Citrus Sinensis ID: 013981

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430--

MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQYTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQLDFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASDPSLQADYSLPRKVCRCFCCARRLGA

ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccccccccccccccEEcccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHcccccccHHHHHHHHHccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccccccccccccccc

cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHccccHHHHHHcccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcHHHHHHHHHHHHcccccccccccccHHHHHHEEEHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcEEEcccccHcEEEEEHHHHHHHHcHHHHHHccccccEEccccccHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHcccHHHccccccccccccccHccccccHHHHEEEEEEccc

MRELQGAIIVGSIFQSILGFTGLMSLFLRLinpvvvaptVAAIGLAFfsygfpqagscveisIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTaggaynykgcspdipssnilsdaCIKHAYTMKHCRTDVSNAWRTAAwvripyplqwgipifhLRTSLIMIIVSLVASVDSVGTYHTASllvnskpptprivsrgigMEGFCSILAGlwgsgtgsstltenvHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLsnlqytqsasfRNIMIVGASLFlglsipayfqqyhpetslilpsyfvpfaaasngpvhtgskQLDFAINALMSMNMVVTLLVAFILdntvpgsrqergVYIWSraedlasdpslqadyslprkvcrcfccarrlga

MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTasllvnskpptpRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQYTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQLDFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASdpslqadyslprkvCRCFCCARRLGA

MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSIlaglwgsgtgsstltENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQYTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQLDFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASDPSLQADYSLPRKVCRCFCCARRLGA

*****GAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAI*********ASILCFMWALIVAIGLSNLQYTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQLDFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASDPSLQADYSLPRKVCRCFCCAR****

ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

ooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

ooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		432	2.2.26 [Sep-21-2011]
Q6SZ87		709	Nucleobase-ascorbate tran	yes	no	0.986	0.600	0.769	0.0
Q3E7D0		709	Nucleobase-ascorbate tran	no	no	0.997	0.607	0.598	1e-141
Q0WPE9		538	Nucleobase-ascorbate tran	no	no	0.907	0.728	0.387	4e-80
Q9SHZ3		520	Nucleobase-ascorbate tran	no	no	0.907	0.753	0.407	2e-79
Q94C70		524	Nucleobase-ascorbate tran	no	no	0.907	0.748	0.375	1e-77
Q27GI3		532	Nucleobase-ascorbate tran	no	no	0.907	0.736	0.376	6e-76
Q8RWE9		528	Nucleobase-ascorbate tran	no	no	0.907	0.742	0.376	3e-75
Q8VZQ5		539	Nucleobase-ascorbate tran	no	no	0.902	0.723	0.360	4e-70
Q41760		527	Nucleobase-ascorbate tran	N/A	no	0.907	0.743	0.357	2e-68
P93039		526	Nucleobase-ascorbate tran	no	no	0.907	0.745	0.359	1e-64

>sp\|Q6SZ87\|NAT11_ARATH Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1	Back alignment and function desciption

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/426 (76%), Positives = 384/426 (90%)

Query: 1   MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVE 60
           MRELQGAIIVGS+FQ ILGF+GLMSL LR INPVVVAPTVAA+GLAFFSYGFPQAG+CVE
Sbjct: 281 MRELQGAIIVGSLFQCILGFSGLMSLLLRFINPVVVAPTVAAVGLAFFSYGFPQAGTCVE 340

Query: 61  ISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPD 120
           IS+P ILL+LIF LYLRG+S+FGH LFRIYAVPLS ++IW YAFFLT GGAY+Y+GC+ D
Sbjct: 341 ISVPLILLLLIFTLYLRGVSLFGHRLFRIYAVPLSALLIWTYAFFLTVGGAYDYRGCNAD 400

Query: 121 IPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVS 180
           IPSSNIL D C KH YTMKHCRTD SNAWRTA+WVRIPYP QWG P FH+RTS+IMI VS
Sbjct: 401 IPSSNILIDECKKHVYTMKHCRTDASNAWRTASWVRIPYPFQWGFPNFHMRTSIIMIFVS 460

Query: 181 LVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHT 240
           LVASVDSVGTYH+AS++VN+K PT  IVSRGI +EGFCS+LAG+WGSGTGS+TLTEN+HT
Sbjct: 461 LVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHT 520

Query: 241 ISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQ 300
           I+ITKVASRRA+ +GA+F+IV SF+GK+GAILASIPQALAAS+LCF+WAL V++GLSNL+
Sbjct: 521 INITKVASRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFIWALTVSLGLSNLR 580

Query: 301 YTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQL 360
           YTQ+ASFRNI IVG SLFLGLSIPAYFQQY P +SLILPSY++PF AAS+GP  TG +QL
Sbjct: 581 YTQTASFRNITIVGVSLFLGLSIPAYFQQYQPLSSLILPSYYIPFGAASSGPFQTGIEQL 640

Query: 361 DFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASDPSLQADYSLPRKV 420
           DFA+NA++S+NMVVT L+AFILDNTVPGS++ERGVY+W+RAED+  DP ++ADYSLPRK 
Sbjct: 641 DFAMNAVLSLNMVVTFLLAFILDNTVPGSKEERGVYVWTRAEDMQMDPEMRADYSLPRKF 700

Query: 421 CRCFCC 426
            + F C
Sbjct: 701 AQIFGC 706

Arabidopsis thaliana (taxid: 3702)

>sp\|Q3E7D0\|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3	Back alignment and function description

>sp\|Q0WPE9\|NAT7_ARATH Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2	Back alignment and function description

>sp\|Q9SHZ3\|NAT1_ARATH Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1	Back alignment and function description

>sp\|Q94C70\|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2	Back alignment and function description

>sp\|Q27GI3\|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2	Back alignment and function description

>sp\|Q8RWE9\|NAT5_ARATH Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1	Back alignment and function description

>sp\|Q8VZQ5\|NAT8_ARATH Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1	Back alignment and function description

>sp\|Q41760\|LPE1_MAIZE Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2	Back alignment and function description

>sp\|P93039\|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		432
255586649		756	purine permease, putative [Ricinus commu	0.990	0.566	0.866	0.0
224097178		530	nucleobase ascorbate transporter [Populu	0.981	0.8	0.849	0.0
356531353		728	PREDICTED: nucleobase-ascorbate transpor	0.997	0.592	0.807	0.0
449432962		771	PREDICTED: nucleobase-ascorbate transpor	0.990	0.555	0.785	0.0
356566181		767	PREDICTED: nucleobase-ascorbate transpor	0.997	0.561	0.793	0.0
357485507		716	Nucleobase-ascorbate transporter [Medica	0.997	0.601	0.760	0.0
297798068		707	permease [Arabidopsis lyrata subsp. lyra	0.988	0.603	0.775	0.0
79499196		709	nucleobase-ascorbate transporter 11 [Ara	0.986	0.600	0.769	0.0
26452174		429	unknown protein [Arabidopsis thaliana] g	0.986	0.993	0.769	0.0
4467111		703	putative protein [Arabidopsis thaliana]	0.949	0.583	0.720	1e-173

>gi\|255586649\|ref\|XP_002533955.1\| purine permease, putative [Ricinus communis] gi\|223526068\|gb\|EEF28424.1\| purine permease, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/428 (86%), Positives = 397/428 (92%)

Query: 1   MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVE 60
           MRELQGAIIVGSIFQSI+GFTGLMSL LRLINPVVVAPTVAA+GLAFFSYGFPQAGSCVE
Sbjct: 325 MRELQGAIIVGSIFQSIMGFTGLMSLLLRLINPVVVAPTVAAVGLAFFSYGFPQAGSCVE 384

Query: 61  ISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPD 120
           ISIP ILLVLIF LYLRGIS+FGH LFR+YAVPLSV+IIW YAFFLTAGGAYN+KGCSPD
Sbjct: 385 ISIPLILLVLIFTLYLRGISIFGHRLFRVYAVPLSVVIIWTYAFFLTAGGAYNFKGCSPD 444

Query: 121 IPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVS 180
           IPSSNIL D+C KHAYTM+ CRTDVSNAWRT+AWVRIPYPLQWGIPIFHLRTSLIMIIVS
Sbjct: 445 IPSSNILVDSCRKHAYTMQRCRTDVSNAWRTSAWVRIPYPLQWGIPIFHLRTSLIMIIVS 504

Query: 181 LVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTENVHT 240
           LVASVDSVGTYH+ SLLVNSKPPTP IVSRGI MEGFCS+LAGLWGSGTGS+TLTENVHT
Sbjct: 505 LVASVDSVGTYHSTSLLVNSKPPTPGIVSRGIAMEGFCSVLAGLWGSGTGSTTLTENVHT 564

Query: 241 ISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQ 300
           I+ITKVASRRAV +GA F+I+FSFVGKVGAILASIP ALAA ILCFMW LI A+GLS LQ
Sbjct: 565 INITKVASRRAVVIGAFFLILFSFVGKVGAILASIPLALAAGILCFMWGLIAALGLSTLQ 624

Query: 301 YTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQL 360
           Y+Q+ASFRNI IVG SLFLG+SIPAYFQQY PETSLILPSYFVP++AASNGPVHT SKQ 
Sbjct: 625 YSQTASFRNIAIVGVSLFLGMSIPAYFQQYQPETSLILPSYFVPYSAASNGPVHTSSKQF 684

Query: 361 DFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASDPSLQADYSLPRKV 420
           DFAINALMS+NMVVTLLVAF+LDNTVPG+RQERGVYIWS  EDL +DPSL ADYSLP KV
Sbjct: 685 DFAINALMSLNMVVTLLVAFVLDNTVPGTRQERGVYIWSHPEDLVTDPSLHADYSLPGKV 744

Query: 421 CRCFCCAR 428
            R FCC R
Sbjct: 745 SRFFCCLR 752

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224097178\|ref\|XP_002310865.1\| nucleobase ascorbate transporter [Populus trichocarpa] gi\|222853768\|gb\|EEE91315.1\| nucleobase ascorbate transporter [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356531353\|ref\|XP_003534242.1\| PREDICTED: nucleobase-ascorbate transporter 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|449432962\|ref\|XP_004134267.1\| PREDICTED: nucleobase-ascorbate transporter 11-like [Cucumis sativus] gi\|449518994\|ref\|XP_004166520.1\| PREDICTED: nucleobase-ascorbate transporter 11-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356566181\|ref\|XP_003551313.1\| PREDICTED: nucleobase-ascorbate transporter 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|357485507\|ref\|XP_003613041.1\| Nucleobase-ascorbate transporter [Medicago truncatula] gi\|355514376\|gb\|AES95999.1\| Nucleobase-ascorbate transporter [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297798068\|ref\|XP_002866918.1\| permease [Arabidopsis lyrata subsp. lyrata] gi\|297312754\|gb\|EFH43177.1\| permease [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|79499196\|ref\|NP_195518.2\| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana] gi\|75128428\|sp\|Q6SZ87.1\|NAT11_ARATH RecName: Full=Nucleobase-ascorbate transporter 11; Short=AtNAT11 gi\|38350521\|gb\|AAR18373.1\| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana] gi\|332661467\|gb\|AEE86867.1\| nucleobase-ascorbate transporter 11 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|26452174\|dbj\|BAC43175.1\| unknown protein [Arabidopsis thaliana] gi\|28951001\|gb\|AAO63424.1\| At4g38050 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|4467111\|emb\|CAB37545.1\| putative protein [Arabidopsis thaliana] gi\|7270788\|emb\|CAB80470.1\| putative protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		432
TAIR\|locus:2120953		709	AT4G38050 [Arabidopsis thalian	0.986	0.600	0.739	1.4e-174
TAIR\|locus:2042036		709	NAT12 "nucleobase-ascorbate tr	0.997	0.607	0.568	4.1e-136
TAIR\|locus:2040874		524	AT2G34190 [Arabidopsis thalian	0.659	0.543	0.356	6.7e-73
TAIR\|locus:2060076		520	AT2G05760 [Arabidopsis thalian	0.643	0.534	0.387	9.7e-72
TAIR\|locus:2158829		528	AT5G49990 [Arabidopsis thalian	0.634	0.518	0.363	1.2e-71
TAIR\|locus:2202700		538	NAT7 "nucleobase-ascorbate tra	0.634	0.509	0.376	2e-71
TAIR\|locus:2170783		532	AT5G62890 [Arabidopsis thalian	0.634	0.515	0.366	1.4e-68
TAIR\|locus:2031085		526	AT1G49960 [Arabidopsis thalian	0.634	0.520	0.349	2.6e-63
TAIR\|locus:2066190		551	PDE135 "pigment defective embr	0.625	0.490	0.348	5.4e-61
ZFIN\|ZDB-GENE-050306-38		619	zgc:110789 "zgc:110789" [Danio	0.736	0.513	0.355	1.6e-59

TAIR\|locus:2120953 AT4G38050 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1696 (602.1 bits), Expect = 1.4e-174, P = 1.4e-174
 Identities = 315/426 (73%), Positives = 369/426 (86%)

Query:     1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVE 60
             MRELQGAIIVGS+FQ ILGF+GLMSL LR INPVVVAPTVAA+GLAFFSYGFPQAG+CVE
Sbjct:   281 MRELQGAIIVGSLFQCILGFSGLMSLLLRFINPVVVAPTVAAVGLAFFSYGFPQAGTCVE 340

Query:    61 ISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPD 120
             IS+P ILL+LIF LYLRG+S+FGH LFRIYAVPLS ++IW YAFFLT GGAY+Y+GC+ D
Sbjct:   341 ISVPLILLLLIFTLYLRGVSLFGHRLFRIYAVPLSALLIWTYAFFLTVGGAYDYRGCNAD 400

Query:   121 IPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTSLIMIIVS 180
             IPSSNIL D C KH YTMKHCRTD SNAWRTA+WVRIPYP QWG P FH+RTS+IMI VS
Sbjct:   401 IPSSNILIDECKKHVYTMKHCRTDASNAWRTASWVRIPYPFQWGFPNFHMRTSIIMIFVS 460

Query:   181 LVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSIXXXXXXXXXXXXXXXENVHT 240
             LVASVDSVGTYH+AS++VN+K PT  IVSRGI +EGFCS+               EN+HT
Sbjct:   461 LVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHT 520

Query:   241 ISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQ 300
             I+ITKVASRRA+ +GA+F+IV SF+GK+GAILASIPQALAAS+LCF+WAL V++GLSNL+
Sbjct:   521 INITKVASRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFIWALTVSLGLSNLR 580

Query:   301 YTQSASFRNIMIVGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQL 360
             YTQ+ASFRNI IVG SLFLGLSIPAYFQQY P +SLILPSY++PF AAS+GP  TG +QL
Sbjct:   581 YTQTASFRNITIVGVSLFLGLSIPAYFQQYQPLSSLILPSYYIPFGAASSGPFQTGIEQL 640

Query:   361 DFAINALMSMNMVVTLLVAFILDNTVPGSRQERGVYIWSRAEDLASDPSLQADYSLPRKV 420
             DFA+NA++S+NMVVT L+AFILDNTVPGS++ERGVY+W+RAED+  DP ++ADYSLPRK 
Sbjct:   641 DFAMNAVLSLNMVVTFLLAFILDNTVPGSKEERGVYVWTRAEDMQMDPEMRADYSLPRKF 700

Query:   421 CRCFCC 426
              + F C
Sbjct:   701 AQIFGC 706

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TAIR\|locus:2042036 NAT12 "nucleobase-ascorbate transporter 12" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2066190 PDE135 "pigment defective embryo 135" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-050306-38 zgc:110789 "zgc:110789" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6SZ87	NAT11_ARATH	No assigned EC number	0.7699	0.9861	0.6008	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00011817001	SubName- Full=Chromosome undetermined scaffold_340, whole genome shotgun sequence; (763 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		432
pfam00860		389	pfam00860, Xan_ur_permease, Permease family	2e-39
TIGR03173		406	TIGR03173, pbuX, xanthine permease	3e-29
COG2233		451	COG2233, UraA, Xanthine/uracil permeases [Nucleoti	1e-28
TIGR00801		412	TIGR00801, ncs2, uracil-xanthine permease	9e-19
TIGR03616		429	TIGR03616, RutG, pyrimidine utilization transport	1e-08
PRK10720		428	PRK10720, PRK10720, uracil transporter; Provisiona	1e-06

>gnl\|CDD\|216158 pfam00860, Xan_ur_permease, Permease family	Back alignment and domain information

 Score =  145 bits (368), Expect = 2e-39
 Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 42/334 (12%)

Query: 1   MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVE 60
           +  L GA++V  +  +++ FTGL     RL  PVV  P V  IGL+        AG    
Sbjct: 89  LAGLFGAVLVAGVLFTLISFTGLRGRLARLFPPVVTGPVVLLIGLSLAPIAVKGAGGGWA 148

Query: 61  ISIPQILLVLIFALY-------LRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYN 113
           I+    + +L            +  +SVF    FR   + + ++  W  A F+       
Sbjct: 149 IADGLTVGLLDLLGLAVVVLAVILLLSVFLKGFFRQGPILIGIIAGWLLALFMG------ 202

Query: 114 YKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHLRTS 173
                                         + S     A W ++P+P  +G P+F+    
Sbjct: 203 ----------------------------IVNFSPEVMDAPWFQLPHPFPFGTPLFNPGLI 234

Query: 174 LIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSST 233
           L ++ V+LVA V+S G     + +          + RG+  +G  ++L+GL+G+   ++T
Sbjct: 235 LTVLAVALVAIVESTGDIRAVAKVSGRDLKPKPDLRRGLLADGLATLLSGLFGA-FPTTT 293

Query: 234 LTENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVA 293
             EN+  +++TKV SRR      V +I+   + K  A+ +SIP  +   ++  M+ +I  
Sbjct: 294 YAENIGVVALTKVYSRRVGVTAGVILILLGLIPKFAALFSSIPSPVLGGVMLVMFGMIAG 353

Query: 294 IGLSNLQYTQSASFRNIMIVGASLFLGLSIPAYF 327
            G+SNL      S RN++I+  SL LGL I    
Sbjct: 354 SGVSNLITVDLDSARNLLIIAVSLVLGLGISTVP 387

This family includes permeases for diverse substrates such as xanthine, uracil, and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices. Length = 389

>gnl\|CDD\|234136 TIGR03173, pbuX, xanthine permease	Back alignment and domain information

>gnl\|CDD\|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|233133 TIGR00801, ncs2, uracil-xanthine permease	Back alignment and domain information

>gnl\|CDD\|132655 TIGR03616, RutG, pyrimidine utilization transport protein G	Back alignment and domain information

>gnl\|CDD\|236744 PRK10720, PRK10720, uracil transporter; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		432
KOG1292		510	consensus Xanthine/uracil transporters [Nucleotide	100.0
COG2233		451	UraA Xanthine/uracil permeases [Nucleotide transpo	100.0
PRK11412		433	putative uracil/xanthine transporter; Provisional	100.0
PRK10720		428	uracil transporter; Provisional	100.0
TIGR03616		429	RutG pyrimidine utilization transport protein G. T	100.0
TIGR03173		406	pbuX xanthine permease. All the seed members of th	100.0
TIGR00801		415	ncs2 uracil-xanthine permease. NCS2 family appears	100.0
PF00860		389	Xan_ur_permease: Permease family; InterPro: IPR006	100.0
COG2252		436	Xanthine/uracil/vitamin C permease [Nucleotide tra	99.82
COG0659		554	SUL1 Sulfate permease and related transporters (MF	99.74
TIGR00815		563	sulP high affinity sulphate transporter 1. (2) SO4	99.69
PRK11660		568	putative transporter; Provisional	99.62
TIGR00843		395	benE benzoate transporter. The benzoate transporte	99.62
PF03594		378	BenE: Benzoate membrane transport protein; InterPr	99.54
PF00916		280	Sulfate_transp: Sulfate transporter family; InterP	99.48
COG3135		402	BenE Uncharacterized protein involved in benzoate	99.42
KOG0236		665	consensus Sulfate/bicarbonate/oxalate exchanger SA	99.19
TIGR00834		900	ae anion exchange protein. They preferentially cat	96.67
PF11840		492	DUF3360: Protein of unknown function (DUF3360); In	96.36
KOG1172		876	consensus Na+-independent Cl/HCO3 exchanger AE1 an	95.86
COG0659		554	SUL1 Sulfate permease and related transporters (MF	88.41
TIGR00815		563	sulP high affinity sulphate transporter 1. (2) SO4	82.98

>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=2.6e-80  Score=628.01  Aligned_cols=392  Identities=46%  Similarity=0.830  Sum_probs=370.8

Q ss_pred             ChhHHHHHHHHHHHHHHHHhhhhHHHHHHhcCchhHHHHHHHHHhhhhhhhcCCCCccccchHHHHHHHHHHHHH--HHH
Q 013981            1 MRELQGAIIVGSIFQSILGFTGLMSLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSCVEISIPQILLVLIFALY--LRG   78 (432)
Q Consensus         1 ~~~~~Ga~ivaGl~~illg~~gl~~~l~~~fpP~V~G~vv~lIGlsl~~~g~~~~g~~~~i~~~~~~l~~~~~l~--l~~   78 (432)
                      ||++|||+++++++++++|++|+++++.|++.|+.+.+++.++|+++...+.+..+.||+++++.+.+.+++++|  +..
T Consensus       114 mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~  193 (510)
T KOG1292|consen  114 MREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKLGKHWEISLPEILLLILFSQYASLPK  193 (510)
T ss_pred             HHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhhhhheeecHHHHHHHHHHHHhhhccc
Confidence            789999999999999999999999999999999999999999999999999999999999999999988898888  321


Q ss_pred             HHh--hhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhccccccccccccchhhhcccccc
Q 013981           79 ISV--FGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVR  156 (432)
Q Consensus        79 ~~~--~~~~~~r~~aiLigi~vG~~~a~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~v~~apw~~  156 (432)
                      ...  ..+++++++++++++.+.|++|.+++.+|.++.+                  +.+||++||+|-+...+++||+.
T Consensus       194 ~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~------------------~~~t~~~~RTD~~~vi~~apWi~  255 (510)
T KOG1292|consen  194 KGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYK------------------PTTTQSSCRTDRNGVISSAPWIR  255 (510)
T ss_pred             ccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCC------------------ccccCCcccccHhhhhccCCcee
Confidence            111  2256899999999999999999999988777643                  24678999999987778999999


Q ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCccccccchhhhchHHHHhhhhCCCCCCCcccc
Q 013981          157 IPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTLTE  236 (432)
Q Consensus       157 ~P~p~~~g~P~f~~~~il~~~~i~lv~~~esiG~~~a~~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfGt~~~~t~~s~  236 (432)
                      +|+|+|||.|+||++....|+...+++++|++|+|.|++|.+++++++++.+|||+..||++++++|+||+|.++|+|+|
T Consensus       256 vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~E  335 (510)
T KOG1292|consen  256 VPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVE  335 (510)
T ss_pred             ecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHHHHhhCCCccceeecc
Confidence            99999999999999999999999999999999999999999999889999999999999999999999999999999999


Q ss_pred             cchhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHhHhhhhccCCCccceeEEeeh
Q 013981          237 NVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNLQYTQSASFRNIMIVGAS  316 (432)
Q Consensus       237 n~G~i~~Tgv~Sr~v~~~a~~~lillgl~pk~~alla~IP~~V~gg~llvlfg~i~~~Gi~~l~~~~~~~~Rn~~Ivg~s  316 (432)
                      |+|++++||+.||++++++|+|||++|++.||+|++++||+|++||+++++|+++...|++++|++|+++.||++|+|+|
T Consensus       336 Nigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf~dlns~RNl~IlG~S  415 (510)
T KOG1292|consen  336 NIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQFVDLNSSRNLFILGFS  415 (510)
T ss_pred             ceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhheeeccccccchhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcchhHHhhhcCcccccccCCccccccccCCCCccCCccchHHHHHHHhcchhHHHHHHHHHHHhcCCC-Ccccccc
Q 013981          317 LFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQLDFAINALMSMNMVVTLLVAFILDNTVPG-SRQERGV  395 (432)
Q Consensus       317 l~~Glg~p~~~~~~~p~~~~~lP~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~g~~vg~l~aiiLn~~~p~-~~~~rg~  395 (432)
                      +++|+.+|+||++++                   +|++||.+++||+++.++++.++||+++|++|||++|+ +|||||+
T Consensus       416 if~gLsip~yF~~~~-------------------~~v~Tg~~~~d~ilnvll~~~m~Vggi~A~~LDnt~~gatr~~RG~  476 (510)
T KOG1292|consen  416 IFLGLSIPQYFEQYP-------------------GPVHTGNGWFDDILNVLLSSRMLVGGILAFILDNTLPGATREQRGL  476 (510)
T ss_pred             HHHhccHHHHHHhCC-------------------CccccCcHHHHHHHHHHhhHHHHHHHHHhhhccccCCCCChHhcCC
Confidence            999999999999963                   47899999999999999999999999999999999999 5899999


Q ss_pred             hhhhccccCCCCCCCCccccCCccCccccccccc
Q 013981          396 YIWSRAEDLASDPSLQADYSLPRKVCRCFCCARR  429 (432)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~  429 (432)
                      ++|++.++.+.|.+++++|+||+++||+|++++|
T Consensus       477 ~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~~~~  510 (510)
T KOG1292|consen  477 RWWDKFETFNGDVRNEEFYSLPFNLNRFFPRIPW  510 (510)
T ss_pred             cchhccccccCCccccccccCcHHHHhhcccCCC
Confidence            9999999999999999999999999999999886

>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK11412 putative uracil/xanthine transporter; Provisional	Back alignment and domain information

>PRK10720 uracil transporter; Provisional	Back alignment and domain information

>TIGR03616 RutG pyrimidine utilization transport protein G	Back alignment and domain information

>TIGR03173 pbuX xanthine permease	Back alignment and domain information

>TIGR00801 ncs2 uracil-xanthine permease	Back alignment and domain information

>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []	Back alignment and domain information

>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]	Back alignment and domain information

>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00815 sulP high affinity sulphate transporter 1	Back alignment and domain information

>PRK11660 putative transporter; Provisional	Back alignment and domain information

>TIGR00843 benE benzoate transporter	Back alignment and domain information

>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]	Back alignment and domain information

>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related	Back alignment and domain information

>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00834 ae anion exchange protein	Back alignment and domain information

>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised	Back alignment and domain information

>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00815 sulP high affinity sulphate transporter 1	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		432
3qe7_A		429	Uracil permease; uracil transporter, URAA, transpo	2e-26

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429	Back alignment and structure

 Score =  109 bits (274), Expect = 2e-26
 Identities = 64/334 (19%), Positives = 124/334 (37%), Gaps = 62/334 (18%)

Query: 5   QGAIIVGSIFQSILGF---TGLMSLFLRLINPVVVAPTVAAIGL---------AFFSYGF 52
            G  I+  +   ++ F            L  P  +   VA IGL         A      
Sbjct: 91  LGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAE 150

Query: 53  PQAGS--CVEISIPQILLVLIFALYLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGG 110
            Q      + ISI  + + ++ ++  RG          I  + + V++ +A +F +   G
Sbjct: 151 GQTPDSKTIIISITTLAVTVLGSVLFRGF-------LAIIPILIGVLVGYALSFAM---G 200

Query: 111 AYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAWVRIPYPLQWGIPIFHL 170
             +                               + NA     W  +P       P F  
Sbjct: 201 IVDTTP----------------------------IINA----HWFALP---TLYTPRFEW 225

Query: 171 RTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTG 230
              L ++  +LV   + VG     + +V         + R +   G  ++++G +G  T 
Sbjct: 226 FAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFG-STP 284

Query: 231 SSTLTENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWAL 290
           ++T  EN+  ++IT+V S   +   A+F I+ S VGK+ A +  IP  +   +   ++ +
Sbjct: 285 NTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGV 344

Query: 291 IVAIGLSNLQYTQ--SASFRNIMIVGASLFLGLS 322
           I A G+  L  ++      +N+++    L +G+S
Sbjct: 345 IGASGIRVLIESKVDYNKAQNLILTSVILIIGVS 378

PyMOL of 3qe7

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		432
3qe7_A		429	Uracil permease; uracil transporter, URAA, transpo	100.0

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}	Back alignment and structure

Probab=100.00  E-value=2.6e-53  Score=439.69  Aligned_cols=326  Identities=21%  Similarity=0.276  Sum_probs=265.9

Q ss_pred             hhHHHHHHHHHHHHHHHHhh--hhH-HHHHHhcCchhHHHHHHHHHhhhhhhhcCCCCcc----ccchHHHHHHHHHHHH
Q 013981            2 RELQGAIIVGSIFQSILGFT--GLM-SLFLRLINPVVVAPTVAAIGLAFFSYGFPQAGSC----VEISIPQILLVLIFAL   74 (432)
Q Consensus         2 ~~~~Ga~ivaGl~~illg~~--gl~-~~l~~~fpP~V~G~vv~lIGlsl~~~g~~~~g~~----~~i~~~~~~l~~~~~l   74 (432)
                      |+++|+++++|+++++++++  ++. +|++|+|||+|+|+++++||+++.+.++++.+..    ...+.+...+.++..+
T Consensus        88 ~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~  167 (429)
T 3qe7_A           88 EVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLA  167 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCCCCccccHHHHHHHHHHHH
Confidence            67899999999999999986  433 7999999999999999999999998876543210    0111222222222222


Q ss_pred             HHHHHHhhhcchhhhhhHHHHHHHHHHHHHHHHhcCCccCCCCCCCCCCCccchhhhhhccccccccccccchhhhcccc
Q 013981           75 YLRGISVFGHHLFRIYAVPLSVMIIWAYAFFLTAGGAYNYKGCSPDIPSSNILSDACIKHAYTMKHCRTDVSNAWRTAAW  154 (432)
Q Consensus        75 ~l~~~~~~~~~~~r~~aiLigi~vG~~~a~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~v~~apw  154 (432)
                      .+..++++.|+++|++++|+|+++||++++.++.                                  +|++ .+.++||
T Consensus       168 iii~~~~~~kg~~~~~aiLigivvg~~~a~~~G~----------------------------------~d~~-~v~~a~~  212 (429)
T 3qe7_A          168 VTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGI----------------------------------VDTT-PIINAHW  212 (429)
T ss_dssp             HHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHHH----------------------------------TTSS-HHHHSCS
T ss_pred             HHHHHHHHhcccchhhHHHHHHHHHHHHHHHhcC----------------------------------CCcc-ccccccc
Confidence            2233577889999999999999999999999843                                  2343 4677899


Q ss_pred             cccccccccccccccHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcCCCCCccccccchhhhchHHHHhhhhCCCCCCCcc
Q 013981          155 VRIPYPLQWGIPIFHLRTSLIMIIVSLVASVDSVGTYHTASLLVNSKPPTPRIVSRGIGMEGFCSILAGLWGSGTGSSTL  234 (432)
Q Consensus       155 ~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esiG~~~a~~~~~~~~~~~~~~~~r~l~~dGl~~ilaglfGt~~~~t~~  234 (432)
                      +++|.   |+.|+||+..+..++++++++++|++|++.++++.++++..++++.||++.+||++|+++|+||+ +|+|+|
T Consensus       213 ~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg-~p~Tt~  288 (429)
T 3qe7_A          213 FALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS-TPNTTY  288 (429)
T ss_dssp             SCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTC-CCEEEC
T ss_pred             ccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCC-CCcchH
Confidence            99994   57799999999999999999999999999999999875443456789999999999999999996 999999


Q ss_pred             cccchhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHhHhh--hhccCCCccceeE
Q 013981          235 TENVHTISITKVASRRAVQLGAVFMIVFSFVGKVGAILASIPQALAASILCFMWALIVAIGLSNL--QYTQSASFRNIMI  312 (432)
Q Consensus       235 s~n~G~i~~Tgv~Sr~v~~~a~~~lillgl~pk~~alla~IP~~V~gg~llvlfg~i~~~Gi~~l--~~~~~~~~Rn~~I  312 (432)
                      +||+|+++.||++||++.+.+|+++++++++||+++++++||.||+||+.+++||++..+|+|++  ++.|++++||.+|
T Consensus       289 ~en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~lfg~i~~~Gi~~l~~~~v~~~~~rn~~i  368 (429)
T 3qe7_A          289 GENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLIL  368 (429)
T ss_dssp             HHHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTSHHHHHH
T ss_pred             HHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999  7788888899999


Q ss_pred             EeehhhhhcchhHHhhhcCcccccccCCccccccccCCCCccCCccchHHHHHHHhcchhHHHHHHHHHHHhcCCCCccc
Q 013981          313 VGASLFLGLSIPAYFQQYHPETSLILPSYFVPFAAASNGPVHTGSKQLDFAINALMSMNMVVTLLVAFILDNTVPGSRQE  392 (432)
Q Consensus       313 vg~sl~~Glg~p~~~~~~~p~~~~~lP~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~g~~vg~l~aiiLn~~~p~~~~~  392 (432)
                      +++++.+|++..     +.|         +                      +.+..||+.+|+++|++||+++|+++++
T Consensus       369 ~~~~l~~G~g~~-----~~~---------~----------------------~~~~~~gi~~~~~~ai~ln~~l~~~~~~  412 (429)
T 3qe7_A          369 TSVILIIGVSGA-----KVN---------I----------------------GAAELKGMALATIVGIGLSLIFKLISVL  412 (429)
T ss_dssp             HHHHHHHHHHCC-----CCC---------S----------------------SSCCCCHHHHHHHHHHHHHHHHTCCC--
T ss_pred             HHHHHHHHHHHH-----HHh---------h----------------------hhhccCcHHHHHHHHHHHHHHhcCcccc
Confidence            999999999854     111         0                      1166789999999999999999998888


Q ss_pred             ccchhhhccc
Q 013981          393 RGVYIWSRAE  402 (432)
Q Consensus       393 rg~~~~~~~~  402 (432)
                      |+.++.-..|
T Consensus       413 ~~~~~~~~~~  422 (429)
T 3qe7_A          413 RPEEVVLDAE  422 (429)
T ss_dssp             ----------
T ss_pred             CCcceEecch
Confidence            7765554433

PyMOL of 3qe7

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00