFGLGAEIGIST 382 (406)
T ss_pred EEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhC-CeeEEEEeCCCcccC--------C-Cccccceeeeeec
Confidence 4566899999999999753333 6788888765 44444 599999996442211 1 1222
Q ss_pred CccccccCcccccccceeeEE
Q 013679 372 GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 372 G~AR~~sgLsv~~FlK~~s~~ 392 (438)
|..|..|..+++.|++.-++.
T Consensus 383 ~~g~~~g~~~l~~~~~~k~i~ 403 (406)
T cd07079 383 QKLHARGPMGLEELTTYKYIV 403 (406)
T ss_pred CCCcCCCCcChHHhcEEEEEE
Confidence 225777788888888766654
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=95.67 E-value=3.5 Score=43.42 Aligned_cols=283 Identities=18% Similarity=0.148 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQ 159 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~ 159 (438)
-+..++++++.|.+..++..+.. ..+|.....+++|+.-|++..| .-||- ..+...+||-.+|+.=|+- |+.
T Consensus 79 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p---~N~P~~~~~~~~~~ALaaGN~VilK--ps~- 151 (446)
T cd07106 79 EVGGAVAWLRYTASLDLPDEVIE-DDDTRRVELRRKPLGVVAAIVP---WNFPLLLAAWKIAPALLAGNTVVLK--PSP- 151 (446)
T ss_pred HHHHHHHHHHHHHhhhhcCcccc-CCCCceEEEEEEcceEEEEEcC---CChHHHHHHHHHHHHHHcCCEEEEE--CCc-
Confidence 45667777777765443333222 2235456678899999999999 34553 4455678999999875543 432
Q ss_pred CCCCCHHHHHHHH-Hc---CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCCCCC
Q 013679 160 DGSICKEVLYCAK-KA---GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMPAGP 234 (438)
Q Consensus 160 ~G~i~p~iL~AA~-l~---Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~AGP 234 (438)
........|+-+- .+ |+=.+.. |+...-.+|. +-|.+|+|.==|..-|-.. .+.....-..+-+.+ -|.
T Consensus 152 ~~p~~~~~l~~~~~~~lP~g~~~~v~-g~~~~~~~l~----~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lEl-GG~ 225 (446)
T cd07106 152 FTPLCTLKLGELAQEVLPPGVLNVVS-GGDELGPALT----SHPDIRKISFTGSTATGKKVMASAAKTLKRVTLEL-GGN 225 (446)
T ss_pred cchHHHHHHHHHHHHhCCcCeEEEee-CChhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEec-CCC
Confidence 1112222222221 11 2223332 4433222332 3477898876666544221 111110000133344 344
Q ss_pred ceEEEEecCCCCHHHHHHhhhhccCcCC----CCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------
Q 013679 235 SEVLVIADIYASPVHIAADLLSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR---------------- 293 (438)
Q Consensus 235 SEvlIiAD~~Anp~~vAaDLLaQAEHd~----~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r---------------- 293 (438)
+= +|-|++||.+..|-.++.-+=+.. .+. -++| .++.. ++..+.+.+.++.+.-
T Consensus 226 ~p--~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V--~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 300 (446)
T cd07106 226 DA--AIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYV--HESIY-DEFCEALVALAKAAVVGDGLDPGTTLGPVQNK 300 (446)
T ss_pred Ce--eEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEE--ccccH-HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCH
Confidence 42 344456899998888876444322 222 3444 33343 6666666666554420
Q ss_pred --H----HHHHHhhc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cc
Q 013679 294 --G----EFASKALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PE 325 (438)
Q Consensus 294 --~----~ia~~sl~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PE 325 (438)
. +.+..+.. .| .|+-++|+|||++++|..- +=
T Consensus 301 ~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL 380 (446)
T cd07106 301 MQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGL 380 (446)
T ss_pred HHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCc
Confidence 0 11111110 01 2344799999999999842 22
Q ss_pred cceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 326 HLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 326 HLel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
-..|.++|.. .+..++ ++|.|++..++.. + --+|- +|..|+.|.-+++.|++..++
T Consensus 381 ~~~i~t~d~~~~~~~~~~~-~~G~v~iN~~~~~---~------~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v 444 (446)
T cd07106 381 GASVWSSDLERAEAVARRL-EAGTVWINTHGAL---D------PDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444 (446)
T ss_pred eEEEECCCHHHHHHHHHhC-CccEEEECCCCCC---C------CCCCCCCccccccCccchHHHHHHhhceeEE
Confidence 3678888874 455666 4899999975411 1 11344 456677776777778776554
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.65 E-value=3.7 Score=43.58 Aligned_cols=254 Identities=19% Similarity=0.247 Sum_probs=144.1
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHH-HHHHHcCCc-hhhhc
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVL-YCAKKAGVT-HILKA 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL-~AA~l~Gv~-eIy~v 182 (438)
+|.....++.|+.-|++..|- -|| ++.+...+||-.+|..=|+-.+|-.+ ... .++ .++..+|+. .++.+
T Consensus 120 ~~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p---~~~~~~l~~~l~~aG~P~gvv~~ 193 (465)
T cd07151 120 PGKENRVYREPLGVVGVISPW---NFPLHLSMRSVAPALALGNAVVLKPASDTP---ITGGLLLAKIFEEAGLPKGVLNV 193 (465)
T ss_pred CCceeEEEEecceEEEEECCC---ChHHHHHHHHHHHHHHcCCEEEEECCCCCc---HhHHHHHHHHHHHcCcCccceEE
Confidence 455566789999999999994 466 44456788999999876655444211 121 122 356677764 34433
Q ss_pred --c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 183 --G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 183 --G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
| |...-.+|. +-|.||+|.==|..=|- +|+.+ .. |-..+ -|-+= +|-|++||.+.++-.
T Consensus 194 v~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~-~~----~~lEl-GGk~p--~iV~~daDl~~Aa~~ 261 (465)
T cd07151 194 VVGAGSEIGDAFV----EHPVPRLISFTGSTPVGRHIGELAGRHL-KK----VALEL-GGNNP--FVVLEDADIDAAVNA 261 (465)
T ss_pred EecCchhhHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcC-Cc----EEEEC-CCCCe--EEECCCCCHHHHHHH
Confidence 3 333222232 12778887766665332 22211 11 22222 24443 344566899988877
Q ss_pred hhhcc-CcCC---CCc-eEEEecCchhhHHHHHHHHHHHHhcC----C-----------CH-------HHHHHhhc----
Q 013679 254 LLSQA-EHGP---DSQ-VVLVIVGDGVDLDAIEQEISKQCQSL----P-----------RG-------EFASKALG---- 302 (438)
Q Consensus 254 LLaQA-EHd~---~a~-~vLvt~s~~la~~~V~~ei~~ql~~l----~-----------r~-------~ia~~sl~---- 302 (438)
++.-+ -+.- .+. -++| .++.. +++.+.+.+.++.+ | ++ +.++++..
T Consensus 262 i~~~~f~~~GQ~C~a~~rv~V--~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~ 338 (465)
T cd07151 262 AVFGKFLHQGQICMAINRIIV--HEDVY-DEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGAT 338 (465)
T ss_pred HHHHHHhcCCCCCcCCcEEEE--eHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCE
Confidence 66544 2221 222 2444 33343 66666665555444 1 00 11111110
Q ss_pred -------------------------------CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccc
Q 013679 303 -------------------------------HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIEN 343 (438)
Q Consensus 303 -------------------------------~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~n 343 (438)
.| .++.++|.|||++++|.. +-. ..|.++|.. .+..++ .
T Consensus 339 vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~a~v~t~d~~~a~~~~~~l-~ 416 (465)
T cd07151 339 LLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDT-EYGLSGAVFTSDLERGVQFARRI-D 416 (465)
T ss_pred EEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCC-CccceEEEECCCHHHHHHHHHhC-C
Confidence 11 345588999999999986 333 578888875 356666 6
Q ss_pred ccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 344 AGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 344 AGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
+|.|++..++. ++ ...+|-+ |..|+.|..+++.|.+.-++
T Consensus 417 ~G~v~iN~~~~---~~-----~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~ 461 (465)
T cd07151 417 AGMTHINDQPV---ND-----EPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461 (465)
T ss_pred cCeEEECCCCC---CC-----CCCCCCCCcccccCCcCChHHHHHHhhceEEE
Confidence 89999997652 11 1235655 56777777788888876665
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=95.43 E-value=4.4 Score=42.96 Aligned_cols=328 Identities=20% Similarity=0.194 Sum_probs=165.1
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+-+.++++-|+-..-.+....+.. .-+. . ..+ ....+-++..++.++++...+.+..-
T Consensus 24 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~e~~--~--~ev-~~~~~~~~~~a~~~~~~~~~~~~~~~- 93 (436)
T cd07135 24 KDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPP----FETL--L--TEV-SGVKNDILHMLKNLKKWAKDEKVKDG- 93 (436)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHh--H--HHH-HHHHHHHHHHHHHHHHhhCCcccCCc-
Confidence 334444566777777777787766555565554321 1000 0 001 12233344555555544322222110
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCC----c
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV----T 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv----~ 177 (438)
....++...--++.|+.-|++..|- -||- ..+...+||-.+|..=|+- |+. .......+|...-.-|+ =
T Consensus 94 ~~~~~~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~Vi~K--ps~-~~p~~~~~l~~l~~~~lP~g~v 167 (436)
T cd07135 94 PLAFMFGKPRIRKEPLGVVLIIGPW---NYPVLLALSPLVGAIAAGCTVVLK--PSE-LTPHTAALLAELVPKYLDPDAF 167 (436)
T ss_pred ccccCCCceEEEeccCcEEEEECCC---cchHHHHHHHHHHHHHcCCEEEEE--CCc-cChHHHHHHHHHHHHhCCcCEE
Confidence 0001122233478999999999994 4784 5566777999999875544 432 22222223322211122 2
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHH
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 251 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vA 251 (438)
.+.. |+...+.+|. .=| ||+|.=-|..=+ ++|+.+. . +-.. +.|-+ -+|-|++||.+..|
T Consensus 168 ~vv~-g~~~~~~~l~----~~~-vd~v~ftGs~~~g~~i~~~aa~~~~-~----~~le-lgG~~--~~iV~~dADl~~aa 233 (436)
T cd07135 168 QVVQ-GGVPETTALL----EQK-FDKIFYTGSGRVGRIIAEAAAKHLT-P----VTLE-LGGKS--PVIVTKNADLELAA 233 (436)
T ss_pred EEEc-CCchhHHHHH----hCC-CCEEEEECCcHHHHHHHHHHHhcCC-C----eEEE-ccCCC--cEEECCCCCHHHHH
Confidence 2332 4333455543 124 888765555432 2222211 0 1111 22433 34445569999887
Q ss_pred Hhhhhcc-CcC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC--------------C---HHHHHHhhc--------
Q 013679 252 ADLLSQA-EHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------R---GEFASKALG-------- 302 (438)
Q Consensus 252 aDLLaQA-EHd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------------r---~~ia~~sl~-------- 302 (438)
..++.=+ .+. -.+...++. .++.. ++..+.+.+.++.+. + .+-+.+-++
T Consensus 234 ~~i~~~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~v~~ 311 (436)
T cd07135 234 KRILWGKFGNAGQICVAPDYVLV-DPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGKVVI 311 (436)
T ss_pred HHHHHHHhccCCceecCCCEEec-cHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCeEEE
Confidence 7665322 221 122223333 34453 666666666665441 1 111111111
Q ss_pred ------------------------------CC---eEEEeCCHHHHHHHhhhhccccce--ecccChH---HHHhhcccc
Q 013679 303 ------------------------------HS---FMVFARDMLEGISFSNLYAPEHLI--VNVKDAE---KWESIIENA 344 (438)
Q Consensus 303 ------------------------------~g---~ii~v~~l~ea~~~~N~~APEHLe--l~~~~p~---~~l~~i~nA 344 (438)
.| .++.++|+|||++++|.. +-.|. |.++|+. .+..++ .+
T Consensus 312 gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~-~~gL~~~v~t~d~~~a~~~~~~l-~~ 389 (436)
T cd07135 312 GGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSR-DTPLALYIFTDDKSEIDHILTRT-RS 389 (436)
T ss_pred CCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHhcC-Cc
Confidence 01 345589999999999975 33454 7788886 455566 47
Q ss_pred cccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 345 GSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 345 GaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
|.||++..+. .. .+..+|- +|..|..|..+++.|++.-++
T Consensus 390 g~v~iN~~~~-~~------~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i 434 (436)
T cd07135 390 GGVVINDTLI-HV------GVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTV 434 (436)
T ss_pred CeEEECCccc-cc------cCCCCCcCCcCcccCCccccHhHHHHhcccccc
Confidence 9999996421 11 1222344 456677666677777765544
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=4.5 Score=43.00 Aligned_cols=255 Identities=17% Similarity=0.173 Sum_probs=134.3
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHHHH-HHHHcCCchhhhc--c
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAKKAGVTHILKA--G 183 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-AA~l~Gv~eIy~v--G 183 (438)
|.....++.|+.-|++..|= -||-.. +...+||-.+|..=|+- |+. ........|+ ..+.+==..++.+ |
T Consensus 129 ~~~~~~~r~P~GVv~~I~p~---N~P~~~~~~~i~~ALaaGN~VIlK--ps~-~~p~~~~~l~~~~~~alP~gv~~~v~g 202 (475)
T PRK13473 129 GHTSMIRRDPVGVVASIAPW---NYPLMMAAWKLAPALAAGNTVVLK--PSE-ITPLTALKLAELAADILPPGVLNVVTG 202 (475)
T ss_pred CceeEEEEecceeEEEEccC---ChHHHHHHHHHHHHHhcCCEEEEE--CCC-CChHHHHHHHHHHHHhCCcCcEEEEec
Confidence 44455678999999999884 466554 44677999999875543 432 1111122111 1111101122211 2
Q ss_pred -hHHHHHHHhhcCCCCCCceEEe--cCCc---HHHH-HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh-
Q 013679 184 -GAQAISAMAWGTESCPKVEKIF--GPGN---QYVT-AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL- 255 (438)
Q Consensus 184 -GAQAIAAlAyGTetIp~VDkIv--GPGN---~yV~-~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL- 255 (438)
|...-.+|. +-|.||+|. |-=. .-.. +|+.+- . +...+ .|-+ -+|-|++||.+.+|-.++
T Consensus 203 ~~~~~~~~l~----~~~~vd~V~fTGs~~~g~~i~~~aa~~~~-~----~~lEl-gG~~--p~iV~~dADld~Aa~~i~~ 270 (475)
T PRK13473 203 RGATVGDALV----GHPKVRMVSLTGSIATGKHVLSAAADSVK-R----THLEL-GGKA--PVIVFDDADLDAVVEGIRT 270 (475)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCC-c----EEEEC-CCCC--eeEECCCCCHHHHHHHHHH
Confidence 333333332 247899887 5322 1111 222111 0 22222 2333 244566799998777774
Q ss_pred ---hccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhc--------
Q 013679 256 ---SQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALG-------- 302 (438)
Q Consensus 256 ---aQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~-------- 302 (438)
.-+=+.-.+...++. .++.. ++..+.+.+.++.+. + .+.+..+.+
T Consensus 271 ~~f~n~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~ 348 (475)
T PRK13473 271 FGYYNAGQDCTAACRIYA-QRGIY-DDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVT 348 (475)
T ss_pred HHHhcCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 222223334344444 33343 666666665555442 0 011111111
Q ss_pred -------CC---------------------------eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhhcccc
Q 013679 303 -------HS---------------------------FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIENA 344 (438)
Q Consensus 303 -------~g---------------------------~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~~l~~i~nA 344 (438)
.| .|+-++|.|||++++|..- +=-..|.++|.. .+..+++ +
T Consensus 349 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~-~ 427 (475)
T PRK13473 349 GGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQ-Y 427 (475)
T ss_pred CCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-c
Confidence 01 2344799999999999852 122577788864 4556666 8
Q ss_pred cccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 345 GSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 345 GaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
|.||+..+... +.-+|-+ |..|+.|..+++.|.+.-++.
T Consensus 428 G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~ 471 (475)
T PRK13473 428 GCTWVNTHFML---------VSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVM 471 (475)
T ss_pred ceEEECCCCCC---------CCCCCCCCccccccCccchHHHHHHHhceEEEE
Confidence 99999975431 1225665 556777777788888766653
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=95.36 E-value=2.5 Score=44.86 Aligned_cols=256 Identities=18% Similarity=0.186 Sum_probs=139.9
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-hhh--c
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILK--A 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e-Iy~--v 182 (438)
|...-.++.|+.-|++..|- -||-. .+...+||-.+|..=|+- |.... ..... +..+...+|..+ ++. .
T Consensus 128 ~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~i~~ALaaGN~VvlK--ps~~~-p~~~~~l~~~~~~aglP~gv~~~v~ 201 (471)
T cd07139 128 GGHVLVRREPVGVVAAIVPW---NAPLFLAALKIAPALAAGCTVVLK--PSPET-PLDAYLLAEAAEEAGLPPGVVNVVP 201 (471)
T ss_pred CceEEEEEEeccEEEEEcCC---chHHHHHHHHHHHHHhcCCEEEEE--CCCcC-CHHHHHHHHHHHHcCCCCCcEEEEe
Confidence 44455788999999999993 46633 455678999999875544 43211 12222 233555666643 332 2
Q ss_pred chHHHHHHHhhcCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCc
Q 013679 183 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 260 (438)
Q Consensus 183 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH 260 (438)
||...-..|. .-|.+|+|.=-|..-+-. +|..-.. .-.|-.. +.|-+=. || +++||.+.+|-+++.-+=+
T Consensus 202 g~~~~~~~l~----~~~~i~~v~ftGs~~~g~~v~~~~~~~-~~~~~lE-lGG~np~-iV-~~dADl~~aa~~i~~~~~~ 273 (471)
T cd07139 202 ADREVGEYLV----RHPGVDKVSFTGSTAAGRRIAAVCGER-LARVTLE-LGGKSAA-IV-LDDADLDAAVPGLVPASLM 273 (471)
T ss_pred CCHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhc-CCEEEEE-cCCCCee-EE-CCCCCHHHHHHHHHHHHHh
Confidence 5544323333 257788776666555422 1111110 0002111 2244433 33 3468999988887643322
Q ss_pred C----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhh------------
Q 013679 261 G----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKAL------------ 301 (438)
Q Consensus 261 d----~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl------------ 301 (438)
. -.+. -++|-. ++. +++.+.+.+.++.+. + .+.++++.
T Consensus 274 ~~GQ~C~a~~~v~V~~--~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 350 (471)
T cd07139 274 NNGQVCVALTRILVPR--SRY-DEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGR 350 (471)
T ss_pred cCCCCCcCCcEEEEeH--hHH-HHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 2 2232 344432 343 555555555543331 0 01111110
Q ss_pred --------------------------c--CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccc
Q 013679 302 --------------------------G--HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGS 346 (438)
Q Consensus 302 --------------------------~--~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGa 346 (438)
+ .| .++.++|+|||++++|..--=| ..|.++|+.. +..+++ +|.
T Consensus 351 ~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~-~G~ 429 (471)
T cd07139 351 PAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIR-TGT 429 (471)
T ss_pred CCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC-cce
Confidence 1 12 3455889999999999753222 5677888754 566664 999
Q ss_pred cccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
|++...+ . +..||-+ |..|+.|.-+++.|.+..++
T Consensus 430 v~iN~~~----~------~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i 469 (471)
T cd07139 430 VGVNGFR----L------DFGAPFGGFKQSGIGREGGPEGLDAYLETKSI 469 (471)
T ss_pred EEECCCC----C------CCCCCCCCcccccCCccchHHHHHHHhceeEE
Confidence 9999743 1 2236665 55777777778888877665
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=5 Score=43.24 Aligned_cols=256 Identities=19% Similarity=0.216 Sum_probs=138.5
Q ss_pred EEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhhc--c-hHH
Q 013679 113 RVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILKA--G-GAQ 186 (438)
Q Consensus 113 ~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~v--G-GAQ 186 (438)
.++.|+.-|+++.| .-|| +..++..+||-.||..=|+- |+. .-......| .....+|.. .++.+ | |..
T Consensus 154 ~~~~P~GVv~~I~p---~N~P~~~~~~~i~~ALaaGN~VIlK--Ps~-~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~ 227 (496)
T PLN00412 154 TSKIPLGVVLAIPP---FNYPVNLAVSKIAPALIAGNAVVLK--PPT-QGAVAALHMVHCFHLAGFPKGLISCVTGKGSE 227 (496)
T ss_pred EEEecceEEEEECC---CCchHHHHHHHHHHHHHcCCEEEEE--CCc-cCcHHHHHHHHHHHHhCCCcccEEEEecCchH
Confidence 56789999999999 5677 45677899999999875543 331 111222222 333445542 23322 3 333
Q ss_pred HHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcCC---
Q 013679 187 AISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHGP--- 262 (438)
Q Consensus 187 AIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~-~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd~--- 262 (438)
.-.+|. .-|.||.|.==|.. ..+++.... .-.|... +-|-+ -+|-|++||.+..|..++.-+=+..
T Consensus 228 ~~~~l~----~~~~v~~V~ftGs~---~g~~v~~~a~~~~~~lE-lGG~~--p~iV~~dADl~~Aa~~i~~~~~~~~GQ~ 297 (496)
T PLN00412 228 IGDFLT----MHPGVNCISFTGGD---TGIAISKKAGMVPLQME-LGGKD--ACIVLEDADLDLAAANIIKGGFSYSGQR 297 (496)
T ss_pred HHHHHh----cCCCcCEEEEeChH---HHHHHHHHhCCCcEEEE-cCCCc--eEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 323332 35778887655542 122221110 0001111 11333 2444667999999888876444332
Q ss_pred -CCceEEEecCchhhHHHHHHHHHHHHhcCC--------------C-------HHHHHHhhcCC----------------
Q 013679 263 -DSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------R-------GEFASKALGHS---------------- 304 (438)
Q Consensus 263 -~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------------r-------~~ia~~sl~~g---------------- 304 (438)
.+...++.. +++. +++.+.+.+.++.+. . .+.++.+...|
T Consensus 298 C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~P 375 (496)
T PLN00412 298 CTAVKVVLVM-ESVA-DALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWP 375 (496)
T ss_pred CccCeEEEEc-HHHH-HHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEec
Confidence 232333333 3353 666666665555542 0 11223332222
Q ss_pred ----------------------eEEEeCCHHHHHHHhhhhccc-cceecccChHH---HHhhcccccccccCCCCccccc
Q 013679 305 ----------------------FMVFARDMLEGISFSNLYAPE-HLIVNVKDAEK---WESIIENAGSVFLGEWTPESVG 358 (438)
Q Consensus 305 ----------------------~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~G 358 (438)
.++.++|.|||++++|..-== -..|.++|... +.+++ .+|.|++...+.....
T Consensus 376 tvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~v~vN~~~~~~~~ 454 (496)
T PLN00412 376 LLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAM-ETGTVQINSAPARGPD 454 (496)
T ss_pred EEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-CcceEEEcCCCCCCCC
Confidence 245689999999999985211 26778888754 45565 5899999975431111
Q ss_pred c-cccCCCCCCCCCCccccccCcccccccceeeE
Q 013679 359 D-YASGTNHVLPTYGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 359 D-Y~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 391 (438)
. -+.|-. .+|..|..+.-+++.|++..++
T Consensus 455 ~~PfGG~k----~SG~G~~~g~~~~~~ft~~k~i 484 (496)
T PLN00412 455 HFPFQGLK----DSGIGSQGITNSINMMTKVKST 484 (496)
T ss_pred CCCCCCcc----ccccCCCChHHHHHHhcceEEE
Confidence 1 022222 2566777777788889886554
|
|
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.36 E-value=4.6 Score=42.82 Aligned_cols=253 Identities=21% Similarity=0.219 Sum_probs=137.2
Q ss_pred EEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCch-hhh-c-c-h
Q 013679 111 CKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVTH-ILK-A-G-G 184 (438)
Q Consensus 111 ~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~e-Iy~-v-G-G 184 (438)
.-.++.|+.-|++..|- -||-.. +...+||-.+|..=|+- |+. .-...... ......+|+.+ ++. + | |
T Consensus 113 ~~~~~~P~GvV~~I~p~---N~P~~~~~~~i~~ALaaGN~Vi~K--ps~-~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~ 186 (454)
T cd07118 113 GLVLREPIGVVGIITPW---NFPFLILSQKLPFALAAGCTVVVK--PSE-FTSGTTLMLAELLIEAGLPAGVVNIVTGYG 186 (454)
T ss_pred eeEEeecceEEEEECCC---CcHHHHHHHHHHHHHhcCCEEEEE--CCC-CCcHHHHHHHHHHHhcCCCccceEEEecCC
Confidence 34567999999999993 577544 56677999999875544 432 11122222 23445566542 221 1 2 2
Q ss_pred HHHHHHHhhcCCCCCCceEE--ecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-CcC
Q 013679 185 AQAISAMAWGTESCPKVEKI--FGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-EHG 261 (438)
Q Consensus 185 AQAIAAlAyGTetIp~VDkI--vGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA-EHd 261 (438)
.+.-.+|. .-|++|+| +|.-..--..+|+.-.. ...+-.. +.|-+ -+|-+++||.+.+|-+++-=+ .|.
T Consensus 187 ~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~~~le-lgG~n--~~iV~~dAdl~~aa~~i~~~~f~~~ 258 (454)
T cd07118 187 ATVGQAMT----EHPDVDMVSFTGSTRVGKAIAAAAARN-LKKVSLE-LGGKN--PQIVFADADLDAAADAVVFGVYFNA 258 (454)
T ss_pred chHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhc-CCcEEec-cCCCC--ceEECCCCCHHHHHHHHHHHHHhcc
Confidence 22222232 34789987 55421111111111000 0012222 22444 356667899999888776433 332
Q ss_pred C---CCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc-------------
Q 013679 262 P---DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG------------- 302 (438)
Q Consensus 262 ~---~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~------------- 302 (438)
. .+. -++| .++.. ++..+.+.++++.+. . .+.+.++..
T Consensus 259 GQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 335 (454)
T cd07118 259 GECCNSGSRLLV--HESIA-DAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLA 335 (454)
T ss_pred CCCCCCCceEEE--cHHHH-HHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 2 222 3444 33353 666666666655441 0 011111110
Q ss_pred --------------------------CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhhcccccccc
Q 013679 303 --------------------------HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESIIENAGSVF 348 (438)
Q Consensus 303 --------------------------~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~nAGaiF 348 (438)
.| .++-++|+|||++++|.. +-. ..|.++|... +..++ .+|.||
T Consensus 336 ~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~~~vft~d~~~~~~~~~~l-~~g~v~ 413 (454)
T cd07118 336 SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDT-VYGLSAGVWSKDIDTALTVARRI-RAGTVW 413 (454)
T ss_pred CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCC-CccceEEEECCCHHHHHHHHHhc-CcCEEE
Confidence 01 345589999999999984 333 5677888654 56666 599999
Q ss_pred cCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeE
Q 013679 349 LGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 391 (438)
+..++. + +..+|-+| +.|+.|.-+++.|++..++
T Consensus 414 iN~~~~---~------~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~ 452 (454)
T cd07118 414 VNTFLD---G------SPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452 (454)
T ss_pred ECCCCC---C------CCCCCcCCcccccCCcCchHHHHHHHhceeEE
Confidence 997642 2 23467654 5666666667778776654
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=95.30 E-value=5.4 Score=43.22 Aligned_cols=325 Identities=14% Similarity=0.185 Sum_probs=178.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+.+.++++-|+=..-.++.+.+...+.. ..|+. ...+-|++++++++++...+.....
T Consensus 29 ~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~---~~Ev~------~~~~~~~~~~~~~~~~~~~~~~~~~- 98 (484)
T PLN02174 29 RGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESS---VYEVS------LLRNSIKLALKQLKNWMAPEKAKTS- 98 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH---HHHHH------HHHHHHHHHHHHHHHHhcccccccc-
Confidence 3444556667788888888888877777777754211100 01111 3556678888888887654432211
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH---HHHHHHHc----
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE---VLYCAKKA---- 174 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~---iL~AA~l~---- 174 (438)
... .+...-.++.|+.-|++..|- -||=. .+.-.+||-.||+.=|+= |+. ..|. +|+-+-..
T Consensus 99 ~~~-~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--Pse----~tp~~~~~l~~l~~~~lp~ 168 (484)
T PLN02174 99 LTT-FPASAEIVSEPLGVVLVISAW---NYPFLLSIDPVIGAISAGNAVVLK--PSE----LAPASSALLAKLLEQYLDS 168 (484)
T ss_pred ccc-CCcceEEEEecceEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCC----CCHHHHHHHHHHHHHhCCC
Confidence 111 122334678999999999994 46653 445688999999875554 431 3332 22211111
Q ss_pred CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 175 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 175 Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
|+=.+. .||.....+|. . |+||+|.==|..-| ++|+.+-- |. =-+-|=+=++|. ++||.+
T Consensus 169 gvv~vv-~G~~~~~~~l~----~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~-----v~-LELGGk~p~iV~--~dADl~ 234 (484)
T PLN02174 169 SAVRVV-EGAVTETTALL----E-QKWDKIFYTGSSKIGRVIMAAAAKHLTP-----VV-LELGGKSPVVVD--SDTDLK 234 (484)
T ss_pred CEEEEE-ECChHHHHHHh----c-ccCCEEEEECChHHHHHHHHHHHhcCCc-----EE-EecCCCCeEEEc--CCCCHH
Confidence 221222 25555556555 3 89999976666554 23332210 11 012333333333 458888
Q ss_pred HHHHhhhhcc-C-cCC---CCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------------HHHHHHh--
Q 013679 249 HIAADLLSQA-E-HGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------------GEFASKA-- 300 (438)
Q Consensus 249 ~vAaDLLaQA-E-Hd~---~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------------~~ia~~s-- 300 (438)
..|-.++.-+ . +.- .|...++. .+++. +++.+.+.+.++.+. . .+.++++
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ 312 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISPDYILT-TKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEV 312 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcCcEEEE-eHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHc
Confidence 8666655322 2 211 22333333 23343 555555544443331 0 0011111
Q ss_pred -------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HH
Q 013679 301 -------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WE 338 (438)
Q Consensus 301 -------------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l 338 (438)
+. .| .|+-++|.|||++++|.- |-- ..|.++|... +.
T Consensus 313 ga~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~-~~gLaa~vft~d~~~a~~~~ 391 (484)
T PLN02174 313 SDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSR-PKPLAAYLFTHNKKLKERFA 391 (484)
T ss_pred CCEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCC-CCCeEEEEEcCCHHHHHHHH
Confidence 00 01 233468999999999985 333 4667788754 66
Q ss_pred hhcccccccccCCCCcc------cccccccCCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPE------SVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~------a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++ ++|.|++..++.. ++|.+ -.+|..|+.|.-++++|.+.-++..
T Consensus 392 ~~l-~aG~v~IN~~~~~~~~~~~PfGG~--------k~SG~Gr~~G~~gl~~ft~~K~v~~ 443 (484)
T PLN02174 392 ATV-SAGGIVVNDIAVHLALHTLPFGGV--------GESGMGAYHGKFSFDAFSHKKAVLY 443 (484)
T ss_pred HcC-CcceEEECCCcCCCCCCCCCCCCc--------CccccCccchHHHHHHhcceEEEEE
Confidence 676 5899999975321 33332 3467788888888999998877753
|
|
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=95.23 E-value=4.8 Score=42.26 Aligned_cols=257 Identities=20% Similarity=0.239 Sum_probs=138.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
|-..-.+++|+.-|+++.|- -||- +.+..++||-.+|..=|+- |+. ....... +....+.+|.. .++.+
T Consensus 108 ~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~AL~aGN~VIlK--ps~-~~~~~~~~l~~~l~~aglP~g~v~~v~ 181 (451)
T cd07103 108 GKRILVIKQPVGVVAAITPW---NFPAAMITRKIAPALAAGCTVVLK--PAE-ETPLSALALAELAEEAGLPAGVLNVVT 181 (451)
T ss_pred CcceEEEEeeceEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCc-cCcHHHHHHHHHHHHcCCCcccEEEEe
Confidence 44445678999999999995 3554 4466789999999864433 332 1111222 22344455543 22222
Q ss_pred chHHHHH-HHhhcCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-
Q 013679 183 GGAQAIS-AMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA- 258 (438)
Q Consensus 183 GGAQAIA-AlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA- 258 (438)
|....++ .|. .-|.+|+|+=-|..-+-. +|..... ...+-..+ -|-+ -+|-|++||.+..|..++.-+
T Consensus 182 ~~~~~~~~~l~----~~~~vd~V~ftGs~~~g~~v~~~aa~~-~~~~~lel-gG~~--~~iV~~dadl~~aa~~i~~~~~ 253 (451)
T cd07103 182 GSPAEIGEALC----ASPRVRKISFTGSTAVGKLLMAQAADT-VKRVSLEL-GGNA--PFIVFDDADLDKAVDGAIASKF 253 (451)
T ss_pred cCchhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhc-CCcEEEEC-CCCC--eEEECCCCCHHHHHHHHHHHHH
Confidence 2122222 232 237899887777655422 2221110 00133343 2544 345667799998888776421
Q ss_pred Cc---CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHh-------------
Q 013679 259 EH---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKA------------- 300 (438)
Q Consensus 259 EH---d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~s------------- 300 (438)
.+ .-.+...++. .++.. ++..+.+.+.++.+. . .+.+..+
T Consensus 254 ~~~GQ~C~a~~~v~V-~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~ 331 (451)
T cd07103 254 RNAGQTCVCANRIYV-HESIY-DEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKR 331 (451)
T ss_pred HhcCCCCCCCeeEEE-cHHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 11 1222233333 33343 555555555554431 0 0111111
Q ss_pred ----------------------h--c-CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhccccccc
Q 013679 301 ----------------------L--G-HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGSV 347 (438)
Q Consensus 301 ----------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAGai 347 (438)
+ + .| .++.++|++||++++|.. +-. ..|.++|.. .+..+++ +|.|
T Consensus 332 ~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~~i~t~d~~~~~~~~~~l~-~g~v 409 (451)
T cd07103 332 LGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDT-PYGLAAYVFTRDLARAWRVAEALE-AGMV 409 (451)
T ss_pred CCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceE
Confidence 0 0 12 345589999999999986 333 457777764 4666665 9999
Q ss_pred ccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 348 FLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 348 FlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
++...+. ++ ..+|- +|..|+.|..+++.|++.-++
T Consensus 410 ~vN~~~~---~~------~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v 449 (451)
T cd07103 410 GINTGLI---SD------AEAPFGGVKESGLGREGGKEGLEEYLETKYV 449 (451)
T ss_pred EECCCCC---CC------CCCCcCCCccCcCCccchHHHHHHHhceeEE
Confidence 9998652 21 12344 466777777777788776554
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=95.06 E-value=3.1 Score=44.40 Aligned_cols=261 Identities=15% Similarity=0.147 Sum_probs=141.1
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHc----CCc-hhh
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKA----GVT-HIL 180 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~----Gv~-eIy 180 (438)
|...-.++.|+.-|++..| .-||- ..+...+||-.+|..=|+- |+. ...... .+....+.+ |+. .++
T Consensus 124 ~~~~~~~~~P~GVv~~I~p---wN~P~~~~~~~~~~ALaaGN~VIlK--ps~-~~p~~~~~l~~~~~~al~~~glP~gvv 197 (478)
T cd07086 124 GHRLMEQWNPLGVVGVITA---FNFPVAVPGWNAAIALVCGNTVVWK--PSE-TTPLTAIAVTKILAEVLEKNGLPPGVV 197 (478)
T ss_pred CceEEEEEecceeEEEECC---CCcHHHHHHHHHHHHHHcCCeEEEE--CCC-cchHHHHHHHHHHHHhhhccCCCccce
Confidence 3344567899999999999 45885 5556788999999875544 432 111122 222344455 664 343
Q ss_pred hc--chHHHHHHHhhcCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh
Q 013679 181 KA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 256 (438)
Q Consensus 181 ~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa 256 (438)
.+ |+.. ++.+-. .-|.+|+|.==|..=+-. +|..-.. ...+-+.+ -|-+=++| |++||-+.+|-.++.
T Consensus 198 ~~v~g~~~-~~~~L~---~~~~vd~v~fTGs~~~g~~i~~~aa~~-~~~~~lEl-GG~~p~iV--~~dAdl~~Aa~~i~~ 269 (478)
T cd07086 198 NLVTGGGD-GGELLV---HDPRVPLVSFTGSTEVGRRVGETVARR-FGRVLLEL-GGNNAIIV--MDDADLDLAVRAVLF 269 (478)
T ss_pred EEEecCch-hHHHHh---cCCCCCEEEEECcHHHHHHHHHHHhcc-CCcEEeec-CCCCcEEE--cCCCCHHHHHHHHHH
Confidence 32 4333 433222 246688876555443211 1111100 01133333 26554443 556898887777653
Q ss_pred ccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------H-------HHHHH-----------
Q 013679 257 QAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------G-------EFASK----------- 299 (438)
Q Consensus 257 QAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------~-------~ia~~----------- 299 (438)
=+=+.. .+...++. .+++. ++..+.+.+.++.+. + . +.+..
T Consensus 270 ~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 347 (478)
T cd07086 270 AAVGTAGQRCTTTRRLIV-HESVY-DEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTG 347 (478)
T ss_pred HHHhccCCCCcCCeEEEE-cHHHH-HHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 322222 22223333 33343 666666665555432 0 0 01110
Q ss_pred --------------------------hh--c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChHHHHhhcc----
Q 013679 300 --------------------------AL--G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEKWESIIE---- 342 (438)
Q Consensus 300 --------------------------sl--~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~~l~~i~---- 342 (438)
-+ + .| .++.++|+|||++++|..-==| ..|.++|......-++
T Consensus 348 g~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~ 427 (478)
T cd07086 348 GKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGS 427 (478)
T ss_pred CCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcc
Confidence 11 1 12 3455899999999999863223 5788888754433333
Q ss_pred cccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 343 NAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 343 nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+|.|++...+. +.+.-+|-+ |..|+.+.-++++|++..++.
T Consensus 428 ~~G~v~iN~~~~--------~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07086 428 DCGIVNVNIPTS--------GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474 (478)
T ss_pred cceeEEECCCCC--------CCCCCCCCCCcccccCCccchHHHHHHhhceEEEE
Confidence 379999996432 222224654 557777777788898877764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=94.93 E-value=5.7 Score=41.96 Aligned_cols=256 Identities=21% Similarity=0.223 Sum_probs=142.1
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCch-hhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVTH-ILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~e-Iy~v- 182 (438)
+|...-.++.|+.-|++..|- -|| ...+...+||-.+|..=|+-.+|- ....... ..+...+|..+ ++.+
T Consensus 107 ~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~VvlKps~~---~p~~~~~l~~~~~~aGlP~gv~~~v 180 (454)
T cd07109 107 PGYFVYTVREPHGVTGHIIPW---NYPLQITGRSVAPALAAGNAVVVKPAED---APLTALRLAELAEEAGLPAGALNVV 180 (454)
T ss_pred CCceEEEEEeeeeEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEECCCC---ChHHHHHHHHHHHHcCcCccceEEE
Confidence 354566788999999999994 567 677778899999998766553332 1122223 34556667642 3322
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |.....+|. +-|.+|+|.==|..- -+++|++.- +-.. +.|-+ -+|-|++||.+..+.++
T Consensus 181 ~g~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p-----~~lE-lgG~~--~~iV~~daDl~~Aa~~i 248 (454)
T cd07109 181 TGLGAEAGAALV----AHPGVDHISFTGSVETGIAVMRAAAENVVP-----VTLE-LGGKS--PQIVFADADLEAALPVV 248 (454)
T ss_pred ecCchHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHhhcCCc-----EEEE-CCCCC--ceEECCCCCHHHHHHHH
Confidence 3 444444554 357799876555433 222332110 1111 12444 24446679999888777
Q ss_pred hhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCCC-----------------H----HHHHHhh--------
Q 013679 255 LSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLPR-----------------G----EFASKAL-------- 301 (438)
Q Consensus 255 LaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r-----------------~----~ia~~sl-------- 301 (438)
+.-+=+.. .+...++. .++.. ++..+.+.+.++.+.- . +.+.++.
T Consensus 249 ~~~~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~ 326 (454)
T cd07109 249 VNAIIQNAGQTCSAGSRLLV-HRSIY-DEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIVA 326 (454)
T ss_pred HHHHHhccCCCCccCcEEEE-cHHHH-HHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 75442222 23333444 33343 5555555554443320 0 0011110
Q ss_pred ------------------------------c---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhc
Q 013679 302 ------------------------------G---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 341 (438)
Q Consensus 302 ------------------------------~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i 341 (438)
. .| .++-++|+|||++++|.---=| ..|.++|+. .++.++
T Consensus 327 gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l 406 (454)
T cd07109 327 GGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRL 406 (454)
T ss_pred CCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhc
Confidence 0 12 2344789999999999842212 477888875 355666
Q ss_pred ccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
++|.||+..++. +....+|-+ |..|+.+.-++..|.+..++
T Consensus 407 -~~g~v~iN~~~~--------~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i 452 (454)
T cd07109 407 -RAGQVFVNNYGA--------GGGIELPFGGVKKSGHGREKGLEALYNYTQTKTV 452 (454)
T ss_pred -CcCeEEECCCCC--------CCCCCCCcCCcccCcCCccchHHHHHHHhceeEE
Confidence 589999996531 122345654 45666666667777776554
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.82 E-value=5.5 Score=42.89 Aligned_cols=262 Identities=16% Similarity=0.208 Sum_probs=138.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-hhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e-Iy~v-- 182 (438)
|...-.++.|+.-|++..|- -|| +..++..+||-.||..=|+- |+. ....... +......+|..+ ++.+
T Consensus 145 ~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~VVlK--Ps~-~tp~~~~~l~~~~~eaGlP~gvv~~v~ 218 (500)
T cd07083 145 GEDNESFYVGLGAGVVISPW---NFPVAIFTGMIVAPVAVGNTVIAK--PAE-DAVVVGYKVFEIFHEAGFPPGVVQFLP 218 (500)
T ss_pred CceEEEEEeccceEEEEcCC---ccHHHHHHHHHHHHHHcCCeEEEe--CCC-cchHHHHHHHHHHHHcCCCCCceEEEe
Confidence 43444568999999999994 577 56678889999999875544 442 2212222 223445666652 2222
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhc-CCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQ-NSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~-~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |...-.+|. +-|+||+|.==|..-+- +|+++.+ +..-.| +=-+.|-+ -+|-|++||.+.+|-.+
T Consensus 219 g~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v-~lElgG~~--~~iV~~dadl~~aa~~i 291 (500)
T cd07083 219 GVGEEVGAYLT----EHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRL-YVETGGKN--AIIVDETADFELVVEGV 291 (500)
T ss_pred CCCchhHHHHh----cCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcE-EEecCCCC--eEEECCCCCHHHHHHHH
Confidence 2 333333332 24889888655554332 2222100 000001 01122333 34455679999988777
Q ss_pred hhcc-CcC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C---H----HHHHHh--------
Q 013679 255 LSQA-EHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R---G----EFASKA-------- 300 (438)
Q Consensus 255 LaQA-EHd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r---~----~ia~~s-------- 300 (438)
+.-+ .+. -.+...++... +.. +++.+.+.+.++.+. + . +.+..+
T Consensus 292 ~~~~f~~~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~ 369 (500)
T cd07083 292 VVSAFGFQGQKCSAASRLILTQ-GAY-EPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVL 369 (500)
T ss_pred HHHHHhhcCCCCCCCeeEEEcH-HHH-HHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEe
Confidence 6544 222 22333343333 233 555555555554331 0 0 111111
Q ss_pred --------------------------hc---CC---eEEEeC--CHHHHHHHhhhhccccc--eecccChH---HHHhhc
Q 013679 301 --------------------------LG---HS---FMVFAR--DMLEGISFSNLYAPEHL--IVNVKDAE---KWESII 341 (438)
Q Consensus 301 --------------------------l~---~g---~ii~v~--~l~ea~~~~N~~APEHL--el~~~~p~---~~l~~i 341 (438)
+. .| .++.++ |+|||++++|.. |-.| .|.++|.. .+..++
T Consensus 370 gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~-~~gL~~~v~t~d~~~~~~~~~~l 448 (500)
T cd07083 370 GGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANST-PYGLTGGVYSRKREHLEEARREF 448 (500)
T ss_pred CCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCC-CCCceEEEEeCCHHHHHHHHHhC
Confidence 10 12 233478 999999999985 4555 66787864 355566
Q ss_pred ccccccccCCCCcccccccccCCCCCCCCCCc-----c-ccccCcccccccceeeEEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPTYGY-----A-RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~-----A-R~~sgLsv~~FlK~~s~~~ 393 (438)
.+|.|+++..+. ++ +++-+|-+|. . |..|.-+++.|++..++..
T Consensus 449 -~~g~v~iN~~~~---~~----~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~ 498 (500)
T cd07083 449 -HVGNLYINRKIT---GA----LVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAE 498 (500)
T ss_pred -CeeEEEECCCCC---CC----CCCCCCCCccccccCCCcccCHHHHHHhhheeEEEE
Confidence 689999997422 11 3345677664 3 2223345556777666543
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=94.76 E-value=5.1 Score=42.73 Aligned_cols=253 Identities=20% Similarity=0.194 Sum_probs=135.1
Q ss_pred EEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhh-c-ch
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILK-A-GG 184 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~-v-GG 184 (438)
..-.++.|+.-|++..|- -||-. .+...+||-.||..=|+- |+. ........| ...+.+|.. .++. + |.
T Consensus 135 ~~~~~~~P~GVv~~I~p~---N~P~~~~~~~i~~ALaaGN~VvlK--Ps~-~tp~~~~~l~~~~~~aglP~gvv~~v~g~ 208 (477)
T cd07113 135 TAFTRREPVGVVAGIVPW---NFSVMIAVWKIGAALATGCTIVIK--PSE-FTPLTLLRVAELAKEAGIPDGVLNVVNGK 208 (477)
T ss_pred eEEEEEeecceEEEEcCC---ChHHHHHHHHHHHHHHcCCEEEEE--CCC-CCcHHHHHHHHHHHHcCcCCCcEEEEecC
Confidence 344678999999999984 57744 445567999999875543 432 111222222 344555543 2222 2 32
Q ss_pred HHHHHHHhhcCCCCCCceEE--ecCCc----HHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc
Q 013679 185 AQAISAMAWGTESCPKVEKI--FGPGN----QYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 258 (438)
Q Consensus 185 AQAIAAlAyGTetIp~VDkI--vGPGN----~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA 258 (438)
.. ++..-. .-|.||+| +|.=. +.-.+|+.+- .+-.. +-|-+= +|-|++||.+..|-.++.=+
T Consensus 209 ~~-~~~~L~---~~~~v~~V~fTGS~~~G~~i~~~aa~~~~-----~~~lE-lGGkn~--~iV~~dAdl~~aa~~i~~~~ 276 (477)
T cd07113 209 GA-VGAQLI---SHPDVAKVSFTGSVATGKKIGRQAASDLT-----RVTLE-LGGKNA--AAFLKDADIDWVVEGLLTAG 276 (477)
T ss_pred ch-HHHHHh---cCCCCCEEEEECcHHHHHHHHHHHHhhcC-----ceEee-cCCCCe--eEECCCCCHHHHHHHHHHHH
Confidence 22 332111 24779998 55532 1122222110 01111 122222 33456799999888776433
Q ss_pred -CcCC---CCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhh-----------
Q 013679 259 -EHGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKAL----------- 301 (438)
Q Consensus 259 -EHd~---~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl----------- 301 (438)
-+.- .+...++. .++.. +++.+.+.+.++.+. . .+.++.+.
T Consensus 277 f~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~ 354 (477)
T cd07113 277 FLHQGQVCAAPERFYV-HRSKF-DELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGE 354 (477)
T ss_pred HhhCCCCCcCCcEEEE-CHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 2222 22223333 33343 556555555554431 0 01111110
Q ss_pred --------------------------c-CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhccccccc
Q 013679 302 --------------------------G-HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESIIENAGSV 347 (438)
Q Consensus 302 --------------------------~-~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~i~nAGai 347 (438)
+ .| .|+-++|.|||++++|..-= =-..|.++|.. .++.+++ +|.|
T Consensus 355 ~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~-~G~v 433 (477)
T cd07113 355 ALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIE-AGTV 433 (477)
T ss_pred CCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-cceE
Confidence 0 01 23447899999999997621 12477888864 4666664 8999
Q ss_pred ccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 348 FLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 348 FlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++..++. .| ..+|- +|..|+.|.-++++|.+..++.
T Consensus 434 ~iN~~~~---~~------~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 474 (477)
T cd07113 434 WVNMHTF---LD------PAVPFGGMKQSGIGREFGSAFIDDYTELKSVM 474 (477)
T ss_pred EECCCCC---CC------CCCCCCCCccccCCccchHHHHHHhhceEEEE
Confidence 9996542 11 22455 4667887778888898877764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=94.67 E-value=6.8 Score=41.22 Aligned_cols=322 Identities=16% Similarity=0.165 Sum_probs=163.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK-SAETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~-~~~~~ 102 (438)
...+-.+.++++.+.++++.|+=..-.++.-.+ .-.+...-+..+++.++.|.+... +....
T Consensus 33 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk-----------------~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~ 95 (443)
T cd07152 33 PPRERAAVLRRAADLLEEHADEIADWIVRESGS-----------------IRPKAGFEVGAAIGELHEAAGLPTQPQGEI 95 (443)
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-----------------CHHHHHHHHHHHHHHHHHHHHhHHHhCCcc
Confidence 344445566666666776666533222332221 011112234455555555543211 11111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCH-HHH-HHHHHcCCc-h
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVL-YCAKKAGVT-H 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL-~AA~l~Gv~-e 178 (438)
....+|...-.++.|+.-|++..|- -||-.. +...+||-.+|..=|+-.+|-. .... .+| .+...+|+. .
T Consensus 96 ~~~~~g~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~ALaaGN~VvlKps~~~---p~~~~~~l~~~~~~ag~P~g 169 (443)
T cd07152 96 LPSAPGRLSLARRVPLGVVGVISPF---NFPLILAMRSVAPALALGNAVVLKPDPRT---PVSGGVVIARLFEEAGLPAG 169 (443)
T ss_pred ccccCCceeEEEEecceEEEEECCC---CcHHHHHHHHHHHHHHcCCEEEEECCccc---chhHHHHHHHHHHHhCcCcC
Confidence 1122454455688999999999883 455433 4467899999987665544321 1222 122 355566653 2
Q ss_pred hhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 179 ILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 179 Iy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
++.+ ||...-.+| -.-|.||+|.==|..=+ ++|+++- .+-..+ .|-+= +|-|++||.+..
T Consensus 170 vv~~v~g~~~~~~~l----~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~-----~~~lEl-GGk~~--~iV~~dAdl~~a 237 (443)
T cd07152 170 VLHVLPGGADAGEAL----VEDPNVAMISFTGSTAVGRKVGEAAGRHLK-----KVSLEL-GGKNA--LIVLDDADLDLA 237 (443)
T ss_pred cEEEecCChHHHHHH----hcCCCCCEEEEECCHHHHHHHHHHHHhcCC-----cEEEEC-CCCCe--EEECCCCCHHHH
Confidence 3222 554432333 12478998843333222 1222211 133332 25553 344567999988
Q ss_pred HHhhh-hccCcC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC-
Q 013679 251 AADLL-SQAEHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH- 303 (438)
Q Consensus 251 AaDLL-aQAEHd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~- 303 (438)
+-.++ +---+. -.+...++.. ++.. +++.+.+.++++.+. . .+.+..+..+
T Consensus 238 a~~i~~~~~~~~GQ~C~a~~rv~V~-~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 238 ASNGAWGAFLHQGQICMAAGRHLVH-ESVA-DAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHhhcCCCCcCCeeEEEc-HHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 88765 222222 2232233333 2353 777777776666552 1 1111222111
Q ss_pred ----------------------------------C---eEEEeCCHHHHHHHhhhhccc-cceecccChHH---HHhhcc
Q 013679 304 ----------------------------------S---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAEK---WESIIE 342 (438)
Q Consensus 304 ----------------------------------g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~~---~l~~i~ 342 (438)
| .|+-++|.|||++++|..-=- ...|.++|+.. +..+++
T Consensus 316 a~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~ 395 (443)
T cd07152 316 ARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLR 395 (443)
T ss_pred CEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCC
Confidence 1 234478999999999975322 25788888753 555664
Q ss_pred cccccccCCCCcccccccccCCCCCCCCCC-----cc-ccccCcccccccceeeE
Q 013679 343 NAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YA-RMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 343 nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~A-R~~sgLsv~~FlK~~s~ 391 (438)
+|.|++...+.. + ...+|-+| .. |..|..+++.|++.-++
T Consensus 396 -~G~v~iN~~~~~---~-----~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~ 441 (443)
T cd07152 396 -TGMLHINDQTVN---D-----EPHNPFGGMGASGNGSRFGGPANWEEFTQWQWV 441 (443)
T ss_pred -cCeEEECCCCCC---C-----CCCCCCCCcccccCCCccCcHHHHHHhhceeEE
Confidence 999999965431 1 12356555 34 44444456667665543
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=8.2 Score=41.76 Aligned_cols=326 Identities=13% Similarity=0.123 Sum_probs=177.0
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~ 101 (438)
.+..+-.+..+.+-+.++++.|+=....++.|-+... +..+. .+ ....+-|+.++++++++.+..... .+
T Consensus 26 ~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~------ea~~~--Ev-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 96 (493)
T PTZ00381 26 RPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF------ETKMT--EV-LLTVAEIEHLLKHLDEYLKPEKVDTVG 96 (493)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH------HHHHH--HH-HHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 3444556667888888888988888888887753210 00000 11 134556888888998886544322 22
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---HHHH-HH---
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LYCA-KK--- 173 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L~AA-~l--- 173 (438)
.. .++ ..--++.|+.-|++..|= -|| ...+.-.+||-.||..=|+= |+. ..|.+ |.-. +.
T Consensus 97 ~~--~~~-~~~v~~~PlGVV~iI~Pw---N~Pl~l~~~~l~~ALaaGN~VIlK--Pse----~tp~t~~~l~~ll~~~lp 164 (493)
T PTZ00381 97 VF--GPG-KSYIIPEPLGVVLVIGAW---NYPLNLTLIPLAGAIAAGNTVVLK--PSE----LSPHTSKLMAKLLTKYLD 164 (493)
T ss_pred cc--CCC-ceEEEEecCcEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCc----cCHHHHHHHHHHHHHhCC
Confidence 11 122 233477899999999993 577 55677788999999875544 432 22322 2111 11
Q ss_pred cCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHH----H--HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCH
Q 013679 174 AGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQY----V--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 247 (438)
Q Consensus 174 ~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~y----V--~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp 247 (438)
.|+=.+. .||.....+|.= .++|+|+==|..= | ++|+.+.- | +=-+.|-+ -+|-|++||.
T Consensus 165 ~~~v~vv-~g~~~~~~~l~~-----~~~d~i~FTGS~~vG~~V~~~aa~~l~p-----v-~lElGGk~--p~iV~~dAdl 230 (493)
T PTZ00381 165 PSYVRVI-EGGVEVTTELLK-----EPFDHIFFTGSPRVGKLVMQAAAENLTP-----C-TLELGGKS--PVIVDKSCNL 230 (493)
T ss_pred cCEEEEe-cCCHHHHHHHHh-----CCCCEEEEECCHHHHHHHHHHHHhcCCc-----E-EEEcCCCC--ceEEcCCCCH
Confidence 1221222 255554444431 2388876555432 2 33333210 0 00122322 2445567888
Q ss_pred HHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----------------C-HHHHHHhh-----
Q 013679 248 VHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----------------R-GEFASKAL----- 301 (438)
Q Consensus 248 ~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----------------r-~~ia~~sl----- 301 (438)
+..|-.++.-+=.. -.|.-.++.. ++.. ++..+.+.+.++.+- + .+-+.+-+
T Consensus 231 ~~Aa~~i~~g~~~naGQ~C~A~~~vlV~-~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga 308 (493)
T PTZ00381 231 KVAARRIAWGKFLNAGQTCVAPDYVLVH-RSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGG 308 (493)
T ss_pred HHHHHHHHHHHHhhcCCcCCCCCEEEEe-HHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCC
Confidence 88877776432221 2232333332 2232 554444444443320 0 01111111
Q ss_pred ------------------------------c---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhh
Q 013679 302 ------------------------------G---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESI 340 (438)
Q Consensus 302 ------------------------------~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~ 340 (438)
. .| .|+-++|+|||++++|.. |-. +.+.++|.. .++.+
T Consensus 309 ~~~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~-~~gLa~~vft~d~~~~~~~~~~ 387 (493)
T PTZ00381 309 KVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSR-PKPLALYYFGEDKRHKELVLEN 387 (493)
T ss_pred cEEECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcC-CCCceEEEECCCHHHHHHHHHh
Confidence 0 01 344579999999999985 444 467787875 35555
Q ss_pred cccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEEe
Q 013679 341 IENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQSL 394 (438)
Q Consensus 341 i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~~ 394 (438)
+ ++|.|++....... .++-+|- +|..|+.|.-+.++|.+.-|+..-
T Consensus 388 ~-~sG~v~IN~~~~~~-------~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~ 438 (493)
T PTZ00381 388 T-SSGAVVINDCVFHL-------LNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNK 438 (493)
T ss_pred C-CcceEEECCccccc-------cCCCCCCCCcCcccccccchHHHHHhccceeEEEEc
Confidence 4 47999999643111 1333554 467888888899999987776543
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.25 E-value=8.8 Score=40.74 Aligned_cols=77 Identities=25% Similarity=0.201 Sum_probs=52.8
Q ss_pred eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----Cccc
Q 013679 305 FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYAR 375 (438)
Q Consensus 305 ~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR 375 (438)
.++.++|.|||++++|.---=| ..|.++|+. .++.+++ +|.||++... . +.-+|-+ |..|
T Consensus 380 ~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~-~G~v~iN~~~----~------~~~~PfgG~k~SG~G~ 448 (466)
T cd07138 380 SIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLR-AGQVHINGAA----F------NPGAPFGGYKQSGNGR 448 (466)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcC-cceEEECCCC----C------CCCCCcCCcccccCCc
Confidence 3455799999999999853222 567788875 4666664 8999999632 1 1124654 5667
Q ss_pred cccCcccccccceeeEE
Q 013679 376 MYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 376 ~~sgLsv~~FlK~~s~~ 392 (438)
+.|.-++..|++..++.
T Consensus 449 ~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 449 EWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred cchHHHHHHhcceeEEe
Confidence 77777788888877654
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=94.19 E-value=9.9 Score=41.10 Aligned_cols=263 Identities=18% Similarity=0.177 Sum_probs=134.9
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v- 182 (438)
+|.....++.|+.-|+++.| .-|| +..++..+||-.||..=|+-.+|- ...... +......+|.. .++.+
T Consensus 157 ~~~~~~~~~~P~GVV~~I~P---~N~P~~~~~~~i~~ALaaGN~VVlKPs~~---tp~~~~~l~~~~~~aGlP~gvv~vv 230 (511)
T TIGR01237 157 EGETNRYFYQPRGVAVVISP---WNFPMAIAVGMTVAPIVTGNCVVLKPAET---STVIAAKIVEILIEAGLPPGVFQFV 230 (511)
T ss_pred CCceeEEEEecceeEEEECC---CCcHHHHHHHHHHHHHHcCCEEEEECCCC---CcHHHHHHHHHHHHhCCCCCcEEEc
Confidence 35455677899999999999 3566 456678899999998755443331 111122 22234445544 22222
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCC-cccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEA-MISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~-~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
| |...-.+|. +-|.||+|.==|..-| .+|+...+..+. .|-. -+.|-+ -+|-|++||.+.+|-.
T Consensus 231 ~g~~~~~~~~L~----~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~l-ElgG~~--p~iV~~dAdl~~aa~~ 303 (511)
T TIGR01237 231 PGKGSEVGSYLV----NHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIA-EMGGKD--AIIVDESADIEQAVAG 303 (511)
T ss_pred cCCCchhHHHHh----cCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEe-ccCCCC--eEEECCCCCHHHHHHH
Confidence 2 333222232 2478898854444332 222100000000 0100 112322 3455567898887777
Q ss_pred hhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC------------------CH----HHHHHhh------
Q 013679 254 LLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP------------------RG----EFASKAL------ 301 (438)
Q Consensus 254 LLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~------------------r~----~ia~~sl------ 301 (438)
++.-+=.. -.+...++.. ++.. +++.+.+.+.++.+. .. +.+..+.
T Consensus 304 i~~~~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l 381 (511)
T TIGR01237 304 AVYSAFGFTGQKCSACSRVVVL-SPVY-DAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELA 381 (511)
T ss_pred HHHHHHhcCCCCcccceEEEEe-hhHH-HHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEE
Confidence 66433222 2233333333 2332 555555554443331 00 1111111
Q ss_pred ------------------------------c-CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhhcc
Q 013679 302 ------------------------------G-HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESIIE 342 (438)
Q Consensus 302 ------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l~~i~ 342 (438)
+ .| .++.++|+|||++++|.. +-.| .|.++|.. .+..++
T Consensus 382 ~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~-~~gL~a~i~t~d~~~~~~~~~~l- 459 (511)
T TIGR01237 382 IGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGT-EYGLTGGVYSNTRDHIERAAAEF- 459 (511)
T ss_pred ECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHHHhC-
Confidence 1 12 234588999999999984 4444 77788874 345555
Q ss_pred cccccccCCCCcccccccccCCCCCCCCC-----Ccccc-ccCcccccccceeeEEE
Q 013679 343 NAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARM-YGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 343 nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~-~sgLsv~~FlK~~s~~~ 393 (438)
.+|.|++..+..-. .++-+|-+ |..|+ -|..+++.|++..++..
T Consensus 460 ~~G~v~iN~~~~~~-------~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~ 509 (511)
T TIGR01237 460 EVGNLYFNRTITGA-------IVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTE 509 (511)
T ss_pred CcceEEECCCCCCC-------CCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEE
Confidence 47999999753211 12234544 55543 34456677888777643
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.06 E-value=10 Score=40.84 Aligned_cols=259 Identities=19% Similarity=0.212 Sum_probs=139.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-hhh-c-
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILK-A- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e-Iy~-v- 182 (438)
|...-.+..|+.-|++..|= -||-.. +...+||-.+|..=|+- |+. ....... +..+...+|+.+ ++. +
T Consensus 148 ~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VvlK--ps~-~~p~~~~~l~~~~~~aGlP~g~v~~v~ 221 (494)
T PRK09847 148 HELAMIVREPVGVIAAIVPW---NFPLLLTCWKLGPALAAGNSVILK--PSE-KSPLSAIRLAGLAKEAGLPDGVLNVVT 221 (494)
T ss_pred CceeEEEecceeEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEe--CCC-CChHHHHHHHHHHHHcCcCcCcEEEEe
Confidence 33344678999999999994 467654 44567999999875544 432 1112222 223445566542 222 1
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCC--CCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccC
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS--EAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 259 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~--~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE 259 (438)
| |.....+|. +-|.||+|.==|..=|- |++...- ....-+=+-.|=.-.+||-|+.+|.+..+-.++.=+=
T Consensus 222 g~~~~~~~~L~----~~~~vd~v~fTGs~~~g--~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~ 295 (494)
T PRK09847 222 GFGHEAGQALS----RHNDIDAIAFTGSTRTG--KQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIF 295 (494)
T ss_pred CCChhHHHHHh----cCCCCCEEEEECCHHHH--HHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHH
Confidence 2 444444442 36889998766663321 2111000 0001111223333455666666788876655542211
Q ss_pred c-C---CCCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHh------------
Q 013679 260 H-G---PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKA------------ 300 (438)
Q Consensus 260 H-d---~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~s------------ 300 (438)
. . -.+. -++| .+++. +++.+.+.+.++.+. . .+.+..+
T Consensus 296 ~~aGQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~ 372 (494)
T PRK09847 296 YNQGQVCIAGTRLLL--EESIA-DEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRN 372 (494)
T ss_pred hcCCCCCCCCcEEEE--cHHHH-HHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCcc
Confidence 1 1 1222 3444 33453 666666665555441 0 0011111
Q ss_pred ---------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhhcccccccc
Q 013679 301 ---------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESIIENAGSVF 348 (438)
Q Consensus 301 ---------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~nAGaiF 348 (438)
+. .| .++-++|.+||++++|.. +-. ..|.++|+.. +..++ .+|.|+
T Consensus 373 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gLsa~v~t~d~~~a~~~~~~l-~~G~v~ 450 (494)
T PRK09847 373 AGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDS-QYGLGAAVWTRDLSRAHRMSRRL-KAGSVF 450 (494)
T ss_pred CCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhC-CcceEE
Confidence 11 12 234589999999999984 333 4778888754 66676 479999
Q ss_pred cCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 349 LGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 349 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..++. |+- .+|- +|..|+.|.-+++.|.+..++.
T Consensus 451 iN~~~~---~~~------~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 490 (494)
T PRK09847 451 VNNYND---GDM------TVPFGGYKQSGNGRDKSLHALEKFTELKTIW 490 (494)
T ss_pred ECCCCC---CCC------CCCcCCCcccccCccchHHHHHHhhceEEEE
Confidence 997542 221 1454 4667777777778888876653
|
|
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=94.03 E-value=6.6 Score=41.93 Aligned_cols=248 Identities=17% Similarity=0.158 Sum_probs=133.0
Q ss_pred EEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---HH-----HHHHcCCch-hh-
Q 013679 112 KRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LY-----CAKKAGVTH-IL- 180 (438)
Q Consensus 112 g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L~-----AA~l~Gv~e-Iy- 180 (438)
-.++.|+.-|++..|= -|| .+.+...+||-.+|..=|+ -|+. ..|.+ |+ +...+|+.+ ++
T Consensus 127 ~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~Vvl--Kps~----~~p~~~~~l~~l~~~~~~~aglP~gv~~ 197 (474)
T cd07130 127 MEQWNPLGVVGVITAF---NFPVAVWGWNAAIALVCGNVVVW--KPSP----TTPLTAIAVTKIVARVLEKNGLPGAIAS 197 (474)
T ss_pred EEEEecceeEEEEccC---CCHHHHHHHHhhHHHHcCCeEEe--eCCc----cCHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 3567999999999883 466 3344577899999987444 3432 22322 11 234555531 11
Q ss_pred hc-chHHHHHHHhhcCCCCCCceEEe--cCCcH--HHH--HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 181 KA-GGAQAISAMAWGTESCPKVEKIF--GPGNQ--YVT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 181 ~v-GGAQAIAAlAyGTetIp~VDkIv--GPGN~--yV~--~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
-+ |+...-.+|. .=|+||+|. |--.. .|. +|+++ .. +-+. +-|-+=++| +++||.+..|-.
T Consensus 198 ~v~g~~~~~~~L~----~~~~vd~V~fTGs~~~g~~i~~~aa~~~-~~----~~lE-lGGk~p~iV--~~dadl~~Aa~~ 265 (474)
T cd07130 198 LVCGGADVGEALV----KDPRVPLVSFTGSTAVGRQVGQAVAARF-GR----SLLE-LGGNNAIIV--MEDADLDLAVRA 265 (474)
T ss_pred EEeCChhHHHHHh----cCCCCCEEEEECchHHHHHHHHHHHhcC-CC----EEEE-cCCCCeEEE--CCCCCHHHHHHH
Confidence 12 4443222222 238899988 44222 121 22222 11 3344 335554444 445888877666
Q ss_pred hhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh-------
Q 013679 254 LLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA------- 300 (438)
Q Consensus 254 LLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s------- 300 (438)
++.-+=. --.+...++.. +++. ++..+.+.+.++.+.- .+.++++
T Consensus 266 i~~~~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v 343 (474)
T cd07130 266 VLFAAVGTAGQRCTTTRRLIVH-ESIY-DEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTV 343 (474)
T ss_pred HHHHHHhcCCCCCcCCeEEEEc-HhHH-HHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 5532211 12233333333 2343 6666666655555420 0111111
Q ss_pred ---------------------------h-c--CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHHHHhhc----
Q 013679 301 ---------------------------L-G--HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEKWESII---- 341 (438)
Q Consensus 301 ---------------------------l-~--~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~~l~~i---- 341 (438)
+ + .| .|+.++|.|||++++|.. |-. ..|.++|......-+
T Consensus 344 ~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~-~~gL~a~v~t~d~~~a~~~~~~~~ 422 (474)
T cd07130 344 LFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEV-PQGLSSSIFTTDLRNAFRWLGPKG 422 (474)
T ss_pred EECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHhhcC
Confidence 1 1 12 234589999999999986 444 467788865543332
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
-++|.|++...+. +...-+|- +|..|+.|.-+++.|++..++
T Consensus 423 ~~~g~v~iN~~~~--------~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~ 469 (474)
T cd07130 423 SDCGIVNVNIGTS--------GAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTC 469 (474)
T ss_pred cceEEEEEcCCCC--------CCCCCCCcCccccccCCccchHHHHHHHhheEEE
Confidence 3689999995321 11111354 467788888888999987764
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=11 Score=40.75 Aligned_cols=263 Identities=16% Similarity=0.169 Sum_probs=137.7
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-hhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e-Iy~v- 182 (438)
+|.....++.|+.-|++..| .-||=.. +...+||-.||..=|+- |+... ..... +......+|+.+ ++.+
T Consensus 161 ~g~~~~~~~~P~GVv~~I~P---wN~P~~~~~~~i~~ALaaGN~VVlK--Ps~~t-p~~a~~l~~~l~~aGlP~gvv~vv 234 (514)
T PRK03137 161 PGEHNRYFYIPLGVGVVISP---WNFPFAIMAGMTLAAIVAGNTVLLK--PASDT-PVIAAKFVEVLEEAGLPAGVVNFV 234 (514)
T ss_pred CCceEEEEEecCcEEEEECC---CccHHHHHHHHHHHHHHcCCEEEEE--CCCCC-cHHHHHHHHHHHHhCCCCCcEEEe
Confidence 45455678899999999999 4677444 55778999999875544 43211 12222 233455666542 3222
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEE--ecCCcHHHHHHHHHhcCC----CC-cccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKI--FGPGNQYVTAAKMILQNS----EA-MISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkI--vGPGN~yV~~AK~~v~~~----~~-~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
| |...-.+|. .-|+||+| +|.--.--..++..-... +. .| +=-+-|-+= +|-+++||.+.++-.
T Consensus 235 ~g~~~~~~~~L~----~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v-~lElgGk~~--~iV~~daDl~~Aa~~ 307 (514)
T PRK03137 235 PGSGSEVGDYLV----DHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRV-IAEMGGKDA--IVVDEDADLDLAAES 307 (514)
T ss_pred ecCchHHHHHHh----cCCCcCEEEEECCcHHHHHHHHHHhcccccccccceE-EecCCCCCe--EEECCCCCHHHHHHH
Confidence 2 444333343 24788888 554322211111110000 00 01 001223332 333567899887777
Q ss_pred hhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------------HHHHHHh--------
Q 013679 254 LLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------------GEFASKA-------- 300 (438)
Q Consensus 254 LLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------------~~ia~~s-------- 300 (438)
++.-+=+. -.+...++. .++.. +++.+.+.+.++.+. . .+.++.+
T Consensus 308 i~~~~~~~~GQ~C~a~~rv~V-~~~v~-d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~ 385 (514)
T PRK03137 308 IVASAFGFSGQKCSACSRAIV-HEDVY-DEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVL 385 (514)
T ss_pred HHHHHHhCCCCCCccCeEEEE-eHHHH-HHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEe
Confidence 65433222 223333444 33343 666666655554431 0 0111111
Q ss_pred --------------------------h--c-CC---eEEEeCCHHHHHHHhhhhccccc--eecccChHH---HHhhccc
Q 013679 301 --------------------------L--G-HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAEK---WESIIEN 343 (438)
Q Consensus 301 --------------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~~---~l~~i~n 343 (438)
+ + .| .++.++|++||++++|.. +-.| .|.++|... +..+++
T Consensus 386 Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~-~~gL~a~v~t~d~~~a~~~~~~l~- 463 (514)
T PRK03137 386 GGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNT-EYGLTGAVISNNREHLEKARREFH- 463 (514)
T ss_pred CCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHHhCC-
Confidence 0 0 12 334578999999999987 4444 777888764 555654
Q ss_pred ccccccCCCCcccccccccCCCCCCCCCCc-----c-ccccCcccccccceeeEEE
Q 013679 344 AGSVFLGEWTPESVGDYASGTNHVLPTYGY-----A-RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 344 AGaiFlG~~sp~a~GDY~aGpNHvLPT~G~-----A-R~~sgLsv~~FlK~~s~~~ 393 (438)
+|.|+++..+.-. .++.+|-+|. . |.-+.-+++.|++..++..
T Consensus 464 ~G~v~IN~~~~~~-------~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~ 512 (514)
T PRK03137 464 VGNLYFNRGCTGA-------IVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSE 512 (514)
T ss_pred cCeEEECCCCCCC-------CCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEE
Confidence 8999999643221 2235676654 4 2223335577888777654
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=11 Score=40.30 Aligned_cols=254 Identities=17% Similarity=0.162 Sum_probs=136.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc----hhhh
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT----HILK 181 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~----eIy~ 181 (438)
|...-.++.|+.-|++..| .-||- +.+...+||-.||..=|+ -|+. ....... +..+.+.+|.. .+..
T Consensus 133 ~~~~~~~~~PlGVv~~I~p---~N~P~~~~~~~~~~ALaaGN~Vv~--Kps~-~~p~t~~~l~~~~~~aglP~g~v~~v~ 206 (488)
T PRK13252 133 GSFVYTRREPLGVCAGIGA---WNYPIQIACWKSAPALAAGNAMIF--KPSE-VTPLTALKLAEIYTEAGLPDGVFNVVQ 206 (488)
T ss_pred CceEEEEEeeeeEEEEECC---CchHHHHHHHHHHHHHhcCCeEEE--eCCc-cCcHHHHHHHHHHHHcCcCcccEEEEe
Confidence 4444567799999999988 35774 455567899999987544 3442 1112222 22344556553 2222
Q ss_pred cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 182 AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 182 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
|+...-.+|. +-|.||+|.==|..-+ .+|+.+. . |-. -+-|-+ -+|-|++||.+..+-.++
T Consensus 207 -g~~~~~~~L~----~~~~vd~V~fTGS~~~g~~i~~~aa~~l~-~----~~l-ElgG~~--p~iV~~dAdl~~A~~~i~ 273 (488)
T PRK13252 207 -GDGRVGAWLT----EHPDIAKVSFTGGVPTGKKVMAAAAASLK-E----VTM-ELGGKS--PLIVFDDADLDRAADIAM 273 (488)
T ss_pred -cCcHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCC-c----EEE-EcCCCC--eeEECCCCCHHHHHHHHH
Confidence 3233222232 3578999883332222 2222210 0 100 022333 244456789998777766
Q ss_pred h-ccCcC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC------------------C----HHHHHHh---------
Q 013679 256 S-QAEHG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP------------------R----GEFASKA--------- 300 (438)
Q Consensus 256 a-QAEHd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~------------------r----~~ia~~s--------- 300 (438)
. -..+. -.+...++.. ++.. +++.+.+.+.++.+. . .+.+..+
T Consensus 274 ~~~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~ 351 (488)
T PRK13252 274 LANFYSSGQVCTNGTRVFVQ-KSIK-AAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLC 351 (488)
T ss_pred HHHHhhcCCCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 2 11221 1222333333 2343 555555555444331 0 0111111
Q ss_pred ------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHh
Q 013679 301 ------------------------------L--G-HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWES 339 (438)
Q Consensus 301 ------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~ 339 (438)
+ + .| .++.++|.|||++++|.. |-. ..|.++|.. ++..
T Consensus 352 gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~a~I~t~d~~~~~~~~~ 430 (488)
T PRK13252 352 GGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDT-EYGLAAGVFTADLSRAHRVIH 430 (488)
T ss_pred CCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCC-CCCCeEEEEeCCHHHHHHHHH
Confidence 1 1 13 345589999999999986 333 567778764 4667
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+++ +|.|++..+... +..+|- +|..|+.|.-+++.|.+..++..
T Consensus 431 ~l~-~G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~ 479 (488)
T PRK13252 431 QLE-AGICWINTWGES---------PAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQV 479 (488)
T ss_pred hcC-ccEEEECCCCCC---------CCCCCCCCCccCcCCcCChHHHHHHhcceEEEEE
Confidence 775 799999964321 112444 56777777778888988777653
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.73 E-value=11 Score=40.12 Aligned_cols=329 Identities=17% Similarity=0.164 Sum_probs=167.0
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
.++-.+..+.+.+.++++.|+=..-.++...+- +.-...|+. ...+.++..+++++++.... .....
T Consensus 44 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~~ev~------~~~~~~~~~~~~~~~~~~~~---~~~~~ 110 (457)
T PRK09406 44 FAQRARWANAAADLLEAEADQVAALMTLEMGKT----LASAKAEAL------KCAKGFRYYAEHAEALLADE---PADAA 110 (457)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCC----HHHHHHHHH------HHHHHHHHHHHHHHHHhCCc---ccccc
Confidence 344455566666666666665443334433321 000000111 33444555555555442111 11000
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc-hhhh
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILK 181 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~-eIy~ 181 (438)
..++...-.++.|+.-|++..|- -|| ...++..+||-.+|+.=|+= |+. .-...... ......+|.. .++.
T Consensus 111 ~~~~~~~~~~~~P~GvV~~I~Pw---N~Pl~~~~~~~~~ALaaGN~VV~K--ps~-~~p~~~~~l~~l~~~aGlP~gvv~ 184 (457)
T PRK09406 111 AVGASRAYVRYQPLGVVLAVMPW---NFPLWQVVRFAAPALMAGNVGLLK--HAS-NVPQTALYLADLFRRAGFPDGCFQ 184 (457)
T ss_pred CCCCceEEEEEecceeEEEECCc---cchHHHHHHHHHHHHHcCCEEEEE--CCC-cCcHHHHHHHHHHHHhCCCcCcEE
Confidence 01223344578999999999883 455 44566778999999875544 542 21122222 2345567764 5554
Q ss_pred c--chHHHHHHHhhcCCCCCCceEEecCCcHHHHHHH-HHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc
Q 013679 182 A--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 258 (438)
Q Consensus 182 v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK-~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA 258 (438)
+ ||.....+|. +=|++|+|.==|..=+-..- +..+..--.+-.. +.|-+= +|-+++||.+..+-.++.-+
T Consensus 185 ~v~~g~~~~~~l~----~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lE-lGG~~~--~iV~~dadl~~aa~~i~~~~ 257 (457)
T PRK09406 185 TLLVGSGAVEAIL----RDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLE-LGGSDP--FIVMPSADLDRAAETAVTAR 257 (457)
T ss_pred EEcCCchhHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhcCCceeee-cCCCCe--eEECCCCCHHHHHHHHHHHH
Confidence 3 5654444443 34789976544444222111 0111100001111 235443 34455689998877765322
Q ss_pred CcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC----C--------------H----HHHHHhhc----------
Q 013679 259 EHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R--------------G----EFASKALG---------- 302 (438)
Q Consensus 259 EHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r--------------~----~ia~~sl~---------- 302 (438)
=+.. .+...++... +.. ++..+.+.+.++.+. . . +.++.+.+
T Consensus 258 ~~~~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~ 335 (457)
T PRK09406 258 VQNNGQSCIAAKRFIVHA-DVY-DAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGK 335 (457)
T ss_pred hhCCCCcccCCeEEEEcH-HHH-HHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 2221 1222333322 343 555555555554441 0 1 11111110
Q ss_pred ----------------------------CC---eEEEeCCHHHHHHHhhhhccc-cceecccChH---HHHhhccccccc
Q 013679 303 ----------------------------HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KWESIIENAGSV 347 (438)
Q Consensus 303 ----------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~~i~nAGai 347 (438)
.| .|+.++|++||++++|..--= -..|.++|.. .++.+++ +|.|
T Consensus 336 ~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~-~G~v 414 (457)
T PRK09406 336 RPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLE-AGQV 414 (457)
T ss_pred cCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCC-cceE
Confidence 01 345578999999999976321 1477788875 4677775 7999
Q ss_pred ccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 348 FLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 348 FlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
|++.+.. .++.+|-+ |..|+.|.-+++.|.+..++
T Consensus 415 ~iN~~~~---------~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v 454 (457)
T PRK09406 415 FINGMTV---------SYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454 (457)
T ss_pred EECCCCC---------CCCCCCCCCccccccCccchHHHHHHhhceEEE
Confidence 9996542 22336665 45666666677778776655
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=93.67 E-value=10 Score=40.16 Aligned_cols=82 Identities=9% Similarity=-0.062 Sum_probs=48.5
Q ss_pred EEeCC--HHHHHHHhhhh-ccccceecccChHH---HHhhcccccccccCCC--CcccccccccCCCCCCCCCCccccc-
Q 013679 307 VFARD--MLEGISFSNLY-APEHLIVNVKDAEK---WESIIENAGSVFLGEW--TPESVGDYASGTNHVLPTYGYARMY- 377 (438)
Q Consensus 307 i~v~~--l~ea~~~~N~~-APEHLel~~~~p~~---~l~~i~nAGaiFlG~~--sp~a~GDY~aGpNHvLPT~G~AR~~- 377 (438)
+-++| ++|+++++|.- -+=...|.++|... +..++.++|.|++..+ +....+.-..|.-+ .+|..|-.
T Consensus 350 ~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k---~sG~g~~~~ 426 (442)
T cd07084 350 VEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPA---ADPRGAGIG 426 (442)
T ss_pred EEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCccccccCCCCCC---CCCCCcccc
Confidence 44788 99999999963 22346788888754 6667768899999976 22222222223211 24455554
Q ss_pred cCcccccccceeeE
Q 013679 378 GGVSLDSFLKYMTV 391 (438)
Q Consensus 378 sgLsv~~FlK~~s~ 391 (438)
|..+...|+++.-+
T Consensus 427 g~~~~~~~~~~~~~ 440 (442)
T cd07084 427 GPEAIKLVWRCHAE 440 (442)
T ss_pred chHHhhheeeeeee
Confidence 33444455555433
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=93.62 E-value=11 Score=39.82 Aligned_cols=329 Identities=16% Similarity=0.191 Sum_probs=169.2
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~ 101 (438)
....+-.+..+.+.+.++++.|+=....++...+...+.. ..|+ ....+.+++.++.+++++..+.. ...
T Consensus 18 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~---~~ev------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (432)
T cd07137 18 RSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESF---RDEV------SVLVSSCKLAIKELKKWMAPEKVKTPL 88 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH---HHHH------HHHHHHHHHHHHHHHHHhCCcccCCCc
Confidence 3444455667778888888888776666766554210000 0011 12333455555555554432211 111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCC----
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV---- 176 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv---- 176 (438)
. ..++ ..-.+..|+.-|++..|- -||-. .+...+||-.+|+.=|+= |+. .......+|+-+-..++
T Consensus 89 ~--~~~~-~~~~~r~P~GVv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlK--ps~-~tp~~~~~l~~~~~~~~P~gv 159 (432)
T cd07137 89 T--TFPA-KAEIVSEPLGVVLVISAW---NFPFLLSLEPVIGAIAAGNAVVLK--PSE-LAPATSALLAKLIPEYLDTKA 159 (432)
T ss_pred c--cCCc-eeEEEEecCcEEEEEcCC---chHHHHHHHHHHHHHhcCCEEEEE--CCC-cChHHHHHHHHHHHHhCCcCe
Confidence 0 1122 222367899999999883 46644 345667999999865544 432 11122223332211122
Q ss_pred chhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 177 THILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 177 ~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
=.+. .||.....+|.= +++|+|.==|..=+ .+|+++. . |... +.|-+= +|-+++||.+.+
T Consensus 160 v~~v-~g~~~~~~~L~~-----~~i~~v~fTGs~~~g~~v~~~aa~~~~-~----~~lE-lgG~np--~iV~~dAdl~~a 225 (432)
T cd07137 160 IKVI-EGGVPETTALLE-----QKWDKIFFTGSPRVGRIIMAAAAKHLT-P----VTLE-LGGKCP--VIVDSTVDLKVA 225 (432)
T ss_pred EEEE-eCCHHHHHHHHh-----CCCCEEEEECChHHHHHHHHHHHhcCC-c----EEEE-ccCCCc--EEEcCCCCHHHH
Confidence 2222 256555555551 24777643343322 1222111 0 1111 234443 445566999999
Q ss_pred HHhhhhcc-C-cCC---CCceEEEecCchhhHHHHHHHHHHHHhcC----CC----------H-------HHHH------
Q 013679 251 AADLLSQA-E-HGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSL----PR----------G-------EFAS------ 298 (438)
Q Consensus 251 AaDLLaQA-E-Hd~---~a~~vLvt~s~~la~~~V~~ei~~ql~~l----~r----------~-------~ia~------ 298 (438)
+..++.-+ . +.. .+...++. .++.. +++.+.+.+.++.+ |. + +.++
T Consensus 226 a~~i~~~~f~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga 303 (432)
T cd07137 226 VRRIAGGKWGCNNGQACIAPDYVLV-EESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD 303 (432)
T ss_pred HHHHHHHhhhccCCCcccCCCEEEE-cHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCC
Confidence 88887655 3 333 23334444 33443 55555554444332 10 0 0000
Q ss_pred ---------------------------Hhhc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhh
Q 013679 299 ---------------------------KALG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESI 340 (438)
Q Consensus 299 ---------------------------~sl~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~ 340 (438)
..+. .| .++.++|+|||++++|.. +=. ..|.++|... ++.+
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~-~~gL~a~v~t~d~~~a~~~~~~ 382 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSR-PKPLAAYVFTKNKELKRRIVAE 382 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcC-CCCcEEEEECCCHHHHHHHHHh
Confidence 1111 12 345589999999999987 222 5677888765 5556
Q ss_pred cccccccccCCCCcccc-cc-cccCCCCCCCCCCccccccCcccccccceeeE
Q 013679 341 IENAGSVFLGEWTPESV-GD-YASGTNHVLPTYGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 341 i~nAGaiFlG~~sp~a~-GD-Y~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~ 391 (438)
++ +|.|++...+.... .. -+.|- --+|..|+.|..+++.|++..++
T Consensus 383 l~-~G~v~iN~~~~~~~~~~~PfGG~----k~SG~G~~~g~~~l~~f~~~k~v 430 (432)
T cd07137 383 TS-SGGVTFNDTVVQYAIDTLPFGGV----GESGFGAYHGKFSFDAFSHKKAV 430 (432)
T ss_pred CC-cCcEEECCccccccCCCCCCCCc----CcCcCCccccHHHHHHhccCcee
Confidence 65 79999996442110 00 11222 24667888888888889887665
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=93.53 E-value=13 Score=40.33 Aligned_cols=249 Identities=16% Similarity=0.147 Sum_probs=136.9
Q ss_pred EEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH--------HHHHHHcCCc-hhhh
Q 013679 112 KRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKKAGVT-HILK 181 (438)
Q Consensus 112 g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--------L~AA~l~Gv~-eIy~ 181 (438)
-.++.|+.-|++..| .-|| +..++.++||-.||..=|+=.+| ..|.+ -.+...+|+. .++.
T Consensus 149 ~~~~~P~GVV~~I~P---wN~P~~~~~~~~~~ALaaGN~VVlKPs~------~tp~~~~~~~~l~~~~~~~aGlP~gvv~ 219 (508)
T PLN02315 149 MEVWNPLGIVGVITA---FNFPCAVLGWNACIALVCGNCVVWKGAP------TTPLITIAMTKLVAEVLEKNNLPGAIFT 219 (508)
T ss_pred EEEEecceEEEEECC---CcchHHHHHHHHhHHHHcCCEEEeeCCC------cChHHHHHHHHHHHHHHHHcCCCcccEE
Confidence 346789999999999 4588 56677888999999875544333 23332 2234555543 2222
Q ss_pred --cchHHHHHHHhhcCCCCCCceEEecCCcHH----HHH--HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 182 --AGGAQAISAMAWGTESCPKVEKIFGPGNQY----VTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 182 --vGGAQAIAAlAyGTetIp~VDkIvGPGN~y----V~~--AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
.||...-.+|. .-|+||+|.==|..- |.. |+++. . |-..+ .|-+ -+|-+++||.+..+-.
T Consensus 220 ~v~g~~~~~~~l~----~~~~v~~v~fTGS~~~G~~v~~~aa~~~~-~----~~lEl-gGkn--p~iV~~dADl~~Aa~~ 287 (508)
T PLN02315 220 SFCGGAEIGEAIA----KDTRIPLVSFTGSSKVGLMVQQTVNARFG-K----CLLEL-SGNN--AIIVMDDADIQLAVRS 287 (508)
T ss_pred EecCChHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcCC-C----EEEec-CCCC--eEEECCCCCHHHHHHH
Confidence 24544333332 247888886555543 222 32211 1 22222 3333 2444456888886655
Q ss_pred hhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------CH---H----HHHHhh------
Q 013679 254 LLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------RG---E----FASKAL------ 301 (438)
Q Consensus 254 LLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r~---~----ia~~sl------ 301 (438)
++-=+=. --.+...++. .++.. +++.+.+.+.++.+. +. + .++.+.
T Consensus 288 i~~~~f~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v 365 (508)
T PLN02315 288 VLFAAVGTAGQRCTTCRRLLL-HESIY-DDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKI 365 (508)
T ss_pred HHHHHHHhcCCCCCCCeEEEE-eHHHH-HHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 4422111 1122223333 23343 666666655554441 01 0 011111
Q ss_pred ----------------------------c---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChHHHHhhc----
Q 013679 302 ----------------------------G---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAEKWESII---- 341 (438)
Q Consensus 302 ----------------------------~---~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~~~l~~i---- 341 (438)
. .| .|+-++|+|||++++|.. |-+| .+.++|......-+
T Consensus 366 l~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~-~~gL~a~Vft~d~~~a~~~~~~~~ 444 (508)
T PLN02315 366 LTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSV-PQGLSSSIFTRNPETIFKWIGPLG 444 (508)
T ss_pred EECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHhhhcc
Confidence 0 12 234479999999999976 3344 77788886554433
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
-.+|.|++...+. +...-+|- +|..|+.|.-+++.|++..++.
T Consensus 445 l~~G~v~iN~~~~--------~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~ 492 (508)
T PLN02315 445 SDCGIVNVNIPTN--------GAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCT 492 (508)
T ss_pred cceeEEEEcCCCC--------CCCCCCCCCccccccCCccchHHHHHHHhhEEEEE
Confidence 3689999996432 11111354 4677888888899999988854
|
|
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=93.05 E-value=14 Score=39.29 Aligned_cols=255 Identities=16% Similarity=0.150 Sum_probs=134.4
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
+...-.++.|+.-|++..|-- ||- ..++..+||-.+|..=|+-.+|-. ..... +......+|.. .++.+
T Consensus 115 ~~~~~~~~~P~GvV~~i~p~N---~P~~~~~~~~~~ALaaGN~Vv~Kps~~~---p~~~~~l~~~~~~aGlP~g~v~~v~ 188 (462)
T cd07112 115 DALALITREPLGVVGAVVPWN---FPLLMAAWKIAPALAAGNSVVLKPAEQS---PLTALRLAELALEAGLPAGVLNVVP 188 (462)
T ss_pred CeEEEEEEeeeeeEEEECCCc---hHHHHHHHHHHHHHHcCCeeeeeCCCCC---CHHHHHHHHHHHhcCCCCCcEEEEe
Confidence 333335788999999999953 554 356678899999987555433321 11112 22334455543 11111
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
| |.+.-..| -+-|.||+|+==|..= ..+|++.+- .|-+-+ |-.--+||-|+.+|.+.+|.+++
T Consensus 189 g~~~~~~~~l----~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~----~~~lel--gG~n~~iV~~da~dl~~aa~~i~ 258 (462)
T cd07112 189 GFGHTAGEAL----GLHMDVDALAFTGSTEVGRRFLEYSGQSNLK----RVWLEC--GGKSPNIVFADAPDLDAAAEAAA 258 (462)
T ss_pred CCCchHHHHH----hcCCCcCEEEEECCHHHHHHHHHHHHHhcCC----EEEecC--CCCCeEEECCCCcCHHHHHHHHH
Confidence 2 33333333 1248899886666542 222221111 122222 33334455554449998887776
Q ss_pred hccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC-------------------H---HHHHHhhcC------
Q 013679 256 SQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR-------------------G---EFASKALGH------ 303 (438)
Q Consensus 256 aQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r-------------------~---~ia~~sl~~------ 303 (438)
.-+=+. -.+...++. .++.. ++..+.+.++++.+.- . +.+.++.++
T Consensus 259 ~~~~~~~GQ~C~a~~~v~V-~~~v~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~ 336 (462)
T cd07112 259 AGIFWNQGEVCSAGSRLLV-HESIK-DEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVA 336 (462)
T ss_pred HHHHhccCCCCCCCeeEEE-cHHHH-HHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 432221 123223333 33343 6666666666654410 0 111111100
Q ss_pred ----------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhc
Q 013679 304 ----------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESII 341 (438)
Q Consensus 304 ----------------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i 341 (438)
| .++-++|.|||++++|.- |-. ..|.+.|.. .+..++
T Consensus 337 gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gL~~~i~t~d~~~~~~~~~~l 415 (462)
T cd07112 337 GGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDS-VYGLAASVWTSDLSRAHRVARRL 415 (462)
T ss_pred CCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCC-CccceEEEEcCCHHHHHHHHHhc
Confidence 1 244578899999999986 433 456677764 366666
Q ss_pred ccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 391 (438)
+ +|.|++...+. .+..+|-+| ..|+.|.-++..|.+..++
T Consensus 416 ~-~g~v~iN~~~~---------~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i 460 (462)
T cd07112 416 R-AGTVWVNCFDE---------GDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460 (462)
T ss_pred C-cceEEECCCCC---------CCCCCCCCCcccccCCccchHHHHHHHhceeEE
Confidence 4 89999996421 122467665 4555555556666665544
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=93.03 E-value=14 Score=39.32 Aligned_cols=261 Identities=17% Similarity=0.172 Sum_probs=137.0
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc-hhhhc-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILKA- 182 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~-eIy~v- 182 (438)
+|...-.+.+|+.-|++..|- -||... +...+||-.+|..=|+- |.. ........ ......+|+. .++.+
T Consensus 126 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~i~~ALaaGN~VvlK--ps~-~tp~~~~~l~~~l~~aGlP~gvv~~v 199 (478)
T cd07085 126 RGIDTYSYRQPLGVVAGITPF---NFPAMIPLWMFPMAIACGNTFVLK--PSE-RVPGAAMRLAELLQEAGLPDGVLNVV 199 (478)
T ss_pred CCceeEEEEecceEEEEECCC---ChHHHHHHHHHHHHHhcCCEEEEE--CCC-cCcHHHHHHHHHHHHhCCCCCcEEEE
Confidence 344456788999999999995 466433 55678999999865544 432 11122222 2344556654 33333
Q ss_pred -chHHHHHHHhhcCCCCCCceEEecCCcHHHHH--HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccC
Q 013679 183 -GGAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAE 259 (438)
Q Consensus 183 -GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE 259 (438)
|+.....+|. .-|.||+|.=-|..=+-. +|+ ... ++.--+=-+-|.+=+ |-+++||.+.++..++.-+=
T Consensus 200 ~g~~~~~~~L~----~~~~v~~V~fTGs~~~g~~i~~~-aa~-~~~~~~lElgGk~p~--iV~~dADl~~aa~~i~~~~~ 271 (478)
T cd07085 200 HGGKEAVNALL----DHPDIKAVSFVGSTPVGEYIYER-AAA-NGKRVQALGGAKNHA--VVMPDADLEQTANALVGAAF 271 (478)
T ss_pred ecCHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHH-Hhh-cCCcEEecCCCCCce--EECCCCCHHHHHHHHHHHHH
Confidence 4433222222 246799887666543321 111 110 000001113344433 33456999988877763332
Q ss_pred cC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC------------------HH----HHHH--------------
Q 013679 260 HG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------------------GE----FASK-------------- 299 (438)
Q Consensus 260 Hd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------------------~~----ia~~-------------- 299 (438)
.. -.+...++... ++. +++.+.+.+.++.+.- .+ .+.+
T Consensus 272 ~~~GQ~C~a~~rv~V~~-~i~-~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~ 349 (478)
T cd07085 272 GAAGQRCMALSVAVAVG-DEA-DEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRG 349 (478)
T ss_pred hcCCCCCCCCeEEEEeH-HHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 22 22333333332 243 6666555555543310 00 0000
Q ss_pred -------------------------hhc---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhcccc
Q 013679 300 -------------------------ALG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENA 344 (438)
Q Consensus 300 -------------------------sl~---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~nA 344 (438)
-+. .| .|+-++|+|||++++|.-- +-...|.++|... ++.+++ +
T Consensus 350 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~-~ 428 (478)
T cd07085 350 VKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVD-A 428 (478)
T ss_pred CCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC-c
Confidence 011 12 3445899999999999743 2236888989754 556654 9
Q ss_pred cccccCCCCcccccccccCCCCCCCCCC-----ccc--cccCcccccccceeeEE
Q 013679 345 GSVFLGEWTPESVGDYASGTNHVLPTYG-----YAR--MYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 345 GaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR--~~sgLsv~~FlK~~s~~ 392 (438)
|.|++..++.. ...-+|-+| ..| ..|.-+++.|++..++.
T Consensus 429 G~v~iN~~~~~--------~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~ 475 (478)
T cd07085 429 GMVGINVPIPV--------PLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVT 475 (478)
T ss_pred ceEEEcCCCCC--------CCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEE
Confidence 99999975431 112356554 342 33444667787766654
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=92.91 E-value=15 Score=39.16 Aligned_cols=287 Identities=18% Similarity=0.206 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHH--hccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCC
Q 013679 81 AFDVAYNNIYAFHL--AQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 81 ai~~A~~nI~~fh~--~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
-+..+++.++.|-. .++.........+|...-..+.|+.-|++..|= -|| +++++.++||-.+|..=|+- |+
T Consensus 97 ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~---N~Pl~~~~~~i~~ALaaGN~VIlK--ps 171 (473)
T cd07097 97 EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPW---NFPIAIPAWKIAPALAYGNTVVFK--PA 171 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEccc---ChHHHHHHHHHHHHHHcCCEEEEe--CC
Confidence 34556666654432 122222111112355555677999999999994 466 44556788999999875543 43
Q ss_pred CCCCCCCHH-HHHHHHHcCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcccccCC
Q 013679 158 SQDGSICKE-VLYCAKKAGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMISIDMP 231 (438)
Q Consensus 158 ~~~G~i~p~-iL~AA~l~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~VgID~~ 231 (438)
. ....... +..+...+|..+ ++.+ | |...-.+|. +-|+||+|.==|..-+-.+ .+........|-..+
T Consensus 172 ~-~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lEl- 245 (473)
T cd07097 172 E-LTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALV----EHPDVDAVSFTGSTAVGRRIAAAAAARGARVQLEM- 245 (473)
T ss_pred C-CCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhccCCcEEEEC-
Confidence 2 1112222 223444555542 2222 2 332222221 1378888765555443222 111110000132332
Q ss_pred CCCceEEEEecCCCCHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------
Q 013679 232 AGPSEVLVIADIYASPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------- 292 (438)
Q Consensus 232 AGPSEvlIiAD~~Anp~~vAaDLLaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------------- 292 (438)
-|.+=++ -+++||.+.+|-.++.= +=..-.+...++.. ++.. +++.+.+.++++.+.
T Consensus 246 GGk~~~i--V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli 321 (473)
T cd07097 246 GGKNPLV--VLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVT-EGIH-DRFVEALVERTKALKVGDALDEGVDIGPVV 321 (473)
T ss_pred CCCCeeE--ECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEe-hhHH-HHHHHHHHHHHHhCCCCCCCCCCCcCCCCC
Confidence 3655443 44568888877666432 22222333333333 3343 666666655554432
Q ss_pred CH-------HHHHHhh--------------------------------------c--CC---eEEEeCCHHHHHHHhhhh
Q 013679 293 RG-------EFASKAL--------------------------------------G--HS---FMVFARDMLEGISFSNLY 322 (438)
Q Consensus 293 r~-------~ia~~sl--------------------------------------~--~g---~ii~v~~l~ea~~~~N~~ 322 (438)
++ +.++++. + .| .++.++|+|||++++|..
T Consensus 322 ~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 401 (473)
T cd07097 322 SERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDT 401 (473)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCC
Confidence 00 0001110 0 01 234478999999999976
Q ss_pred cccc-ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCCc-----c-ccccCcccccccceeeE
Q 013679 323 APEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGY-----A-RMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 323 APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~-----A-R~~sgLsv~~FlK~~s~ 391 (438)
--=| ..|.++|... ++.++ ++|.+|+...+. +..+-+|-+|. . |+.|.-++..|++.-++
T Consensus 402 ~~gL~~~v~t~d~~~a~~~~~~l-~~g~v~iN~~~~--------~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v 471 (473)
T cd07097 402 EFGLSAGIVTTSLKHATHFKRRV-EAGVVMVNLPTA--------GVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471 (473)
T ss_pred CCCceEEEECCCHHHHHHHHHhC-CcCeEEECCCCC--------CCCCCCCCCCcccccCcccCCcHHHHHHhhceeEE
Confidence 3222 5677888754 55565 499999996432 22234677664 4 55555577778876665
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=92.74 E-value=17 Score=39.36 Aligned_cols=286 Identities=15% Similarity=0.203 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhh-cccceecCCCeEEEecCCCCCCC
Q 013679 84 VAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALML-SVPAQIAGCKTVVLATPPSQDGS 162 (438)
Q Consensus 84 ~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~-aiPAkvAGV~~Iv~~TPP~~~G~ 162 (438)
.+.+++..+.+..+.-. .+...+|...-.+..|+.=|++..| ..+|-...+. ++||-.+|..=|+ -|.. .-.
T Consensus 72 ~~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~PlGVV~~I~P---~n~P~~~~~~k~~~AL~aGNaVIl--Kps~-~a~ 144 (488)
T TIGR02518 72 FAATIVYDSIKDMKTIG-ILSEDKEKKVIEIAVPVGVVAGLIP---STNPTSTAIYKTLISIKARNAIVF--SPHP-NAK 144 (488)
T ss_pred HHHHHHHHHHhhCcccc-eecCCCCcceEEEEecceEEEEEcc---cCChHHHHHHHHHHHHHcCCcEEE--ECCc-cch
Confidence 35566666654332211 2233446666788899999999999 5788655555 8899999876444 3432 111
Q ss_pred CCHH-----HHHHHHHcCCc-hhhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcH-HHHHHHHHhcCCCCcccccCCC
Q 013679 163 ICKE-----VLYCAKKAGVT-HILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQ-YVTAAKMILQNSEAMISIDMPA 232 (438)
Q Consensus 163 i~p~-----iL~AA~l~Gv~-eIy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~-yV~~AK~~v~~~~~~VgID~~A 232 (438)
.... +-.++..+|+- .++. -| |.....+|- .-|+||+|.==|.. .+.+|-.- +. --|=...
T Consensus 145 ~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~----~~~~vd~V~fTGs~~v~~~a~~~-~~----pv~~e~g 215 (488)
T TIGR02518 145 KCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELM----KNKDTSLILATGGEAMVKAAYSS-GT----PAIGVGP 215 (488)
T ss_pred HHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHc-CC----CEEEEcC
Confidence 1111 22344567752 3333 12 444444443 24778888754443 23333111 11 1122223
Q ss_pred CCceEEEEecCCCCHHHHHHhhhhccCcCC----C-CceEEEecCchhhHHHHHHHHHHH-------Hhc------C--C
Q 013679 233 GPSEVLVIADIYASPVHIAADLLSQAEHGP----D-SQVVLVIVGDGVDLDAIEQEISKQ-------CQS------L--P 292 (438)
Q Consensus 233 GPSEvlIiAD~~Anp~~vAaDLLaQAEHd~----~-a~~vLvt~s~~la~~~V~~ei~~q-------l~~------l--~ 292 (438)
|-. -+|-|++||.+..+-.++.-+=.+. . .+.++|- ++.. +++.+.+.++ .+. + +
T Consensus 216 Gn~--p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~--~~i~-d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~ 290 (488)
T TIGR02518 216 GNG--PAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVE--ECNK-DAVVEELKKQGGYFLTAEEAEKLGKFILRP 290 (488)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEe--HHHH-HHHHHHHHHhhhhhcCHHHHHhhcccccCC
Confidence 333 3556777999998877764333221 1 2345553 3343 6555555554 111 1 1
Q ss_pred CH----HHHH-----------H--------------------hh--c-CC---eEEEeCCHHHHHHHhhhh---cccc--
Q 013679 293 RG----EFAS-----------K--------------------AL--G-HS---FMVFARDMLEGISFSNLY---APEH-- 326 (438)
Q Consensus 293 r~----~ia~-----------~--------------------sl--~-~g---~ii~v~~l~ea~~~~N~~---APEH-- 326 (438)
.. .+.. . -| + .| .++.++|+|||++++|.. -+-+
T Consensus 291 ~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glt 370 (488)
T TIGR02518 291 NGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQNGVGNKNPYSREKLTTILAFYTEENWHEACELSIELLQNEGAGHT 370 (488)
T ss_pred CCCcCcccccchHHHHHHHhccccCCCCEEEEeCCCCCCCCCccccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCe
Confidence 00 0100 0 01 1 13 456699999999999983 3444
Q ss_pred ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccc--cccCcccccccceeeEEEe
Q 013679 327 LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYAR--MYGGVSLDSFLKYMTVQSL 394 (438)
Q Consensus 327 Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR--~~sgLsv~~FlK~~s~~~~ 394 (438)
-.|.++|... +..++ .+|.||+.. |.+.|-=-+-+| .-| .+++-. ....++..+|+....+.+-
T Consensus 371 a~I~T~d~~~a~~f~~~i-~ag~V~VN~--~~~~~~~Ga~t~-~~~~~~~G~G~~~g~st~~~v~~~~l~~~k~v~~~ 444 (488)
T TIGR02518 371 LIIHSENKDIVREFALKK-PVSRMLVNT--GGSLGGIGATTN-LVPAFTLGCGAVGGSSTSDNITPENLINIRRVAYG 444 (488)
T ss_pred EEEEeCCHHHHHHHHHhC-CeeEEEEcC--CCcccccccccC-CCccccccccccCCCcCCCCCCHHHhheeeEEEec
Confidence 4678888754 44455 589999995 443333333444 333 111111 1136777777776666543
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=92.11 E-value=20 Score=38.81 Aligned_cols=265 Identities=19% Similarity=0.217 Sum_probs=135.0
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-hhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH-ILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e-Iy~v-- 182 (438)
|.....++.|+.-|+++.| .-||-. .+..++||-.||.. |++-|+... ..... +..+...+|..+ ++.+
T Consensus 158 g~~~~~~~~P~GVV~~I~p---~N~P~~~~~~~i~~ALaaGN~--VVlKps~~t-p~~~~~l~~ll~eaGlP~gvv~vv~ 231 (518)
T cd07125 158 GELNGLELHGRGVFVCISP---WNFPLAIFTGQIAAALAAGNT--VIAKPAEQT-PLIAARAVELLHEAGVPRDVLQLVP 231 (518)
T ss_pred CceeEEEEecccEEEEECC---cchHHHHHHHHHHHHHHcCCE--EEEeCCCcC-cHHHHHHHHHHHHcCCCCCcEEEEe
Confidence 4445677899999999987 557654 46678899999997 334444211 11122 223445566542 2211
Q ss_pred c-hHHHHHHHhhcCCCCCCceEE--ecCCcHHHHHHHHHhc--CCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhc
Q 013679 183 G-GAQAISAMAWGTESCPKVEKI--FGPGNQYVTAAKMILQ--NSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 257 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkI--vGPGN~yV~~AK~~v~--~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ 257 (438)
| |...-.+|. +-|.||+| +|.-..--..+|..-. +. -.--+=-+.|-+= +|-|++||.+..|-.++.-
T Consensus 232 g~~~~~~~~L~----~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~-~~~v~lElgGk~p--~iV~~dADl~~Aa~~iv~g 304 (518)
T cd07125 232 GDGEEIGEALV----AHPRIDGVIFTGSTETAKLINRALAERDGP-ILPLIAETGGKNA--MIVDSTALPEQAVKDVVQS 304 (518)
T ss_pred cCchhhHHHHh----cCCCcCEEEEECCHHHHHHHHHHhhhccCC-CceEEEEcCCCCe--EEECCCCCHHHHHHHHHHH
Confidence 2 222222332 23789998 5533221111121110 00 0000111234443 4445568988877665532
Q ss_pred cCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C---HHHHHHh---------------
Q 013679 258 AEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R---GEFASKA--------------- 300 (438)
Q Consensus 258 AEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r---~~ia~~s--------------- 300 (438)
+=. --.|...++.. ++.. +++.+.+.+.++.+. . .+.+++.
T Consensus 305 ~f~nsGQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~ 382 (518)
T cd07125 305 AFGSAGQRCSALRLLYLQ-EEIA-ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAP 382 (518)
T ss_pred HHhcCCCCCCCCeEEEEc-chhH-HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCC
Confidence 111 12233333332 3343 666666665555431 0 1111111
Q ss_pred ---------------------hc---CC---eEEEeC--CHHHHHHHhhhhcccc--ceecccChHH---HHhhcccccc
Q 013679 301 ---------------------LG---HS---FMVFAR--DMLEGISFSNLYAPEH--LIVNVKDAEK---WESIIENAGS 346 (438)
Q Consensus 301 ---------------------l~---~g---~ii~v~--~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~nAGa 346 (438)
+. .| .|+.++ |+|||++++|.. +-. ..|.++|... +..+++ +|.
T Consensus 383 ~~~~~g~~~~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~-~~gLta~Vft~d~~~~~~~~~~l~-~G~ 460 (518)
T cd07125 383 LDDGNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINAT-GYGLTLGIHSRDEREIEYWRERVE-AGN 460 (518)
T ss_pred cCCCCCeEEccEEEeecCChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCC-CCCceEEEEeCCHHHHHHHHHhCC-cCe
Confidence 11 12 345689 999999999987 333 5677888753 555664 899
Q ss_pred cccCCCCcccccccccCCCCCCCCC-----Ccccc-ccCcccccccceeeE-EEeCH
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPTY-----GYARM-YGGVSLDSFLKYMTV-QSLTE 396 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~-~sgLsv~~FlK~~s~-~~~s~ 396 (438)
|++...+.-. .+.-+|-+ |..|+ -|.-++..|++..++ +.+|.
T Consensus 461 V~IN~~~~~~-------~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~~~ 510 (518)
T cd07125 461 LYINRNITGA-------IVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNTTA 510 (518)
T ss_pred EEECCCCCCC-------CCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEccc
Confidence 9999753211 11124544 44543 334456778876664 34444
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=91.99 E-value=20 Score=38.45 Aligned_cols=284 Identities=16% Similarity=0.157 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHhccCC-CceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSA-ETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~-~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
-+..++++++.|-+.-... ........|.....++.|+.-|++..|= -||-.. ++..+||-.||..=|+- |..
T Consensus 99 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~i~~ALaaGN~VV~K--Ps~ 173 (480)
T cd07559 99 DIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPW---NFPLLMAAWKLAPALAAGNTVVLK--PAS 173 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--Cch
Confidence 3556666666554321111 1111112344556778999999999994 466444 55678999999875554 432
Q ss_pred CCCCCCHHHH-HHHHHc------CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCc
Q 013679 159 QDGSICKEVL-YCAKKA------GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAM 225 (438)
Q Consensus 159 ~~G~i~p~iL-~AA~l~------Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~ 225 (438)
-.|..- ..++++ |+=.+..-.|...-.+|. +-|+||+|.==|..=+- +|+++. .
T Consensus 174 ----~tp~~~~~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~~-p---- 240 (480)
T cd07559 174 ----QTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKPLA----SHPRIAKLAFTGSTTVGRLIMQYAAENLI-P---- 240 (480)
T ss_pred ----hhhHHHHHHHHHHHHhCCcCeEEEEecCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhccCC-c----
Confidence 122211 111221 111112111333223331 24788888766665442 222211 0
Q ss_pred ccccCCCCCceEEEEecC---CCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC-----
Q 013679 226 ISIDMPAGPSEVLVIADI---YASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----- 293 (438)
Q Consensus 226 VgID~~AGPSEvlIiAD~---~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----- 293 (438)
|-.- +-|-+=.+|..|. ++|.+..|-+++.=+=. .-.+...++. .++.. +++.+.+.+.++.+.-
T Consensus 241 ~~lE-lGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 241 VTLE-LGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALV-QESIY-DEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred EEec-cCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 1111 4466666666542 23888877666521111 1122223333 33343 6666666555544320
Q ss_pred -----------------HHHHHHhhc------------------------------------------CC---eEEEeCC
Q 013679 294 -----------------GEFASKALG------------------------------------------HS---FMVFARD 311 (438)
Q Consensus 294 -----------------~~ia~~sl~------------------------------------------~g---~ii~v~~ 311 (438)
.+.+..+.+ .| .++.++|
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 397 (480)
T cd07559 318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD 397 (480)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence 111121110 01 3455788
Q ss_pred HHHHHHHhhhhcccc--ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCccccccc
Q 013679 312 MLEGISFSNLYAPEH--LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFL 386 (438)
Q Consensus 312 l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~Fl 386 (438)
.|||++++|.. |-. ..|.++|... +.+++ ++|.|++..+.....+=-+.|- -.+|..|+.+.-+++.|+
T Consensus 398 ~~eai~~~n~~-~~gL~~~v~t~d~~~a~~~a~~l-~~G~v~iN~~~~~~~~~PfGG~----k~SG~G~~~g~~~~~~~~ 471 (480)
T cd07559 398 EEEAIAIANDT-EYGLGGGVWTRDINRALRVARGI-QTGRVWVNCYHQYPAHAPFGGY----KKSGIGRETHKMMLDHYQ 471 (480)
T ss_pred HHHHHHHHhCC-CCCCeEEEECCCHHHHHHHHHhc-CcceEEECCCCCCCCCCCcCCC----ccCcCCccChHHHHHHhh
Confidence 99999999975 333 4788888754 56666 5999999964322111111121 235667777777888888
Q ss_pred ceeeE
Q 013679 387 KYMTV 391 (438)
Q Consensus 387 K~~s~ 391 (438)
+..++
T Consensus 472 ~~k~v 476 (480)
T cd07559 472 QTKNI 476 (480)
T ss_pred ceEEE
Confidence 86664
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=91.44 E-value=22 Score=40.44 Aligned_cols=331 Identities=11% Similarity=0.078 Sum_probs=161.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 103 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~ 103 (438)
+.++-.+.++.+.+.++++-|+=+.+..+-|....-+ ..++..+.+-.+ +++-|+.++++++.|.+...+.....
T Consensus 306 ~~~~R~~~L~~la~~l~~~~eei~~e~gkdl~~a~~~--~~~~~~~~el~~---~~~ei~~~~~~l~~~a~~~~~~g~~~ 380 (715)
T TIGR01092 306 SSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGA--GYAASLVARLSM---SPSKISSLAISLRQLAAMEDPIGRVL 380 (715)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhc--CcchhHHHHHhC---CHHHHHHHHHHHHHHhcCCCcccccc
Confidence 3445556677777777777766554444433211000 000000110011 12236678888888876322211111
Q ss_pred ---EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---H-HHHHHc--
Q 013679 104 ---ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---L-YCAKKA-- 174 (438)
Q Consensus 104 ---~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L-~AA~l~-- 174 (438)
....+.....++.|+.-|++..|- . |-..++-++||-.||+.=|+ -|.. ..|.+ | ...+.+
T Consensus 381 ~~~~~~~~~~~~~~~~P~GVV~~I~Pw-N---P~~~~~~~~~ALaaGN~vvl--Kpse----~tp~t~~~l~~l~~~alp 450 (715)
T TIGR01092 381 KRTRIADNLILEKTSVPIGVLLIVFES-R---PDALVQIASLAIRSGNGLLL--KGGK----EAARSNAILHKVITEAIP 450 (715)
T ss_pred cccccCCCceeEEEEeeceEEEEEeCC-C---hHHHHHHHHHHHHhCCEEEE--cCcc----cchHHHHHHHHHHHHHcC
Confidence 112244456789999999999997 3 33336789999999986444 4431 22321 1 111222
Q ss_pred -CC-chhhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHH-HhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 175 -GV-THILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 175 -Gv-~eIy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~-~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
|+ +.++.+ |+...-..|. .-|+||+|+==|+.=|-..=. .-.. .|.. -+.|=+= +|-|++||.+.
T Consensus 451 ~g~~~~~~~~v~~~~~~~~~l~----~~~~vd~I~fTGS~~vG~~i~~~A~~---pv~l-ElgGk~p--~iV~~dADl~~ 520 (715)
T TIGR01092 451 IHVGKKLIGLVTSREEIPDLLK----LDDVIDLVIPRGSNKLVSQIKKSTKI---PVLG-HADGICH--VYVDKSASVDM 520 (715)
T ss_pred CCCCCcEEEEeCChHHHHHHHh----cCCCccEEEEcCCHHHHHHHHHhCCC---CEEE-EcCCcce--EEECCCCCHHH
Confidence 21 012221 5443323332 357899998666654321100 0011 0100 0122222 45567788888
Q ss_pred HHHhhhhccCcCC---CCc-eEEEecCchhhHHH--HHHHHHHHHh------cCCCHH-HH------HHhhc---CC---
Q 013679 250 IAADLLSQAEHGP---DSQ-VVLVIVGDGVDLDA--IEQEISKQCQ------SLPRGE-FA------SKALG---HS--- 304 (438)
Q Consensus 250 vAaDLLaQAEHd~---~a~-~vLvt~s~~la~~~--V~~ei~~ql~------~l~r~~-ia------~~sl~---~g--- 304 (438)
++.-++.=+=+.. .|. -++|-.+ +. ++ +.+.++...+ .-.+.+ .. .+-+. .|
T Consensus 521 A~~~i~~~~~~~GQ~C~a~~rvlV~~~--i~-d~~~~~~~v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl 597 (715)
T TIGR01092 521 AKRIVRDAKCDYPAACNAMETLLVHKD--LL-RNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLAC 597 (715)
T ss_pred HHHHHHHHhCCCCCccccCcEEEEehh--hc-cchhHHHHHHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceE
Confidence 7544443322211 111 2333222 22 32 3332222110 001100 00 11222 24
Q ss_pred eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCC-----ccc
Q 013679 305 FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YAR 375 (438)
Q Consensus 305 ~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR 375 (438)
.++-++|+|||++++|..--=| ..|.++|... ++.+++ +|.|++..++.. .+-+|-+| ..|
T Consensus 598 ~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~-sG~V~vN~~~~~---------~~~~pfGG~k~SG~g~ 667 (715)
T TIGR01092 598 TVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVD-SAAVFHNASTRF---------SDGFRFGLGAEVGIST 667 (715)
T ss_pred EEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCC-eeEEEEeCCCCC---------CCCCCCcCcccccccc
Confidence 4566899999999999974333 7788888764 555654 899999965311 12245554 442
Q ss_pred ----cccCcccccccceeeEE
Q 013679 376 ----MYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 376 ----~~sgLsv~~FlK~~s~~ 392 (438)
..+..++++|+...++.
T Consensus 668 ~~~~~~g~~~l~~~~~~k~v~ 688 (715)
T TIGR01092 668 SRIHARGPVGVEGLLTTRWLL 688 (715)
T ss_pred CCCCCCChhHHHHhceEEEEE
Confidence 24667788888766654
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=91.04 E-value=23 Score=37.41 Aligned_cols=327 Identities=17% Similarity=0.169 Sum_probs=162.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-cCCCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ-KSAETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q-~~~~~~ 102 (438)
...+-.+.++.+.+.++++.|+-..-.+..-.+.. ...+. .|+ ....+.++.++..++.+-..+ .+.+.
T Consensus 18 ~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~-~ea~~--~ev------~~~~~~~~~~~~~~~~~~~~~~~~~~~- 87 (433)
T cd07134 18 TAAERIAKLKRLKKAILARREEIIAALAADFRKPA-AEVDL--TEI------LPVLSEINHAIKHLKKWMKPKRVRTPL- 87 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHH--HHH------HHHHHHHHHHHHHHHHHhCCcccCCcc-
Confidence 34444556667777777777766555555433211 00000 000 012233334444333321111 11110
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHHHH-HHHHc---CCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAKKA---GVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-AA~l~---Gv~ 177 (438)
...|...-.++.|+.-|+++.|- -||-.. +...+||-.+|..=|+-.+|-. ......++ ..+.+ |+=
T Consensus 88 --~~~~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~---p~~~~~~~~~~~~a~p~g~v 159 (433)
T cd07134 88 --LLFGTKSKIRYEPKGVCLIISPW---NYPFNLAFGPLVSAIAAGNTAILKPSELT---PHTSAVIAKIIREAFDEDEV 159 (433)
T ss_pred --ccCCCceEEEEecCCEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEECCccC---HHHHHHHHHHHHHhCCcCEE
Confidence 11244445789999999999994 466544 4457799999987655433321 11222221 22222 222
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHH
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 251 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vA 251 (438)
.+. .|+...-.+|. . .+||+|+=-|..=+- +|+++. . +-.. +.|-+ .+|-|++||.+.++
T Consensus 160 ~~v-~g~~~~~~~l~---~--~~v~~v~ftGs~~~g~~i~~~aa~~~~-~----~~le-lgG~~--~~iV~~dAD~~~aa 225 (433)
T cd07134 160 AVF-EGDAEVAQALL---E--LPFDHIFFTGSPAVGKIVMAAAAKHLA-S----VTLE-LGGKS--PTIVDETADLKKAA 225 (433)
T ss_pred EEE-eCChhHHHHHH---h--CCCCEEEEECChHHHHHHHHHHHhcCC-c----EEEE-ccCCC--cEEECCCCCHHHHH
Confidence 222 24443333333 1 238888655544322 222221 0 2222 23444 34555679999988
Q ss_pred HhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC--------C---------------HHHHHHhhcC-
Q 013679 252 ADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------R---------------GEFASKALGH- 303 (438)
Q Consensus 252 aDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------r---------------~~ia~~sl~~- 303 (438)
-.++.-+=.+ ..+...++.. ++.. ++..+.+.++++.+. . .+.++++...
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~-~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 303 (433)
T cd07134 226 KKIAWGKFLNAGQTCIAPDYVFVH-ESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKG 303 (433)
T ss_pred HHHHHHhhcCcCCcccCCcEEEEC-HHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCC
Confidence 8886533322 2233334443 3343 555555555544321 0 1112222211
Q ss_pred ------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhh
Q 013679 304 ------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESI 340 (438)
Q Consensus 304 ------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~ 340 (438)
| .++.++|.||+++++|..---| -.|.++|... +..+
T Consensus 304 a~~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 383 (433)
T cd07134 304 AKVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLAR 383 (433)
T ss_pred CEEEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHh
Confidence 1 3455889999999999853222 4567788754 4455
Q ss_pred cccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 341 IENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 341 i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+ .+|.||++..+... .+-.+|- +|..|..+.-++..|++.-++.
T Consensus 384 l-~~g~v~iN~~~~~~-------~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 384 T-SSGGVVVNDVVLHF-------LNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred C-CcceEEECCccccc-------CCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 5 48999999754211 1122444 4567777777778888766553
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=90.80 E-value=26 Score=37.49 Aligned_cols=282 Identities=17% Similarity=0.155 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHhccCCCce-EEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCC
Q 013679 82 FDVAYNNIYAFHLAQKSAETS-VENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQ 159 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~~~~~-~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~ 159 (438)
+..++++++.|.+.-...... ....++.....++.|+.-|++..|= -||-. .++.++||-.||..=|+- |+.
T Consensus 100 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV~K--Ps~- 173 (479)
T cd07116 100 IPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPW---NFPLLMATWKLAPALAAGNCVVLK--PAE- 173 (479)
T ss_pred HHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCC-
Confidence 566677776664321111111 1223454556788999999999994 57744 446788999999864443 442
Q ss_pred CCCCCHHHH-HHHHHc------CCchhhhcc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHH--HHHHhcCCCCccccc
Q 013679 160 DGSICKEVL-YCAKKA------GVTHILKAG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTA--AKMILQNSEAMISID 229 (438)
Q Consensus 160 ~G~i~p~iL-~AA~l~------Gv~eIy~vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~~~~~~VgID 229 (438)
..|..- .-++++ |+=.+.. | |...-.+|. +=|+||+|.==|..=|-. +|..-... -.|-.
T Consensus 174 ---~tp~~~~~l~~l~~~alP~gvv~~v~-g~~~~~~~~L~----~~~~v~~V~fTGS~~~G~~i~~~aa~~~-~p~~l- 243 (479)
T cd07116 174 ---QTPASILVLMELIGDLLPPGVVNVVN-GFGLEAGKPLA----SSKRIAKVAFTGETTTGRLIMQYASENI-IPVTL- 243 (479)
T ss_pred ---CChHHHHHHHHHHHHHCCcCcEEEEe-cCchhHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHHcCC-CeEEE-
Confidence 233221 112221 2212221 3 333222333 237788776555543221 11111000 00111
Q ss_pred CCCCCceEEEEec----CCCCHHHHHHhhhhccCcCC---CCceEEEecCchhhHHHHHHHHHHHHhcCC----------
Q 013679 230 MPAGPSEVLVIAD----IYASPVHIAADLLSQAEHGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------- 292 (438)
Q Consensus 230 ~~AGPSEvlIiAD----~~Anp~~vAaDLLaQAEHd~---~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------- 292 (438)
-+-|-+=.+|+.| ++||.+..+-.++.=+=+.- .+...++. .++.. +++.+.+.+.++.+.
T Consensus 244 ElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l~~G~p~~~~~~ 321 (479)
T cd07116 244 ELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALI-QESIY-DRFMERALERVKAIKQGNPLDTETM 321 (479)
T ss_pred ECCCCCeEEEecCcccccccCHHHHHHHHHHHHhcCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 1234454555544 24777776666653221111 12222333 33343 555555554443321
Q ss_pred -----CH-------HHHHHh--------------------------------------h--c-CC---eEEEeCCHHHHH
Q 013679 293 -----RG-------EFASKA--------------------------------------L--G-HS---FMVFARDMLEGI 316 (438)
Q Consensus 293 -----r~-------~ia~~s--------------------------------------l--~-~g---~ii~v~~l~ea~ 316 (438)
++ +.+..+ + + .| .|+.++|.|||+
T Consensus 322 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~~~~~~eai 401 (479)
T cd07116 322 IGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTFKDEEEAL 401 (479)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEEeCCHHHHH
Confidence 00 111111 1 0 12 345589999999
Q ss_pred HHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccc
Q 013679 317 SFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLK 387 (438)
Q Consensus 317 ~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK 387 (438)
+++|..-==| ..|.++|.. .+..++ .+|.|++..+... + -.+|- +|..|+.|..++++|++
T Consensus 402 ~~aN~~~~gLsa~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~---~------~~~PfGG~k~SG~G~~~g~~~l~~~~~ 471 (479)
T cd07116 402 EIANDTLYGLGAGVWTRDGNTAYRMGRGI-QAGRVWTNCYHLY---P------AHAAFGGYKQSGIGRENHKMMLDHYQQ 471 (479)
T ss_pred HHHhCCcccceEEEEcCCHHHHHHHHHhc-CcCeEEECCCCCC---C------CCCCcCCCccCcCCccChHHHHHHhhc
Confidence 9999753222 567788885 455666 5799999954321 1 12454 46778888888889988
Q ss_pred eeeE
Q 013679 388 YMTV 391 (438)
Q Consensus 388 ~~s~ 391 (438)
..++
T Consensus 472 ~k~~ 475 (479)
T cd07116 472 TKNL 475 (479)
T ss_pred eEEE
Confidence 6665
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.76 E-value=23 Score=42.74 Aligned_cols=259 Identities=20% Similarity=0.214 Sum_probs=135.4
Q ss_pred EEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCch-hhhc--c-hHHH
Q 013679 113 RVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-ILKA--G-GAQA 187 (438)
Q Consensus 113 ~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~e-Iy~v--G-GAQA 187 (438)
..+.|+.-|+|..| .-||-.+ +..++||-+||. -|++-|+...-.+.-.+....+.+|+.+ ++.+ | |...
T Consensus 672 ~~~~P~GVv~~IsP---wNfPlai~~g~i~aALaaGN--~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~v 746 (1208)
T PRK11905 672 PGHKPLGPVVCISP---WNFPLAIFTGQIAAALVAGN--TVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTV 746 (1208)
T ss_pred ceecCccEEEEEcC---CcCHHHHHHHHHHHHHHcCC--EEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHH
Confidence 35679999999999 4566544 445668888887 4555565321111112233455667653 2221 3 3322
Q ss_pred HHHHhhcCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcc-cccCCCCCceEEEEecCCCCHHHHHHhhhhccCc----
Q 013679 188 ISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMI-SIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH---- 260 (438)
Q Consensus 188 IAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~~~~~~V-gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH---- 260 (438)
-.+|. .-|+||.|+==|..=|... +.+-......+ -|==.-|-+ .+|-|++||++.++.|++.=|=.
T Consensus 747 g~~Lv----~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN--~~IV~~dAdle~Av~~iv~saF~~aGQ 820 (1208)
T PRK11905 747 GAALV----ADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQN--AMIVDSSALPEQVVADVIASAFDSAGQ 820 (1208)
T ss_pred HHHHH----cCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcC--eEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 22232 2478888865555443322 11111000000 011112322 35558899999999998643211
Q ss_pred CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhh-----------------
Q 013679 261 GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKAL----------------- 301 (438)
Q Consensus 261 d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl----------------- 301 (438)
--.|...|+.. ++.+ +++.+.+...++++. . .+.+.++.
T Consensus 821 ~CsA~~rl~V~-~si~-d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~ 898 (1208)
T PRK11905 821 RCSALRVLCLQ-EDVA-DRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEK 898 (1208)
T ss_pred ccccCcEEEEe-hhHH-HHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCC
Confidence 12233344443 4454 777776666655542 0 01111111
Q ss_pred -----------------c---CC---eEEEeC--CHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCC
Q 013679 302 -----------------G---HS---FMVFAR--DMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEW 352 (438)
Q Consensus 302 -----------------~---~g---~ii~v~--~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~ 352 (438)
. .| .|+.++ |++|+++++|..--=+ ..|.++|+. .+..+++ +|.||+...
T Consensus 899 G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~-aGnvyIN~~ 977 (1208)
T PRK11905 899 GTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIR-AGNIYVNRN 977 (1208)
T ss_pred CeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCC-EeEEEECCC
Confidence 0 01 133343 7999999999764222 567788875 4666776 999999975
Q ss_pred CcccccccccCCCCCCCCCC-----cc-ccccCcccccccceeeEE
Q 013679 353 TPESVGDYASGTNHVLPTYG-----YA-RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 353 sp~a~GDY~aGpNHvLPT~G-----~A-R~~sgLsv~~FlK~~s~~ 392 (438)
+.-+ ....+|-+| +. |.-|+..+..|++..++.
T Consensus 978 ~~ga-------~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~ 1016 (1208)
T PRK11905 978 IIGA-------VVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTP 1016 (1208)
T ss_pred CCCC-------ccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceee
Confidence 3211 122344444 34 345556677788776654
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=90.65 E-value=27 Score=37.42 Aligned_cols=327 Identities=14% Similarity=0.146 Sum_probs=169.4
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCce
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENV-SELPDPELDAAVKEAFDVAYNNIYAFHLAQK-SAETS 102 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~-~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~-~~~~~ 102 (438)
..+-.+.+.++.+.++++.|+=..-.+....+. +.-.. .|+ ....+-++..++++++++..+. +..+.
T Consensus 19 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~~a~~~ev------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (449)
T cd07136 19 VEFRIEQLKKLKQAIKKYENEILEALKKDLGKS----EFEAYMTEI------GFVLSEINYAIKHLKKWMKPKRVKTPLL 88 (449)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHHHHHHH------HHHHHHHHHHHHHHHHHhCCCccCCccc
Confidence 334445566666677777776444444443221 10000 011 1344455666666666654432 11110
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHHHHH-HHH---cCCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYC-AKK---AGVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~A-A~l---~Gv~ 177 (438)
..|...-.++.|+.-|+++.|- -||... +...+||-.+|+.=| +=|+. .-.....+|+- .+. .|+=
T Consensus 89 ---~~~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~~~~ALaaGN~vi--~Kps~-~tp~~~~~l~~~~~~alP~gv~ 159 (449)
T cd07136 89 ---NFPSKSYIYYEPYGVVLIIAPW---NYPFQLALAPLIGAIAAGNTAV--LKPSE-LTPNTSKVIAKIIEETFDEEYV 159 (449)
T ss_pred ---cCCceeEEEEecCeEEEEECCC---chHHHHHHHHHHHHHhcCCEEE--EECcc-cchHHHHHHHHHHHHhCCCCEE
Confidence 1233334567899999999994 466444 345679999998544 33432 11112222221 112 2333
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHH
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIA 251 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vA 251 (438)
.+.. |+.+...+|. . ++||+|.=-|..=+ ++|+.+. . |-.. +.|-+=++| +++||.+..+
T Consensus 160 ~~v~-g~~~~~~~L~--~---~~v~~V~fTGS~~~g~~i~~~aa~~~~-~----v~lE-lgGknp~iV--~~dADld~aa 225 (449)
T cd07136 160 AVVE-GGVEENQELL--D---QKFDYIFFTGSVRVGKIVMEAAAKHLT-P----VTLE-LGGKSPCIV--DEDANLKLAA 225 (449)
T ss_pred EEEe-CChHHHHHHh--c---CCCCEEEEECCHHHHHHHHHHHHhcCC-C----EEEE-ecCCCeEEE--CCCCCHHHHH
Confidence 3332 4555555565 1 24888766665432 2222111 0 1111 234443333 4569999988
Q ss_pred HhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcC----CC-------------HHHHHHh----------
Q 013679 252 ADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSL----PR-------------GEFASKA---------- 300 (438)
Q Consensus 252 aDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l----~r-------------~~ia~~s---------- 300 (438)
-.++..+=+.. .+...++. .++.. ++..+.+.+.++.+ |. .+-+...
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG 303 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLV-HESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGG 303 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEE-cHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECC
Confidence 88876655432 12223333 33453 66666555555443 10 0111111
Q ss_pred -----------------------hc---CC---eEEEeCCHHHHHHHhhhhccccc--eecccChHH---HHhhcccccc
Q 013679 301 -----------------------LG---HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAEK---WESIIENAGS 346 (438)
Q Consensus 301 -----------------------l~---~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~~---~l~~i~nAGa 346 (438)
+. .| .|+.++|+|||++++|.. |-.| .|.++|... +..+++ +|.
T Consensus 304 ~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l~-~G~ 381 (449)
T cd07136 304 NTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSR-PKPLALYLFSEDKKVEKKVLENLS-FGG 381 (449)
T ss_pred CcCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cce
Confidence 11 12 345589999999999985 4444 567888754 567775 899
Q ss_pred cccCCCCccc-cccc-ccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 347 VFLGEWTPES-VGDY-ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 347 iFlG~~sp~a-~GDY-~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
|++...+... .+.. +.|- --+|..|..|..+++.|++..++.
T Consensus 382 v~vN~~~~~~~~~~~PfGG~----k~SG~G~~~g~~~l~~~t~~k~v~ 425 (449)
T cd07136 382 GCINDTIMHLANPYLPFGGV----GNSGMGSYHGKYSFDTFSHKKSIL 425 (449)
T ss_pred EEECCccccccCCCCCccCc----CcccCCcccCHHHHHHhccceEEE
Confidence 9999643111 0111 1111 235677888888889999876664
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=90.51 E-value=23 Score=38.35 Aligned_cols=244 Identities=17% Similarity=0.130 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQ 159 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~ 159 (438)
-+..++++++.|-... .+ +. | ..++.|+.-|+++.| .-||-.+ ++..+||-.||..=|+- |+.
T Consensus 134 ev~~~i~~l~~~a~~~-~~-~~-----~---~~~~~P~GVV~~I~p---wN~P~~~~~~~i~~ALaaGN~VVlK--ps~- 197 (500)
T TIGR01238 134 EVREAVDFCRYYAKQV-RD-VL-----G---EFSVESRGVFVCISP---WNFPLAIFTGQISAALAAGNTVIAK--PAE- 197 (500)
T ss_pred HHHHHHHHHHHHHHHH-HH-hc-----C---ceeccCcceEEEECC---CchHHHHHHHHHHHHHHcCCEEEEe--CCC-
Confidence 3666777777665432 11 11 1 135889999999999 4566544 55678999999884433 442
Q ss_pred CCCCCHHHH-HHHHHcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccc
Q 013679 160 DGSICKEVL-YCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISI 228 (438)
Q Consensus 160 ~G~i~p~iL-~AA~l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgI 228 (438)
.-......| .+...+|.. .++.+ | |...-.+|. +-|+||+|+==|..=+- +|+++-... .|-
T Consensus 198 ~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~----~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~--~v~- 270 (500)
T TIGR01238 198 QTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALT----SDPRIAGVAFTGSTEVAQLINQTLAQREDAPV--PLI- 270 (500)
T ss_pred CccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHh----cCCCcCeEEEECCHHHHHHHHHHHhhcccCCc--eEE-
Confidence 111112222 234556653 22222 3 222222222 24788888755554332 222210000 010
Q ss_pred cCCCCCceEEEEecCCCCHHHHHHhhhh----ccCcCCCCc-eEEEecCchhhHHHHHHHHHHHHhcCC-----------
Q 013679 229 DMPAGPSEVLVIADIYASPVHIAADLLS----QAEHGPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----------- 292 (438)
Q Consensus 229 D~~AGPSEvlIiAD~~Anp~~vAaDLLa----QAEHd~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----------- 292 (438)
=-+-|=+= +|-|++||.+.+|-.++. -+=.--.+. .++| .+++. +++.+.+.+.++.+.
T Consensus 271 lElGGknp--~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~ 345 (500)
T TIGR01238 271 AETGGQNA--MIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCV--QEDVA-DRVLTMIQGAMQELKVGVPHLLTTDV 345 (500)
T ss_pred EecCCcCc--EEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEE--cHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCc
Confidence 00113222 344677999877666543 111112233 3444 34453 666666666655532
Q ss_pred ----C---HHHHH----HhhcC---------------------------------------C---eEEEeC--CHHHHHH
Q 013679 293 ----R---GEFAS----KALGH---------------------------------------S---FMVFAR--DMLEGIS 317 (438)
Q Consensus 293 ----r---~~ia~----~sl~~---------------------------------------g---~ii~v~--~l~ea~~ 317 (438)
. .+.+. ++... | .|+.++ |+|||++
T Consensus 346 Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~ 425 (500)
T TIGR01238 346 GPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVD 425 (500)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHH
Confidence 1 11111 11100 1 223344 7999999
Q ss_pred Hhhhhcccc-ceecccChHH---HHhhcccccccccCCCC
Q 013679 318 FSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWT 353 (438)
Q Consensus 318 ~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~s 353 (438)
++|..--=| ..|.++|... +..++ ++|.||++..+
T Consensus 426 ~~N~~~~gLs~~vfT~d~~~~~~~~~~l-~~G~v~IN~~~ 464 (500)
T TIGR01238 426 QINQTGYGLTMGVHSRIETTYRWIEKHA-RVGNCYVNRNQ 464 (500)
T ss_pred HHhCCCCCCeEEEEeCCHHHHHHHHHhC-CcceEEECCCC
Confidence 999863223 5667777753 55666 59999999643
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=90.43 E-value=28 Score=37.31 Aligned_cols=281 Identities=17% Similarity=0.147 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHhccCCCce-EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCC
Q 013679 82 FDVAYNNIYAFHLAQKSAETS-VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQ 159 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~~~~~-~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~ 159 (438)
+..++++++.|-+.-+..... .....+...-.++.|+.-|++..|= -||- ..++..+||-.||..=|+- |+.
T Consensus 100 v~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~Pl~~~~~~i~~AL~aGN~VvlK--Ps~- 173 (475)
T cd07117 100 IPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPW---NFPFLMAAWKLAPALAAGNTVVIK--PSS- 173 (475)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCc-
Confidence 556666676654321111111 1112333445678999999999995 3553 4566788999999875544 432
Q ss_pred CCCCCHHHHHHHHHcCC-chhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH----H--HHHHHhcCCCCccccc
Q 013679 160 DGSICKEVLYCAKKAGV-THILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV----T--AAKMILQNSEAMISID 229 (438)
Q Consensus 160 ~G~i~p~iL~AA~l~Gv-~eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV----~--~AK~~v~~~~~~VgID 229 (438)
.-......|+-+-..++ +.++.+ | |...-.+|. .-|.||+|+==|..-+ . +|+++.- +...
T Consensus 174 ~~p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~-----~~lE 244 (475)
T cd07117 174 TTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEYLL----NHPGLDKLAFTGSTEVGRDVAIAAAKKLIP-----ATLE 244 (475)
T ss_pred cCcHHHHHHHHHHHHhCCcCcEEEEecCcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhccCCc-----EEEe
Confidence 11122222221111111 112222 2 444434443 2467888875555443 1 2222211 2222
Q ss_pred CCCCCceEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C--------
Q 013679 230 MPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-------- 293 (438)
Q Consensus 230 ~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-------- 293 (438)
+.|-+=+ |-+++||.+..|-+++.-+=.. -.+...++. .++.. +++.+.+.+.++.+. .
T Consensus 245 -lgGk~p~--iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~~~gp 319 (475)
T cd07117 245 -LGGKSAN--IIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFV-QEGIY-DEFVAKLKEKFENVKVGNPLDPDTQMGA 319 (475)
T ss_pred -CCCCCeE--EECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEE-eHHHH-HHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence 2354433 3335689998777654432222 122222333 33343 666666655555441 0
Q ss_pred ----------HHHHHHhh-----------------------------------------c-CC---eEEEeCCHHHHHHH
Q 013679 294 ----------GEFASKAL-----------------------------------------G-HS---FMVFARDMLEGISF 318 (438)
Q Consensus 294 ----------~~ia~~sl-----------------------------------------~-~g---~ii~v~~l~ea~~~ 318 (438)
.+.+..+. + .| .++-++|.|||+++
T Consensus 320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 399 (475)
T cd07117 320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM 399 (475)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence 01112211 1 12 24557899999999
Q ss_pred hhhhc-cccceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCccccccccee
Q 013679 319 SNLYA-PEHLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYM 389 (438)
Q Consensus 319 ~N~~A-PEHLel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~ 389 (438)
+|.-- +=-..+.++|.. .+..++ .+|.|++..+... +.-+|- +|..|..|.-+++.|++.-
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l-~~G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 469 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAV-ETGRVWVNTYNQI---------PAGAPFGGYKKSGIGRETHKSMLDAYTQMK 469 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhC-CcceEEECCCCCC---------CCCCCCCCCccCcCCCCchHHHHHHHhCeE
Confidence 99751 122667788864 356777 5999999974421 112455 5667888888888898876
Q ss_pred eEE
Q 013679 390 TVQ 392 (438)
Q Consensus 390 s~~ 392 (438)
++.
T Consensus 470 ~v~ 472 (475)
T cd07117 470 NIY 472 (475)
T ss_pred EEE
Confidence 653
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=89.93 E-value=30 Score=36.97 Aligned_cols=253 Identities=14% Similarity=0.127 Sum_probs=134.1
Q ss_pred EEEEEEec-ceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--c-
Q 013679 111 CKRVARSI-GSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--G- 183 (438)
Q Consensus 111 ~g~r~~Pi-~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v--G- 183 (438)
.-.+..|+ .-|++..|- -||- .++...+||-.+|..=|+= |.. .-..... +....+.+|.. .++.+ |
T Consensus 132 ~~~~~~P~~Gvv~~I~P~---N~P~~~~~~~~~~ALaaGN~VvlK--ps~-~~p~~~~~l~~~~~~aGlP~gvv~~v~g~ 205 (472)
T TIGR03250 132 VFTQREPLLGVISAITPF---NHPMNQVAHKIAPAIATNNRMVVK--PSE-KTPLSALYLADILYEAGLPPQMLQVVTGD 205 (472)
T ss_pred EEEEEcCCCCEEEEEcCC---cHHHHHHHHHHHHHHHcCCEEEEE--CCC-cchHHHHHHHHHHHHcCCCcccEEEEecC
Confidence 44678998 999999994 4665 4455788999999874443 431 1112222 23345566654 23322 3
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH--HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-Cc
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA-EH 260 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA-EH 260 (438)
|...-.+|. +-|+||+|.==|..-|-.. +.. +.. .+-..+ -|-+=+ |-+++||.+..+-.++.-+ .|
T Consensus 206 ~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~a-~~~--~~~lEl-GGk~p~--iV~~dAdl~~aa~~i~~~~f~~ 275 (472)
T TIGR03250 206 PREIADELI----TNPHVDLVTFTGGVAIGKYIAARA-GYR--RQVLEL-GGNDPL--IVMEDADLDRAADLAVKGSYKN 275 (472)
T ss_pred chHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHh-cCC--ceEEec-CCCCeE--EECCCCCHHHHHHHHHHHHHHh
Confidence 333333332 2488998765555433211 110 000 022222 244433 3444689998887766544 22
Q ss_pred C---CCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C---H----HHHHHhhcC------------
Q 013679 261 G---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R---G----EFASKALGH------------ 303 (438)
Q Consensus 261 d---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r---~----~ia~~sl~~------------ 303 (438)
. -.+...++.. ++.. ++..+.+.+.++.+. . . +.++.+...
T Consensus 276 ~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g 353 (472)
T TIGR03250 276 SGQRCTAVKRMLVQ-ESVA-DRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDG 353 (472)
T ss_pred hCCCCCCCcEEEEe-HhHH-HHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC
Confidence 1 1232333333 3343 555555555544431 0 1 112233211
Q ss_pred -----------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhhcccccccccCCC
Q 013679 304 -----------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESIIENAGSVFLGEW 352 (438)
Q Consensus 304 -----------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~nAGaiFlG~~ 352 (438)
| .++.++|.+||++++|.- |-. ..+.++|... +.+++ ++|.|+++..
T Consensus 354 ~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~-~~gL~a~v~t~d~~~~~~~~~~l-~~G~v~iN~~ 431 (472)
T TIGR03250 354 ALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNST-AYGLSSGVCTNRLDYITRFIAEL-QVGTVNVWEV 431 (472)
T ss_pred EEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCC-CccceEEEEcCCHHHHHHHHHHC-CcceEEEcCC
Confidence 2 234579999999999976 333 5677888764 55666 5999999865
Q ss_pred CcccccccccCCCCCCCCC-----CccccccC-cccccccceeeE
Q 013679 353 TPESVGDYASGTNHVLPTY-----GYARMYGG-VSLDSFLKYMTV 391 (438)
Q Consensus 353 sp~a~GDY~aGpNHvLPT~-----G~AR~~sg-Lsv~~FlK~~s~ 391 (438)
+... ..+ +|-+ |..|..+| -++++|.+..++
T Consensus 432 ~~~~-------~~~-~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i 468 (472)
T TIGR03250 432 PGYR-------LEL-TPFGGIKDSGLGYKEGVQEAMKSFTNLKTY 468 (472)
T ss_pred CCCC-------CCC-CCCCccccccCCCCCChHHHHHHhhceEEE
Confidence 4211 111 5554 45544443 677778876665
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.47 E-value=47 Score=39.59 Aligned_cols=265 Identities=19% Similarity=0.226 Sum_probs=137.5
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-hhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-ILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-Iy~v-- 182 (438)
|...-.+++|+.-|++..| .-||-.. +..++||-++|.. |++-|.. ...... .+....+.+|+-+ ++.+
T Consensus 675 ge~n~~~~~P~GVv~~IsP---wNfPlai~~~~i~aALaaGNt--VIlKPse-~tpl~a~~l~~ll~eAGlP~gvl~lv~ 748 (1038)
T PRK11904 675 GESNELRLHGRGVFVCISP---WNFPLAIFLGQVAAALAAGNT--VIAKPAE-QTPLIAAEAVKLLHEAGIPKDVLQLLP 748 (1038)
T ss_pred CceeEEEEecceEEEEECC---CccHHHHHHHHHHHHHHcCCE--EEeeCCC-cCHHHHHHHHHHHHHhCcCcceEEEee
Confidence 4455577899999999999 4677555 4466799999966 4444542 211111 1223445566542 2111
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH--HHHhcCCCCc-c-cccCCCCCceEEEEecCCCCHHHHHHhhhhc
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA--KMILQNSEAM-I-SIDMPAGPSEVLVIADIYASPVHIAADLLSQ 257 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~~~~~~-V-gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ 257 (438)
| |...-.+|. .-|+||.|.==|..=|... +++-.. .|. + -|=-.-|-+ .+|.|++||++.++.|++.=
T Consensus 749 G~g~~vg~~Lv----~~p~v~~V~FTGS~~~g~~I~~~~A~~-~g~~~pvi~ElGGkN--a~IV~~dAdld~Av~~iv~s 821 (1038)
T PRK11904 749 GDGATVGAALT----ADPRIAGVAFTGSTETARIINRTLAAR-DGPIVPLIAETGGQN--AMIVDSTALPEQVVDDVVTS 821 (1038)
T ss_pred CCchHHHHHHh----cCCCcCeEEEECCHHHHHHHHHHHhhc-cCCCceEEEEcCCcC--eEEECCCCCHHHHHHHHHHH
Confidence 2 322222222 2478888876665443322 111111 000 0 011112322 35668899999999998643
Q ss_pred cC-cC---CCCceEEEecCchhhHHHHHHHHHHHHhcCC----C--------------HHHH----HHh-----------
Q 013679 258 AE-HG---PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R--------------GEFA----SKA----------- 300 (438)
Q Consensus 258 AE-Hd---~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r--------------~~ia----~~s----------- 300 (438)
|= +. -.|...|+.. ++.. +++.+.+...++.+. . .+.+ .++
T Consensus 822 aF~~aGQ~CsA~~rl~V~-~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~ 899 (1038)
T PRK11904 822 AFRSAGQRCSALRVLFVQ-EDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLP 899 (1038)
T ss_pred HHhCCCCccccCcEEEEe-HHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCC
Confidence 21 11 1233334333 3453 666666665554442 0 0000 110
Q ss_pred -----------------------hc---CC---eEEEeC--CHHHHHHHhhhhcccc-ceecccChH---HHHhhccccc
Q 013679 301 -----------------------LG---HS---FMVFAR--DMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAG 345 (438)
Q Consensus 301 -----------------------l~---~g---~ii~v~--~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAG 345 (438)
+. .| .|+.++ |++|+++++|.--==+ ..|.++|+. .+..+++ +|
T Consensus 900 ~~~~~~~G~fv~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~-aG 978 (1038)
T PRK11904 900 LPAGTENGHFVAPTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVR-VG 978 (1038)
T ss_pred CCCCCCCceEEeeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCC-EE
Confidence 10 01 133344 7999999999753222 567788875 4667775 99
Q ss_pred ccccCCCCcccc-cc-cccCCCCCCCCCCcc-ccccCcccccccceeeEE
Q 013679 346 SVFLGEWTPESV-GD-YASGTNHVLPTYGYA-RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 346 aiFlG~~sp~a~-GD-Y~aGpNHvLPT~G~A-R~~sgLsv~~FlK~~s~~ 392 (438)
.||++..+.-+. |. -+.|- --+|+. |.-|...+..|++..++.
T Consensus 979 ~vyIN~~~~ga~vg~qPFGG~----~~SG~G~kaGG~~~L~~f~~~ktv~ 1024 (1038)
T PRK11904 979 NVYVNRNQIGAVVGVQPFGGQ----GLSGTGPKAGGPHYLLRFATEKTVT 1024 (1038)
T ss_pred EEEEeCCCccCCCCCCCCCCC----CCCCCCCccchHHHHHHHhceEEEE
Confidence 999997543221 21 12222 134455 333455677888766654
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=89.23 E-value=35 Score=36.67 Aligned_cols=281 Identities=16% Similarity=0.155 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHHhccC--CCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCC
Q 013679 82 FDVAYNNIYAFHLAQKS--AETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~--~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
+..+++.++.|...-.+ .... ...+|...-.++.|+.-|++..|= -||-.. ++..+||-.||..=|+=.+|-.
T Consensus 108 v~~~~~~~~~~a~~a~~~~g~~~-~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~VvlKps~~~ 183 (481)
T cd07143 108 VQASADTFRYYGGWADKIHGQVI-ETDIKKLTYTRHEPIGVCGQIIPW---NFPLLMCAWKIAPALAAGNTIVLKPSELT 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcCccc-cCCCCceEEEEEecceeEEEECCC---cChHHHHHHHHHHHHHcCCEEEEeCCCCC
Confidence 55555666655432111 1111 112343445678999999999995 466444 6788999999987554433321
Q ss_pred CCCCCCHH-HHHHHHHcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCccc
Q 013679 159 QDGSICKE-VLYCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMIS 227 (438)
Q Consensus 159 ~~G~i~p~-iL~AA~l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~Vg 227 (438)
..... +......+|.. .++.+ | |...-.+|. .-|+||+|.==|..-|- +|++-+-. |.
T Consensus 184 ---p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~----~~~~vd~V~fTGs~~~G~~i~~~aa~~~~~~----~~ 252 (481)
T cd07143 184 ---PLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAIS----SHMDIDKVAFTGSTLVGRKVMEAAAKSNLKK----VT 252 (481)
T ss_pred ---cHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHh----cCCCCCEEEEECchHHHHHHHHHHHHhcCCE----EE
Confidence 12222 22344556654 33433 3 332222232 24889998765555432 22111100 11
Q ss_pred ccCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------
Q 013679 228 IDMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------ 293 (438)
Q Consensus 228 ID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------ 293 (438)
.. +.|-+= +|-|++||.+..+.+++.-+=+ .-.+...++. .++.. ++..+.+.+.++.+. .
T Consensus 253 lE-lGG~~p--~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~ 327 (481)
T cd07143 253 LE-LGGKSP--NIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYV-QEGIY-DKFVKRFKEKAKKLKVGDPFAEDTFQ 327 (481)
T ss_pred ee-cCCCCe--eEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEE-eHhHH-HHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 11 224443 3445668998877766544322 2223333333 22343 666665655554431 0
Q ss_pred --------H----HHHHHhh-------------------------------------c-CC---eEEEeCCHHHHHHHhh
Q 013679 294 --------G----EFASKAL-------------------------------------G-HS---FMVFARDMLEGISFSN 320 (438)
Q Consensus 294 --------~----~ia~~sl-------------------------------------~-~g---~ii~v~~l~ea~~~~N 320 (438)
. +.+.++. + .| .++.++|.+||++++|
T Consensus 328 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 407 (481)
T cd07143 328 GPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRAN 407 (481)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHh
Confidence 0 1111110 0 12 2344789999999999
Q ss_pred hhc-cccceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 321 LYA-PEHLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 321 ~~A-PEHLel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
..- +--..|.++|.. .++.++ .+|.|++..+.. .+.-+|-+ |..|+.|.-++..|++..++
T Consensus 408 ~~~~gL~~~v~t~d~~~~~~~~~~l-~~G~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i 477 (481)
T cd07143 408 DSTYGLAAAVFTNNINNAIRVANAL-KAGTVWVNCYNL---------LHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477 (481)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhc-CcCeEEECCCCC---------CCCCCCCCCccccccCcccHHHHHHHHhCeEEE
Confidence 642 112578888875 356666 589999997532 11224554 56677777778888887665
Q ss_pred E
Q 013679 392 Q 392 (438)
Q Consensus 392 ~ 392 (438)
.
T Consensus 478 ~ 478 (481)
T cd07143 478 H 478 (481)
T ss_pred E
Confidence 3
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=88.69 E-value=37 Score=36.27 Aligned_cols=252 Identities=20% Similarity=0.182 Sum_probs=137.2
Q ss_pred EEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc-hhhhc--c-
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILKA--G- 183 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~-eIy~v--G- 183 (438)
....++.|+.-|++..|- -||-. .++..+||-.+|..=|+- |+. .-...... ..+...+|.. .++.+ |
T Consensus 134 ~~~~~~~P~GVv~~I~pw---N~P~~~~~~~i~~ALaaGN~VV~K--Ps~-~tp~~~~~l~~~~~~aGlP~gvv~~v~g~ 207 (476)
T cd07142 134 HVYTLHEPIGVVGQIIPW---NFPLLMFAWKVGPALACGNTIVLK--PAE-QTPLSALLAAKLAAEAGLPDGVLNIVTGF 207 (476)
T ss_pred eEEEEEeceeeEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCC-cccHHHHHHHHHHHHcCcCcccEEEEeCC
Confidence 345678999999999994 46644 456788999999875544 442 11122222 2344556653 33332 3
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhc
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQ 257 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ 257 (438)
|...-.+|. +-|+||+|+==|..-+ .+|++.+- .|-..+ .|-+= +|-+++||.+..|-.++.-
T Consensus 208 ~~~~~~~L~----~~~~v~~v~fTGs~~~G~~v~~~aa~~~~~----~v~lEl-gGk~p--~iV~~dADl~~Aa~~i~~~ 276 (476)
T cd07142 208 GPTAGAAIA----SHMDVDKVAFTGSTEVGKIIMQLAAKSNLK----PVTLEL-GGKSP--FIVCEDADVDKAVELAHFA 276 (476)
T ss_pred chhHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHHcCCC----eEEEEC-CCCCe--eEECCCCCHHHHHHHHHHH
Confidence 333223333 3588998876665442 22320110 122222 34443 3345678999888777654
Q ss_pred cCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc---------
Q 013679 258 AEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG--------- 302 (438)
Q Consensus 258 AEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~--------- 302 (438)
+=+.. .+...++. .++.. +++.+.+.+++..+. . .+.+.++.+
T Consensus 277 ~f~~aGQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg 354 (476)
T cd07142 277 LFFNQGQCCCAGSRTFV-HESIY-DEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGG 354 (476)
T ss_pred HhcCCCCCCCCCeeEEE-eHHHH-HHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecC
Confidence 43321 12222333 23343 555555544443221 0 011111110
Q ss_pred -----------------------------CC---eEEEeCCHHHHHHHhhhhccc--cceecccChH---HHHhhccccc
Q 013679 303 -----------------------------HS---FMVFARDMLEGISFSNLYAPE--HLIVNVKDAE---KWESIIENAG 345 (438)
Q Consensus 303 -----------------------------~g---~ii~v~~l~ea~~~~N~~APE--HLel~~~~p~---~~l~~i~nAG 345 (438)
.| .|+-++|++||++++|.- +- ...|.++|.. .++.+++ +|
T Consensus 355 ~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~a~vft~d~~~a~~~~~~l~-~G 432 (476)
T cd07142 355 DRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNS-KYGLAAGVFSKNIDTANTLSRALK-AG 432 (476)
T ss_pred CcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cc
Confidence 02 245589999999999974 33 3667788875 4677775 89
Q ss_pred ccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 346 SVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 346 aiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
.|++..+.. .| --+|-+ |..|+.|.-+++.|.+..++
T Consensus 433 ~v~iN~~~~---~~------~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v 474 (476)
T cd07142 433 TVWVNCYDV---FD------ASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474 (476)
T ss_pred eEEECCCCC---CC------CCCCCCCCccCcCCccchHHHHHHhhheeEE
Confidence 999996431 11 114554 56666666677777776654
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=88.54 E-value=37 Score=36.14 Aligned_cols=252 Identities=20% Similarity=0.193 Sum_probs=135.6
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v-- 182 (438)
|-..-.++.|+.-|++..|=- ||- +.+...+||-.||..=|+- |+.. -..... +......+|.. .++.+
T Consensus 132 ~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~~~~AL~aGN~VvlK--ps~~-~p~~~~~l~~~~~~aglP~g~~~~v~ 205 (476)
T cd07091 132 NFLAYTRREPIGVCGQIIPWN---FPLLMLAWKLAPALAAGNTVVLK--PAEQ-TPLSALYLAELIKEAGFPPGVVNIVP 205 (476)
T ss_pred CceEEEEEeceeEEEEECCCc---CHHHHHHHHHHHHHHcCCEEEEe--CCCC-ChHHHHHHHHHHHHcCcCCCcEEEEe
Confidence 444456889999999999953 553 3456788999999874443 4421 111112 22334445543 22221
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHH-HHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAK-MILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADL 254 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK-~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDL 254 (438)
| |.+.-.+|. .-|+||+|+==|..-+ ++|+ .+- .|-.-+ -|-+ -+|-|++||-+..|-.+
T Consensus 206 g~~~~~~~~L~----~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~-----~~~lEl-gG~~--~~iV~~dADl~~Aa~~i 273 (476)
T cd07091 206 GFGPTAGAAIS----SHMDVDKIAFTGSTAVGRTIMEAAAKSNLK-----KVTLEL-GGKS--PNIVFDDADLDKAVEWA 273 (476)
T ss_pred CCChhHHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhcCCc-----eEEEec-CCCC--eEEECCCCCHHHHHHHH
Confidence 2 333223332 3478888875555332 1222 100 011111 1222 34455678988877777
Q ss_pred hhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C---------------HHH---HHHhhcC----
Q 013679 255 LSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R---------------GEF---ASKALGH---- 303 (438)
Q Consensus 255 LaQAEHd----~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r---------------~~i---a~~sl~~---- 303 (438)
+.-+=.. -.+. .++| .++.. ++..+.+.++++.+. . ..+ +.++..+
T Consensus 274 ~~~~~~~~GQ~C~a~~rv~V--~~~v~-~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v 350 (476)
T cd07091 274 AFGIFFNQGQCCCAGSRIFV--QESIY-DEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATL 350 (476)
T ss_pred HHHHHhccCCCCcCCcEEEE--eHHHH-HHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEE
Confidence 5544332 1222 3444 33343 666666666555431 0 111 1222111
Q ss_pred ----------------------------------C---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhhc
Q 013679 304 ----------------------------------S---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESII 341 (438)
Q Consensus 304 ----------------------------------g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i 341 (438)
| .++-++|++||++++|.. +-- ..|.++|+.. +..++
T Consensus 351 l~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gLsa~v~t~d~~~~~~~~~~l 429 (476)
T cd07091 351 LTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDT-EYGLAAGVFTKDINKALRVSRAL 429 (476)
T ss_pred EeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhc
Confidence 1 234479999999999986 333 5677888754 55566
Q ss_pred ccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
++|.|++..... .+.-+|-+ |..|+.|..+++.|++..++
T Consensus 430 -~~g~v~iN~~~~---------~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~ 474 (476)
T cd07091 430 -KAGTVWVNTYNV---------FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474 (476)
T ss_pred -CcceEEECCCCC---------CCCCCCcCCcccCcCCccchHHHHHHhhceeEE
Confidence 589999997421 12235654 56666666677788877665
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.90 E-value=0.78 Score=49.33 Aligned_cols=83 Identities=22% Similarity=0.225 Sum_probs=59.0
Q ss_pred EEEeCCHHHHHHHhhhhcccc--ceecccChHHHHhhc--ccccccccCCCCccccccc--ccCCCCCCCCCCccccccC
Q 013679 306 MVFARDMLEGISFSNLYAPEH--LIVNVKDAEKWESII--ENAGSVFLGEWTPESVGDY--ASGTNHVLPTYGYARMYGG 379 (438)
Q Consensus 306 ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~~l~~i--~nAGaiFlG~~sp~a~GDY--~aGpNHvLPT~G~AR~~sg 379 (438)
++-++|+|||++++|. .+=. ..|.++|......-. -.+|.|++..+.......+ +.| .-.+|..|..|.
T Consensus 379 v~~~~~~dEAi~lAN~-t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG----~k~SG~G~~~g~ 453 (472)
T COG1012 379 VIRFKDEEEAIELAND-TEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGG----VKQSGLGREGGK 453 (472)
T ss_pred EEEeCCHHHHHHHHhC-CCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCC----cccccCCccchH
Confidence 4557899999999999 6644 578899987665533 5799999998743111111 223 235677788889
Q ss_pred cccccccceeeEEE
Q 013679 380 VSLDSFLKYMTVQS 393 (438)
Q Consensus 380 Lsv~~FlK~~s~~~ 393 (438)
.++..|+..-++..
T Consensus 454 ~~~~~~~~~k~v~~ 467 (472)
T COG1012 454 YGLEEFTEVKTVTI 467 (472)
T ss_pred HHHHHHhcceEEEE
Confidence 99999988877664
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=87.76 E-value=45 Score=36.12 Aligned_cols=262 Identities=18% Similarity=0.161 Sum_probs=139.2
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~-eIy~v-- 182 (438)
|-..-.++.|+.-|+++.| .-||-.. +...+||-.||..=|+-.+|- -...... ..+...+|+. .++.+
T Consensus 157 ~~~~~~~~~P~GVv~~I~p---wN~P~~~~~~~i~~ALaaGN~VVlKPs~~---tp~~~~~l~~~~~~aGlP~gvv~vv~ 230 (512)
T cd07124 157 GEDNRYVYRPLGVGAVISP---WNFPLAILAGMTTAALVTGNTVVLKPAED---TPVIAAKLVEILEEAGLPPGVVNFLP 230 (512)
T ss_pred CceeEEEEecceEEEEECC---CChHHHHHHHHHHHHHHcCCEEEEECCcc---ccHHHHHHHHHHHHhCcCCCceEEec
Confidence 4344567899999999999 4677654 557889999998755543332 1122223 3355566664 23222
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
| |...-.+|. .-|.||+|.==|..-+- +|+++.+..+..--+=-+.|-+= +|-|++||.+..|-.++
T Consensus 231 g~~~~~~~~L~----~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p--~iV~~daDl~~Aa~~i~ 304 (512)
T cd07124 231 GPGEEVGDYLV----EHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNA--IIVDEDADLDEAAEGIV 304 (512)
T ss_pred cCchHHHHHHh----cCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCe--EEECCCCCHHHHHHHHH
Confidence 2 333223332 24789998666665542 22210000000001112334443 44456799998877765
Q ss_pred hccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------H---H----HHHHh---------
Q 013679 256 SQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------G---E----FASKA--------- 300 (438)
Q Consensus 256 aQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------~---~----ia~~s--------- 300 (438)
.-+=+ .-.+...++.. +++. +++.+.+.+.+..+. . . + .+..+
T Consensus 305 ~~~f~~~GQ~C~a~~rv~V~-~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~g 382 (512)
T cd07124 305 RSAFGFQGQKCSACSRVIVH-ESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLG 382 (512)
T ss_pred HHHHhhCCCccccceEEEEc-HHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEec
Confidence 43333 22333344443 3343 666666655554331 0 0 1 01100
Q ss_pred ---------------------------hc---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhccc
Q 013679 301 ---------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIEN 343 (438)
Q Consensus 301 ---------------------------l~---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~n 343 (438)
+. .| .++-++|+|||++++|..- +=-..|.++|... +..+++
T Consensus 383 G~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~- 461 (512)
T cd07124 383 GEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFE- 461 (512)
T ss_pred CccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCC-
Confidence 10 12 3455799999999999842 1125677888754 566765
Q ss_pred ccccccCCCCcccccccccCCCCCCCCCC-----cc-ccccCcccccccceeeE
Q 013679 344 AGSVFLGEWTPESVGDYASGTNHVLPTYG-----YA-RMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 344 AGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~A-R~~sgLsv~~FlK~~s~ 391 (438)
+|.||++..... + .++-+|-+| .. |..|.-+++.|++..++
T Consensus 462 ~G~v~vN~~~~~---~----~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v 508 (512)
T cd07124 462 VGNLYANRKITG---A----LVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508 (512)
T ss_pred cceEEECCCCCC---C----CCCCCCCCccccccCCCccCcHHHHHHhccEEEE
Confidence 799999965421 1 223356655 34 33344556668776665
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=87.43 E-value=40 Score=38.46 Aligned_cols=284 Identities=13% Similarity=0.151 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHhccCC-CceE--EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 82 FDVAYNNIYAFHLAQKSA-ETSV--ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~~-~~~~--~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
++.+++.++.|.+...+. .+.. ...+|...-.++.|+.=||+..|- . |-..+.-+.||-.||+.=|+ =|..
T Consensus 367 v~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pw-n---P~~~~~kiapALaaGNtVVl--KPse 440 (718)
T PLN02418 367 IASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFES-R---PDALVQIASLAIRSGNGLLL--KGGK 440 (718)
T ss_pred HHHHHHHHHHHhcCccccCccccccccCCCceEEEEEEeeeEEEEEeCC-C---cHHHHHHHHHHHHhCCEEEE--eCCc
Confidence 455666677665532111 1111 123455556788999999999996 3 44444788999999987444 3431
Q ss_pred CCCCCCHHHHH-HHHH---cCC----chhhhcchHHHHHHHhhcCCCCCCceEEecCCcH-HHHH-HHHHhcCCCCcccc
Q 013679 159 QDGSICKEVLY-CAKK---AGV----THILKAGGAQAISAMAWGTESCPKVEKIFGPGNQ-YVTA-AKMILQNSEAMISI 228 (438)
Q Consensus 159 ~~G~i~p~iL~-AA~l---~Gv----~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~-yV~~-AK~~v~~~~~~VgI 228 (438)
.-......|+ ..+. .|+ =.+.. ||...-++|. .-|.||+|.==|.. .+.. |.+-+-. | +
T Consensus 441 -~tp~s~~~l~~l~~eAlP~gv~~~v~nvv~-g~~~~g~~L~----~~~~v~~V~FTGSt~~i~~~aa~~~k~----v-~ 509 (718)
T PLN02418 441 -EAARSNAILHKVITDAIPKTVGGKLIGLVT-SRDEIPDLLK----LDDVIDLVIPRGSNKLVSQIKASTKIP----V-L 509 (718)
T ss_pred -cchHHHHHHHHHHHHHccccCCcceEEEeC-CcHHHHHHHh----hCCCCCEEEEeCCHHHHHHHHHhcCCC----E-E
Confidence 1111111111 1111 352 11121 5553333343 24778887533332 2222 2111100 1 1
Q ss_pred cCCCCCceEEEEecCCCCHHHHHHhhhhcc-CcCC--C-CceEEEecCchhhHHH--HHHHHHHHHhc---C---CCH-H
Q 013679 229 DMPAGPSEVLVIADIYASPVHIAADLLSQA-EHGP--D-SQVVLVIVGDGVDLDA--IEQEISKQCQS---L---PRG-E 295 (438)
Q Consensus 229 D~~AGPSEvlIiAD~~Anp~~vAaDLLaQA-EHd~--~-a~~vLvt~s~~la~~~--V~~ei~~ql~~---l---~r~-~ 295 (438)
=-+-|=+=+ |-|++||.+..+-.++.-+ -++- . ..-++|-.| ++ ++ +...|++-.+. + .|. .
T Consensus 510 lELGGk~p~--iV~~DADld~A~~~i~~~~~~nGQ~C~a~~RllVh~~--i~-d~G~~~~~i~~a~~~Ga~l~Gg~~~~g 584 (718)
T PLN02418 510 GHADGICHV--YVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKD--LV-QNGGLNDLLVALRSAGVTLYGGPRASK 584 (718)
T ss_pred EeCCCcceE--EEeCCCCHHHHHHHHHHHhCCCCCccccCcEEEEecc--cc-ccccHHHHHHHHHHCCCEEECCccccC
Confidence 112232333 3345599998766665432 2321 1 112444333 32 33 44444432211 1 110 0
Q ss_pred H---H-HHhh-c--CCe---EEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccccccCCCCcccccccc
Q 013679 296 F---A-SKAL-G--HSF---MVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYA 361 (438)
Q Consensus 296 i---a-~~sl-~--~g~---ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~ 361 (438)
+ . ..-+ + .|- +.-++|+|||++++|..--=| -.|.++|... +..+|+ +|.||+..++....+=-+
T Consensus 585 ~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~-aG~V~IN~~~~~~~~~Pf 663 (718)
T PLN02418 585 LLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVD-SAAVFHNASTRFSDGARF 663 (718)
T ss_pred eeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCC-eeEEEEeCCCCCCCCCCC
Confidence 0 0 0112 1 242 234899999999999987777 5688888754 666766 899999975422111011
Q ss_pred cCCCCCCCCCCc--cccc--cCcccccccceeeEE
Q 013679 362 SGTNHVLPTYGY--ARMY--GGVSLDSFLKYMTVQ 392 (438)
Q Consensus 362 aGpNHvLPT~G~--AR~~--sgLsv~~FlK~~s~~ 392 (438)
.|- .-+|. .|.. |..++++|++.-++.
T Consensus 664 GG~----k~SG~stGr~~~~G~~gl~~~t~~K~v~ 694 (718)
T PLN02418 664 GLG----AEVGISTGRIHARGPVGVEGLLTTRWIL 694 (718)
T ss_pred CCc----ccccccCCcCCCCCHHHHHHHhcEEEEE
Confidence 111 12333 4442 666888888876654
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=87.06 E-value=44 Score=35.34 Aligned_cols=251 Identities=19% Similarity=0.204 Sum_probs=128.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchHhh-hhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCch-hhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVTH-ILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~e-Iy~v-- 182 (438)
|-..-.++.|+.-|++..|= -||-... ...+||-.+|..=|+-.+|- .......+ .....+|..+ ++.+
T Consensus 108 ~~~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlKps~~---~p~~~~~l~~~~~~aGlP~gvv~~v~ 181 (448)
T TIGR01780 108 DKRLLVIKQPVGVCAAITPW---NFPAAMITRKAGAALAAGCTVVVKPAEQ---TPLSALALARLAEQAGIPKGVLNVIT 181 (448)
T ss_pred CceeEEEEeeeeEEEEEcCC---ChHHHHHHHHHHHHHHcCCeEeeECCcc---chHHHHHHHHHHHHcCCCccceEEEe
Confidence 33333556899999999994 5775544 47889999998755543332 11222222 3456677642 2222
Q ss_pred c--hHHHHHHHhhcCCCCCCceEEecCCcHHH--HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc
Q 013679 183 G--GAQAISAMAWGTESCPKVEKIFGPGNQYV--TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 258 (438)
Q Consensus 183 G--GAQAIAAlAyGTetIp~VDkIvGPGN~yV--~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA 258 (438)
| |...-.+|. .-|++|+|.==|..=| ..+++.-.. -..|-.. +.|-+= +|-+++||.+.++..++--+
T Consensus 182 g~~~~~~~~~l~----~~~~i~~v~ftGs~~~g~~v~~~aa~~-~~~~~lE-lGGk~~--~iV~~dadl~~aa~~iv~~~ 253 (448)
T TIGR01780 182 GSRAKEVGKVLC----TSPLVRKISFTGSTNVGKILMKQSAST-VKKVSME-LGGNAP--FIVFDDADIDQAVEGAMASK 253 (448)
T ss_pred CCCchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhc-CCceEee-cCCCCe--eEECCCCCHHHHHHHHHHHH
Confidence 3 333222331 2377888754443332 211211000 0013333 234443 34456689988777755322
Q ss_pred Cc----CCCC-ceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhc---------
Q 013679 259 EH----GPDS-QVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALG--------- 302 (438)
Q Consensus 259 EH----d~~a-~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~--------- 302 (438)
=. --.+ +-++| .++.. +++.+.+.+.++.+. . .+.+.++.+
T Consensus 254 f~~sGQ~C~a~~rv~V--~~~i~-d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg 330 (448)
T TIGR01780 254 FRNAGQTCVCANRLYV--HDGIY-DEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGG 330 (448)
T ss_pred HHhcCCcccCCceeec--hHHHH-HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 11 1122 23333 33343 555555555544432 0 011122210
Q ss_pred -----------------------------CC---eEEEeCCHHHHHHHhhhhcccc---ceecccChH---HHHhhcccc
Q 013679 303 -----------------------------HS---FMVFARDMLEGISFSNLYAPEH---LIVNVKDAE---KWESIIENA 344 (438)
Q Consensus 303 -----------------------------~g---~ii~v~~l~ea~~~~N~~APEH---Lel~~~~p~---~~l~~i~nA 344 (438)
.| .|+-++|.|||++++|.- ++ ..|.++|.. .+..+++ +
T Consensus 331 ~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~--~~gL~~~vfs~d~~~~~~~~~~l~-~ 407 (448)
T TIGR01780 331 KRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDT--EVGLAAYFFSRDLATIWRVAEALE-Y 407 (448)
T ss_pred CcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCC--CcCceEEEECCCHHHHHHHHHhCC-c
Confidence 01 234478999999999974 44 456677764 4666665 7
Q ss_pred cccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccc
Q 013679 345 GSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLK 387 (438)
Q Consensus 345 GaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK 387 (438)
|.+++..... +| -.+|-+| +.|+.|.-+++.|++
T Consensus 408 G~v~iN~~~~---~~------~~~pfGG~k~SG~G~~~g~~~~~~~~~ 446 (448)
T TIGR01780 408 GMVGINTGLI---SN------VVAPFGGVKQSGLGREGSKYGIEEYLE 446 (448)
T ss_pred cEEEECCCCC---CC------CCCCCCCcccccCCccchHHHHHHHhc
Confidence 9999997532 22 1246555 445555445555543
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=86.70 E-value=52 Score=35.80 Aligned_cols=80 Identities=24% Similarity=0.214 Sum_probs=54.0
Q ss_pred EEEeCCHHHHHHHhhhhccccc--eecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccc
Q 013679 306 MVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYAR 375 (438)
Q Consensus 306 ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR 375 (438)
|+.++|+|||++++|.. +-.| .|.++|.. .+..+++ +|.||+...+..... ++-+|- +|..|
T Consensus 401 v~~~~~~deai~~~N~~-~~gLsa~V~t~d~~~a~~~~~~l~-~G~v~IN~~~~~~~~------~~~~PfGG~k~SG~G~ 472 (524)
T PRK09407 401 VYPVADVDEAVERANDT-PYGLNASVWTGDTARGRAIAARIR-AGTVNVNEGYAAAWG------SVDAPMGGMKDSGLGR 472 (524)
T ss_pred EEeeCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHhCC-cceEEECCCCCcCcC------CCCCCCCCccccccCc
Confidence 45588999999999974 4444 77788875 4556664 799999974432211 122344 45677
Q ss_pred cccCcccccccceeeEEE
Q 013679 376 MYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 376 ~~sgLsv~~FlK~~s~~~ 393 (438)
..|..+++.|.+..++..
T Consensus 473 ~~g~~~l~~ft~~k~v~~ 490 (524)
T PRK09407 473 RHGAEGLLKYTESQTIAT 490 (524)
T ss_pred cchHHHHHHhCCeEEEEE
Confidence 777777888888777653
|
|
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.53 E-value=57 Score=35.10 Aligned_cols=256 Identities=20% Similarity=0.190 Sum_probs=138.0
Q ss_pred EEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--ch
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--GG 184 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v--GG 184 (438)
..-.++.|+.-|++..|- -|| +..++..+||-.||..=|+=-+|-. ..... +......+|+. .++.+ ||
T Consensus 127 ~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VvlKPs~~t---p~t~~~l~~l~~~aGlP~gvv~~v~g~ 200 (487)
T PRK09457 127 AAVLRHRPHGVVAVFGPY---NFPGHLPNGHIVPALLAGNTVVFKPSELT---PWVAELTVKLWQQAGLPAGVLNLVQGG 200 (487)
T ss_pred eeEEEEeccEEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEECCCCC---cHHHHHHHHHHHHhCcCcCeEEEEeCC
Confidence 345677999999999995 466 5677889999999987554433321 12222 23455667764 33322 66
Q ss_pred HHHHHHHhhcCCCCCCceEEecCCcHH----HH--HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc
Q 013679 185 AQAISAMAWGTESCPKVEKIFGPGNQY----VT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 258 (438)
Q Consensus 185 AQAIAAlAyGTetIp~VDkIvGPGN~y----V~--~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA 258 (438)
.+.-.+|. .-|+||+|.==|..- |. +|++..-. |... +.|-+=++| |++||.+.+|-.++.-+
T Consensus 201 ~~~~~~L~----~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~----~~lE-lGGk~p~IV--~~dADl~~aa~~i~~~~ 269 (487)
T PRK09457 201 RETGKALA----AHPDIDGLLFTGSANTGYLLHRQFAGQPEKI----LALE-MGGNNPLVI--DEVADIDAAVHLIIQSA 269 (487)
T ss_pred HHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHHhhcCCCc----EEEe-cCCCCeEEE--CCCCCHHHHHHHHHHHH
Confidence 54333333 248899984434422 22 24332110 1111 225453333 67899999888876655
Q ss_pred -CcCCC---C-ceEEEecCchhhHHHHHHHHHHHHhcCC----C------------H---H----HHHHhhcC-------
Q 013679 259 -EHGPD---S-QVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------G---E----FASKALGH------- 303 (438)
Q Consensus 259 -EHd~~---a-~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------~---~----ia~~sl~~------- 303 (438)
.+.-. + .-++|-.|- .+ +++.+.+.+.++.+. . . + .+++++++
T Consensus 270 f~~~GQ~C~a~~rv~V~~~i-~~-d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~g 347 (487)
T PRK09457 270 FISAGQRCTCARRLLVPQGA-QG-DAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLE 347 (487)
T ss_pred hhccCCCCCCCceEEEeccc-cH-HHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 33322 2 234554432 11 444444444443321 0 1 0 11122111
Q ss_pred ------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccc
Q 013679 304 ------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGS 346 (438)
Q Consensus 304 ------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGa 346 (438)
| .|+.++|+|||++++|..--=+ ..|.++|... ++.++ ++|.
T Consensus 348 g~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l-~~G~ 426 (487)
T PRK09457 348 MTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEI-RAGI 426 (487)
T ss_pred CCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC-Ccce
Confidence 1 1233789999999999753222 6778888854 66676 4899
Q ss_pred cccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccce-eeEEEe
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKY-MTVQSL 394 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~-~s~~~~ 394 (438)
+++...+. +.+.-+|-+ |..|..| ....+|++. +.++.+
T Consensus 427 v~iN~~~~--------~~~~~~PfGG~k~SG~G~~~g-~~~~~~~~~k~~~~~~ 471 (487)
T PRK09457 427 VNWNKPLT--------GASSAAPFGGVGASGNHRPSA-YYAADYCAYPMASLES 471 (487)
T ss_pred EEEECCCC--------CCCCCCCCCCcccccCCCCCc-hhHhhheeeeEEEEec
Confidence 99985432 122235555 4455544 344568773 334443
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=85.10 E-value=55 Score=34.60 Aligned_cols=236 Identities=20% Similarity=0.183 Sum_probs=124.7
Q ss_pred ceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhhc--
Q 013679 108 GVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILKA-- 182 (438)
Q Consensus 108 Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~v-- 182 (438)
|...--++.|+.-|+++.|= -||-. .+...+||-.+|..=|+- |+. ........| .....+|+. .++.+
T Consensus 88 ~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VI~K--ps~-~~~~~~~~l~~~~~~ag~P~g~~~~v~ 161 (431)
T cd07095 88 QGRAVLRHRPHGVMAVFGPF---NFPGHLPNGHIVPALLAGNTVVFK--PSE-LTPAVAELMVELWEEAGLPPGVLNLVQ 161 (431)
T ss_pred CceEEEEEecceEEEEECCC---chHHHHHHHHHHHHHhcCCEEEee--CCC-CCcHHHHHHHHHHHHhCcChhHheEEe
Confidence 33444578999999999994 56654 456778999999875544 432 222333333 344556753 33332
Q ss_pred chHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh
Q 013679 183 GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 256 (438)
Q Consensus 183 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa 256 (438)
|+.+.-.+|. .-|.||+|.==|..=+- +|++..- .|...+ -|.+=++| +++||.+..|.+++.
T Consensus 162 g~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~----~~~lEl-gG~~~~iV--~~daDl~~aa~~i~~ 230 (431)
T cd07095 162 GGRETGEALA----AHEGIDGLLFTGSAATGLLLHRQFAGRPGK----ILALEM-GGNNPLVV--WDVADIDAAAYLIVQ 230 (431)
T ss_pred CcHHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHhhccCCC----cEEEEC-CCCCeEEE--CCCCCHHHHHHHHHH
Confidence 4433222222 24778887655554221 1222111 022222 25554443 456898888877663
Q ss_pred -------ccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------H-------HHHHHhh------
Q 013679 257 -------QAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------G-------EFASKAL------ 301 (438)
Q Consensus 257 -------QAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------------~-------~ia~~sl------ 301 (438)
|-=.. .+-++|-.| ... ++..+.+.+.++.+.- + +.+.+++
T Consensus 231 ~~~~~~GQ~C~a--~~rv~V~~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~ 306 (431)
T cd07095 231 SAFLTAGQRCTC--ARRLIVPDG-AVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEP 306 (431)
T ss_pred HHHHhCCCCCCC--CeEEEEcCc-chH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEE
Confidence 32111 233444444 122 3444434333332210 0 0111111
Q ss_pred ----------------------------c---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhhcc
Q 013679 302 ----------------------------G---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESIIE 342 (438)
Q Consensus 302 ----------------------------~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~ 342 (438)
. .| .++-++|++||++++|.. +-- ..|.++|... +..++
T Consensus 307 l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~-~~gL~a~v~s~d~~~a~~~~~~l- 384 (431)
T cd07095 307 LLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANAT-RFGLSAGLLSDDEALFERFLARI- 384 (431)
T ss_pred EeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCC-CCCCeEEEEcCCHHHHHHHHHhC-
Confidence 0 12 344579999999999974 332 5677888753 66666
Q ss_pred cccccccCCCCcccccccccCCCCCCCCCCcc
Q 013679 343 NAGSVFLGEWTPESVGDYASGTNHVLPTYGYA 374 (438)
Q Consensus 343 nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~A 374 (438)
++|.|++...+. +..+-+|.+|.-
T Consensus 385 ~~G~v~iN~~~~--------~~~~~~PfGG~k 408 (431)
T cd07095 385 RAGIVNWNRPTT--------GASSTAPFGGVG 408 (431)
T ss_pred CcceEEECCCCC--------CCCCCCCCCCcc
Confidence 699999996442 233446776653
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=84.06 E-value=64 Score=34.52 Aligned_cols=258 Identities=17% Similarity=0.187 Sum_probs=139.9
Q ss_pred eEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhhc--c
Q 013679 109 VRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILKA--G 183 (438)
Q Consensus 109 v~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~v--G 183 (438)
...-.++.|+.-|++..|= -||-.. +...+||-.+|..=|+ -|+. .-......| .+.+.+|.. .++.+ |
T Consensus 137 ~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~~~~ALaaGN~VVl--Kps~-~~p~~~~~l~~~l~~aGlP~gvv~~v~g 210 (481)
T cd07141 137 FFTYTRHEPVGVCGQIIPW---NFPLLMAAWKLAPALACGNTVVL--KPAE-QTPLTALYLASLIKEAGFPPGVVNVVPG 210 (481)
T ss_pred ceEEEEEeceeEEEEEccC---hhHHHHHHHHHHHHHHcCCEEEE--eCCC-CCcHHHHHHHHHHHHcCcCccceEEEec
Confidence 3445678899999999994 477655 5678899999986443 3432 111222222 344555553 33332 2
Q ss_pred -hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcC-CCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCc
Q 013679 184 -GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQN-SEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 260 (438)
Q Consensus 184 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~-~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH 260 (438)
|...-.+|. .-|+||+|.==|..=+-.. .+..+. .--.|-..+ -|-+= +|-|++||.+..+..++.=+=.
T Consensus 211 ~~~~~~~~L~----~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lEl-GG~~~--~iV~~dADl~~A~~~i~~~~~~ 283 (481)
T cd07141 211 YGPTAGAAIS----SHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLEL-GGKSP--NIVFADADLDYAVEQAHEALFF 283 (481)
T ss_pred CchHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHhhhhcCceEEEEc-CCCCe--EEECCCCCHHHHHHHHHHHHHh
Confidence 333333333 3578998876665433221 111110 000133333 35553 4445568999887776532222
Q ss_pred CC----CCceEEEecCchhhHHHHHHHHHHHHhcCC---------------CH-------HHHHHhh-------------
Q 013679 261 GP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------RG-------EFASKAL------------- 301 (438)
Q Consensus 261 d~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r~-------~ia~~sl------------- 301 (438)
.. .+...++. .++.. +++.+.+.+.++.+. ++ +.++++.
T Consensus 284 ~~GQ~C~a~~rv~V-~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 361 (481)
T cd07141 284 NMGQCCCAGSRTFV-QESIY-DEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361 (481)
T ss_pred cCCCcccCCeEEEE-cHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 21 22223333 33453 666666655444331 00 0111111
Q ss_pred -----------------------c--CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhccccccccc
Q 013679 302 -----------------------G--HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFL 349 (438)
Q Consensus 302 -----------------------~--~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~nAGaiFl 349 (438)
+ .| .|+-++|+|||++++|..- +=...|.++|... +..++ .+|.|++
T Consensus 362 ~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l-~~G~v~i 440 (481)
T cd07141 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNAL-RAGTVWV 440 (481)
T ss_pred CCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhc-CcCeEEE
Confidence 0 12 3445899999999999742 2236777888754 66667 5899999
Q ss_pred CCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 350 GEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 350 G~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
..+.. .+.-+|-+ |..|+.|.-++..|.+..++
T Consensus 441 N~~~~---------~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v 478 (481)
T cd07141 441 NCYNV---------VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTV 478 (481)
T ss_pred CCCCC---------CCCCCCCCCcccCcCCccchHHHHHHHhheEEE
Confidence 96432 12235664 56777777777788776665
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=83.17 E-value=70 Score=34.27 Aligned_cols=250 Identities=20% Similarity=0.199 Sum_probs=138.0
Q ss_pred EEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCc-hhhhc--c-
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVT-HILKA--G- 183 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~-eIy~v--G- 183 (438)
..-.++.|+.-|++..|- -||-. .+..++||-.||+.=|+--+|- -.....+| .+...+|+. .++.+ |
T Consensus 128 ~~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~VIlKps~~---~p~~~~~l~~~~~~aGlP~gvv~~v~g~ 201 (488)
T TIGR02299 128 LNYTVRVPVGPVGLITPW---NAPFMLSTWKIAPALAFGNTVVLKPAEW---SPLTAARLAEIAKEAGLPDGVFNLVHGF 201 (488)
T ss_pred eEEEEEEecceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEECchh---chHHHHHHHHHHHHcCcChhheeEEeCC
Confidence 345667999999999984 35643 3446689999998766543321 11122222 455667764 33332 3
Q ss_pred hHHHHHHHhhcCCCCCCceEEecCCcHHHHH------HHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh--
Q 013679 184 GAQAISAMAWGTESCPKVEKIFGPGNQYVTA------AKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL-- 255 (438)
Q Consensus 184 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~------AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL-- 255 (438)
|.....+|. .-|.||+|.==|..-|-. |+.+. .|-..+ -|-+ -+|-|++||.+..+-.++
T Consensus 202 ~~~~~~~l~----~~~~v~~V~fTGS~~~G~~i~~~aa~~l~-----~~~lEl-GGkn--p~iV~~dAdl~~A~~~i~~~ 269 (488)
T TIGR02299 202 GEEAGKALV----AHPDVKAVSFTGETATGSIIMRNGADTLK-----RFSMEL-GGKS--PVIVFDDADLERALDAVVFM 269 (488)
T ss_pred chHHHHHHh----cCCCcCEEEEECcHHHHHHHHHHHHhcCC-----eEEEEc-CCCC--eEEECCCCCHHHHHHHHHHH
Confidence 322223332 357889887666543321 22111 011122 2333 244445689888766655
Q ss_pred -----hccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHh--------
Q 013679 256 -----SQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKA-------- 300 (438)
Q Consensus 256 -----aQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~s-------- 300 (438)
.|.=. ...-++|- ++.. ++..+.+.+.++.+. . .+.+..+
T Consensus 270 ~~~~~GQ~C~--a~~rv~V~--~~v~-d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~ 344 (488)
T TIGR02299 270 IFSFNGERCT--ASSRLLVQ--ESIA-EDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATIL 344 (488)
T ss_pred HHhccCCCCC--CCcEEEEc--HHHH-HHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 13211 12234442 3343 656655555554441 0 1111111
Q ss_pred ----------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---H
Q 013679 301 ----------------------------------L--G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 336 (438)
Q Consensus 301 ----------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~ 336 (438)
+ + .| .|+-++|.|||++++|..--=| ..|.++|.. .
T Consensus 345 ~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~ 424 (488)
T TIGR02299 345 VGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHR 424 (488)
T ss_pred eCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 1 1 12 2345799999999999774333 578888875 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..+++ +|.|++...+. ++ + -+|-+ |..|+.|..+++.|.+.-++.
T Consensus 425 ~~~~l~-~G~v~iN~~~~---~~----~--~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~ 475 (488)
T TIGR02299 425 VALALE-AGMIWVNSQNV---RH----L--PTPFGGVKASGIGREGGTYSFDFYTETKNVA 475 (488)
T ss_pred HHHhCC-cCeEEECCCCC---CC----C--CCCCCCCccCcCCccchHHHHHHHhceEEEE
Confidence 666775 89999996542 22 1 24664 557887878888998866654
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=82.34 E-value=2.3 Score=47.68 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=56.9
Q ss_pred EEEeCCHHHHHHHhhhhcccc--ceecccCh---HHHHhhcc-ccccccc-CCCCcccccccccCCCCCCCCC-----Cc
Q 013679 306 MVFARDMLEGISFSNLYAPEH--LIVNVKDA---EKWESIIE-NAGSVFL-GEWTPESVGDYASGTNHVLPTY-----GY 373 (438)
Q Consensus 306 ii~v~~l~ea~~~~N~~APEH--Lel~~~~p---~~~l~~i~-nAGaiFl-G~~sp~a~GDY~aGpNHvLPT~-----G~ 373 (438)
|+-++|.|||++++|.- +-- ..|.++|. ..+.++++ ++|.||+ ...+....+ +..++..-+|-+ |.
T Consensus 397 V~~~~~~~eai~~aN~~-~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~-~~~~~~~~~pfGG~k~SG~ 474 (663)
T TIGR02278 397 FFPYGDRAEAARLAARG-GGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAEST-GHGSPLPRLLHGGPGRAGG 474 (663)
T ss_pred EEeeCCHHHHHHHHHcC-CCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCccccccc-CCCCCCCCCCCCCCccCcC
Confidence 34478999999999964 233 56778888 45778887 8999999 642211111 111222224554 56
Q ss_pred cccccC-cccccccceeeEEEeCH
Q 013679 374 ARMYGG-VSLDSFLKYMTVQSLTE 396 (438)
Q Consensus 374 AR~~sg-Lsv~~FlK~~s~~~~s~ 396 (438)
.|..+| .++++|++..+++..+.
T Consensus 475 G~~~g~~~~l~~f~~~k~v~~~~~ 498 (663)
T TIGR02278 475 GEELGGLRSVKHYMQRTAIQGSPW 498 (663)
T ss_pred CCccchHHHHHHhceeEEEEcCHH
Confidence 676554 67888999888886543
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=81.44 E-value=78 Score=33.65 Aligned_cols=222 Identities=14% Similarity=0.154 Sum_probs=117.6
Q ss_pred EEEEEEecceeeEeecCCCCCCchHhh-hhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhhc--c-h
Q 013679 111 CKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILKA--G-G 184 (438)
Q Consensus 111 ~g~r~~Pi~rvG~YVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~v--G-G 184 (438)
.-.++.|+.-|++..|- -||-... ...+||-.+|..=|+--+|-. ..... +..+...+|.. .++.+ | |
T Consensus 127 ~~~~~~P~Gvv~~I~p~---N~P~~~~~~~~~~ALaaGN~VvlKps~~t---p~~~~~l~~~~~~aglP~gv~~~v~g~~ 200 (467)
T TIGR01804 127 SYTIREPLGVCVGIGAW---NYPLQIASWKIAPALAAGNAMVFKPSEIT---PLTALKVAELMEEAGLPDGVFNVVLGKG 200 (467)
T ss_pred EEEEEeeeeEEEEECCC---chHHHHHHHHHHHHHhcCCEEEeeCCccC---cHHHHHHHHHHHHcCcCcCcEEEEeCCc
Confidence 45778999999999984 4665544 456899999987555433321 12222 22344455543 22221 3 2
Q ss_pred HHHHHHHhhcCCCCCCceEE--ecCCc--HHHH--HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc
Q 013679 185 AQAISAMAWGTESCPKVEKI--FGPGN--QYVT--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA 258 (438)
Q Consensus 185 AQAIAAlAyGTetIp~VDkI--vGPGN--~yV~--~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA 258 (438)
...-.+|. .-|.||+| +|--. ..|. +|+++ . .+-+.+ -|.+=++ -|++||.+..+..++.-+
T Consensus 201 ~~~~~~L~----~~~~v~~V~fTGs~~~g~~v~~~a~~~l-~----~~~lEl-GG~~~~i--V~~dADl~~Aa~~i~~~~ 268 (467)
T TIGR01804 201 AEVGEPLV----NHKDVAKVSFTGGVPTGKKIMAAAADHL-K----HVTMEL-GGKSPLI--VFDDADLELAVDQAMNGN 268 (467)
T ss_pred HHHHHHHh----cCCCCCEEEEECcHHHHHHHHHHHHhcC-C----cEEEec-CCCCeeE--ECCCCCHHHHHHHHHHHH
Confidence 33222232 34779999 55422 2222 22221 1 133332 2555433 356789888776654432
Q ss_pred CcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C----HHH---HHHh------------
Q 013679 259 EHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R----GEF---ASKA------------ 300 (438)
Q Consensus 259 EHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r----~~i---a~~s------------ 300 (438)
=... .+...++.. ++.. +++.+.+.+.++.+. . ..+ +..+
T Consensus 269 ~~~~GQ~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~ 346 (467)
T TIGR01804 269 FFSAGQVCSNGTRVFVH-NKIK-EKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGK 346 (467)
T ss_pred HHhcCCCCCCCCEEEEc-HHHH-HHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCC
Confidence 2111 222233333 3343 666666655554431 0 000 0110
Q ss_pred ---------------------------h--c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhccc
Q 013679 301 ---------------------------L--G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIEN 343 (438)
Q Consensus 301 ---------------------------l--~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~n 343 (438)
+ + .| .++.++|.|||++++|..--=| ..|.++|.. .+..++ .
T Consensus 347 ~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l-~ 425 (467)
T TIGR01804 347 RPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQL-K 425 (467)
T ss_pred ccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC-C
Confidence 1 1 13 3456899999999999853222 567788874 466677 5
Q ss_pred ccccccCCCC
Q 013679 344 AGSVFLGEWT 353 (438)
Q Consensus 344 AGaiFlG~~s 353 (438)
+|.|++..++
T Consensus 426 ~G~v~iN~~~ 435 (467)
T TIGR01804 426 AGTVWINDFH 435 (467)
T ss_pred cceEEECCCC
Confidence 7999999753
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=81.28 E-value=2.9 Score=44.31 Aligned_cols=251 Identities=20% Similarity=0.209 Sum_probs=134.4
Q ss_pred EEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-----H-HHHHHcCCc-hhhhc--
Q 013679 112 KRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-----L-YCAKKAGVT-HILKA-- 182 (438)
Q Consensus 112 g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-----L-~AA~l~Gv~-eIy~v-- 182 (438)
-.++.|+.-|+++.|= .+|+ .+++...+||-.||..=|+-.+|-. ..... + .+...+|+. .++.+
T Consensus 115 ~~~~~P~GVv~~I~p~-n~P~-~~~~~~~~~ALaaGN~VIlKps~~~----p~~~~~~~~~~~~~l~~aGlP~gvv~~v~ 188 (465)
T cd07098 115 RVEYEPLGVVGAIVSW-NYPF-HNLLGPIIAALFAGNAIVVKVSEQV----AWSSGFFLSIIRECLAACGHDPDLVQLVT 188 (465)
T ss_pred EEEEecceeEEEEccc-CcHH-HHHHHHHHHHHHcCCEEEEECCCcC----cHHHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 3557999999999993 2332 3445567799999987665443321 21221 1 223456663 44443
Q ss_pred chHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhh
Q 013679 183 GGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLS 256 (438)
Q Consensus 183 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLa 256 (438)
|+.+.-.+|. .-|.||+|+==|..=+ ++++++. . |-. -+.|-+=+ |-|++||.+.++-.++.
T Consensus 189 g~~~~~~~L~----~~~~v~~V~ftGs~~~g~~v~~~a~~~~~-~----~~l-elgG~~~~--iV~~dadl~~a~~~i~~ 256 (465)
T cd07098 189 CLPETAEALT----SHPVIDHITFIGSPPVGKKVMAAAAESLT-P----VVL-ELGGKDPA--IVLDDADLDQIASIIMR 256 (465)
T ss_pred CCHHHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcCC-e----EEE-ECCCCCeE--EECCCCCHHHHHHHHHH
Confidence 4333323333 2577888766665432 1121110 0 111 12344444 44445888887766653
Q ss_pred ccCcC----CCC-ceEEEecCchhhHHHHHHHHHHHHhcCCCH----------------------HHHH-----------
Q 013679 257 QAEHG----PDS-QVVLVIVGDGVDLDAIEQEISKQCQSLPRG----------------------EFAS----------- 298 (438)
Q Consensus 257 QAEHd----~~a-~~vLvt~s~~la~~~V~~ei~~ql~~l~r~----------------------~ia~----------- 298 (438)
-+=.. -.+ +-++| .++.. +++.+.+.+.+..+.-. +.+.
T Consensus 257 ~~~~~~GQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~ 333 (465)
T cd07098 257 GTFQSSGQNCIGIERVIV--HEKIY-DKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLA 333 (465)
T ss_pred HHHhcCCCCCcCCcEEEE--cHHHH-HHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEe
Confidence 22111 122 23444 33343 55655555544333100 0000
Q ss_pred ----------------------------Hhh--c-CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHh
Q 013679 299 ----------------------------KAL--G-HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WES 339 (438)
Q Consensus 299 ----------------------------~sl--~-~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~ 339 (438)
.-+ + .| .++.++|+|||++++|.. +.. ..|.++|... ++.
T Consensus 334 gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gLsa~i~t~d~~~~~~~~~ 412 (465)
T cd07098 334 GGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANST-EYGLGASVFGKDIKRARRIAS 412 (465)
T ss_pred CCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHHH
Confidence 001 1 12 345589999999999986 333 4677887754 666
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+++ +|.||++.+... +.+..+|-+ |..|+.|.-+++.|++..++.
T Consensus 413 ~l~-~g~v~iN~~~~~-------~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 462 (465)
T cd07098 413 QLE-TGMVAINDFGVN-------YYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVT 462 (465)
T ss_pred hCC-cceEEECCCCCC-------CCCCCCCcCccccccCCccChHHHHHHhheeEEEE
Confidence 776 799999974321 111124554 457777777888888866653
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=80.72 E-value=90 Score=33.87 Aligned_cols=332 Identities=16% Similarity=0.197 Sum_probs=172.2
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+.+.++++-|+=....++...+...+.. ..| + ....+-|+.++++++++....... ..
T Consensus 25 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~---~~E-----v-~~~~~~~~~~~~~~~~~~~~~~~~-~~ 94 (484)
T PLN02203 25 RSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAY---RDE-----V-GVLTKSANLALSNLKKWMAPKKAK-LP 94 (484)
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH---HHH-----H-HHHHHHHHHHHHHHHHHhcccccc-CC
Confidence 3344555667888888888888766666666543210000 001 1 133344566666666664322111 00
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHhhh-hcccceecCCCeEEEecCCCCCCCCCHHHHHHHHH----cCCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALM-LSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKK----AGVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM-~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l----~Gv~ 177 (438)
.. ..+...-.+..|+.-|+++.|- -||-.+.+ ..+||-.||..=|+- |+. .......+|..+-. .|+=
T Consensus 95 ~~-~~~~~~~~~reP~GVv~~I~pw---N~P~~~~~~~i~~ALaaGN~VVlK--ps~-~tp~~~~~l~~~~~~~lP~gvv 167 (484)
T PLN02203 95 LV-AFPATAEVVPEPLGVVLIFSSW---NFPIGLSLEPLIGAIAAGNAVVLK--PSE-LAPATSAFLAANIPKYLDSKAV 167 (484)
T ss_pred cc-cCCceeEEEEecccEEEEEcCC---cchHHHHHHHHHHHHHcCCEEEEE--CCC-cChHHHHHHHHHHHHhCCcCEE
Confidence 10 1233334567899999999993 46644444 468999999875544 431 11111222222211 1332
Q ss_pred hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEec-CCCCHHHH
Q 013679 178 HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIAD-IYASPVHI 250 (438)
Q Consensus 178 eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD-~~Anp~~v 250 (438)
.+. .||...-.+|. .. ++|+|.==|..=|- +|+++.- |-. -+-|-+=++|..| ++||.+..
T Consensus 168 ~vv-~g~~~~~~~l~---~~--~vd~v~fTGS~~~G~~v~~~aa~~l~~-----v~l-ElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 168 KVI-EGGPAVGEQLL---QH--KWDKIFFTGSPRVGRIIMTAAAKHLTP-----VAL-ELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred EEE-eCCHHHHHHHH---hC--CCCEEEEECCHHHHHHHHHHHHhcCCC-----EEE-EecCCCeEEEccCCCCCCHHHH
Confidence 232 35655444443 22 38888544443332 2222210 211 2336555555544 37899887
Q ss_pred HHhhhhccCc---CC---CCc-eEEEecCchhhHHHHHHHHHHHHhcCC----CH-----------------HHHHH---
Q 013679 251 AADLLSQAEH---GP---DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----RG-----------------EFASK--- 299 (438)
Q Consensus 251 AaDLLaQAEH---d~---~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r~-----------------~ia~~--- 299 (438)
+-.++. +-= .. .|. -++| .+++. +++.+.+...++.+. +. +.++.
T Consensus 236 a~~i~~-~~f~~~aGQ~C~a~~rv~V--~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ 311 (484)
T PLN02203 236 VNRIVG-GKWGSCAGQACIAIDYVLV--EERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRV 311 (484)
T ss_pred HHHHHH-HhcccCCCCccccCCeEEE--cHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence 766663 222 11 121 2344 33453 555554444433321 00 00111
Q ss_pred ------------------------------hhc---CC---eEEEeCCHHHHHHHhhhh-ccccceecccChH---HHHh
Q 013679 300 ------------------------------ALG---HS---FMVFARDMLEGISFSNLY-APEHLIVNVKDAE---KWES 339 (438)
Q Consensus 300 ------------------------------sl~---~g---~ii~v~~l~ea~~~~N~~-APEHLel~~~~p~---~~l~ 339 (438)
.+. .| .|+.++|++||++++|.. .+--..|.++|.. .++.
T Consensus 312 ~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~ 391 (484)
T PLN02203 312 AASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILS 391 (484)
T ss_pred CCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 111 12 345589999999999975 1223456788875 4666
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEEeC
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQSLT 395 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~~s 395 (438)
+++ +|.|++..+.... + +.-+|- +|..|+.|..+++.|++..++..-+
T Consensus 392 ~l~-~G~V~IN~~~~~~------~-~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 392 ETS-SGSVTFNDAIIQY------A-CDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred hCC-cceEEECCccccc------C-CCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 764 8999999753211 0 011333 5678888888999999887776543
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=80.68 E-value=80 Score=33.25 Aligned_cols=250 Identities=19% Similarity=0.216 Sum_probs=134.9
Q ss_pred EEEEEEecceeeEeecCCCCCCchHhh-hhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHcCCc-hhhh--cchH
Q 013679 111 CKRVARSIGSVGLYVPGGTAVLPSTAL-MLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKAGVT-HILK--AGGA 185 (438)
Q Consensus 111 ~g~r~~Pi~rvG~YVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~Gv~-eIy~--vGGA 185 (438)
.--++.|+.-|+++.|- -||-... ...+||-.||+.=|+-.+|- ....... ......+|+. .++. .|+.
T Consensus 90 ~~~~~~P~GvV~~I~P~---N~Pl~~~~~~~~~ALaaGN~VV~Kps~~---~p~~~~~l~~~l~~aglP~gvv~~v~g~~ 163 (429)
T cd07100 90 AYVRYEPLGVVLGIMPW---NFPFWQVFRFAAPNLMAGNTVLLKHASN---VPGCALAIEELFREAGFPEGVFQNLLIDS 163 (429)
T ss_pred EEEEEEeeeEEEEEcCC---chHHHHHHHHHHHHHHcCCEEEEECCCc---chHHHHHHHHHHHHcCCCcCcEEEEeCCc
Confidence 34577999999999994 4665444 35779999998755443321 1122223 3344556654 3333 2333
Q ss_pred HHHHHHhhcCCCCCCceEEecCCcHHH----H--HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhcc-
Q 013679 186 QAISAMAWGTESCPKVEKIFGPGNQYV----T--AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQA- 258 (438)
Q Consensus 186 QAIAAlAyGTetIp~VDkIvGPGN~yV----~--~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA- 258 (438)
....+|. .-|++|+|.==|+.=+ . +|+.+- .+-..+ .|-+= +|-|++||.+.+|-.++.=+
T Consensus 164 ~~~~~l~----~~~~i~~v~fTGs~~~g~~i~~~aa~~~~-----~~~lel-gG~~p--~iV~~daDl~~aa~~i~~~~~ 231 (429)
T cd07100 164 DQVEAII----ADPRVRGVTLTGSERAGRAVAAEAGKNLK-----KSVLEL-GGSDP--FIVLDDADLDKAVKTAVKGRL 231 (429)
T ss_pred hhHHHHh----cCCCCCEEEEECcHHHHHHHHHHHhhcCc-----ceEEec-CCCCe--eEECCCCCHHHHHHHHHHHHH
Confidence 3333332 2477888876665522 1 222211 132332 35553 34456789998887766311
Q ss_pred ---CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------CH-------HHHHHhh------------
Q 013679 259 ---EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------RG-------EFASKAL------------ 301 (438)
Q Consensus 259 ---EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r~-------~ia~~sl------------ 301 (438)
=..-.+...++.. ++.. +++.+.+.++++.+. +. +.+..+.
T Consensus 232 ~~~GQ~C~a~~rv~v~-~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 309 (429)
T cd07100 232 QNAGQSCIAAKRFIVH-EDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKR 309 (429)
T ss_pred hccCCCCCCCeEEEEc-HHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCc
Confidence 1122233333333 3343 555555555554431 00 0011110
Q ss_pred -----------------------c---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChHH---HHhhccccccc
Q 013679 302 -----------------------G---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAEK---WESIIENAGSV 347 (438)
Q Consensus 302 -----------------------~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~~---~l~~i~nAGai 347 (438)
. .| .++.++|.|||++++|.. +.- ..|.++|... +..+++ +|.|
T Consensus 310 ~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~-~~gl~a~v~t~d~~~~~~~~~~l~-~g~v 387 (429)
T cd07100 310 PDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDS-PFGLGGSVFTTDLERAERVARRLE-AGMV 387 (429)
T ss_pred CCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCC-CcCceEEEECCCHHHHHHHHHhCC-cCeE
Confidence 0 01 234478999999999985 332 4777888754 555654 8999
Q ss_pred ccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 348 FLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 348 FlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
++..++.. +.-+|-+ |..|+.|.-++++|.+..++
T Consensus 388 ~iN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 427 (429)
T cd07100 388 FINGMVKS---------DPRLPFGGVKRSGYGRELGRFGIREFVNIKTV 427 (429)
T ss_pred EECCCCCC---------CCCCCcCCccccccCCcchHHHHHHhcceeEE
Confidence 99976521 2225654 56666666677777776554
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=80.24 E-value=87 Score=33.42 Aligned_cols=254 Identities=17% Similarity=0.241 Sum_probs=134.2
Q ss_pred CceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHH-cCCc-hhhh-
Q 013679 107 KGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKK-AGVT-HILK- 181 (438)
Q Consensus 107 ~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l-~Gv~-eIy~- 181 (438)
+|...-.++.|+.-|++..| .-|| ...+...+||-.+|..=|+-.+|- .......| ...+. +|.. .++.
T Consensus 107 ~~~~~~~~~~P~Gvv~~I~P---~N~P~~~~~~~~~~AL~aGN~vvlKps~~---~~~~~~~l~~~~~~aag~P~g~~~~ 180 (455)
T cd07120 107 PGSFSLVLREPMGVAGIIVP---WNSPVVLLVRSLAPALAAGCTVVVKPAGQ---TAQINAAIIRILAEIPSLPAGVVNL 180 (455)
T ss_pred CCceEEEEEecceeEEEECC---CchHHHHHHHHHHHHHHcCCEEEeECCCC---ChHHHHHHHHHHHHhcCCCccceEE
Confidence 45455678899999999999 3566 445557889999998755543331 11222222 23344 4653 2221
Q ss_pred -cc-hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 182 -AG-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 182 -vG-GAQAIAAlAyGTetIp~VDkIvGPGN~------yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
.| |...-.+|. +=|.||+|.==|.. +-.+|+++- . |-+. +-|-+ -+|-+++||.+.+|-.
T Consensus 181 v~g~~~~~~~~l~----~~~~v~~v~fTGs~~~g~~i~~~aa~~~~-~----~~lE-lGG~~--~~IV~~daDl~~aa~~ 248 (455)
T cd07120 181 FTESGSEGAAHLV----ASPDVDVISFTGSTATGRAIMAAAAPTLK-R----LGLE-LGGKT--PCIVFDDADLDAALPK 248 (455)
T ss_pred EecCchhHHHHHh----cCCCCCEEEEECCHHHHHHHHHHHHhcCC-e----EEEE-CCCCC--eeEECCCCCHHHHHHH
Confidence 12 333222232 24778887433333 222333211 0 2221 22444 2344457899988888
Q ss_pred hhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhh------
Q 013679 254 LLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKAL------ 301 (438)
Q Consensus 254 LLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl------ 301 (438)
++.-+=. .-.+...++. .++.. ++..+.+.+.++.+. . .+.+.++.
T Consensus 249 i~~~~~~~~GQ~C~a~~rv~V-~~~i~-~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~ 326 (455)
T cd07120 249 LERALTIFAGQFCMAGSRVLV-QRSIA-DEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEV 326 (455)
T ss_pred HHHHHHHhCCCCCCCCeEEEE-cHHHH-HHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEE
Confidence 7654322 2223333333 33343 555555555544431 0 00011110
Q ss_pred ----------------------------------c-CC---eEEEeCCHHHHHHHhhhhccc--cceecccChHH---HH
Q 013679 302 ----------------------------------G-HS---FMVFARDMLEGISFSNLYAPE--HLIVNVKDAEK---WE 338 (438)
Q Consensus 302 ----------------------------------~-~g---~ii~v~~l~ea~~~~N~~APE--HLel~~~~p~~---~l 338 (438)
+ .| .++.++|.|||++++|.. +- -..|.++|... +.
T Consensus 327 ~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~-~~gLs~~ift~d~~~a~~~~ 405 (455)
T cd07120 327 VLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDT-DYGLAASVWTRDLARAMRVA 405 (455)
T ss_pred EeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCC-CCCceEEEEcCCHHHHHHHH
Confidence 0 02 234478999999999975 22 25677888754 55
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 391 (438)
.++ .+|.|++..++.. +.-+|- +|..|+.|.-+++.|++..++
T Consensus 406 ~~l-~~G~v~iN~~~~~---------~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v 453 (455)
T cd07120 406 RAI-RAGTVWINDWNKL---------FAEAEEGGYRQSGLGRLHGVAALEDFIEYKHI 453 (455)
T ss_pred Hhc-CcceEEECCCCCC---------CCCCCcCCccccccCccchHHHHHHHhceeEE
Confidence 556 4899999975431 112454 445666666677777776554
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 438 | ||||
| 1kae_A | 434 | L-Histidinol Dehydrogenase (Hisd) Structure Complex | 1e-103 | ||
| 1k75_A | 434 | The L-Histidinol Dehydrogenase (Hisd) Structure Imp | 1e-103 | ||
| 4gic_A | 423 | Crystal Structure Of A Putative Histidinol Dehydrog | 9e-54 |
| >pdb|1KAE|A Chain A, L-Histidinol Dehydrogenase (Hisd) Structure Complexed With L- Histidinol (Substrate), Zinc And Nad (Cofactor) Length = 434 | Back alignment and structure |
|
| >pdb|1K75|A Chain A, The L-Histidinol Dehydrogenase (Hisd) Structure Implicates Domain Swapping And Gene Duplication. Length = 434 | Back alignment and structure |
|
| >pdb|4GIC|A Chain A, Crystal Structure Of A Putative Histidinol Dehydrogenase (Target Psi- 014034) From Methylococcus Capsulatus Length = 423 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 438 | |||
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 0.0 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A Length = 434 | Back alignment and structure |
|---|
Score = 639 bits (1651), Expect = 0.0
Identities = 202/432 (46%), Positives = 271/432 (62%), Gaps = 8/432 (1%)
Query: 4 YRLSELTHAEVQSLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKV 62
+ T + + L RP I S SI V+ I+D+V+ RGD ++++Y+ +FDK + +
Sbjct: 7 IDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTAL 66
Query: 63 VENVSELPD--PELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
+ E+ L +K+A VA NI FH AQK VE GVRC++V R + S
Sbjct: 67 KVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVAS 126
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLY+PGG+A L ST LML+ PA IAGCK VVL +PP I E+LY A+ GV +
Sbjct: 127 VGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP----IADEILYAAQLCGVQDVF 182
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
GGAQAI+A+A+GTES PKV+KIFGPGN +VT AK + +IDMPAGPSEVLVI
Sbjct: 183 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVI 242
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD A+P +A+DLLSQAEHGPDSQV+L+ + + + + +Q LPR E A +A
Sbjct: 243 ADSGATPDFVASDLLSQAEHGPDSQVILLTPAADM-ARRVAEAVERQLAELPRAETARQA 301
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L S ++ +D+ + + SN Y PEHLI+ ++A + I +AGSVFLG+W+PES GDY
Sbjct: 302 LNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDY 361
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGY + L F K MTVQ L++EG L + T+A E L AHK
Sbjct: 362 ASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKN 421
Query: 421 AVTFRLQDIEAR 432
AVT R+ ++ +
Sbjct: 422 AVTLRVNALKEQ 433
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 1e-05
Identities = 67/475 (14%), Positives = 139/475 (29%), Gaps = 150/475 (31%)
Query: 44 DASVKDYTERFDKVKLEKVVENVSELPDPEL-------------DAAVKEAFDVAYNNIY 90
+ KD + + ++ ++++ D + V++ + Y
Sbjct: 32 NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY 91
Query: 91 AFHLAQKSAETSVENMKGVR-CKRVARSIGSVGLYVPGGTAVLPS-----TALMLSVPAQ 144
F ++ E +M ++ R ++ + L AL+ PA+
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 145 I------AGC-KTVVLATPPSQDGSICK-EVLYCAKKAGVTHILKAGGAQAISAMAWGTE 196
G KT +A +C + C + L
Sbjct: 152 NVLIDGVLGSGKT-WVA------LDVCLSYKVQCKMDFKI-FWLNLK------------- 190
Query: 197 SCPKVEKIFGPGNQ-YVTAAKMILQNSEAMISIDMPAG---------------PSEVLVI 240
+C E + + S+ +I + + +LV+
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 241 ADIYASPVHIAA-----------------DLLSQAEHGPDSQVVLVIVGDGVDLDAIEQE 283
++ + A D LS A + + L + D ++
Sbjct: 251 LNVQ-NAKAWNAFNLSCKILLTTRFKQVTDFLSAATT---THISLDHHSMTLTPDEVKSL 306
Query: 284 ISK----QCQSLPRGEFASKALGHSFMV---FARDMLEGISFSNLYAPEHLIVNVKDAEK 336
+ K + Q LPR + L + A + +G++ + + +H+ + +K
Sbjct: 307 LLKYLDCRPQDLPR-----EVLTTNPRRLSIIAESIRDGLATWDNW--KHV-----NCDK 354
Query: 337 WESIIEN---------------AGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVS 381
+IIE+ SVF P S H+ PT + ++ V
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVF-----PPSA--------HI-PTILLSLIWFDVI 400
Query: 382 -------LDSFLKYMTVQSLTEEGLKKL-----GPYVATMAEIEGLEA-HKRAVT 423
++ KY SL E+ K+ Y+ ++E A H+ V
Sbjct: 401 KSDVMVVVNKLHKY----SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 3e-05
Identities = 63/492 (12%), Positives = 128/492 (26%), Gaps = 200/492 (40%)
Query: 13 EVQSLKARPRIDFSSIFSMVHP----IVDDVRNRGDASVKDYTERFDKVKLEKVVENVSE 68
+ S++A R S + ++ +V+N K
Sbjct: 226 RIHSIQAELRRLLKS---KPYENCLLVLLNVQNA------------------KAW----- 259
Query: 69 LPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCK-----R---VARSIGS 120
AF+ + CK R V + +
Sbjct: 260 -----------NAFN-------------------------LSCKILLTTRFKQVTDFLSA 283
Query: 121 VGLYVPGGTAVLPSTAL----MLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGV 176
+ S L + S+ + C+ L P + +
Sbjct: 284 ATTTHI--SLDHHSMTLTPDEVKSLLLKYLDCRPQDL---PRE---VLT----------- 324
Query: 177 THILKAGGAQAISAMA------------WGTESCPKVEKIFGPGNQYVTAAKMILQNSEA 224
T+ +S +A W +C K+ I + L E
Sbjct: 325 TNPR------RLSIIAESIRDGLATWDNWKHVNCDKLTTII----------ESSLNVLEP 368
Query: 225 --------MISIDMPAG---PSEVLVI---ADIYASPVHIAADL--LSQAEHGPDSQVVL 268
+S+ P P+ +L + I + + + L S E P
Sbjct: 369 AEYRKMFDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST-- 425
Query: 269 VIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMV-------------FARDMLEG 315
+ + +I E+ + ++ AL H +V L+
Sbjct: 426 ------ISIPSIYLELKVKLENEY-------AL-HRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 316 ISFSNL-YAPEHLIVNVKDAEKWESIIENAGSVFLG-EWTPESV---GDYASGTNHVLPT 370
+S++ + HL N++ E+ VFL + + + + + +L T
Sbjct: 472 YFYSHIGH---HLK-NIEHPERMTLFRM----VFLDFRFLEQKIRHDSTAWNASGSILNT 523
Query: 371 YGYARMYGGVSLDSFLKYMTVQSLT-EEGLKKLGPYVATMAEIEGLEAHKRAVTFRLQD- 428
+ Y Y+ E + + ++ + E + + L
Sbjct: 524 LQQLKFYK--------PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAE 575
Query: 429 -----IEA-RQV 434
EA +QV
Sbjct: 576 DEAIFEEAHKQV 587
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 438 | |||
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 97.47 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 97.35 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 97.18 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 97.09 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 97.02 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 96.98 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 96.93 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 96.82 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 96.79 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 96.72 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 96.67 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 96.66 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 96.63 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 96.62 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 96.45 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 96.45 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 96.4 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 96.37 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 96.34 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 96.32 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 96.22 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 96.12 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 96.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 95.97 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 95.94 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 95.86 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 95.78 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 95.67 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 95.66 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 95.66 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 95.56 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 95.54 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 95.52 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 95.43 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 95.35 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 95.17 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 95.06 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 95.05 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 94.53 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 94.41 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 94.19 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 94.05 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 94.03 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 93.88 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 93.79 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 93.68 | |
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 90.71 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 90.47 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 88.64 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 82.25 |
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-167 Score=1279.36 Aligned_cols=420 Identities=48% Similarity=0.776 Sum_probs=404.6
Q ss_pred eEEEcCCCCHHHHHHHhcCCCC-CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHH
Q 013679 2 KSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAV 78 (438)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~R~~~-~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~ 78 (438)
.+++|...+...+..++.|+.. +..++.++|++||++||++||+||++||+|||++++++|+||++||++| ++|+++
T Consensus 5 ~~~~~~~~~~~~~~~l~~r~~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~~~~~~ 84 (434)
T 1kae_A 5 TIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDEL 84 (434)
T ss_dssp SEEEGGGSCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCHHHHHHHHHHSCHHH
T ss_pred hhhccccCCHHHHHHHhcCcccccHHHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCHHHHHHHHHhCCHHH
Confidence 4667777777777777777655 5579999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 79 KEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 79 ~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
++||+.|++||++||++|++++|.++..+|++|||||+||+|||||||||+++|||||||++||||||||++|||||||
T Consensus 85 ~~ai~~A~~nI~~fH~~Q~~~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp- 163 (434)
T 1kae_A 85 KQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPP- 163 (434)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECS-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCC-
Confidence 9999999999999999999999888888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHh---cCCCCcccccCCCCCc
Q 013679 159 QDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSEAMISIDMPAGPS 235 (438)
Q Consensus 159 ~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v---~~~~~~VgID~~AGPS 235 (438)
++||.+|+||++|||||||++|||||||||||||||||||||||||||+||++|||+| ++ .|||||+||||
T Consensus 164 ---~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G---~VgIDm~AGPS 237 (434)
T 1kae_A 164 ---PIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD---GAAIDMPAGPS 237 (434)
T ss_dssp ---SCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT---SCEESCCCCCC
T ss_pred ---CCCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC---ccccCCCCCCc
Confidence 5999999999999999999999999999999999999999999999999999999988 55 59999999999
Q ss_pred eEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHH
Q 013679 236 EVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEG 315 (438)
Q Consensus 236 EvlIiAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea 315 (438)
||+||||++|||+|||+||||||||||+|++||||+|++|+ ++|.++|++||+.|||++|+++||++..+|+|+|++||
T Consensus 238 EilViAD~tAnp~~vAaDLLsQAEHd~~a~aiLvT~s~~la-~~V~~ev~~ql~~lpr~~ia~~sl~~~~ii~v~~l~ea 316 (434)
T 1kae_A 238 EVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQC 316 (434)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHHTTCTTHHHHHHHHTTCEEEECSSHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHcCeEEEECCHHHH
Confidence 99999999999999999999999999999999999999996 99999999999999999999999985599999999999
Q ss_pred HHHhhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeC
Q 013679 316 ISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLT 395 (438)
Q Consensus 316 ~~~~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s 395 (438)
++++|+||||||||+++||++|+++|+|||+||||+||||++|||++||||||||+|+|||+|||||+||||++|+|+||
T Consensus 317 ~~~~N~~APEHLel~~~dp~~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s 396 (434)
T 1kae_A 317 VEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELS 396 (434)
T ss_dssp HHHHHHHCCSEEEEESTTHHHHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEEEEEC
T ss_pred HHHHHHhhhHhhhhhhcCHHHHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCceeccCCCcHHhccceeeEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhCCHHHHHHHHHHHHhh
Q 013679 396 EEGLKKLGPYVATMAEIEGLEAHKRAVTFRLQDI 429 (438)
Q Consensus 396 ~~~~~~~~~~~~~lA~~EGL~aHa~sv~~R~~~~ 429 (438)
++|++++++++.+||++|||++|++|+++|+++.
T Consensus 397 ~~~l~~l~~~~~~lA~~EGL~aHa~av~~R~~~~ 430 (434)
T 1kae_A 397 KEGFSALASTIETLAAAERLTAHKNAVTLRVNAL 430 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999754
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-162 Score=1240.92 Aligned_cols=410 Identities=35% Similarity=0.532 Sum_probs=357.0
Q ss_pred CeEEEcCCCCHH-HHHHHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC---ceeeCCCCCCCC--CC
Q 013679 1 MKSYRLSELTHA-EVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE---KVVENVSELPDP--EL 74 (438)
Q Consensus 1 m~~~~~~~~~~~-~~~~~l~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~---~l~V~~~e~~~a--~l 74 (438)
|++++..+.++. ++.+++.|+..++.++.++|++||++||++||+||++||+|||+++++ .|+||++||++| .+
T Consensus 7 ik~L~~~~~~f~~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l 86 (423)
T 4gic_A 7 IKRLYTGDADFASQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQAL 86 (423)
T ss_dssp CEEEETTCTTHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTS
T ss_pred eEEecCCCCCHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhC
Confidence 566777766654 468889998888999999999999999999999999999999999764 599999999998 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEe
Q 013679 75 DAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLA 154 (438)
Q Consensus 75 ~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~ 154 (438)
|+++++||+.|++||++||++|++++|.+++.+|+++||||+||+|||||||||+|+|||||||++||||||||++||||
T Consensus 87 ~~~~~~ai~~A~~~I~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~ 166 (423)
T 4gic_A 87 PAEQAKALREAAERIRAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMA 166 (423)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCC
Q 013679 155 TPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGP 234 (438)
Q Consensus 155 TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGP 234 (438)
||| ++|++||.+|+||++|||+|||++|||||||||||||||||||||||||||+||++|||+|++ .|||||+|||
T Consensus 167 tPp-~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~AGP 242 (423)
T 4gic_A 167 VPA-PRGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMVAGP 242 (423)
T ss_dssp CCC-GGGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCCCCC
T ss_pred cCC-CCCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCccccccc
Confidence 999 689999999999999999999999999999999999999999999999999999999998876 4999999999
Q ss_pred ceEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEEeCCHH
Q 013679 235 SEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDML 313 (438)
Q Consensus 235 SEvlIiAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~v~~l~ 313 (438)
|||+||||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+ +|.+|+|+|++
T Consensus 243 SEilViAD~~a~p~~vAaDLlsQAEHd~~a~~iLvT~s~~la-~~V~~~i~~~l~~l~r~~i~~~sl~~~g~ii~v~~~~ 321 (423)
T 4gic_A 243 SEILVISDGRTDPDWIAMDLFSQAEHDEDAQAILISPDAAHL-EAVQASIERLLPGMERAEVIRTSLERRGGMILVDDLE 321 (423)
T ss_dssp CEEEEEECSCSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHGGGCTTHHHHHHHHHHHCEEEECSSHH
T ss_pred ceEEEEeCCCCCHHHHHHHHHHhhccCCCCeEEEEeCcHHHH-HHHHHHHHHHHhhCccHHHHHHHHhcCceEEEEeehH
Confidence 999999999999999999999999999999999999999996 9999999999999999999999998 69999999999
Q ss_pred HHHHHhhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 314 EGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 314 ea~~~~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
||++++|+||||||||+++||++|+++|+|||+||||+||||++|||++||||||||+|+|||+|||||+||||++|+|+
T Consensus 322 ea~~~~N~~APEHLel~~~~~~~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~~~ 401 (423)
T 4gic_A 322 QAAAVANRIAPEHLELSVESPEVLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIY 401 (423)
T ss_dssp HHHHHHHHHCCSEEEEESSCHHHHGGGCCCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEEEEC
T ss_pred HHHHHHHhhChHHhhhhhCCHHHHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCHHHHHhhhHHHHHHHHhhCC
Q 013679 394 LTEEGLKKLGPYVATMAEIEGL 415 (438)
Q Consensus 394 ~s~~~~~~~~~~~~~lA~~EGL 415 (438)
+|++|++++++++.+||++|||
T Consensus 402 ~s~~~l~~l~~~~~~lA~~EgL 423 (423)
T 4gic_A 402 CSPDGADQLGRTASLLAWGEGL 423 (423)
T ss_dssp ----------------------
T ss_pred ECHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.031 Score=57.73 Aligned_cols=331 Identities=16% Similarity=0.143 Sum_probs=191.5
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
.+.++..+.++.+-+.++++-|+=....++...+-. ......-...+.+++..+.+..+... .
T Consensus 31 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----------------~e~~~~~~~~~~~~~~~~~~~~~~~g-~ 93 (464)
T 3k9d_A 31 MSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGI----------------WQDKVIKNVFASKHVYNYIKDMKTIG-M 93 (464)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSC----------------HHHHHHHHHHHHHHHHHHHTTCCCSE-E
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCH----------------HHHHHHHHHHHHHHHHHhhhcccccc-e
Confidence 344555666777777777776665444454444210 01111124566677776665443322 1
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHHH--------HHHHHH
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKK 173 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--------L~AA~l 173 (438)
+...+|...-.++.|+.-|++..|- -||- +++..++||-.+|..= ++-|.. ..|.+ ..++..
T Consensus 94 ~~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~V--VlKps~----~ap~t~~~l~~ll~~~~~~ 164 (464)
T 3k9d_A 94 LKEDNEKKVMEVAVPLGVVAGLIPS---TNPTSTVIYKTLISIKAGNSI--VFSPHP----NALKAILETVRIISEAAEK 164 (464)
T ss_dssp EEEETTTTEEEEEEECCEEEEEECS---SSHHHHHHHHHHHHHHTTCEE--EEEECG----GGHHHHHHHHHHHHHHHHH
T ss_pred eccCCCceeEEEEecceEEEEECCC---cChHHHHHHHHHHHHHhCCeE--EEECCc----chHHHHHHHHHHHHHHHHH
Confidence 2223555666788999999999995 4664 4467888999999653 344431 33432 134566
Q ss_pred cCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHh-cCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 174 AGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL-QNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 174 ~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v-~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
+|+.+ ++.+ | |.+.-.+|.= -|.||+|.==|..-|. |... ... .| + -.|+.---+|-|++||.+
T Consensus 165 aG~P~gvv~vv~g~~~~~~~~L~~----~~~vd~I~fTGs~~v~--~~a~~~~k--pv-l--elG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 165 AGCPKGAISCMTVPTIQGTDQLMK----HKDTAVILATGGSAMV--KAAYSSGT--PA-I--GVGPGNGPAFIERSANIP 233 (464)
T ss_dssp TTCCTTSEEECSSCCHHHHHHHHH----CTTEEEEEECSCHHHH--HHHTTSSS--CE-E--EBCCCCCEEEECTTSCHH
T ss_pred hCCCCCeEEEEeCCCHHHHHHHHh----CCCCCEEEEeCChHHH--HHHHhcCC--cE-E--eeCCCCCeEEECCCCCHH
Confidence 77764 3322 3 5666666652 4789999866665442 2222 111 13 3 344444556778889999
Q ss_pred HHHHhhhhccCcCC----CC-ceEEEecCchhhHHHHHHHHHHHHhcC---------------C-----------CHHHH
Q 013679 249 HIAADLLSQAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL---------------P-----------RGEFA 297 (438)
Q Consensus 249 ~vAaDLLaQAEHd~----~a-~~vLvt~s~~la~~~V~~ei~~ql~~l---------------~-----------r~~ia 297 (438)
..|-+++.-.=.+. .| +.+||- ++.. +++.+++.++...+ + ..+-+
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~--~~i~-d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i 310 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVE--RVNK-EAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHI 310 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEE--HHHH-HHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEe--HHHH-HHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHH
Confidence 98888775443332 12 345553 3453 67666666543110 0 11111
Q ss_pred HHhhc----C-----------------------C---eEEEeCCHHHHH----HHhhhhcccc-ceecccChH---HHHh
Q 013679 298 SKALG----H-----------------------S---FMVFARDMLEGI----SFSNLYAPEH-LIVNVKDAE---KWES 339 (438)
Q Consensus 298 ~~sl~----~-----------------------g---~ii~v~~l~ea~----~~~N~~APEH-Lel~~~~p~---~~l~ 339 (438)
.+-++ . | .++.++|+|||+ +++|..--=| ..|.++|.. .+..
T Consensus 311 ~~~~~~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~ 390 (464)
T 3k9d_A 311 ANLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFAL 390 (464)
T ss_dssp HHHTTCCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHH
T ss_pred HHHhhhhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHH
Confidence 11111 1 2 245679999997 7888654434 677888865 4566
Q ss_pred hcccccccccCCCCc-ccccccccCCCCCCCCC----CccccccCcccccccceeeEEEeC
Q 013679 340 IIENAGSVFLGEWTP-ESVGDYASGTNHVLPTY----GYARMYGGVSLDSFLKYMTVQSLT 395 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp-~a~GDY~aGpNHvLPT~----G~AR~~sgLsv~~FlK~~s~~~~s 395 (438)
+++ +|.||+..++. -..|+ ..+.+..||-+ |..++++.+++.+|+..-++.+-.
T Consensus 391 ~l~-~G~v~vN~~~~~~~~g~-~~~~~~~~~~G~G~~G~g~~~~~~~~~~~~~~k~v~~~~ 449 (464)
T 3k9d_A 391 KKP-VSRLLVNTPGALGGIGA-TTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGV 449 (464)
T ss_dssp HSS-EEEEEESSCHHHHHTTS-SSSSCCCSCBBCTGGGTCSCCSBCCGGGSEEEEEEEECC
T ss_pred hCC-EeEEEEECCcccccccc-CCCCCccccccCcCCCCCcCCCCCCHHHheEEEEEEecC
Confidence 665 89999997654 23453 23344455554 667888888999999877776543
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.044 Score=56.34 Aligned_cols=327 Identities=15% Similarity=0.124 Sum_probs=168.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 103 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~ 103 (438)
..++..+.++.+-+.++++.++=..-.++..-+- +.+....-+..+.+.++++...++... .+
T Consensus 27 ~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~----------------~~e~~~~~~~~a~~~~~~~~~~~~~~g-~~ 89 (452)
T 3my7_A 27 SQEQVDKIFRAASLAANQARIPLAQQAVEESGMG----------------IVEDKVIKNHFASEFIYNKYKDEQTCG-IL 89 (452)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCS----------------CHHHHHHHHHHHHHHHHHHHTTCCCSE-EC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHhhhccccc-cc
Confidence 3445556666666666666665444444433321 111111124567777765555443221 11
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH--------HHHHHHc
Q 013679 104 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKKA 174 (438)
Q Consensus 104 ~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--------L~AA~l~ 174 (438)
...++...-.++.|+.-|++.+|- -|| ++++..++||-.+|..=| +-|.. ..|.+ ..++..+
T Consensus 90 ~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~k~~~ALaaGN~VV--lKps~----~tp~~~~~~~~~~~~a~~~a 160 (452)
T 3my7_A 90 EEDDNLGTMTIAEPVGIICGIVPT---TNPTSTAIFKSLISLKTRNGII--FSPHP----RAKNSTNDAAKLVLDAAVAA 160 (452)
T ss_dssp -------CEEEEEECCEEEEEECT---TSTTHHHHHHHHHHHHTTCEEE--EEECG----GGHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCceEEEecCceEEEEEcCC---CChHHHHHHHHHHHHhcCCeEE--EEcCC----CchHHHHHHHHHHHHHHHHc
Confidence 222333345678999999999995 355 455677889999996544 34431 23322 1233457
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
|+.+ ++. -| |.+.-.+|.= -|.||+|.==|..=+. |..... +.--+ .-|+.---+|-|++||.+..
T Consensus 161 G~P~gvv~~v~g~~~~~~~~L~~----~p~v~~V~fTGs~~~~--~~a~~~--~kp~~--~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 161 GAPKDIIGWIDQPSVELSNALMK----HDDIALILATGGPGMV--KAAYSS--GKPAI--GVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHH----CTTCCEEEECSCHHHH--HHHHTS--SSCEE--ECC--CEEEEECTTSCHHHH
T ss_pred CCCcCcEEEEcCCCHHHHHHHHh----CCCccEEEEECcHHHH--HHHHhc--CCCEE--ecCCCCCeEEEeCCCCHHHH
Confidence 7753 332 24 5665555542 5789998755554332 222111 00112 22333445667888999999
Q ss_pred HHhhhhccCcCCC----Cc-eEEEecCchhhHHHHHHHHHH----------------HHhcCC----------CHHHHHH
Q 013679 251 AADLLSQAEHGPD----SQ-VVLVIVGDGVDLDAIEQEISK----------------QCQSLP----------RGEFASK 299 (438)
Q Consensus 251 AaDLLaQAEHd~~----a~-~vLvt~s~~la~~~V~~ei~~----------------ql~~l~----------r~~ia~~ 299 (438)
+.+++.-+=++.- |. .++|-. +.. +++.+++.+ ++.... +..++..
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~--~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~ 307 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVD--EVY-DEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEM 307 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEG--GGH-HHHHHHHHTTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcH--HHH-HHHHHHHHHhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHh
Confidence 9998876555442 22 344432 343 665555443 222110 0111110
Q ss_pred ------------------------hh--c-CC---eEEEeCCHHHHHHHhhhh-----ccccceecccChH---H---HH
Q 013679 300 ------------------------AL--G-HS---FMVFARDMLEGISFSNLY-----APEHLIVNVKDAE---K---WE 338 (438)
Q Consensus 300 ------------------------sl--~-~g---~ii~v~~l~ea~~~~N~~-----APEHLel~~~~p~---~---~l 338 (438)
.+ + .| .++.++|+|||++++|.. -+--..|+++|.. . +.
T Consensus 308 ~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a 387 (452)
T 3my7_A 308 AGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFG 387 (452)
T ss_dssp HTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHH
T ss_pred CCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHH
Confidence 01 1 13 345689999999999997 4566889998843 4 66
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCC------CCCc--cccccCcccccccceeeEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLP------TYGY--ARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP------T~G~--AR~~sgLsv~~FlK~~s~~ 392 (438)
.+++ +|.|++.. |.++|-+-...|+.|| ++.+ --.+..+++.+||...++-
T Consensus 388 ~~l~-~G~V~VN~--~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~ 446 (452)
T 3my7_A 388 DKMK-TARILINI--PTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVA 446 (452)
T ss_dssp HHCC-CSEEEESC--CCC----------------------------CCCCCGGGGEEEEEEE
T ss_pred HhCC-EEEEEECC--CCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEE
Confidence 6775 99999997 4556544444454443 3222 2335668999998665554
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.06 Score=55.31 Aligned_cols=330 Identities=13% Similarity=0.131 Sum_probs=178.5
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE-
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE- 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~- 104 (438)
.+-.+..+.+.+.++++.|+=....++.+.+-.... +++...++..+. ..-+..+++.++.|...-.+......
T Consensus 48 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g--~~ea~~~~~~~~---~~~v~~~~~~l~~~a~~~~~~g~~~~~ 122 (444)
T 4ghk_A 48 AAKNAALEAVARAIERDAGALKAANARDVARAKDKG--LDAAFVDRLTLS---DKALKTMVEGLRQVATLPDPIGEMSNL 122 (444)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC--------CCSHHHHHCCC---TTHHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhcc--chHHHHHHhhcc---HHHHHHHHHHHHHHHhhccccCccCCc
Confidence 344555666667777777765555555554321000 111110000000 01366677778888654332221111
Q ss_pred --ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---HHHH-----HHc
Q 013679 105 --NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LYCA-----KKA 174 (438)
Q Consensus 105 --~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L~AA-----~l~ 174 (438)
..+|...-.++.|+.-|++..|- . |...++-.+||-.||+.= |+-|.. ..|.+ |+-. ..+
T Consensus 123 ~~~~~~~~~~~~~~P~GVV~~I~p~---n-P~~~~~~~~~ALaaGN~V--VlKps~----~tp~t~~~l~~l~~~~l~~a 192 (444)
T 4ghk_A 123 KYRPSGIQVGQMRVPLGVIGIIYES---R-PNVTIDAAALCLKSGNAT--ILRGGS----EALESNTALAKLIGEGLAEA 192 (444)
T ss_dssp EECTTSCEEEEEEEECSEEEEECCS---C-HHHHHHHHHHHHHTTCEE--EEECCG----GGHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCccceEEEeccEEEEEEeCC---C-cHHHHHHHHHHHHcCCEE--EEECCc----cchHHHHHHHHHHHHHHHHc
Confidence 13566677789999999999994 2 667778889999999753 344432 34432 2211 456
Q ss_pred CCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhc--CCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 175 GVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ--NSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 175 Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
|+. .++.+ | |...++.+- .+-|+||+|.=-|..=|- |++.. .. .| +=-+-|=+= +|-|++||.+
T Consensus 193 GlP~gvv~vv~g~~~~~~~~~L---~~~p~vd~V~fTGs~~vg--~~v~~~a~~--pv-~lELGGk~p--~IV~~dADl~ 262 (444)
T 4ghk_A 193 GLPQDTVQVVETADRAAVGRLI---TMTEYVDVIVPRGGKSLI--ERLINEARV--PM-IKHLDGICH--VYVDDRASVT 262 (444)
T ss_dssp TCCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHHH--HHHHHHCCS--CB-CCCCCCCCE--EEECTTCCHH
T ss_pred CCCcccEEEEeCCCHHHHHHHH---hcCCCccEEEEECcHHHH--HHHHHhCCC--CE-EEEcCCcCe--EEECCCCCHH
Confidence 764 34432 3 554444322 134889999877765332 22111 00 01 111233333 4446679999
Q ss_pred HHHHhhhhccCcCC---CCceEEEecCchhhHHHHHHHHHHHHhcCCC--------HHHHHHh------------hc---
Q 013679 249 HIAADLLSQAEHGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSLPR--------GEFASKA------------LG--- 302 (438)
Q Consensus 249 ~vAaDLLaQAEHd~---~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r--------~~ia~~s------------l~--- 302 (438)
..|..++.-+=... .|...++.. ++.. +++.+.+.+.++.+.- ...+..+ +.
T Consensus 263 ~Aa~~i~~~~~~n~G~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~~~~~~~~~~eEi 340 (444)
T 4ghk_A 263 KALTVCDNAKTHRYGTCNTMETLLVA-RGIA-PAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEY 340 (444)
T ss_dssp HHHHHCC---------CCCCCEEEEE-GGGH-HHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCCEECCSGGGTCC-
T ss_pred HHHHHHHHHhcCCCcccCcCceEEEe-HHHH-HHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcccCCCchhhhccc
Confidence 88877664332222 222223332 2343 7777777776665532 2444444 21
Q ss_pred CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCCCcc-
Q 013679 303 HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYA- 374 (438)
Q Consensus 303 ~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~A- 374 (438)
.| .|+.++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++..++.. +.-+|-+|..
T Consensus 341 FGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l-~aG~V~vN~~~~~---------~~~~pfGg~~~ 410 (444)
T 4ghk_A 341 LAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREV-DSASVMVNASTRF---------ADGFEFGLGAE 410 (444)
T ss_dssp --CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHC-CSSEEEEEECGGG---------CSTTTTTCSCC
T ss_pred cCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhC-CcceEEEcCCCcc---------CCCCCcCCccc
Confidence 13 3456899999999999863322 566777765 456666 4999999976541 1235655443
Q ss_pred --------ccccCcccccccceeeEE
Q 013679 375 --------RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 375 --------R~~sgLsv~~FlK~~s~~ 392 (438)
|+.|..+++.|+..-++.
T Consensus 411 sG~g~~~~~~~G~~gl~~~t~~K~v~ 436 (444)
T 4ghk_A 411 IGISNDKLHARGPVGLEGLTSLKYVV 436 (444)
T ss_dssp SEEECCSSSCCEEECGGGGEEEEEEE
T ss_pred ccccCCcccCCChhHHHhhceEEEEE
Confidence 445677888888776654
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.17 Score=52.06 Aligned_cols=318 Identities=13% Similarity=0.146 Sum_probs=177.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc--CCCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK--SAET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~--~~~~ 101 (438)
...+-.+..+++-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|.+... ....
T Consensus 49 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 111 (462)
T 3etf_A 49 SVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-----------------IKQARAEVTKSAALCDWYAEHGPAMLNPE 111 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHhHHHhcCCc
Confidence 3445556677777777777776655555555431 01222234455555555443211 1111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCC
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGV 176 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv 176 (438)
....+|...-.++.|+.-|++..|- -||- ..+..++||-.||+.=|+ -|.. ..|. +......+|+
T Consensus 112 -~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~Vvl--Kps~----~tp~~~~~l~~~l~~agl 181 (462)
T 3etf_A 112 -PTLVENQQAVIEYRPLGVILAIMPW---NFPLWQVLRGAVPILLAGNSYLL--KHAP----NVTGCAQMIARILAEAGT 181 (462)
T ss_dssp -ECSSGGGCEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEEE--ECCT----TCHHHHHHHHHHHHHTTC
T ss_pred -ccCCCCceeEEEeecCcEEEEECCC---chHHHHHHHHHHHHHhcCCEEEE--ECCC----CCcHHHHHHHHHHHHhCC
Confidence 1223455566788999999999995 3443 344457899999985443 3432 3343 2234555676
Q ss_pred ch-hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCH
Q 013679 177 TH-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 247 (438)
Q Consensus 177 ~e-Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp 247 (438)
.. ++. -|+.....+|. +-|+||+|.=-|..=|- +|+.+- .|-..+ -|-+= +|-|++||.
T Consensus 182 P~gv~~vv~g~~~~~~~l~----~~~~v~~v~fTGS~~~g~~i~~~aa~~~~-----~v~lEl-GGk~p--~iV~~dADl 249 (462)
T 3etf_A 182 PAGVYGWVNANNEGVSQMI----NDPRIAAVTVTGSVRAGAAIGAQAGAALK-----KCVLEL-GGSDP--FIVLNDADL 249 (462)
T ss_dssp CBTTEEECCCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----CEEEEC-CCCEE--EEECTTSCH
T ss_pred CcCeEEEEECCHHHHHHHh----cCCCCCEEEEeCCchHHHHHHHHHhccCC-----ceEEEc-CCCCc--cEECCCCCH
Confidence 43 221 35555556654 35899999766654332 222110 022221 14443 444667999
Q ss_pred HHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhh
Q 013679 248 VHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKAL 301 (438)
Q Consensus 248 ~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl 301 (438)
+..+..++.-+=+ .-.+...++.. ++.. +++.+.+.+.++.+. . .+.++.+.
T Consensus 250 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 327 (462)
T 3etf_A 250 ELAVKAAVAGRYQNTGQVCAAAKRFIVE-EGIA-QAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASV 327 (462)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcccCCcEEEEe-hhHH-HHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHH
Confidence 9877776643322 22344444443 3453 666666666665432 0 12222222
Q ss_pred c--------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---H
Q 013679 302 G--------------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 336 (438)
Q Consensus 302 ~--------------------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~ 336 (438)
+ .| .++.++|+|||++++|..--=| ..|.++|.. .
T Consensus 328 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~ 407 (462)
T 3etf_A 328 AEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAE 407 (462)
T ss_dssp HTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHH
T ss_pred HCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 1 12 2355789999999999864333 667788864 5
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..+++ +|.|++..+.. .+.-+|-+ |..|..|..+++.|+..-++.
T Consensus 408 ~~~~l~-aG~v~vN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~ 458 (462)
T 3etf_A 408 MAARLE-CGGVFINGYSA---------SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458 (462)
T ss_dssp HHHHCC-SSEEEESSCCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHhCC-cceEEECCCCC---------CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEE
Confidence 666765 99999997642 12345544 456677777888887766653
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.42 Score=49.66 Aligned_cols=324 Identities=16% Similarity=0.130 Sum_probs=176.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~ 101 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+. +. +.+.-+..+++.++.|.+.... ...
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~g~ 129 (487)
T 2w8n_A 67 VSAKERSSLLRKWYNLMIQNKDDLARIITAESGKP----------------LK-EAHGEILYSAFFLEWFSEEARRVYGD 129 (487)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHGGGCCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33445556667777777777776555555554321 01 1112266777777777653222 111
Q ss_pred eEEe-cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-
Q 013679 102 SVEN-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 178 (438)
Q Consensus 102 ~~~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e- 178 (438)
.... .+|...-.++.|+.-|++..|- .+|+ ...+...+||-.||+.=|+ =|.. .-.... .+......+|...
T Consensus 130 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~~aGlP~g 204 (487)
T 2w8n_A 130 IIHTPAKDRRALVLKQPIGVAAVITPW-NFPS-AMITRKVGAALAAGCTVVV--KPAE-DTPFSALALAELASQAGIPSG 204 (487)
T ss_dssp EECCSCTTCEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEEE--ECCT-TCCHHHHHHHHHHHHHTCCTT
T ss_pred ccccCCCCceeEEEEecceEEEEECCC-cchH-HHHHHHHHHHHHcCCEEEE--ECCC-cchHHHHHHHHHHHHhCCCCC
Confidence 1111 2465666788999999999994 2333 3445678899999985443 3432 111222 2334555667653
Q ss_pred hhhc-----c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCC
Q 013679 179 ILKA-----G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 179 Iy~v-----G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~An 246 (438)
++.+ | |.+.-.+|. .-|.||+|.==|..= -++|+.+. .|-.. +-|-+ -+|-|++||
T Consensus 205 vv~vv~~~~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~--p~iV~~dAD 272 (487)
T 2w8n_A 205 VYNVIPCSRKNAKEVGEAIC----TDPLVSKISFTGSTTTGKILLHHAANSVK-----RVSME-LGGLA--PFIVFDSAN 272 (487)
T ss_dssp SEEECCCCHHHHHHHHHHHT----TCTTEEEEEEEECHHHHHHHHHHHHTTTC-----EEEEE-ECEEE--EEEECTTSC
T ss_pred eEEEEecCCCCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEe-cCCCC--eEEECCCCC
Confidence 3221 5 555445554 358899997333322 22222111 01111 12333 355567799
Q ss_pred HHHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhc-CC---------------CH-------HHHHH
Q 013679 247 PVHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQS-LP---------------RG-------EFASK 299 (438)
Q Consensus 247 p~~vAaDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~-l~---------------r~-------~ia~~ 299 (438)
.+..|-.++.-+=... .+...++.. ++.. ++..+.+.+.++. +. .. +.++.
T Consensus 273 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 350 (487)
T 2w8n_A 273 VDQAVAGAMASKFRNTGQTCVCSNQFLVQ-RGIH-DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350 (487)
T ss_dssp HHHHHHHHHHHHTCCCSCCCSEEEEEEEE-HHHH-HHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccCCEEEEc-ccHH-HHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHH
Confidence 9988777765332222 222333332 2233 5555555555544 31 00 11222
Q ss_pred hhc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH-
Q 013679 300 ALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK- 336 (438)
Q Consensus 300 sl~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~- 336 (438)
+.+ .| .++.++|+|||++++|..- +--..|.++|...
T Consensus 351 a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a 430 (487)
T 2w8n_A 351 AVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430 (487)
T ss_dssp HHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHH
Confidence 210 01 2344789999999999852 2236677888754
Q ss_pred --HHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 337 --WESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 --~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++.++ .+|.|++..++.. +..+|- +|..|+.|..+++.|+..-++.
T Consensus 431 ~~~~~~l-~aG~v~vN~~~~~---------~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~ 483 (487)
T 2w8n_A 431 WRVAEQL-EVGMVGVNEGLIS---------SVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483 (487)
T ss_dssp HHHHHHS-CSSEEEESCSCCC---------CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEE
T ss_pred HHHHHhC-CeeeEEEcCCCCC---------CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEE
Confidence 56666 5999999975432 112554 4567888888899998877764
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.3 Score=51.35 Aligned_cols=322 Identities=15% Similarity=0.100 Sum_probs=180.6
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCCce
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAETS 102 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q--~~~~~~ 102 (438)
..+-.+..+.+.+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.... +...+.
T Consensus 85 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~ 147 (521)
T 4e4g_A 85 PQRRARVFMKFVQLLNDNMNELAEMLSREHGKTI-----------------DDAKGDIVRGLEVCEFVIGIPHLQKSEFT 147 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCH-----------------HHHHHHHHHHHHHHHHHHTHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3444555666666667776665555555544321 111223566677777665421 111222
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e 178 (438)
....+|...-.++.|+.-|++..|- .+|+- ..+.-.+||-.||+.=| +-|.. ..|. +......+|+.+
T Consensus 148 ~~~~~~~~~~~~~~P~GVV~~I~Pw-N~P~~-~~~~~~a~ALaaGN~VV--lKpse----~tp~t~~~l~~l~~eaGlP~ 219 (521)
T 4e4g_A 148 EGAGPGIDMYSIRQPVGIGAGITPF-NFPGM-IPMWMFAPAIACGNAFI--LKPSE----RDPSVPIRLAELMIEAGLPA 219 (521)
T ss_dssp EEEETTEEEEEEEEECCEEEEECCS-SCTTH-HHHHHHHHHHHTTCEEE--EECCT----TSTHHHHHHHHHHHHTTCCT
T ss_pred ccCCCCcceeEEEcCCcEEEEECCC-cchHH-HHHHHHHHHHHcCCEEE--EECCC----cchHHHHHHHHHHHHhCCCc
Confidence 2234577777889999999999994 33332 34456789999997544 33432 2332 223455666642
Q ss_pred -hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 -Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. -|+.....+|. .-|.||+|.==|..=| ++|+++.- |-.. +-|-+= +|-|++||.+.
T Consensus 220 gvv~vv~g~~~~~~~L~----~~p~vd~I~FTGS~~vG~~i~~~aa~~lkp-----v~lE-LGGk~p--~IV~~dADl~~ 287 (521)
T 4e4g_A 220 GILNVVNGDKGAVDAIL----THPDIAAVSFVGSTPIARYVYGTAAMNGKR-----AQCF-GGAKNH--MIIMPDADLDQ 287 (521)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTCE-----EEEE-CCCCEE--EEECTTSCHHH
T ss_pred CeEEEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhhcCCC-----eeec-CCCCCe--EEEcCCCCHHH
Confidence 332 25555556665 2588999976665422 23332210 1111 123333 44566799998
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 303 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~ 303 (438)
.|-.++.-+ =.--.+...++....+.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 288 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 366 (521)
T 4e4g_A 288 AANALIGAGYGSAGERCMAISVAVPVGEETA-NRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQ 366 (521)
T ss_dssp HHHHHHHHHHGGGGCCTTSEEEEEEBSHHHH-HHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCeEEEEeCchHH-HHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 777665322 122345555555444354 7777777777766531 1222222211
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH--
Q 013679 304 ------------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE-- 335 (438)
Q Consensus 304 ------------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~-- 335 (438)
| .|+-++|+|||++++|..--=| ..|.++|..
T Consensus 367 Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a 446 (521)
T 4e4g_A 367 GAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAA 446 (521)
T ss_dssp TCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHH
T ss_pred CCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 1 1233689999999999843222 556777764
Q ss_pred -HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCcc--ccccCcccccccceeeEEE
Q 013679 336 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYA--RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 -~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~A--R~~sgLsv~~FlK~~s~~~ 393 (438)
.+..++ .+|.|++..++.. .+..+|= +|+. |..|..+++.|++.-++..
T Consensus 447 ~~~~~~l-~aG~V~vN~~~~~--------~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 503 (521)
T 4e4g_A 447 RDFASRI-NIGMVGVNVPIPV--------PLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503 (521)
T ss_dssp HHHHHHC-CCSEEEESCSSCC--------CCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHhC-CeeeEEECCCCCC--------CCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEE
Confidence 566666 5999999975432 1233554 4556 5667788889988777654
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=96.93 E-value=0.3 Score=51.03 Aligned_cols=320 Identities=16% Similarity=0.101 Sum_probs=175.2
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce---
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS--- 102 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~--- 102 (438)
.+-.+..+.+-+.++++.|+=..-.++..-+. +.+....-+..+++.++.|.+.- .+ |.
T Consensus 82 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~~~~~a~~~-~~-~~g~~ 143 (500)
T 1o04_A 82 SHRGRLLNRLADLIERDRTYLAALETLDNGKP----------------YVISYLVDLDMVLKCLRYYAGWA-DK-YHGKT 143 (500)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHT-TT-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHHHHHHHHH-HH-hhCcc
Confidence 33445566666666666665555455444321 11111222556667777665432 21 21
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-h
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 179 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-I 179 (438)
+...+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+. ||+=|.. .-.... .+......+|+.+ +
T Consensus 144 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gv 217 (500)
T 1o04_A 144 IPIDGDFFSYTRHEPVGVCGQIIPW---NFPLLMQAWKLGPALATGNV--VVMKVAE-QTPLTALYVANLIKEAGFPPGV 217 (500)
T ss_dssp ECCSSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHHTCCTTS
T ss_pred eecCCCceEEEEEecCCcEEEECCC---CchHHHHHHHHHHHHHcCCE--EEEECCc-cChHHHHHHHHHHHHhCCCcCe
Confidence 1223465666788999999999995 477 4555678899999986 3344442 111112 2233455666542 3
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEEe--cCCc----HHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKIF--GPGN----QYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkIv--GPGN----~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
+.+ | |.+.-.+|. .-|+||+|. |--. ++.++| +.+. .|-.. +-|-+= +|-|++||.+.
T Consensus 218 v~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~-----pv~lE-LGGk~p--~iV~~dADl~~ 285 (500)
T 1o04_A 218 VNIVPGFGPTAGAAIA----SHEDVDKVAFTGSTEIGRVIQVAAGSSNLK-----RVTLE-LGGKSP--NIIMSDADMDW 285 (500)
T ss_dssp EEECCBCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCEE--EEECTTSCHHH
T ss_pred EEEEecCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHhhhhhcCc-----eEEEE-cCCcCe--EEECCCCCHHH
Confidence 322 4 555445554 258899997 4322 133444 2111 01111 124443 44456689988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc-
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG- 302 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~- 302 (438)
.|-.++.-+ =.--.+...++... +.. +++.+.+.+.++.+. . .+.++.+.+
T Consensus 286 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 363 (500)
T 1o04_A 286 AVEQAHFALFFNQGQCSCAGSRTFVQE-DIY-DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 363 (500)
T ss_dssp HHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCCCCCCEEEEeh-hHH-HHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhC
Confidence 777765422 11223444444433 343 666666665555441 0 011111110
Q ss_pred -------------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHH
Q 013679 303 -------------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWE 338 (438)
Q Consensus 303 -------------------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l 338 (438)
.| .|+.++|+|||++++|..-- --..|.++|.. .++
T Consensus 364 Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (500)
T 1o04_A 364 GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLS 443 (500)
T ss_dssp TCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 11 24457899999999998522 23567788864 466
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++ .+|.|++..++.. . .-+| .+|..|+.|..+++.|+..-++..
T Consensus 444 ~~l-~aG~V~iN~~~~~-------~--~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 444 QAL-QAGTVWVNCYDVF-------G--AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHC-CSSEEEESCSSCC-------C--TTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HhC-CeeEEEECCCCCC-------C--CCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 666 4899999976431 1 1244 456678878888999998887653
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.31 Score=50.48 Aligned_cols=324 Identities=13% Similarity=0.085 Sum_probs=172.6
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-C-c
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-E-T 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~-~ 101 (438)
...+-.+..+.+.+.++++.|+=..-.++..-+. + .+.+.-+..+++.++.|.+...+- . +
T Consensus 64 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 126 (485)
T 4dng_A 64 TTEDRKAVLQKARGYLHENRDDIIMMIARETGGT----------------I-IKSTIELEQTIAILDEAMTYTGELGGVK 126 (485)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHGGGCSCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3445556667777777777776555555554421 1 122223666777777766543221 1 1
Q ss_pred e-EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-----HHHHHHc
Q 013679 102 S-VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-----LYCAKKA 174 (438)
Q Consensus 102 ~-~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-----L~AA~l~ 174 (438)
. ....+|...-.++.|+.-|++..|- -|| ...+...+||-.||+.=| +-|.. ..|.+ ..+...+
T Consensus 127 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~~~~~~l~~~l~~a 197 (485)
T 4dng_A 127 EVPSDIEGKTNKIYRLPLGVISSISPF---NFPMNLSMRSIAPAIALGNSVV--HKPDI----QTAISGGTIIAKAFEHA 197 (485)
T ss_dssp CCCCSSTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHTHHHHHHHHHT
T ss_pred ccccCCCCceEEEEEecceEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCC----cChHHHHHHHHHHHHHh
Confidence 1 1123567788889999999999995 466 344557789999997544 34431 34432 2355667
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCC
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIY 244 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~ 244 (438)
|+.+ ++. -| |.+.-.+|. .-|+||+|.==|..=| .+|+.+-- |-.. +-|-+= +|-|++
T Consensus 198 GlP~gvv~vv~g~~~~~~~~L~----~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~-----v~lE-lGGk~p--~iV~~d 265 (485)
T 4dng_A 198 GLPAGVLNVMLTDVKEIGDGML----TNPIPRLISFTGSTAVGRHIGEIAGRAFKR-----MALE-LGGNNP--FAVLSD 265 (485)
T ss_dssp TCCTTSEEECCCCHHHHTTHHH----HCSSCSEEEEEECHHHHHHHHHHHHHHTCE-----EEEE-ECCCEE--EEECTT
T ss_pred CcCCCeEEEEeCCChhHHHHHH----hCCCCCEEEEECCcHHHHHHHHHHhhhccc-----hhhh-cCCCCc--eEEcCC
Confidence 6642 222 13 333334443 2478999874444322 22332210 1111 114443 444667
Q ss_pred CCHHHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHH
Q 013679 245 ASPVHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFAS 298 (438)
Q Consensus 245 Anp~~vAaDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~ 298 (438)
||.+..|-.++.-+=... .|...++.. ++.. +++.+.+.+.++.+. . .+.++
T Consensus 266 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~ 343 (485)
T 4dng_A 266 ADVDRAVDAAIFGKFIHQGQICMIINRIIVH-QDVY-DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIE 343 (485)
T ss_dssp SCHHHHHHHHHHHHTTCC----CCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCccccCCEEEEe-HHHH-HHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHH
Confidence 999987777665442222 233334333 3453 777777766665541 0 12223
Q ss_pred HhhcC-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---H
Q 013679 299 KALGH-----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 336 (438)
Q Consensus 299 ~sl~~-----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~ 336 (438)
.+.+. | .++.++|+|||++++|..--=| ..|.++|.. .
T Consensus 344 ~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 423 (485)
T 4dng_A 344 QAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423 (485)
T ss_dssp HHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 22211 2 2455889999999999964333 557788875 4
Q ss_pred HHhhcccccccccCCCCccccccc-ccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDY-ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY-~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..++ .+|.|++..++....... +.| ...+|+.|+.+..+++.|++.-++.
T Consensus 424 ~~~~l-~~G~v~vN~~~~~~~~~~pfGG----~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 424 FALQI-DSGMTHVNDQSVNDSPNIAFGG----NKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHTTS-CSSEEEESCC--------------------------CHHHHHHHEEEEEEE
T ss_pred HHHhc-CcceEEECCCCCCCCCCCCcCC----cCCCCCCccchHHHHHHhhceEEEE
Confidence 56666 589999998653211111 111 1356778888888899998876654
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.24 Score=51.81 Aligned_cols=321 Identities=13% Similarity=0.082 Sum_probs=172.5
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEEe
Q 013679 27 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVEN 105 (438)
Q Consensus 27 ~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~~ 105 (438)
+-.+..+.+.+.++++.|+=..-.++..-+. +.+....-+..+++.++.|.+.-..- .-.+..
T Consensus 84 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~ 147 (501)
T 1bxs_A 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKL----------------FSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM 147 (501)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------HHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence 3445566666666666665554445444321 11111222455666666554422110 001122
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-hhhc
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-ILKA 182 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-Iy~v 182 (438)
.+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.= |+=|.. .-.... .+......+|+.. ++.+
T Consensus 148 ~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~V--VlKps~-~tp~t~~~l~~l~~~aGlP~gv~~v 221 (501)
T 1bxs_A 148 DGNFFTYTRSEPVGVCGQIIPW---NFPLLMFLWKIGPALSCGNTV--VVKPAE-QTPLTALHMGSLIKEAGFPPGVVNI 221 (501)
T ss_dssp SSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEE--EEECCT-TCCHHHHHHHHHHHHHTCCTTSEEE
T ss_pred cCCcceeEEecCCceEEEECCC---cchHHHHHHHHHHHHHcCCee--eccCCC-ccHHHHHHHHHHHHHhCCCcceEEE
Confidence 3466667789999999999995 467 44556789999999963 344432 111111 2223455666542 2222
Q ss_pred --c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 183 --G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 183 --G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
| |.+.-.+|. .-|+||+|.==|..- -++| +.+. .|-.. +-|-+= +|-|++||.+..|-
T Consensus 222 v~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~-----~v~lE-LGGk~p--~iV~~dADl~~Aa~ 289 (501)
T 1bxs_A 222 VPGYGPTAGAAIS----SHMDVDKVAFTGSTEVGKLIKEAAGKSNLK-----RVSLE-LGGKSP--CIVFADADLDNAVE 289 (501)
T ss_dssp CCSCTTTHHHHHH----TCTTCSEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCCE--EEECTTSCHHHHHH
T ss_pred EecCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhccCC-----cEEEe-cCCcCe--EEECCCCCHHHHHH
Confidence 4 555445554 258899997333322 2333 1111 01111 124443 44456689988777
Q ss_pred hhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc----
Q 013679 253 DLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG---- 302 (438)
Q Consensus 253 DLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~---- 302 (438)
.++.-+=. --.+...++.. ++.. ++..+.+.+.++.+. . ...++.+.+
T Consensus 290 ~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 367 (501)
T 1bxs_A 290 FAHQGVFYHQGQCCIAASRLFVE-ESIY-DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAK 367 (501)
T ss_dssp HHHHHHHTTTTCCTTCCCEEEEE-HHHH-HHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCCCCCEEEEc-hhHH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCE
Confidence 76642211 12233333332 2343 777777776665542 0 011222210
Q ss_pred ----------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhc
Q 013679 303 ----------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESII 341 (438)
Q Consensus 303 ----------------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~i 341 (438)
.| .++.++|+|||++++|..-- --..|.++|.. .++.++
T Consensus 368 ~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 447 (501)
T 1bxs_A 368 LECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSAL 447 (501)
T ss_dssp ECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHS
T ss_pred EEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhc
Confidence 01 23447899999999998532 22567788865 466666
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.+|.|++..++.. + .-+|- +|..|+.|..+++.|+..-++..
T Consensus 448 -~aG~V~iN~~~~~-------~--~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 448 -QSGTVWVNCYSVV-------S--AQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp -CCSEEEESCCCCC-------C--TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred -CeeEEEECCCCCC-------C--CCCCCCCcCcCCcCccchHHHHHHhhCeeEEEE
Confidence 4899999976431 1 12454 45667777778889988877653
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.7 Score=47.79 Aligned_cols=320 Identities=19% Similarity=0.151 Sum_probs=176.3
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE-
Q 013679 27 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE- 104 (438)
Q Consensus 27 ~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~- 104 (438)
+-.+..+.+.+.++++.|+=..-.++..-+. ..+.+.-+..+++.++.|....... .....
T Consensus 70 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~ 132 (481)
T 3jz4_A 70 ERATILRNWFNLMMEHQDDLARLMTLEQGKP-----------------LAEAKGEISYAASFIEWFAEEGKRIYGDTIPG 132 (481)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHGGGCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 3344455555666666655444444444321 1122334667777887665432221 11111
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-hhhc
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-ILKA 182 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-Iy~v 182 (438)
..+|...-.++.|+.-|++..|- .+|+ ...+.-.+||-.||+.=|+ -|.... .... .+......+|+.+ ++.+
T Consensus 133 ~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVl--Kps~~t-p~~~~~l~~l~~~aGlP~gvv~v 207 (481)
T 3jz4_A 133 HQADKRLIVIKQPIGVTAAITPW-NFPA-AMITRKAGPALAAGCTMVL--KPASQT-PFSALALAELAIRAGVPAGVFNV 207 (481)
T ss_dssp SSTTEEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEEE--ECCTTS-CHHHHHHHHHHHHHTCCTTTEEE
T ss_pred cCCCceEEEEEcCccEEEEECCC-cchH-HHHHHHHHHHHHcCCEEEE--ECCCCC-cHHHHHHHHHHHHhCcCCCeEEE
Confidence 13466677888999999999995 3333 3445567899999975443 343211 1111 2223456667643 3332
Q ss_pred --c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 183 --G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 183 --G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
| |...-.+|.- -|+||+|.==|..=| ++|+.+. .|-. -+-|-+= +|-|++||.+..|-.
T Consensus 208 v~g~~~~~g~~L~~----~p~v~~I~fTGS~~~g~~i~~~aa~~~~-----~v~l-ElGGk~p--~iV~~dADl~~Aa~~ 275 (481)
T 3jz4_A 208 VTGSAGAVGNELTS----NPLVRKLSFTGSTEIGRQLMEQCAKDIK-----KVSL-ELGGNAP--FIVFDDADLDKAVEG 275 (481)
T ss_dssp CCBCTHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHTTTTC-----EEEE-ECCCCEE--EEECTTSCHHHHHHH
T ss_pred EeCCChHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHHhhcCC-----ceEE-ecCCCCe--EEEcCCCCHHHHHHH
Confidence 3 5555555542 588999976665432 2221110 0111 1124333 444667999887766
Q ss_pred hhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC----
Q 013679 254 LLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH---- 303 (438)
Q Consensus 254 LLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~---- 303 (438)
++.-+= .--.+...++.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 276 i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 353 (481)
T 3jz4_A 276 ALASKFRNAGQTCVCANRLYVQ-DGVY-DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARV 353 (481)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEE-GGGH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhCCCcccCCcEEEEe-HHHH-HHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEE
Confidence 654221 122344444443 3353 777777777777661 0 1122222111
Q ss_pred ----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcc
Q 013679 304 ----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIE 342 (438)
Q Consensus 304 ----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~ 342 (438)
| .|+.++|+|||++++|..--=| ..|.++|.. .+..+++
T Consensus 354 ~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 433 (481)
T 3jz4_A 354 VCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALE 433 (481)
T ss_dssp EECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCC
T ss_pred EeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 1 2345789999999999854333 557787865 4666664
Q ss_pred cccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeEE
Q 013679 343 NAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 343 nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~~ 392 (438)
+|.|++..++. .++-+|-+| ..|..+..+++.|.+.-++.
T Consensus 434 -~G~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~ 478 (481)
T 3jz4_A 434 -YGIVGINTGII---------SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC 478 (481)
T ss_dssp -CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred -eeeEEECCCCC---------CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEE
Confidence 99999997543 134466655 45666777788888766653
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.53 Score=49.43 Aligned_cols=318 Identities=14% Similarity=0.101 Sum_probs=174.9
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-----CC
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-----AE 100 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-----~~ 100 (438)
.+-.+..+.+-+.++++.|+=..-.++...+...+. -+..+++.++.|.+...+ ..
T Consensus 74 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-------------------ev~~~~~~~~~~a~~~~~~~~~~~g 134 (517)
T 3r31_A 74 MARGRILKRAADIMRERNDALSTLETLDTGKPIQET-------------------IVADPTSGADAFEFFGGIAPSALNG 134 (517)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-------------------HHHSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-------------------HHHHHHHHHHHHHHHhhhccccccC
Confidence 344455666666666666665555555444321010 133344444444332111 12
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH 178 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e 178 (438)
......+|. .-.++.|+.-|++..|- -|| ...+.-++||-.||+.=|+ =|.. .-..... +......+|+..
T Consensus 135 ~~~~~~~~~-~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~ll~eaGlP~ 207 (517)
T 3r31_A 135 DYIPLGGDF-AYTKRVPLGVCVGIGAW---NYPQQIACWKAAPALVAGNAMVF--KPSE-NTPLGALKIAEILIEAGLPK 207 (517)
T ss_dssp CEEECSSSE-EEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEE--ECCT-TSCSHHHHHHHHHHHTTCCT
T ss_pred cccccCCCc-ceEEEcCccEEEEECCC---cchHHHHHHHHHHHHHcCCEEEE--EcCc-ccHHHHHHHHHHHHHhCcCc
Confidence 222334566 77889999999999994 456 3445567899999975444 3432 1112222 333556677642
Q ss_pred -hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 -Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. .||...-.+|. .-|.||+|.==|..=| ++|+.+-- |-.. +-|-+= +|-|++||.+.
T Consensus 208 gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~-----v~lE-lGGk~p--~IV~~dADl~~ 275 (517)
T 3r31_A 208 GLFNVIQGDRDTGPLLV----NHPDVAKVSLTGSVPTGRKVAAAAAGHLKH-----VTME-LGGKSP--MIVFDDADIES 275 (517)
T ss_dssp TSEEECCCCTTHHHHHH----TCTTEEEEEEESCHHHHHHHHHHHHHTTCE-----EEEE-CCCCEE--EEECTTSCHHH
T ss_pred ccEEEEECCHHHHHHHH----hCCCcCEEeccCCHHHHHHHHHHhhcCCCc-----EEEE-cCCcCe--EEEecCCCHHH
Confidence 332 25655555665 2588999976664322 22322210 1111 123333 44466799998
Q ss_pred HHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh--
Q 013679 250 IAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL-- 301 (438)
Q Consensus 250 vAaDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl-- 301 (438)
.|..++.-+=... .|...++... +.. +++.+.+.+.++.+.- .+.++.+.
T Consensus 276 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 353 (517)
T 3r31_A 276 AVGGAMLGNFYSSGQVCSNGTRVFVQK-KAK-ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAE 353 (517)
T ss_dssp HHHHHHHHHTSCCHHHHTTCEEEEEEG-GGH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceeccCceEEEeH-HHH-HHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhC
Confidence 8877765433322 2333333322 243 6666666555544320 01111111
Q ss_pred -------------------------------------c--CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---
Q 013679 302 -------------------------------------G--HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE--- 335 (438)
Q Consensus 302 -------------------------------------~--~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~--- 335 (438)
+ .| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 354 Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 433 (517)
T 3r31_A 354 GATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAH 433 (517)
T ss_dssp TCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHH
T ss_pred CCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHH
Confidence 1 12 2455789999999999853222 567788864
Q ss_pred HHHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 336 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 ~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++.++ .+|.|++..++.. +.-+| -+|..|+.|..+++.|+..-++..
T Consensus 434 ~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 486 (517)
T 3r31_A 434 RVVDGL-EAGTLWINTYNLC---------PVEIPFGGSKQSGFGRENSAAALEHYSELKTVYV 486 (517)
T ss_dssp HHHHHS-CCSEEEESSCCCC---------CTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEE
T ss_pred HHHHHC-CcceEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 567777 5999999985421 22344 456778889999999998877653
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.23 Score=51.73 Aligned_cols=322 Identities=17% Similarity=0.140 Sum_probs=180.3
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+...+ +..|+ ....+.|+..+++++++...+.+
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e----a~~ev------~~~~~~~~~~a~~~~~~~~~~~~---- 110 (484)
T 3ros_A 45 EEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE----SKEEV------ELCVSICNYYADHGPEMLKPTKL---- 110 (484)
T ss_dssp SCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH----HHHHH------HHHHHHHHHHHHHHHHHTSCEEE----
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH----HHHHH------HHHHHHHHHHHHHHHHhcCCeec----
Confidence 34445566677777777888777666666655532100 00010 02233344444444444322221
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~ 177 (438)
..+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=|+= |.. ..|. +......+|+.
T Consensus 111 --~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVlK--ps~----~tp~t~~~l~~l~~~aGlP 179 (484)
T 3ros_A 111 --NSDLGNAYYLKQSTGVIMACEPW---NFPLYQVIRVFAPNFIVGNPILLK--HAH----NVPGSAALTAKIIKRAGAP 179 (484)
T ss_dssp --CCTTSEEEEEEECCCEEEEECCS---SSTTHHHHHHHHHHHHHTCCEEEE--CCT----TCHHHHHHHHHHHHHHTCC
T ss_pred --cCCCceeEEEecCCceEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCC----CChHHHHHHHHHHHHhCcC
Confidence 12455677889999999999995 355 34445678999999865543 431 3342 22345566664
Q ss_pred h-hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 178 H-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 178 e-Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
+ ++. .|+...++.|. .-|+||+|.==|..= -++|+.+- .|-.. +-|-+= +|-|++||.+
T Consensus 180 ~gvv~vv~g~~~~~~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~lk-----~v~lE-LGGk~p--~iV~~dADl~ 247 (484)
T 3ros_A 180 EGSLINLYPSYDQLADII----ADPRIQGVALTGSERGGSAVAEAAGKNLK-----KSTME-LGGNDA--FIVLDDADPQ 247 (484)
T ss_dssp TTSEEEECCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCCE--EEECTTCCHH
T ss_pred cCeEEEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhccCC-----ceEee-cCCCCc--ceeCCCCCHH
Confidence 2 222 24344444454 258899997555432 23332221 01111 124443 4446679999
Q ss_pred HHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------------C-HHHHHHhhc
Q 013679 249 HIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------------R-GEFASKALG 302 (438)
Q Consensus 249 ~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------------r-~~ia~~sl~ 302 (438)
..|-.++.-+=.. -.|...++.. ++.. +++.+.+.+.++.+. | .+.++.+.+
T Consensus 248 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 248 VLRNVLNDARTYNDGQVCTSSKRIIVE-KSRY-DEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHTTTTTGGGGCCTTSCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccCCceEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 8887776533222 2233333333 2353 777777777666542 0 112222211
Q ss_pred C--------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HH
Q 013679 303 H--------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KW 337 (438)
Q Consensus 303 ~--------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~ 337 (438)
. | .|+.++|+|||++++|..--=| ..|.++|.. .+
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 1 2 2345789999999999864322 567788864 46
Q ss_pred HhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEE
Q 013679 338 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 338 l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
..++ .+|.|++..++. .+.-+|-+ |..|..|..+++.|+..-++..
T Consensus 406 ~~~l-~aG~V~vN~~~~---------~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 456 (484)
T 3ros_A 406 SAQI-ETGMTVINGRWI---------TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456 (484)
T ss_dssp HHHS-CSSCCEETSCCC---------CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEE
T ss_pred HHhC-ccceEEECCCCC---------CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEE
Confidence 6666 589999997432 12334544 5678888889999998877654
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.61 Score=48.17 Aligned_cols=287 Identities=15% Similarity=0.154 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHHh--cc-CCCceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCC
Q 013679 82 FDVAYNNIYAFHLA--QK-SAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 82 i~~A~~nI~~fh~~--q~-~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
+..+++.++.|... ++ .........++....+++.|+.-||+..|= -|| ...+...+||-.||+.=|+=.+|-
T Consensus 88 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---NfP~~~~~~~~~~ALaaGN~VVlKps~~ 164 (474)
T 4h7n_A 88 IDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPW---NFPLTLSMIDTIPALLAGCAVVVKPSEI 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECS---SSHHHHHHTTHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCC---CcHHHHHhcccCcchhcCCceeeccccc
Confidence 55566666666432 11 222222335677788889999999999884 477 445556789999998655443332
Q ss_pred CCCCCCCHHHHHHHHHcCCc-hhhh--cchHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccc
Q 013679 158 SQDGSICKEVLYCAKKAGVT-HILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISI 228 (438)
Q Consensus 158 ~~~G~i~p~iL~AA~l~Gv~-eIy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgI 228 (438)
.+ ...-.++.++..+|.- .++. -||.....+|. +.||+|.==|..- -.+|+++.- |-.
T Consensus 165 tp--~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~------~~v~~v~FTGS~~~G~~i~~~aa~~~~~-----v~l 231 (474)
T 4h7n_A 165 AP--RFVAPLLMALNTVPELRDVLIFVEGGGETGANLI------NYVDFVCFTGSVATGREVAETAARRFIP-----AYL 231 (474)
T ss_dssp SC--TTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHH------TTCSEEEEESCHHHHHHHHHHHHHHTCC-----EEE
T ss_pred Cc--hHHHHHHhhhhhhcccccceeeccccchhhhhhh------hccceEEeccccchhhhhhhhhhccccc-----ccc
Confidence 11 1112233344445431 2322 36666666664 4588886445432 233444320 111
Q ss_pred cCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-------
Q 013679 229 DMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------- 293 (438)
Q Consensus 229 D~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------- 293 (438)
. +-|=+ -+|-+++||.+..|..++.-+=. --.+...++... +.. ++..+.+.+.+..+. .
T Consensus 232 E-lGGk~--p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~g 306 (474)
T 4h7n_A 232 E-LGGKD--PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAE-SKF-EEFYHQLIAKAHRLQLAYPLVEDGAIG 306 (474)
T ss_dssp E-CCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEG-GGH-HHHHHHHHHHHHHCCBCCSSGGGCSBC
T ss_pred c-CCCcC--ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchH-HHH-HHHHHHHHHHhhccccCCCcccccccC
Confidence 1 12222 24456779999888776542211 122333333332 232 444444443333221 0
Q ss_pred -------H----HHHHHhhc---------------------------------------CC---eEEEeCCHHHHHHHhh
Q 013679 294 -------G----EFASKALG---------------------------------------HS---FMVFARDMLEGISFSN 320 (438)
Q Consensus 294 -------~----~ia~~sl~---------------------------------------~g---~ii~v~~l~ea~~~~N 320 (438)
. +.+..+.+ .| .|+.++|+|||++++|
T Consensus 307 pli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 386 (474)
T 4h7n_A 307 PIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLAN 386 (474)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHH
Confidence 0 11112211 11 3566899999999999
Q ss_pred hhc-cccceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCCcc-ccccCcccccccceeeEE
Q 013679 321 LYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYA-RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 321 ~~A-PEHLel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~A-R~~sgLsv~~FlK~~s~~ 392 (438)
.-- +=-..|.++|... +..+++ +|.|++..++...+ --.||--=.|.+|.. |..|.-+++.|++.-++.
T Consensus 387 ~~~~GL~a~v~t~d~~~a~~~a~~l~-aG~v~iN~~~~~~~--~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~ 460 (474)
T 4h7n_A 387 DTIYGLSAAVFAGSEDEALKVARQLN-AGAISINDAALTAM--MHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460 (474)
T ss_dssp CSSCCSEEEEECSSHHHHHHHHTTSC-CSEEEESSSCGGGT--CCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEE
T ss_pred cCCCCCeEEEEeCCHHHHHHHHHhCC-eeEEEECCCCccCC--cCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEE
Confidence 742 2235677888754 555664 89999997543211 012333334455554 667777899999887764
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.63 Score=48.44 Aligned_cols=280 Identities=19% Similarity=0.139 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHhccCCCce-EEe-cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETS-VEN-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~-~~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
-+..+++.++.|.+.-..-... ... .+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=|+ -|.
T Consensus 110 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps 184 (497)
T 3k2w_A 110 EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAW---NFPLALAGRKIGPALITGNTMVL--KPT 184 (497)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEE--ECC
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEE--ECC
Confidence 4667777787775532221111 111 3566777889999999999995 577 4555778899999975444 343
Q ss_pred CCCCCCCH-HHHHHHHHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HH---HHHhcCCC
Q 013679 158 SQDGSICK-EVLYCAKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AA---KMILQNSE 223 (438)
Q Consensus 158 ~~~G~i~p-~iL~AA~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~A---K~~v~~~~ 223 (438)
. .-.... .+......+|+.. ++. -| |...-.+|. .-|.||+|.==|..=|- +| |+++.
T Consensus 185 ~-~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~l--- 256 (497)
T 3k2w_A 185 Q-ETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLC----ESPITKMITMTGSTVAGKQIYKTSAEYMTPVML--- 256 (497)
T ss_dssp S-SSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHH----HCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEE---
T ss_pred C-CChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEE---
Confidence 2 111111 2223455666542 221 13 444444554 25889999766654321 12 22211
Q ss_pred CcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------
Q 013679 224 AMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------ 293 (438)
Q Consensus 224 ~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------ 293 (438)
. +-|-+= +|-|++||.+..|-.++.-+=. --.|...++... +.. +++.+.+.+.++.+.-
T Consensus 257 -----E-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~vg~p~~~ 326 (497)
T 3k2w_A 257 -----E-LGGKAP--MVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHA-SVY-DEFMAKFLPLVKGLKVGDPMDA 326 (497)
T ss_dssp -----E-CCCCEE--EEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEET-TTH-HHHHHHHHHHHHTCCBSCTTST
T ss_pred -----E-cCCCCc--eEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeH-HHH-HHHHHHHHHHHHhccCCCCCCC
Confidence 1 123333 4456679999877776532211 123444444433 243 6777666666655520
Q ss_pred ----------------HHHHHHh---------------------------------------h--c-CC---eEEEeCCH
Q 013679 294 ----------------GEFASKA---------------------------------------L--G-HS---FMVFARDM 312 (438)
Q Consensus 294 ----------------~~ia~~s---------------------------------------l--~-~g---~ii~v~~l 312 (438)
.+.++.+ + + .| .|+.++|+
T Consensus 327 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 406 (497)
T 3k2w_A 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSM 406 (497)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCH
Confidence 0111111 1 1 13 34568999
Q ss_pred HHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccc
Q 013679 313 LEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLD 383 (438)
Q Consensus 313 ~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~ 383 (438)
|||++++|..--=| ..|.++|.. .++.++ .+|.|++..++.. ++-+|-+ |..|..|..+++
T Consensus 407 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~v~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~ 476 (497)
T 3k2w_A 407 EQAIEFCNDSIYGLSAYVHTQSFANINQAISDL-EVGEVYINRGMGE---------QHQGFHNGWKQSGFGGEDGKFGLE 476 (497)
T ss_dssp HHHHHHHTCSSEESEEEEECSBHHHHHHHHHHC-CSSEEEESCCSCC---------CTTSCBCCEETSEESCBSHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhC-CeeEEEEcCCCCC---------CCCCCcCCcCCCcCCccchHHHHH
Confidence 99999999864433 567787864 566676 4999999976432 1345544 567777778889
Q ss_pred cccceeeEEE
Q 013679 384 SFLKYMTVQS 393 (438)
Q Consensus 384 ~FlK~~s~~~ 393 (438)
.|+..-++..
T Consensus 477 ~ft~~k~v~~ 486 (497)
T 3k2w_A 477 QYLEKKTVYI 486 (497)
T ss_dssp TTEEEEEEEE
T ss_pred HhcceEEEEE
Confidence 9987776544
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.78 Score=48.07 Aligned_cols=334 Identities=15% Similarity=0.171 Sum_probs=171.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce-
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS- 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~- 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-....|.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~~a~~ev~~~~~~l~~~a~~~~~~~~~~ 145 (528)
T 3v4c_A 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPE-----------------ARLNGERGRTTGQLRLFADHIEKGDYLD 145 (528)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 34444555666666677776665544444443210 111122445555555554322111111
Q ss_pred --EE-------ecCceEEEEEEEecceeeEeecCCCCCCchHhh---hhcccceecCCCeEEEecCCCCCCCCCHHH---
Q 013679 103 --VE-------NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTAL---MLSVPAQIAGCKTVVLATPPSQDGSICKEV--- 167 (438)
Q Consensus 103 --~~-------~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvL---M~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--- 167 (438)
.. ..+|...-.++.|+.-|++..|- -||-... .-++||-.||+.=| +-|.. ..|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~a~ALaaGN~VV--lKps~----~tp~t~~~ 216 (528)
T 3v4c_A 146 RRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGAS---NFPLAFSTAGGDTAAALAAGCPVV--VKGHS----AHPGTGEI 216 (528)
T ss_dssp CEEECCBTTCSSSCBCCEEEEEEECSCEEEECCS---SSTTTTSTTSHHHHHHHHHTCCEE--EECCT----TCHHHHHH
T ss_pred cccccccccccCCCCCcceeEeeCCcEEEEECCC---cchHHHhhhhhhhHHHHhcCCEEE--EECCC----CCcHHHHH
Confidence 00 01233345788999999999884 3554432 47899999997544 33432 34432
Q ss_pred HH-----HHHHcCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcH----HH--HHHHHHhcCCCCcccccCCC
Q 013679 168 LY-----CAKKAGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQ----YV--TAAKMILQNSEAMISIDMPA 232 (438)
Q Consensus 168 L~-----AA~l~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~----yV--~~AK~~v~~~~~~VgID~~A 232 (438)
|+ +...+|+.+ ++.+ | |...-.+|.= -|.||+|.==|.. .| ++|+++--. .| +=-+-
T Consensus 217 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~----~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~---pv-~lElG 288 (528)
T 3v4c_A 217 VAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQ----HPHIKAVGFTGSLAGGRALFDLCAARPEPI---PF-FGELG 288 (528)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CE-EEECC
T ss_pred HHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHh----CCCCCEEEEECChHHHHHHHHHHhhccCCC---ce-EEecC
Confidence 22 233467643 3322 3 5554455542 4889999755543 22 223222000 00 00122
Q ss_pred CCceEEEEecCCC---CHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------------
Q 013679 233 GPSEVLVIADIYA---SPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------------ 293 (438)
Q Consensus 233 GPSEvlIiAD~~A---np~~vAaDLLaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------------ 293 (438)
|-+=++| |++| |.+.+|..++.- +=.--.|...++....... +++.+.+.+.++.+.-
T Consensus 289 Gk~p~iV--~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~~~~~gp~~~~~~ 365 (528)
T 3v4c_A 289 SVNPMFL--LPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA-DRFTTAAVEALAKVAPQTMLTDGIAKAY 365 (528)
T ss_dssp CCCCEEE--CHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH-HHHHHHHHHHHHTCCCEECSCHHHHHHH
T ss_pred CCCeEEE--CCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH-HHHHHHHHHHHHhcccCCCCCHHHHHHH
Confidence 4343444 4456 444444444321 1112234444444332232 5555555555544310
Q ss_pred HHHHH------------------------------------Hhhc---CC---eEEEeCCHHHHHHHhhhhcccc-ceec
Q 013679 294 GEFAS------------------------------------KALG---HS---FMVFARDMLEGISFSNLYAPEH-LIVN 330 (438)
Q Consensus 294 ~~ia~------------------------------------~sl~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~ 330 (438)
.+.+. ..+. .| .|+.++|+|||++++|..--=| ..|.
T Consensus 366 ~~~v~~~~~~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~ 445 (528)
T 3v4c_A 366 RDGQARFATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIH 445 (528)
T ss_dssp HHHHHHHHTCTTCEEEECCCCCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCCCcCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEE
Confidence 00000 1121 13 3455789999999999853222 5566
Q ss_pred cc--Ch---HHHHhhcc-cccccccCCCCccc-cccc--ccCCCCCCCCCCccccc--cCcccccccceeeEEEeCHH
Q 013679 331 VK--DA---EKWESIIE-NAGSVFLGEWTPES-VGDY--ASGTNHVLPTYGYARMY--GGVSLDSFLKYMTVQSLTEE 397 (438)
Q Consensus 331 ~~--~p---~~~l~~i~-nAGaiFlG~~sp~a-~GDY--~aGpNHvLPT~G~AR~~--sgLsv~~FlK~~s~~~~s~~ 397 (438)
++ |. +.+..+++ .+|.|++..++... .++. +.|| .+-+|..|+. |..+++.|++..++|.+...
T Consensus 446 t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~---~~~Sg~gr~~~~G~~gl~~~~~~k~~q~~p~~ 520 (528)
T 3v4c_A 446 MDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGP---YPASTNFGATSVGTMSIRRFLRPVAYQNMPED 520 (528)
T ss_dssp CCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCT---TTTBSCTTCCSSSGGGGGGGEEEEEEESCCGG
T ss_pred cCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCC---CCCCCCCCCCCCcHHHHHHhchhHHhhcCCcc
Confidence 77 44 45777777 79999999865522 1111 1111 2344567875 78899999999999987654
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.45 E-value=1.1 Score=46.57 Aligned_cols=323 Identities=13% Similarity=0.127 Sum_probs=172.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~--q~~~~~ 101 (438)
...+-.+..+.+.+.++++.|+=..-.++...+.. .+.+.-+..+++.++.|... .+...+
T Consensus 63 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~~a~~ev~~~~~~~~~~a~~~~~~~g~~ 125 (486)
T 1t90_A 63 AVPRRARILFNFQQLLSQHKEELAHLITIENGKNT-----------------KEALGEVGRGIENVEFAAGAPSLMMGDS 125 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHTTHHHHHCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 33444555666666666666655555555443210 01112245556666655321 111111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 178 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e- 178 (438)
.....+|...-.++.|+.-|++..|- -|| ...+...+||-.||+.=|+= |.. .-.... .+......+|...
T Consensus 126 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~~aGlP~g 199 (486)
T 1t90_A 126 LASIATDVEAANYRYPIGVVGGIAPF---NFPMMVPCWMFPMAIALGNTFILK--PSE-RTPLLTEKLVELFEKAGLPKG 199 (486)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCS---SCTTHHHHHHHHHHHHTTCEEEEE--CCS-SSCHHHHHHHHHHHHTTCCTT
T ss_pred cccCCCCceeEEEecccCEEEEECCC---chhHHHHHHHHHHHHHcCCEEEEE--CCC-CChHHHHHHHHHHHHhCCCCC
Confidence 11123566667788999999999995 355 33456778999999865443 432 111112 2233455666642
Q ss_pred hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 179 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 179 Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
++. -||.+.-.+|.= -|.||+|.==|..=| ++|+.+. .|-.. +-|-+= +|-|++||.+..
T Consensus 200 vv~vv~g~~~~~~~L~~----~~~v~~I~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~p--~iV~~dADl~~A 267 (486)
T 1t90_A 200 VFNVVYGAHDVVNGILE----HPEIKAISFVGSKPVGEYVYKKGSENLK-----RVQSL-TGAKNH--TIVLNDANLEDT 267 (486)
T ss_dssp SEEECCCSHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCEE--EEECTTSCHHHH
T ss_pred EEEEEECCHHHHHHHHh----CCCCCEEEEeCCHHHHHHHHHHHhccCC-----cEEec-cCCCCc--EEECCCCCHHHH
Confidence 222 255554445542 488999984444222 2222211 01111 134432 344566898887
Q ss_pred HHhhhhcc----CcCCCCceE-EEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh---
Q 013679 251 AADLLSQA----EHGPDSQVV-LVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 300 (438)
Q Consensus 251 AaDLLaQA----EHd~~a~~v-Lvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s--- 300 (438)
|-.++.-+ =.--.+... ++.... . ++..+.+.+.++.+.- .+.++.+
T Consensus 268 a~~i~~~~~~n~GQ~C~a~~rvv~v~~~--~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (486)
T 1t90_A 268 VTNIVGAAFGSAGERCMACAVVTVEEGI--A-DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEE 344 (486)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEHHH--H-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcccCCeeEEecCC--H-HHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence 76665422 112334444 444332 3 6666666666555430 0111111
Q ss_pred ---------------------------------hc---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HH
Q 013679 301 ---------------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 337 (438)
Q Consensus 301 ---------------------------------l~---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~~ 337 (438)
+. .| .++.++|+|||++++|..- +--..|.++|.. .+
T Consensus 345 Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~ 424 (486)
T 1t90_A 345 GARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYF 424 (486)
T ss_dssp TCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHH
T ss_pred CCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 10 12 3455789999999999842 223667788874 46
Q ss_pred HhhcccccccccCCCCcccccccccCCCCCCCCCC-----cc--ccccCcccccccceeeEEE
Q 013679 338 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YA--RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 338 l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~A--R~~sgLsv~~FlK~~s~~~ 393 (438)
..++ .+|.|++..++. .++.-+|-+| +. |+.|.-+++.|+..-++..
T Consensus 425 ~~~l-~aG~v~vN~~~~--------~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 425 RENI-DAGMLGINLGVP--------APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHC-CCSEEEESCSCC--------CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHhC-CcCeEEECCCCC--------CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 6666 699999996432 1223466555 44 6666677888988777643
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.37 E-value=1.3 Score=46.65 Aligned_cols=322 Identities=16% Similarity=0.163 Sum_probs=178.2
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSV 103 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~ 103 (438)
..+-.+..+.+.+.++++.|+=..-.++..-+. +. +.+.-+..+++.++.|.+.-..- ....
T Consensus 84 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~l~~~a~~~~~~~~~~~ 146 (528)
T 3u4j_A 84 GAERSRLMFKVADLILARQEELALIESLEVGKP----------------IA-QARGEIGFCADLWSYAAGQARALEGQTH 146 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 344455566667777777766555555544421 11 11233566666777665432211 1111
Q ss_pred Eec-CceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hh
Q 013679 104 ENM-KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HI 179 (438)
Q Consensus 104 ~~~-~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eI 179 (438)
... +|...-.++.|+.-|++..|-- ||- ..+.-.+||-.||+.=|+ -|.. .-..... +......+|+. .+
T Consensus 147 ~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~gv 220 (528)
T 3u4j_A 147 NNIGDDRLGLVLREPVGVVGIITPWN---FPFIIASERVPWAIGSGCTVVL--KPSE-FTSGTSIRLAELAREAGIPDGV 220 (528)
T ss_dssp CCSCTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEE--ECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred ccCCCCceeEEEeccceEEEEECCCc---cHHHHHHHHHHHHHHcCCeEEE--EcCC-ccHHHHHHHHHHHHHhCCCCCe
Confidence 112 5677778899999999999953 563 445567899999975444 3432 1111112 22345566654 23
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
+.+ | |...-.+|.- -|.||+|.==|..=| ++|+.+- .|-..+ -|-+= +|-|++||.+..
T Consensus 221 v~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~~G~~i~~~aa~~lk-----~v~lEL-GGk~p--~iV~~dADl~~A 288 (528)
T 3u4j_A 221 FNVVTGYGDPAGQVLAE----DPNVDMVAFTGSVRVGTKLGEIAARTVK-----RVGLEL-GGKGP--QIVFADADLDAA 288 (528)
T ss_dssp EEECCCSSTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCEE--EEECTTSCHHHH
T ss_pred EEEEeCCcHHHHHHHHh----CCCcCEEEEeCCHHHHHHHHHHHHhcCC-----ceEEec-CCCCe--eEECCCCCHHHH
Confidence 322 3 5554455542 588999975554322 2222111 122222 24443 444667899988
Q ss_pred HHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC-
Q 013679 251 AADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH- 303 (438)
Q Consensus 251 AaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~- 303 (438)
|..++.-+=. --.+...|+.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 289 a~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 366 (528)
T 3u4j_A 289 ADGIAYGVYHNAGQCCISGSRLLVQ-EGIR-DALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSG 366 (528)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEE-GGGH-HHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCCCcCCCEEEEe-chHH-HHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCC
Confidence 7776642221 22333444443 3343 666666666555441 0 0122222111
Q ss_pred --------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHH
Q 013679 304 --------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 338 (438)
Q Consensus 304 --------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l 338 (438)
| .|+.++|+|||++++|..--=| ..|.++|.. .++
T Consensus 367 a~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 446 (528)
T 3u4j_A 367 AELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTI 446 (528)
T ss_dssp CEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 2 2455789999999999863222 556777764 567
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++ .+|.|++..++.. +.-+|-+ |..|+.|..+++.|+..-++..
T Consensus 447 ~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 447 RRI-RAGRCWINSVIDG---------TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HhC-CeeEEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 777 5999999986421 2345655 4678888888999988777553
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=1.3 Score=46.33 Aligned_cols=324 Identities=17% Similarity=0.123 Sum_probs=180.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+..+.+.+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-..- ...
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~g~~ 131 (505)
T 3prl_A 69 PIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-----------------KSAIGEVSRTADIIRHTADEALRLNGET 131 (505)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCH-----------------HHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 34445566677777777777766555565555321 111223455555666554322110 111
Q ss_pred EEec--C----ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHH
Q 013679 103 VENM--K----GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCA 171 (438)
Q Consensus 103 ~~~~--~----Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA 171 (438)
.... + |...-.++.|+.-|++..|- -||- ..+.-.+||-.||+.=|+= |.. ..|. +..+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVlK--pse----~tp~ta~~l~~ll 202 (505)
T 3prl_A 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPF---NYPVNLAAAKIAPALVTGNTVVFK--PAT----QGSLSGIKMVEAL 202 (505)
T ss_dssp EEGGGSTTTCSSEEEEEEEEECSEEEEEECS---SSTTHHHHHHHHHHHHTTCEEEEE--ECS----TTHHHHHHHHHHH
T ss_pred ccccccccccCCceeEEEEcCCcEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCC----CChHHHHHHHHHH
Confidence 1111 2 44556778999999999994 3443 3345678999999764443 431 3443 22345
Q ss_pred HHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCceEEEEecCCCC
Q 013679 172 KKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 172 ~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~-~~VgID~~AGPSEvlIiAD~~An 246 (438)
..+|+.. ++. .| |...-.+|. .-|+||+|.==|..=|- |++..... -.|-.. +-|-+= +|-|++||
T Consensus 203 ~eaGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G--~~i~~~aal~~v~lE-LGGk~p--~iV~~dAD 273 (505)
T 3prl_A 203 ADAGAPEGIIQVVTGRGSVIGDHLV----EHPGIDMITFTGGTTTG--ERISEKAKMIPVVLE-LGGKDP--AIVLDDAD 273 (505)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHH----TCTTCCEEEEESCHHHH--HHHHHHCCSSCEEEE-CCCCEE--EEECTTCC
T ss_pred HHhCcCcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEeCCHHHH--HHHHHHccCCcEEEE-CCCCCC--CccCCCCC
Confidence 5667642 332 24 565555665 25889999655554332 22111000 001111 113333 44466799
Q ss_pred HHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------------------C-HHHHHHhh
Q 013679 247 PVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------------R-GEFASKAL 301 (438)
Q Consensus 247 p~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------------------r-~~ia~~sl 301 (438)
.+..|..++.-+ =..-.+...++.. ++.. +++.+.+.+.++.+. | .+.++.+.
T Consensus 274 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~ 351 (505)
T 3prl_A 274 LKLTASQIVSGAFSYSGQRCTAIKRVFVQ-DSVA-DQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDAL 351 (505)
T ss_dssp HHHHHHHHHHHHHGGGGCCSSSEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCccccCceEEEe-HHHH-HHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHH
Confidence 988776665422 1223344444443 4453 777777776666542 0 12233332
Q ss_pred cC-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHh
Q 013679 302 GH-----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWES 339 (438)
Q Consensus 302 ~~-----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~ 339 (438)
+. | .|+.++|+|||++++|..--=| ..|.++|.. .++.
T Consensus 352 ~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 431 (505)
T 3prl_A 352 ENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGK 431 (505)
T ss_dssp HTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHH
T ss_pred HCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHH
Confidence 21 2 2455789999999999864333 567788864 5667
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
++ .+|.|++..++. +.++-+|- +|..|+.|..+++.|+..-++..
T Consensus 432 ~l-~aG~V~iN~~~~--------~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~ 481 (505)
T 3prl_A 432 HL-EVGTVHINAKTE--------RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481 (505)
T ss_dssp TS-CSSEEEESSCCC--------SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HC-CeeEEEEcCCCC--------CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEE
Confidence 77 599999997653 12344564 55678888888999998777643
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=96.32 E-value=1.3 Score=46.06 Aligned_cols=321 Identities=17% Similarity=0.121 Sum_probs=178.8
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~-~~~~ 104 (438)
.+-.+..+++-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|...-.+.. ....
T Consensus 72 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~ 134 (484)
T 3ifg_A 72 KERAAILRRWFDLVIANSDDLALILTTEQGKP-----------------LAEAKGEIAYAASFIEWFAEEGKRVAGDTLP 134 (484)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 34445556666666666665444444444321 11223346777888887765322211 1111
Q ss_pred -ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhh
Q 013679 105 -NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILK 181 (438)
Q Consensus 105 -~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~ 181 (438)
..+|...-.++.|+.-|++..|- .+|+ ...+.-..||-.||+.=|+=.+|-. ..... +....+.+|+. .++.
T Consensus 135 ~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~a~ALaaGN~VVlKps~~t---p~t~~~l~~l~~~aGlP~gv~~ 209 (484)
T 3ifg_A 135 TPDANKRIVVVKEPIGVCAAITPW-NFPA-AMIARKVGPALAAGCPIVVKPAEST---PFSALAMAFLAERAGVPKGVLS 209 (484)
T ss_dssp CSSTTEEEEEEEEECSSEEEECCS-SSTT-HHHHHHHHHHHHHTCCEEEECCTTS---CHHHHHHHHHHHHHTCCTTSEE
T ss_pred ccCCCceeEEEecCCcEEEEECCC-cChH-HHHHHHHHHHHHcCCEEEEECCCCC---cHHHHHHHHHHHHhCCCcccEE
Confidence 12566777889999999999995 2333 3344567899999987655433211 11122 22345566653 2322
Q ss_pred --cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 182 --AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 182 --vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
.| |...-.+|.- -|+||+|.==|..=|- +|+++- .|-.. +-|-+=+ |-|++||.+..|-
T Consensus 210 vv~g~~~~~g~~L~~----~p~v~~v~FTGS~~~G~~i~~~aa~~~k-----~v~lE-lGGk~p~--iV~~dADl~~Aa~ 277 (484)
T 3ifg_A 210 VVIGDPKAIGTEITS----NPIVRKLSFTGSTAVGRLLMAQSAPTVK-----KLTLE-LGGNAPF--IVFDDADLDAAVE 277 (484)
T ss_dssp ECCBCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTGGGTC-----EEEEE-CCCCCEE--EECTTSCHHHHHH
T ss_pred EEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHhhccCC-----ceEEe-cCCCCeE--EECCCCCHHHHHH
Confidence 24 5555556653 5889999766654331 121110 01111 1244433 3455689988777
Q ss_pred hhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC---
Q 013679 253 DLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH--- 303 (438)
Q Consensus 253 DLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~--- 303 (438)
.++.-+= .--.+...++.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 278 ~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 355 (484)
T 3ifg_A 278 GAIASKYRNNGQTCVCTNRFFVH-ERVY-DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGAS 355 (484)
T ss_dssp HHHHHHHGGGGCSTTCCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCcccCCCeEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 6654221 122333333333 3353 777777777776653 0 1222333211
Q ss_pred -----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhc
Q 013679 304 -----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 341 (438)
Q Consensus 304 -----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i 341 (438)
| .|+-++|.|||++++|..--=| ..|.++|.. .+..++
T Consensus 356 v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l 435 (484)
T 3ifg_A 356 LMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEAL 435 (484)
T ss_dssp EEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHC
T ss_pred EEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 1 2345789999999999853222 556777764 567777
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+ +|.|++..+.. .++-+|- +|..|..|..+++.|+..-++.
T Consensus 436 ~-aG~v~iN~~~~---------~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~ 481 (484)
T 3ifg_A 436 E-YGMVGINTGLI---------SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481 (484)
T ss_dssp C-CSEEEESCSCC---------CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred C-cceEEEcCCCC---------CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEE
Confidence 6 89999996421 1234554 4567888888999998776653
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.45 Score=48.56 Aligned_cols=329 Identities=11% Similarity=0.113 Sum_probs=176.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHH-------HHHHHHHHHHHHHHHHh
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAV-------KEAFDVAYNNIYAFHLA 95 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~-------~~ai~~A~~nI~~fh~~ 95 (438)
....+-.+..+.+-+.++++-|+=..-.++.+.+... ..+.+.. ..-+..++++++.|...
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~------------~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~ 100 (427)
T 1o20_A 33 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARE------------RGVKESLVDRLALNDKRIDEMIKACETVIGL 100 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TTCCHHHHHHHCCCHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc------------ccccHHHHHHHhcCHHHHHHHHHHHHHHHhc
Confidence 3444555667777777777777654444444432100 0011111 12477788888888753
Q ss_pred ccCCCceEE--e-cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---HH
Q 013679 96 QKSAETSVE--N-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LY 169 (438)
Q Consensus 96 q~~~~~~~~--~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L~ 169 (438)
..+..-... . .+|...-.++.|+.-|++..| +| |...+...+||-.||+.=|+= |.. ..|.+ |+
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p---~p-~~~~~~~~~~ALaaGNtVVlK--ps~----~tp~t~~~l~ 170 (427)
T 1o20_A 101 KDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE---SR-PNVTVETTILALKSGNTILLR--GGS----DALNSNKAIV 170 (427)
T ss_dssp CCCTTCEEEEEECTTSCEEEEEEEECCCEEEECC---SC-THHHHHHHHHHHHTTCCEEEE--CCG----GGHHHHHHHH
T ss_pred ccccCccccccccCCCceeEEEeecceeEEEEec---CC-hHHHHHHHHHHHHcCCEEEEE--CCH----hHHHHHHHHH
Confidence 322211111 1 236556678899999999998 45 677788889999999975544 431 33422 22
Q ss_pred -HHH----HcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEE
Q 013679 170 -CAK----KAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240 (438)
Q Consensus 170 -AA~----l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIi 240 (438)
... .+|+. .++.+ | |...+.++- ..-|+||+|.==|..-| .|++.....-.|-. -+-|-|= +|
T Consensus 171 ~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L---~~~~~v~~I~fTGS~~~--G~~i~~~a~~~v~l-ELGGk~p--~i 242 (427)
T 1o20_A 171 SAIREALKETEIPESSVEFIENTDRSLVLEMI---RLREYLSLVIPRGGYGL--ISFVRDNATVPVLE-TGVGNCH--IF 242 (427)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHH--HHHHHHHCSSCBCC-CCCCCEE--EE
T ss_pred HHHHHHHHHcCCCcccEEEecCCChHHHHHHH---hCCCCccEEEeCCChHH--HHHHHHhcCCCEEE-ecCCCce--EE
Confidence 111 34664 34432 4 333333321 23578999985555322 22222100000211 1335553 44
Q ss_pred ecCCCCHHHHHHhhhhccCc---CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------H--HH----H---HHhhc
Q 013679 241 ADIYASPVHIAADLLSQAEH---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------G--EF----A---SKALG 302 (438)
Q Consensus 241 AD~~Anp~~vAaDLLaQAEH---d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------~--~i----a---~~sl~ 302 (438)
-|++||.+..+-.++.-+=. .-.|...++.. ++.. ++..+.+.+.++.+.- + .+ . ...+.
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~~~~gg~~~~~~~Ptl~~~~~~i~~ 320 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPGTCNAAEKLLVH-EKIA-KEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWP 320 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEE-HHHH-HHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTT
T ss_pred EeCCCCHHHHHHHHHHHhccCCCCCCCccEEEEe-hhhH-HHHHHHHHHHHHHcCCeeecChhhhhhCCcccCCCcchhh
Confidence 45668988766555432211 22333333332 2343 6666666655554431 0 00 0 01121
Q ss_pred ---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCC
Q 013679 303 ---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG 372 (438)
Q Consensus 303 ---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G 372 (438)
.| .++-++|+|||++++|..- +--..|.++|... +..++ .+|.|++..++.. ++-+|-+|
T Consensus 321 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~V~iN~~~~~---------~~~~pfGg 390 (427)
T 1o20_A 321 TEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEI-DAAAVYVNASTRF---------TDGGQFGF 390 (427)
T ss_dssp CCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG---------CSTTTTTC
T ss_pred cccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhC-CccEEEECCCCcc---------CCCCCCCC
Confidence 24 3566899999999999853 2235677888754 55555 6899999975431 23355553
Q ss_pred -----cc----ccccCcccccccceeeEEE
Q 013679 373 -----YA----RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 373 -----~A----R~~sgLsv~~FlK~~s~~~ 393 (438)
.. |..+..+++.|+..-++..
T Consensus 391 ~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~ 420 (427)
T 1o20_A 391 GAEIGISTQRFHARGPVGLRELTTYKFVVL 420 (427)
T ss_dssp SCCSCEECSSSSCCEECCTGGGEEEEEEEE
T ss_pred cccccccCCcccCCChHHHHHHhceEEEEE
Confidence 32 2346677888888777654
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=1.6 Score=45.47 Aligned_cols=320 Identities=16% Similarity=0.151 Sum_probs=174.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--Cc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--ET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~--~~ 101 (438)
...+-.+..+++-+.++++.|+=..-.++..-+. +.+..+.-+..+++.++.|.+.-..- ..
T Consensus 82 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~ 145 (498)
T 4f3x_A 82 TPAERSNALLKIADAIEKEADEFAALEALNCGKP----------------INAVKNDELPAIIDCWRFFAGAVRNLHAPA 145 (498)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3344455566666666667665544444444321 11111233566677777665532221 11
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHH---c--
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKK---A-- 174 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l---~-- 174 (438)
.....+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=| +-|.. ..|.+ +.-+++ +
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGNtVV--lKPs~----~tp~t~~~l~~l~~ealP 216 (498)
T 4f3x_A 146 AGEYLPGHTSMIRRDPIGIVGSIAPW---NYPLMMMAWKLAPAIGGGNTVV--FKPSE----QTPLTALKLARLIADILP 216 (498)
T ss_dssp BEEEETTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT----TCCHHHHHHHHHHHTTSC
T ss_pred ccCCcccccceEEEcCcceEEEECCC---chHHHHHHHHHHHHHHcCCeEE--EECCc----ccHHHHHHHHHHHHHhCC
Confidence 11123566777889999999999994 355 344556789999997544 34432 23322 122222 1
Q ss_pred -CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCH
Q 013679 175 -GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 247 (438)
Q Consensus 175 -Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp 247 (438)
|+=.+..-.|...-.+|. +-|+||+|.==|..=| ++|+.+- .|-.. +-|-+= +|-|++||.
T Consensus 217 ~gv~nvv~g~~~~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~k-----~v~lE-lGGk~p--~IV~~dADl 284 (498)
T 4f3x_A 217 EGVVNVITGRGETVGNALI----NHPKVGMVSITGDIATGKKVLAAAAKTVK-----RTHLE-LGGKAP--VIVYGDADL 284 (498)
T ss_dssp TTSEEECCCCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCEE--EEECTTSCH
T ss_pred cCeEEEEeCCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHHhhCC-----ceeec-CCCCCc--EEECCCCCH
Confidence 333333323554555555 2588999976664322 2232110 01111 123333 344667899
Q ss_pred HHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh
Q 013679 248 VHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL 301 (438)
Q Consensus 248 ~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl 301 (438)
+..|-.++.-+=.. -.+...++... +.. +++.+.+.+.++.+.- .+.++.+.
T Consensus 285 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (498)
T 4f3x_A 285 EAVVNGIRTFGYYNAGQDCTAACRIYAEA-GIY-EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362 (498)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCEEEEEEET-TTH-HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCccCCceEEecH-HHH-HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHH
Confidence 88777766433222 23334444433 243 7777777766665420 11222222
Q ss_pred cC---------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---
Q 013679 302 GH---------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE--- 335 (438)
Q Consensus 302 ~~---------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~--- 335 (438)
+. | .|+-++|.|||++++|..--=| ..|.++|..
T Consensus 363 ~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 442 (498)
T 4f3x_A 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAM 442 (498)
T ss_dssp HSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHH
T ss_pred HCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHH
Confidence 11 1 2344689999999999853332 456777764
Q ss_pred HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 336 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 336 ~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+..++ .+|.|++..++... .-+|-+ |..|..|..+++.|+..-++.
T Consensus 443 ~~a~~l-~aG~V~vN~~~~~~---------~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 443 RAASRL-QYGCTWINTHFMLT---------NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHHHC-CSSEEEESCCSCCC---------TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHHHhC-CcceEEEcCCCCCC---------CCCCcCCcCcCCcCccchHHHHHHhhceEEEE
Confidence 566777 59999999765422 334544 456777777888888776653
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=1.5 Score=45.66 Aligned_cols=327 Identities=21% Similarity=0.206 Sum_probs=179.5
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
..+-.+..+.+-+.++++.|+=..-.++..-+...+ ...|+ ....+.++..++..++++..+.... . .
T Consensus 71 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e----a~~ev------~~~~~~~~~~a~~~~~~~~~~~~~~-~-~ 138 (503)
T 3iwj_A 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE----AAWDI------DDVAGCFEYYADLAEKLDARQKAPV-S-L 138 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH----HHHHH------HHHHHHHHHHHHHHHHHHHHTTEEE-C-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH----HHHHH------HHHHHHHHHHHHHHHHhcCCccccc-c-c
Confidence 344455667777777778776665566655432101 00111 1344556666666666665442110 0 0
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCch-hhh
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVTH-ILK 181 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~e-Iy~ 181 (438)
..++...-.++.|+.-|++..|- -||-. .+.-.+||-.||+.=|+= |.. .-......| .....+|..+ ++.
T Consensus 139 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~~aGlP~gvv~ 212 (503)
T 3iwj_A 139 PMDTFKSHVLREPIGVVGLITPW---NYPMLMATWKVAPALAAGCAAILK--PSE-LASLTCLELGEICKEVGLPPGVLN 212 (503)
T ss_dssp SCTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEEE--CCT-TSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred cCCCccceEEEcCCceEEEECCC---chHHHHHHHHHHHHHhcCCeEEEE--CCC-cchHHHHHHHHHHHHhCcCcCeEE
Confidence 11355666788999999999995 35533 345678999999765443 432 111112222 3445566542 222
Q ss_pred --cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 182 --AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 182 --vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
.| |...-.+|. .-|+||+|.=-|..=| ++|+.+- . |-.. +-|-+= +|-|++||.+..|.
T Consensus 213 vv~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-~----v~lE-lGGk~p--~iV~~dADl~~Aa~ 280 (503)
T 3iwj_A 213 ILTGLGPEAGAPLA----THPDVDKVAFTGSSATGSKIMTAAAQLVK-P----VSLE-LGGKSP--LVVFEDVDLDKAAE 280 (503)
T ss_dssp ECCSCHHHHTHHHH----TCTTCCEEEEESCHHHHHHHHHHHGGGTC-C----EEEE-CCCCEE--EEECSSSCHHHHHH
T ss_pred EEeCCcHHHHHHHh----hCCCccEEEEECcHHHHHHHHHHHhcCCC-C----EEEE-CCCCCc--eEEcCCCCHHHHHH
Confidence 24 555555565 2588999975555322 2222111 0 1111 224333 44466789988776
Q ss_pred hhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhc----
Q 013679 253 DLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALG---- 302 (438)
Q Consensus 253 DLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~---- 302 (438)
.++.-+=. --.+...++... +.. +++.+.+.+.++.+. . .+.++.+.+
T Consensus 281 ~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 358 (503)
T 3iwj_A 281 WAIFGCFWTNGQICSATSRLILHE-SIA-TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGAT 358 (503)
T ss_dssp HHHHHHTGGGGCCTTCEEEEEEET-TTH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCcccCCeeEEcH-HHH-HHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCE
Confidence 66542221 223444444433 243 666666666665542 0 012222211
Q ss_pred ------------------------------------CC---eEEEeCCHHHHHHHhhhhccc-cceecccChH---HHHh
Q 013679 303 ------------------------------------HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KWES 339 (438)
Q Consensus 303 ------------------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~ 339 (438)
.| .|+-++|+|||++++|..--= -..|.++|.. .+..
T Consensus 359 v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 438 (503)
T 3iwj_A 359 ILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTK 438 (503)
T ss_dssp EEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 12 234578999999999985322 2567788865 4666
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeEEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~~~ 393 (438)
++ .+|.|++..+.. .++-+|-+| ..|+.|..+++.|+..-++..
T Consensus 439 ~l-~aG~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 439 AF-KAGIVWVNCSQP---------CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HC-CSSEEEESSSCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred hC-CcceEEEcCCCC---------CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEE
Confidence 76 499999997532 134467554 567777778889988777654
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=2 Score=45.13 Aligned_cols=322 Identities=16% Similarity=0.169 Sum_probs=178.1
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~-~~ 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|.....+-. ..
T Consensus 92 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 154 (520)
T 3ed6_A 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKT-----------------LEESYADMDDIHNVFMYFAGLADKDGGEM 154 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 3344455566777777777766555555544421 11222236777777877765432211 11
Q ss_pred EEec-CceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-
Q 013679 103 VENM-KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 178 (438)
Q Consensus 103 ~~~~-~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e- 178 (438)
.... +|...-.++.|+.-|++..|- -||-.+ +.-.+||-.||+.=| +-|.. .-..... +......+|+..
T Consensus 155 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~apALaaGNtVV--lKPs~-~tp~t~~~l~~l~~eaGlP~g 228 (520)
T 3ed6_A 155 IDSPIPDTESKIVKEPVGVVTQITPW---NYPLLQASWKIAPALATGCSLV--MKPSE-ITPLTTIRVFELMEEVGFPKG 228 (520)
T ss_dssp ECCSSTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHHTCEEE--EECCT-TCCHHHHHHHHHHHHHCCCTT
T ss_pred cccCCCCCcccccccCccEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EEcCC-cchHHHHHHHHHHHHhCCCCC
Confidence 1111 466777889999999999995 355433 356789999997544 33432 1111112 223445666542
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~------yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. .| |...-.+|. +-|+||+|.==|.. +.++|+++- .|-..+ -|-+=++| +++||.+.
T Consensus 229 vvnvv~g~~~~~g~~L~----~~p~vd~V~FTGS~~vG~~i~~~aa~~l~-----~v~lEL-GGk~p~IV--~~dADl~~ 296 (520)
T 3ed6_A 229 TINLILGAGSEVGDVMS----GHKEVDLVSFTGGIETGKHIMKNAANNVT-----NIALEL-GGKNPNII--FDDADFEL 296 (520)
T ss_dssp SEEECCSCCTTHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCCEEEE--CTTSCHHH
T ss_pred eEEEEeCCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhcCC-----CEEEEc-CCCCeeEE--CCCCCHHH
Confidence 222 13 444444444 24889999765653 223332221 022211 24444433 33589988
Q ss_pred HHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC
Q 013679 250 IAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 303 (438)
Q Consensus 250 vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~ 303 (438)
.|-.++.-+=.. -.+...++.. ++.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 297 Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 374 (520)
T 3ed6_A 297 AVDQALNGGYFHAGQVCSAGSRILVQ-NSIK-DKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE 374 (520)
T ss_dssp HHHHHHHHHHGGGGTSTTCCCEEEEE-HHHH-HHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcccCceEEEc-HHHH-HHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC
Confidence 777665432221 2233333333 3453 7777777777666520 1222222211
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhccc-cceecccChH--
Q 013679 304 ------------------------------------------S---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE-- 335 (438)
Q Consensus 304 ------------------------------------------g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~-- 335 (438)
| .|+-++|+|||++++|..--= -..|.++|..
T Consensus 375 Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 454 (520)
T 3ed6_A 375 GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454 (520)
T ss_dssp TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 2 235579999999999985422 2567788864
Q ss_pred -HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 336 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 336 -~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+..+++ +|.|++..+... +.-+|- +|..|..|..+++.|+..-++.
T Consensus 455 ~~~a~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 455 QRVANKLK-LGTVWINDFHPY---------FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHSC-CSEEEESCSCCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHCC-cceEEECCCCCC---------CCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 5667775 999999976432 122444 4556777778888998877654
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=1.9 Score=44.79 Aligned_cols=320 Identities=15% Similarity=0.061 Sum_probs=176.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC---CC
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS---AE 100 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~---~~ 100 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. + .+.+.-+..+++.++.|.. +.. ..
T Consensus 79 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~~~~~a~-~~~~~~g~ 140 (500)
T 2j6l_A 79 PAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKI----------------L-VEGVGEVQEYVDICDYAVG-LSRMIGGP 140 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCC----------------H-HHHHHHHHHHHHHHHHHHH-HTTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------H-HHHHHHHHHHHHHHHHHHH-HHHHhcCc
Confidence 3444555666666666666665443334433211 0 0112224445555554432 222 12
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH--------HH
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY--------CA 171 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~--------AA 171 (438)
+.....+|...-.++.|+.-|++..|- -|| ...++..+||-.||+.=| +=|.. ..|.+-. +.
T Consensus 141 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~al 211 (500)
T 2j6l_A 141 ILPSERSGHALIEQWNPVGLVGIITAF---NFPVAVYGWNNAIAMICGNVCL--WKGAP----TTSLISVAVTKIIAKVL 211 (500)
T ss_dssp EECCSSTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHHHHHHHHHHHH
T ss_pred cccccCCCceeEEEEecccEEEEECCC---cchhhHHHHHHHHHHHhCCEEE--EECCC----ccHHHHHHHHHHHHHHH
Confidence 222223455555678999999999995 466 466788899999987544 44442 4454211 22
Q ss_pred HHcCCc-hhhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEec
Q 013679 172 KKAGVT-HILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 172 ~l~Gv~-eIy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD 242 (438)
..+|+. .++.+ ||...-.+|. .-|+||+|.==|..=|- +|+++- .|-..+ -|-| -+|-|
T Consensus 212 ~~aGlP~gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~g~~i~~~aa~~l~-----~v~lEL-GGk~--p~iV~ 279 (500)
T 2j6l_A 212 EDNKLPGAICSLTCGGADIGTAMA----KDERVNLLSFTGSTQVGKQVGLMVQERFG-----RSLLEL-GGNN--AIIAF 279 (500)
T ss_dssp HHTTCCGGGEEEECCSHHHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHHTTC-----EEEEEC-CCCE--EEEEC
T ss_pred HhhcCCcCeEEEEeCCHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHhccCCC-----ceEEEc-CCCC--ceEEC
Confidence 345764 33332 6665444554 24889999544443221 222211 144443 3555 34556
Q ss_pred CCCCHHHHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------H-------HH
Q 013679 243 IYASPVHIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------G-------EF 296 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------~-------~i 296 (438)
++||.+..|-.++.-+= ..-.|...++.... .. +++.+.+.+.++.+. . . +.
T Consensus 280 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 357 (500)
T 2j6l_A 280 EDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES-IH-DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGA 357 (500)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHH-HH-HHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHH
Confidence 67899887777654322 12334444444332 43 667777776666552 0 0 11
Q ss_pred HHHhhc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccCh
Q 013679 297 ASKALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDA 334 (438)
Q Consensus 297 a~~sl~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p 334 (438)
++.+.+ .| .++.++|+|||++++|..- +=-..|.++|.
T Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 437 (500)
T 2j6l_A 358 VEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437 (500)
T ss_dssp HHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCH
T ss_pred HHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 222211 02 2344789999999999953 22366788888
Q ss_pred HHHHhhc----ccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEE
Q 013679 335 EKWESII----ENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 335 ~~~l~~i----~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.....-. -.+|.|++..++. +.+.-+| .+|..|+.+..+++.|+..-++.
T Consensus 438 ~~a~~~~~~~~~~~G~V~vN~~~~--------~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 438 GRIFRWLGPKGSDCGIVNVNIPTS--------GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHHHHSTTSCCSSEEEESSCTT--------CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEE
T ss_pred HHHHHHHhhccCCeeEEEECCCCc--------cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEE
Confidence 7655444 3679999996542 1112234 35778888888999999888764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=95.86 E-value=0.71 Score=47.79 Aligned_cols=339 Identities=12% Similarity=0.104 Sum_probs=171.1
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN-VSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~-~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~ 101 (438)
....+-.+..+.+-+.++++.|+=..-.++...+..-..+.-+ ..|+.. -..+-++.++++++++.+...+...
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~-----~~~~~~~~~a~~~~~~~~~~~~~g~ 107 (468)
T 1vlu_A 33 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDL-----FKGDKFEVMLQGIKDVAELEDPVGK 107 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCT-----TSTTHHHHHHHHHHHHHHSCCSSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhh-----hhHHHHHHHHHHHHHHhhcCCCCCe
Confidence 4445556667777777777777655555544432100000000 011111 0223477788888888765443221
Q ss_pred eEE---ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH---HHH-HH---
Q 013679 102 SVE---NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE---VLY-CA--- 171 (438)
Q Consensus 102 ~~~---~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~---iL~-AA--- 171 (438)
... ..+|...-.++.|+.-|++..|- . |...++-.+||-.||+.=| +-|.. ..|. .|+ ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~P~GVV~~I~pw---N-P~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~a 177 (468)
T 1vlu_A 108 VKMARELDDGLTLYQVTAPVGVLLVIFES---R-PEVIANITALSIKSGNAAI--LKGGK----ESVNTFREMAKIVNDT 177 (468)
T ss_dssp EEEEEEEETTEEEEEEEEECCEEEEEESS---C-THHHHHHHHHHHHHTCEEE--EECCG----GGHHHHHHHHHHHHHH
T ss_pred ecccccCCCCceeEEEecCcceEEEEecc---C-hHHHHHHHHHHHHcCCEEE--EEcCC----ccHHHHHHHHHHHHHH
Confidence 111 12466667889999999999984 3 5777888999999998544 33431 2332 222 12
Q ss_pred -HH----cCCc----hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEec
Q 013679 172 -KK----AGVT----HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 172 -~l----~Gv~----eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD 242 (438)
.. +|+. .+.. +|...-.+|. .-|.||+|.==|.. ...|++.....-.| +=-+-|-+ -+|-|
T Consensus 178 L~e~~~~aGlP~gvv~vv~-~~~~~g~~L~----~~p~vd~I~fTGS~--~~g~~i~~~a~kpv-~lElGGk~--p~iV~ 247 (468)
T 1vlu_A 178 IAQFQSETGVPVGSVQLIE-TRQDVSDLLD----QDEYIDLVVPRGSN--ALVRKIKDTTKIPV-LGHADGIC--SIYLD 247 (468)
T ss_dssp HHHHHHHHCCCTTSEEECC-CC--CGGGGG----CTTTCCEEEEESCH--HHHHHHHHTCCSCB-TTBCSCCE--EEEEC
T ss_pred HHhhchhcCCCCCcEEEEC-CHHHHHHHHh----hCCCcCEEEEECCH--HHHHHHHHhcCCCE-EeecCCcc--ceEEC
Confidence 24 6654 2333 5532222222 34889999544442 22222221100001 11122333 34556
Q ss_pred CCCCHHHHHHhhhhccCcCCC---Cce-EEEecC-chhhHHHHHHHHHHHHh---cCCC-HHH-HHHh------------
Q 013679 243 IYASPVHIAADLLSQAEHGPD---SQV-VLVIVG-DGVDLDAIEQEISKQCQ---SLPR-GEF-ASKA------------ 300 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAEHd~~---a~~-vLvt~s-~~la~~~V~~ei~~ql~---~l~r-~~i-a~~s------------ 300 (438)
++||.+..|-.++.-+=.... |.. +||-.+ +++. +++.+++.+.-- .-|. ... ++.+
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G~C~a~~rvlV~~~id~f~-~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~P 326 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWW-EVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 326 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC----CCCCEEEEECTTSTTHH-HHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred CCCCHHHHHHHHHHHhcCCCCcCCcCcEEEEECCHHHHH-HHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCC
Confidence 679999887776654433322 222 444333 3453 666655554321 1111 122 2221
Q ss_pred ----------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCccccccc
Q 013679 301 ----------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDY 360 (438)
Q Consensus 301 ----------l~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY 360 (438)
+. .| .++.++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++..++....+=-
T Consensus 327 tvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~~~~~p 405 (468)
T 1vlu_A 327 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGV-DSSGVYWNASTRFADGFR 405 (468)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHC-CCSEEEESSCGGGCC---
T ss_pred ceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhC-CeeEEEEcCCCCCCCCCC
Confidence 11 12 4677899999999999963323 456778865 455666 479999997553210000
Q ss_pred cc-----CCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 361 AS-----GTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 361 ~a-----GpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+. |. -++|..|. |..+++.|++.-++..
T Consensus 406 fG~Gg~~G~----~~SG~g~~-G~~gl~~f~~~K~v~~ 438 (468)
T 1vlu_A 406 YGFGAEVGI----STSKIHAR-GPVGLDGLVSYQYQIR 438 (468)
T ss_dssp ------------------------CCSGGGEEEEEEEE
T ss_pred CCCCCCcce----ecCCCCCC-cchHHHHhcceEEEEE
Confidence 11 22 23566777 8889999998888764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=1.3 Score=45.41 Aligned_cols=326 Identities=18% Similarity=0.161 Sum_probs=172.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK-SAETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~-~~~~~ 102 (438)
...+-.+..+.+-+.++++-|+=..-.++..-+...+.. . .|+ ....+.++.++++++++...+. +..+.
T Consensus 48 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~--~ev------~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 118 (457)
T 3lns_A 48 DVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD-L--AEI------GAVLHEIDFALAHLDEWVAPVSVPSPDI 118 (457)
T ss_dssp SHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-H--HTH------HHHHHHHHHHHHHHHHHTSCEEECCCGG
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-H--HHH------HHHHHHHHHHHHHHHHhhcccccccccc
Confidence 344455566677777777777655555555543210000 0 011 1233445556666655543221 11111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH-HHH---Hc---C
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAK---KA---G 175 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-AA~---l~---G 175 (438)
..|...-.++.|+.-|++..|- .+|+ ...++-++||-.||+.=| +-|.. ..|.+-. -++ .+ |
T Consensus 119 ---~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~alP~g 187 (457)
T 3lns_A 119 ---IAPSECYVVQEPYGVTYIIGPF-NYPV-NLTLTPLIGAIIGGNTCI--IKPSE----TTPETSAVIEKIIAEAFAPE 187 (457)
T ss_dssp ---GCSCEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHTTCEEE--EECCT----TCHHHHHHHHHHHHHHCCTT
T ss_pred ---CCCcceEEEeecceEEEEECCC-cchH-HHHHHHHHHHHHcCCEEE--EECCC----CChHHHHHHHHHHHHhCCHh
Confidence 2344566789999999999995 3443 344556789999997543 44542 3443221 111 11 2
Q ss_pred CchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 176 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 176 v~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
+=.+. -||.....+|. + |+||+|.==|..=| ++|+++. . |-. -+-|-+= +|-|++||.+.
T Consensus 188 vv~vv-~g~~~~~~~L~----~-~~vd~V~fTGS~~~G~~i~~~aa~~l~-p----v~l-ElGGk~p--~iV~~dADl~~ 253 (457)
T 3lns_A 188 YVAVI-QGGRDENSHLL----S-LPFDFIFFTGSPNVGKVVMQAAAKHLT-P----VVL-ELGGKCP--LIVLPDADLDQ 253 (457)
T ss_dssp TEEEC-CCCHHHHHHHT----T-SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEE-ECCCCEE--EEECTTCCHHH
T ss_pred hEEEe-cCCHHHHHHHh----c-CCCCEEEEECCHHHHHHHHHHHhhccC-c----eEE-ECCCCCC--CeECCCCCHHH
Confidence 22222 25666666664 2 68999976665433 2232211 0 100 1223333 44566799988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC-CC---------H-------HHHHH---------
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL-PR---------G-------EFASK--------- 299 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l-~r---------~-------~ia~~--------- 299 (438)
.|-.++.-+ =.--.+...++... +.. +++.+.+.+.++.+ |. . +.++.
T Consensus 254 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~~~~~gg 331 (457)
T 3lns_A 254 TVNQLMFGKFINSGQTXIAPDYLYVHY-SVK-DALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGS 331 (457)
T ss_dssp HHHHHHHHHHGGGGCCTTSEEEEEEEG-GGH-HHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHHHhCCCCccCCceEEEcH-HHH-HHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCCeEEeCC
Confidence 777665322 11223444444332 243 55555555555433 10 0 01111
Q ss_pred ----------------------hhc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhcccccc
Q 013679 300 ----------------------ALG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGS 346 (438)
Q Consensus 300 ----------------------sl~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAGa 346 (438)
.+. .| .|+.++|+|||++++|.+-|-. ..|.++|.. .+..++ .+|.
T Consensus 332 ~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 410 (457)
T 3lns_A 332 QADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI-QSGD 410 (457)
T ss_dssp CEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS-CCSE
T ss_pred ccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC-Ccce
Confidence 111 13 3456899999999999944444 557788875 456666 4899
Q ss_pred cccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
|++..++... .+.-+|- +|..|+.|..+++.|+..-++..
T Consensus 411 v~vN~~~~~~-------~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 411 AQVNGVMLHA-------FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEESCCSGGG-------GCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEEcCCCCCC-------CCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 9999754211 1233444 45677777788888887776653
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=95.67 E-value=2.5 Score=43.95 Aligned_cols=328 Identities=14% Similarity=0.103 Sum_probs=176.4
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
..+-.+..+.+.+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-..-.-...
T Consensus 55 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~ 117 (486)
T 3pqa_A 55 ITKRYNILMNIAKQIKEKKEELAKILAIDAGKPI-----------------KQARVEVERSIGTFKLAAFYVKEHRDEVI 117 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 3444556667777777777765555555554321 11112244555555555432211000111
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHc----CCch
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKA----GVTH 178 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~----Gv~e 178 (438)
..+|...-.++.|+.-|++..|- -||- ..+...+||-.||+.=|+=.+|-. ..... +......+ |+.+
T Consensus 118 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlKps~~t---p~t~~~l~~l~~~al~~~GlP~ 191 (486)
T 3pqa_A 118 PSDDRLIFTRREPVGIVGAITPF---NFPLNLSAHKIAPAIATGNVIVHHPSSKA---PLVCIELAKIIENALKKYNVPL 191 (486)
T ss_dssp CCTTEEEEEEEEECSEEEEEECS---SSHHHHHHHHHHHHHHTTCEEEEEECTTS---CHHHHHHHHHHHHHHHHTTCCG
T ss_pred cCCCceeEEEEccccEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEECCCCc---hHHHHHHHHHHHHHHHhcCCCC
Confidence 12355667789999999999995 4664 345567899999975444333211 11111 22233344 7653
Q ss_pred -hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 179 -ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 179 -Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~-~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
++.+ | |...-.+|. .-|+||+|.==|..=|- |++..... -.|-. -+-|-+= +|-|++||.+..|-.
T Consensus 192 gvv~vv~g~~~~~g~~L~----~~p~vd~V~fTGS~~~g--~~i~~~aa~~~v~l-ELGGk~p--~iV~~dADl~~Aa~~ 262 (486)
T 3pqa_A 192 GVYNLLTGAGEVVGDEIV----VNEKVNMISFTGSSKVG--ELITKKAGFKKIAL-ELGGVNP--NIVLKDADLNKAVNA 262 (486)
T ss_dssp GGEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHH--HHHHHHCCSSEEEE-ECCCCEE--EEECTTSCHHHHHHH
T ss_pred CeEEEEeCCchHHHHHHH----hCCCccEEEEECChHHH--HHHHHHcCCCceee-ccCCcCc--EEEcCCCCHHHHHHH
Confidence 3322 3 333334443 24889999866664332 22211000 00111 1124333 444667999988777
Q ss_pred hhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcCC---
Q 013679 254 LLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGHS--- 304 (438)
Q Consensus 254 LLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~g--- 304 (438)
++.-+=.. -.|...++... +.. +++.+.+.+.++.+.- .+.++.+.+.|
T Consensus 263 i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 340 (486)
T 3pqa_A 263 LIKGSFIYAGQVCISVGMILVDE-SIA-DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKL 340 (486)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCCCccCCcEEEEeH-HHH-HHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 66433222 23444444433 353 7777777777665420 12333333221
Q ss_pred ----------------------------------eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccc
Q 013679 305 ----------------------------------FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGS 346 (438)
Q Consensus 305 ----------------------------------~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGa 346 (438)
.|+-++| |||++++|..--=| ..|.++|.. .+..++ .+|.
T Consensus 341 ~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 418 (486)
T 3pqa_A 341 LLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENL-EFGG 418 (486)
T ss_dssp EECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHS-CSSE
T ss_pred EecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC-Ccce
Confidence 1345678 99999999853322 567778864 566666 4899
Q ss_pred cccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEEeCH
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQSLTE 396 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~~s~ 396 (438)
|++..++... ..-+|-+ |..|+.|..+++.|++.-++..-..
T Consensus 419 v~vN~~~~~~--------~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 419 VVINDSSLFR--------QDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp EEESSCTTCC--------CTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEEeCCCCcC--------CCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 9999865411 1135544 5677888888999998877655433
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=95.66 E-value=2.6 Score=44.08 Aligned_cols=280 Identities=17% Similarity=0.123 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHhccCCCceE--EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSV--ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~--~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
-+..+++.++.|.....+..... ...+|...-.++.|+.-|++..|- .+|+ ...+.-.+||-.||+.=|+ -|..
T Consensus 130 ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~Pw-N~P~-~~~~~~~a~ALaaGN~VVl--KPs~ 205 (504)
T 3ek1_A 130 EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPW-NFPA-AMITRKAAPALAAGCTMIV--RPAD 205 (504)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEEE--ECCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCC-cchH-HHHHHHHHHHHHcCCEEEE--ECCC
Confidence 35667777776655332211111 123466677889999999999994 3333 3344567899999975443 3432
Q ss_pred CCCCCCHH-HHHHHHHcCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH---HHHhcCCCC
Q 013679 159 QDGSICKE-VLYCAKKAGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA---KMILQNSEA 224 (438)
Q Consensus 159 ~~G~i~p~-iL~AA~l~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~A---K~~v~~~~~ 224 (438)
.-..... +......+|+.. ++.+ | |...-.+|.- -|+||+|.==|..=| ++| |++...
T Consensus 206 -~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~----~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lE--- 277 (504)
T 3ek1_A 206 -LTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTS----NDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLE--- 277 (504)
T ss_dssp -TSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEE---
T ss_pred -cChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHhhhhhcCCeEec---
Confidence 1111222 223456677653 3322 4 5555555653 588999976665432 222 222211
Q ss_pred cccccCCCCCceEEEEecCCCCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------
Q 013679 225 MISIDMPAGPSEVLVIADIYASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-------- 292 (438)
Q Consensus 225 ~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-------- 292 (438)
+-|-+= +|-|++||.+..|..++.-+ =.--.+...++.. ++.. +++.+.+.+.++.+.
T Consensus 278 ------LGGk~p--~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 278 ------LGGNAP--FIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQ-RGVY-DKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp ------CCCCEE--EEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ------CCCCCe--eEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEe-hhHH-HHHHHHHHHHHhhcccCCCcccc
Confidence 124333 44466799988777665422 1122344444443 4454 777777777776651
Q ss_pred -------C-------HHHHHHhhcC------------------------------------C---eEEEeCCHHHHHHHh
Q 013679 293 -------R-------GEFASKALGH------------------------------------S---FMVFARDMLEGISFS 319 (438)
Q Consensus 293 -------r-------~~ia~~sl~~------------------------------------g---~ii~v~~l~ea~~~~ 319 (438)
. .+.++.+.+. | .|+-++|+|||++++
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 427 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQA 427 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence 0 1223333221 1 234578999999999
Q ss_pred hhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceee
Q 013679 320 NLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMT 390 (438)
Q Consensus 320 N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s 390 (438)
|..--=| ..|.++|.. .+..+++ +|.|++..++. .+.-+|-+ |..|..|..+++.|++.-+
T Consensus 428 N~~~~GL~a~v~t~d~~~a~~~a~~l~-aG~V~vN~~~~---------~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~ 497 (504)
T 3ek1_A 428 NDTIFGLAAYFYTENFSRAIRVSEALE-YGMVGHNTGLI---------SNEVAPFGGVKQSGLGREGSKYGIEEYLETKY 497 (504)
T ss_dssp HCSSCCSEEEEECCBHHHHHHHHHHSC-CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEE
T ss_pred hCCCCCeEEEEEcCCHHHHHHHHHhCC-cCeEEECCCCC---------CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEE
Confidence 9853222 556777765 4666774 99999996541 12335544 5678888889999988776
Q ss_pred EE
Q 013679 391 VQ 392 (438)
Q Consensus 391 ~~ 392 (438)
+.
T Consensus 498 v~ 499 (504)
T 3ek1_A 498 IC 499 (504)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=95.66 E-value=2.5 Score=44.01 Aligned_cols=289 Identities=16% Similarity=0.128 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEe--cCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSVEN--MKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~~~--~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP 157 (438)
-+..+++.++.|.....+..-.... .+|...-.++.|+.-|++..|- -||-.+ +...+||-.||+.=|+ -|.
T Consensus 110 Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps 184 (508)
T 3r64_A 110 EITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPW---NFPLNLSIRSVAPALAVGNAVVI--KPA 184 (508)
T ss_dssp HHHHHHHHHHHHTTSTTTCCEEEECCSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEE--ECC
T ss_pred HHHHHHHHHHHHHHHhhhhcCcccccCCCCceeEEEEecceEEEEECCC---cchHHHHHHHHHHHHhcCCEEEE--ECC
Confidence 3667777777665432221112221 3567778889999999999995 455443 4567899999975443 343
Q ss_pred CCCCCCCHHHH-----HHHHHcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcC--CCCc
Q 013679 158 SQDGSICKEVL-----YCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQN--SEAM 225 (438)
Q Consensus 158 ~~~G~i~p~iL-----~AA~l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~--~~~~ 225 (438)
. ..|.+- .....+|+. .++.+ | |...-.+|.- -|+||+|.==|..=|-.+ .+..+. .--.
T Consensus 185 ~----~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~----~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~ 256 (508)
T 3r64_A 185 S----DTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVT----HAVPKLISFTGSTPVGRRVGELAINGGPMKT 256 (508)
T ss_dssp T----TCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHH----CSSCSEEEEESCHHHHHHHHHHHHSSSSCCE
T ss_pred C----CChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhh----CCCccEEEEECCHHHHHHHHHHhhcccCCCc
Confidence 2 344322 244556654 23321 3 4544455542 488999976666433211 000000 0000
Q ss_pred ccccCCCCCceEEEEecCCCCHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C----
Q 013679 226 ISIDMPAGPSEVLVIADIYASPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R---- 293 (438)
Q Consensus 226 VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r---- 293 (438)
|-.. +-|-+= +|-|++||.+..|-.++.- +=.--.+...++.. ++.. +++.+.+.+.++.+. .
T Consensus 257 v~lE-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~ 331 (508)
T 3r64_A 257 VALE-LGGNAP--FVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVD-AAVH-DEFLEKFVEAVKNIPTGDPSAEGT 331 (508)
T ss_dssp EEEE-CCCCCE--EEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSSSC
T ss_pred eEee-cCCcCc--eEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEe-hhHH-HHHHHHHHHHHHhccCCCCccCCC
Confidence 1111 124443 4446679998877666542 22223333344443 3453 777777777666641 0
Q ss_pred --------------HHHHHHhhcC-----------------------------------C---eEEEeCCHHHHHHHhhh
Q 013679 294 --------------GEFASKALGH-----------------------------------S---FMVFARDMLEGISFSNL 321 (438)
Q Consensus 294 --------------~~ia~~sl~~-----------------------------------g---~ii~v~~l~ea~~~~N~ 321 (438)
.+.++.+.+. | .++.++|+|||++++|.
T Consensus 332 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 411 (508)
T 3r64_A 332 LVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANA 411 (508)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTS
T ss_pred cccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhC
Confidence 1223322211 2 23457899999999998
Q ss_pred hcccc-ceecccChH---HHHhhcccccccccCCCCccccccc-ccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 322 YAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDY-ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 322 ~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY-~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.--=| ..|.++|.. .+..++ .+|.|++..++....... +.| -..+|+.|+.|..+++.|++.-++.
T Consensus 412 ~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~~~~~~PfGG----~~~SG~Gr~~G~~~l~~ft~~k~v~ 482 (508)
T 3r64_A 412 SDFGLSAAVWSKDIDRAAQFALQI-DSGMVHINDLTVNDEPHVMFGG----SKNSGLGRFNGDWAIEEFTTDRWIG 482 (508)
T ss_dssp SSCCSCEEEECSCHHHHHHHHTTS-CSSEEEECC------------------------CCCHHHHHHHTEEEEEEE
T ss_pred CCCCcEEEEEcCCHHHHHHHHHhC-CcceEEEcCCCCCCCCCCCcCC----cCCCCCCcCccHHHHHHhhceEEEE
Confidence 64322 567788874 466666 589999998653210000 111 1356778888888999998877654
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.56 E-value=2.3 Score=44.43 Aligned_cols=281 Identities=17% Similarity=0.145 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHhccCC-CceEEe-cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCC
Q 013679 82 FDVAYNNIYAFHLAQKSA-ETSVEN-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~~-~~~~~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
+..+++.++.|.+.-.+- .-.+.. .+|...-.++.|+.-|++..|- -|| ...+...+||-.||+.=|+= |..
T Consensus 125 v~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~ 199 (515)
T 2d4e_A 125 VARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPW---NAPLMLSTWRIAPALAFGNTVVLK--PAE 199 (515)
T ss_dssp HHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCS---SSHHHHHHHHHHHHHHTTCCEEEE--CCT
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCC---CchhhhhhhhhhHHHHcCCeeeec--CCC
Confidence 566777777765432211 111121 3466667789999999999995 477 55667788999999864443 431
Q ss_pred CCCCCCH-HHHHHHHHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCccc
Q 013679 159 QDGSICK-EVLYCAKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMIS 227 (438)
Q Consensus 159 ~~G~i~p-~iL~AA~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~Vg 227 (438)
.-.... .+....+.+|... ++. -| |.+.-.+|. .-|+||+|.==|..=| ++|+.+. .|-
T Consensus 200 -~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~I~~~aa~~l~-----~v~ 269 (515)
T 2d4e_A 200 -WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALV----AHPLVPLLTLTGETETGKIVMRNAADHLK-----RLS 269 (515)
T ss_dssp -TSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHGGGTC-----EEE
T ss_pred -CcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHH----hCCCcCEEEEeCcHHHHHHHHHHHhhcCC-----ceE
Confidence 111222 2223455666542 222 13 433333443 2488999954444322 2222110 011
Q ss_pred ccCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------
Q 013679 228 IDMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------- 293 (438)
Q Consensus 228 ID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------- 293 (438)
.. +-|-+= +|-|++||.+..|-.++.-+=. --.|...++... +.. +++.+.+.+.++.+.-
T Consensus 270 lE-LGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~ 344 (515)
T 2d4e_A 270 PE-LGGKSP--ALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEE-KIF-EDFVGKVVERARAIRVGHPLDPETEV 344 (515)
T ss_dssp EE-CCCCCE--EEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSB
T ss_pred ec-CCCcCe--EEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeh-hHH-HHHHHHHHHHHhhcccCCcccccCcc
Confidence 11 224443 4445678998877776643211 123333333322 343 6666656555544320
Q ss_pred ------------HHHHHHhh--------------------------------------------c-CC---eEEEeCCHH
Q 013679 294 ------------GEFASKAL--------------------------------------------G-HS---FMVFARDML 313 (438)
Q Consensus 294 ------------~~ia~~sl--------------------------------------------~-~g---~ii~v~~l~ 313 (438)
.+.++.+. + .| .|+.++|+|
T Consensus 345 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~~~~d 424 (515)
T 2d4e_A 345 GPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEE 424 (515)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEeeCCHH
Confidence 01111111 0 12 245578999
Q ss_pred HHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCccccc
Q 013679 314 EGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDS 384 (438)
Q Consensus 314 ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~ 384 (438)
||++++|..--=| ..|.++|.. .+..++ .+|.|++..++.. +.-+|- +|..|+.|..+++.
T Consensus 425 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ 494 (515)
T 2d4e_A 425 EALRKANDTKYGLAAYVFTRDLERAHRLALEL-EAGMVYLNSHNVR---------HLPTPFGGVKGSGDRREGGTYALDF 494 (515)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHS-CSSEEEESSSCCC---------CTTSCBCCSGGGBCSCBSHHHHHHH
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhC-CeeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHH
Confidence 9999999853222 556677754 566776 5999999976431 122444 45567777778888
Q ss_pred ccceeeEE
Q 013679 385 FLKYMTVQ 392 (438)
Q Consensus 385 FlK~~s~~ 392 (438)
|+..-++.
T Consensus 495 ~~~~K~v~ 502 (515)
T 2d4e_A 495 YTDLKTIA 502 (515)
T ss_dssp HEEEEEEE
T ss_pred hCceeEEE
Confidence 98766654
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=2.6 Score=43.45 Aligned_cols=318 Identities=16% Similarity=0.119 Sum_probs=173.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE--
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV-- 103 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~-- 103 (438)
.+-.+..+.+.+.++++-|+=..-.++..-+- + .+.+.-+..+++.++.|.+. ..+ |.-
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~l~~~a~~-~~~-~~~~~ 126 (479)
T 2imp_A 66 IERASWLRKISAGIRERASEISALIVEEGGKI----------------Q-QLAEVEVAFTADYIDYMAEW-ARR-YEGEI 126 (479)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHTT-TTT-CCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHH-HHH-hhCCc
Confidence 33344555555566666555444444444211 0 11223366677777766542 222 211
Q ss_pred -Ee-cCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-
Q 013679 104 -EN-MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 178 (438)
Q Consensus 104 -~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e- 178 (438)
.. .+|...-.++.|+.-|++..|- -||-. .+...+||-.||+.=| +-|.. .-.... .+....+.+|...
T Consensus 127 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~~aGlP~g 200 (479)
T 2imp_A 127 IQSDRPGENILLFKRALGVTTGILPW---NFPFFLIARKMAPALLTGNTIV--IKPSE-FTPNNAIAFAKIVDEIGLPRG 200 (479)
T ss_dssp ECCSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT-TSCHHHHHHHHHHHHHTCCTT
T ss_pred cccCCCCceeEEEEeccceEEEECCC---chHHHHHHHHHHHHHHcCCEEE--EECCc-cchHHHHHHHHHHHHhCCCcC
Confidence 11 2465667788999999999994 45644 3457889999998544 33432 111111 2233455666643
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. .| |.+.-.+|. +-|+||+|.==|..-| ++|+.+. .|-.. +-|-+= +|-|++||.+.
T Consensus 201 vv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~ 268 (479)
T 2imp_A 201 VFNLVLGRGETVGQELA----GNPKVAMVSMTGSVSAGEKIMATAAKNIT-----KVCLE-LGGKAP--AIVMDDADLEL 268 (479)
T ss_dssp SEEECCSCTTTHHHHHH----HCTTEEEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHH
T ss_pred eEEEEECCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEE-cCCcCe--EEECCCCCHHH
Confidence 222 23 433334443 2488999974344322 2221110 01111 225553 44466789998
Q ss_pred HHHhhhhccCcCC----CCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C-------------------HHHHHHhh
Q 013679 250 IAADLLSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R-------------------GEFASKAL 301 (438)
Q Consensus 250 vAaDLLaQAEHd~----~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r-------------------~~ia~~sl 301 (438)
.|-.++.-+=... .+. -++|-.+ .. +++.+.+.+.++.+. . .+.++.+.
T Consensus 269 aa~~i~~~~~~n~GQ~C~a~~rv~V~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 269 AVKAIVDSRVINSGQVCNCAERVYVQKG--IY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHTTSSTTTTCCSSSCSEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCcCcCCcEEEEehh--hH-HHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 8887765443322 222 3444333 43 666666666665542 0 01111111
Q ss_pred c--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---H
Q 013679 302 G--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 336 (438)
Q Consensus 302 ~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~ 336 (438)
+ .| .++-++|+|||++++|..- +--..|.++|.. .
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 0 01 2344789999999999862 123567788865 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+..++ .+|.|++..++.. +.-+| .+|..|+.|..+++.|+..-++..
T Consensus 426 ~~~~l-~~G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 426 AIKGL-KFGETYINRENFE---------AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHC-CSSEEEESSCCCC---------CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHhC-CEeEEEECCCCCC---------CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 66666 5999999975532 22355 456778888888889988877654
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.52 E-value=2.7 Score=43.49 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=141.8
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-hhh--c
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-ILK--A 182 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e-Iy~--v 182 (438)
....++.|+.-|++..|- .+|+ ++.+...+||-.||+.=| +-|.. ..|. +......+|+.+ ++. -
T Consensus 132 ~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~aGlP~gvv~vv~ 203 (490)
T 3ju8_A 132 TAVLRHKPHGVVAVFGPY-NFPG-HLPNGHIVPALLAGNCVV--FKPSE----LTPKVAELTLKAWIQAGLPAGVLNLVQ 203 (490)
T ss_dssp EEEEEEEECSEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEE--EECCT----TCHHHHHHHHHHHHHTTCCTTTEEECC
T ss_pred eeeEEECCCCEEEEECCC-cchH-HHHHHHHHHHHHcCCeEE--EECCC----CCcHHHHHHHHHHHHhCcCcCeEEEEe
Confidence 344568999999999995 3443 566677889999997544 33432 3343 223455677652 222 3
Q ss_pred chHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcc-cccCCCCCceEEEEecCCCCHHHHHHhhhhccCc
Q 013679 183 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMI-SIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 260 (438)
Q Consensus 183 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~V-gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH 260 (438)
||...-.+|.- -|+||+|.==|..=|-.. .+..+...-.| ... +-|-+= +|-|++||.+..|..++.-+=.
T Consensus 204 g~~~~~~~L~~----~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lE-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~ 276 (490)
T 3ju8_A 204 GGRETGVALAA----HRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALE-MGGNNP--LVVEEVADLDAAVYTIIQSAFI 276 (490)
T ss_dssp CSHHHHHHHHT----CTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEE-CCCCEE--EEECCCSCHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHh----CCCcCEEEEECcHHHHHHHHHHhhccCCCcEEee-cCCCCe--EEECCCCCHHHHHHHHHHHHHh
Confidence 56655555652 588999986666543222 11111100001 111 224443 4456679999888777643322
Q ss_pred C----CCCceEEEecCchhhHHHHHHHHHHHHhcCC-----C------------------HHHHHHhhcCC---------
Q 013679 261 G----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-----R------------------GEFASKALGHS--------- 304 (438)
Q Consensus 261 d----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-----r------------------~~ia~~sl~~g--------- 304 (438)
. -.+...++....... +++.+.+.+.++.+. . .+.++.+.+.|
T Consensus 277 n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 355 (490)
T 3ju8_A 277 SAGQRCTCARRLLVPQGAWG-DALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ 355 (490)
T ss_dssp GGGCSTTSEEEEEEESSHHH-HHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred cCCCCCcCCCEEEEECCccH-HHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 2 233333333333222 555555555554441 0 12333332211
Q ss_pred -------------------------------eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhccccccccc
Q 013679 305 -------------------------------FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFL 349 (438)
Q Consensus 305 -------------------------------~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFl 349 (438)
.++-++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++
T Consensus 356 ~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~v~v 434 (490)
T 3ju8_A 356 PIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES-RAGIVNW 434 (490)
T ss_dssp CSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHC-CSSEEEE
T ss_pred cCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhc-CcceEEE
Confidence 2345789999999999853332 667788874 455555 5899999
Q ss_pred CCCCcccccccccCCCCCCCCCCccccccCcccccccceee
Q 013679 350 GEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMT 390 (438)
Q Consensus 350 G~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s 390 (438)
..++. +.++-+|-+|. +.+|--+.+.|+..-+
T Consensus 435 N~~~~--------~~~~~~PfGG~-~~SG~~~~~~~~~~k~ 466 (490)
T 3ju8_A 435 NKQLT--------GAASSAPFGGI-GASGNHRPSAYYAADY 466 (490)
T ss_dssp SSCSS--------CCCTTSEECCC-GGGBSSCCEETTHHHH
T ss_pred CCCcC--------CCCCCCCcCCc-cccchhHHHhhheeEE
Confidence 97654 23455788774 4444445566654433
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=3 Score=43.42 Aligned_cols=321 Identities=16% Similarity=0.127 Sum_probs=174.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+..+.+.+.++++.|+=..-.++..-+- +. +.+.-+..+++.++.|.+.-..- .-.
T Consensus 78 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~g~~ 140 (503)
T 1a4s_A 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKT----------------IT-EAEYDIDAAWQCIEYYAGLAPTLSGQH 140 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHGGGCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3444556666777777777666554445444221 00 11223566666777665432211 111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-h
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 179 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-I 179 (438)
+...+|...-.++.|+.-|++..|- -||- ..+...+||-.||+. ||+-|.. .-.... .+....+.+|... +
T Consensus 141 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~ta~~l~~l~~~aGlP~gv 214 (503)
T 1a4s_A 141 IQLPGGAFAYTRREPLGVCAGILAW---NYPFMIAAWKCAPALACGNA--VVFKPSP-MTPVTGVILAEIFHEAGVPVGL 214 (503)
T ss_dssp EECGGGCEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCceeEEEEecCceEEEECCC---cchHHHHHHHHHHHHHcCCE--EEEECCC-CChHHHHHHHHHHHHhCCCcCe
Confidence 1222455566788999999999995 4663 345578899999985 3344442 111222 2223455666542 3
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEE--ecCCc----HHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKI--FGPGN----QYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkI--vGPGN----~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
+.+ | | +.-.+|. .-|.||+| +|--. ++-++|+.+- .|-.. +-|-+= +|-|++||.+..
T Consensus 215 v~vv~g~~-~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~~-----~v~lE-LGGk~p--~IV~~dADl~~A 281 (503)
T 1a4s_A 215 VNVVQGGA-ETGSLLC----HHPNVAKVSFTGSVPTGKKVMEMSAKTVK-----HVTLE-LGGKSP--LLIFKDCELENA 281 (503)
T ss_dssp EEECCCSH-HHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEEecCc-hHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-----ceEEe-cCCcCe--EEECCCCCHHHH
Confidence 322 4 5 4444454 24889999 45432 1222332211 01111 234453 444566899888
Q ss_pred HHhhhhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh---
Q 013679 251 AADLLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 300 (438)
Q Consensus 251 AaDLLaQAEHd----~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s--- 300 (438)
|-.++.-+=.. -.+. -+||-.+ .. ++..+.+.+.++.+.- .+.++.+
T Consensus 282 a~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 282 VRGALMANFLTQGQVCTNGTRVFVQRE--IM-PQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHTTCGGGGCCTTCCCEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcCCcEEEEehH--HH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 77766533222 2222 3444333 43 6666666655554420 0111111
Q ss_pred --------------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH
Q 013679 301 --------------------------------------L--G-HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE 335 (438)
Q Consensus 301 --------------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~ 335 (438)
+ + .| .++-++|+|||++++|..-- --..|.++|..
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 1 0 12 24557899999999998532 23567788874
Q ss_pred ---HHHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 336 ---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 ---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.+..++ .+|.|++..++.. +..+| .+|..|..|..+++.|+..-++..
T Consensus 439 ~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 439 RAHRVAANL-EAGTCYINTYSIS---------PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHS-CSSEEEESCCCCC---------CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHHC-ceeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 466676 5999999976541 12245 446678888888999998877654
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=95.35 E-value=2.5 Score=44.08 Aligned_cols=318 Identities=15% Similarity=0.151 Sum_probs=162.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHhccCCCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVK-EAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~-~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
...+-.+..+++-+.++++.|+=..-.++..-+. + .+.+ .-+..+++.++.|.+......+.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~-------------~~a~~~ev~~~~~~~~~~a~~~~~~~~~ 145 (497)
T 3i44_A 83 SPHERLGFVEKILEIYEKRSSDMAKTISMEMGAP----I-------------DMALNAQTATGSSHIRNFIKAYKEFSFQ 145 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H-------------HHHHHTHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3444455666777777777776555555544321 0 1111 12445555565554432221222
Q ss_pred EEecCceEEEEE-EEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-
Q 013679 103 VENMKGVRCKRV-ARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r-~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e- 178 (438)
....+|...-.+ +.|+.-|++..|- -||- ..+.-.+||-.||+.=| +-|.. .-..... +......+|+..
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~eaGlP~g 219 (497)
T 3i44_A 146 EALIEGNEQAILHYDAIGVVGLITPW---NWPMNQVTLKVIPALLAGCTMV--LKPSE-IAPLSAMLFAEILDEAALPSG 219 (497)
T ss_dssp EESSTTCSSCEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHHTCEEE--EECCT-TSCHHHHHHHHHHHHTTCCTT
T ss_pred ccccCCceeEEEeecCceEEEEECCC---cchHHHHHHHHHHHHHcCCEEE--EECCc-ccHHHHHHHHHHHHHhCcCCC
Confidence 221123323344 8999999999995 4663 44456789999997644 34432 1111122 223455666542
Q ss_pred ---hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ---ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 ---Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
|..-.|...-.+|.- -|+||+|.=-|..=| ++|+.+.- |-. -+-|-+=++ -|++|| +.
T Consensus 220 vvnvv~g~~~~~g~~L~~----hp~v~~I~FTGS~~~G~~i~~~aa~~~k~-----v~l-ElGGk~p~I--V~~dAD-~~ 286 (497)
T 3i44_A 220 VFNLINGDGANVGSYLSA----HPDLEMISFTGSTRAGKDISKNASNTLKR-----VCL-ELGGKGANI--IFADAD-ID 286 (497)
T ss_dssp SEEECCCCTTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTCE-----EEE-ECCCCCEEE--ECTTSC-TT
T ss_pred eEEEEeCCChHHHHHHHh----CCCcCEEEEeCcHHHHHHHHHHHhhcCCc-----eee-ccCCCCceE--ECCChh-HH
Confidence 222225444455542 588999976664322 22321100 100 122334333 345577 65
Q ss_pred HHHhhhhc----cCcCCCCce-EEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc
Q 013679 250 IAADLLSQ----AEHGPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG 302 (438)
Q Consensus 250 vAaDLLaQ----AEHd~~a~~-vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~ 302 (438)
.|..++.- +=..-.+.. +||-. +.. +++.+.+.+.++.+.- .+.++.+.+
T Consensus 287 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~--~i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 363 (497)
T 3i44_A 287 ALQRGVRHCFYNSGQSCNAPTRMLVEQ--AIY-DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGID 363 (497)
T ss_dssp HHHHHHHHHHGGGGCCTTCCCEEEEEG--GGH-HHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccCCEEEEcH--HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 55444321 111222333 44432 243 6665555555543310 011221111
Q ss_pred -----------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH--
Q 013679 303 -----------------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE-- 335 (438)
Q Consensus 303 -----------------------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~-- 335 (438)
.| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 364 ~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 443 (497)
T 3i44_A 364 EGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKC 443 (497)
T ss_dssp TTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 12 2345789999999999853222 567788864
Q ss_pred -HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 336 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 336 -~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
.+..+++ +|.|++.. .. .+ .-+|-+ |..|..|..+++.|+..-++
T Consensus 444 ~~~a~~l~-aG~V~iN~-~~-------~~--~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 444 RRIAAQVR-SGMVEVNG-HE-------LP--GGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp HHHHHHSC-CSEEEETT-CC-------CC--TTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred HHHHHhCC-cCeEEECC-CC-------CC--CCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 5667774 99999993 11 11 224544 45666677778888776554
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=3.7 Score=42.96 Aligned_cols=323 Identities=15% Similarity=0.168 Sum_probs=171.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. +.-. ...-+..+++.++.|...-..- .-.
T Consensus 96 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea------------~~~Ev~~~~~~~~~~a~~~~~~~g~~ 159 (517)
T 2o2p_A 96 NARDRGRLLYRLADVMEQHQEELATIEALDAGAV----YTLA------------LKTHVGMSIQTFRYFAGWCDKIQGAT 159 (517)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHH------------HHTTTHHHHHHHHHHHHHGGGCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHH------------HHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3444556667777777777776555555555321 1000 0011344555555554321110 001
Q ss_pred EEe----cCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCC
Q 013679 103 VEN----MKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGV 176 (438)
Q Consensus 103 ~~~----~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv 176 (438)
+.. .++...-.++.|+.-|++..|-- ||-.+ +.-.+||-.||+.=|+= |.. .-.... .+......+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGNtVVlK--ps~-~tp~ta~~l~~l~~eaGl 233 (517)
T 2o2p_A 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWN---YPLMMLSWKTAACLAAGNTVVIK--PAQ-VTPLTALKFAELTLKAGI 233 (517)
T ss_dssp ECCCCCTTSCEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEEE--CCT-TCCHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCceEEEEecCCccEEEECCCc---chHHHHHHHHHHHHHcCCEEEEE--CCC-ccHHHHHHHHHHHHHhCC
Confidence 111 23435567789999999999953 56444 45677999999864443 432 111122 22334556665
Q ss_pred ch-hhh--cc-hHHHHHHHhhcCCCCCCceEE--ecCCcH----HHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCC
Q 013679 177 TH-ILK--AG-GAQAISAMAWGTESCPKVEKI--FGPGNQ----YVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYA 245 (438)
Q Consensus 177 ~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkI--vGPGN~----yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~A 245 (438)
.. ++. .| |...-.+|. .-|+||+| +|--.. +-++| +.+- . |-.. +-|-+=+ |-+++|
T Consensus 234 P~gvv~vv~g~g~~~g~~L~----~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk-~----v~lE-LGGk~p~--IV~~dA 301 (517)
T 2o2p_A 234 PKGVVNILPGSGSLVGQRLS----DHPDVRKIGFTGSTEVGKHIMKSCALSNVK-K----VSLE-LGGKSPL--IIFADC 301 (517)
T ss_dssp CTTSEEECCSCHHHHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHTCC-E----EEEE-CCCCEEE--EECTTS
T ss_pred CcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEECCHHHHHHHHHHhHHhcCC-e----EEEE-CCCcCeE--EECCCC
Confidence 42 222 24 655555554 24889999 554322 22333 2111 0 1111 2255543 444568
Q ss_pred CHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHH
Q 013679 246 SPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASK 299 (438)
Q Consensus 246 np~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~ 299 (438)
|.+..|-.++.-+ =.--.+...++... +.. +++.+.+.+.++.+.- ...++.
T Consensus 302 Dl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~ 379 (517)
T 2o2p_A 302 DLNKAVQMGMSSVFFNKGENCIAAGRLFVEE-SIH-NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQR 379 (517)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCeEEEEeH-HHH-HHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 9988777665422 11233444444332 243 6666666666655420 112222
Q ss_pred hhcC--------------------------------------C---eEEEeCC--HHHHHHHhhhhc-cccceecccChH
Q 013679 300 ALGH--------------------------------------S---FMVFARD--MLEGISFSNLYA-PEHLIVNVKDAE 335 (438)
Q Consensus 300 sl~~--------------------------------------g---~ii~v~~--l~ea~~~~N~~A-PEHLel~~~~p~ 335 (438)
+.+. | .++-++| +|||++++|..- +=-..|.++|..
T Consensus 380 a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~ 459 (517)
T 2o2p_A 380 GVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459 (517)
T ss_dssp HHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHH
T ss_pred HHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHH
Confidence 2111 1 2344788 999999999852 123567788864
Q ss_pred ---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 336 ---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 336 ---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+..++ .+|.|++..+... +.-+|-+ |..|..|..+++.|+..-++.
T Consensus 460 ~a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~ 514 (517)
T 2o2p_A 460 KALYVSDKL-QAGTVFINTYNKT---------DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514 (517)
T ss_dssp HHHHHHHHC-CSSEEEESCSSCC---------CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhc-CEeEEEECCCCCC---------CCCCCcCCcCcCCcCccChHHHHHHhCCceEEE
Confidence 566777 5999999975321 1235544 556666667788888777654
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=95.06 E-value=1.1 Score=50.95 Aligned_cols=285 Identities=18% Similarity=0.174 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHHhccC---CCceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEe
Q 013679 79 KEAFDVAYNNIYAFHLAQKS---AETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLA 154 (438)
Q Consensus 79 ~~ai~~A~~nI~~fh~~q~~---~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~ 154 (438)
+.-+..+++.++.|...-.+ .........|.....++.|+.-|++..|- -|| ...+..++||-.||+. ||+
T Consensus 608 ~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~Pw---NfPl~i~~~~va~ALAAGNt--VVl 682 (1001)
T 3haz_A 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPW---NFPLAIFLGQVTAALMAGNS--VVA 682 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCC---CChHHHHHHHHHHHHHcCCE--EEE
Confidence 34466777777777653221 11112234566777889999999999994 355 4455677899999974 444
Q ss_pred cCCCCCCCCCHHH----HHHHHHcCCch----hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhc
Q 013679 155 TPPSQDGSICKEV----LYCAKKAGVTH----ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQ 220 (438)
Q Consensus 155 TPP~~~G~i~p~i----L~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~ 220 (438)
-|.. ..|.+ ....+.+|+.+ +..-.|.. -.+|. +-|.||+|.==|..=|. +|++. +
T Consensus 683 KPse----~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~----~~p~Vd~V~FTGSt~vGr~I~~~aA~~~-~ 752 (1001)
T 3haz_A 683 KPAE----QTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALT----AHPDIAGVVFTGSTEVARSINRALAAKD-G 752 (1001)
T ss_dssp ECCT----TCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHSS-S
T ss_pred ecch----hhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHH----hCCCcCEEEecCCHHHHHHHHHHHhccc-C
Confidence 4542 34432 22344556542 22222444 34443 24889999877765442 23210 0
Q ss_pred CCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----
Q 013679 221 NSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---- 292 (438)
Q Consensus 221 ~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---- 292 (438)
. ..--+=-+-|-+ -+|-|++||++.++.+++.-+=.. -.|...|+. .++.. +++.+.+.+.++.+.
T Consensus 753 ~--l~pv~lElGGkn--p~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV-~e~i~-d~f~~~L~~~~~~l~vGdp 826 (1001)
T 3haz_A 753 P--IVPLIAETGGIN--AMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFV-QEDVA-DRMIEMVAGAARELKIGDP 826 (1001)
T ss_dssp C--CCCEEEECCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE-EHHHH-HHHHHHHHHHHHTCCBSCT
T ss_pred C--CceEEeecCCcc--eEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeec-cHHHH-HHHHHHHHHHHHhcCCCCc
Confidence 0 000011123333 245588899999998887543222 234444444 34464 888888877777662
Q ss_pred -----------C-------HHHHHHhh------------------------------c---CCe---EEEeCC--HHHHH
Q 013679 293 -----------R-------GEFASKAL------------------------------G---HSF---MVFARD--MLEGI 316 (438)
Q Consensus 293 -----------r-------~~ia~~sl------------------------------~---~g~---ii~v~~--l~ea~ 316 (438)
. ...+..+. . .|- |+-++| +|||+
T Consensus 827 ~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~~~~G~fv~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI 906 (1001)
T 3haz_A 827 SDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVL 906 (1001)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECCCCSSSCCCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHhcCeEeccccCCCCcEEeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHH
Confidence 0 11222211 1 121 333564 89999
Q ss_pred HHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccc-cCccccccc
Q 013679 317 SFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMY-GGVSLDSFL 386 (438)
Q Consensus 317 ~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~-sgLsv~~Fl 386 (438)
+++|..--=| ..|.++|.. .+..++ .+|.|++..++.-.. +..+|- +|+.+.. |..++..|+
T Consensus 907 ~~aN~t~yGLta~V~T~d~~~a~~~a~~l-~aG~V~VN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~gl~~ft 978 (1001)
T 3haz_A 907 RAIERTGYGLTLGVHSRIDDSIEAIIDRV-QVGNIYVNRNMIGAV-------VGVQPFGGNGLSGTGPKAGGPHYLARFA 978 (1001)
T ss_dssp HHHHHTCCCSEEEEECSCHHHHHHHHHHC-CCSEEEESSCSCCCC-------TTTSCBCCCGGGBCCCCBTSTTSGGGGE
T ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHhC-CeeeEEEeCCCcCCC-------CCCCCCCCcccCcCCCCCCCHHHHHHhc
Confidence 9999865444 677888875 455565 599999998653221 112343 3555443 446778887
Q ss_pred ceeeEE
Q 013679 387 KYMTVQ 392 (438)
Q Consensus 387 K~~s~~ 392 (438)
..-++.
T Consensus 979 ~~K~v~ 984 (1001)
T 3haz_A 979 TEQTVT 984 (1001)
T ss_dssp EEEEEE
T ss_pred eeeEEE
Confidence 766654
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=3.7 Score=42.34 Aligned_cols=326 Identities=14% Similarity=0.144 Sum_probs=174.2
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+-+.++++.|+=..-.++.+-+...+. +. .|+ . ...+-++.++++++++...+.....
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~--~ev-----~-~~~~~~~~~~~~~~~~~~~~~~~~~- 106 (469)
T 3sza_A 37 RPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNA-YY--EEV-----V-YVLEEIEYMIQKLPEWAADEPVEKT- 106 (469)
T ss_dssp CSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HH--TTH-----H-HHHHHHHHHHHHHHHHHSCEECCCC-
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HH--HHH-----H-HHHHHHHHHHHHHHhhhcccccCcc-
Confidence 344455566777778888888876666666665321000 00 111 1 2344566777777777643322211
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHH------c
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKK------A 174 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l------~ 174 (438)
.. ..+-..-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=| +-|.. ..|.+- .-+.+ .
T Consensus 107 ~~-~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~vV--lKps~----~tp~t~~~l~~l~~~alP~ 176 (469)
T 3sza_A 107 PQ-TQQDELYIHSEPLGVVLVIGTW---NYPFNLTIQPMVGAIAAGNAVV--LKPSE----LSENMASLLATIIPQYLDK 176 (469)
T ss_dssp GG-GTTSEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCT----TSHHHHHHHHHHHHHHSCT
T ss_pred cc-CCCccceeeccCCCEEEEECCC---cchHHHHHHHHHHHHHcCCEEE--EECCC----CChHHHHHHHHHHHHhCCc
Confidence 11 1233455678999999999995 355 445566789999997544 44542 344322 11222 1
Q ss_pred CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 175 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 175 Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
|+=.|.. ||...+.+|.- .+||+|.==|..=| ++|+.+. . |-.. +-|-|=+ |-|++||.+
T Consensus 177 gvv~vv~-g~~~~~~~ll~-----~~vd~I~FTGS~~vG~~i~~~aa~~lk-p----v~lE-LGGk~p~--iV~~dADl~ 242 (469)
T 3sza_A 177 DLYPVIN-GGVPETTELLK-----ERFDHILYTGSTGVGKIIMTAAAKHLT-P----VTLE-LGGKSPC--YVDKNCDLD 242 (469)
T ss_dssp TTSCBCC-CSHHHHHHHTT-----SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEEE-CCCCCEE--EECTTSCHH
T ss_pred ceEEEEE-CCHHHHHHHHh-----cCCCEEEEECCHHHHHHHHHHHhhccC-c----eEEe-cCCCCce--EECCCCCHH
Confidence 3323322 55555566541 26999876665322 2332211 0 1111 1244433 445679998
Q ss_pred HHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC---CC-----------H---HHHHHh-------
Q 013679 249 HIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL---PR-----------G---EFASKA------- 300 (438)
Q Consensus 249 ~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l---~r-----------~---~ia~~s------- 300 (438)
..|..++.-+ =.--.+...++.. ++.. +++.+.+.+.++.+ |. + +-+.+-
T Consensus 243 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~ 320 (469)
T 3sza_A 243 VACRRIAWGKFMNSGQTCVAPDYILCD-PSIQ-NQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA 320 (469)
T ss_dssp HHHHHHHHHHHGGGGCCTTSCCEEEEC-GGGH-HHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHhcCCCCCCCCcEEEEe-hhHH-HHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEE
Confidence 8776665322 1112333333333 2232 55555444444321 10 0 101100
Q ss_pred --------------------------hc---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhhcccc
Q 013679 301 --------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIENA 344 (438)
Q Consensus 301 --------------------------l~---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~~l~~i~nA 344 (438)
+. .| .|+-++|+|||++++|..- +=-..|.++|.. .+..+++ +
T Consensus 321 ~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~-~ 399 (469)
T 3sza_A 321 YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS-S 399 (469)
T ss_dssp ECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC-C
T ss_pred eCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC-c
Confidence 11 13 2455799999999999853 223667788865 4566664 8
Q ss_pred cccccCCCCcc------cccccccCCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 345 GSVFLGEWTPE------SVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 345 GaiFlG~~sp~------a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
|.|++..++.- +||-+ -.+|..|+.|.-+++.|+..-++..
T Consensus 400 G~V~vN~~~~~~~~~~~PfGG~--------k~SG~Gr~~G~~g~~~ft~~K~v~~ 446 (469)
T 3sza_A 400 GGVAANDVIVHITLHSLPFGGV--------GNSGMGSYHGKKSFETFSHRRSCLV 446 (469)
T ss_dssp SEEEESCSSGGGSCTTSCBCCC--------GGGEECCBSTHHHHHHTEEEEEEEE
T ss_pred ceEEEeCCCCCCCCCCCCcCCc--------cccccCccchHHHHHHhhCeeEEEE
Confidence 99999976421 33333 1346678888888889988777654
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=94.53 E-value=5.3 Score=41.67 Aligned_cols=326 Identities=19% Similarity=0.121 Sum_probs=175.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc-e
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET-S 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~-~ 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-..-.. .
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~ev~~~~~~l~~~a~~~~~~~~~~ 131 (506)
T 3rh9_A 69 PIETRRKWLEDIRDGLKENREEIGRILCMEHGKPW-----------------KEAQGEVDYAAGFFDYCAKHISALDSHT 131 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGGCCEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 34455566777777777777766655555554311 11222355666667666543221100 1
Q ss_pred EEecCceEEEEEE-EecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCch-
Q 013679 103 VENMKGVRCKRVA-RSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVTH- 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r~-~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~e- 178 (438)
....+|...-.++ .|+.-|++..|- -|| ...+.-++||-.||+.=|+= |.. .-......| .....+|+..
T Consensus 132 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~g 205 (506)
T 3rh9_A 132 IPEKPKDCTWTVHYRPVGVTGLIVPW---NFPIGMIAKKLSAALAAGCPSVIK--PAS-ETPLTMIAFFSVMDKLDLPDG 205 (506)
T ss_dssp CSCCGGGCEEEEEEEECCSEEEECCS---SSTTHHHHHHHHHHHHHTCCEEEE--CCT-TSCHHHHHHHHHHTTTTCCTT
T ss_pred cccCCCceeeEeecccceEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--cCC-ccHHHHHHHHHHHHHhCcChh
Confidence 1111344444555 999999999994 355 34446688999999865543 431 111111122 2344455542
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH---HHHhcCCCCcccccCCCCCceEEEEecCCCC
Q 013679 179 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA---KMILQNSEAMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 179 Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~A---K~~v~~~~~~VgID~~AGPSEvlIiAD~~An 246 (438)
++. -| |...-.+|.- -|.||+|.==|..=| ++| |++... +-|-+= +|-|++||
T Consensus 206 vv~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lE---------lGGk~p--~iV~~dAD 270 (506)
T 3rh9_A 206 MVNLVMGKASVIGKVLCE----HKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALE---------LGGNAP--FIVFDDAD 270 (506)
T ss_dssp SEEECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEE---------CCCCCE--EEECTTSC
T ss_pred hEEEEeCCChHHHHHHHh----CCCCCEEEEECCHHHHHHHHHHhhhcCCceEEe---------cCCCCc--eEECCCCC
Confidence 322 24 6655556653 578999975555432 111 221111 123333 44456789
Q ss_pred HHHHHHhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHH
Q 013679 247 PVHIAADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASK 299 (438)
Q Consensus 247 p~~vAaDLLaQAEH----d~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~ 299 (438)
.+..|-.++.-+=. --.|. -+||-.+ .. +++.+.+.+.++.+. . .+.++.
T Consensus 271 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~ 347 (506)
T 3rh9_A 271 LEAAADNLIANKFRGGGQTCVCANRIFVHEK--VA-DAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQD 347 (506)
T ss_dssp HHHHHHHHHHHHHGGGGCSSSSCCEEEEETT--TH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcccCcEEEEcHH--HH-HHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHH
Confidence 98877766542211 12233 3444333 43 666666665555541 0 011111
Q ss_pred hh--------------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH-
Q 013679 300 AL--------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE- 335 (438)
Q Consensus 300 sl--------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~- 335 (438)
+. + .| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 348 a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 427 (506)
T 3rh9_A 348 ALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAER 427 (506)
T ss_dssp HHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHH
T ss_pred HHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 11 1 12 2455789999999999854333 567788874
Q ss_pred --HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEEeCHHHHH
Q 013679 336 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQSLTEEGLK 400 (438)
Q Consensus 336 --~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~~s~~~~~ 400 (438)
.+..++ .+|.|++..++.. +..+|-+ |..|+.|..+++.|+..-++..-....+.
T Consensus 428 a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~~~~~ 489 (506)
T 3rh9_A 428 AQRVAAGL-RFGHVGWNTGTGP---------TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAENLY 489 (506)
T ss_dssp HHHHHHHC-CCSEEEESCCCCC---------CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC------
T ss_pred HHHHHHhC-CcceEEEcCCCCC---------CCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCcccee
Confidence 566777 4899999986541 1235655 45677777889999887776644444433
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=94.41 E-value=3.6 Score=46.96 Aligned_cols=261 Identities=16% Similarity=0.169 Sum_probs=146.6
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-h
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-I 179 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e-I 179 (438)
.+|...-.+++|+.-|++..|- -|| ...+..+.||-.||+. ||+=|.. -.|. +....+.+|+.. +
T Consensus 655 ~~g~~~~~~~~PlGVV~~I~Pw---NfPl~i~~~~~a~ALaaGNt--VVlKPse----~tplsa~~l~ell~eAGlP~gv 725 (1026)
T 4f9i_A 655 APGELNHYFYEPKGVAAVIAPW---NFPLAISMGMASAAIVTGNC--VVFKPSG----ITSIIGWHLVELFREAGLPEGV 725 (1026)
T ss_dssp CTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEEECCG----GGHHHHHHHHHHHHHTTCCTTS
T ss_pred CCCccceeEeecCceEEEeCCC---ccHHHHHHHHHHHHHHcCCE--EEEEcCc----cchHHHHHHHHHHHHhCcCCCe
Confidence 4577777889999999999994 354 4445667899999965 4444542 2332 233556677653 3
Q ss_pred hh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC--CCC-----cc-cccCCCCCceEEEEecCCCCHH
Q 013679 180 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--SEA-----MI-SIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 180 y~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~--~~~-----~V-gID~~AGPSEvlIiAD~~Anp~ 248 (438)
+. -| |...-.+|. +-|.||+|.==|..=|. |++... ... .. -+==+-|-+ -+|.|++||++
T Consensus 726 vnvV~G~g~~vg~~L~----~hp~v~~V~FTGSt~vg--~~I~~~aa~~~~~~~~lkpv~lElGGkn--p~IV~~dADld 797 (1026)
T 4f9i_A 726 FNFTPGRGSVMGDYLV----DHPDISLIAFTGSMETG--LRIIERAAKVHPGQANVKKIISEMGGKN--AIIIDDDADLD 797 (1026)
T ss_dssp EEECCCCHHHHHHHHH----HCTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEEEEECCCCE--EEEECTTCCHH
T ss_pred EEEEecCcHHHHHHHH----hCCCCCEEEeCCCHHHH--HHHHHHhhcccccccCccceEEecCCCC--eEEECCCCCHH
Confidence 32 24 554444554 25889999666654332 221110 000 00 000011222 35668889999
Q ss_pred HHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHh--
Q 013679 249 HIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKA-- 300 (438)
Q Consensus 249 ~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~s-- 300 (438)
.++.+++.-+=. --.|...|+.. +++. +++.+.+.+.++.+. . ...++.+
T Consensus 798 ~Aa~~iv~saf~~aGQ~C~A~~rl~V~-~~i~-d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~ 875 (1026)
T 4f9i_A 798 EAVPHVLYSAFGFQGQKCSACSRVIVL-DAVY-DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKR 875 (1026)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEE-GGGH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCceEEec-HHHH-HHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHh
Confidence 999888754322 12344444443 3354 777777776666552 0 0111111
Q ss_pred --------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHH
Q 013679 301 --------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 338 (438)
Q Consensus 301 --------------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l 338 (438)
+. .| .|+.++|+|||++++|..--=| ..|.++|.. .+.
T Consensus 876 ~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~ 955 (1026)
T 4f9i_A 876 EGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955 (1026)
T ss_dssp HSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH
T ss_pred CCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH
Confidence 11 12 2455789999999999853222 457777864 456
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCCC-----Ccccc-ccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARM-YGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~-~sgLsv~~FlK~~s~~~ 393 (438)
.+++ +|.|++...+.-+. ...+|=+ |+.+. -|..++..|+..-++..
T Consensus 956 ~~l~-aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~ 1008 (1026)
T 4f9i_A 956 REFR-VGNLYINRNNTGAL-------VERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTE 1008 (1026)
T ss_dssp HHSC-CSEEEESSCSCCCC-------TTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEE
T ss_pred HhCC-EeeEEEcCCCCCCC-------CCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEE
Confidence 6665 99999998654322 1234444 44433 34456788887766543
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.19 E-value=5.8 Score=40.77 Aligned_cols=318 Identities=22% Similarity=0.217 Sum_probs=156.9
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEEe
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVEN 105 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~ 105 (438)
.+-.+..+.+-+.++++.|+=..-.++...+.. ......-+..+++.++.|.+.-..-.....
T Consensus 67 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----------------~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~- 129 (478)
T 3ty7_A 67 KERQALLDKIVKEYENRKDDIVQAITDELGAPL----------------SLSERVHYQMGLNHFVAARDALDNYEFEER- 129 (478)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----------------HHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----------------HHHhHHHHHHHHHHHHHHHHHHHHhhcccC-
Confidence 344455566666666666655544555444310 111122245556666655432211111111
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCch-hhhc--
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-ILKA-- 182 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~e-Iy~v-- 182 (438)
++ ..-.++.|+.-|++..|- .+|+ ...+.-.+||-.||+.=|+=.+|-.+ ..+-.+....+.+|+.+ ++.+
T Consensus 130 -~~-~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVlKps~~tp--~t~~~l~~~~~~aGlP~gvv~vv~ 203 (478)
T 3ty7_A 130 -RG-DDLVVKEAIGVSGLITPW-NFPT-NQTSLKLAAAFAAGSPVVLKPSEETP--FAAVILAEIFDKVGVPKGVFNLVN 203 (478)
T ss_dssp -ET-TEEEEEEECCCEEEECCS-SSTT-HHHHHHHHHHHHHTCCEEEECCTTSC--HHHHHHHHHHHHHTCCTTTEEECC
T ss_pred -Cc-cceEEecCceEEEEECCC-cchH-HHHHHHHHHHHHcCCeEEEECCCcch--HHHHHHHHHHHHhCcCcCeEEEEE
Confidence 12 234568899999999995 3333 23445678999999876654333111 01112223445566542 2211
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
| |...-.+|. .-|+||+|.=-|..=| ++|+.+- .|-.. +-|-+= +|-|++||.+..|..++
T Consensus 204 g~~~~~~~~L~----~~~~v~~v~fTGS~~~G~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~Aa~~i~ 271 (478)
T 3ty7_A 204 GDGAGVGNPLS----EHPKVRMMSFTGSGPTGSKIMEKAAKDFK-----KVSLE-LGGKSP--YIVLDDVDIKEAAKATT 271 (478)
T ss_dssp CCTTTTHHHHH----HCTTCCEEEECSCHHHHCC--CSTTTTTC-----EEECC-CCCCCE--EEECTTSCHHHHHHHHH
T ss_pred CCChHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ceEEe-cCCCCC--cccCCCCCHHHHHHHHH
Confidence 2 333333333 2488999875554322 1121110 01111 113333 44566799998877755
Q ss_pred hccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc------
Q 013679 256 SQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG------ 302 (438)
Q Consensus 256 aQAEH----d~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~------ 302 (438)
.-+=. --.+. -+||-.+ .. +++.+.+.+.++.+.- .+.+..+.+
T Consensus 272 ~~~~~~~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~ 348 (478)
T 3ty7_A 272 GKVVNNTGQVCTAGTRVLVPNK--IK-DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELF 348 (478)
T ss_dssp HHHHGGGGCCTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHhCCCCccCCCeEEEcHH--HH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 32211 22333 3444433 33 6666666666654410 011111110
Q ss_pred -----------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhh
Q 013679 303 -----------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESI 340 (438)
Q Consensus 303 -----------------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~ 340 (438)
.| .++.++|+|||++++|..--=| ..|.++|.. .+..+
T Consensus 349 ~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~ 428 (478)
T 3ty7_A 349 YGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARS 428 (478)
T ss_dssp ECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHH
T ss_pred ecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 12 2355789999999999854333 567788875 46666
Q ss_pred cccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 341 IENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 341 i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+ .+|.|++.. ++ .++-+|- +|..|..|..+++.|++.-++.
T Consensus 429 l-~~G~v~vN~-~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 429 I-EAGTVEINE-AG---------RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp S-CSSEEEETT-CC-------------------------------CCGGGEEEEEEE
T ss_pred C-CcCeEEECC-CC---------CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 6 489999997 22 1223454 4567888888999999887765
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=94.05 E-value=6.5 Score=40.80 Aligned_cols=322 Identities=17% Similarity=0.163 Sum_probs=173.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--C
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--E 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~--~ 100 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+- + .+....-+..+++.++.|.+. ..+ .
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~------------~ea~~~Ev~~~~~~~~~~a~~-~~~~~g 129 (495)
T 3b4w_A 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP----P------------TIIETMHWMGSMGAMNYFAGA-ADKVTW 129 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H------------HHHHHTTTHHHHHHHHHHHTC-GGGSCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----H------------HHHHHHHHHHHHHHHHHHHHH-HHHhcC
Confidence 33445556677777777777776555555555321 0 001101144455666655432 211 1
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH 178 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e 178 (438)
-.+....+...-.++.|+.-|++..|-- ||-. .+...+||-.||+.=|+= |.. .-..... +......+|...
T Consensus 130 ~~~~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~ 203 (495)
T 3b4w_A 130 TETRTGSYGQSIVSREPVGVVGAIVAWN---VPLFLAVNKIAPALLAGCTIVLK--PAA-ETPLTANALAEVFAEVGLPE 203 (495)
T ss_dssp EEEEEETTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEEE--CBT-TSCHHHHHHHHHHHHTTCCT
T ss_pred CcccCCCCceEEEEEccCceEEEECCCc---chHHHHHHHHHHHHHcCCEEEEe--cCC-ccHHHHHHHHHHHHHhCCCc
Confidence 1112223545667889999999999953 6643 345778999999865544 431 1111222 223455666642
Q ss_pred -hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 -Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. -||...-.+|. .-|+||+|.==|..=| ++|+.+. . |-.. +-|-+= +|-|++||.+.
T Consensus 204 gvv~vv~g~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-p----v~lE-LGGk~p--~iV~~dADl~~ 271 (495)
T 3b4w_A 204 GVLSVVPGGIETGQALT----SNPDIDMFTFTGSSAVGREVGRRAAEMLK-P----CTLE-LGGKSA--AIILEDVDLAA 271 (495)
T ss_dssp TSEEECCBSHHHHHHHT----TCTTCCEEEEESCHHHHHHHHHHHHHTTC-C----EEEE-CCCCEE--EEECTTCCHHH
T ss_pred CeEEEEeCCHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-c----eeec-CCCcce--EEECCCCCHHH
Confidence 332 25666666665 3589999973333222 2332211 0 1111 124443 44456789988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh--
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL-- 301 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl-- 301 (438)
.|-.++.-+ =.--.+...++.... .. +++.+.+.+.++.+.- .+.++.+.
T Consensus 272 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 349 (495)
T 3b4w_A 272 AIPMMVFSGVMNAGQGCVNQTRILAPRS-RY-DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEE 349 (495)
T ss_dssp HHHHHHHHHHGGGGCCTTCEEEEEEEGG-GH-HHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCCCCCCeEEEEccc-HH-HHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhC
Confidence 777665422 112234444443332 32 5565555555544310 01111111
Q ss_pred -------------------------------------c-CC---eEEEeCCHHHHHHHhhhhccc-cceecccChH---H
Q 013679 302 -------------------------------------G-HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---K 336 (438)
Q Consensus 302 -------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~ 336 (438)
+ .| .++.++|+|||++++|..--= -..|.++|.. .
T Consensus 350 Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 429 (495)
T 3b4w_A 350 GARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIK 429 (495)
T ss_dssp TCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHH
T ss_pred CCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHH
Confidence 0 12 234578999999999985322 2667788864 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++.++ .+|.|++..++ . +.-+|- +|..|..|..+++.|+..-++.
T Consensus 430 ~~~~l-~aG~V~iN~~~--~--------~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~ 479 (495)
T 3b4w_A 430 ISQQI-RTGTYGINWYA--F--------DPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479 (495)
T ss_dssp HHHHS-CCSCCEESSCC--C--------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHhC-CEeEEEECCCC--C--------CCCCCCCCCCCCCcCccchHHHHHHhcceeEEE
Confidence 66676 59999999753 1 122444 4566777777888998777764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=94.03 E-value=7 Score=41.10 Aligned_cols=325 Identities=15% Similarity=0.104 Sum_probs=177.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCC
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAE 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~--q~~~~ 100 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+. .....
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~l~~~a~~~~~~~~~ 155 (538)
T 3qan_A 93 VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPW-----------------KEADADTAEAIDFLEYYARQMIELNRG 155 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 334455566677777777777765555555444210 11111255555666655443 11111
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH----HHHHHHcC
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV----LYCAKKAG 175 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i----L~AA~l~G 175 (438)
......+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=|+ -|.. ..|.+ ......+|
T Consensus 156 ~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVl--Kps~----~tp~ta~~l~~l~~eaG 226 (538)
T 3qan_A 156 KEILSRPGEQNRYFYTPMGVTVTISPW---NFALAIMVGTAVAPIVTGNTVVL--KPAS----TTPVVAAKFVEVLEDAG 226 (538)
T ss_dssp BCCCCCTTEEEEEEEEECCEEEEECCS---TTTTHHHHHHHHHHHHTTCEEEE--ECCT----TSHHHHHHHHHHHHHTT
T ss_pred eeecccCCcceeeecCCCcEEEEECCC---chHHHHHHHHHHHHHHcCCEEEE--ECCC----ccHHHHHHHHHHHHHhC
Confidence 111222466777889999999999995 355 4566778899999975444 3432 34432 22445566
Q ss_pred Cch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHh---cCCC-----C-cccccCCCCCceEEEEec
Q 013679 176 VTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSE-----A-MISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 176 v~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v---~~~~-----~-~VgID~~AGPSEvlIiAD 242 (438)
+.. ++.+ | |...-.+|. .-|+||+|.=-|..=|- |++. +..+ . .| +=-+-|-+= +|-|
T Consensus 227 lP~gvv~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G--~~i~~~aa~~~~~~~~lkpv-~lELGGk~p--~IV~ 297 (538)
T 3qan_A 227 LPKGVINYVPGSGAEVGDYLV----DHPKTSLITFTGSKDVG--VRLYERAAVVRPGQNHLKRV-IVEMGGKDT--VVVD 297 (538)
T ss_dssp CCTTSEEECCBCTTTTHHHHH----HCTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEE-EEECCCCCE--EEEC
T ss_pred CCCCeEEEEecCCHHHHHHHH----hCCCcCEEEEECCHHHH--HHHHHHhhhccccccccccE-EEecCCCCc--eEEC
Confidence 542 2221 3 443333443 24889999855553221 1111 1000 0 01 011223333 3445
Q ss_pred CCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHH
Q 013679 243 IYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEF 296 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~i 296 (438)
++||.+.+|-.++.-+=. --.+...++... +.. +++.+.+.+.++.+. . .+.
T Consensus 298 ~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~ 375 (538)
T 3qan_A 298 RDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK-DVY-DEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSY 375 (538)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEET-TTH-HHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCccCceeEEeh-HHH-HHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHH
Confidence 678999877776643221 223333333333 243 777777777766552 0 112
Q ss_pred HHHhh------------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH
Q 013679 297 ASKAL------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE 335 (438)
Q Consensus 297 a~~sl------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~ 335 (438)
++.+. + .| .|+-++|+|||++++|..--=| ..|.++|..
T Consensus 376 i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 455 (538)
T 3qan_A 376 IEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455 (538)
T ss_dssp HHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHH
Confidence 22221 1 13 2455789999999999853222 567788865
Q ss_pred ---HHHhhcccccccccC-CCCcccccccccCCCCCCCC-----CCcc-ccccCcccccccceeeEEE
Q 013679 336 ---KWESIIENAGSVFLG-EWTPESVGDYASGTNHVLPT-----YGYA-RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 ---~~l~~i~nAGaiFlG-~~sp~a~GDY~aGpNHvLPT-----~G~A-R~~sgLsv~~FlK~~s~~~ 393 (438)
.+..++ .+|.|++. .++.. .+.-+|= +|.. |+.|..+++.|+..-++..
T Consensus 456 ~a~~~~~~l-~aG~V~iN~~~~~~--------~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~ 514 (538)
T 3qan_A 456 HIEQAKREF-HVGNLYFNRNCTGA--------IVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSE 514 (538)
T ss_dssp HHHHHHHHC-CCSEEEESSCSCCC--------CTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEE
T ss_pred HHHHHHHhC-CeeEEEEeCCCCCC--------CCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEE
Confidence 466666 59999999 43321 1334554 4556 8888889999998877654
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=93.88 E-value=7.2 Score=40.66 Aligned_cols=324 Identities=15% Similarity=0.131 Sum_probs=172.8
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCC
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAE 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q--~~~~ 100 (438)
....+-.+..+.+.+.++++.|+=..-.++..-+. +. +.+.-+..+++.++.|.+.- ....
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~~~ 155 (516)
T 1uzb_A 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKN----------------WV-EASADVAEAIDFIEYYARAALRYRYP 155 (516)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHHGGGCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33445566677777777777776555555555321 01 11122555666666554321 1111
Q ss_pred c-eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHc
Q 013679 101 T-SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKA 174 (438)
Q Consensus 101 ~-~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~ 174 (438)
. .....+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=| +=|.. ..|. +....+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~----~tp~ta~~l~~l~~ea 226 (516)
T 1uzb_A 156 AVEVVPYPGEDNESFYVPLGAGVVIAPW---NFPVAIFTGMIVGPVAVGNTVI--AKPAE----DAVVVGAKVFEIFHEA 226 (516)
T ss_dssp CCCCCCCTTEEEEEEEEECCEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEEEeccceEEEECCC---ccHHHHHHHHHHHHHHcCCeEE--EeCCC----CCHHHHHHHHHHHHHh
Confidence 1 11123566667789999999999995 366 555667889999998643 44431 3332 22345566
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC--------CCC-cccccCCCCCceEEEEe
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--------SEA-MISIDMPAGPSEVLVIA 241 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~--------~~~-~VgID~~AGPSEvlIiA 241 (438)
|... ++. .| |...-.+|. +-|.||+|.==|..=| .|++... .+. .|-. -+-|-+= +|-
T Consensus 227 GlP~gvv~vv~g~~~~~~~~L~----~~~~v~~I~FTGS~~~--G~~i~~~aa~~~~~~~~~~~v~l-ElGGk~p--~iV 297 (516)
T 1uzb_A 227 GFPPGVVNFLPGVGEEVGAYLV----EHPRIRFINFTGSLEV--GLKIYEAAGRLAPGQTWFKRAYV-ETGGKNA--IIV 297 (516)
T ss_dssp TCCTTSEEECCCSSSHHHHHHH----TCTTCCEEEEESCHHH--HHHHHHHHTSCCTTCCSCCEEEE-ECCCCEE--EEE
T ss_pred CCCcCeEEEEeCCCchhhhhhh----cCCCcCEEEecCCHHH--HHHHHHHhhhccccccccceeEE-ecCCccc--eeE
Confidence 6542 222 24 554444554 2488999985555322 2222110 000 0111 1224443 444
Q ss_pred cCCCCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHH
Q 013679 242 DIYASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEF 296 (438)
Q Consensus 242 D~~Anp~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------------------~~i 296 (438)
|++||.+..|-.++.-+ =.--.|...++... +.. +++.+.+.+.++.+.- .+.
T Consensus 298 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~ 375 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ-GAY-EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSY 375 (516)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEch-HHH-HHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHH
Confidence 66789988777665322 11223444444333 343 6666666666654420 011
Q ss_pred HHHh----------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccCh
Q 013679 297 ASKA----------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDA 334 (438)
Q Consensus 297 a~~s----------------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p 334 (438)
++.+ +. .| .|+.++|+|||++++|.. +-. ..|.++|.
T Consensus 376 i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~-~~gL~a~v~t~d~ 454 (516)
T 1uzb_A 376 IEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT-PYGLTGGVYSRKR 454 (516)
T ss_dssp HHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSCH
T ss_pred HHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCceEEEECCCH
Confidence 1111 10 12 345578999999999997 333 56778887
Q ss_pred HH---HHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCc-ccccccceeeEE
Q 013679 335 EK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGV-SLDSFLKYMTVQ 392 (438)
Q Consensus 335 ~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgL-sv~~FlK~~s~~ 392 (438)
.. +..++ ++|.|++..++... .++-+|= +|..|+.+|. +++.|+..-++.
T Consensus 455 ~~a~~~~~~l-~aG~v~iN~~~~~~-------~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 455 EHLEWARREF-HVGNLYFNRKITGA-------LVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHHHHS-CCSEEEESSCSCCC-------CTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhC-CEeEEEEeCCCCCC-------CCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 54 55666 79999999743221 1223454 4555444443 356777766653
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=93.79 E-value=7.3 Score=40.48 Aligned_cols=261 Identities=15% Similarity=0.135 Sum_probs=138.1
Q ss_pred EEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHH-------HHcCCc-hhh
Q 013679 111 CKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCA-------KKAGVT-HIL 180 (438)
Q Consensus 111 ~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA-------~l~Gv~-eIy 180 (438)
.-.++.|+.-|++..|- .+|+--+ +....+||-.||+.=|+= |.. ..|.+- .-+ ..+|+. .++
T Consensus 130 ~~~~~~P~GVv~~I~Pw-N~P~~~~~~~~~~~~ALaaGN~VVlK--ps~----~tp~t~~~l~~l~~~al~~aGlP~gvv 202 (510)
T 1ez0_A 130 IRRQQIALGPVAVFGAS-NFPLAFSAAGGDTASALAAGCPVIVK--GHT----AHPGTSQIVAECIEQALKQEQLPQAIF 202 (510)
T ss_dssp EEEEEEECSCEEEECCS-SCTTTTSTTSHHHHHHHHHTCCEEEE--CCT----TCHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ceEEEecCcEEEEECCc-cchhhhhhhHHHHHHHHHcCCEEEEE--CCC----CchHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 34678999999999995 3444333 246789999999875543 431 344321 112 335764 333
Q ss_pred hc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH--H
Q 013679 181 KA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV--H 249 (438)
Q Consensus 181 ~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~--~ 249 (438)
.+ | |...-.+|.= -|.||+|.==|..-| ++|+++-.. .|-.. +-|-+=++| |++||.+ .
T Consensus 203 ~vv~g~~~~~g~~L~~----~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~---pv~lE-LGGk~p~iV--~~dADl~~~~ 272 (510)
T 1ez0_A 203 TLLQGNQRALGQALVS----HPEIKAVGFTGSVGGGRALFNLAHERPEPI---PFYGE-LGAINPTFI--FPSAMRAKAD 272 (510)
T ss_dssp EEECCSCTHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CEEEE-CCCCCEEEE--CHHHHHHCTT
T ss_pred EEEeCCcHHHHHHHHc----CCCCCEEEEeCcHHHHHHHHHHhhccCCCc---cEEEE-CCCCCeEEE--eCCCCccHHH
Confidence 32 4 5554445542 478999983333222 233222000 01111 235554444 4447777 5
Q ss_pred HHHhhhhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCC-----C-------HHHHHHhhc----------
Q 013679 250 IAADLLSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLP-----R-------GEFASKALG---------- 302 (438)
Q Consensus 250 vAaDLLaQAEH----d~~a~~-vLvt~s~~la~~~V~~ei~~ql~~l~-----r-------~~ia~~sl~---------- 302 (438)
.|-.++.-+=. --.|.. +||-.+ ... ++..+.+.+.++.+. . .+.++.+++
T Consensus 273 aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-~i~-d~f~~~l~~~~~~~~~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg 350 (510)
T 1ez0_A 273 LADQFVASMTMGCGQFCTKPGVVFALNT-PET-QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQ 350 (510)
T ss_dssp HHHHHHHHHTGGGGCCTTCCCEEEEESS-HHH-HHHHHHHHHHHHHCCCBCCSSHHHHHHHHHHHHHHHTSTTEEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCCCCEEEEeCC-ccH-HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 55554432222 223333 444443 232 555555555554432 0 011222221
Q ss_pred ----------------------------CC---eEEEeCCHHHHHHHhhhhccccc--eecccCh-----HHHHhhcc-c
Q 013679 303 ----------------------------HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDA-----EKWESIIE-N 343 (438)
Q Consensus 303 ----------------------------~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p-----~~~l~~i~-n 343 (438)
.| .++.++|+|||++++|.. +-.| .|.++|. +.++.+++ .
T Consensus 351 ~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~-~~gLaa~v~t~d~~~~~a~~~~~~l~~~ 429 (510)
T 1ez0_A 351 AESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML-AGSLTATIHATEEDYPQVSQLIPRLEEI 429 (510)
T ss_dssp CCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC-CCEEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred CCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC-CCCeEEEEEccCcCHHHHHHHHHHHhhc
Confidence 12 234478999999999996 3444 5677764 45777775 8
Q ss_pred ccccccCCCCccc-ccccccCCCCCCC--CCCcccc--ccCcccccccceeeEEEe
Q 013679 344 AGSVFLGEWTPES-VGDYASGTNHVLP--TYGYARM--YGGVSLDSFLKYMTVQSL 394 (438)
Q Consensus 344 AGaiFlG~~sp~a-~GDY~aGpNHvLP--T~G~AR~--~sgLsv~~FlK~~s~~~~ 394 (438)
+|.|++..++... +.+ +..|-.| -+|..|. .|..+++.|++..+++..
T Consensus 430 aG~V~iN~~~~~~~~~~---~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~~~ 482 (510)
T 1ez0_A 430 AGRLVFNGWPTGVEVGY---AMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQAL 482 (510)
T ss_dssp EEEEEESSCSSCCCCSS---SCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEESC
T ss_pred ccEEEECCCCccCccCC---CCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEcCC
Confidence 9999999754211 111 1222222 1233332 566789999998888865
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=93.68 E-value=7.6 Score=40.34 Aligned_cols=315 Identities=17% Similarity=0.146 Sum_probs=168.8
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 103 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~ 103 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. +.+....-+..+++.++.|.+.- .+ |.-
T Consensus 80 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~Ev~~~~~~~~~~a~~~-~~-~~g 141 (495)
T 1wnd_A 80 TPKVRAECLLKLADVIEENGQVFAELESRNCGKP----------------LHSAFNDEIPAIVDVFRFFAGAA-RC-LNG 141 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHT-TC-CEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHHH-HH-hcC
Confidence 3344455566666666666665544445444321 11111202666777777665432 21 211
Q ss_pred E----ecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHc---
Q 013679 104 E----NMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKA--- 174 (438)
Q Consensus 104 ~----~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~--- 174 (438)
+ ..+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+. ||+=|.. ..|.+ +.-++++
T Consensus 142 ~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~ea 212 (495)
T 1wnd_A 142 LAAGEYLEGHTSMIRRDPLGVVASIAPW---NYPLMMAAWKLAPALAAGNC--VVLKPSE----ITPLTALKLAELAKDI 212 (495)
T ss_dssp ECBEEEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT----TCCHHHHHHHHHHTTT
T ss_pred ccccCCCCCceeEEeeecCCeEEEECCC---cchHHHHHHHHHHHHHcCCe--eEeeCCC----CChHHHHHHHHHHHHh
Confidence 1 12465666789999999999995 467 4455678999999986 3344442 23322 1222222
Q ss_pred ---CCchhhhcc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCC
Q 013679 175 ---GVTHILKAG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIY 244 (438)
Q Consensus 175 ---Gv~eIy~vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~ 244 (438)
|+=.|.. | |...-.+|. .-|.||+|.==|..-|- +|+++. .|-.. +-|-+=+ |-|++
T Consensus 213 lP~gvv~vv~-g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~l~-----~v~lE-LGGk~p~--iV~~d 279 (495)
T 1wnd_A 213 FPAGVVNILF-GRGKTVGDPLT----GHPKVRMVSLTGSIATGEHIISHTASSIK-----RTHME-LGGKAPV--IVFDD 279 (495)
T ss_dssp SCTTSEEECC-CCTTTTHHHHH----TCTTEEEEEEESCHHHHHHHHHHHGGGTC-----EEEEE-CCCCCEE--EECTT
T ss_pred CCcCeEEEEe-CCCHHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ccccc-cCCCCeE--EECCc
Confidence 2222222 4 554444454 25889999544443222 121111 01111 2344433 44566
Q ss_pred CCHHHHHHhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHH
Q 013679 245 ASPVHIAADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFA 297 (438)
Q Consensus 245 Anp~~vAaDLLaQAEH----d~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia 297 (438)
||.+..|-.++.-+=. .-.+. -+||-.+ .. +++.+.+.+.++.+.- .+.+
T Consensus 280 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i 356 (495)
T 1wnd_A 280 ADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKG--IY-DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAV 356 (495)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEecch--hH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHH
Confidence 8988877766542211 12233 3444433 32 5666666555554410 0111
Q ss_pred HHhh--------------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc--ceecccC
Q 013679 298 SKAL--------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKD 333 (438)
Q Consensus 298 ~~sl--------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~ 333 (438)
+.+. + .| .|+-++|+|||++++|.. +-. ..|.++|
T Consensus 357 ~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d 435 (495)
T 1wnd_A 357 EEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS-QYGLASSVWTKD 435 (495)
T ss_dssp HHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS-SCCSEEEEECSB
T ss_pred HHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCeeEEEECCC
Confidence 1111 0 12 234578999999999986 332 5677888
Q ss_pred hH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 334 AE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 334 p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.. .+..+++ +|.|++..+... +.-+|- +|..|..|..+++.|+..-++.
T Consensus 436 ~~~a~~~~~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 436 VGRAHRVSARLQ-YGCTWVNTHFML---------VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHHCC-SSEEEESCCCCC---------CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhCC-cceEEECCCCCC---------CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 64 4566664 899999975431 123454 4556776777788888777664
|
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=90.71 E-value=17 Score=37.67 Aligned_cols=317 Identities=17% Similarity=0.137 Sum_probs=171.5
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~~~~ 104 (438)
.+-.+..+++-+.++++.|+=..-.++..-+. +. +...+-+..+++.++.|...-.. ......
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~------------ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~ 129 (490)
T 2wme_A 66 MQRSRILRRAVDILRERNDELAALETLDTGKP----LA------------ETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HH------------HHTTTHHHHHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HH------------HHHHHHHHHHHHHHHHHHhccccccCcccc
Confidence 33345566666666666665444444433211 10 00011245556666666543221 122333
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH- 178 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e- 178 (438)
..++...-.++.|+.-|++..| .-||-.+ +.-.+||-.||+.= |+=|.. ..|. +....+.+|+.+
T Consensus 130 ~~~~~~~~~~~~P~GVv~~I~P---wNfP~~~~~~~~a~ALaaGNtV--VlKPse----~tp~ta~~l~~l~~eaGlP~g 200 (490)
T 2wme_A 130 LRETSFVYTRREPLGVVAGIGA---WNYPVQIALWKSAPALAAGNAM--IFKPSE----VTPLTALKLAEIYTEAGVPDG 200 (490)
T ss_dssp EETTEEEEEEEEECSEEEEECC---SSSHHHHHHHHHHHHHHTTCEE--EEECCT----TSCHHHHHHHHHHHHHTCCTT
T ss_pred ccCCcceeEEecceeEEEEecc---ccCcchhhhhhHHHHHHcCCeE--EEECCc----CCHHHHHHHHHHHHHhCCCCC
Confidence 4556667778899999999999 3566444 45577999999863 344542 2332 223445567643
Q ss_pred hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcH-----HHH-HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQ-----YVT-AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~-----yV~-~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++.+ | |.+.-.+|. .-|.||+|.==|.. -+. +|.+-+-. |-.. +-|=+= +|-|++||.+.
T Consensus 201 v~~vv~g~g~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~----v~lE-LGGk~p--~iV~~dAdl~~ 269 (490)
T 2wme_A 201 VFNVLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLKE----VTME-LGGKSP--LIIFPDADLDR 269 (490)
T ss_dssp SEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCCE----EEEE-CCCCCE--EEECTTSCHHH
T ss_pred cEEEEeCChHHHHHHHH----hCCCCCEEEEECChHHHHHHHHhhhccCCce----EEEE-cCCcCe--EEEccCccHHH
Confidence 3322 3 555444554 25889999733332 211 22221100 1000 112222 44567899998
Q ss_pred HHHhhhhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc
Q 013679 250 IAADLLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG 302 (438)
Q Consensus 250 vAaDLLaQAEHd----~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~ 302 (438)
.+..++.-+=.. -.|. -++|- ++.. +++.+.+.+.++.+.- ...++.+.+
T Consensus 270 A~~~~~~~~~~n~GQ~C~a~~rv~V~--~~i~-d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 346 (490)
T 2wme_A 270 AADIAVMANFFSSGQVCTNGTRVFIH--RSQQ-ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKA 346 (490)
T ss_dssp HHHHHHHHHHGGGGCCTTCCCEEEEE--GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCCCceeeccc--hhHH-HHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHh
Confidence 887766432211 1223 34443 3343 6677767666655420 011222211
Q ss_pred ------------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH-
Q 013679 303 ------------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE- 335 (438)
Q Consensus 303 ------------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~- 335 (438)
.| .|+.++|+|||++++|.-- +=-..|.++|..
T Consensus 347 ~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~ 426 (490)
T 2wme_A 347 QKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLAR 426 (490)
T ss_dssp TTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred cCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHH
Confidence 12 3455799999999999731 112567788874
Q ss_pred --HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 336 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 336 --~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
.+..+++ +|.|++..+... +.-+|-+ |+.|+.|.-+++.|+..-++
T Consensus 427 a~~~~~~l~-aG~v~iN~~~~~---------~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v 479 (490)
T 2wme_A 427 AHRAIHRLE-AGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHSC-CSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHCC-eeEEEEeCCCCC---------CCCCCcccccccccCchhHHHHHHHhhceeEE
Confidence 5677775 899999854321 1236765 46788888889999877664
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=90.47 E-value=18 Score=37.50 Aligned_cols=320 Identities=15% Similarity=0.098 Sum_probs=171.8
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~ 104 (438)
.+-.+..+.+.+.++++.|+=..-.++..-+- +. +.+.-+..+++.++.|.+.-.+- .-.+.
T Consensus 77 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~ 139 (501)
T 1uxt_A 77 TERLAVLRKAADIIERNLDVFAEVLVMNAGKP----------------KS-AAVGEVKAAVDRLRLAELDLKKIGGDYIP 139 (501)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHTGGGGGGGTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 34445566666666666665544445444221 11 11122666777777665432211 11122
Q ss_pred e---cC--ceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch
Q 013679 105 N---MK--GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH 178 (438)
Q Consensus 105 ~---~~--Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e 178 (438)
. .+ +...-.++.|+.-|++..|- .+|+ ...+...+||-.||+.=|+= |.. .-.... .+....+.+|...
T Consensus 140 ~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~ 214 (501)
T 1uxt_A 140 GDWTYDTLETEGLVRREPLGVVAAITPF-NYPL-FDAVNKITYSFIYGNAVVVK--PSI-SDPLPAAMAVKALLDAGFPP 214 (501)
T ss_dssp STTSSTTTTEEEEEEEEECSEEEEECCT-TSTT-HHHHHHHHHHHHTTCEEEEE--CCT-TSCHHHHHHHHHHHHTTCCT
T ss_pred ccccCCCcCceEEEEEeeccEEEEECCC-ccHH-HHHHHHHHHHHHcCCEEEEe--CCC-CchHHHHHHHHHHHHhCCCc
Confidence 2 22 44566788999999999995 3333 55567788999999865443 432 111122 2333455676642
Q ss_pred -hhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 179 -ILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 179 -Iy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
++.+ |+...-.+|. .-|+||+|.==|..=| .+| |++.. . +-|-| -+|-|++||.+
T Consensus 215 gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~G~~i~~~aal~~v~l--------E-LGGk~--p~iV~~dADl~ 279 (501)
T 1uxt_A 215 DAIALLNLPGKEAEKIV----ADDRVAAVSFTGSTEVGERVVKVGGVKQYVM--------E-LGGGD--PAIVLEDADLD 279 (501)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHCSSEEEE--------E-CCCCE--EEEECTTSCHH
T ss_pred CeEEEEeCCcHHHHHHH----hCCCcCEEEEeCcHHHHHHHHHhcCCCeEEE--------E-cCCcC--eEEECCCCCHH
Confidence 3322 4333333443 3489999944443211 111 22221 1 22444 34555678998
Q ss_pred HHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh--
Q 013679 249 HIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA-- 300 (438)
Q Consensus 249 ~vAaDLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s-- 300 (438)
..|-.++.-+= .--.|...++... +.. ++..+.+.+.++.+.- .+.++.+
T Consensus 280 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 357 (501)
T 1uxt_A 280 LAADKIARGIYSYAGQRCDAIKLVLAER-PVY-GKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVE 357 (501)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEEH-HHH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCcCCcEEEecc-chH-HHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 87776654321 1223333333332 243 5555555555544320 0011111
Q ss_pred ----------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---H
Q 013679 301 ----------------------------------L--G-HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 336 (438)
Q Consensus 301 ----------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~ 336 (438)
+ + .| .++-++|+|||++++|..- +--..|.++|.. .
T Consensus 358 ~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 437 (501)
T 1uxt_A 358 KGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRR 437 (501)
T ss_dssp TTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHH
T ss_pred CCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHH
Confidence 1 1 12 3455788999999999852 123567788875 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+..++ .+|.|++..+. .. .+.-+| .+|..|..|..+++.|+..-++..
T Consensus 438 ~~~~l-~~G~V~iN~~~-~~-------~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 490 (501)
T 1uxt_A 438 AVRLL-EVGAIYINDMP-RH-------GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490 (501)
T ss_dssp HHHHC-CSSEEEETSCC-CC-------TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEE
T ss_pred HHHhC-CEeeEEEeCCC-CC-------CCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEE
Confidence 55665 58999999752 11 122244 456778888888999998888754
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=88.64 E-value=24 Score=36.25 Aligned_cols=321 Identities=14% Similarity=0.081 Sum_probs=173.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~ 104 (438)
.+-.+..+.+.+.++++.|+=..-.++..-+. + .+.+.-+..+++.++.|.+.-..- .-...
T Consensus 62 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~ 124 (475)
T 1euh_A 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKG----------------Y-KSAVSEVVRTAEIINYAAEEGLRMEGEVLE 124 (475)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------H-HHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 34445566666666666665444444444211 0 112233666777777665432210 11111
Q ss_pred e-cCc----eEE-EEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHc
Q 013679 105 N-MKG----VRC-KRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKA 174 (438)
Q Consensus 105 ~-~~G----v~~-g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~ 174 (438)
. .+| ... -.++.|+.-|++..|- .+|+ ...+...+||-.||+.=|+= |.. ..|. +....+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~vVlK--ps~----~tp~t~~~l~~ll~~a 196 (475)
T 1euh_A 125 GGSFEAASKKKIAVVRREPVGLVLAISPF-NYPV-NLAGSKIAPALIAGNVIAFK--PPT----QGSISGLLLAEAFAEA 196 (475)
T ss_dssp GGGTCGGGTTEEEEEEEEECSEEEEECCT-TSTT-HHHHHHHHHHHHTTCEEEEE--CCS----TTHHHHHHHHHHHHHH
T ss_pred CCCCCccccceeeEEEEeccceEEEECCC-CchH-HHHHHHHHHHHHcCCEEEEe--CCC----cChHHHHHHHHHHHHh
Confidence 1 245 455 6788999999999995 3442 44556889999999865543 432 2333 22344556
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCceEEEEecCCCCHHH
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~-~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
|... ++. .| |.+.-.+|. .-|+||+|.==|..-| .|++.... --.|-.. +-|-+= +|-|++||.+.
T Consensus 197 GlP~gvv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~--g~~i~~~aa~~~v~lE-lGGk~p--~iV~~dADl~~ 267 (475)
T 1euh_A 197 GLPAGVFNTITGRGSEIGDYIV----EHQAVNFINFTGSTGI--GERIGKMAGMRPIMLE-LGGKDS--AIVLEDADLEL 267 (475)
T ss_dssp TCCTTTEEECCCCHHHHHHHHH----HCTTCCEEEEESCHHH--HHHHHHHTTTSCEEEE-CCCCEE--EEECTTSCHHH
T ss_pred CCCcCeEEEEeCCcHHHHHHHH----hCCCcCEEEEECchHH--HHHHHHhcCCCcEEEE-cCCcCe--EEECCCCCHHH
Confidence 6542 222 24 454444454 2488999984444322 22221100 0002111 225553 45566799988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHHHHHhhc--
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFASKALG-- 302 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------------------~~ia~~sl~-- 302 (438)
.|-.++.-+ =..-.+...++... +.. +++.+.+.+.++.+.- .+.++.+.+
T Consensus 268 aa~~i~~~~~~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~G 345 (475)
T 1euh_A 268 TAKNIIAGAFGYSGQRCTAVKRVLVME-SVA-DELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKG 345 (475)
T ss_dssp HHHHHHHHHHGGGGCCSSSEEEEEEEH-HHH-HHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCCcCCCCcEEEEeh-hHH-HHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 777665322 22233444444333 343 6666666666655420 111222211
Q ss_pred ---------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhcc
Q 013679 303 ---------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESIIE 342 (438)
Q Consensus 303 ---------------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~i~ 342 (438)
.| .++.++|+|||++++|..-- --..|.++|.. .+..++
T Consensus 346 a~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l- 424 (475)
T 1euh_A 346 ATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQL- 424 (475)
T ss_dssp CEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHS-
T ss_pred CEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhC-
Confidence 01 23447899999999999622 22567788875 455666
Q ss_pred cccccccCC-CCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 343 NAGSVFLGE-WTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 343 nAGaiFlG~-~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++|.|++.. ++.. ++-+|- +|..|..|..+++.|+..-++.
T Consensus 425 ~~G~v~vN~~~~~~---------~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 425 EVGTVHINNKTQRG---------TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp CSSEEEESSCCCCC---------STTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred CEeeEEECCCCCCC---------CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 589999997 4431 234664 4566777777888888877764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.25 E-value=2.6 Score=43.48 Aligned_cols=282 Identities=13% Similarity=0.104 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHhc-cCCCceEEe---cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCC
Q 013679 82 FDVAYNNIYAFHLAQ-KSAETSVEN---MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 82 i~~A~~nI~~fh~~q-~~~~~~~~~---~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
+..+++.++.|.+.. ....-.... .+|...-.++.|+.-|++..|- . |+-.. +.++||-.||+. ||+=|.
T Consensus 101 v~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-n-P~n~p--~~~a~ALaaGN~--VVlKps 174 (463)
T 2h5g_A 101 LNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFES-R-PDCLP--QVAALAIASGNG--LLLKGG 174 (463)
T ss_dssp HHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESS-C-TTHHH--HHHHHHHHHTCE--EEEECC
T ss_pred HHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecC-C-cHHHH--HHHHHHHHcCCE--EEEECC
Confidence 455666677665321 111111111 2566667889999999999986 3 43322 678999999986 444454
Q ss_pred CCCCCCCHHHH----HHHHHc----CCchhhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-Ccc
Q 013679 158 SQDGSICKEVL----YCAKKA----GVTHILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMI 226 (438)
Q Consensus 158 ~~~G~i~p~iL----~AA~l~----Gv~eIy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~-~~V 226 (438)
. ..|.+- .....+ |=..++. .||...-.+|. .-|.||+|.==|.. ...|++..... -.|
T Consensus 175 ~----~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~--~~G~~i~~~aal~pv 244 (463)
T 2h5g_A 175 K----EAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCR----LDKMIDLIIPRGSS--QLVRDIQKAAKGIPV 244 (463)
T ss_dssp G----GGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-----------CCCSEEEEESCH--HHHHHHHHHCSSSCB
T ss_pred C----CcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHH----hCCCcCEEEEECCH--HHHHHHHHhcCCCCE
Confidence 2 344221 122222 2122222 13322111221 23889999433332 22233221100 001
Q ss_pred cccCCCCCceEEEEecCCCCHHHHHHhhhhccC-cC--CCCce-EEEecCc---hhhHHHHHHHHHHHHhcC--CC----
Q 013679 227 SIDMPAGPSEVLVIADIYASPVHIAADLLSQAE-HG--PDSQV-VLVIVGD---GVDLDAIEQEISKQCQSL--PR---- 293 (438)
Q Consensus 227 gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE-Hd--~~a~~-vLvt~s~---~la~~~V~~ei~~ql~~l--~r---- 293 (438)
+=-+-|-+ -+|-|++||.+..|..++.-+= ++ -.+.. +||-.+- .+. +++.+...+.=..+ ..
T Consensus 245 -~lElGGk~--p~iV~~dADl~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d~p~~-~~~i~~~~~~Ga~v~~G~~~~~ 320 (463)
T 2h5g_A 245 -MGHSEGIC--HMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLF-DQIIDMLRVEQVKIHAGPKFAS 320 (463)
T ss_dssp -CSCSCCCE--EEEECTTCCTTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTTSHHH-HHHHHHHHHTTCEEEECHHHHC
T ss_pred -EEecCCcc--eEEEcCCCCHHHHHHHHHHHhccCCCccccCcEEEEeccccchHHH-HHHHHHHHhCCCEEEeCCcccc
Confidence 11122333 3445566888877666553221 21 12223 4443332 132 44433332110000 00
Q ss_pred -HHHHHH---hhc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccc
Q 013679 294 -GEFASK---ALG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGD 359 (438)
Q Consensus 294 -~~ia~~---sl~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GD 359 (438)
...... -+. .| .|+.++|+|||++++|.+--=| ..|.++|.. .+..++ .+|.|++..++..
T Consensus 321 ~g~~~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l-~aG~V~iN~~~~~---- 395 (463)
T 2h5g_A 321 YLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHV-DSACVFWNASTRF---- 395 (463)
T ss_dssp ---------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG----
T ss_pred cCccCCCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhC-CeeEEEEeCCccC----
Confidence 000001 111 13 3456899999999999853222 678888875 466666 4899999975421
Q ss_pred cccCCCCCCCCC-----Ccc--cc--ccCcccccccceeeEEE
Q 013679 360 YASGTNHVLPTY-----GYA--RM--YGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 360 Y~aGpNHvLPT~-----G~A--R~--~sgLsv~~FlK~~s~~~ 393 (438)
+.-+|=+ |.. |+ .|..+++.|+..-++..
T Consensus 396 -----~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~ 433 (463)
T 2h5g_A 396 -----SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLR 433 (463)
T ss_dssp -----CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEE
T ss_pred -----CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEE
Confidence 1235655 666 65 67778899988887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 438 | ||||
| d1k75a_ | 431 | c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Esc | 1e-115 |
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} Length = 431 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Score = 343 bits (880), Expect = e-115
Identities = 200/430 (46%), Positives = 266/430 (61%), Gaps = 8/430 (1%)
Query: 4 YRLSELTHAEVQSLKARPRIDFS-SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKV 62
+ T + + L RP I S SI V+ I+D+V+ RGD ++++Y+ +FDK + +
Sbjct: 4 IDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTAL 63
Query: 63 VENVSELPDP--ELDAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGS 120
+ E+ L +K+A VA NI FH AQK VE GVRC++V R + S
Sbjct: 64 KVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVAS 123
Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTHIL 180
VGLY+PGG+A L ST LML+ PA IAGCK VVL +PP I Y A+ GV +
Sbjct: 124 VGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEIL----YAAQLCGVQDVF 179
Query: 181 KAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240
GGAQAI+A+A+GTES PKV+KIFGPGN +VT AK + +IDMPAGPSEVLVI
Sbjct: 180 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVI 239
Query: 241 ADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKA 300
AD A+P +A+DLLSQAEHGPDSQV+L+ + + + +Q LPR E A +A
Sbjct: 240 ADSGATPDFVASDLLSQAEHGPDSQVILLTP-AADMARRVAEAVERQLAELPRAETARQA 298
Query: 301 LGHSFMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDY 360
L S ++ +D+ + + SN Y PEHLI+ ++A + I +AGSVFLG+W+PES GDY
Sbjct: 299 LNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDY 358
Query: 361 ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKKLGPYVATMAEIEGLEAHKR 420
ASGTNHVLPTYGY + L F K MTVQ L++EG L + T+A E L AHK
Sbjct: 359 ASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKN 418
Query: 421 AVTFRLQDIE 430
AVT R+ ++
Sbjct: 419 AVTLRVNALK 428
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 438 | |||
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 97.08 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 95.28 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 95.11 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 95.03 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 94.89 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 91.94 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 91.68 | |
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 91.23 |
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.9e-163 Score=1248.85 Aligned_cols=425 Identities=47% Similarity=0.766 Sum_probs=411.5
Q ss_pred eEEEcCCCCHHHHHHHhcCCCC-CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHH
Q 013679 2 KSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAV 78 (438)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~R~~~-~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~ 78 (438)
.+++|++++.+++++++.|+.. .++++.++|++||++||++||+||++||+|||++++++|+||++||++| .+|+++
T Consensus 2 ~ii~~~~l~~~e~~~ll~R~~~~~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el 81 (431)
T d1k75a_ 2 TIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDEL 81 (431)
T ss_dssp CEEEGGGSCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHH
T ss_pred ceeehhhCCHHHHHHHcCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHH
Confidence 4789999999999999999754 4678999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 79 KEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 79 ~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
++||+.|++||++||++|++++|.+++.+|+.+||+|+||+|||||||||+||||||+||++||||||||++|||||||+
T Consensus 82 ~~AI~~A~~rI~~FH~~Q~~~~~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~ 161 (431)
T d1k75a_ 82 KQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP 161 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHhhcCCCceeeccCCceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEE
Q 013679 159 QDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVL 238 (438)
Q Consensus 159 ~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvl 238 (438)
+||.+|+||++||||+||++|||||||||||||||||||||||||||.||++|||+|++..+.|||||+|||||||
T Consensus 162 ----~~~~~l~aa~~~Gv~~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~ 237 (431)
T d1k75a_ 162 ----IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVL 237 (431)
T ss_dssp ----CCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEE
T ss_pred ----CcchHHHHHHHcCccceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccccCCceEE
Confidence 8999999999999999999999999999999999999999999999999999999886533349999999999999
Q ss_pred EEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHHHHH
Q 013679 239 VIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEGISF 318 (438)
Q Consensus 239 IiAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea~~~ 318 (438)
||||+++||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.+||++|+++||+++.+|+|+|++||+++
T Consensus 238 viAD~~a~p~~iAaDllaQAEH~~~a~~ilvt~~~~l~-~~v~~~i~~~l~~l~r~~i~~~s~~~~~ii~v~~~~ea~~~ 316 (431)
T d1k75a_ 238 VIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEI 316 (431)
T ss_dssp EEECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHHHTCSSCHHHHHHHTTCEEEECSSHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHhccCCcccceeEEEeccHHHH-HHHHHHHHHHhhhchHHHHHHhhhccceEEEecCHHHHHHH
Confidence 99999999999999999999999999999999999996 99999999999999999999999998889999999999999
Q ss_pred hhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeCHHH
Q 013679 319 SNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEG 398 (438)
Q Consensus 319 ~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s~~~ 398 (438)
+|+||||||+|+++||++++++|+|||+||||+|||+++|||++||||||||+|+|||+|||||+||||++|++++|+++
T Consensus 317 ~N~~APEHL~l~~~~~~~~~~~i~nAGsIflG~~sp~a~GDY~aGpnHvLPT~G~Ar~~sgLsv~dF~k~~s~~~~s~~~ 396 (431)
T d1k75a_ 317 SNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEG 396 (431)
T ss_dssp HHHHCCSEEEEESTTHHHHGGGCCCCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCCCGGGGEEEEEEEEECHHH
T ss_pred HHhhhHHHHHHHhcCHHHHHhhhhhcchhhcCCCCcchhhccccCCCccCCCCCceeecCCCCHHHeeeeeeEEEECHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHhhCCHHHHHHHHHHHHhhhh
Q 013679 399 LKKLGPYVATMAEIEGLEAHKRAVTFRLQDIEA 431 (438)
Q Consensus 399 ~~~~~~~~~~lA~~EGL~aHa~sv~~R~~~~~~ 431 (438)
++++++.+.+||++|||++|++|+++|++..++
T Consensus 397 ~~~l~~~~~~lA~~Egl~aHa~sv~~Rl~~~~~ 429 (431)
T d1k75a_ 397 FSALASTIETLAAAERLTAHKNAVTLRVNALKE 429 (431)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999987554
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=97.08 E-value=0.024 Score=55.43 Aligned_cols=289 Identities=17% Similarity=0.105 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceE-------EecCceEEEEEEEecceeeEeecCCCCCCchHhhh-hcccceecCC
Q 013679 77 AVKEAFDVAYNNIYAFHLAQKSAETSV-------ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALM-LSVPAQIAGC 148 (438)
Q Consensus 77 ~~~~ai~~A~~nI~~fh~~q~~~~~~~-------~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM-~aiPAkvAGV 148 (438)
+.+..+..++...+.++.......+.. ....|...-.++.|+.-|++..|= .||...++ ...||-.+|+
T Consensus 95 ~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~---n~P~~~~~~~~~~aL~aGN 171 (474)
T d1euha_ 95 SAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPF---NYPVNLAGSKIAPALIAGN 171 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCT---TSTTHHHHHHHHHHHHTTC
T ss_pred hhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccc---cccchhhhhhchhhhhccc
Confidence 344445666666666655333221111 123345555678899999999984 56655444 4557778885
Q ss_pred CeEEEecCCCCCCCCC-HHHHHHHHHcCCc-hhhhc---chHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHH-HhcCC
Q 013679 149 KTVVLATPPSQDGSIC-KEVLYCAKKAGVT-HILKA---GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQNS 222 (438)
Q Consensus 149 ~~Iv~~TPP~~~G~i~-p~iL~AA~l~Gv~-eIy~v---GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~-~v~~~ 222 (438)
.=|+ -|+. .-... ..+.-+...+|.. .++.+ .|.+....|.= -|.||+|.-.|..=+-...+ ..+..
T Consensus 172 ~vV~--Kps~-~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~----~~~v~~v~ftGs~~~~~~i~~~a~~k 244 (474)
T d1euha_ 172 VIAF--KPPT-QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVE----HQAVNFINFTGSTGIGERIGKMAGMR 244 (474)
T ss_dssp EEEE--ECCS-TTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTTTS
T ss_pred ccee--cccc-cchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHh----CCCccEEEecCccccccchhhhcccc
Confidence 5443 3542 11111 1233455567775 34332 35555554542 48899999888775543322 12221
Q ss_pred CCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCCH----
Q 013679 223 EAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRG---- 294 (438)
Q Consensus 223 ~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~---- 294 (438)
.+-+. +.|.+ .+|-|++||.+.+|-+++.-+=++ ..+...++... +.. +++...+..++..+...
T Consensus 245 --~~~~e-~gG~~--~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~-~~~-~~~~~~l~~~~~~~~~~~~~~ 317 (474)
T d1euha_ 245 --PIMLE-LGGKD--SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME-SVA-DELVEKIREKVLALTIGNPED 317 (474)
T ss_dssp --CEEEE-CCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEH-HHH-HHHHHHHHHHHHTSCBSCGGG
T ss_pred --eEEEe-cCCcc--eEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhh-hhh-hhhhHhhhhhhhhccccCccc
Confidence 13222 33444 345578899999999988644322 22333444433 343 66666666665533311
Q ss_pred -------------HHHHHh------------------------------------hc---CC---eEEEeCCHHHHHHHh
Q 013679 295 -------------EFASKA------------------------------------LG---HS---FMVFARDMLEGISFS 319 (438)
Q Consensus 295 -------------~ia~~s------------------------------------l~---~g---~ii~v~~l~ea~~~~ 319 (438)
+...+. +. .| .++.++|+|||++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~ 397 (474)
T d1euha_ 318 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEIS 397 (474)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHHhhhcccccccccCCCCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHHHHH
Confidence 000000 11 13 566799999999999
Q ss_pred hhhcccc--ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCccccccccee
Q 013679 320 NLYAPEH--LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYM 389 (438)
Q Consensus 320 N~~APEH--Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~ 389 (438)
|.- +-. ..|.++|.. +++..++ +|.|++..++..+.++ +|. +|+.|+.+.-+++.|+..-
T Consensus 398 n~~-~~glta~v~s~d~~~~~~~~~~l~-~g~v~iN~~~~~~~~~--------~pfGG~~~SG~G~~~g~~~l~~~~~~k 467 (474)
T d1euha_ 398 NKS-EYGLQASIFTNDFPRAFGIAEQLE-VGTVHINNKTQRGTDN--------FPFLGAKKSGAGIQGVKYSIEAMTTVK 467 (474)
T ss_dssp HHS-SEESEEEEECSCHHHHHHHHHHSC-SSEEEESSCCCCCSTT--------SCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred HCC-CCCCeEEEEeCCHHHHHHHHHhCC-EEEEEEECCCCCCCCC--------CCccccccCccCccCHHHHHHHhCcEE
Confidence 973 323 466677765 4556664 8999998766544332 554 4577887778888888776
Q ss_pred eEE
Q 013679 390 TVQ 392 (438)
Q Consensus 390 s~~ 392 (438)
++.
T Consensus 468 ~v~ 470 (474)
T d1euha_ 468 SVV 470 (474)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.28 E-value=1.6 Score=42.95 Aligned_cols=326 Identities=14% Similarity=0.089 Sum_probs=169.3
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC--CC-
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS--AE- 100 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~--~~- 100 (438)
..++-.+.++.+.+.++++.|+=....++.--+ --.+.+.-+..++..++.|.+..+. ..
T Consensus 94 s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk-----------------~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 156 (516)
T d1uzba_ 94 PQEDRSRLLLKAAALMRRRKRELEATLVYEVGK-----------------NWVEASADVAEAIDFIEYYARAALRYRYPA 156 (516)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC-----------------CHHHHHHHHHHHHHHHHHHHHHHGGGCSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------------CccccchhHHHHHHHHHHHHHHHHhhhhcc
Confidence 344555666677777777776543333333221 1112333455666666666543322 11
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcC
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAG 175 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~G 175 (438)
......++...-.++.|+.-|++..|= -||- ..+...+||-.||+.=|+-.+| ..|. +..+.+.+|
T Consensus 157 ~~~~~~~~~~~~~~~~P~Gvv~~I~Pw---N~Pl~~~~~~~~~ALaaGN~Vv~Kps~------~~p~~~~~l~~~~~~ag 227 (516)
T d1uzba_ 157 VEVVPYPGEDNESFYVPLGAGVVIAPW---NFPVAIFTGMIVGPVAVGNTVIAKPAE------DAVVVGAKVFEIFHEAG 227 (516)
T ss_dssp CCCCCCTTEEEEEEEEECCEEEEECCS---SSTTHHHHHHHHHHHHTTCEEEEECCG------GGHHHHHHHHHHHHHHT
T ss_pred cccccccccceeEEeeccCcccccccc---ccccccccccccchhhhcccccccccc------hhHHHHHHHHHHHHHhC
Confidence 122234455566678999999999994 4554 4556688999999865554332 3342 222334455
Q ss_pred Cc-hhhh---cchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHH-HhcC-----CCC-cccccCCCCCceEEEEecCC
Q 013679 176 VT-HILK---AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKM-ILQN-----SEA-MISIDMPAGPSEVLVIADIY 244 (438)
Q Consensus 176 v~-eIy~---vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~-~v~~-----~~~-~VgID~~AGPSEvlIiAD~~ 244 (438)
.. .++. -.|.+.-..|. +-|.||+|.=-|..-|-..-. ..+. .++ .|... +.|-+ -+|-+++
T Consensus 228 lP~gv~~~v~g~~~~~~~~L~----~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lE-lgG~~--p~iV~~d 300 (516)
T d1uzba_ 228 FPPGVVNFLPGVGEEVGAYLV----EHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVE-TGGKN--AIIVDET 300 (516)
T ss_dssp CCTTSEEECCCSSSHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEE-CCCCE--EEEECTT
T ss_pred cCcCeEEEccCChHHHHHHHH----hCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheee-ccCcc--ceeeecc
Confidence 42 2222 23444444443 247788876555543321100 0010 000 01010 12222 3455677
Q ss_pred CCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------------C---H----HHHHH
Q 013679 245 ASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------R---G----EFASK 299 (438)
Q Consensus 245 Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------------r---~----~ia~~ 299 (438)
||.+..+-+++.-+=. --.+...++.. ++.. ++..+.+.+.++.+. . . +.++.
T Consensus 301 Ad~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~-~~i~-d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~ 378 (516)
T d1uzba_ 301 ADFDLAAEGVVVSAYGFQGQKCSAASRLILT-QGAY-EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEI 378 (516)
T ss_dssp SCHHHHHHHHHHHHHGGGGCSTTCEEEEEEE-HHHH-HHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhcccCCCcccccCccccc-cccc-cchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHHHH
Confidence 9999888777764411 12233444443 2232 444444444443321 0 0 11111
Q ss_pred hh------------------------------------c-CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH--
Q 013679 300 AL------------------------------------G-HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK-- 336 (438)
Q Consensus 300 sl------------------------------------~-~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~-- 336 (438)
+. + .| .++.++|.|||++++|.-- +=-..|.++|...
T Consensus 379 a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~ 458 (516)
T d1uzba_ 379 GKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458 (516)
T ss_dssp HTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred HHHCCCEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHH
Confidence 11 1 12 3455899999999999741 1224577888764
Q ss_pred -HHhhcccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCc-ccccccceeeEE
Q 013679 337 -WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGV-SLDSFLKYMTVQ 392 (438)
Q Consensus 337 -~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgL-sv~~FlK~~s~~ 392 (438)
+..++ ++|.|++..++.- ...|.+|-+| +.|..||. ++..|++.-++.
T Consensus 459 ~~~~~l-~~G~v~iN~~~~~-------~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~ 513 (516)
T d1uzba_ 459 WARREF-HVGNLYFNRKITG-------ALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHS-CCSEEEESSCSCC-------CCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHhC-CEeEEEEcCCCCC-------CCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEE
Confidence 44455 5899999865332 2345677665 56777664 477887776664
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.11 E-value=0.32 Score=46.44 Aligned_cols=335 Identities=11% Similarity=0.073 Sum_probs=169.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC--CC
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS--AE 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~--~~ 100 (438)
....+-.+.++++.+.++++-|+=..-.++...+...+ -+.+.+++.-.+.. +-|+.+++.++.|.....+ ..
T Consensus 20 ~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~--~~~e~~~~rl~~~~---~~i~~~~~~~~~~~~~~~~~~~~ 94 (414)
T d1o20a_ 20 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARER--GVKESLVDRLALND---KRIDEMIKACETVIGLKDPVGEV 94 (414)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--TCCHHHHHHHCCCH---HHHHHHHHHHHHHHHSCCCTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhc--cccHHHHHHHhccH---HHHHHHHHHHHHHHHhhhhcccc
Confidence 34455566777778888888876444444433321100 00000000001221 2356677788877653322 12
Q ss_pred ceEE-ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHH-------
Q 013679 101 TSVE-NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCA------- 171 (438)
Q Consensus 101 ~~~~-~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA------- 171 (438)
.... ...+. ..+..|+.-+.+-+|- .+|+ ...+...+||-.||+.-|+--+| ..|.+- ..+
T Consensus 95 ~~~~~~~~~~--~~~~~~~gv~~~~~p~-n~p~-~~~~~~~~~alaaGN~vvlKps~------~tp~~~~~~~~l~~~a~ 164 (414)
T d1o20a_ 95 IDSWVREDGL--RIARVRVPIGPIGIIY-ESRP-NVTVETTILALKSGNTILLRGGS------DALNSNKAIVSAIREAL 164 (414)
T ss_dssp EEEEECTTSC--EEEEEEEECCCEEEEC-CSCT-HHHHHHHHHHHHTTCCEEEECCG------GGHHHHHHHHHHHHHHH
T ss_pred cccccccccc--ceeecccccccccccc-cCcH-HHhhhccchheecccchhccccc------ccccccchhhhHHHhhh
Confidence 2222 22333 3345566666777784 4444 45566778999999887665433 233221 112
Q ss_pred HHcCCchhhh--c--chHHHHHHHhhcCCCCCCceEEe-cCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCC
Q 013679 172 KKAGVTHILK--A--GGAQAISAMAWGTESCPKVEKIF-GPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 172 ~l~Gv~eIy~--v--GGAQAIAAlAyGTetIp~VDkIv-GPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~An 246 (438)
...|+-...- + ++.++...+- .- -..++.+. +.|..-...|.+.... +-+- .|..--.||-|++||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~v~~~a~~~~~~----~~le--~gGgn~~viv~~dAd 235 (414)
T d1o20a_ 165 KETEIPESSVEFIENTDRSLVLEMI-RL--REYLSLVIPRGGYGLISFVRDNATV----PVLE--TGVGNCHIFVDESAD 235 (414)
T ss_dssp TTSSSCGGGEEECCCCCTHHHHHHT-TC--TTTCSEEEECSCHHHHHHHHHHCSS----CBCC--CCCCCEEEEECTTSC
T ss_pred hhccccccccccccccchhhhhhcc-cc--cccCeEEEcccHHHHHHHhhhcccc----ceec--ccCCCCCeecccccc
Confidence 2235543322 1 1223333332 11 12233333 3343333333333332 3333 355555688888999
Q ss_pred HHHHHHhhhhccCcCCC---Cc-eEEEecCchhhHHHHHHHHHHHHhcCC----CHHHHHHhhc--------------CC
Q 013679 247 PVHIAADLLSQAEHGPD---SQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----RGEFASKALG--------------HS 304 (438)
Q Consensus 247 p~~vAaDLLaQAEHd~~---a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r~~ia~~sl~--------------~g 304 (438)
.+..+..++.-+=+... +. -++|. ++.. ++..+.+.++..... ..+...+... .|
T Consensus 236 ~~~A~~~~~~~~~~~gq~C~a~~r~~V~--~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~Fg 312 (414)
T d1o20a_ 236 LKKAVPVIINAKTQRPGTCNAAEKLLVH--EKIA-KEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYLD 312 (414)
T ss_dssp HHHHHHHHHHHHHSCTTSTTSEEEEEEE--HHHH-HHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCCS
T ss_pred hhhhhhHHHhhhhcCCcccccccccchh--HHHH-HHHHHHHhHHHHHcCCccccchhhhhhcccceecccccCCceeee
Confidence 99866555555544422 11 24443 3453 666665555554432 1122222111 12
Q ss_pred ---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCC---Cc-
Q 013679 305 ---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY---GY- 373 (438)
Q Consensus 305 ---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~---G~- 373 (438)
.++.++|+|||++++|..--=| ..|.++|... +..+| ++|.|++...+ .+.|. ++ +|=+ |.
T Consensus 313 Pvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i-~~G~V~IN~~~--~~~~~---~~--~g~g~~~G~~ 384 (414)
T d1o20a_ 313 LIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEI-DAAAVYVNAST--RFTDG---GQ--FGFGAEIGIS 384 (414)
T ss_dssp SEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCG--GGCST---TT--TTCSCCSCEE
T ss_pred eEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhC-CeeEEEEeCCC--cCCCC---CC--CCCCCceecc
Confidence 4677999999999999985444 5788888865 44444 47999999633 33331 11 2222 11
Q ss_pred -cccc--cCcccccccceeeEE
Q 013679 374 -ARMY--GGVSLDSFLKYMTVQ 392 (438)
Q Consensus 374 -AR~~--sgLsv~~FlK~~s~~ 392 (438)
.|+. |+.++..|+..-+++
T Consensus 385 ~~~~~~~G~~gl~~~t~~K~vv 406 (414)
T d1o20a_ 385 TQRFHARGPVGLRELTTYKFVV 406 (414)
T ss_dssp CSSSSCCEECCTGGGEEEEEEE
T ss_pred CCCCCCCchhHHHHhCeEEEEE
Confidence 2433 678888897776665
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=95.03 E-value=1.2 Score=43.59 Aligned_cols=292 Identities=15% Similarity=0.100 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEE------ecCceEEEEEEEecceeeEeecCCCCCCchHhhh-hcccceecCCCeE
Q 013679 79 KEAFDVAYNNIYAFHLAQKSAETSVE------NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALM-LSVPAQIAGCKTV 151 (438)
Q Consensus 79 ~~ai~~A~~nI~~fh~~q~~~~~~~~------~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM-~aiPAkvAGV~~I 151 (438)
+.-+..+++.++-|-..-..-.+... ...+...-.++.|+.-|++..|= .||-...| ..+||-.+|+.=|
T Consensus 111 ~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~---N~P~~~~~~~~~~ALaaGn~Vi 187 (499)
T d1ky8a_ 111 VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPF---NYPLFDAVNKITYSFIYGNAVV 187 (499)
T ss_dssp HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccc---cccchhhhhcchhhhccccccc
Confidence 34466666666644322111111111 12345556778999999999884 56655444 6689999998744
Q ss_pred EEecCCCCCCCCCHHHH-HHHHHcCC----chhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcc
Q 013679 152 VLATPPSQDGSICKEVL-YCAKKAGV----THILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMI 226 (438)
Q Consensus 152 v~~TPP~~~G~i~p~iL-~AA~l~Gv----~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~V 226 (438)
+-.+| .-......+ .....+|. -.+..-.|. ....|. +-|.+|+|.+-|..=+..+....... ..+
T Consensus 188 ~Kps~---~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~l~----~~~~i~~v~ftGs~~~g~~i~~~~~~-~~~ 258 (499)
T d1ky8a_ 188 VKPSI---SDPLPAAMAVKALLDAGFPPDAIALLNLPGK-EAEKIV----ADDRVAAVSFTGSTEVGERVVKVGGV-KQY 258 (499)
T ss_dssp EECCT---TSCHHHHHHHHHHHHHTCCTTSEEECCCCGG-GGHHHH----HCTTCCEEEEESCHHHHHHHHHHHCS-SEE
T ss_pred ccccc---cchhhhhhhccccccccccceeeecccCChH-HHHHHh----hccceeEEEeecccccceEEeecccc-cce
Confidence 44333 111112222 22223332 222212222 223332 13778888888875443332222110 011
Q ss_pred cccCCCCCceEEEEecCCCCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----------
Q 013679 227 SIDMPAGPSEVLVIADIYASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------- 292 (438)
Q Consensus 227 gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------- 292 (438)
-.. +.|- --+|-+++||.+.+|-.++.=+ =.--.+...++.. ++.. +++.+.+..+++.+.
T Consensus 259 ~lE-lgG~--np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~-~~v~-d~f~~~l~~~~~~l~~G~p~~~~~~ 333 (499)
T d1ky8a_ 259 VME-LGGG--DPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAE-RPVY-GKLVEEVAKRLSSLRVGDPRDPTVD 333 (499)
T ss_dssp EEE-CCCC--EEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred EEe-cCCC--CeEEEcCCcChhhhhhhhhhhhhccCccccccccccccc-chhH-HHHHHHHHHHHHhCccCCCCCcccc
Confidence 111 1122 2245578899998877765322 1223455555553 4454 777777777776641
Q ss_pred -----C-------HHHHHHhhc---------------------------------------CC---eEEEeCCHHHHHHH
Q 013679 293 -----R-------GEFASKALG---------------------------------------HS---FMVFARDMLEGISF 318 (438)
Q Consensus 293 -----r-------~~ia~~sl~---------------------------------------~g---~ii~v~~l~ea~~~ 318 (438)
+ .+....++. .| .|+.++|.|||+++
T Consensus 334 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~ 413 (499)
T d1ky8a_ 334 VGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIEL 413 (499)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccccccCCCCChhhhccccCceEEEEEcCCHHHHHHH
Confidence 1 112221221 12 34568899999999
Q ss_pred hhhh-ccccceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCccccccccee
Q 013679 319 SNLY-APEHLIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYM 389 (438)
Q Consensus 319 ~N~~-APEHLel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~ 389 (438)
+|.- -+=-..|.++|.. +++.+++ +|.|++...+..+. -.+|-+ |..|..|..+++.|++..
T Consensus 414 ~n~~~~gLt~sv~s~d~~~~~~~~~~l~-~G~v~iN~~~~~~~--------~~~PfGG~k~SG~G~~~g~~~~~~~~~~k 484 (499)
T d1ky8a_ 414 ANGRPYGLDAAVFGRDVVKIRRAVRLLE-VGAIYINDMPRHGI--------GYYPFGGRKKSGVFREGIGYAVEAVTAYK 484 (499)
T ss_dssp HHTSSEESEEEEECCCHHHHHHHHHHCC-SSEEEETSCCCCTT--------SSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCC-EeEEEEeCCCCCCC--------CCCCccccccCcCCCCCHHHHHHHhhCEE
Confidence 9974 1223567778875 4566665 89999987544322 346644 578888899999999988
Q ss_pred eEE-EeCH
Q 013679 390 TVQ-SLTE 396 (438)
Q Consensus 390 s~~-~~s~ 396 (438)
++. .++.
T Consensus 485 ~i~~~~~~ 492 (499)
T d1ky8a_ 485 TIVFNYKG 492 (499)
T ss_dssp EEEEECTT
T ss_pred EEEEcCCC
Confidence 854 3444
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.89 E-value=0.58 Score=45.30 Aligned_cols=282 Identities=15% Similarity=0.128 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEec
Q 013679 77 AVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLAT 155 (438)
Q Consensus 77 ~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~T 155 (438)
..++.++.+++++.++.+.+.... . ....+...-.++.|+.-|++..|= -||-. ++...+||-.+|+. |++-
T Consensus 64 ~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~--vi~K 136 (446)
T d1ad3a_ 64 HVLEELDTTIKELPDWAEDEPVAK-T-RQTQQDDLYIHSEPLGVVLVIGAW---NYPFNLTIQPMVGAVAAGNA--VILK 136 (446)
T ss_dssp HHHHHHHHHHHHHHHHHSCEECCC-C-STTTTSEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEEE
T ss_pred HHHHHHHHHHHHHHHhhccccccc-C-CCCCCcceEEEeecceeEeccccc---ccccccccccccccchhccc--cccc
Confidence 345567777777777654332211 1 112333445567899999999993 45544 55566799888887 3333
Q ss_pred CCCCCCCCCHHH---HHHHHHcCCch--hhhc-chHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCC
Q 013679 156 PPSQDGSICKEV---LYCAKKAGVTH--ILKA-GGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSE 223 (438)
Q Consensus 156 PP~~~G~i~p~i---L~AA~l~Gv~e--Iy~v-GGAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~ 223 (438)
|+. ..|.+ ++.+...+... +..+ |+....+.+. -+++|+|.==|..= -.+|+.+.
T Consensus 137 ps~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~fTGs~~~G~~i~~~aa~~~~---- 203 (446)
T d1ad3a_ 137 PSE----VSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELL-----KERFDHIMYTGSTAVGKIVMAAAAKHLT---- 203 (446)
T ss_dssp CCS----TTHHHHHHHHHHHHHHSCTTTEEECCCSHHHHHHHT-----TSCCSEEEEESCHHHHHHHHHHHHTTTC----
T ss_pred ccc----eeccccccccccccccccccccccccccchhhhhhc-----ccccCceEEECcHHHHHHHHHHHHhcCC----
Confidence 442 33322 22111112111 1122 3333333332 35567665555432 23332211
Q ss_pred CcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcC--------
Q 013679 224 AMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSL-------- 291 (438)
Q Consensus 224 ~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l-------- 291 (438)
.|-. -+.|-+ -+|-|++||.+..|-+++.-+=.+ -.+...++.. ++.. +++.+.+.+.++.+
T Consensus 204 -~~~l-ElgG~n--p~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~-~~i~-~~f~~~l~~~~~~~~g~~~~~~ 277 (446)
T d1ad3a_ 204 -PVTL-ELGGKS--PCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCD-PSIQ-NQIVEKLKKSLKDFYGEDAKQS 277 (446)
T ss_dssp -CEEE-ECCCCC--EEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEEC-GGGH-HHHHHHHHHHHHHHHCSCGGGC
T ss_pred -cEEE-ECCCcC--cEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccc-cchh-HHHHHhhhhhhheeeccccccc
Confidence 0111 112322 245578899999888877544222 2233334433 3343 55555554433210
Q ss_pred -------C--CHHHHHHhh-----------------------------------c-CC---eEEEeCCHHHHHHHhhhhc
Q 013679 292 -------P--RGEFASKAL-----------------------------------G-HS---FMVFARDMLEGISFSNLYA 323 (438)
Q Consensus 292 -------~--r~~ia~~sl-----------------------------------~-~g---~ii~v~~l~ea~~~~N~~A 323 (438)
. +.+.....+ + .| .++.++|+|||++++|..-
T Consensus 278 ~~~gp~i~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~ 357 (446)
T d1ad3a_ 278 RDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQRE 357 (446)
T ss_dssp TTSCCCSCHHHHHHHHHTTTTSCEEECCCEETTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSC
T ss_pred ccccchhhhhhhhhhhccccchhcccceeecCCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCC
Confidence 0 011111111 1 13 4567899999999999862
Q ss_pred ccc-ceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 324 PEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 324 PEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
==| ..|.++|... ++.++ ++|.|++..++.-... ..+|-+ |..|+.|..+++.|...-++.
T Consensus 358 ~gl~a~v~t~d~~~a~~~~~~l-~~G~v~iN~~~~~~~~-------~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~ 427 (446)
T d1ad3a_ 358 KPLALYVFSNNEKVIKKMIAET-SSGGVTANDVIVHITV-------PTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427 (446)
T ss_dssp CCSEEEEECSCHHHHHHHHTTC-CCSEEEESSSSGGGGC-------TTSCCCCCGGGEECCCSTHHHHHHTEEEEEEE
T ss_pred CCCEEEEEcCCHHHHHHHHHhC-CEeEEEEeCCccCCCC-------CCCCccccccceeccchHHHHHHHHhceeEEE
Confidence 212 4567888754 56666 4899999975432111 124554 566777777888888877654
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.94 E-value=2.9 Score=40.39 Aligned_cols=335 Identities=14% Similarity=0.123 Sum_probs=160.4
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhccCCC-
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPEL-DAAVKEAFDVAYNNIYAFHLAQKSAE- 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l-~~~~~~ai~~A~~nI~~fh~~q~~~~- 100 (438)
.+.++..+.+..|-+.++++-|+=+.+-.+......-. -+++..++.-.+ +.+-.+.+-...++|..++ -|-.
T Consensus 22 ~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~--g~~~~~idRL~l~~~~ri~~~~~~l~~i~~~~---dpvg~ 96 (436)
T d1vlua_ 22 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKET--GLADSLLKRLDLFKGDKFEVMLQGIKDVAELE---DPVGK 96 (436)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS--SCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSC---CSSSC
T ss_pred CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHc--CCcHHHHHHHhcCchHHHHHHHHHHHHHHhcc---cccee
Confidence 44556667777777777888776443322211110000 001110010012 1122344434444443331 1211
Q ss_pred --ceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH---------H
Q 013679 101 --TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL---------Y 169 (438)
Q Consensus 101 --~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL---------~ 169 (438)
......+|..+.++-.|+.-||+- |= .+|.+.+..+.||-.+| +-|+.-|.. +.......| .
T Consensus 97 ~~~~~~~~~gl~~~~~~~P~GVigiI-~e---~~P~vt~~~~~lalksG--NavIlk~~~-~a~~s~~~l~~~~~~al~~ 169 (436)
T d1vlua_ 97 VKMARELDDGLTLYQVTAPVGVLLVI-FE---SRPEVIANITALSIKSG--NAAILKGGK-ESVNTFREMAKIVNDTIAQ 169 (436)
T ss_dssp EEEEEEEETTEEEEEEEEECCEEEEE-ES---SCTHHHHHHHHHHHHHT--CEEEEECCG-GGHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccccceEEEeeeeeeeeecc-cc---ccchhhhhhhhcccccC--CcceecCCc-ccccCHHHHHHHHHHhhhh
Confidence 122346799999999999999974 53 57888888889998888 555555642 211111111 2
Q ss_pred HHHHcCCchh--hhc-chHHHHHHHhhcCCCCCCceEEe--cCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCC
Q 013679 170 CAKKAGVTHI--LKA-GGAQAISAMAWGTESCPKVEKIF--GPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIY 244 (438)
Q Consensus 170 AA~l~Gv~eI--y~v-GGAQAIAAlAyGTetIp~VDkIv--GPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~ 244 (438)
+...+|..+. ..+ ++ ..++.+ ...-+.||.|+ | |+.-|..+.+.-. +-+ +..|+-=.-++-|++
T Consensus 170 a~~~aGlP~~~i~~v~~~-~~v~~~---l~~~~~Id~ii~tG-g~~lv~~v~~~~~-----~pv-i~~~~G~~~~~Vd~~ 238 (436)
T d1vlua_ 170 FQSETGVPVGSVQLIETR-QDVSDL---LDQDEYIDLVVPRG-SNALVRKIKDTTK-----IPV-LGHADGICSIYLDED 238 (436)
T ss_dssp HHHHHCCCTTSEEECCCC---CGGG---GGCTTTCCEEEEES-CHHHHHHHHHTCC-----SCB-TTBCSCCEEEEECTT
T ss_pred hccccCCCCceEEEecch-hHHHHH---hccCCCCceEEEec-CCceeeeeecccc-----ceE-EEecCCccceeeccc
Confidence 2334576441 111 33 233322 22457888874 4 4445555443221 111 335666777899999
Q ss_pred CCHHHHHHhhhhcc-CcCC----CCceEEEecCchhhHHHHHHHHHHHHhc---CC-CHH--------------------
Q 013679 245 ASPVHIAADLLSQA-EHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQS---LP-RGE-------------------- 295 (438)
Q Consensus 245 Anp~~vAaDLLaQA-EHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~---l~-r~~-------------------- 295 (438)
||.+..+ +.+-.+ =..+ -+..+||-.+ .+ +.....+....+. +. -.+
T Consensus 239 ADl~~A~-~~i~~ak~~~~g~C~a~e~llV~e~--ia-~~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (436)
T d1vlua_ 239 ADLIKAK-RISLDAKTNYPAGCNAMETLLINPK--FS-KWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQ 314 (436)
T ss_dssp CCHHHHH-HHHHHTTCC----CCCCEEEEECTT--ST-THHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHH
T ss_pred ccHHHHH-HHHHHHhccCCCccccccceeecHh--hh-hhhhhhHHHHHhCCcEEEeCHHHHHHhhhhhhhccccccccc
Confidence 9999854 444443 2222 1223666433 32 3322222211111 00 000
Q ss_pred ------HHHHhhc--C-C---eEEEeCCHHHHHHHhhhhcccc-ceecccChHH---HHhhcccccccccCCCCccccc-
Q 013679 296 ------FASKALG--H-S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAEK---WESIIENAGSVFLGEWTPESVG- 358 (438)
Q Consensus 296 ------ia~~sl~--~-g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~G- 358 (438)
-...-|. . + .+..|+|+|||++++|++-.-| -.|.++|... ++..| ++|.||+...|--+=|
T Consensus 315 ~~~~~~~~~~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~v-da~~V~vNasTrf~Dg~ 393 (436)
T d1vlua_ 315 CKTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGV-DSSGVYWNASTRFADGF 393 (436)
T ss_dssp TTBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHC-CCSEEEESSCGGGCC--
T ss_pred ccccCCCcccchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhC-CceEEEEcCCCccCCCC
Confidence 0112243 1 2 5677999999999999999988 5677888865 33333 4788999853322212
Q ss_pred ccccCCCCCCCCCCcccc--ccCcccccccce
Q 013679 359 DYASGTNHVLPTYGYARM--YGGVSLDSFLKY 388 (438)
Q Consensus 359 DY~aGpNHvLPT~G~AR~--~sgLsv~~FlK~ 388 (438)
-|--|+-==+-| .|. +|++++....-.
T Consensus 394 ~~g~g~e~Gist---~k~h~rGp~gl~~ltt~ 422 (436)
T d1vlua_ 394 RYGFGAEVGIST---SKIHARGPVGLDGLVSY 422 (436)
T ss_dssp -----------------------CCSGGGEEE
T ss_pred cccCcceeeEec---CCCCCCCCcChHHhceE
Confidence 344443211123 333 666666665433
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=91.68 E-value=0.14 Score=50.87 Aligned_cols=87 Identities=20% Similarity=0.344 Sum_probs=56.6
Q ss_pred eEEEeCCHHHHHHHhhhhccccce--eccc--C---hHHHHhhccc-ccccccCCCCc-ccccccccCCCCCCCCCCc--
Q 013679 305 FMVFARDMLEGISFSNLYAPEHLI--VNVK--D---AEKWESIIEN-AGSVFLGEWTP-ESVGDYASGTNHVLPTYGY-- 373 (438)
Q Consensus 305 ~ii~v~~l~ea~~~~N~~APEHLe--l~~~--~---p~~~l~~i~n-AGaiFlG~~sp-~a~GDY~aGpNHvLPT~G~-- 373 (438)
.|+-++|+|||++++|.. |--|. |.+. | .+++.++++. +|.|++..|+. ...++- +.|--|=+|+
T Consensus 380 ~i~~~~~~~eai~~an~~-~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~---~~~ggpf~g~~~ 455 (504)
T d1ez0a_ 380 LIVVCENVADMLSLSEML-AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYA---MVHGGPYPASTH 455 (504)
T ss_dssp EEEEESSHHHHHHHHHTC-CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSS---CCCCCSTTSCSC
T ss_pred eeeecCCHHHHHHHHHCC-CCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCc---CCCCCCCCCcCC
Confidence 345689999999999986 33454 6664 3 2457788874 99999998743 222221 2233332221
Q ss_pred ccc--ccCcccccccceeeEEEeC
Q 013679 374 ARM--YGGVSLDSFLKYMTVQSLT 395 (438)
Q Consensus 374 AR~--~sgLsv~~FlK~~s~~~~s 395 (438)
.++ .+.-+++.|+|++++|.+.
T Consensus 456 sg~~~~G~~~i~~f~r~v~~q~~p 479 (504)
T d1ez0a_ 456 SASTSVGAEAIHRWLRPVAYQALP 479 (504)
T ss_dssp SSCCSSSGGGGGGGEEEEEEESCC
T ss_pred CCCCcchHHHHHHHhchhhhccCC
Confidence 122 3678899999999998764
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=91.23 E-value=6.9 Score=37.76 Aligned_cols=320 Identities=14% Similarity=0.110 Sum_probs=174.5
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc-eEEe
Q 013679 27 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET-SVEN 105 (438)
Q Consensus 27 ~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~-~~~~ 105 (438)
+-.+.++.+.+.++++.|+=..-.++..-+. +.+....-+..+++.++.|-.....-.. ....
T Consensus 77 eR~~iL~kia~~L~~~~eela~l~~~E~Gk~----------------~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~ 140 (494)
T d1bxsa_ 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKL----------------FSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM 140 (494)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------HHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHhcCCc----------------hhhhhhhhhhhhhHHHHHHhhhhhhhcceeecC
Confidence 3345566666666666665433333332211 1111222345555566655443322222 2223
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCchHhhhh-cccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCc-hh
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALML-SVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVT-HI 179 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~-aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~-eI 179 (438)
..+...-.++.|+.-|++..|- -||..+.|. .+||-.||+.=| +-|.. ..|. +....+.+|.. .+
T Consensus 141 ~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~i~~ALaaGN~VV--lKpse----~tp~~a~~l~~~~~~aglP~gv 211 (494)
T d1bxsa_ 141 DGNFFTYTRSEPVGVCGQIIPW---NFPLLMFLWKIGPALSCGNTVV--VKPAE----QTPLTALHMGSLIKEAGFPPGV 211 (494)
T ss_dssp SSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT----TCCHHHHHHHHHHHHHTCCTTS
T ss_pred CCCceeEEEEccEEEEEEEeCc---cchhHHHHHHHHHHHHcCCeEE--EECCC----CChHHHHHHHHHHHHhCCCcCe
Confidence 3455555678999999999995 477666555 558999988544 44442 2332 33345556653 22
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
+.+ | |.+.-.+|. +=|+||+|.==|..=+- +|+..+-. |... +.|=+= +|-+++||.+..
T Consensus 212 ~~~v~g~~~~~~~~l~----~~p~v~~i~fTGS~~~g~~i~~~aa~~~~~~----~~lE-lGG~np--~iV~~dadl~~a 280 (494)
T d1bxsa_ 212 VNIVPGYGPTAGAAIS----SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKR----VSLE-LGGKSP--CIVFADADLDNA 280 (494)
T ss_dssp EEECCSCTTTHHHHHH----TCTTCSEEEEESCHHHHHHHHHHHHHTTCCE----EEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEEeCCchHHHHHHH----hCCCcCEEEecCCHHHHHHHHHHhcccCCCe----EEEE-cCCcCc--EEECcCcchhHh
Confidence 222 3 555555554 35789988644433221 23321100 1111 123332 344677999998
Q ss_pred HHhhhhccCcCCC----CceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhh---
Q 013679 251 AADLLSQAEHGPD----SQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKAL--- 301 (438)
Q Consensus 251 AaDLLaQAEHd~~----a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl--- 301 (438)
+.+++..+=+..- +...++.. ++.. ++..+.+.+.++.+. . .+.+.++.
T Consensus 281 ~~~i~~~~~~~~GQ~C~a~~rv~V~-~~~~-d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 358 (494)
T d1bxsa_ 281 VEFAHQGVFYHQGQCCIAASRLFVE-ESIY-DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEG 358 (494)
T ss_dssp HHHHHHHHHTTTTCCTTCCCEEEEE-HHHH-HHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCcccccceEEecc-cchh-HHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 8888765443331 22234443 3343 666666665555432 0 01112221
Q ss_pred ----------------------------------c-CC---eEEEeCCHHHHHHHhhhhccccc--eecccChH---HHH
Q 013679 302 ----------------------------------G-HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDAE---KWE 338 (438)
Q Consensus 302 ----------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p~---~~l 338 (438)
+ .| .|+.++|+|||++++|.. +--| .|.++|.. +++
T Consensus 359 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~-~~gL~a~i~t~d~~~~~~~~ 437 (494)
T d1bxsa_ 359 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNT-FYGLSAGIFTNDIDKAITVS 437 (494)
T ss_dssp CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCS-SCCSEEEEECSBHHHHHHHH
T ss_pred CEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCC-CCCCeEEEEeCCHHHHHHHH
Confidence 1 13 345689999999999985 3334 47788876 677
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceee-EEEeC
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMT-VQSLT 395 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s-~~~~s 395 (438)
.+++ +|.|++..++.. . + -+|-+ |+.|+.|.-+++.|++.-+ +++++
T Consensus 438 ~~l~-~G~v~iN~~~~~--~-----~--~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~~ 490 (494)
T d1bxsa_ 438 SALQ-SGTVWVNCYSVV--S-----A--QCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 490 (494)
T ss_dssp HHSC-CSEEEESCCCCC--C-----T--TSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HhCC-EeEEEEcCCCCc--C-----C--CCCcCccccccCChhhHHHHHHHhcceEEEEEecC
Confidence 7874 999999965321 1 1 25644 5777888888889988766 34444
|