Citrus Sinensis ID: 013895

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----
Protein Sequence
MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGDREGEAAFGRQTPIDLKTKLVRGKNSNTPKHRQWRKSLDS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHccccccccccccEEcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccEEEEEEEEccccccccccccccccccccEEEccccccccccccHHccccc
Coil and Loop (DISEMBL)
mkklsspdsvtfpgkptqfsaecwfddacilDMDYFVKTISgikakgvrpdLIGSIIAHYaskwlpdlayedankgltnfeespesvTASWMKKRFFVETLvgilppekdslpcnFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLkelmipsfshtcgtlLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAgalpsharatddGLYRAIDTYLKAHPEVTKQERKSLCRLidsrklspeaslhaaqndrlpVRAVIQVLFSEQAKLnkqldwsgsfsgirspnigfdpsaarclSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKgtffrwkklgiipsiksgsisvVDRIVegdregeaafgrqtpidlktklvrgknsntpkhrqwrkslds
Flexible Loop (DISEMBL)
mkklsspdsvtfpgkptqfsaECWFDDACILDMDYFVKTISGIkakgvrpdLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVgilppekdslPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLkahpevtkqERKSLCRLIDSRKLSPEASlhaaqndrlpVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLvekkkgtffrwkklgiipsiksgsisvVDRIVEGDregeaafgrqtpidlktklvrgknsntpkhrqwrkslds
Low Complexity Region (SEG)
MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWkklgiipsiksgsisVVDRIVEGDREGEAAFGRQTPIDLKTKLVRGKNSNTPKHRQWRKSLDS
Disordered region (IsUnstruct)
*****************QFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNF*****SVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEV*******LCRLI*****************RLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFD***ARCL**********EIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEG****************************************
Disordered Region (DISOPRED)
**********************CWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYED********************KKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKK******************AKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQ*********************************************************************************************************************************************
Disordered Region (DISEMBL)
************PGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTN*********ASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGDREGEAAFGRQTPIDLKTKLVRG*****************
Disordered Region (DISPRO)
********************AECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPD***********************WMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLD*****************************AQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGD**GEAAFGRQTPIDLKTKLVRG*****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKRExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGDREGEAAFGRQTPIDLKTKLVRGKNSNTPKHRQWRKSLDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	434	2.2.26 [Sep-21-2011]
Q5KS50	762	Coleoptile phototropism p	yes	no	0.804	0.458	0.368	1e-66
Q9LYW0	592	BTB/POZ domain-containing	no	no	0.801	0.587	0.366	1e-59
Q9S9Q9	665	BTB/POZ domain-containing	no	no	0.817	0.533	0.346	1e-57
Q9FMF5	746	Root phototropism protein	no	no	0.608	0.353	0.403	3e-57
Q9FNB3	591	Putative BTB/POZ domain-c	no	no	0.834	0.612	0.357	3e-56
Q9FKB6	614	BTB/POZ domain-containing	no	no	0.744	0.526	0.349	3e-53
Q9C9Z0	582	Putative BTB/POZ domain-c	no	no	0.769	0.573	0.352	5e-53
Q66GP0	604	BTB/POZ domain-containing	no	no	0.619	0.445	0.389	6e-52
Q682S0	593	Root phototropism protein	no	no	0.626	0.458	0.385	3e-51
O80970	634	BTB/POZ domain-containing	no	no	0.700	0.479	0.354	3e-51

>sp|Q5KS50|NPH3_ORYSJ Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1

 Score =  253 bits (647), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/442 (36%), Positives = 236/442 (53%), Gaps = 93/442 (21%)

Query: 3   KLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYAS 62
           K SSP     P       A+ WF+D  +L +D+FV+ ++ IK KG+R DLIG+ I HYAS
Sbjct: 255 KESSPSRQAVP------PADWWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYAS 308

Query: 63  KWLPDLAYEDANKGLTNFE----------------------------ESPESVTASWMKK 94
           KWLP L  +DA  G T+ E                            +   + +A   ++
Sbjct: 309 KWLPGLT-KDAPLGATHDEPWAQASAAGVGGGGLHMMIISGAGGGKDDVLAACSAPSREQ 367

Query: 95  RFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELM 154
           R  VE+++ I PP++DS+ C F LRLLR A M+   PA   ELEKR+  QL+QA+L +L+
Sbjct: 368 RMVVESIISITPPQRDSVSCGFLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLL 427

Query: 155 IPSFS-HTCGTLLDVELVSRLVKKF-VHLDIEGAKSGA---------------------- 190
           IPS+      T  DV+LV RLV+ F V    E A + +                      
Sbjct: 428 IPSYGGRAADTAYDVDLVQRLVEHFLVQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPS 487

Query: 191 ---------------ALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGL 235
                          A  +VA+L+D YL+E + D NLSL++F  LA +LP  ARA DDGL
Sbjct: 488 SAAAASASASTGGLNAKARVARLLDSYLSEVSRDRNLSLTKFQVLAESLPESARACDDGL 547

Query: 236 YRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAK 295
           YRA+D+YLKAHP +T+ ERK LCR++D +KLS +A +HAAQN+RLP+R V+QVLF+EQ K
Sbjct: 548 YRAVDSYLKAHPTLTEHERKRLCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLFTEQVK 607

Query: 296 LNKQLDWSGSFSGIRSPNIGFD-----PSAARCL--------------SKREVGAQQMEI 336
           ++  L  S +     S   G D     P+  R L              +K+++   + E+
Sbjct: 608 ISNALASSSAALRSSSSAPGADAAPAMPTTRRQLLDGTPQSFQEGWAAAKKDINTLKFEL 667

Query: 337 RKLREEVLRLQSQCNAMQVQIE 358
             ++ + L LQ + +A+Q Q++
Sbjct: 668 ESMKAKYLELQHEMDALQKQVD 689

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Plays a role as signal transduction component in coleoptile phototropism and lateral translocation of auxin.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LYW0|Y5325_ARATH BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana GN=At5g03250 PE=2 SV=1

 Score =  230 bits (587), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/387 (36%), Positives = 215/387 (55%), Gaps = 39/387 (10%)

Query: 8   DSVTFPGKPTQFSAE-CWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLP 66
           + ++  GK  Q + E  WFDDA  L +  F + I+ I+A+G++ + I   + +Y  K +P
Sbjct: 202 NGISASGKMLQHTGEDWWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVP 261

Query: 67  DLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANM 126
            +     N+ +   E+  E+   S   ++  +E +VG+LP +K   P  F LRLL+TA +
Sbjct: 262 LM-----NRQVNMDEQVIETPNPSEEDQKTCLEEIVGLLPSKKGVNPTKFLLRLLQTAMV 316

Query: 127 VNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFV------- 179
           ++   + RE LE+RI  QLDQA+L +L+IP+  ++  TL DVE V R++++FV       
Sbjct: 317 LHASQSSRENLERRIGNQLDQAALVDLLIPNMGYS-ETLYDVECVLRMIEQFVSSTEQAG 375

Query: 180 -----------HLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHA 228
                      HL  +GA        VA LVD YLAE A D NL L++F A+A A+P +A
Sbjct: 376 IVPSPCIIEEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYA 435

Query: 229 RATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQV 288
           R  DDG+Y AID YLKAHP +T  ER+ +CRL++ +KLS EAS HAAQN+RLP+R ++QV
Sbjct: 436 RPLDDGVYHAIDVYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQV 495

Query: 289 LFSEQAKLNKQLD-WSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQ 347
           LF EQ +L   +  W      + +P+     +      + E          +RE V  L+
Sbjct: 496 LFFEQLRLRTSVSGWFFVSENLDNPDNQHGANGGLLKPRGE---------NVRERVSELE 546

Query: 348 SQCNAMQVQIEKLVEKKKGTFFRWKKL 374
            +C  M+ ++ KLV  K+     WK  
Sbjct: 547 KECMNMKQELHKLVRTKRS----WKNF 569

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S9Q9|Y1044_ARATH BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2

 Score =  224 bits (571), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/398 (34%), Positives = 213/398 (53%), Gaps = 43/398 (10%)

Query: 8   DSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPD 67
           + ++   +P   S++ W++DA +L    F + I+ ++++G+R D+I   + +Y  K LP 
Sbjct: 200 NGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPG 259

Query: 68  LAYEDANKGLTNFEESP--ESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTAN 125
           L         +    +P       S  +++  +E +  +L  +K  +P  FF+ +LR A 
Sbjct: 260 LKRRRGGPESSGRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAK 319

Query: 126 MVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLD--- 182
           ++   P     LEKRI  QLDQA+L++L++PSFSHT  TL DV+ V R++  F+  D   
Sbjct: 320 ILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIM 379

Query: 183 ----------------IEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPS 226
                           I   +S   +  VAKL+D YLAE A D NL L +F ALA ++P 
Sbjct: 380 PGGVGSPCSSVDDGNLIGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPE 439

Query: 227 HARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVI 286
           +AR  DDGLYRAID YLK HP + + ER++LCRL+D +KLS EA  HAAQN+RLP+R ++
Sbjct: 440 YARLLDDGLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIV 499

Query: 287 QVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAAR------------------CLSKRE 328
           QVLF EQ +L   +  +G F  + S N+       R                    + RE
Sbjct: 500 QVLFFEQLQLRTSV--AGCF--LVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWATAVRE 555

Query: 329 VGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKG 366
               ++ +  +R  V  L+ +C+ M+ +IEKL +  KG
Sbjct: 556 NQVLKVGMDSMRMRVCELEKECSNMRQEIEKLGKTTKG 593

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMF5|RPT3_ARATH Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=2

 Score =  223 bits (567), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 182/317 (57%), Gaps = 53/317 (16%)

Query: 94  KRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKEL 153
           +R  VE+L+ I+PP+KDS+ C+F LRLLR ANM+ V PA   ELEKR+  Q +QA+L++L
Sbjct: 373 QRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITELEKRVGMQFEQATLQDL 432

Query: 154 MIPSFSHTCGTLLDVELVSRLVKKF-VHLDIEGAKSGA---------------------- 190
           +IP +++   T+ DV+LV RL++ F V    EG+                          
Sbjct: 433 LIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPSQSMYADIPRGNNNNGG 492

Query: 191 --------ALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTY 242
                   A ++VA+LVD YL E A D NL L++F  LA ALP  AR  DDGLYRAID+Y
Sbjct: 493 GGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSY 552

Query: 243 LKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDW 302
           LKAHP +++ ERK LCR++D +KLS +A +HAAQN+RLP+R V+QVLFSEQ K++  L  
Sbjct: 553 LKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVKISNALAN 612

Query: 303 S--------GSFSGIRSPNI------------GFDPSAARCLSKREVGAQQMEIRKLREE 342
           +        G   G   P I             F    A   +K+++   + E+  ++ +
Sbjct: 613 TSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAA--AKKDINTLKFELETVKTK 670

Query: 343 VLRLQSQCNAMQVQIEK 359
            + LQ++   MQ Q EK
Sbjct: 671 YVELQNEMEVMQRQFEK 687

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Involved in the phot1 pathway under low blue light (LBL) fluence rate and in the phot2 pathway under higher fluence rate of blue light (HBL). Necessary for root and hypocotyl phototropisms, but not for the regulation of stomata opening. Not involved in chloroplast accumulation and translocation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNB3|Y5360_ARATH Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana GN=At5g13600 PE=3 SV=1

 Score =  219 bits (558), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 218/386 (56%), Gaps = 24/386 (6%)

Query: 5   SSPDSVTFPGKPTQFSAECWF--DDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYAS 62
           ++  ++ + G  T+ ++E W+  D +  LD+  + + I  ++++GV   +I + + HYA 
Sbjct: 190 TTTTTIYWNGIQTKATSENWWFNDVSSFLDLPMYKRFIKTVESRGVNAGIIAASVTHYAK 249

Query: 63  KWLPDLAYEDANKGLTNFEESP---ESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLR 119
           + LP L    + K  +  EE     + +  S  ++R  +E +V +LP +K      F LR
Sbjct: 250 RNLPLLGC--SRKSGSPSEEGTNYGDDMYYSHEEQRSLLEEIVELLPGKKCVTSTKFLLR 307

Query: 120 LLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFV 179
           LLRT+ +++     +E LEKRI  QLD+A+L++L+IP+  ++  TL D + V R++  F+
Sbjct: 308 LLRTSMVLHASQVTQETLEKRIGMQLDEAALEDLLIPNMKYSGETLYDTDSVQRILDHFM 367

Query: 180 -----HLDIEGAKSG-----AALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHAR 229
                 +  E    G      ++ KVA L+D YLAE A D NL LS+F AL   +P   R
Sbjct: 368 LTFDSSIVEEKQMMGDSHPLKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVR 427

Query: 230 ATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVL 289
             DDG+YRAID Y+KAHP +T+ ER+ LC L++ +KLS EA  HAAQN+RLP+R ++QVL
Sbjct: 428 PMDDGIYRAIDIYIKAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVL 487

Query: 290 FSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQ 349
           F EQ +L   +  +G   G    N   D S A  L   +     M +  +RE V  L+ +
Sbjct: 488 FFEQMRLRTSI--AGWLFGSEENN---DTSGA--LEGNKNTNANMVMHGMRERVFELEKE 540

Query: 350 CNAMQVQIEKLVEKKKGTFFRWKKLG 375
           C +M+  ++KLV+ K+G  F  K  G
Sbjct: 541 CMSMKQDLDKLVKTKEGRNFFSKIFG 566

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FKB6|Y5880_ARATH BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1

 Score =  209 bits (532), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 205/386 (53%), Gaps = 63/386 (16%)

Query: 24  WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEES 83
           W +D  +L +D + + ++ +K +GVRP+ IG+ +  YA             + LT   E 
Sbjct: 221 WIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYA------------ERELTKRSEH 268

Query: 84  PESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISW 143
            +++          VET+V +LP E   +P +F   LLR A +++   + R +LE+R+  
Sbjct: 269 EQTI----------VETIVTLLPVENLVVPISFLFGLLRRAVILDTSVSCRLDLERRLGS 318

Query: 144 QLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKF--------------VHLDIEGAKSG 189
           QLD A+L +L+IPSF H   TL D++ V R++  F                 D   + S 
Sbjct: 319 QLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNFSQQGGDDSEDEESVFECDSPHSPSQ 378

Query: 190 AALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEV 249
            A+ KVAKLVD YLAE A D+NL LS+F+ +A ALP HAR   DGLYRAID YLKAH  +
Sbjct: 379 TAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHARTLHDGLYRAIDLYLKAHQGL 438

Query: 250 TKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL--------- 300
           +  ++K L +LID +KLS EA  HAAQN+RLP+++++QVL+ EQ KL   L         
Sbjct: 439 SDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLKLRSSLCSSYSDEEP 498

Query: 301 --------DW---SGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQ 349
                    W   SG+ S   SP   +         +RE    ++E+ +LR  +  L+ +
Sbjct: 499 KPKQQQQQSWRINSGALSATMSPKDNYAS------LRRENRELKLELARLRMRLNDLEKE 552

Query: 350 CNAMQVQIEKLVEKKKGTFFRWKKLG 375
              M+  +++   +K  + F  KK+G
Sbjct: 553 HICMKRDMQRSHSRKFMSSFS-KKMG 577

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C9Z0|Y3866_ARATH Putative BTB/POZ domain-containing protein At3g08660 OS=Arabidopsis thaliana GN=At3g08660 PE=3 SV=1

 Score =  208 bits (530), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 205/377 (54%), Gaps = 43/377 (11%)

Query: 22  ECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFE 81
           E W ++   L +DY+V+ +S +    VR + I + + HYA   L         KG+    
Sbjct: 196 EMWTEELSALGIDYYVQVVSAMARLSVRSESIVASLVHYAKTSL---------KGI---- 242

Query: 82  ESPESVTASWMKKRFFVETLVGILP-PEKDS-----LPCNFFLRLLRTANMVNVEPAYRE 135
                +  +  ++R  VE +V +LP  EK S     +P  F   +L+   ++++E + R 
Sbjct: 243 -----IDRNCQEQRKIVEAMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGTIIDIEISCRL 297

Query: 136 ELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH----------LDIEG 185
           ELE+RI  QL+ ASL +L+IPS  +   ++ DV+ V R++  F+            D + 
Sbjct: 298 ELERRIGHQLETASLDDLLIPSVQNE-DSMYDVDTVHRILTFFLERIEEEDDECGYDSDS 356

Query: 186 AKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKA 245
               ++L+KV +++D YL E A D  LSL +F A+   LP H+R  DDG+YRAID YLKA
Sbjct: 357 TGQHSSLLKVGRIMDAYLVEIAPDPYLSLHKFTAIIETLPEHSRIVDDGIYRAIDMYLKA 416

Query: 246 HPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDW--- 302
           HP +T++ERK LC  ID +KLS EAS H AQNDRLPV+ V++VL++EQ +L K L     
Sbjct: 417 HPLLTEEERKKLCNFIDCKKLSQEASNHVAQNDRLPVQMVVRVLYTEQLRLKKALSGDSE 476

Query: 303 SGSF---SGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEK 359
            GS+   SG++S  +   P       +RE    ++EI ++R  V  L+ + N M+ ++ +
Sbjct: 477 EGSWVLPSGVQSRAVS--PRDTYAALRRENRELKLEISRMRVRVSELEKEHNLMKHEMME 534

Query: 360 LVEKKKGTFFRWKKLGI 376
                 GTF      GI
Sbjct: 535 KSGNNGGTFLTSLSKGI 551

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q66GP0|Y5738_ARATH BTB/POZ domain-containing protein At5g67385 OS=Arabidopsis thaliana GN=At5g67385 PE=2 SV=2

 Score =  205 bits (521), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 111/285 (38%), Positives = 172/285 (60%), Gaps = 16/285 (5%)

Query: 24  WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEES 83
           W +D  +L +D F + +  + A+G +   +G ++  YA K L  L  E   KG+   E  
Sbjct: 203 WAEDLTVLRIDSFQRVLIAMMARGFKQYGLGPVLMLYAQKSLRGL--EIFGKGMKKIEPK 260

Query: 84  PESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISW 143
            E       +KR  +ET+V +LP EK+++  +F   LLR A  +    A R +LE R+  
Sbjct: 261 QEH------EKRVILETIVSLLPREKNAMSVSFLSMLLRAAIFLETTVACRLDLENRMGL 314

Query: 144 QLDQASLKELMIPSFSHTCG-TLLDVELVSRLVKKFVHLDIEGAK---SGAALV----KV 195
           QL QA L +L+IPS+S T   ++ D + V R++  ++  ++EG +   +G  L     +V
Sbjct: 315 QLGQAVLDDLLIPSYSFTGDHSMFDTDTVQRILMNYLEFEVEGVRLSNNGVDLAGDMERV 374

Query: 196 AKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERK 255
            KL++ Y+AE A D N+SL +F+ LA  +P  +R T+DG+YRA+D YLKAHP ++  ERK
Sbjct: 375 GKLLENYMAEIASDRNVSLQKFIGLAELIPEQSRVTEDGMYRAVDIYLKAHPNMSDVERK 434

Query: 256 SLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL 300
            +C L+D +KLS EA  HAAQNDRLPV+ ++QVL+ EQ +L  ++
Sbjct: 435 KVCSLMDCQKLSREACAHAAQNDRLPVQTIVQVLYYEQQRLRGEV 479

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Arabidopsis thaliana (taxid: 3702)

>sp|Q682S0|RPT2_ARATH Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2

 Score =  203 bits (516), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 167/283 (59%), Gaps = 11/283 (3%)

Query: 24  WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEES 83
           W ++ CILD+D+F   +S +K +GV+P  + S I  Y  K L DL  + + +G+  + + 
Sbjct: 189 WTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDLVRDHSGRGV-KYSDP 247

Query: 84  PESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISW 143
            ++ +    ++R  V+++V +LP +K   P NF   LLR A  ++     + ELEKRIS 
Sbjct: 248 GDNESDERSQQRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTSLTCKNELEKRISV 307

Query: 144 QLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHL----------DIEGAKSGAALV 193
            L+  S+ +L+IPSF++    LLD++ V R++  FV            D        +L 
Sbjct: 308 VLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAFVEKEKNVGVFNGGDFNRGVCSVSLQ 367

Query: 194 KVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQE 253
           +VAK VD YLAE A   +L++S+F A+A  +P  AR +DD LYRAID +LKAHP + + E
Sbjct: 368 RVAKTVDSYLAEIATYGDLTISKFNAIANLVPKSARKSDDDLYRAIDIFLKAHPNLDEIE 427

Query: 254 RKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKL 296
           R+ +C  +D  KLS +A LHA+QN RLPV  V+  L+ +Q KL
Sbjct: 428 REKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYDQLKL 470

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Necessary for root phototropism. Involved in hypocotyl phototropism under high rate but not under low rate light. Regulates stomata opening. Seems to be not involved in chloroplast accumulation and translocation.

Arabidopsis thaliana (taxid: 3702)

>sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana GN=NPY2 PE=2 SV=1

 Score =  202 bits (515), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 193/364 (53%), Gaps = 60/364 (16%)

Query: 24  WFDDACILDMDYFVKTISGIKAKGV-RPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEE 82
           W +D C L++DY+ + I  IK K +   ++IG  +  Y  + L        NKG+     
Sbjct: 209 WVEDLCELEIDYYKRVIMNIKTKCILGGEVIGEALKAYGYRRLSGF-----NKGVME--- 260

Query: 83  SPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRIS 142
                    +K +  +ETLV +LP EK+S+ C F L+LL+   MVN     +E+L +RI 
Sbjct: 261 -----QGDLVKHKTIIETLVWLLPAEKNSVSCGFLLKLLKAVTMVNSGEVVKEQLVRRIG 315

Query: 143 WQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLD-------------------- 182
            QL++AS+ EL+I S   +  TL DV+LV ++V +F+  D                    
Sbjct: 316 QQLEEASMAELLIKSHQGS-ETLYDVDLVQKIVMEFMRRDKNSEIEVQDDEDGFEVQEVR 374

Query: 183 -IEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDT 241
            + G  S A+ + VAK++D YL E A D NL  S+F+ +A ++ S  R   D LYRAID 
Sbjct: 375 KLPGILSEASKLMVAKVIDSYLTEIAKDPNLPASKFIDVAESVTSIPRPAHDALYRAIDM 434

Query: 242 YLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAK------ 295
           +LK HP +TK E+K +C+L+D RKLS EA +HA QNDRLP+R V+QVLF EQ +      
Sbjct: 435 FLKEHPGITKGEKKRMCKLMDCRKLSVEACMHAVQNDRLPLRVVVQVLFFEQVRAAASSG 494

Query: 296 ---------LNKQLDWSGSFSGIRS-PNIGFDPSAARCLSKREVGAQQMEIRKLREEVLR 345
                    + ++L   G++   RS P +  D        + E  A + E+R L+ E+  
Sbjct: 495 SSTPDLPRGMGRELRSCGTYGSSRSVPTVMED--------EWEAVATEEEMRALKSEIAA 546

Query: 346 LQSQ 349
           L+ Q
Sbjct: 547 LKLQ 550

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). May play an essential role in auxin-mediated organogenesis and in root gravitropic responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	434
224143803	438	predicted protein [Populus trichocarpa]	0.974	0.965	0.751	0.0
255553023	428	signal transducer, putative [Ricinus com	0.972	0.985	0.764	0.0
224070861	409	predicted protein [Populus trichocarpa]	0.926	0.982	0.769	1e-177
356526175	445	PREDICTED: root phototropism protein 3-l	0.958	0.934	0.720	1e-170
356522363	423	PREDICTED: root phototropism protein 3-l	0.963	0.988	0.701	1e-166
225442789	433	PREDICTED: root phototropism protein 3 [	0.974	0.976	0.727	1e-164
356550582	419	PREDICTED: root phototropism protein 3-l	0.951	0.985	0.696	1e-164
255639699	419	unknown [Glycine max]	0.951	0.985	0.696	1e-164
357455089	423	BTB/POZ domain-containing protein [Medic	0.963	0.988	0.685	1e-159
224054160	340	predicted protein [Populus trichocarpa]	0.778	0.994	0.807	1e-159

>gi|224143803|ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|222871395|gb|EEF08526.1| predicted protein [Populus trichocarpa]

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/434 (75%), Positives = 377/434 (86%), Gaps = 11/434 (2%)

Query: 1   MKKLSSPDSVTFPG-KPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAH 59
           MK  S P+SV   G K +QF+AECWFDDACILDMDYF KT++GIKAKGVRPD IGSIIAH
Sbjct: 1   MKAASFPESVLSSGLKTSQFAAECWFDDACILDMDYFAKTLAGIKAKGVRPDFIGSIIAH 60

Query: 60  YASKWLPDLA--YEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFF 117
           YASKWLPDL+  +  +NKGL NFEESPESVTA WMKKRFFVETLVGILPPEKDS+PC+F 
Sbjct: 61  YASKWLPDLSGDHLSSNKGLANFEESPESVTALWMKKRFFVETLVGILPPEKDSIPCSFL 120

Query: 118 LRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKK 177
           LRLLR ANMV+VEPAYR ELEKRISWQLDQASLKE+MIPSFSHTCGTLLDVEL+ RLV+ 
Sbjct: 121 LRLLRIANMVSVEPAYRAELEKRISWQLDQASLKEIMIPSFSHTCGTLLDVELIIRLVRS 180

Query: 178 FVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYR 237
           FV+LD E AKSG+AL+KVAKLVD YLAEAA+D+NL+LSEF+ALAGALPSHARATDDGLYR
Sbjct: 181 FVNLD-EVAKSGSALIKVAKLVDSYLAEAAVDANLNLSEFIALAGALPSHARATDDGLYR 239

Query: 238 AIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLN 297
           A+DTYLKAHP + KQERK+L RLIDSRKLS EASLHAAQN+RLPVRAVIQVL+SEQ KLN
Sbjct: 240 AVDTYLKAHPGLPKQERKALFRLIDSRKLSQEASLHAAQNERLPVRAVIQVLYSEQTKLN 299

Query: 298 KQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQI 357
           +Q+DWSGSFSG RSP++GF+ + AR LSKRE   QQMEIRKLRE+VLRL+SQC  MQ+Q+
Sbjct: 300 RQIDWSGSFSGARSPSLGFE-APARLLSKRETSDQQMEIRKLREDVLRLESQCYVMQMQM 358

Query: 358 EKLVEKKKGTFFRWKKLGIIPSI--KSGSISVVDRIVEGDR--EGEAAFGRQTPIDLKTK 413
           E+++EKKKG FFRWKKLGI+P+    S ++S+V++I EG    EG+   G QTP+DLKTK
Sbjct: 359 ERMLEKKKG-FFRWKKLGIMPNSLRSSNNVSIVEKI-EGKNAGEGDVGSGIQTPVDLKTK 416

Query: 414 LVRGKNSNTPKHRQ 427
           LVRGK   +P+ R+
Sbjct: 417 LVRGKGKTSPRRRK 430

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553023|ref|XP_002517554.1| signal transducer, putative [Ricinus communis] gi|223543186|gb|EEF44718.1| signal transducer, putative [Ricinus communis]

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/437 (76%), Positives = 378/437 (86%), Gaps = 15/437 (3%)

Query: 1   MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHY 60
           MKK+S  DSVTFPGK ++F+ ECWFDDACIL+MDYFVKT++GIKAKGVRPDLIGSIIAHY
Sbjct: 1   MKKISLQDSVTFPGKTSEFAGECWFDDACILNMDYFVKTLAGIKAKGVRPDLIGSIIAHY 60

Query: 61  ASKWLPDLAYEDA--NKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFL 118
           ASKWLP+L+ +     +GLTNFEESPE VTASWMKKRFFVETLVG+LPPEKDS+PCNF L
Sbjct: 61  ASKWLPELSGDGTATERGLTNFEESPECVTASWMKKRFFVETLVGVLPPEKDSIPCNFLL 120

Query: 119 RLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKF 178
           RLLRTANMV VEP YR ELEKRISWQLDQASLKELMIPSFSHTCGTLLDVEL+ RLV++F
Sbjct: 121 RLLRTANMVGVEPTYRAELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELMIRLVRRF 180

Query: 179 VHLD--IEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLY 236
           V+LD   +    GAALVKVAKLVDCYLAEAA+D++LSLSEF  LA ALP HARA DDGLY
Sbjct: 181 VNLDEAAKSGGGGAALVKVAKLVDCYLAEAAVDASLSLSEFDDLASALPGHARANDDGLY 240

Query: 237 RAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKL 296
           RAIDTYLKAHP  +KQERK LCRLIDSRKLSPEASLHAAQN+RLPVRAVIQVL SEQ KL
Sbjct: 241 RAIDTYLKAHPAASKQERKMLCRLIDSRKLSPEASLHAAQNERLPVRAVIQVLISEQNKL 300

Query: 297 NKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQ 356
           N+Q+DWSGSFS  RSPN GFDP   RC SKRE+ AQQMEI+KLRE+VLRLQ QC+AMQ+Q
Sbjct: 301 NRQIDWSGSFS--RSPNPGFDP-PGRCYSKREMNAQQMEIKKLREDVLRLQGQCHAMQMQ 357

Query: 357 IEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVD-RIVEGDREGEAAFGRQTPIDLKTKLV 415
           +E++VEKKKG FFRWKK GII + KS ++SVVD +I EGD EGE  FGRQTP+D+KTKL+
Sbjct: 358 MERMVEKKKG-FFRWKKFGIISTFKS-TVSVVDQKIEEGDGEGEIGFGRQTPVDMKTKLM 415

Query: 416 RGKNSNTPKHRQWRKSL 432
           + +   TP   +WRKS+
Sbjct: 416 KRR---TPP--RWRKSM 427

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070861|ref|XP_002303269.1| predicted protein [Populus trichocarpa] gi|222840701|gb|EEE78248.1| predicted protein [Populus trichocarpa]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 318/413 (76%), Positives = 352/413 (85%), Gaps = 11/413 (2%)

Query: 24  WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLA---YEDANKGLTNF 80
           WFDDACILDMDYFVKT++GIKAKGVRPDLIGSIIAHYASKWLPDL+   +   +KG+ NF
Sbjct: 1   WFDDACILDMDYFVKTLAGIKAKGVRPDLIGSIIAHYASKWLPDLSDGHHPSTDKGIANF 60

Query: 81  EESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKR 140
            ESPESVT SWMKKRFFVETLVGILPPEKDS+PCNF LRLLR ANMV VEP YR ELEK 
Sbjct: 61  AESPESVTTSWMKKRFFVETLVGILPPEKDSIPCNFLLRLLRIANMVGVEPTYRAELEKM 120

Query: 141 ISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVD 200
           ISWQLDQASLKELMIPSFSHTCGTLLDVEL+ RLV +FV+LD E AKS AAL+KVAKLVD
Sbjct: 121 ISWQLDQASLKELMIPSFSHTCGTLLDVELIIRLVGRFVNLD-EVAKSDAALIKVAKLVD 179

Query: 201 CYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRL 260
            YLAEAA+DSNL+L+EFVALAGALPSH+RATDDGLYRAIDTYLKAHP V+K ERK L RL
Sbjct: 180 SYLAEAAVDSNLNLAEFVALAGALPSHSRATDDGLYRAIDTYLKAHPGVSKHERKVLFRL 239

Query: 261 IDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSA 320
           IDSRKLS EASLHAAQN+RLPVRAVIQVLFSE  KLN+Q+DWSGSFSG RSP IG + + 
Sbjct: 240 IDSRKLSQEASLHAAQNERLPVRAVIQVLFSEHTKLNRQMDWSGSFSGTRSPYIGLE-AP 298

Query: 321 ARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWKKLG-IIPS 379
           ARCLSKRE+  QQ E+RKLRE+V RLQSQC AMQ Q+E+  EKKKG FFRWKKLG ++PS
Sbjct: 299 ARCLSKREMSVQQTEVRKLREDVHRLQSQCYAMQAQMERSWEKKKG-FFRWKKLGNVMPS 357

Query: 380 IKSGSISVVDRIVEGDR-EGEAAFGRQTPIDLKTKLVRGKNSNTPKHRQWRKS 431
           +KS + SVV++I E +  EGE   G QTP+DLKTKLVRGKN        WRKS
Sbjct: 358 MKSNNFSVVEKIEESNEGEGEVGCGIQTPVDLKTKLVRGKNKAP---LMWRKS 407

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526175|ref|XP_003531695.1| PREDICTED: root phototropism protein 3-like [Glycine max]

 Score =  602 bits (1553), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 314/436 (72%), Positives = 356/436 (81%), Gaps = 20/436 (4%)

Query: 1   MKKLSSPDSVTFPGK-PTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAH 59
           MKK S P+S+TF  K P+QFS+ECWFDDACILDMDYFVKT+SGIKAKGVR DLIGSII H
Sbjct: 25  MKKQSYPESLTFQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITH 84

Query: 60  YASKWLPDLAYED-ANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFL 118
           YASKWLPDL+  D A +GLT FEESPESVTASWMKKRFFVETLVG+LPPEKD++PCNF L
Sbjct: 85  YASKWLPDLSAGDMAERGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLL 144

Query: 119 RLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKF 178
           RLLRTANMV VE  YR+ELEKRISWQLDQASLKEL+IPSFSHTCGTLLDVELV RLVK+F
Sbjct: 145 RLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKRF 204

Query: 179 VHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRA 238
           V LD EGAKSGA+LVKVAKLVD YLAEAA+D+NLSL++F  LA ALPSHARATDDGLYRA
Sbjct: 205 VSLDSEGAKSGASLVKVAKLVDSYLAEAAVDANLSLNDFFTLAAALPSHARATDDGLYRA 264

Query: 239 IDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNK 298
           IDTYLKAH  V+KQERK LCRLIDSRKL+PEASLHAAQN+R PVRAVIQVL SEQ+KLN+
Sbjct: 265 IDTYLKAHSGVSKQERKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQSKLNR 324

Query: 299 QLDWSGSF-SGIRSPNIGFD-PSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQ 356
            +DWSGS  SG RSP  G D P+  RCLSKRE  AQQ+EI++L+E+V RLQSQC+AM  Q
Sbjct: 325 HVDWSGSLVSGTRSPG-GLDLPT--RCLSKREANAQQLEIKRLKEDVYRLQSQCSAMHAQ 381

Query: 357 IEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGDREGEAAFGRQTPIDLKTKLVR 416
           +E++VEKKKG               +   S  D++ E + EG    G  TP DLKT+LV 
Sbjct: 382 MERMVEKKKGF--------FKWKKFAFGKSEHDKM-EQELEGN---GMYTPADLKTRLVN 429

Query: 417 GKNSNTPKHRQWRKSL 432
            K S+   H+ WRKS+
Sbjct: 430 AKGSSKNTHK-WRKSM 444

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522363|ref|XP_003529816.1| PREDICTED: root phototropism protein 3-like [Glycine max]

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/436 (70%), Positives = 349/436 (80%), Gaps = 18/436 (4%)

Query: 1   MKKLSSPDSVTFPGK-PTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAH 59
           MKK S P+S+    K P+QFS+ECWFDDACILDMDYFVKT+SGIKAKGVR DLIG II H
Sbjct: 1   MKKQSCPESLILQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGFIITH 60

Query: 60  YASKWLPDLAYED-ANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFL 118
           YASKWLPDL+  D A KGLT FEESPESVTASWMKKRFFVETLVG+LPPEKD++PCNF L
Sbjct: 61  YASKWLPDLSAGDMAEKGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLL 120

Query: 119 RLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKF 178
           RLLRTANMV VE  YR+ELEKRISWQLDQASLKEL+IPSFSHTCGTLLDVELV RLVK+F
Sbjct: 121 RLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKRF 180

Query: 179 VHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRA 238
           V LD EGAKS A+LVKVAKLVD YLAEAA+D+NLS ++FV LA ALPSHARATDDGLYRA
Sbjct: 181 VSLDSEGAKSVASLVKVAKLVDSYLAEAAVDANLSFNDFVTLAAALPSHARATDDGLYRA 240

Query: 239 IDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNK 298
           IDTYLKAHP V+KQERK LCRLIDSRKL+ EASLHAAQN+R PVRAVIQVL SEQ+KLN+
Sbjct: 241 IDTYLKAHPGVSKQERKGLCRLIDSRKLTAEASLHAAQNERFPVRAVIQVLLSEQSKLNR 300

Query: 299 QLDWSGSFSGI-RSPNIGFD-PSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQ 356
            +DWSGS   + RSP  G D P+  RCLSKREV AQQ+EIR+L+E+V RLQS CNAMQ Q
Sbjct: 301 HVDWSGSLVSVTRSPG-GLDLPT--RCLSKREVNAQQLEIRRLKEDVYRLQSHCNAMQAQ 357

Query: 357 IEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGDREGEAAFGRQTPIDLKTKLVR 416
           +E++V +KK                +   S  D++ E + +G    G  TP DLKT+LV 
Sbjct: 358 MERMVVEKKKG-------FFKWKKFAFGKSEHDKM-EQELQGN---GMYTPADLKTRLVN 406

Query: 417 GKNSNTPKHRQWRKSL 432
            K ++     +WRKS+
Sbjct: 407 AKGTSKNNTHKWRKSM 422

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442789|ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Vitis vinifera] gi|297743368|emb|CBI36235.3| unnamed protein product [Vitis vinifera]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 321/441 (72%), Positives = 362/441 (82%), Gaps = 18/441 (4%)

Query: 1   MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHY 60
           MKKL+ P+S+T  GK   F+AECW DDACILDMDYFVKT+SGIKAKGVRPDLIGSIIAHY
Sbjct: 1   MKKLALPESITLAGKRPIFAAECWLDDACILDMDYFVKTLSGIKAKGVRPDLIGSIIAHY 60

Query: 61  ASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRL 120
           ASKWLP+L  +D  KGLT FEESPES T SWMKKRFFVETLVGILPPEKDS+PCNF LRL
Sbjct: 61  ASKWLPELLTDD-EKGLTIFEESPESATTSWMKKRFFVETLVGILPPEKDSIPCNFLLRL 119

Query: 121 LRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH 180
           LRTANMV VEP YR ELE RISWQLDQASLKELMIPSF HTC TLLDVELV RLVK+FV+
Sbjct: 120 LRTANMVGVEPTYRAELESRISWQLDQASLKELMIPSFCHTCATLLDVELVMRLVKRFVN 179

Query: 181 LDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAID 240
           +D   AKSGAAL+KVAKL+D YLAEAA+DSNL+L EF +LAGALPSHAR+TDDGLYRAID
Sbjct: 180 MD-AAAKSGAALIKVAKLIDSYLAEAAVDSNLTLQEFASLAGALPSHARSTDDGLYRAID 238

Query: 241 TYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL 300
           TYLKAHP V+KQ+RK LCR+IDSRKLSPEAS HAA N+RLPVRAVIQVL SEQ KL +QL
Sbjct: 239 TYLKAHPGVSKQDRKVLCRIIDSRKLSPEASFHAAHNERLPVRAVIQVLLSEQTKLTRQL 298

Query: 301 DWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKL 360
           DWSGSFSG RSP  G     +RC SKRE+ +QQ EIR+LREEV RLQ QC+AMQ QIE+L
Sbjct: 299 DWSGSFSGTRSPKPGVLEHPSRCPSKREISSQQTEIRRLREEVRRLQGQCSAMQGQIERL 358

Query: 361 VEKKKGTFFRWKKLGIIPSIKSGSI---SVVDRI---VEGDREGEAAFGRQTPIDL---K 411
           +EKKKG F    K  ++PS +S  +   S+ ++I    EG+ EGEAAFG+QTP+D    K
Sbjct: 359 LEKKKGLFK--WKKLVMPSFRSTGVDAGSIGEKIQEREEGEGEGEAAFGQQTPLDFKITK 416

Query: 412 TKLVRGKNSNTPKHRQWRKSL 432
           T+LVRGK   TP   +WR SL
Sbjct: 417 TRLVRGK---TPP--KWRNSL 432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550582|ref|XP_003543664.1| PREDICTED: root phototropism protein 3-like [Glycine max]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/435 (69%), Positives = 345/435 (79%), Gaps = 22/435 (5%)

Query: 1   MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHY 60
           MKK    +S T  G     S ECWFDDACI+DMDYFVKT+S IK KGVR DLIGSII HY
Sbjct: 3   MKKPCCEESETIVG-----SWECWFDDACIVDMDYFVKTLSSIKQKGVRADLIGSIITHY 57

Query: 61  ASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRL 120
           AS WLPDL+   A  G+T   +SPESVT SWMKKRFFVETLV +LPPEKDS+PCNF LRL
Sbjct: 58  ASIWLPDLS-SSAENGVTTHFQSPESVTNSWMKKRFFVETLVSVLPPEKDSVPCNFLLRL 116

Query: 121 LRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH 180
           LRTANMV V+  YR ELE RISWQLDQASLKELMIPSFSHTCGTLLDVELV RLVK+F+ 
Sbjct: 117 LRTANMVRVDATYRGELENRISWQLDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFMS 176

Query: 181 LDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAID 240
           LD    + GAALVKVAKLVDCYLAEAA+D+NL+LSEF+ALAGALPSH+RATDDGLYRAID
Sbjct: 177 LD----RDGAALVKVAKLVDCYLAEAAVDANLTLSEFIALAGALPSHSRATDDGLYRAID 232

Query: 241 TYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL 300
           TYLKAHP+V+KQERK LCRL+DSRKL+ EASLHAAQN+RLPVRAVIQVLFSEQ KLN+ +
Sbjct: 233 TYLKAHPDVSKQERKGLCRLLDSRKLTTEASLHAAQNERLPVRAVIQVLFSEQTKLNRHI 292

Query: 301 DWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKL 360
           DWSGSFS +RSPN G DP   RCLSKRE  AQQMEIRKL+E+V RLQSQ NAMQ Q+E++
Sbjct: 293 DWSGSFSSLRSPNGGLDP-PGRCLSKRETNAQQMEIRKLKEDVYRLQSQFNAMQGQMERM 351

Query: 361 VEKKKGTFFRWKKLGIIPSIKSG---SISVVDRIVEGDREGEAAFGRQTPIDLKTKLVRG 417
             KKKG  F+W+K G +P+          + +   E + E E  FGRQTP+D+KT LV+ 
Sbjct: 352 AAKKKG-LFKWRKFG-MPTFSRNVGEVEKIEEEEEEEEAEREVGFGRQTPMDMKTSLVK- 408

Query: 418 KNSNTPKHRQWRKSL 432
               TP   +WRKS+
Sbjct: 409 ---RTP--HKWRKSM 418

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639699|gb|ACU20143.1| unknown [Glycine max]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/435 (69%), Positives = 345/435 (79%), Gaps = 22/435 (5%)

Query: 1   MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHY 60
           MKK    +S T  G     S ECWFDDACI+DMDYFVKT+S IK KGVR DLIGSII HY
Sbjct: 3   MKKPCCEESETIVG-----SWECWFDDACIVDMDYFVKTLSSIKQKGVRADLIGSIITHY 57

Query: 61  ASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRL 120
           AS WLPDL+   A  G+T   +SPESVT SWMKKRFFVETLV +LPPEKDS+PCNF LRL
Sbjct: 58  ASIWLPDLS-SSAENGVTTHFQSPESVTNSWMKKRFFVETLVSVLPPEKDSVPCNFLLRL 116

Query: 121 LRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH 180
           LRTANMV V+  YR ELE RISWQLDQASLKELMIPSFSHTCGTLLDVELV RLVK+F+ 
Sbjct: 117 LRTANMVRVDATYRGELENRISWQLDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFMS 176

Query: 181 LDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAID 240
           LD    + GAALVKVAKLVDCYLAEAA+D+NL+LSEF+ALAGALPSH+RATDDGLYRAID
Sbjct: 177 LD----RDGAALVKVAKLVDCYLAEAAVDANLTLSEFIALAGALPSHSRATDDGLYRAID 232

Query: 241 TYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL 300
           TYLKAHP+V+KQERK LCRL+DSRKL+ EASLHAAQN+RLPVRAVIQVLFSEQ KLN+ +
Sbjct: 233 TYLKAHPDVSKQERKGLCRLLDSRKLTTEASLHAAQNERLPVRAVIQVLFSEQTKLNRHI 292

Query: 301 DWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKL 360
           DWSGSFS +RSPN G DP   RCLSKRE  AQQMEIRKL+E+V RLQSQ NAMQ Q+E++
Sbjct: 293 DWSGSFSSLRSPNGGLDP-PGRCLSKRETNAQQMEIRKLKEDVYRLQSQFNAMQGQMERM 351

Query: 361 VEKKKGTFFRWKKLGIIPSIKSG---SISVVDRIVEGDREGEAAFGRQTPIDLKTKLVRG 417
             KKKG  F+W+K G +P+          + +   E + E E  FGRQTP+D+KT LV+ 
Sbjct: 352 AAKKKG-LFKWRKFG-MPTFSRNVGEVEKIEEEEGEEEAEREVGFGRQTPMDMKTSLVK- 408

Query: 418 KNSNTPKHRQWRKSL 432
               TP   +WRKS+
Sbjct: 409 ---RTP--HKWRKSM 418

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357455089|ref|XP_003597825.1| BTB/POZ domain-containing protein [Medicago truncatula] gi|355486873|gb|AES68076.1| BTB/POZ domain-containing protein [Medicago truncatula]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/436 (68%), Positives = 342/436 (78%), Gaps = 18/436 (4%)

Query: 1   MKKLSSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHY 60
           MKK    +  T P +       CWF+DACILDMD F+KT+S IK KGVR DLIGSII HY
Sbjct: 1   MKKQCFTEPETSPNQQVTLEYCCWFEDACILDMDCFIKTLSNIKQKGVRSDLIGSIITHY 60

Query: 61  ASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRL 120
           ASKWLPDL  E +N        SPESVT SWMKKRFFVETLV +LPP+KDS+PCNF LRL
Sbjct: 61  ASKWLPDL--ESSNSNSNANANSPESVTTSWMKKRFFVETLVSVLPPDKDSIPCNFLLRL 118

Query: 121 LRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH 180
           L+TANMV VE  YR +LE RISWQLDQASLKELMIPSFSHTCGTLLDVELV RLVK+F+ 
Sbjct: 119 LKTANMVLVESTYRTDLENRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFIS 178

Query: 181 LDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAID 240
           LD +G K+GAALVKVAKLVDCYLAEA +D+NLSLS+FVALAGALP+HARATDDGLYRAID
Sbjct: 179 LDHDGVKTGAALVKVAKLVDCYLAEAGLDANLSLSQFVALAGALPNHARATDDGLYRAID 238

Query: 241 TYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL 300
           TYLKAHP V+KQERKSLCRLIDSRKL+PEASLHAAQN+RLPVRAVIQVLFSEQ KLN+ +
Sbjct: 239 TYLKAHPSVSKQERKSLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHV 298

Query: 301 DWSGSFSGIRSPNIGF----DPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQ 356
           DWS SFS +RSP+ G+    DP  ARCLSKRE+  QQMEI+KL+E+V RLQSQCN MQ Q
Sbjct: 299 DWSASFSSLRSPS-GYGGVLDPQ-ARCLSKREMNTQQMEIKKLKEDVYRLQSQCNVMQAQ 356

Query: 357 IEKLVEKKKGTFFRWKKLGIIPSIKSGSISVVDRIVEGDREGEAAFGRQTPIDLKTKLVR 416
           ++K+ EKKK  F   KKL       S SI  ++ + + + E E  FGRQTP+D+KT  V 
Sbjct: 357 MDKMAEKKKSFFKW-KKLAF-----SKSIGEMENVEQDEAETEFGFGRQTPMDMKTSTV- 409

Query: 417 GKNSNTPKHRQWRKSL 432
              S TP   +WRKS+
Sbjct: 410 -VKSRTP--HKWRKSM 422

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054160|ref|XP_002298121.1| predicted protein [Populus trichocarpa] gi|222845379|gb|EEE82926.1| predicted protein [Populus trichocarpa]

 Score =  566 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/342 (80%), Positives = 312/342 (91%), Gaps = 4/342 (1%)

Query: 26  DDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLA--YEDANKGLTNFEES 83
           DDACILDMDYF KT++GIKAKGVRPD IGSIIAHYASKWLPDL+  +  +NKGL NFEES
Sbjct: 1   DDACILDMDYFAKTLAGIKAKGVRPDFIGSIIAHYASKWLPDLSGDHLSSNKGLANFEES 60

Query: 84  PESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISW 143
           PESVTA WMKKRFFVETLVGILPPEKDS+PC+F LRLLR ANMV+VEPAYR ELEKRISW
Sbjct: 61  PESVTALWMKKRFFVETLVGILPPEKDSIPCSFLLRLLRIANMVSVEPAYRAELEKRISW 120

Query: 144 QLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYL 203
           QLDQASLKE+MIPSFSHTCGTLLDVEL+ RLV+ FV+LD E AKSG+AL+KVAKLVD YL
Sbjct: 121 QLDQASLKEIMIPSFSHTCGTLLDVELIIRLVRSFVNLD-EVAKSGSALIKVAKLVDSYL 179

Query: 204 AEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDS 263
           AEAA+D+NL+LSEF+ALAGALPSHARATDDGLYRA+DTYLKAHP + KQERK+L RLIDS
Sbjct: 180 AEAAVDANLNLSEFIALAGALPSHARATDDGLYRAVDTYLKAHPGLPKQERKALFRLIDS 239

Query: 264 RKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWSGSFSGIRSPNIGFDPSAARC 323
           RKLS EASLHAAQN+RLPVRAVIQVL+SEQ KLN+Q+DWSGSFSG RSP++GF+ + AR 
Sbjct: 240 RKLSQEASLHAAQNERLPVRAVIQVLYSEQTKLNRQIDWSGSFSGARSPSLGFE-APARL 298

Query: 324 LSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKK 365
           LSKRE   QQMEIRKLRE+VLRL+SQC  MQ+Q+E+++EKKK
Sbjct: 299 LSKRETSDQQMEIRKLREDVLRLESQCYVMQMQMERMLEKKK 340

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	434
TAIR|locus:2092555	452	AT3G15570 [Arabidopsis thalian	0.981	0.942	0.612	1.5e-129
TAIR|locus:2011551	454	AT1G52770 [Arabidopsis thalian	0.979	0.936	0.595	6.8e-127
TAIR|locus:2173418	746	NPH3 "NON-PHOTOTROPIC HYPOCOTY	0.267	0.155	0.586	1.9e-66
TAIR|locus:2143558	592	AT5G03250 [Arabidopsis thalian	0.410	0.300	0.446	1.8e-56
TAIR|locus:2028160	665	AT1G30440 [Arabidopsis thalian	0.423	0.276	0.424	2.8e-55
TAIR|locus:2173204	591	AT5G13600 [Arabidopsis thalian	0.811	0.595	0.366	1.9e-53
TAIR|locus:2154920	668	AT5G66560 [Arabidopsis thalian	0.769	0.5	0.368	1.4e-50
TAIR|locus:504954965	604	AT5G67385 [Arabidopsis thalian	0.794	0.571	0.353	9.5e-50
TAIR|locus:2007564	634	AT1G03010 [Arabidopsis thalian	0.428	0.293	0.419	9.8e-50
TAIR|locus:2077868	582	AT3G08660 [Arabidopsis thalian	0.751	0.560	0.357	8.5e-49

TAIR|locus:2092555 AT3G15570 [Arabidopsis thaliana (taxid:3702)]

 Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
 Identities = 280/457 (61%), Positives = 328/457 (71%)

Query:     1 MKKLSSPDSVTFPGKPTQ-FSAEC----WFDDACILDMDYFVKTISGIKAKGVRPDLIGS 55
             MKK  SP+ VT  G   + F  +     +FD++CI DM+YFVKTI+GIK+KG+RPDLIGS
Sbjct:     1 MKKTLSPEPVTIYGNRQETFVGDMEYYTYFDESCIQDMNYFVKTITGIKSKGIRPDLIGS 60

Query:    56 IIAHYASKWLPDLAYE-DANKGLTNFEES-------PESVTASWMKKRFFVETLVGILPP 107
             IIAHYASKWLPDL+    A    T+ E         PESVTAS MKKRFFVETL+GILPP
Sbjct:    61 IIAHYASKWLPDLSGNVSAIISSTSLESKNNHNDTQPESVTASVMKKRFFVETLIGILPP 120

Query:   108 EKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLD 167
             EKDS+PCNF LRLLRTA MV   P Y  ELE R+SWQLDQASLKELMIPSFS+T GTLLD
Sbjct:   121 EKDSVPCNFLLRLLRTAKMVGANPNYLTELETRVSWQLDQASLKELMIPSFSYTSGTLLD 180

Query:   168 VELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSH 227
             +ELV+RLV KF  LD EG K+ AALVKVAKLVD YLAEAA+D  L+L EF++L  ALPSH
Sbjct:   181 IELVTRLVNKFSGLDSEGVKTAAALVKVAKLVDSYLAEAAVDGGLALPEFISLITALPSH 240

Query:   228 ARATDDGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQ 287
             AR T+DGLYRAIDTYLKAHP+V KQERK LCRLIDSRKLSPEA+LHAAQNDRLPVRA+I 
Sbjct:   241 ARTTEDGLYRAIDTYLKAHPQVLKQERKELCRLIDSRKLSPEAALHAAQNDRLPVRAIIG 300

Query:   288 VLFSEQAKLNKQLDWSGSF--SGIRSPNIGFDP------SAARCLSKREVGAQQMEIRKL 339
             VLF+EQ KL++ +D + S   S  RSP            SAARCLSKRE+  QQ EIR+L
Sbjct:   301 VLFTEQTKLSRHIDCNSSSISSTTRSPTNASGSHYLEGGSAARCLSKREMNVQQAEIRRL 360

Query:   340 REEVLRLQSQCNAMQVQIEKLVEKKK--GT--FFRWXXXXXXXXXXXXXXXVVDRIVEGD 395
             RE+V+RLQSQC AM  Q+E+L+EKK   G+  FFRW                      GD
Sbjct:   361 REDVVRLQSQCGAMHFQLERLMEKKSSGGSKGFFRWKRLGLVPSIRGSVSVEKGEEESGD 420

Query:   396 REGEAAFGRQTPIDLKTKLVRGKNSNTPKHRQWRKSL 432
               GE  F  +TP ++KT+LV+G+   TP   +WRKS+
Sbjct:   421 N-GEG-FEPRTPGNMKTRLVKGRT--TPS--RWRKSM 451

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

TAIR|locus:2011551 AT1G52770 [Arabidopsis thaliana (taxid:3702)]

 Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
 Identities = 274/460 (59%), Positives = 321/460 (69%)

Query:     1 MKKLSSPDSVTFPGKPTQFSA---EC-WFDDACILDMDYFVKTISGIKAKGVRPDLIGSI 56
             M K SSP+S T   K    S    EC WFDD CIL +DYFVKTI+GIK+KGVRPDLIGSI
Sbjct:     1 MDKTSSPESATISTKSPSTSTGKMECSWFDDGCILGIDYFVKTIAGIKSKGVRPDLIGSI 60

Query:    57 IAHYASKWLPDLA----YEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSL 112
             I HYAS+WLPDL+      D  +     +    SVTA  MKKR FVETL+GI+PPE+DS+
Sbjct:    61 IVHYASQWLPDLSDIVLNSDDQQPQPQQQSESFSVTAFVMKKRSFVETLIGIIPPERDSV 120

Query:   113 PCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVS 172
             PC+F LRLLRTANMV  +  Y+ ELE RISWQLDQASLKELMIPSFSHTCGTLLDVEL++
Sbjct:   121 PCDFLLRLLRTANMVGADANYKAELEARISWQLDQASLKELMIPSFSHTCGTLLDVELMT 180

Query:   173 RLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATD 232
             RLVKKF  LD EG KSGA+L+KVAKLVD YLAEAA+D +L+LSEF++L  ALP+HAR T+
Sbjct:   181 RLVKKFAGLDNEGVKSGASLIKVAKLVDSYLAEAALDGDLTLSEFISLVEALPNHARVTE 240

Query:   233 DGLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSE 292
             DGLYRAIDTYLKAHP VTKQERK LC LIDS KLS EASLHAAQNDRLPVR +IQVLFSE
Sbjct:   241 DGLYRAIDTYLKAHPNVTKQERKRLCGLIDSNKLSMEASLHAAQNDRLPVRTIIQVLFSE 300

Query:   293 QAKLNKQ----LDWSGS-FSGIRS-PNIG----FDPSAARCLSKREVGAQQMEIRKLREE 342
             QAKL+ +    ++WSGS FSG+RS PN       D   ARC SKRE+  QQ EIR+LRE+
Sbjct:   301 QAKLSHRSHNNIEWSGSSFSGVRSSPNPSGSHYSDSGPARCTSKREINVQQAEIRRLRED 360

Query:   343 VLRLQSQCNAMQVQIEKLVEKKKGT-------FFRWXXXXXXXXXXXXXXXVVDRIVEGD 395
             + +L+ +C AMQ Q+ KLVEKK GT       FFRW               VV+    G+
Sbjct:   361 MAKLKCECEAMQTQLHKLVEKK-GTCTSGNKGFFRWKKLGFRSGLSVS---VVEN-TNGE 415

Query:   396 REGEAAFGRQTPIDLKTK---LVRGKNSNTPKHRQWRKSL 432
               G    G       +T    + +     TP   +WRKS+
Sbjct:   416 EFGNNGEGENFEYVTQTPGNMMTKLVKGRTPS--RWRKSM 453

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2173418 NPH3 "NON-PHOTOTROPIC HYPOCOTYL 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
 Identities = 68/116 (58%), Positives = 88/116 (75%)

Query:   185 GAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLK 244
             G  +  A ++VA+LVD YL E A D NL L++F  LA ALP  AR  DDGLYRAID+YLK
Sbjct:   495 GGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPESARTCDDGLYRAIDSYLK 554

Query:   245 AHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL 300
             AHP +++ ERK LCR++D +KLS +A +HAAQN+RLP+R V+QVLFSEQ K++  L
Sbjct:   555 AHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVVQVLFSEQVKISNAL 610

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA;NAS

GO:0009416 "response to light stimulus" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0009785 "blue light signaling pathway" evidence=IGI;IPI

GO:0016567 "protein ubiquitination" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0009638 "phototropism" evidence=IMP

TAIR|locus:2143558 AT5G03250 [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
 Identities = 83/186 (44%), Positives = 113/186 (60%)

Query:   180 HLDIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAI 239
             HL  +GA        VA LVD YLAE A D NL L++F A+A A+P +AR  DDG+Y AI
Sbjct:   387 HLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYARPLDDGVYHAI 446

Query:   240 DTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQ 299
             D YLKAHP +T  ER+ +CRL++ +KLS EAS HAAQN+RLP+R ++QVLF EQ +L   
Sbjct:   447 DVYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLRLRTS 506

Query:   300 LDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEK 359
             +  SG F    S N+  +P      +    G  +     +RE V  L+ +C  M+ ++ K
Sbjct:   507 V--SGWF--FVSENLD-NPDNQHGANG---GLLKPRGENVRERVSELEKECMNMKQELHK 558

Query:   360 LVEKKK 365
             LV  K+
Sbjct:   559 LVRTKR 564

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2028160 AT1G30440 [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
 Identities = 84/198 (42%), Positives = 116/198 (58%)

Query:   183 IEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTY 242
             I   +S   +  VAKL+D YLAE A D NL L +F ALA ++P +AR  DDGLYRAID Y
Sbjct:   396 IGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPEYARLLDDGLYRAIDIY 455

Query:   243 LKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQL-- 300
             LK HP + + ER++LCRL+D +KLS EA  HAAQN+RLP+R ++QVLF EQ +L   +  
Sbjct:   456 LKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQLQLRTSVAG 515

Query:   301 ------DWSGSFSGIRS------PNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQS 348
                   +  G    +RS      PN G         + RE    ++ +  +R  V  L+ 
Sbjct:   516 CFLVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWATAVRENQVLKVGMDSMRMRVCELEK 575

Query:   349 QCNAMQVQIEKLVEKKKG 366
             +C+ M+ +IEKL +  KG
Sbjct:   576 ECSNMRQEIEKLGKTTKG 593

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2173204 AT5G13600 [Arabidopsis thaliana (taxid:3702)]

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 138/377 (36%), Positives = 216/377 (57%)

Query:     9 SVTFPGKPTQFSAE-CWFDD-ACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLP 66
             ++ + G  T+ ++E  WF+D +  LD+  + + I  ++++GV   +I + + HYA + LP
Sbjct:   194 TIYWNGIQTKATSENWWFNDVSSFLDLPMYKRFIKTVESRGVNAGIIAASVTHYAKRNLP 253

Query:    67 DLAYEDANKGLTNFEESP---ESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRT 123
              L    + K  +  EE     + +  S  ++R  +E +V +LP +K      F LRLLRT
Sbjct:   254 LLGC--SRKSGSPSEEGTNYGDDMYYSHEEQRSLLEEIVELLPGKKCVTSTKFLLRLLRT 311

Query:   124 ANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFV---- 179
             + +++     +E LEKRI  QLD+A+L++L+IP+  ++  TL D + V R++  F+    
Sbjct:   312 SMVLHASQVTQETLEKRIGMQLDEAALEDLLIPNMKYSGETLYDTDSVQRILDHFMLTFD 371

Query:   180 -HLDIEGAKSG-----AALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDD 233
               +  E    G      ++ KVA L+D YLAE A D NL LS+F AL   +P   R  DD
Sbjct:   372 SSIVEEKQMMGDSHPLKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDD 431

Query:   234 GLYRAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQ 293
             G+YRAID Y+KAHP +T+ ER+ LC L++ +KLS EA  HAAQN+RLP+R ++QVLF EQ
Sbjct:   432 GIYRAIDIYIKAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQ 491

Query:   294 AKLNKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAM 353
              +L   +  +G   G    N   D S A     +   A  M +  +RE V  L+ +C +M
Sbjct:   492 MRLRTSI--AGWLFGSEENN---DTSGA-LEGNKNTNAN-MVMHGMRERVFELEKECMSM 544

Query:   354 QVQIEKLVEKKKG-TFF 369
             +  ++KLV+ K+G  FF
Sbjct:   545 KQDLDKLVKTKEGRNFF 561

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2154920 AT5G66560 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
 Identities = 138/374 (36%), Positives = 214/374 (57%)

Query:    15 KPTQFS-AECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDA 73
             KP++ S  E WF+D   L +  F   I  +++  +  D+I S +  YA K +P +   + 
Sbjct:   246 KPSRDSNMELWFEDLTQLSLPIFKTVILSMRSGDLSSDIIESCLICYAKKHIPGILRSNR 305

Query:    74 NKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCN--FFLRLLRTANMVNVEP 131
                      S  S   S  ++R  +ET+   LP +K S+     F   LLRTA ++N   
Sbjct:   306 KP------PSSSSTAVSENEQRELLETITSNLPLDKSSISSTTRFLFGLLRTAIILNAAE 359

Query:   132 AYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH---------LD 182
               R+ LE++I  QL++A+L +L++PS+S+   TL DV+LV R++  F+          ++
Sbjct:   360 ICRDLLERKIGSQLERATLDDLLVPSYSYLNETLYDVDLVERILGHFLDTLEQSNTAIVE 419

Query:   183 IEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTY 242
             ++G KS  +L+ V KL+D +LAE A D+NL   +F  LA +LP  AR  DDGLYRA+D Y
Sbjct:   420 VDG-KS-PSLMLVGKLIDGFLAEIASDANLKSDKFYNLAISLPDQARLYDDGLYRAVDVY 477

Query:   243 LKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDW 302
             LKAHP V++ ER+ +C ++D +KL+ EA  HAAQN+RLP+RAV+QVLF EQ +L   +  
Sbjct:   478 LKAHPWVSEAEREKICGVMDCQKLTLEACTHAAQNERLPLRAVVQVLFFEQLQLRHAI-- 535

Query:   303 SGSFSGIRSPNIGFD----PSAA-RCLSKREV------GAQQMEIRK----LRE-EVLRL 346
             +G+    +SP+        PSAA R L+  E       G +Q++  K    +RE +VLRL
Sbjct:   536 AGTLLAAQSPSTSQSTEPRPSAAIRNLTITEEDGDEAEGERQVDAGKWKKTVRENQVLRL 595

Query:   347 QSQCNAMQVQIEKL 360
                 + M+ ++ +L
Sbjct:   596 DM--DTMRTRVHRL 607

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:504954965 AT5G67385 [Arabidopsis thaliana (taxid:3702)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 131/371 (35%), Positives = 207/371 (55%)

Query:     5 SSPDSVTFPGKPTQFSAECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKW 64
             S  + V    +  Q   + W +D  +L +D F + +  + A+G +   +G ++  YA K 
Sbjct:   184 SGNNEVVVQQQSKQPVVDWWAEDLTVLRIDSFQRVLIAMMARGFKQYGLGPVLMLYAQKS 243

Query:    65 LPDLAYEDANKGLTNFEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTA 124
             L  L  E   KG+   E   E       +KR  +ET+V +LP EK+++  +F   LLR A
Sbjct:   244 LRGL--EIFGKGMKKIEPKQEH------EKRVILETIVSLLPREKNAMSVSFLSMLLRAA 295

Query:   125 NMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCG-TLLDVELVSRLVKKFVHLDI 183
               +    A R +LE R+  QL QA L +L+IPS+S T   ++ D + V R++  ++  ++
Sbjct:   296 IFLETTVACRLDLENRMGLQLGQAVLDDLLIPSYSFTGDHSMFDTDTVQRILMNYLEFEV 355

Query:   184 EGAK---SGAALV----KVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLY 236
             EG +   +G  L     +V KL++ Y+AE A D N+SL +F+ LA  +P  +R T+DG+Y
Sbjct:   356 EGVRLSNNGVDLAGDMERVGKLLENYMAEIASDRNVSLQKFIGLAELIPEQSRVTEDGMY 415

Query:   237 RAIDTYLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKL 296
             RA+D YLKAHP ++  ERK +C L+D +KLS EA  HAAQNDRLPV+ ++QVL+ EQ +L
Sbjct:   416 RAVDIYLKAHPNMSDVERKKVCSLMDCQKLSREACAHAAQNDRLPVQTIVQVLYYEQQRL 475

Query:   297 NKQLDWSGSFSGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQ 356
               ++  + S S    P     P  A  L  + + +   E+ KL+ E   L+ +   M+++
Sbjct:   476 RGEVT-NDSDSPAPPP-----PQPAAVLPPK-LSSYTDELSKLKRENQDLKLELLKMKMK 528

Query:   357 I---EKLVEKK 364
             +   EK  EKK
Sbjct:   529 LKEFEKESEKK 539

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

TAIR|locus:2007564 AT1G03010 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
 Identities = 83/198 (41%), Positives = 121/198 (61%)

Query:   182 DIEGAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDT 241
             D  G+   ++++KV+KL+D YLAE AMD NL+ S+F+ALA  LP HAR   DGLYRA+D 
Sbjct:   390 DSPGSPKQSSILKVSKLMDNYLAEIAMDPNLTTSKFIALAELLPDHARIISDGLYRAVDI 449

Query:   242 YLKAHPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLD 301
             YLK HP +   ER  LC+ IDS+KLS EA  HAAQN+RLPV+  +QVL+ EQ +L   + 
Sbjct:   450 YLKVHPNIKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMS 509

Query:   302 WS-GSFSGIRSPNIGFDP------SAARCLSKREVGAQ-QMEIRKLREEVLRLQSQCNAM 353
              S G    + + N    P      + +  +S R+  A  + E R+L+ EV R++ +   +
Sbjct:   510 SSIGPTQFLFNSNCHQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDL 569

Query:   354 Q---VQI-EKLVEKKKGT 367
             +   + I ++LV+   GT
Sbjct:   570 EKDHISIKQELVKSNPGT 587

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2077868 AT3G08660 [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 132/369 (35%), Positives = 206/369 (55%)

Query:    22 ECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFE 81
             E W ++   L +DY+V+ +S +    VR + I + + HYA   L         KG+    
Sbjct:   196 EMWTEELSALGIDYYVQVVSAMARLSVRSESIVASLVHYAKTSL---------KGI---- 242

Query:    82 ESPESVTASWMKKRFFVETLVGILP-PEKDS-----LPCNFFLRLLRTANMVNVEPAYRE 135
                  +  +  ++R  VE +V +LP  EK S     +P  F   +L+   ++++E + R 
Sbjct:   243 -----IDRNCQEQRKIVEAMVNLLPNDEKGSYSLSIIPLGFLFGMLKVGTIIDIEISCRL 297

Query:   136 ELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH-LDIEGAKSG----- 189
             ELE+RI  QL+ ASL +L+IPS  +   ++ DV+ V R++  F+  ++ E  + G     
Sbjct:   298 ELERRIGHQLETASLDDLLIPSVQNE-DSMYDVDTVHRILTFFLERIEEEDDECGYDSDS 356

Query:   190 ----AALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKA 245
                 ++L+KV +++D YL E A D  LSL +F A+   LP H+R  DDG+YRAID YLKA
Sbjct:   357 TGQHSSLLKVGRIMDAYLVEIAPDPYLSLHKFTAIIETLPEHSRIVDDGIYRAIDMYLKA 416

Query:   246 HPEVTKQERKSLCRLIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLNKQLDWS-- 303
             HP +T++ERK LC  ID +KLS EAS H AQNDRLPV+ V++VL++EQ +L K L     
Sbjct:   417 HPLLTEEERKKLCNFIDCKKLSQEASNHVAQNDRLPVQMVVRVLYTEQLRLKKALSGDSE 476

Query:   304 -GSF---SGIRSPNIGFDPSAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEK 359
              GS+   SG++S  +   P       +RE    ++EI ++R  V  L+ + N M+ ++ +
Sbjct:   477 EGSWVLPSGVQSRAVS--PRDTYAALRRENRELKLEISRMRVRVSELEKEHNLMKHEMME 534

Query:   360 LVEKKKGTF 368
                   GTF
Sbjct:   535 KSGNNGGTF 543

GO:0004871 "signal transducer activity" evidence=IEA;ISS

GO:0009416 "response to light stimulus" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	434
pfam03000	249	pfam03000, NPH3, NPH3 family	5e-99

>gnl|CDD|217312 pfam03000, NPH3, NPH3 family

 Score =  295 bits (758), Expect = 5e-99
 Identities = 119/260 (45%), Positives = 166/260 (63%), Gaps = 22/260 (8%)

Query: 22  ECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFE 81
           + WF+D   L +D F + I+ +K++GV+P++IG  + HYA KWLP L+            
Sbjct: 2   DWWFEDLSELSIDLFKRVITAMKSRGVKPEVIGEALMHYAKKWLPGLS------------ 49

Query: 82  ESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRI 141
            S  S   S  ++R  +ET+V +LP EK S+ C+F  +LLR A ++    + REELE+RI
Sbjct: 50  RSGSSEEDSEEEQRALLETIVSLLPSEKGSVSCSFLFKLLRAAIILGASESCREELERRI 109

Query: 142 SWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHL----------DIEGAKSGAA 191
             QLDQA+L +L+IPS      TL DV+LV R+++ F+            D E + S ++
Sbjct: 110 GLQLDQATLDDLLIPSGYSGEETLYDVDLVQRILEVFLSRDAATQSSDDEDSEASPSSSS 169

Query: 192 LVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTK 251
           L+KVAKLVD YLAE A D NL LS+F+ALA A+P  AR + DGLYRAID YLKAHP +++
Sbjct: 170 LLKVAKLVDGYLAEIAPDPNLKLSKFIALAEAVPDSARPSHDGLYRAIDIYLKAHPNLSE 229

Query: 252 QERKSLCRLIDSRKLSPEAS 271
            E+K LCRL+D +KLS EA 
Sbjct: 230 SEKKRLCRLMDCQKLSQEAC 249

Phototropism of Arabidopsis thaliana seedlings in response to a blue light source is initiated by nonphototropic hypocotyl 1 (NPH1), a light-activated serine-threonine protein kinase. Mutations in NPH3 disrupt early signaling occurring downstream of the NPH1 photoreceptor. The NPH3 gene encodes a NPH1-interacting protein. NPH3 is a member of a large protein family, apparently specific to higher plants, and may function as an adapter or scaffold protein to bring together the enzymatic components of a NPH1-activated phosphorelay. Length = 249

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	434
PF03000	258	NPH3: NPH3 family; InterPro: IPR004249 The RPT2 pr	100.0

>PF03000 NPH3: NPH3 family; InterPro: IPR004249 The RPT2 protein is a signal transducer of the phototropic response in Arabidopsis thaliana

Probab=100.00  E-value=1.2e-94  Score=702.90  Aligned_cols=246  Identities=52%  Similarity=0.843  Sum_probs=223.8

Q ss_pred             CCChHHHhhccChhHHHHHHHHHHhCCCCchhHHHHHHHHHHhhCCCccccccccCCCCCCCCCcccchhhhhhHHHHHH
Q 013895           21 AECWFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKGLTNFEESPESVTASWMKKRFFVET  100 (434)
Q Consensus        21 ~dWW~eDl~~L~id~f~rvI~amkskg~~~~~I~~~L~~YA~kwLp~~~~~~~~~~~~~~~~~~~s~~~~~~~qR~llEt  100 (434)
                      +|||||||+.|++|+|+|||.||+++||+|++||++|+|||+||||++.+.....     .......+..+.+||.+|||
T Consensus         1 ~dWW~eDl~~L~id~f~rvi~a~~~~~~~~~~I~~~l~~Ya~k~l~~~~~~~~~~-----~~~~~~~~~~~~~~r~llEt   75 (258)
T PF03000_consen    1 KDWWFEDLSELSIDLFKRVISAMKSKGMKPEVIGEALMHYAKKWLPGLSRSSSGS-----SSSAESSTSSENEQRELLET   75 (258)
T ss_pred             CCccHHHHHhCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcccccccc-----cccccccchhHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999985432111     11122245567899999999


Q ss_pred             HHhhcCCCCCCccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhhcccCcccccccCCCCCCCccccHHHHHHHHHHHHh
Q 013895          101 LVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVH  180 (434)
Q Consensus       101 iV~lLP~ek~svsc~FLf~LLR~A~~l~as~~cr~~LEkRIg~QLdqAtLdDLLIPs~~~~~~tlYDVdlV~Ril~~Fl~  180 (434)
                      ||+|||.++++|||+|||+|||+|+++|+|++||.+||+|||.|||||||+|||||+.+...+|+||||+|+|||++||.
T Consensus        76 iV~lLP~e~~svsc~FL~~LLr~A~~l~as~~cr~~Le~rIg~qLd~AtldDLLIP~~~~~~~t~yDVd~V~riv~~Fl~  155 (258)
T PF03000_consen   76 IVSLLPPEKGSVSCSFLFRLLRAAIMLGASSACRNELERRIGSQLDQATLDDLLIPSSPSGEDTLYDVDLVQRIVEHFLS  155 (258)
T ss_pred             HHHhCCCCCCcccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhccHHHhcccCCCCcccchhhHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999933344599999999999999999


Q ss_pred             cccc------------CccchhHHHHHHHHHHhHHHHhcCCCCCChhHHHHHHhhcCCccccccchhHHHHHHHHHhCCC
Q 013895          181 LDIE------------GAKSGAALVKVAKLVDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPE  248 (434)
Q Consensus       181 ~~~~------------~~~~~~~l~kVakLvD~YLaEIA~D~nL~~sKF~~LAealPd~AR~~hDgLYRAIDiYLKaHp~  248 (434)
                      +++.            ...+..++.+||||||+||+|||+|+||+|+||++|||+||++||++|||||||||+|||+||+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEiA~D~~L~~~kF~~Lae~lP~~aR~~hD~LYrAID~YLk~Hp~  235 (258)
T PF03000_consen  156 QEEEAGEEEESESESGSSPSSSSLVKVAKLVDGYLAEIAPDPNLKPSKFVALAEALPDSARPSHDGLYRAIDIYLKAHPG  235 (258)
T ss_pred             cccccccccccccccccCCChHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHCCHhhhhccchHHHHHHHHHHHccc
Confidence            8421            1135689999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcHHhhhhhccccccCCCCHHHh
Q 013895          249 VTKQERKSLCRLIDSRKLSPEAS  271 (434)
Q Consensus       249 lse~Er~~lC~~ldc~KLS~eAc  271 (434)
                      ||++||++||++|||+|||+|||
T Consensus       236 ls~~Er~~lC~~ldc~KLS~EAC  258 (258)
T PF03000_consen  236 LSEEERKRLCRLLDCQKLSPEAC  258 (258)
T ss_pred             CCHHHHHHHHhhCCcccCCcccC
Confidence            99999999999999999999999

The RPT2 gene is light inducible; encodes a novel protein with putative phosphorylation sites, a nuclear localization signal, a BTB/POZ domain (IPR000210 from INTERPRO), and a coiled-coil domain. RPT2 belongs to a large gene family that includes the recently isolated NPH3 gene []. The NPH3 protein is a NPH1 photoreceptor-interacting protein that is essential for phototropism. Phototropism of A. thaliana seedlings in response to a blue light source is initiated by nonphototropic hypocotyl 1 (NPH1), a light-activated serine-threonine protein kinase []. NPH3 is a member of a large protein family, apparently specific to higher plants, and may function as an adapter or scaffold protein to bring together the enzymatic components of a NPH1-activated phosphorelay []. Many of the proteins in this group also contain the BTB/POZ domain (IPR000210 from INTERPRO) at the N-terminal.; GO: 0004871 signal transducer activity, 0009416 response to light stimulus

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	434
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 4e-07
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 105/324 (32%)

Query: 20  SAECW--FDDAC-ILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYEDANKG 76
           +A+ W  F+ +C IL     + T    + K V   L  +   H +         +  +  
Sbjct: 255 NAKAWNAFNLSCKIL-----LTT----RFKQVTDFLSAATTTHISL--------DHHSMT 297

Query: 77  LTNFEESPESVTASWMKKRFFVETLVGILPPE-KDSLPCNFFLRLLRTANMVNVEPAYRE 135
           LT  +E  +S+   +      ++     LP E   + P    L ++  A  +    A  +
Sbjct: 298 LTP-DEV-KSLLLKY------LDCRPQDLPREVLTTNP--RRLSII--AESIRDGLATWD 345

Query: 136 ELEKRISWQLD---QASLKEL-------------------MIPSFSHTCGTL------LD 167
             +     +L    ++SL  L                    IP+       +       D
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT--ILLSLIWFDVIKSD 403

Query: 168 VELV------SRLVKK-------FVH-LDIEGAKSGAALVKV-AKLVDCYLAEAAMDSNL 212
           V +V        LV+K        +  + +E          +   +VD Y      DS+ 
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD- 462

Query: 213 SLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQ-ERKSLCRLI--D----SRK 265
                      +P +     D  Y    +++  H +  +  ER +L R++  D     +K
Sbjct: 463 ---------DLIPPY----LDQ-Y--FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506

Query: 266 LSPEASLHAAQNDRLPVRAVIQVL 289
           +  +++   A N    +   +Q L
Sbjct: 507 IRHDST---AWNASGSILNTLQQL 527

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 9e-04
 Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 35/212 (16%)

Query: 91  WMK--KRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEKRISWQLDQA 148
           W+        ET++ +L      +  N+  R   ++N           ++  +   L   
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN----IKLRIHSIQAELRRLLKSK 241

Query: 149 SLKE-LMI----------PSFSHTCGTLL---DVELVSRL-VKKFVHLDIEGAKSG---- 189
             +  L++           +F+ +C  LL     ++   L      H+ ++         
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301

Query: 190 AALVKVAKLVDCY---LAEAAMDSN-LSLSEFVALAGALPSH----ARATDDGLYRAIDT 241
                + K +DC    L    + +N   LS          +          D L   I++
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361

Query: 242 YLKA-HPEVTKQERKSLCRLIDSRKLSPEASL 272
            L    P   ++    L     S  + P   L
Sbjct: 362 SLNVLEPAEYRKMFDRLSVFPPSAHI-PTILL 392

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	434
2yy0_A	53	C-MYC-binding protein; conserved hypothetical prot	86.58
3a2a_A	58	Voltage-gated hydrogen channel 1; voltage-gated pr	83.63
3vmx_A	48	Voltage-gated hydrogen channel 1; coiled-coil, ION	83.11

>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}

Probab=86.58  E-value=0.77  Score=34.49  Aligned_cols=34  Identities=9%  Similarity=0.316  Sum_probs=30.2

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013895          326 KREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEK  359 (434)
Q Consensus       326 ~re~~~l~~e~~~mr~rv~eLe~~c~~mq~~~ek  359 (434)
                      ..|...|+.|++.||.++.+|..++.+++.++++
T Consensus        18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~   51 (53)
T 2yy0_A           18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ   51 (53)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4678899999999999999999999999988764

>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}

Probab=83.63  E-value=1.9  Score=32.95  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=30.3

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013895          327 REVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVE  362 (434)
Q Consensus       327 re~~~l~~e~~~mr~rv~eLe~~c~~mq~~~ekl~~  362 (434)
                      +....|+.-+..+-.+|..||-+|+.|.++|+++.+
T Consensus        11 ~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~   46 (58)
T 3a2a_A           11 RQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK   46 (58)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344567777888999999999999999999999854

>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}

Probab=83.11  E-value=2.4  Score=31.47  Aligned_cols=34  Identities=18%  Similarity=0.261  Sum_probs=29.5

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013895          329 VGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVE  362 (434)
Q Consensus       329 ~~~l~~e~~~mr~rv~eLe~~c~~mq~~~ekl~~  362 (434)
                      ...|+.-++.+=.+|.+||..|..+.++|+++.+
T Consensus         6 l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~   39 (48)
T 3vmx_A            6 ILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK   39 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence            4467777889999999999999999999998843

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00