Citrus Sinensis ID: 013956

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
Protein Sequence
MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFILS
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHccEEEEccccccccccccccccccccHHHHHHHcccccEEcccccccccccccccEEcccccccHHHHHHHcHHHHHHcccEEEEEcccccccccccHHcHHHHHHccccccccHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHccccccccHHHHHHHHHHHHHcccccccccHHHHHcccccccHHHHHHHHHHHccccccEEEEEEcccccccccHHcHHHHccccHHcccccccccccccccccccHHHHEEEEccccEEEEcccccHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEccccccccccccccccccccHHccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHccccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHccccHHHHHHEEHHHHHHHcccHHHHHHHHHHHHHHHHccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHHHccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHccccccHccccHHHHHcccccHHHHHHHHHEEEccccEEEEcccccHHHHHHHHccEEEEEc
Coil and Loop (DISEMBL)
mafqrrrqhhnhqhrLRVVVPIISSVFSALLILFALLsflapspsdtdhlhhprrftstdnvdgptgvpvfrvqrdggkldrdiwssrnaqfyhgcsiasskfakagdvthsnRYLAIVTsgglnqqrtGIIDAVVAARILNATLvipkldqksfwkdasdfseifdvDRFISVLSKDVKIIkqiprkggksltpyhmrvprkcnekcyqnrvLPVLLKRHAVQLSKFDYRLANkldtdlqklrcrvnyhalsfTDSIQKMGEKLVHQMRMKGKHYIALHLrfepdmlafsgcyygggdkeRKELGAIRKRWKTlhisnpdkerrhgkcpltplEVGLMLRALGYGSDVHIYVASgevyggeetlaplkalfpnfysketiaskelepfssfssrMAALDfivcdesdifvtnnngnmakiLAGRRYTCFILS
Flexible Loop (DISEMBL)
mafqrrrqhhnhqhrlrvVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRrftstdnvdgptgvpvfrvqrdggkLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIvtsgglnqqrTGIIDAVVAARILNATLvipkldqksfWKDASDFSEIFDVDRFIsvlskdvkiikqiprkggksltpyhmrvprkcnekcyQNRVLPVLLKRHAVQLSKFDYRLANkldtdlqklrcRVNYHalsftdsiQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWktlhisnpdkerrhgkcpLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVtnnngnmakilagrrytCFILS
Low Complexity Region (SEG)
MAFqrrrqhhnhqhrlrvvvPiissvfsallilfallsflapspsDTDHLHHPRRFTSTDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFILS
Disordered region (IsUnstruct)
*************HRLRVVVPIISSVFSALLILFALLSFLA************************TGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHIS*******HGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFIL*
Disordered Region (DISOPRED)
***************LRVVVPIISSVFSALLILFALLSFLAPSPSDT****************************************RNAQFYHGCSI****************YLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRK*G*******MRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRW***************KCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELE*FSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFIL*
Disordered Region (DISEMBL)
************QHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFILS
Disordered Region (DISPRO)
*******QHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHH*******D*********V***********RDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFILS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCFILS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	433	2.2.26 [Sep-21-2011]
Q8W486	519	Uncharacterized protein A	no	no	0.787	0.657	0.401	3e-65

>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1

 Score =  249 bits (636), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 10/351 (2%)

Query: 83  DIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILN 142
           ++W S  +  +   S   S +        +N YL +  +GGLNQQR+ I +AV+AARI+N
Sbjct: 61  ELWESAKSGGWRPSSAPRSDWPPP--TKETNGYLRVRCNGGLNQQRSAICNAVLAARIMN 118

Query: 143 ATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIP--RKGGKS--LTPYHM 198
           ATLV+P+LD  SFW D S F  I+DV+ FI  L  DVKI+ +IP   K GK+  +  + +
Sbjct: 119 ATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPDVHKNGKTKKIKAFQI 178

Query: 199 RVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDT-DLQKLRCRVNYHALSFTDS 257
           R PR    + Y    L  + +  A+ L+ F +RLA ++D  + Q+LRCRVNYHAL F   
Sbjct: 179 RPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPH 238

Query: 258 IQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHI 317
           I K+ E +V ++R +G H++++HLRFE DMLAF+GC+     +E+K L   RK       
Sbjct: 239 IMKLSESIVDKLRSQG-HFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENFADKR 297

Query: 318 SNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYS 377
              ++ R  GKCPLTP EVGL+LRA+ + +   IY+A+GE++GGE+ + P + LFP   +
Sbjct: 298 LIYNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLDN 357

Query: 378 KETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNG--NMAKILAGRR 426
             ++   E    +S     +A+D++VC  SDIF+   +G  N A  L G R
Sbjct: 358 HSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHR 408

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	433
224086024	574	predicted protein [Populus trichocarpa]	0.976	0.736	0.772	0.0
224061893	562	predicted protein [Populus trichocarpa]	0.976	0.752	0.768	0.0
255539186	570	conserved hypothetical protein [Ricinus	0.979	0.743	0.757	0.0
297842381	572	hypothetical protein ARALYDRAFT_476779 [	0.969	0.734	0.747	0.0
449455589	574	PREDICTED: DUF246 domain-containing prot	0.974	0.735	0.765	0.0
18411065	572	O-fucosyltransferase-like protein [Arabi	0.969	0.734	0.737	0.0
356508770	568	PREDICTED: DUF246 domain-containing prot	0.969	0.739	0.770	0.0
297850472	568	F2D10.3 [Arabidopsis lyrata subsp. lyrat	0.974	0.742	0.734	0.0
6554491	572	putative auxin-independent growth promot	0.969	0.734	0.733	0.0
356517438	570	PREDICTED: DUF246 domain-containing prot	0.969	0.736	0.757	0.0

>gi|224086024|ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|222857231|gb|EEE94778.1| predicted protein [Populus trichocarpa]

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/431 (77%), Positives = 372/431 (86%), Gaps = 8/431 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPR-RFTST 59
           MAF RRR H+    R R V+P+IS+V   LLILF LL+FLAP+P DT++ HH    +T+ 
Sbjct: 1   MAFHRRRNHY--YKRFRSVLPLISAVSGVLLILFGLLTFLAPAPIDTNNPHHKNLMYTAN 58

Query: 60  DNVD---GPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYL 116
           D V+   G  G PV  +   G K DRD+WSSRN+++++GCS AS+KF  A  +TH NRYL
Sbjct: 59  DVVEDTIGKPGEPVLHIPIKGRK-DRDVWSSRNSKYFYGCSNASNKFPNADAITHPNRYL 117

Query: 117 AIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLS 176
            I TSGGLNQQRTGI DAVVAARILNATLV+PKLDQKSFWKD+SDFSEIFDVD +IS L+
Sbjct: 118 LIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQKSFWKDSSDFSEIFDVDWYISSLA 177

Query: 177 KDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKL 236
            DVKIIK +PR+ GK+  P +MRVPRKC+E+CYQNRVLPVLLKRHA+QL+KFDYRLANKL
Sbjct: 178 NDVKIIKSLPRRRGKTWIPRNMRVPRKCSERCYQNRVLPVLLKRHAIQLTKFDYRLANKL 237

Query: 237 DTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYG 296
           DT LQKLRCRVNYHAL FTD I +MGEKLVH+MRMK KH+IALHLRFEPDMLAFSGCYYG
Sbjct: 238 DTQLQKLRCRVNYHALKFTDPILRMGEKLVHRMRMKSKHFIALHLRFEPDMLAFSGCYYG 297

Query: 297 GGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASG 356
           GGDKERKELGAIRKRWKTLH SNPDKERRHGKCPLTP EVGLMLRALGYGSDVHIYVASG
Sbjct: 298 GGDKERKELGAIRKRWKTLHASNPDKERRHGKCPLTPKEVGLMLRALGYGSDVHIYVASG 357

Query: 357 EVYGGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNN 415
           EVY GE+TLAPLKALFPNFY+KET+ASK ELEPFSSFSSRMAALDFIVCDESD+FVTNNN
Sbjct: 358 EVYDGEDTLAPLKALFPNFYTKETLASKEELEPFSSFSSRMAALDFIVCDESDVFVTNNN 417

Query: 416 GNMAKILAGRR 426
           GNMAKILAGRR
Sbjct: 418 GNMAKILAGRR 428

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061893|ref|XP_002300651.1| predicted protein [Populus trichocarpa] gi|222842377|gb|EEE79924.1| predicted protein [Populus trichocarpa]

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/428 (76%), Positives = 372/428 (86%), Gaps = 5/428 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           MAF RRR H+   +R R ++P+I S+  ALLILFALLSFLAP+P D+++  H     + +
Sbjct: 1   MAFHRRRNHY--YNRFRSILPLIFSISGALLILFALLSFLAPTPIDSNNPQHTNSLYARN 58

Query: 61  NV-DGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIV 119
            V +   G  V  V + G + DRDIWSS+N+ +Y+GCS AS KFA A  VT  NRYL IV
Sbjct: 59  GVVEDTIGQSVLHVPKKG-RTDRDIWSSKNSLYYYGCSNASIKFANADAVTQPNRYLLIV 117

Query: 120 TSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDV 179
           TSGGLNQQRTGIIDAVVAARILNATLV+P+LDQKSFWKD SDFSEIFDVD +IS LSKDV
Sbjct: 118 TSGGLNQQRTGIIDAVVAARILNATLVVPRLDQKSFWKDLSDFSEIFDVDWYISSLSKDV 177

Query: 180 KIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTD 239
           KIIK +P++GGK+  P +MRVPRKC+E+CYQNR+LPVLLKRHA+QL+KFDYR+AN+LDT 
Sbjct: 178 KIIKSLPKRGGKTWIPRNMRVPRKCSERCYQNRILPVLLKRHAIQLTKFDYRVANRLDTQ 237

Query: 240 LQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGD 299
           LQKLRCRVNYHAL FTD I +MGEKLVH+MRMK KH+IALHLRFEPDMLAFSGCYYGGGD
Sbjct: 238 LQKLRCRVNYHALKFTDPILRMGEKLVHRMRMKSKHFIALHLRFEPDMLAFSGCYYGGGD 297

Query: 300 KERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVY 359
           KERKELGAIRKRWKTLH+SNPDKERRHGKCPLTP EVGLMLRALGY SD+HIYVASGEVY
Sbjct: 298 KERKELGAIRKRWKTLHVSNPDKERRHGKCPLTPREVGLMLRALGYSSDIHIYVASGEVY 357

Query: 360 GGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNM 418
           GGEETLAPLKALFPNFY+KET+ASK ELEPFSSFSSRMAALDFIVCDESD+FVTNNNGNM
Sbjct: 358 GGEETLAPLKALFPNFYTKETLASKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNM 417

Query: 419 AKILAGRR 426
           A+ILAGRR
Sbjct: 418 ARILAGRR 425

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539186|ref|XP_002510658.1| conserved hypothetical protein [Ricinus communis] gi|223551359|gb|EEF52845.1| conserved hypothetical protein [Ricinus communis]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/428 (75%), Positives = 364/428 (85%), Gaps = 4/428 (0%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRR-FTST 59
           MAF RRR H+ +    R  +P+IS+V   LLI F LLS LAPSP  +D+ HH R  ++S 
Sbjct: 1   MAFHRRRNHYYNC--FRSFLPLISAVSGVLLIFFGLLSILAPSPKISDNFHHSRHDYSSI 58

Query: 60  DNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIV 119
              DG +G  VF V RDGG+LDRDIW+SRN++FY+GCS AS  F  A  VTH +RYL I 
Sbjct: 59  KVADGESGESVFHVPRDGGRLDRDIWTSRNSKFYYGCSNASKSFPNADKVTHRDRYLLIA 118

Query: 120 TSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDV 179
           TSGGLNQQRTGI DAVVAARILNATLV+PKLDQKSFWKD S+F EIFD+D FIS LSKDV
Sbjct: 119 TSGGLNQQRTGITDAVVAARILNATLVVPKLDQKSFWKDTSNFGEIFDLDWFISSLSKDV 178

Query: 180 KIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTD 239
           KIIK +P++GGK+ T ++MRVPRKC+EKCYQ+RVLPVLLKRHA+QL+KFDYRLANKLD  
Sbjct: 179 KIIKNLPKRGGKTWTTHNMRVPRKCSEKCYQSRVLPVLLKRHAIQLTKFDYRLANKLDGQ 238

Query: 240 LQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGD 299
           LQKLRCRVNYHAL FTD I +MG  LVH+MRMK KHYIALHLRFEPDMLAFSGCYYGGGD
Sbjct: 239 LQKLRCRVNYHALKFTDPILEMGRTLVHRMRMKSKHYIALHLRFEPDMLAFSGCYYGGGD 298

Query: 300 KERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVY 359
           +E ++LGAIRKRWKTLH+ NP+KERRHGKCPLTP EVGLMLRALGYGSDVHIYVASGEVY
Sbjct: 299 QEMEDLGAIRKRWKTLHMRNPEKERRHGKCPLTPKEVGLMLRALGYGSDVHIYVASGEVY 358

Query: 360 GGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNM 418
            GEE+LAPLK LFPNFY+KETIA K ELEPF SFSSRMAALDFIVCDESD+FVTNNNGNM
Sbjct: 359 RGEESLAPLKELFPNFYTKETIAGKEELEPFLSFSSRMAALDFIVCDESDVFVTNNNGNM 418

Query: 419 AKILAGRR 426
           A+ILAGRR
Sbjct: 419 ARILAGRR 426

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842381|ref|XP_002889072.1| hypothetical protein ARALYDRAFT_476779 [Arabidopsis lyrata subsp. lyrata] gi|297334913|gb|EFH65331.1| hypothetical protein ARALYDRAFT_476779 [Arabidopsis lyrata subsp. lyrata]

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/427 (74%), Positives = 368/427 (86%), Gaps = 7/427 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           M+F RRR  + + +RLR ++P++ +VF +LLILFA LSFLAP P D+D L    R++S D
Sbjct: 1   MSFHRRR--YPYYNRLRRLLPLVFAVFLSLLILFAFLSFLAPFPGDSDRLPPRVRYSSND 58

Query: 61  NVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVT 120
            +   TG   FR+ R GG+ DRDIW SRNA+F+ GCS ASSKFA +  VT ++RYL I T
Sbjct: 59  AIKA-TG---FRIPRAGGRSDRDIWRSRNAEFFFGCSNASSKFATSKAVTRNDRYLVIAT 114

Query: 121 SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVK 180
           SGGLNQQRTGI+DAVVAARILNATLV+PKLDQKS+WKDASDFS IFDVD FIS LS DVK
Sbjct: 115 SGGLNQQRTGIVDAVVAARILNATLVVPKLDQKSYWKDASDFSHIFDVDWFISFLSDDVK 174

Query: 181 IIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDL 240
           IIKQ+P KGG++ +   MRVPRKCNE+CY NRVLPVLLKRHAVQL+KFDYRL+NKL  DL
Sbjct: 175 IIKQLPLKGGRTWSTSRMRVPRKCNERCYINRVLPVLLKRHAVQLNKFDYRLSNKLSDDL 234

Query: 241 QKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDK 300
           QKLRCRVNYHAL FTD I  MG +LV +MR++ KH+IALHLRFEPDMLAFSGCYYGGGDK
Sbjct: 235 QKLRCRVNYHALKFTDPILTMGNELVRRMRLRSKHFIALHLRFEPDMLAFSGCYYGGGDK 294

Query: 301 ERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYG 360
           ER+EL AIR+RWKTLHI+NP+K+RR G+CPLTP EVGLMLRALGYGSDVHIYVASGEVYG
Sbjct: 295 ERRELAAIRRRWKTLHINNPEKQRRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYG 354

Query: 361 GEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMA 419
           GEE+LAPLKALFP+FYSK+TIA+K ELEPFSS+SSRMAALDF+VCDESD+FVTNNNGNMA
Sbjct: 355 GEESLAPLKALFPHFYSKDTIATKEELEPFSSYSSRMAALDFLVCDESDVFVTNNNGNMA 414

Query: 420 KILAGRR 426
           KILAGRR
Sbjct: 415 KILAGRR 421

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455589|ref|XP_004145535.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/430 (76%), Positives = 375/430 (87%), Gaps = 8/430 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDH--LHHPRRFTS 58
           MAFQRRR H+   HR R ++P IS++ + LL+ FALLSFLAPSP+D+ H  L  P +F +
Sbjct: 1   MAFQRRRNHY--YHRFRFLIPFISAISAGLLLFFALLSFLAPSPNDSHHHRLIPPVQFNA 58

Query: 59  TDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAI 118
             +V    GV  FRV R+G +  RD+W+SRNA+FY GCS AS+KF KA  +TH NRYL I
Sbjct: 59  ASDV--AIGVSHFRVPRNGARSGRDLWTSRNAKFYSGCSNASNKFLKANAITHPNRYLLI 116

Query: 119 VTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKD 178
            TSGGLNQQRTGI DAVVAARILNATLV+PKLDQKSFW+D+S+FSEIFDVD F+S LSKD
Sbjct: 117 ATSGGLNQQRTGITDAVVAARILNATLVVPKLDQKSFWRDSSNFSEIFDVDWFVSFLSKD 176

Query: 179 VKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDT 238
           VKII Q+P++GGK+   + MRVPRKC+E+CYQNRVLPVLLKRHA+QLSKFDYRLANKL+T
Sbjct: 177 VKIIHQLPKRGGKTWNTHSMRVPRKCSERCYQNRVLPVLLKRHAIQLSKFDYRLANKLET 236

Query: 239 DLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGG 298
           DLQKLRCRVNYHAL FTD IQKMGEKLV++MR K  HYIALHLR+EPDMLAFSGCYYGGG
Sbjct: 237 DLQKLRCRVNYHALKFTDPIQKMGEKLVNRMRAKSNHYIALHLRYEPDMLAFSGCYYGGG 296

Query: 299 DKERKELGAIRKRWKTLH-ISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGE 357
           +KER+ELGAIR+RWKTLH ++NPDKERRHGKCPLTP EVGLMLRALGYG DVHIYVASGE
Sbjct: 297 EKERRELGAIRRRWKTLHQVNNPDKERRHGKCPLTPEEVGLMLRALGYGQDVHIYVASGE 356

Query: 358 VYGGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNG 416
           VYGGEETLAPLKALFPNF+SKETIASK EL+ FSS+SSRMAALDFIVCDESD+FVTNNNG
Sbjct: 357 VYGGEETLAPLKALFPNFHSKETIASKAELDKFSSYSSRMAALDFIVCDESDVFVTNNNG 416

Query: 417 NMAKILAGRR 426
           NMA+ILAGRR
Sbjct: 417 NMARILAGRR 426

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411065|ref|NP_565129.1| O-fucosyltransferase-like protein [Arabidopsis thaliana] gi|15292905|gb|AAK92823.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] gi|24030493|gb|AAN41394.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] gi|332197696|gb|AEE35817.1| O-fucosyltransferase-like protein [Arabidopsis thaliana]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/427 (73%), Positives = 365/427 (85%), Gaps = 7/427 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           M F RRR  + + +RLR ++P++ +V  +LLILFA LSFLAP P D+D L    R++S D
Sbjct: 1   MNFHRRR--YPYYNRLRRLLPLVIAVSLSLLILFAFLSFLAPPPGDSDRLPPRVRYSSND 58

Query: 61  NVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVT 120
            +   TG   F + R GG+ DRDIW SRNA+F+ GCS ASSKFA +  VT ++RYL I T
Sbjct: 59  AIKA-TG---FHIPRAGGRSDRDIWRSRNAEFFFGCSNASSKFANSKAVTRNDRYLVIAT 114

Query: 121 SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVK 180
           SGGLNQQRTGI+DAVVAARILNATLV+PKLDQKS+WKDASDFS IFDVD FIS LS DV+
Sbjct: 115 SGGLNQQRTGIVDAVVAARILNATLVVPKLDQKSYWKDASDFSHIFDVDWFISFLSGDVR 174

Query: 181 IIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDL 240
           IIKQ+P KGG++ +   MRVPRKCNE+CY NRVLPVLLKRHAVQL+KFDYRL+NKL  DL
Sbjct: 175 IIKQLPLKGGRTWSTSRMRVPRKCNERCYINRVLPVLLKRHAVQLNKFDYRLSNKLSDDL 234

Query: 241 QKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDK 300
           QKLRCRVNYHAL FTD I  MG +LV +MR++ KH+IALHLR+EPDMLAFSGCYYGGGDK
Sbjct: 235 QKLRCRVNYHALKFTDPILTMGNELVRRMRLRSKHFIALHLRYEPDMLAFSGCYYGGGDK 294

Query: 301 ERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYG 360
           ER+EL AIR+RWKTLHI+NP+K+RR G+CPLTP EVGLMLRALGYGSDVHIYVASGEVYG
Sbjct: 295 ERRELAAIRRRWKTLHINNPEKQRRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYG 354

Query: 361 GEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMA 419
           GEE+LAPLKALFP+FYSK+TIA+K ELEPFSS+SSRMAALDF+VCDESD+FVTNNNGNMA
Sbjct: 355 GEESLAPLKALFPHFYSKDTIATKEELEPFSSYSSRMAALDFLVCDESDVFVTNNNGNMA 414

Query: 420 KILAGRR 426
           KILAGRR
Sbjct: 415 KILAGRR 421

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508770|ref|XP_003523127.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/427 (77%), Positives = 370/427 (86%), Gaps = 7/427 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           MA QRRR HH +Q R R ++P+ S+V +AL  LFALLSFLAPSP +TD +H  R+ TS D
Sbjct: 1   MAHQRRR-HHYYQ-RFRHMIPVFSAVAAALFFLFALLSFLAPSPVETDRIHRRRQHTSDD 58

Query: 61  NVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVT 120
            +D P     FRV  DGGKL RDIWSS N++ + GCS +S+KF KA  +T  NRYL I T
Sbjct: 59  AIDNP----AFRVPGDGGKLGRDIWSSLNSEHFFGCSNSSNKFQKAQVITQPNRYLMIAT 114

Query: 121 SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVK 180
           SGGLNQQRTGI DAVVAARILNATLV+PKLDQ+SFWKD+S+FSEIFDVD FIS LSKDVK
Sbjct: 115 SGGLNQQRTGITDAVVAARILNATLVVPKLDQRSFWKDSSNFSEIFDVDWFISFLSKDVK 174

Query: 181 IIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDL 240
           IIKQ+P KG K+L+ Y+MRVPRKCNE+CY NR+LPVLLK+HAVQLSKFDYRLAN+LDT+ 
Sbjct: 175 IIKQLPTKGRKALSAYNMRVPRKCNERCYINRILPVLLKKHAVQLSKFDYRLANRLDTEY 234

Query: 241 QKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDK 300
           QKLRCRVNYHAL FT+ I  MGEKLVH+MRM+ KHYIALHLRFEPDMLAFSGC YGGG+K
Sbjct: 235 QKLRCRVNYHALRFTNPILAMGEKLVHRMRMRSKHYIALHLRFEPDMLAFSGCDYGGGEK 294

Query: 301 ERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYG 360
           E+KELGAIR+RWKTLH SNPD+ RR G+CPLTP EVGLMLRALGYGSD+HIYVASGEVYG
Sbjct: 295 EQKELGAIRRRWKTLHRSNPDRARRQGRCPLTPEEVGLMLRALGYGSDIHIYVASGEVYG 354

Query: 361 GEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMA 419
           GE TLAPLKALFPNF+SKETIA+K ELEPFSSFSSRMAALDFIVCDESD+FVTNNNGNMA
Sbjct: 355 GERTLAPLKALFPNFHSKETIATKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMA 414

Query: 420 KILAGRR 426
           KILAGRR
Sbjct: 415 KILAGRR 421

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850472|ref|XP_002893117.1| F2D10.3 [Arabidopsis lyrata subsp. lyrata] gi|297338959|gb|EFH69376.1| F2D10.3 [Arabidopsis lyrata subsp. lyrata]

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/429 (73%), Positives = 369/429 (86%), Gaps = 7/429 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           MAFQRRR  +N+ +RLR+++P+I +V  ALLILFALLS L+P P D+D     +    T+
Sbjct: 1   MAFQRRR--YNYYNRLRLLLPLICAVSGALLILFALLSILSPPPDDSDRRISKQIHYGTN 58

Query: 61  NVDGPTGVPV-FRV-QRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAI 118
             D    +PV F V QR GGKLDRDIW S NA+F++GC  ASSKF  A  +T ++RYLAI
Sbjct: 59  --DEKKNIPVVFTVPQRGGGKLDRDIWRSWNAEFFYGCCNASSKFPNAKAITRNDRYLAI 116

Query: 119 VTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKD 178
            TSGGLNQQRTGI+DAVVAARILNATLVIPKLDQKS+WKDASDFS IFDVD FIS LSKD
Sbjct: 117 ATSGGLNQQRTGIVDAVVAARILNATLVIPKLDQKSYWKDASDFSNIFDVDWFISFLSKD 176

Query: 179 VKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDT 238
           VKII+++P+KGG++ +P  MRVPRKCNEKCY NRVLPVL KRHAV+L++FDYRL+NKL  
Sbjct: 177 VKIIEKLPQKGGQTWSPRRMRVPRKCNEKCYINRVLPVLQKRHAVELNRFDYRLSNKLRE 236

Query: 239 DLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGG 298
           DLQKLRCRVNYHAL FTD I +MG +LV +MR K KH+IALHLRFEPDMLAFSGCYYGGG
Sbjct: 237 DLQKLRCRVNYHALKFTDPILEMGNELVRRMRKKSKHFIALHLRFEPDMLAFSGCYYGGG 296

Query: 299 DKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEV 358
           +KE+KELG IR+RWKTLH++NP+K+RR G+CPLTP EVGLMLRALGYGSDVHIYVASGEV
Sbjct: 297 EKEKKELGTIRRRWKTLHVNNPEKQRRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEV 356

Query: 359 YGGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGN 417
           YGGE++L PLKALFP+FYSK+TIA+K EL+PFSS+SSRMAALDF+VCDESD+FVTNNNGN
Sbjct: 357 YGGEKSLVPLKALFPHFYSKDTIATKMELKPFSSYSSRMAALDFLVCDESDVFVTNNNGN 416

Query: 418 MAKILAGRR 426
           MA+ILAGRR
Sbjct: 417 MARILAGRR 425

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6554491|gb|AAF16673.1|AC012394_22 putative auxin-independent growth promoter; 88924-91907 [Arabidopsis thaliana]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/427 (73%), Positives = 364/427 (85%), Gaps = 7/427 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           M F RRR  + + +RLR ++P++ +V  +LLILFA LSFLAP P D+D L    R++S D
Sbjct: 1   MNFHRRR--YPYYNRLRRLLPLVIAVSLSLLILFAFLSFLAPPPGDSDRLPPRVRYSSND 58

Query: 61  NVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVT 120
            +   TG   F + R GG+ DRDIW SRNA+F+ GCS ASSKFA +  VT ++RYL I T
Sbjct: 59  AIKA-TG---FHIPRAGGRSDRDIWRSRNAEFFFGCSNASSKFANSKAVTRNDRYLVIAT 114

Query: 121 SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVK 180
           SGGLNQQRTGI+DAVVAARILNATLV+PKLDQKS+WKDASDFS IFDVD FIS LS DV+
Sbjct: 115 SGGLNQQRTGIVDAVVAARILNATLVVPKLDQKSYWKDASDFSHIFDVDWFISFLSGDVR 174

Query: 181 IIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDL 240
           IIKQ+P KGG++ +   MRVPRKCNE+CY NRVLPVLLKRH +QL+KFDYRL+NKL  DL
Sbjct: 175 IIKQLPLKGGRTWSTSRMRVPRKCNERCYINRVLPVLLKRHVIQLNKFDYRLSNKLSDDL 234

Query: 241 QKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDK 300
           QKLRCRVNYHAL FTD I  MG +LV +MR++ KH+IALHLR+EPDMLAFSGCYYGGGDK
Sbjct: 235 QKLRCRVNYHALKFTDPILTMGNELVRRMRLRSKHFIALHLRYEPDMLAFSGCYYGGGDK 294

Query: 301 ERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYG 360
           ER+EL AIR+RWKTLHI+NP+K+RR G+CPLTP EVGLMLRALGYGSDVHIYVASGEVYG
Sbjct: 295 ERRELAAIRRRWKTLHINNPEKQRRQGRCPLTPEEVGLMLRALGYGSDVHIYVASGEVYG 354

Query: 361 GEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMA 419
           GEE+LAPLKALFP+FYSK+TIA+K ELEPFSS+SSRMAALDF+VCDESD+FVTNNNGNMA
Sbjct: 355 GEESLAPLKALFPHFYSKDTIATKEELEPFSSYSSRMAALDFLVCDESDVFVTNNNGNMA 414

Query: 420 KILAGRR 426
           KILAGRR
Sbjct: 415 KILAGRR 421

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517438|ref|XP_003527394.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max]

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/428 (75%), Positives = 371/428 (86%), Gaps = 8/428 (1%)

Query: 1   MAFQRRRQHHNHQHRLRVVVPIISSVFSALLILFALLSFLAPSPSDTDHLHHPRRFTSTD 60
           MA QRRRQH+    R R+++P+ S+V + LL LFALLSFLAPSP +TD +H  R+ TS +
Sbjct: 1   MAHQRRRQHY--YQRFRLMIPVFSAVAATLLFLFALLSFLAPSPVETDRIHRRRQHTSDE 58

Query: 61  NVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVT 120
            ++       FRV  DGGKL R+IWSSRN++ +HGCS +S+KF KA  +T  NRYL I T
Sbjct: 59  AIENS----AFRVPSDGGKLGRNIWSSRNSEHFHGCSNSSNKFQKAQVITQPNRYLMITT 114

Query: 121 SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVK 180
           SGGLNQQRTGI DAVVAARILNATLV+PKLDQ+SFWKD+S+FSEIFDVD FIS LSKDVK
Sbjct: 115 SGGLNQQRTGITDAVVAARILNATLVVPKLDQRSFWKDSSNFSEIFDVDWFISFLSKDVK 174

Query: 181 IIKQIPRKGG-KSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTD 239
           IIKQ+P KG  K+L+ Y+MRVPRKCNE+CY NR+LPVLLK+HAVQLSKFDYRLAN+LDT+
Sbjct: 175 IIKQLPTKGSRKALSAYNMRVPRKCNERCYINRILPVLLKKHAVQLSKFDYRLANRLDTE 234

Query: 240 LQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGD 299
            QKLRCRVNYHAL FT+ I  MGEKLVH+MRM+ KHYIALHLRFEPDMLAFSGC YGGG+
Sbjct: 235 YQKLRCRVNYHALRFTNPILAMGEKLVHRMRMRSKHYIALHLRFEPDMLAFSGCDYGGGE 294

Query: 300 KERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVY 359
           KE+KELGAIR+RWKTLH SNPD+ RR G+CPLTP EVGLMLRALGYGSD+HIYVASGEVY
Sbjct: 295 KEQKELGAIRRRWKTLHKSNPDRARRQGRCPLTPEEVGLMLRALGYGSDIHIYVASGEVY 354

Query: 360 GGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNM 418
           GG+ TLAPL+ALFPNF+SKETIA+K ELEPFSSFSSRMAALDFIVCDESD+FVTNNNGNM
Sbjct: 355 GGKRTLAPLRALFPNFHSKETIATKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNM 414

Query: 419 AKILAGRR 426
           AKILAGRR
Sbjct: 415 AKILAGRR 422

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	433
TAIR|locus:2014619	572	AT1G76270 [Arabidopsis thalian	0.868	0.657	0.767	1.1e-156
TAIR|locus:2121793	551	RHS17 "root hair specific 17"	0.859	0.675	0.676	8.3e-138
TAIR|locus:2130938	549	AT4G16650 [Arabidopsis thalian	0.794	0.626	0.632	7.9e-117
TAIR|locus:2009467	565	AT1G22460 [Arabidopsis thalian	0.720	0.552	0.493	3.6e-73
TAIR|locus:2174754	522	AT5G64600 [Arabidopsis thalian	0.863	0.716	0.406	3.6e-73
TAIR|locus:2143181	508	AT5G15740 [Arabidopsis thalian	0.734	0.625	0.455	3.3e-70
TAIR|locus:2049527	567	AT2G01480 [Arabidopsis thalian	0.748	0.571	0.432	1.8e-69
TAIR|locus:2076552	512	AT3G02250 [Arabidopsis thalian	0.741	0.626	0.448	9.2e-68
TAIR|locus:2080285	638	AT3G54100 [Arabidopsis thalian	0.775	0.526	0.426	9.2e-68
TAIR|locus:2056981	508	AT2G03280 [Arabidopsis thalian	0.621	0.529	0.440	4.2e-67

TAIR|locus:2014619 AT1G76270 [Arabidopsis thaliana (taxid:3702)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 294/383 (76%), Positives = 335/383 (87%)

Query:    46 DTDHLHHPR-RFTSTDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFA 104
             D+D L  PR R++S D +   TG   F + R GG+ DRDIW SRNA+F+ GCS ASSKFA
Sbjct:    44 DSDRLP-PRVRYSSNDAIKA-TG---FHIPRAGGRSDRDIWRSRNAEFFFGCSNASSKFA 98

Query:   105 KAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSE 164
              +  VT ++RYL I TSGGLNQQRTGI+DAVVAARILNATLV+PKLDQKS+WKDASDFS 
Sbjct:    99 NSKAVTRNDRYLVIATSGGLNQQRTGIVDAVVAARILNATLVVPKLDQKSYWKDASDFSH 158

Query:   165 IFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQ 224
             IFDVD FIS LS DV+IIKQ+P KGG++ +   MRVPRKCNE+CY NRVLPVLLKRHAVQ
Sbjct:   159 IFDVDWFISFLSGDVRIIKQLPLKGGRTWSTSRMRVPRKCNERCYINRVLPVLLKRHAVQ 218

Query:   225 LSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFE 284
             L+KFDYRL+NKL  DLQKLRCRVNYHAL FTD I  MG +LV +MR++ KH+IALHLR+E
Sbjct:   219 LNKFDYRLSNKLSDDLQKLRCRVNYHALKFTDPILTMGNELVRRMRLRSKHFIALHLRYE 278

Query:   285 PDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALG 344
             PDMLAFSGCYYGGGDKER+EL AIR+RWKTLHI+NP+K+RR G+CPLTP EVGLMLRALG
Sbjct:   279 PDMLAFSGCYYGGGDKERRELAAIRRRWKTLHINNPEKQRRQGRCPLTPEEVGLMLRALG 338

Query:   345 YGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKE-LEPFSSFSSRMAALDFIV 403
             YGSDVHIYVASGEVYGGEE+LAPLKALFP+FYSK+TIA+KE LEPFSS+SSRMAALDF+V
Sbjct:   339 YGSDVHIYVASGEVYGGEESLAPLKALFPHFYSKDTIATKEELEPFSSYSSRMAALDFLV 398

Query:   404 CDESDIFVTNNNGNMAKILAGRR 426
             CDESD+FVTNNNGNMAKILAGRR
Sbjct:   399 CDESDVFVTNNNGNMAKILAGRR 421

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2121793 RHS17 "root hair specific 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 1349 (479.9 bits), Expect = 8.3e-138, P = 8.3e-138
 Identities = 257/380 (67%), Positives = 307/380 (80%)

Query:    50 LHHPRRFTSTDNVDGPTGVPVFRVQRDGGKLDRDIWSSRNAQFYHGCSIASSKFAKAGDV 109
             +HH  +     N   PT  P FRV  +GG+ DR +WSSR +  Y+ CS A+  F      
Sbjct:    66 IHHNNQVAVEPN---PT-TP-FRVPENGGRSDRQLWSSRLSNLYYACSNATDTFQVTDTR 120

Query:   110 THSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVD 169
             + +NRYL I TSGGLNQQRTGIIDAVVAA ILNATLV+PKLDQKS+WKD S+F +IFDVD
Sbjct:   121 SQTNRYLLIATSGGLNQQRTGIIDAVVAAYILNATLVVPKLDQKSYWKDTSNFEDIFDVD 180

Query:   170 RFISVLSKDVKIIKQIPRKGGKSLTP--YHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSK 227
              FIS LSKDVKIIK++P++    ++     MRVPRKC   CY  RVLP+L K+H VQLSK
Sbjct:   181 WFISHLSKDVKIIKELPKEEQSRISTSLQSMRVPRKCTPSCYLQRVLPILTKKHVVQLSK 240

Query:   228 FDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDM 287
             FDYRL+N LDT+LQKLRCRVNYHA+ +T+SI +MG+ LV +MR K KH++ALHLRFEPDM
Sbjct:   241 FDYRLSNALDTELQKLRCRVNYHAVRYTESINRMGQLLVDRMRKKAKHFVALHLRFEPDM 300

Query:   288 LAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGS 347
             LAFSGCYYGGG KER ELGA+R+RWKTLH +NP+K RRHG+CPLTP E+GLMLR LG+G 
Sbjct:   301 LAFSGCYYGGGQKERLELGAMRRRWKTLHAANPEKVRRHGRCPLTPEEIGLMLRGLGFGK 360

Query:   348 DVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDE 406
             +VH+YVASGEVYGGE+TLAPL+ALFPN ++KET+ SK EL PF++FSSRMAALDFIVCD+
Sbjct:   361 EVHLYVASGEVYGGEDTLAPLRALFPNLHTKETLTSKKELAPFANFSSRMAALDFIVCDK 420

Query:   407 SDIFVTNNNGNMAKILAGRR 426
             SD FVTNNNGNMA+ILAGRR
Sbjct:   421 SDAFVTNNNGNMARILAGRR 440

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)]

 Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
 Identities = 219/346 (63%), Positives = 272/346 (78%)

Query:    83 DIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILN 142
             D+W S+ ++F++GCS     F  A     SN YL I  SGGLNQQRTGI DAVV ARILN
Sbjct:    93 DVWKSKYSKFFYGCSERGRNFLPAVQEQSSNGYLLIAASGGLNQQRTGITDAVVVARILN 152

Query:   143 ATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLT--PYHMRV 200
             ATLV+P+LD  S+WKD SDFS+IFDV+ FIS L+KDV I+K++P +  +++   PY  RV
Sbjct:   153 ATLVVPELDHHSYWKDDSDFSDIFDVNWFISSLAKDVTIVKRVPDRVMRAMEKPPYTTRV 212

Query:   201 PRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQK 260
             PRK   + Y ++VLP+L +RH +QL+KFDYRLAN LD D+QKLRCRVNYHAL FT  IQ 
Sbjct:   213 PRKSTLEYYLDQVLPILTRRHVLQLTKFDYRLANDLDEDMQKLRCRVNYHALRFTKRIQS 272

Query:   261 MGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNP 320
             +G K+V +MR   K +IA+HLRFEPDMLAFSGC +GGG+KER EL  IRKRW TL   +P
Sbjct:   273 VGMKVVKRMRKMAKRFIAVHLRFEPDMLAFSGCDFGGGEKERAELAEIRKRWDTLPDLDP 332

Query:   321 DKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKET 380
              +ER+ GKCPLTP EVGLMLRALG+ +D +IYVASGE+YGGE+TL PL+ LFPNFY+KE 
Sbjct:   333 LEERKRGKCPLTPHEVGLMLRALGFTNDTYIYVASGEIYGGEKTLKPLRELFPNFYTKEM 392

Query:   381 IASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRR 426
             +A+ EL+P   +SSR+AA+D+IV DESD+F+TNNNGNMAKILAGRR
Sbjct:   393 LANDELKPLLPYSSRLAAIDYIVSDESDVFITNNNGNMAKILAGRR 438

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 158/320 (49%), Positives = 209/320 (65%)

Query:   112 SNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRF 171
             S  YL + T+GGLNQ R GI D V  ARI+NATLV+P+LD++SFW+D S FS++FD D F
Sbjct:   160 SRGYLLVHTNGGLNQMRAGICDMVAIARIINATLVVPELDKRSFWQDTSKFSDVFDEDHF 219

Query:   172 ISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYR 231
             I+ LSKD+++IK++P KG   LT              YQN +  +  +   ++ +K D R
Sbjct:   220 INALSKDIRVIKKLP-KGIDGLTKVVKHFKSYSGLSYYQNEIASMWDEYKVIRAAKSDSR 278

Query:   232 LANK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAF 290
             LAN  L  D+QKLRCR  Y AL F+  I+ MGE LV +MR  G  YIALHLRFE +MLAF
Sbjct:   279 LANNNLPPDIQKLRCRACYEALRFSTKIRSMGELLVDRMRSYGL-YIALHLRFEKEMLAF 337

Query:   291 SGCYYGGGDKERKELGAIRKR---WKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGS 347
             SGC +G    E  EL  IRK    WK   I     +R  G CPLTP EVG++L ALGY S
Sbjct:   338 SGCNHGLSASEAAELRRIRKNTAYWKVKDIDGR-VQRLKGYCPLTPKEVGILLTALGYSS 396

Query:   348 DVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKE-LEPFSSFSSRMAALDFIVCDE 406
             D  +Y+A+GE+YGGE  LA L++ F    SKE +A++E L+ F + S++MAALD+IV  E
Sbjct:   397 DTPVYIAAGEIYGGESRLADLRSRFSMLMSKEKLATREELKTFMNHSTQMAALDYIVSIE 456

Query:   407 SDIFVTNNNGNMAKILAGRR 426
             SD+F+ + +GNMA+ + G R
Sbjct:   457 SDVFIPSYSGNMARAVEGHR 476

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 158/389 (40%), Positives = 244/389 (62%)

Query:    46 DTDHLHHPRRFTSTDNVDGPTGVPVFRVQRDGGKL---DRDIWSSRNAQFYHGCSIASSK 102
             D DH  H ++    D +D  +  P +   R   +    +  +W+   +   H C   + K
Sbjct:    52 DDDHTKHQQQH-HRDLIDSESFPPPYLPPRKNLQKPYENTQLWTPPFSFGLHPCVKPTPK 110

Query:   103 FAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDF 162
             +    + + S+ Y+ + ++GGLNQ RTGI D V  A I+NATLVIP+LD++SFW+D+S F
Sbjct:   111 YK---EFSESDHYITVKSNGGLNQMRTGIADIVAVAHIMNATLVIPELDKRSFWQDSSVF 167

Query:   163 SEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHA 222
             S+IFD ++FI  L +DVK+IK++P++  +SL P   +     +   Y   +  +  +   
Sbjct:   168 SDIFDEEQFIKSLRRDVKVIKKLPKEV-ESL-PRARKHFTSWSSVGYYEEMTHLWKEYKV 225

Query:   223 VQLSKFDYRLANK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHL 281
             + ++K D RLAN  L  D+Q+LRCRV Y  L F+ +I+ +G+KLV +++ +   YIALHL
Sbjct:   226 IHVAKSDSRLANNDLPIDVQRLRCRVLYRGLCFSPAIESLGQKLVERLKSRAGRYIALHL 285

Query:   282 RFEPDMLAFSGCYYGGGDKERKELGAIRK---RWKTLHISNPDKERRHGKCPLTPLEVGL 338
             R+E DMLAF+GC YG  D E +EL  +R+    WK   I N  ++R  G CPLTP EVG+
Sbjct:   286 RYEKDMLAFTGCTYGLTDAESEELRVMRESTSHWKIKSI-NSTEQREEGLCPLTPKEVGI 344

Query:   339 MLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIA-SKELEPFSSFSSRMA 397
              L+ LGY     IY+A+GE+YGG++ L+ LK+ FPN   KET+A ++EL+ F+  +++ A
Sbjct:   345 FLKGLGYSQSTVIYIAAGEIYGGDDRLSELKSRFPNLVFKETLAGNEELKGFTGHATKTA 404

Query:   398 ALDFIVCDESDIFVTNNNGNMAKILAGRR 426
             ALD+I+  ESD+FV +++GNMA+ + G R
Sbjct:   405 ALDYIISVESDVFVPSHSGNMARAVEGHR 433

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 149/327 (45%), Positives = 211/327 (64%)

Query:   112 SNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRF 171
             +N YL +  +GGLNQ R  I D V  AR +N TL++P+LD+ SFW D S+F +IFDVD F
Sbjct:   106 NNGYLMVSCNGGLNQMRAAICDMVTVARYMNVTLIVPELDKTSFWNDPSEFKDIFDVDHF 165

Query:   172 ISVLSKDVKIIKQIPRKGGK--SLTPYHMRVPRK-CNEKCYQNRVLPVLLKRHAVQLSKF 228
             IS L  +V+I+K++P +  K   L  YH   P    N   YQN++LP++ K   + L++ 
Sbjct:   166 ISSLRDEVRILKELPPRLKKRVELGVYHEMPPISWSNMSYYQNQILPLVKKHKVLHLNRT 225

Query:   229 DYRLANK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDM 287
             D RLAN  L  ++QKLRCRVN++ L FT  I+++G ++V  +R KG  ++ LHLR+E DM
Sbjct:   226 DTRLANNGLPVEVQKLRCRVNFNGLKFTPQIEELGRRVVKILREKGP-FLVLHLRYEMDM 284

Query:   288 LAFSGCYYGGGDKERKELGAIRKR--WKTLHISNPDKERRHGKCPLTPLEVGLMLRALGY 345
             LAFSGC +G   +E +EL  +R    W    + N + +R+ G CPLTP E  L L ALG 
Sbjct:   285 LAFSGCSHGCNPEEEEELTRMRYAYPWWKEKVINSELKRKDGLCPLTPEETALTLTALGI 344

Query:   346 GSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIA-SKELEPFSSFSSRMAALDFIVC 404
               +V IY+A+GE+YGG+  +  L   FPN   KET+  S +L+   + SS+MAALD++V 
Sbjct:   345 DRNVQIYIAAGEIYGGQRRMKALTDAFPNVVRKETLLESSDLDFCRNHSSQMAALDYLVA 404

Query:   405 DESDIFVTNNNGNMAKILAG-RRYTCF 430
              ESDIFV  N+GNMA+++ G RR+  F
Sbjct:   405 LESDIFVPTNDGNMARVVEGHRRFLGF 431

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 147/340 (43%), Positives = 213/340 (62%)

Query:   107 GDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIF 166
             GD+  SN Y+ +  +GGLNQQRT I +AV  A  LNATLVIP     S W+D S F +I+
Sbjct:   149 GDLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFGDIY 208

Query:   167 DVDRFISVLSKDVKIIKQIPR----KGGKSLTP-YHMRVPRKCNEKCYQNRVLPVLLKRH 221
             D + F+S LS DV+++  IP     +   ++T  Y+ RV      + Y++ +LP LL+  
Sbjct:   209 DEEFFVSTLSNDVRVVDTIPEYLMERFDHNMTNVYNFRVKAWSPIQYYRDSILPKLLEEK 268

Query:   222 AVQLSKFDYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMK----GKHYI 277
              +++S F  RL+      +Q+LRC  NY AL F+ +I  +GE LV +M+ +    G  Y+
Sbjct:   269 IIRISPFANRLSFDAPQAVQRLRCLANYEALKFSKTILTLGETLVKRMKEQSANHGAKYV 328

Query:   278 ALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKR-WKTL-----HISNPDKERRHGKCPL 331
             ++HLRFE DM+AFS C + GG++E++++ A R+R WK        +  P   R++GKCPL
Sbjct:   329 SVHLRFEEDMVAFSCCIFDGGNQEKQDMIAARERGWKGKFTKPGRVIRPGAIRQNGKCPL 388

Query:   332 TPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASKE-LEPFS 390
             TPLEVGLMLR +G+    +I++ASGE+Y    T+APL  +FPN  +KE +AS+E L P+ 
Sbjct:   389 TPLEVGLMLRGMGFNKSTYIFLASGEIYDANRTMAPLLEMFPNLQTKEMLASEEELAPYK 448

Query:   391 SFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRYTCF 430
             +FSSRMAA+D+ VC  S++FVT   GN    L G R   F
Sbjct:   449 NFSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMGHRRYMF 488

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 148/330 (44%), Positives = 208/330 (63%)

Query:   109 VTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDV 168
             +  +N YL +  +GGLNQ R  I D V  AR +N TL++P+LD+ SFW D S+F +IFDV
Sbjct:   103 IYQNNGYLMVSCNGGLNQMRAAICDMVTIARYMNVTLIVPELDKTSFWNDPSEFKDIFDV 162

Query:   169 DRFISVLSKDVKIIKQIPR--KGGKSLTPYHMRVPRK-CNEKCYQNRVLPVLLKRHAVQL 225
             D FIS L  +V+I+K++P   K    L  YH   P    N   YQ+++LP++ K   V L
Sbjct:   163 DHFISSLRDEVRILKELPPRLKRRVRLGLYHTMPPISWSNMSYYQDQILPLVKKYKVVHL 222

Query:   226 SKFDYRLAN-KLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFE 284
             +K D RLAN +L  ++QKLRCR N++ L FT  I+++G ++V  +R KG  ++ LHLR+E
Sbjct:   223 NKTDTRLANNELPVEIQKLRCRANFNGLRFTPKIEELGRRVVKILREKGP-FLVLHLRYE 281

Query:   285 PDMLAFSGCYYGGGDKERKELGAIRKR--WKTLHISNPDKERRHGKCPLTPLEVGLMLRA 342
              DMLAFSGC +G    E +EL  +R    W    + + + +R+ G CPLTP E  L L A
Sbjct:   282 MDMLAFSGCSHGCNRYEEEELTRMRYAYPWWKEKVIDSELKRKEGLCPLTPEETALTLSA 341

Query:   343 LGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIA-SKELEPFSSFSSRMAALDF 401
             LG   +V IY+A+GE+YGG+  L  L  +FPN   KET+  S +L    + SS+MAALD+
Sbjct:   342 LGIDRNVQIYIAAGEIYGGKRRLKALTDVFPNVVRKETLLDSSDLSFCKNHSSQMAALDY 401

Query:   402 IVCDESDIFVTNNNGNMAKILAG-RRYTCF 430
             ++  ESDIFV    GNMAK++ G RR+  F
Sbjct:   402 LISLESDIFVPTYYGNMAKVVEGHRRFLGF 431

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 150/352 (42%), Positives = 220/352 (62%)

Query:    83 DIWSSRNAQFYHGCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQRTGIIDAVVAARILN 142
             +IW    +  Y  C      + +    T  N YL +  +GGLNQ RTGI D V  A+I+N
Sbjct:   195 EIWQKPESGNYRQCVTRPKNYTRLQRQT--NGYLVVHANGGLNQMRTGICDMVAVAKIMN 252

Query:   143 ATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPR 202
             ATLV+P LD +SFW D S F +IFD   F++VL  DV I++ +P +   ++ P  ++ P 
Sbjct:   253 ATLVLPLLDHESFWTDPSTFKDIFDWRNFMNVLKHDVDIVEYLPPQYA-AMKPL-LKAPV 310

Query:   203 KCNEKCY-QNRVLPVLLKRHAV-QLSKFDYRLANK-LDTDLQKLRCRVNYHALSFTDSIQ 259
               ++  Y ++ +LP LLKRH V + +  D RLAN  L   +Q+LRCR NY AL +T  I+
Sbjct:   311 SWSKASYYRSEMLP-LLKRHKVLKFTLTDSRLANNGLPPSIQRLRCRANYQALLYTKEIE 369

Query:   260 KMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIR---KRWKTLH 316
              +G+ LV+++R   + YIALHLR+E DMLAF+GC +    +E +EL  +R   K WK   
Sbjct:   370 DLGKILVNRLRNNTEPYIALHLRYEKDMLAFTGCNHNLTTEEAEELRIMRYSVKHWKEKE 429

Query:   317 ISNPDKERR-HGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNF 375
             I +  +ERR  G CP++P E  + L+A+GY S   +Y+ +GE+YG E ++   +A +PN 
Sbjct:   430 IDS--RERRIQGGCPMSPREAAIFLKAMGYPSSTTVYIVAGEIYGSE-SMDAFRAEYPNV 486

Query:   376 YSKETIASKE-LEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRR 426
             +S  T+A++E LEPFS + +R+AALD+IV  ESD+FV   +GNMAK + G R
Sbjct:   487 FSHSTLATEEELEPFSQYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHR 538

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)]

 Score = 552 (199.4 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
 Identities = 123/279 (44%), Positives = 171/279 (61%)

Query:   160 SDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKS--LTPYHMRVPRKCNEKCYQNRVLPVL 217
             SDF +IFD+  FI  L  +V+II+++P++  K      + M      N+K Y  +VLP  
Sbjct:   163 SDFEDIFDIKHFIDSLRDEVRIIRRLPKRYSKKYGFKLFEMPPVSWSNDKYYLQQVLPRF 222

Query:   218 LKRHAVQLSKFDYRLANK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHY 276
              KR  +   + D RLAN  L  DLQ+LRCRVN+  L FT  I+ +G KLV  ++ +G  +
Sbjct:   223 SKRKVIHFVRSDTRLANNGLSLDLQRLRCRVNFQGLRFTPRIEALGSKLVRILQQRGS-F 281

Query:   277 IALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKR---WKTLHISNPDKERRHGKCPLTP 333
             +ALHLR+E DMLAFSGC +G  D+E +EL  +R     W+   I + ++ R  G CPLTP
Sbjct:   282 VALHLRYEMDMLAFSGCTHGCTDEEAEELKKMRYAYPWWREKEIVSEER-RVQGLCPLTP 340

Query:   334 LEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASK-ELEPFSSF 392
              E  L+L+ALG+  D  IY+A+GE++GG + LA LK  FP    KE +    EL+ F + 
Sbjct:   341 EEAVLVLKALGFQKDTQIYIAAGEIFGGAKRLALLKESFPRIVKKEMLLDPTELQQFQNH 400

Query:   393 SSRMAALDFIVCDESDIFVTNNNGNMAKILAG-RRYTCF 430
             SS+MAALDFIV   S+ F+    GNMAK++ G RRY  F
Sbjct:   401 SSQMAALDFIVSVASNTFIPTYYGNMAKVVEGHRRYLGF 439

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_V000695 hypothetical protein (574 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	433
cd11299	290	cd11299, O-FucT_plant, GDP-fucose protein O-fucosy	1e-145
pfam10250	315	pfam10250, O-FucT, GDP-fucose protein O-fucosyltra	1e-115
cd11296	206	cd11296, O-FucT_like, GDP-fucose protein O-fucosyl	4e-10

>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily

 Score =  415 bits (1068), Expect = e-145
 Identities = 154/315 (48%), Positives = 203/315 (64%), Gaps = 36/315 (11%)

Query: 115 YLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISV 174
           YL +  +GGLNQQR+ I DAV  AR+LNATLV+P+LD+ S W D+S F +I+DVD FI  
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 175 LSKDVKIIKQIP-RKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDYRLA 233
           L  DV+++K++P     K       RVP + +   Y   VLP+L K   ++L+ FD RLA
Sbjct: 61  LKDDVRVVKKLPEELASKKPEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLA 120

Query: 234 NK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSG 292
           N  L  ++Q+LRCRVN+HAL F   I+++G+KLV ++R  G  ++ALHLRFE DMLAFSG
Sbjct: 121 NDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSG 180

Query: 293 CYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIY 352
           C                                 GKCPLTP EVGL+LRALG+     IY
Sbjct: 181 C---------------------------------GKCPLTPEEVGLLLRALGFPRSTRIY 207

Query: 353 VASGEVYGGEETLAPLKALFPNFYSKETIAS-KELEPFSSFSSRMAALDFIVCDESDIFV 411
           +A+GE+YGGE  L PL+++FPN Y+KET+A+ +EL PFS  SSR+AALD+IVC ESD+FV
Sbjct: 208 LAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFV 267

Query: 412 TNNNGNMAKILAGRR 426
               GN AK +AG R
Sbjct: 268 PTYGGNFAKAVAGHR 282

Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase

 Score =  340 bits (873), Expect = e-115
 Identities = 138/325 (42%), Positives = 188/325 (57%), Gaps = 23/325 (7%)

Query: 115 YLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISV 174
            +     GG NQQR  I DAV  AR+LNATLV+P  D+   WKD S FS+ FDV+ FIS 
Sbjct: 1   LVYCPCMGGFNQQRDVICDAVAVARLLNATLVLPPWDELYHWKDPSKFSDFFDVEHFISY 60

Query: 175 LSKDVKIIKQIP------RKGGKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKF 228
           LS+ V+I+K +P      ++          RV  + +   Y   VLP+L K   + L+  
Sbjct: 61  LSRVVEIVKFLPKELPSAKRLQYDTFKVDFRVCVQSSPSYYLESVLPLLKKHKVIALTGA 120

Query: 229 DYRLANK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDM 287
             RLAN  L  DLQ+L      HAL F+  I+++G KLV ++  KG  ++A+HLR E DM
Sbjct: 121 PARLANNYLPPDLQRL------HALRFSPEIEELGNKLVSRLLAKGGPFLAVHLRREIDM 174

Query: 288 LAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGYGS 347
             FSGC +GGGDKE + L + R         + ++ RR G CPLTP EVGL+LRALG+  
Sbjct: 175 --FSGCEHGGGDKESELLASPRCV--GYKRIDSEELRREGCCPLTPEEVGLLLRALGFPK 230

Query: 348 DVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSRMAALDFIVCDE 406
           D  +Y+A+ E+YG    L PLKA FPN  +KE++ASK EL PF      +AALD+I+C  
Sbjct: 231 DTSVYIATDEIYG--RELEPLKAEFPNLVTKESLASKEELAPFK--GGGLAALDYIICLH 286

Query: 407 SDIFVTNNNGNMAKILAG-RRYTCF 430
           +D+F+       +  +   RRY  F
Sbjct: 287 ADVFIGTCGSTFSAFVKRERRYLGF 311

This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese. Length = 315

>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 30/186 (16%)

Query: 246 RVNYHALSFTDSIQKMGEKLVHQMR-MKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKE 304
           R+    L F+  I+K+ ++ V ++  + G  Y+A+HLR                      
Sbjct: 43  RLVGKHLRFSPEIRKLADRFVRKLLGLPGGPYLAVHLRRGDF------------------ 84

Query: 305 LGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLMLRALGY-GSDVHIYVASGEVYGGEE 363
                                  +C L+  E+   ++ L        +YVA+ E    EE
Sbjct: 85  -------EVECCHLAKWMGEYLEECLLSAEEIAEKIKELMAERKLKVVYVATDE-ADREE 136

Query: 364 TLAPLKALFPNFYSKETIASKELEPFSSFSSR--MAALDFIVCDESDIFVTNNNGNMAKI 421
               L+       +K+ +                ++ +D  +C  +D+F+       +  
Sbjct: 137 LREELRKAGIRVVTKDDLLEDAELLELEKLDNYLLSLVDQEICSRADVFIGTGFSTFSSN 196

Query: 422 LAGRRY 427
           +A  R 
Sbjct: 197 VALLRR 202

O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	433
PF10250	351	O-FucT: GDP-fucose protein O-fucosyltransferase; I	100.0
KOG3849	386	consensus GDP-fucose protein O-fucosyltransferase	97.78
PF05830	321	NodZ: Nodulation protein Z (NodZ); InterPro: IPR00	97.19

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats

Probab=100.00  E-value=5.3e-56  Score=436.60  Aligned_cols=293  Identities=36%  Similarity=0.624  Sum_probs=203.7

Q ss_pred             eCCChhhHHHHHHHHHHHHHHhCCcEEeccCCCCccccCCCC-----CcccccHHHHHHHccccceecccCCccccCCCC
Q 013956          120 TSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASD-----FSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLT  194 (433)
Q Consensus       120 ~nGGLNqqR~~IcDaV~vARiLNATLVlP~l~~~s~W~D~S~-----F~dIFDvdhFI~sL~~dVrIVk~LP~~~~~~~~  194 (433)
                      +.||+||||.++++||++|++||+|||||.+.....|++.++     |+++||+++|++.++++|.+.+.+|........
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            889999999999999999999999999999999999999987     999999999999999999999999865432100


Q ss_pred             ------------------------------CccccCCC-CCChHHHHHhhhHhhhhc------ceEEEeccccccccc-C
Q 013956          195 ------------------------------PYHMRVPR-KCNEKCYQNRVLPVLLKR------HAVQLSKFDYRLANK-L  236 (433)
Q Consensus       195 ------------------------------~~~~~~p~-~~s~~yY~~~ilP~l~k~------~VI~l~~~~~rLa~~-l  236 (433)
                                                    ........ +..+.+|.++++|.+.++      +++.|.++...+.++ .
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence                                          11111222 567778888899999887      999999999998874 7


Q ss_pred             chhhhhhhhhccccccccchHHHHHHHHHHHHHHhcCCceEEEEeccchhhhhhhcccCCCChhHHHHHHHHHHHhhhhc
Q 013956          237 DTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLH  316 (433)
Q Consensus       237 p~eiQrLRCrvnf~ALrF~p~I~~lg~~lV~RmR~~s~pfiALHLR~E~DMLAfsgC~~g~~~~E~~eL~~~R~~wk~~~  316 (433)
                      +.++||        +|+|+++|+++|++++++|+..+++|||+|||+|+||  +++|.+++   ++..|..+|...  ++
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~~--~~  230 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCWG--KK  230 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH---GG
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC---chHHHHHhHhhc--cc
Confidence            888887        9999999999999999999955689999999999999  89999955   677788788652  23


Q ss_pred             CCCchhhhccCCCCCCHHHHHHHHHHhCCCCcceEEEEeccccCcccchhhHHhhCCCcccccccccc-cccCCCcccch
Q 013956          317 ISNPDKERRHGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASK-ELEPFSSFSSR  395 (433)
Q Consensus       317 ~~~~~~~R~~G~CPLtPeEvgl~L~alGf~~~T~IYlA~geiyGg~~~l~~L~~~FPnl~tKe~L~s~-EL~pF~~~ss~  395 (433)
                      .+++...+..|.||++|++++.+++++|+.+.|.||||++++|||.+.|++|++.||++++|+++.+. |+++|..  ++
T Consensus       231 ~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~  308 (351)
T PF10250_consen  231 SINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND--DQ  308 (351)
T ss_dssp             GTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-------S-
T ss_pred             cccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc--cc
Confidence            35777889999999999999999999999999999999999999999999999999999999999999 9999976  89


Q ss_pred             hhhhhhhhhcCCceeeecCCCchHHHhhcccccc
Q 013956          396 MAALDFIVCDESDIFVTNNNGNMAKILAGRRYTC  429 (433)
Q Consensus       396 ~AALDyiVc~~SDvFV~t~~Gnma~~v~G~Rr~~  429 (433)
                      +|+||++||++||+||+|..++|+..|.++|+|.
T Consensus       309 ~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~  342 (351)
T PF10250_consen  309 LAMVDQEICSRSDVFIGTCGSTFSSNIARERHYR  342 (351)
T ss_dssp             -HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHS
T ss_pred             hhHHHHHHHhcCCEEEecCcchhHHHhhcccCcC
Confidence            9999999999999999999888999999999885

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=0.00018  Score=72.32  Aligned_cols=281  Identities=20%  Similarity=0.250  Sum_probs=145.6

Q ss_pred             CCCCcEEEEE-eCCChhhHHHHHHHHHHHHHHhCCcEEeccCCC---CccccCCCCCcccccHHH------------HHH
Q 013956          110 THSNRYLAIV-TSGGLNQQRTGIIDAVVAARILNATLVIPKLDQ---KSFWKDASDFSEIFDVDR------------FIS  173 (433)
Q Consensus       110 ~~snGYl~V~-~nGGLNqqR~~IcDaV~vARiLNATLVlP~l~~---~s~W~D~S~F~dIFDvdh------------FI~  173 (433)
                      ...||||+.- |-|-+.+|-....-..+.|+.||.|||+|..-.   -.+-+-.-.|...|.++-            |+.
T Consensus        26 ~DP~GYl~yCPCMGRFGNQaDhFLGsLAFAKaLnRTL~lPpwiEy~~pe~~n~~vpf~~yF~vepl~~YhRVitm~dFm~  105 (386)
T KOG3849|consen   26 WDPAGYLLYCPCMGRFGNQADHFLGSLAFAKALNRTLVLPPWIEYKHPETKNLMVPFEFYFQVEPLAKYHRVITMQDFMK  105 (386)
T ss_pred             CCCCccEEEccccccccchHHHHHHHHHHHHHhcccccCCcchhccCCcccccccchhheeecccHhhhhhheeHHHHHH
Confidence            4579998876 999999999999999999999999999996433   122111237888887753            444


Q ss_pred             Hcccccee-----c-------ccCCccc---cCCCCCccccCCCCC-------ChHHH------HHhh---hHhh-----
Q 013956          174 VLSKDVKI-----I-------KQIPRKG---GKSLTPYHMRVPRKC-------NEKCY------QNRV---LPVL-----  217 (433)
Q Consensus       174 sL~~dVrI-----V-------k~LP~~~---~~~~~~~~~~~p~~~-------s~~yY------~~~i---lP~l-----  217 (433)
                      -|..+.=.     .       ..-|++-   .+-.+|+   =|.|-       .-+||      +++.   ...+     
T Consensus       106 klapthwp~~~Rva~c~k~a~qr~pdkp~Ch~KeGNPF---GPfWDqfhvsFv~sE~f~~i~Fd~~~~~~~~kW~~kfp~  182 (386)
T KOG3849|consen  106 KLAPTHWPGTPRVAICDKSAAQRSPDKPGCHSKEGNPF---GPFWDQFHVSFVGSEYFGDIGFDLNQMGSRKKWLEKFPS  182 (386)
T ss_pred             HhCcccCCCCcceeeeehhhhccCCCCCCCcccCCCCC---CCchhheEeeeeccccccccccchhhcchHHHHHhhCCc
Confidence            44333100     0       0001110   0000110   01110       01111      1111   1111     


Q ss_pred             hhcceEEEeccccccccc-CchhhhhhhhhccccccccchHHHHHHHHHHHHHHhcCCceEEEEeccchhhhhhhcccCC
Q 013956          218 LKRHAVQLSKFDYRLANK-LDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYG  296 (433)
Q Consensus       218 ~k~~VI~l~~~~~rLa~~-lp~eiQrLRCrvnf~ALrF~p~I~~lg~~lV~RmR~~s~pfiALHLR~E~DMLAfsgC~~g  296 (433)
                      ++|-|+.|++.-....-. ---.+||-        ||.+.+|.+.|++.+.--  ..+||+++|||--.||+--  |.+-
T Consensus       183 eeyPVLAf~gAPA~FPv~~e~~~lQkY--------l~WS~r~~e~~k~fI~a~--L~rpfvgiHLRng~DWvra--Cehi  250 (386)
T KOG3849|consen  183 EEYPVLAFSGAPAPFPVKGEVWSLQKY--------LRWSSRITEQAKKFISAN--LARPFVGIHLRNGADWVRA--CEHI  250 (386)
T ss_pred             ccCceeeecCCCCCCccccccccHHHH--------HHHHHHHHHHHHHHHHHh--cCcceeEEEeecCchHHHH--HHHh
Confidence            234566665532211100 00135654        788999999999876442  2469999999999999865  7653


Q ss_pred             CChhHHHHHHHHHHHhhhhcCCCchhhhccCCCCCCHHHHH----HHHHHhCCCCcceEEEEeccccCcccchhhHH-hh
Q 013956          297 GGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVG----LMLRALGYGSDVHIYVASGEVYGGEETLAPLK-AL  371 (433)
Q Consensus       297 ~~~~E~~eL~~~R~~wk~~~~~~~~~~R~~G~CPLtPeEvg----l~L~alGf~~~T~IYlA~geiyGg~~~l~~L~-~~  371 (433)
                      -...-+- |=+--+   -+..-+....-....|-=+-+|+-    +-.+.+|  .-..+|+|+..    +.-+..|. ++
T Consensus       251 kd~~~~h-lfASpQ---ClGy~~~~gaLt~e~C~Psk~~I~rqik~~v~si~--dakSVfVAsDs----~hmi~Eln~aL  320 (386)
T KOG3849|consen  251 KDTTNRH-LFASPQ---CLGYGHHLGALTKEICSPSKQQILRQIKEKVGSIG--DAKSVFVASDS----DHMIDELNEAL  320 (386)
T ss_pred             cccCCCc-cccChh---hccccccccccchhhhCccHHHHHHHHHHHHhhhc--ccceEEEeccc----hhhhHHHHHhh
Confidence            2210000 000000   000000000011224533334432    2333444  33459999876    33344443 34


Q ss_pred             CCCcccccccccccccCCCcccchhhhhhhhhhcCCceeeecCCCchHHHhhccc
Q 013956          372 FPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRR  426 (433)
Q Consensus       372 FPnl~tKe~L~s~EL~pF~~~ss~~AALDyiVc~~SDvFV~t~~Gnma~~v~G~R  426 (433)
                      +|-=+.-.     .|+|      --+-+|..|.-+||-||+|--++|+.+|.-.|
T Consensus       321 ~~~~i~vh-----~l~p------dd~y~dLaIlGqadhFiGNCvSsfsafvKRER  364 (386)
T KOG3849|consen  321 KPYEIEVH-----RLEP------DDMYTDLAILGQADHFIGNCVSSFSAFVKRER  364 (386)
T ss_pred             cccceeEE-----ecCc------ccchhhhhhhcccchhhhhhHHHHHHHHhhhh
Confidence            43211111     3333      34678999999999999998888877664433

>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation

Probab=97.19  E-value=0.006  Score=62.17  Aligned_cols=254  Identities=18%  Similarity=0.255  Sum_probs=121.4

Q ss_pred             CcEEEEEeCCChhhHHHHHHHHHHHHHHhCCcEEeccCCCCccccCC----CCCcccccHHHHHHHcc--ccceecccCC
Q 013956          113 NRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDA----SDFSEIFDVDRFISVLS--KDVKIIKQIP  186 (433)
Q Consensus       113 nGYl~V~~nGGLNqqR~~IcDaV~vARiLNATLVlP~l~~~s~W~D~----S~F~dIFDvdhFI~sL~--~dVrIVk~LP  186 (433)
                      +.|++.+--+|+|.-=-+++-|-.+|+-.|.||||-       |+++    ..|...|++  |-+-.+  ..|+|+-+=+
T Consensus         2 ~r~~~~r~r~g~gd~l~~la~aw~~a~~~~r~l~id-------w~~s~~~~~~f~n~f~~--ffepv~~i~~~~~~~~d~   72 (321)
T PF05830_consen    2 QRFVVSRRRTGLGDCLWSLAAAWRYAKRTGRTLVID-------WRGSCYLDQPFTNAFPV--FFEPVEDIAGVRVICDDR   72 (321)
T ss_dssp             --EEEEE--S-HHHHHHHHHHHHHHHHHHT-EEEEE--------BT-TT-SSTTSBSHHH--HB---SEETTEEEE-SGG
T ss_pred             CceEEEeccCCchhHHHHHHHHHHHHHHhCCeEEEE-------cCCceecCCcccccCCc--ccchhhhhcCceeEecch
Confidence            579999999999999999999999999999999995       7775    366666654  444433  2344441111


Q ss_pred             ccccCCCCCccccCCCCCC-hH---------HHH---HhhhHhhhh------cceEEEecccccccccCchhhhhhhhhc
Q 013956          187 RKGGKSLTPYHMRVPRKCN-EK---------CYQ---NRVLPVLLK------RHAVQLSKFDYRLANKLDTDLQKLRCRV  247 (433)
Q Consensus       187 ~~~~~~~~~~~~~~p~~~s-~~---------yY~---~~ilP~l~k------~~VI~l~~~~~rLa~~lp~eiQrLRCrv  247 (433)
                        +.....+-. -.|.||. |.         +..   +++--++.-      ..||...-...    .=..++.  ||- 
T Consensus        73 --i~~~~~~g~-~fp~~w~~p~~~~~~~pd~qi~re~d~l~~lf~~~~d~~a~~vv~d~c~~~----~c~~~ae--R~i-  142 (321)
T PF05830_consen   73 --INQFSFPGP-FFPAWWNKPSIDCVYRPDEQIFRERDELRQLFQSQEDHEANTVVCDACLMW----RCDEEAE--REI-  142 (321)
T ss_dssp             --GGT----SS-EESGGGGS-GGGGS---HHHHHHHHHHHHHHHHSSS--S-SEEEE-S--TT----SS-HHHH--HHH-
T ss_pred             --hhhhcCCCC-cChhHHhCCCcceecCChHHHhhhhHHHHHHhhcccccccchhhhHhhcCC----cchhHHH--HHH-
Confidence              100000000 0233332 11         111   112222221      23444332211    1123333  333 


Q ss_pred             cccccccchHHHHHHHHHHHHHHhcCCceEEEEeccc--hhhhhhhcccCCCChhHHHHHHHHHHHhhhhcCCCchhhhc
Q 013956          248 NYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFE--PDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERR  325 (433)
Q Consensus       248 nf~ALrF~p~I~~lg~~lV~RmR~~s~pfiALHLR~E--~DMLAfsgC~~g~~~~E~~eL~~~R~~wk~~~~~~~~~~R~  325 (433)
                       |..|+-+++|++..+.+.+.-=. +..=|++|.|.=  +|.+.+ +|++   .+++.-|.++.                
T Consensus       143 -f~slkpR~eIqarID~iy~ehf~-g~~~IGVHVRhGngeD~~~h-~~~~---~D~e~~L~~V~----------------  200 (321)
T PF05830_consen  143 -FSSLKPRPEIQARIDAIYREHFA-GYSVIGVHVRHGNGEDIMDH-APYW---ADEERALRQVC----------------  200 (321)
T ss_dssp             -HHHS-B-HHHHHHHHHHHHHHTT-TSEEEEEEE-------------------HHHHHHHHHHH----------------
T ss_pred             -HHhCCCCHHHHHHHHHHHHHHcC-CCceEEEEEeccCCcchhcc-Cccc---cCchHHHHHHH----------------
Confidence             88999999999999887755422 346899999931  122222 2222   11111111111                


Q ss_pred             cCCCCCCHHHHHHHHHHhCCCCcceEEEEeccccCcccchhhHHhhCCCcccccccccc-cccCCCc-----ccchhhhh
Q 013956          326 HGKCPLTPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSKETIASK-ELEPFSS-----FSSRMAAL  399 (433)
Q Consensus       326 ~G~CPLtPeEvgl~L~alGf~~~T~IYlA~geiyGg~~~l~~L~~~FPnl~tKe~L~s~-EL~pF~~-----~ss~~AAL  399 (433)
                               .....++++-...++.|+||+-.    .+.++-+++.||.+++-++=... .-.+..+     ..-..|-+
T Consensus       201 ---------~ai~~ak~~~~~k~~~IFLATDS----aeVid~fr~~FPdiiti~k~F~~~~~g~Lhs~~~g~~gg~~ALI  267 (321)
T PF05830_consen  201 ---------TAIDKAKALAPPKPVRIFLATDS----AEVIDQFRKKFPDIITIPKQFPASQAGPLHSAAVGIEGGESALI  267 (321)
T ss_dssp             ---------HHHHHHHTS--SS-EEEEEEES-----HHHHHHHHHHSTTEE----------------HHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHhccCCCCeeEEEecCc----HHHHHHHHHHCCCeEEcccccCCCCCCcCcccccccchHHHHHH
Confidence                     01122344555678899999998    67899999999999887554433 2222221     12236889


Q ss_pred             hhhhhcCCceee-ecCCCchHH
Q 013956          400 DFIVCDESDIFV-TNNNGNMAK  420 (433)
Q Consensus       400 DyiVc~~SDvFV-~t~~Gnma~  420 (433)
                      |-+..+.+|+-| .+-.+.|.+
T Consensus       268 DM~LLSrCD~LIr~~ptS~Fsr  289 (321)
T PF05830_consen  268 DMYLLSRCDYLIRFPPTSAFSR  289 (321)
T ss_dssp             HHHHHTTSSEEEEESTT-GGGH
T ss_pred             HHHHHHhCCeEEEcCCCchhhh
Confidence            999999999999 566666644

NodZ is required for the addition of a 2-O-methylfucose residue to the terminal reducing N-acetylglucosamine of the nodulation signal. This substitution is essential for the biological activity of this molecule. Mutations in nodZ result in defective nodulation. nodZ represents a unique nodulation gene that is not under the control of NodD and yet is essential for the synthesis of an active nodulation signal [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3SIX_A 2HLH_A 2HHC_A 3SIW_A 2OCX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	433
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
3zy2_A	362	Putative GDP-fucose protein O-fucosyltransferase;	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 65/422 (15%), Positives = 124/422 (29%), Gaps = 114/422 (27%)

Query: 8   QHHNH--------QHRLRVVVPIISSVFSALLILFALLSFLAP--SPSDTDH-LHHPRRF 56
            HH+H        Q++ + ++ +    F        +        S  + DH +      
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 57  TSTDNV------DGPTGVPVF----------------RVQRDGGKLDRDIWSSRNAQFYH 94
           + T  +           V  F                + ++    +   ++  +  + Y+
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121

Query: 95  GCSIASSKFAKAGDVTHSNRYLAIVTSGGLNQQR--TGII--------DAVVAARILNAT 144
                +  FAK  +V+    YL +     L + R    ++           VA  +  + 
Sbjct: 122 D----NQVFAK-YNVSRLQPYLKLRQ--ALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174

Query: 145 LVIPKLDQKSFWKDASDFSEIFDVDRFISVLSKDVKIIKQIPRKGGKSLTPYHMRVPRKC 204
            V  K+D K FW    +       +   +VL    K++ QI      S + +   +  + 
Sbjct: 175 KVQCKMDFKIFW---LNLKNCNSPE---TVLEMLQKLLYQI-DPNWTSRSDHSSNIKLRI 227

Query: 205 NE-----------KCYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHAL- 252
           +            K Y+N  L VL   + VQ    + +  N  +     L C++    L 
Sbjct: 228 HSIQAELRRLLKSKPYEN-CLLVL--LN-VQ----NAKAWNAFN-----LSCKI----LL 270

Query: 253 -----SFTDSIQKMGEK---LVHQMRM----KGKHYIALHLRFEPDMLAFSGCYYGGGD- 299
                  TD +         L H        + K  +  +L   P  L          + 
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL---TTNP 327

Query: 300 -------KERKELGAIRKRWKTLHISNPDKERRHGKC--PLTPLEVGLMLRALG-YGSDV 349
                  +  ++  A    WK  H++              L P E   M   L  +    
Sbjct: 328 RRLSIIAESIRDGLATWDNWK--HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 350 HI 351
           HI
Sbjct: 386 HI 387

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 4e-06
 Identities = 51/376 (13%), Positives = 113/376 (30%), Gaps = 104/376 (27%)

Query: 80  LDRDIWSSRNAQ-FYHGCSI-ASSKFAKAGDVTHSNRYLAIV---TSGGLNQQRT-GIID 133
           L  ++ +++    F   C I  +++F +  D   +     I     S  L       ++ 
Sbjct: 250 LL-NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL- 307

Query: 134 AVVAARILN---------ATLVIPKL---------DQKSFWKDASDFSEIFDVDRFISVL 175
                + L+              P+          D  + W    D  +  + D+  +++
Sbjct: 308 ----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW----DNWKHVNCDKLTTII 359

Query: 176 SKDVKIIKQIP---RKGGKSLT--PYHMRVPRKCNEKCYQNRVLPVL---LKRHAVQ--L 225
              + +++  P   RK    L+  P    +P           +L ++   + +  V   +
Sbjct: 360 ESSLNVLE--PAEYRKMFDRLSVFPPSAHIPTI---------LLSLIWFDVIKSDVMVVV 408

Query: 226 SKF-DYRLANKLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFE 284
           +K   Y L  K     ++        ++     ++   E  +H+  +   HY  +   F+
Sbjct: 409 NKLHKYSLVEK---QPKESTIS--IPSIYLELKVKLENEYALHRSIV--DHY-NIPKTFD 460

Query: 285 PDMLA---FSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPLTPLEVGLM-- 339
            D L        +Y         +G         H+ N +   R     +  L+   +  
Sbjct: 461 SDDLIPPYLDQYFY-------SHIG--------HHLKNIEHPERMTLFRMVFLDFRFLEQ 505

Query: 340 -LRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNFYSK-----ETIASKELEPFSSFS 393
            +R            A         TL  LK     FY       +    + +     F 
Sbjct: 506 KIRHDST--------AWNASGSILNTLQQLK-----FYKPYICDNDPKYERLVNAILDFL 552

Query: 394 SRMAALDFIVCDESDI 409
            ++   + I    +D+
Sbjct: 553 PKIEE-NLICSKYTDL 567

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362

 Score = 45.5 bits (107), Expect = 2e-05
 Identities = 43/337 (12%), Positives = 92/337 (27%), Gaps = 66/337 (19%)

Query: 121 SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDAS-DFSEIFDVD---RFISVLS 176
            G    Q    +  +  A+ L+ TLV+P   +    +     F  +F V    ++  V++
Sbjct: 17  MGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKHPETKMIPFEFLFQVGTVAKYTRVVT 76

Query: 177 -----------------------------KDVKIIKQIPRKGGKSLTPYHMRVPRKCNEK 207
                                         D         K G    PY  ++       
Sbjct: 77  MQEFTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSKEGNPFGPYWDQIDVSFVGD 136

Query: 208 CYQNRVLPVLLKRHAVQLSKFDYRLANKLDTDLQKLRCRVNYHA----------LSFTDS 257
            Y   +             K+  +  ++    L        + +          L ++  
Sbjct: 137 EYFGDIPGGFDLNQMGSRKKWLEKFPSEEYPVLAFSSAPAPFPSKGKVWSIQKYLRWSSR 196

Query: 258 IQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHI 317
           I +  +K +       K ++A+HLR + D +    C       +      +    + L  
Sbjct: 197 ITEQAKKFISANL--AKPFVAVHLRNDADWV--RVC----EHIDTTTNRPLFASEQCLGE 248

Query: 318 SNPDKERRHGKCPLTPLEVGLMLRALGYGSDVH-IYVASGEVYGGEETLAPLKALFPNFY 376
            +         C  +  ++   +           ++VAS + +  +E    LK      +
Sbjct: 249 GHHLGTLTKEICSPSKQQILEQIVEKVGSIGAKSVFVASDKDHMIDEINEALKPYEIEAH 308

Query: 377 SKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTN 413
            +E                       +   +D+FV N
Sbjct: 309 RQE--------------PDDMYTSLAIMGRADLFVGN 331

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	433
4ap5_A	408	GDP-fucose protein O-fucosyltransferase 2; GT-B, G	99.49
3zy2_A	362	Putative GDP-fucose protein O-fucosyltransferase;	99.21
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	97.83
2hhc_A	330	NODZ, nodulation fucosyltransferase NODZ; glycosyl	97.66

>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*

Probab=99.49  E-value=3.7e-13  Score=135.97  Aligned_cols=287  Identities=18%  Similarity=0.255  Sum_probs=153.1

Q ss_pred             CCCcEEEEEeC-C-ChhhHHHHHHHHHHHHHHhCCc----EEeccCCCCccccCC------CCCcccccHHHHHHHcccc
Q 013956          111 HSNRYLAIVTS-G-GLNQQRTGIIDAVVAARILNAT----LVIPKLDQKSFWKDA------SDFSEIFDVDRFISVLSKD  178 (433)
Q Consensus       111 ~snGYl~V~~n-G-GLNqqR~~IcDaV~vARiLNAT----LVlP~l~~~s~W~D~------S~F~dIFDvdhFI~sL~~d  178 (433)
                      ..++||+-..| | |.|+||...-.|.+.|+.||.|    ||||-...---|+-.      -.|++.||++.+    +..
T Consensus        20 ~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~~   95 (408)
T 4ap5_A           20 SRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NKN   95 (408)
T ss_dssp             CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HTT
T ss_pred             cccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hhh
Confidence            46899998864 5 8999999999999999999999    999966543345443      269999999864    345


Q ss_pred             ceec------ccC-Ccc----c-----c-C--CC---CCcccc-----CCC-CC------ChHH----------------
Q 013956          179 VKII------KQI-PRK----G-----G-K--SL---TPYHMR-----VPR-KC------NEKC----------------  208 (433)
Q Consensus       179 VrIV------k~L-P~~----~-----~-~--~~---~~~~~~-----~p~-~~------s~~y----------------  208 (433)
                      |+||      +++ |..    +     . .  ..   .....+     .+. ..      .+.|                
T Consensus        96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~~~~~~c~~~~  175 (408)
T 4ap5_A           96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQ  175 (408)
T ss_dssp             SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCEEEEEEEEEEC
T ss_pred             CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccccCCceeEEEe
Confidence            5554      222 100    0     0 0  00   000000     000 00      0001                


Q ss_pred             -HHHhhhHhhhhcc---eEEEecccccccccC-chhhhhhhhhccccccccchHHHHHHHHHHHHHHhcCCceEEEEecc
Q 013956          209 -YQNRVLPVLLKRH---AVQLSKFDYRLANKL-DTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRF  283 (433)
Q Consensus       209 -Y~~~ilP~l~k~~---VI~l~~~~~rLa~~l-p~eiQrLRCrvnf~ALrF~p~I~~lg~~lV~RmR~~s~pfiALHLR~  283 (433)
                       ....+.|.+.+..   -+-+..+...|.+.. ..+...+|     ..|+|++.|.++|++.++..-.  ++|+++|+|.
T Consensus       176 ~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~-----r~l~~s~~l~~~a~~fi~~~L~--~~~~~~h~r~  248 (408)
T 4ap5_A          176 GSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTR-----RSMVFARHLREVGDEFRSRHLN--STDDADRIPF  248 (408)
T ss_dssp             SBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHH-----HTCCBCHHHHHHHHHHHHHHHC--CCTTTTTCCC
T ss_pred             ecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHH-----HHhhhhHHHHHHHHHHHHHHhC--cccceeeccc
Confidence             0011223332221   112222222233221 12322332     3799999999999998876542  3666666666


Q ss_pred             chhhhhhhcccCCCChhHHHHHHHHHHHhhhhcCCCchhhhccCCC-CCCHHH---HHHHHHHhCCCCcceEEEEecccc
Q 013956          284 EPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKC-PLTPLE---VGLMLRALGYGSDVHIYVASGEVY  359 (433)
Q Consensus       284 E~DMLAfsgC~~g~~~~E~~eL~~~R~~wk~~~~~~~~~~R~~G~C-PLtPeE---vgl~L~alGf~~~T~IYlA~geiy  359 (433)
                      +.|+...  |.......-.        .....|.-..+-......| |-.++-   +..+++..   +-+.||||+-+  
T Consensus       249 ~~dw~~~--~~~~~~~~~~--------~y~~~H~Rr~d~~~~~~~~~ps~~~~~~~i~~~~~~~---~~~~VyiATD~--  313 (408)
T 4ap5_A          249 QEDWMKM--KVKLGSALGG--------PYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTH---RLDKVFVATDA--  313 (408)
T ss_dssp             CSSGGGC--CCCTTCBCCE--------EEEEEEECCTTTTTTTCSSSCCHHHHHHHHHHHHHHH---TCSCEEEEECC--
T ss_pred             chhHhhh--hcccccccCC--------CccccccccccchhhhhccCCCHHHHHHHHHHHHHhc---CCCEEEEeCCC--
Confidence            6665543  3221110000        0000000000000111122 222222   22333333   33459999876  


Q ss_pred             CcccchhhHHhhCCCcccccccccccccCCCcccchhhhhhhhhhcCCceeeecCCCchHHHhhcccc
Q 013956          360 GGEETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRRY  427 (433)
Q Consensus       360 Gg~~~l~~L~~~FPnl~tKe~L~s~EL~pF~~~ss~~AALDyiVc~~SDvFV~t~~Gnma~~v~G~Rr  427 (433)
                       .+..+..|++.+|.++.-..-.. ++.++  .....|.||-+||.+||+||+|..++|+..|.=.|-
T Consensus       314 -~~~~~~~l~~~~~~~~~~~~~~~-~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~  377 (408)
T 4ap5_A          314 -VRKEYEELKKLLPEMVRFEPTWE-ELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEERE  377 (408)
T ss_dssp             -CHHHHHHHHHHCTTEECCCCCHH-HHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHH
T ss_pred             -chhHHHHHHHhCCCcEEecCcch-hhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHHHHH
Confidence             45557889999987654322111 44443  234679999999999999999999999877765553

>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*

Probab=99.21  E-value=2.5e-10  Score=115.15  Aligned_cols=270  Identities=17%  Similarity=0.274  Sum_probs=152.6

Q ss_pred             CCCcEEEEE-eCCChhhHHHHHHHHHHHHHHhCCcEEeccCCCCccccCCC---CCcccccHHH------------HHHH
Q 013956          111 HSNRYLAIV-TSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDAS---DFSEIFDVDR------------FISV  174 (433)
Q Consensus       111 ~snGYl~V~-~nGGLNqqR~~IcDaV~vARiLNATLVlP~l~~~s~W~D~S---~F~dIFDvdh------------FI~s  174 (433)
                      .+||||+-= |-|-+.||-....-+.+.|+.||.|||||-+-.-.. . .+   .|++-|+++.            |++.
T Consensus         6 d~~Gyi~yCPCMGRFGNQadhfLG~LafAk~lnRTLvlPpwi~y~~-~-~~~~vpf~~yF~v~~l~~yhrvi~me~Fm~~   83 (362)
T 3zy2_A            6 DPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKH-P-ETKMIPFEFLFQVGTVAKYTRVVTMQEFTKK   83 (362)
T ss_dssp             CTTCEEEECCCSSSHHHHHHHHHHHHHHHHHHTCEEECCCEEECSS-S-SCEEECHHHHBCHHHHTTTSCEECHHHHHHH
T ss_pred             CCCccEEeCCCcCccccHHHHHHHHHHHHHhhCceEecCccccccC-C-cccccchhheeecchhhhhceeeeHHHHHHH
Confidence            469999875 999999999999999999999999999997653222 1 13   5888888765            3333


Q ss_pred             ccccc-------------ee-------cccCCccccCCCCCc-------cccC-------C--C--CCChHHHHHhhhHh
Q 013956          175 LSKDV-------------KI-------IKQIPRKGGKSLTPY-------HMRV-------P--R--KCNEKCYQNRVLPV  216 (433)
Q Consensus       175 L~~dV-------------rI-------Vk~LP~~~~~~~~~~-------~~~~-------p--~--~~s~~yY~~~ilP~  216 (433)
                      |...|             +-       -+.+|..-   .+|+       .+.-       |  .  .-+...|.++=...
T Consensus        84 lap~~WP~~~R~~~C~~~~~~~~~~~~~~~C~~K~---GNPFgpfWd~f~v~F~~se~~~~~~~~l~~~~~~~~~~W~~~  160 (362)
T 3zy2_A           84 IMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSKE---GNPFGPYWDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLEK  160 (362)
T ss_dssp             THHHHSCGGGCEEEESSCBC-------CCBCCTTS---STTHHHHHHHTTCCCCEEEECTTSTTTTCC-------CHHHH
T ss_pred             hccccCCcccceEeeccccccccCCCCCCCCCCCC---CCCCCcchhccccccccceeccCccccccccchhHHHHHHHh
Confidence            33111             00       01122110   0110       0000       0  0  00001111111111


Q ss_pred             --hhhcceEEEecccccccc-cCchhhhhhhhhccccccccchHHHHHHHHHHHHHHhcCCceEEEEeccchhhhhhhcc
Q 013956          217 --LLKRHAVQLSKFDYRLAN-KLDTDLQKLRCRVNYHALSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGC  293 (433)
Q Consensus       217 --l~k~~VI~l~~~~~rLa~-~lp~eiQrLRCrvnf~ALrF~p~I~~lg~~lV~RmR~~s~pfiALHLR~E~DMLAfsgC  293 (433)
                        -.+|-|+.|++.-..-.- .-...+||        -|+++++|.+.|++.++.--  .+||||+|||-=.|+.-.  |
T Consensus       161 ~p~~~~pVlAf~gaPa~FPv~~e~r~Lqk--------Ym~WS~~i~~~a~~fI~~~L--~rpyVgIHLR~G~DW~~a--C  228 (362)
T 3zy2_A          161 FPSEEYPVLAFSSAPAPFPSKGKVWSIQK--------YLRWSSRITEQAKKFISANL--AKPFVAVHLRNDADWVRV--C  228 (362)
T ss_dssp             SCTTTCSEEEESSCSSCSSCCGGGGGGGG--------GCCBCHHHHHHHHHHHHHHC--CSSEEEEEECCCHHHHHH--H
T ss_pred             CCcccCceEeecCCCCCCCcChhhHhHHH--------hccccHHHHHHHHHHHHHhc--CCCeEEEEEecCCcHHHH--H
Confidence              125577777764222110 00123444        48999999999999887743  369999999999999876  8


Q ss_pred             cCCCChhHHHHHHHHHHHhhhhcCCCch---hhhccC-----CCCCCHHH----HHHHHHHhCCCCcceEEEEeccccCc
Q 013956          294 YYGGGDKERKELGAIRKRWKTLHISNPD---KERRHG-----KCPLTPLE----VGLMLRALGYGSDVHIYVASGEVYGG  361 (433)
Q Consensus       294 ~~g~~~~E~~eL~~~R~~wk~~~~~~~~---~~R~~G-----~CPLtPeE----vgl~L~alGf~~~T~IYlA~geiyGg  361 (433)
                      .+.-.. +      ..    . ...++.   -....|     .|==+.++    +..+++.++.+   .||||+-.    
T Consensus       229 ~hlk~~-~------~~----~-lfaSPQC~Gy~~~~~~lt~emClPSle~I~rqIk~~vk~~~lk---sVFIATDa----  289 (362)
T 3zy2_A          229 EHIDTT-T------NR----P-LFASEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSIGAK---SVFVASDK----  289 (362)
T ss_dssp             HTCCTT-T------CC----C-CTTTHHHHCGGGTTCCCCHHHHSCCHHHHHHHHHHHHHHHTCS---EEEEEESS----
T ss_pred             hhhccc-c------Cc----c-cccCCcccCCcccCcccchhccCCCHHHHHHHHHHHHHhcCCc---EEEEecCC----
Confidence            762210 0      00    0 000000   000111     23223333    44556666644   59999976    


Q ss_pred             ccchhhHHhhCCCcccccccccccccCCCcccchhhhhhhhhhcCCceeeecCCCchHHHhhccc
Q 013956          362 EETLAPLKALFPNFYSKETIASKELEPFSSFSSRMAALDFIVCDESDIFVTNNNGNMAKILAGRR  426 (433)
Q Consensus       362 ~~~l~~L~~~FPnl~tKe~L~s~EL~pF~~~ss~~AALDyiVc~~SDvFV~t~~Gnma~~v~G~R  426 (433)
                      ...++-|+++|+..-.  .+ . -+.|      -.|+||.+||.+||+||+|..++|.-.|.=.|
T Consensus       290 ~~~~~ELk~~L~~~~v--~v-v-~~~p------e~a~ID~~I~~~A~~FIGN~~SSFSa~I~rER  344 (362)
T 3zy2_A          290 DHMIDEINEALKPYEI--EA-H-RQEP------DDMYTSLAIMGRADLFVGNCVSTFSHIVKRER  344 (362)
T ss_dssp             CCCHHHHHHHHGGGTC--CE-E-CCSS------CCHHHHHHHHHHSSEEEECTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCc--eE-E-EeCC------chhHHHHHHHHhCCEeecCccccccHHHHHHH
Confidence            4467888888764210  01 1 1112      17999999999999999999999866554433

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=97.83  E-value=0.0018  Score=68.41  Aligned_cols=248  Identities=15%  Similarity=0.182  Sum_probs=138.7

Q ss_pred             CcEEEEEe--CCChhhHHHHHHHHHHHHHHhCCcEEeccCCCCccccCC-CCCcccccHHHHHHHccccceecccCCccc
Q 013956          113 NRYLAIVT--SGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDA-SDFSEIFDVDRFISVLSKDVKIIKQIPRKG  189 (433)
Q Consensus       113 nGYl~V~~--nGGLNqqR~~IcDaV~vARiLNATLVlP~l~~~s~W~D~-S~F~dIFDvdhFI~sL~~dVrIVk~LP~~~  189 (433)
                      ..||+...  ..|+..+-..++-|..+|..+|.|||+-.=.    |.-. ..|+++|..      +...+.-  . |.. 
T Consensus       145 aK~Lv~~~~~~~GfGs~lh~l~~~L~~A~~~~Rtliidd~~----w~Y~~g~w~~yF~P------~s~~C~~--~-~~~-  210 (526)
T 2de0_X          145 AKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQN----WRYATGGWETVFRP------VSETCTD--R-SGI-  210 (526)
T ss_dssp             SCEEEEECCCSSCHHHHHHHHHHHHHHHHHHTCEEEEECTT----CSSCTTCGGGTBCC------SCSSCCC--C-CCS-
T ss_pred             CCEEEEEecCCCchHHHHHHHHHHHHHHHhhCCEEEEECCC----CCcCCCCHHHhhhC------cCccccC--C-Ccc-
Confidence            47898886  5799999999999999999999999995432    3322 467777774      1111110  0 100 


Q ss_pred             cCCCCCccccCCCCCChHHHHHhhhHhhhhcceEEEecccc--c---ccc-cCchh----hhhhhh--------hccccc
Q 013956          190 GKSLTPYHMRVPRKCNEKCYQNRVLPVLLKRHAVQLSKFDY--R---LAN-KLDTD----LQKLRC--------RVNYHA  251 (433)
Q Consensus       190 ~~~~~~~~~~~p~~~s~~yY~~~ilP~l~k~~VI~l~~~~~--r---La~-~lp~e----iQrLRC--------rvnf~A  251 (433)
                               ....|-....        -..+.||.+...++  +   ... .+|.+    ++++.-        .+.-.-
T Consensus       211 ---------~~~~w~~~~~--------~~~~~vV~~~~i~~~~~~~~~~~~~~P~~~~~~L~~l~~dp~~w~~~q~~~yl  273 (526)
T 2de0_X          211 ---------STGHWSGEVK--------DKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYL  273 (526)
T ss_dssp             ---------CCCBCCCTTG--------GGGCSEEEECCGGGCSSCCSCCTTCEEGGGHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred             ---------ccCCCCCccc--------CCCcceEEeeccccccccccccccccchhHHHHHHhccCCcHHHHHHHHHHHH
Confidence                     0000111000        12345554433221  1   111 33433    333321        011124


Q ss_pred             cccchHHHHHHHHHHHHHHhcCCceEEEEeccchhhhhhhcccCCCChhHHHHHHHHHHHhhhhcCCCchhhhccCCCCC
Q 013956          252 LSFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKERKELGAIRKRWKTLHISNPDKERRHGKCPL  331 (433)
Q Consensus       252 LrF~p~I~~lg~~lV~RmR~~s~pfiALHLR~E~DMLAfsgC~~g~~~~E~~eL~~~R~~wk~~~~~~~~~~R~~G~CPL  331 (433)
                      +|++++|++..+++.+.+.- ++|.|++|.|-= |-++..   ....+. .+-+..+.+.+.                  
T Consensus       274 ~rP~~~i~~~I~~~~~~l~~-~~piVGVHIRrG-Dk~~~E---~~~~~~-~~Y~~~v~~~~~------------------  329 (526)
T 2de0_X          274 IRPQPWLEKEIEEATKKLGF-KHPVIGVHVRRT-DKVGTE---AAFHPI-EEYMVHVEEHFQ------------------  329 (526)
T ss_dssp             TCBCHHHHHHHHHHHHHHTC-CSSEEEEEECCC------C---CCSCSH-HHHHHHHHHHHH------------------
T ss_pred             cCCCHHHHHHHHHHHHHhCC-CCCEEEEEEeCC-CCCccc---cccCCH-HHHHHHHHHHHH------------------
Confidence            89999999999888888754 589999999964 443211   111111 111111111111                  


Q ss_pred             CHHHHHHHHHHhCCCCcceEEEEeccccCcccchhhHHhhCCCc--ccccccccc-cc-cCCCcccchhhhhhhhhhcCC
Q 013956          332 TPLEVGLMLRALGYGSDVHIYVASGEVYGGEETLAPLKALFPNF--YSKETIASK-EL-EPFSSFSSRMAALDFIVCDES  407 (433)
Q Consensus       332 tPeEvgl~L~alGf~~~T~IYlA~geiyGg~~~l~~L~~~FPnl--~tKe~L~s~-EL-~pF~~~ss~~AALDyiVc~~S  407 (433)
                             .|+.......+.||||+.+    ...++.+++.||+.  ++-...... .+ ..+...+-..+.+|.++.++|
T Consensus       330 -------~l~~~~~~~~~~ifLATDD----p~v~~e~k~~~p~~~~~~d~~~~~~a~~~~R~s~~~l~~~l~DL~lLs~c  398 (526)
T 2de0_X          330 -------LLARRMQVDKKRVYLATDD----PSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQA  398 (526)
T ss_dssp             -------HHHTTSCCSSCEEEEEESC----HHHHHHHHHHCTTSEEECCCCSSCSSGGGGGTCCTHHHHHHHHHHHHHHS
T ss_pred             -------HHHhhcCCCCCeEEEEcCC----HHHHHHHHHhCCCCEEecCcccccccCccccccHHHHHHHHHHHHHHhcC
Confidence                   1222245778899999998    56678888889985  322211111 11 111112235689999999999


Q ss_pred             ceeeecCCCchHHHhhccc
Q 013956          408 DIFVTNNNGNMAKILAGRR  426 (433)
Q Consensus       408 DvFV~t~~Gnma~~v~G~R  426 (433)
                      |+||+|.++|+++++...+
T Consensus       399 d~~Vgt~sS~~srla~~l~  417 (526)
T 2de0_X          399 DFLVCTFSSQVCRVAYEIM  417 (526)
T ss_dssp             SEEEECTTSHHHHHHHHHH
T ss_pred             CeeecCCCCHHHHHHHHHh
Confidence            9999999999988766543

>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*

Probab=97.66  E-value=0.0022  Score=62.35  Aligned_cols=260  Identities=14%  Similarity=0.146  Sum_probs=123.6

Q ss_pred             CCcEEEEEeCCChhhHHHHHHHHHHHHHHhCCcEEeccCCCCccccCCCCCcccccHHHHHHHccc--cceeccc-CCcc
Q 013956          112 SNRYLAIVTSGGLNQQRTGIIDAVVAARILNATLVIPKLDQKSFWKDASDFSEIFDVDRFISVLSK--DVKIIKQ-IPRK  188 (433)
Q Consensus       112 snGYl~V~~nGGLNqqR~~IcDaV~vARiLNATLVlP~l~~~s~W~D~S~F~dIFDvdhFI~sL~~--dVrIVk~-LP~~  188 (433)
                      +.+||++...|||.+|=-+++.|.++|...|.+|+|--.. ..|-.  ..|.+.| +..|. ....  ...+... .|..
T Consensus         3 ~~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r~l~vd~~~-~~y~~--~~~~~~f-p~~F~-~v~~~~~~~~~~~~~~~~   77 (330)
T 2hhc_A            3 KERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRG-SCYVE--QPFSNAF-PAFFE-PVEDIAGVPVICDDRVNQ   77 (330)
T ss_dssp             CCCEEEEECCSCHHHHHHHHHHHHHHHHHHTCEEEEECBT-CTTCS--STTSBSH-HHHBC-CCSEETTEEEECSGGGGT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHHHHHHhCCEEEEECCC-cccCC--CCccccC-ccccc-chhhhcccceeccccccc
Confidence            4579999999999999999999999999999998886444 23321  2355556 22232 1110  0000000 0100


Q ss_pred             ccCCCCCccccCCCCCC-h---HHH--HHhhhH-------hhh--hc-ceEEEecccccccccCchhhhhhhhhcccccc
Q 013956          189 GGKSLTPYHMRVPRKCN-E---KCY--QNRVLP-------VLL--KR-HAVQLSKFDYRLANKLDTDLQKLRCRVNYHAL  252 (433)
Q Consensus       189 ~~~~~~~~~~~~p~~~s-~---~yY--~~~ilP-------~l~--k~-~VI~l~~~~~rLa~~lp~eiQrLRCrvnf~AL  252 (433)
                      . +. ..+.  .|..+. .   ..|  .+++.|       ++.  .+ ....+.+. ..+-...-.+    .-..-|.-|
T Consensus        78 ~-~~-~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-~~~~w~~~~~----~~~~i~~yl  148 (330)
T 2hhc_A           78 L-SF-PGPF--FPRWWNRPSIDCINRPDEQIFRERDELTELFQAREDSEANTIVCD-ACLMWRCSEE----AERLIFRNI  148 (330)
T ss_dssp             C-CC-CSSE--ESGGGGSCGGGGSCCCHHHHHHHHHHHHHHHHSSSCCSCSEEEEC-SCCTTSSCHH----HHHHHHHHS
T ss_pred             c-cC-CCCc--CchhhhccccccccChHHhhhhhhhhhhhhhhhhhccCCCeEEcc-cccccchhhh----hHHHHHhcC
Confidence            0 00 0000  000000 0   001  122221       111  11 00112210 0010011111    112224678


Q ss_pred             ccchHHHHHHHHHHHHHHhcCCceEEEEeccchhhhhhhcccCCCChhHH-HHHHHHHHHhhhhcCCCchhhhccCCCCC
Q 013956          253 SFTDSIQKMGEKLVHQMRMKGKHYIALHLRFEPDMLAFSGCYYGGGDKER-KELGAIRKRWKTLHISNPDKERRHGKCPL  331 (433)
Q Consensus       253 rF~p~I~~lg~~lV~RmR~~s~pfiALHLR~E~DMLAfsgC~~g~~~~E~-~eL~~~R~~wk~~~~~~~~~~R~~G~CPL  331 (433)
                      +++++|++..+++.+.+-. +.++|++|.|.=.+.   ..|.++..-++. .-++.+.+                     
T Consensus       149 ~p~~~i~~~i~~~~~~~~~-~~~~VGVHIRrgD~~---~~~~~~~~~~~~~~~l~~~~~---------------------  203 (330)
T 2hhc_A          149 KLRSEIRARIDALYEEHFS-GHSIIGVHVRHGNGE---DIMEHAPYWADSELALHQVCM---------------------  203 (330)
T ss_dssp             CBCHHHHHHHHHHHHHHTT-TSEEEEEEECC---------------CHHHHHHHHHHHH---------------------
T ss_pred             CccHHHHHHHHHHHHHhcc-CCceEEEEEecCCCC---cccccCcchHHHhHHHHHHHH---------------------
Confidence            9999999998888765322 369999999964321   123221100010 00111111                     


Q ss_pred             CHHHHHHHHHHh-C-CC-CcceEEEEeccccCcccchhhHHhhCCCccccc-ccccc---ccc-CCCc-ccchhhhhhhh
Q 013956          332 TPLEVGLMLRAL-G-YG-SDVHIYVASGEVYGGEETLAPLKALFPNFYSKE-TIASK---ELE-PFSS-FSSRMAALDFI  402 (433)
Q Consensus       332 tPeEvgl~L~al-G-f~-~~T~IYlA~geiyGg~~~l~~L~~~FPnl~tKe-~L~s~---EL~-pF~~-~ss~~AALDyi  402 (433)
                             -++.+ . .+ .++.||||+-+.    ..++.+++.||++.+-. .+...   .+. +..+ ...+.+.+|.+
T Consensus       204 -------~i~~~~~~~~~~~~~vfvaSDd~----~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~Dm~  272 (330)
T 2hhc_A          204 -------AIRKAKALSYPKPVKVFLCTDSA----QVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGASALIDMY  272 (330)
T ss_dssp             -------HHHHHHTSCCSSCEEEEEEESCH----HHHHHHHHHSTTEECCCC-----------CHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHhccCcCceEEEEEeCCH----HHHHHHHHHcCCcccccceeecccccccccCchhhccchHHHHHHH
Confidence                   01110 0 12 467899999984    46778999999843321 11110   000 0000 12456889999


Q ss_pred             hhcCCceee-ecCCCchHHH
Q 013956          403 VCDESDIFV-TNNNGNMAKI  421 (433)
Q Consensus       403 Vc~~SDvFV-~t~~Gnma~~  421 (433)
                      ..+.||.+| .+..++|+-.
T Consensus       273 LLS~cd~~I~~~~~STFs~~  292 (330)
T 2hhc_A          273 LLARCATVIRFPPTSAFTRY  292 (330)
T ss_dssp             HHTTCSEEEEESTTCGGGHH
T ss_pred             HHHcCCeeEECCCCCCHHHH
Confidence            999999999 5446666544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00