Citrus Sinensis ID: 013984
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| 224082810 | 428 | predicted protein [Populus trichocarpa] | 0.990 | 1.0 | 0.833 | 0.0 | |
| 297744143 | 424 | unnamed protein product [Vitis vinifera] | 0.981 | 1.0 | 0.833 | 0.0 | |
| 225438149 | 420 | PREDICTED: UPF0420 protein C16orf58 homo | 0.969 | 0.997 | 0.838 | 0.0 | |
| 255567274 | 436 | conserved hypothetical protein [Ricinus | 0.997 | 0.988 | 0.814 | 0.0 | |
| 334184613 | 432 | uncharacterized protein [Arabidopsis tha | 1.0 | 1.0 | 0.777 | 0.0 | |
| 18402585 | 433 | uncharacterized protein [Arabidopsis tha | 0.995 | 0.993 | 0.779 | 0.0 | |
| 449462449 | 428 | PREDICTED: UPF0420 protein C16orf58 homo | 0.990 | 1.0 | 0.766 | 0.0 | |
| 449502048 | 428 | PREDICTED: UPF0420 protein C16orf58 homo | 0.990 | 1.0 | 0.763 | 0.0 | |
| 297826561 | 419 | hypothetical protein ARALYDRAFT_482047 [ | 0.969 | 1.0 | 0.752 | 0.0 | |
| 356545865 | 431 | PREDICTED: UPF0420 protein C16orf58 homo | 0.986 | 0.988 | 0.755 | 0.0 |
| >gi|224082810|ref|XP_002306848.1| predicted protein [Populus trichocarpa] gi|222856297|gb|EEE93844.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/432 (83%), Positives = 393/432 (90%), Gaps = 4/432 (0%)
Query: 1 MNLLEKIKKQKKKEPDKSMSVQEIPIYWFETSDSVTRHYQFQPDGHLSVKVVDDSRPVYH 60
MNLL+KIK QKK EPDK+ EIP+YW ETSDSV+RH+QF+PDG LS+KVVDD+RPVY
Sbjct: 1 MNLLDKIKMQKK-EPDKT---PEIPVYWIETSDSVSRHFQFEPDGQLSMKVVDDARPVYR 56
Query: 61 RVVDSFLNKFFPSGYPFSVNEGYLRYTQFRALQHFTSAALSVLSTQSLLFAAGLRPTPAQ 120
RVV+SFLNKFFPSGYP+SVNEGYLRYTQFRALQHF+SAALSVLSTQSLLFAAGLRPTPAQ
Sbjct: 57 RVVESFLNKFFPSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQ 116
Query: 121 ATVVSWILKDGMQHVGKLICSNLGARMDSEPKRWRILADALYDLGTGLEVLSPLCPQLFL 180
AT VSWILKDGMQH GKLICSNLGARMDSEPKRWRILAD LYDLGTGLEVLSPLCP LFL
Sbjct: 117 ATAVSWILKDGMQHAGKLICSNLGARMDSEPKRWRILADVLYDLGTGLEVLSPLCPHLFL 176
Query: 181 EMAGLGNFAKGIAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGLGAGIQLA 240
E+AGLGNFAKG+AVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNV+GLG GIQLA
Sbjct: 177 EVAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVLGLGVGIQLA 236
Query: 241 STVCSSMQGKMIVGPLLSVIHVYSVIEEMRAAPVNTLNPQRTAMIVADFVKTGRISSPAD 300
STVCSSMQGK + GPLLS++HV VIEEMRA PVNTLNPQRTAM+VADFVKTG+ISSPAD
Sbjct: 237 STVCSSMQGKFVAGPLLSIVHVCCVIEEMRATPVNTLNPQRTAMVVADFVKTGKISSPAD 296
Query: 301 LRYREDLLFPGRLIEDAGNVKVGRDPHKVVKPSKFHELKELFAEEKFILCLGSRWTDMVL 360
LRY EDLLFPGRLIE+AGNVKVG+ H+ V+PSK ELKE+F EKFIL G++WTD+VL
Sbjct: 297 LRYHEDLLFPGRLIENAGNVKVGQALHRAVRPSKLRELKEIFPGEKFILSPGNKWTDLVL 356
Query: 361 EQNASGEDALRGWLVAAYAASMAKSFHDPSLTVLQDAYDKMNDVFTPLLSELQAKGWHTD 420
EQNASGEDALR WLVAAYA+SM KS H+ + LQDAY+KMN VF P LSELQAKGWHTD
Sbjct: 357 EQNASGEDALRAWLVAAYASSMKKSSHESTSVTLQDAYEKMNSVFDPFLSELQAKGWHTD 416
Query: 421 RFLDGTGTRFAW 432
RFLDGTG+RF+W
Sbjct: 417 RFLDGTGSRFSW 428
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744143|emb|CBI37113.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225438149|ref|XP_002273202.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255567274|ref|XP_002524618.1| conserved hypothetical protein [Ricinus communis] gi|223536171|gb|EEF37826.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|334184613|ref|NP_001189649.1| uncharacterized protein [Arabidopsis thaliana] gi|330253412|gb|AEC08506.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|18402585|ref|NP_565718.1| uncharacterized protein [Arabidopsis thaliana] gi|20197897|gb|AAD20664.2| expressed protein [Arabidopsis thaliana] gi|21553562|gb|AAM62655.1| unknown [Arabidopsis thaliana] gi|109134157|gb|ABG25076.1| At2g31190 [Arabidopsis thaliana] gi|330253411|gb|AEC08505.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449462449|ref|XP_004148953.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449502048|ref|XP_004161529.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297826561|ref|XP_002881163.1| hypothetical protein ARALYDRAFT_482047 [Arabidopsis lyrata subsp. lyrata] gi|297327002|gb|EFH57422.1| hypothetical protein ARALYDRAFT_482047 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356545865|ref|XP_003541354.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 432 | ||||||
| TAIR|locus:2042536 | 433 | RUS2 "AT2G31190" [Arabidopsis | 0.956 | 0.953 | 0.794 | 2.6e-182 | |
| TAIR|locus:2155436 | 497 | RUS6 "AT5G49820" [Arabidopsis | 0.793 | 0.690 | 0.323 | 4e-42 | |
| TAIR|locus:2077197 | 608 | RUS1 "AT3G45890" [Arabidopsis | 0.666 | 0.473 | 0.303 | 1.1e-33 | |
| ZFIN|ZDB-GENE-070410-89 | 435 | zgc:162613 "zgc:162613" [Danio | 0.833 | 0.827 | 0.279 | 1.2e-33 | |
| MGI|MGI:2384572 | 466 | BC017158 "cDNA sequence BC0171 | 0.793 | 0.736 | 0.292 | 8.5e-33 | |
| TAIR|locus:2023885 | 440 | RUS3 "AT1G13770" [Arabidopsis | 0.847 | 0.831 | 0.256 | 5.4e-31 | |
| TAIR|locus:2149745 | 509 | RUS5 "AT5G01510" [Arabidopsis | 0.805 | 0.683 | 0.281 | 7.5e-31 | |
| RGD|1310127 | 466 | RGD1310127 "similar to cDNA se | 0.798 | 0.740 | 0.272 | 8.8e-31 | |
| UNIPROTKB|Q96GQ5 | 468 | C16orf58 "UPF0420 protein C16o | 0.879 | 0.811 | 0.255 | 3e-30 | |
| DICTYBASE|DDB_G0277179 | 527 | DDB_G0277179 "DUF647 family pr | 0.629 | 0.516 | 0.293 | 4.9e-28 |
| TAIR|locus:2042536 RUS2 "AT2G31190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1769 (627.8 bits), Expect = 2.6e-182, P = 2.6e-182
Identities = 328/413 (79%), Positives = 374/413 (90%)
Query: 20 SVQEIPIYWFETSDSVTRHYQFQPDGHLSVKVVDDSRPVYHRVVDSFLNKFFPSGYPFSV 79
S ++ P+YWFETSDSV+ YQFQ DGHLS+KVVDD+RPV ++V+SFLNKFFPSGYP+SV
Sbjct: 21 SPEDFPVYWFETSDSVSHRYQFQSDGHLSMKVVDDARPVPQKMVESFLNKFFPSGYPYSV 80
Query: 80 NEGYLRYTQFRALQHFTSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKLI 139
NEGYLRYTQFRALQHF+SAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKLI
Sbjct: 81 NEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKLI 140
Query: 140 CSNLGARMDSEPKRWRILADALYDLGTGLEVLSPLCPQLFLEMAGLGNFAKGIAVVAARA 199
CSNLGARMDSEPKRWRILAD LYDLGTGLE++SPLCP LFLEMAGLGNFAKG+A VAARA
Sbjct: 141 CSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAGLGNFAKGMATVAARA 200
Query: 200 TRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGLGAGIQLASTVCSSMQGKMIVGPLLSV 259
TRLPIYSSFAKEGNLSD+FAKGEAISTLFNV G+GAGIQLAST+CSSM+GK++VG +LSV
Sbjct: 201 TRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLASTICSSMEGKLVVGSILSV 260
Query: 260 IHVYSVIEEMRAAPVNTLNPQRTAMIVADFVKTGRISSPADLRYREDLLFPGRLIEDAGN 319
+HVYSV+E+MR P+NTLNPQRTA+IVA+F+KTG++ SP DLR++EDL+FP R I+DAGN
Sbjct: 261 VHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLRFQEDLMFPERPIQDAGN 320
Query: 320 VKVGRDPHKVVKPSKFHELKELFAEEKFILCLGSRWTDMVLEQNASGEDALRGWLVAAYA 379
VKVGR HK VKPS+ LK++F EEKF+L G WTDMVLE +A+GEDALRGWLVAAY
Sbjct: 321 VKVGRALHKAVKPSEVQRLKQVFVEEKFLLSHGKSWTDMVLEHDATGEDALRGWLVAAYV 380
Query: 380 ASMAKSFHDPSLTVLQDAYDKMNDVFTPLLSELQAKGWHTDRFLDGTGTRFAW 432
SM K ++DP +LQDAYDKMNDVF P LS++QAKGW+TDRFLDGTGTRFAW
Sbjct: 381 KSMTKIYNDPDDIILQDAYDKMNDVFNPFLSQVQAKGWYTDRFLDGTGTRFAW 433
|
|
| TAIR|locus:2155436 RUS6 "AT5G49820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2077197 RUS1 "AT3G45890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-070410-89 zgc:162613 "zgc:162613" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2384572 BC017158 "cDNA sequence BC017158" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2023885 RUS3 "AT1G13770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2149745 RUS5 "AT5G01510" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| RGD|1310127 RGD1310127 "similar to cDNA sequence BC017158" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96GQ5 C16orf58 "UPF0420 protein C16orf58" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0277179 DDB_G0277179 "DUF647 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_Genewise1_v1.C_LG_V1225 | hypothetical protein (428 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| pfam04884 | 251 | pfam04884, DUF647, Protein of unknown function (DU | 1e-101 |
| >gnl|CDD|191120 pfam04884, DUF647, Protein of unknown function (DUF647) | Back alignment and domain information |
|---|
Score = 302 bits (775), Expect = e-101
Identities = 109/250 (43%), Positives = 161/250 (64%), Gaps = 3/250 (1%)
Query: 49 VKVVDDSRPVYHRVVDSFLNKFFPSGYPFSVNEGYLRYTQFRALQHFTSAALSVLSTQSL 108
K+ + + R+V S LN F P GYP SV E YL Y + +LQ F+S+ VL+TQ+L
Sbjct: 1 SKLDLKAGKLRSRLVSSLLNVFLPEGYPDSVTEDYLPYQLWDSLQAFSSSISGVLATQAL 60
Query: 109 LFAAGL--RPTPAQATVVSWILKDGMQHVGKLICSN-LGARMDSEPKRWRILADALYDLG 165
L G+ A + WILKDG +G+++ ++ LG+ +DSEPK+WR+LAD L DL
Sbjct: 61 LEGVGVGSSSALPTAAAILWILKDGTGRLGRILFAHRLGSALDSEPKKWRLLADVLNDLA 120
Query: 166 TGLEVLSPLCPQLFLEMAGLGNFAKGIAVVAARATRLPIYSSFAKEGNLSDLFAKGEAIS 225
GLE+L+PL PQLFL +A N AK +A VAA ATR + + FA GNL+D+ AK E+
Sbjct: 121 MGLELLTPLFPQLFLPLASAANVAKSLAGVAAGATRASLTAHFALRGNLADVSAKDESQE 180
Query: 226 TLFNVVGLGAGIQLASTVCSSMQGKMIVGPLLSVIHVYSVIEEMRAAPVNTLNPQRTAMI 285
TL N++GL GI LASTV +S + LLSV+H+Y+ + +R+ + TLN QR +++
Sbjct: 181 TLVNLLGLLVGILLASTVSTSAALTWVSFGLLSVVHLYANYQAVRSVQLRTLNRQRASIV 240
Query: 286 VADFVKTGRI 295
+ +++K+G++
Sbjct: 241 LEEYLKSGKV 250
|
In plants, this domain plays a role in auxin-transport, plant growth and development. Length = 251 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 432 | |||
| KOG4249 | 408 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF04884 | 250 | DUF647: Vitamin B6 photo-protection and homoeostas | 100.0 |
| >KOG4249 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-97 Score=744.56 Aligned_cols=377 Identities=39% Similarity=0.602 Sum_probs=351.5
Q ss_pred CCchhhhhHHHHHHHhhcCCCCCCccccCccchhHHHHhhHHhhhhhhhHhHHHHHHHhCCCCChhHHHHHHHHHHhhhh
Q 013984 54 DSRPVYHRVVDSFLNKFFPSGYPFSVNEGYLRYTQFRALQHFTSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQ 133 (432)
Q Consensus 54 ~~~~~~~~~~~~l~~~FLP~GyP~SVs~dYl~Y~~w~~~q~f~ss~~~vLstqalL~avGv~~a~~~AAa~~WvlKDg~G 133 (432)
++.+..+.+...+..++.|+|||+||++||++|+.|+.+|+|+|.++|+|+|||+|.++|++.+.++|||++||+|||+|
T Consensus 6 ~~~~lpq~~~~l~~~~~~p~gfP~Svn~~yl~y~~wr~vq~f~s~~~gvl~tqSll~~~g~~~a~~sAaai~WvlKDg~G 85 (408)
T KOG4249|consen 6 DSSDLPQYPGKLLSTFLPPEGFPKSVNSSYLPYLLWRAVQHFASALSGVLATQSLLAAVGAGIAAASAAAIRWVLKDGIG 85 (408)
T ss_pred CcccchhhhhhhhhhhcCCcCCCCcCCccccchhhhHHHHHHHhhhhhhhhhHHHHhhhcccccchhhhHhhhhhhcccc
Confidence 34566777888888999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred hHHHHHHhhccCccCCCCceehhhHHHHHHHHHHHHhhhccCCchhHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhhcCC
Q 013984 134 HVGKLICSNLGARMDSEPKRWRILADALYDLGTGLEVLSPLCPQLFLEMAGLGNFAKGIAVVAARATRLPIYSSFAKEGN 213 (432)
Q Consensus 134 ~lg~ilfa~~G~~~D~d~K~wRl~ad~l~d~a~~lEl~tP~~P~~fl~la~la~~~K~i~~va~~atra~i~~hFA~~~N 213 (432)
++|+|+|++.|++||+|||+||++||+|+|+|+++|++||+||++||+++|.+|++|+++.|+..+||++|++|||++||
T Consensus 86 ~lgkll~~~~G~~fD~~pKqwR~~aD~l~~lg~g~elatp~~P~~Fl~~a~t~N~ak~va~v~~~atrs~i~~~fA~~~N 165 (408)
T KOG4249|consen 86 DLGKLLCADEGSKFDDDPKQWRLLADLLWDLGRGLELATPLYPHFFLPLASTGNLAKYVAAVALHATRSPIYQHFAKQGN 165 (408)
T ss_pred hhhhhhhcccccccCCCHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhhhhhhhHHHHHHHHHccchHhHHHHHHHhhcc
Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhHHHHHHHHHHhHhhHhhhhhccccchhHHHHHHHHHHHHHHhhhhhhcccCCccCHHHHHHHHHHHHhcC
Q 013984 214 LSDLFAKGEAISTLFNVVGLGAGIQLASTVCSSMQGKMIVGPLLSVIHVYSVIEEMRAAPVNTLNPQRTAMIVADFVKTG 293 (432)
Q Consensus 214 laDv~AK~~sqet~~~L~Gl~~Gi~l~~~v~~~~~~~~~~~~~l~~~Hl~~ny~avr~v~l~tLN~~R~~iv~~~~l~~g 293 (432)
+|||.||+|||+|+++++|+++||++++.++..+..+++++.+++++|||+||+++|+|+|+|||++|++|++++|+++|
T Consensus 166 ~~dV~Akges~~~~~~laG~g~gili~~~i~~~~~~~l~~f~ils~~hly~~yq~~r~i~l~TLN~~R~~live~~l~~g 245 (408)
T KOG4249|consen 166 FGDVGAKGESQSTASNLAGLGFGILILGRIGACKPLPLVTFGILSTVHLYSNYQSLRHIQLNTLNPDRLRLIVESYLKTG 245 (408)
T ss_pred HHHHhhhhhHHHHHHHHHHhHHHHHhcCcccCCCCcceeeehhhHHHHHHHHHHhhheeeeeccCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998876778888899999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccCcc-CCCcccCCCcceEEecCccccCCc-----hhHHHHHHhcCCCCeEEEecCeEeEEEEcCCCChH
Q 013984 294 RISSPADLRYREDLL-FPGRLIEDAGNVKVGRDPHKVVKP-----SKFHELKELFAEEKFILCLGSRWTDMVLEQNASGE 367 (432)
Q Consensus 294 ~V~sp~evn~~E~i~-~~~~~~~~~~~i~iG~sl~~~~~~-----~~l~~l~~~f~~e~YiL~~~~~~~~V~L~~~at~~ 367 (432)
+||+|.|+|++|+|+ .+++ ...++|++|+++++++++ ++...+.+.|.+|+|++...+++++|+|+++|||+
T Consensus 246 ~VPsp~e~n~~E~i~~~~~~--~~~~~I~~G~~l~~a~~~~~~~~~~~~~l~~~~~~e~~~lt~~K~~~~v~Lk~~Ats~ 323 (408)
T KOG4249|consen 246 QVPSPAEVNEEEPIFGSRPS--ADAWPIRLGVLLHKAVSDTLSSMSMQQLLFGYFETEKLILTGFKGGFVVVLKEGATSV 323 (408)
T ss_pred CCCChhhhhhhccccccccc--ccCcCeeeccchhhhhccccccHHHHHHHHHHHHHhheeeccCCCcEEEEEecCCChH
Confidence 999999999999999 3332 245799999999999873 45566778899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCC-------------CCchhHHHHHHHHHHhhHHHHHHHHHhCCccCCccccccccccCC
Q 013984 368 DALRGWLVAAYAASMAKSFH-------------DPSLTVLQDAYDKMNDVFTPLLSELQAKGWHTDRFLDGTGTRFAW 432 (432)
Q Consensus 368 D~LkA~~hA~~l~~~~~~~~-------------~~~~~~l~~S~~~~~~~f~~fl~~L~~~GW~~~~~ll~~~~~r~~ 432 (432)
|+||+.||++++.+.+..+. .+....++||++++++.|..|+++++++||.|++.++++++.|++
T Consensus 324 DvLr~l~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~esld~~~~~f~~fl~~~~~~GW~t~~~ll~~~~~~~~ 401 (408)
T KOG4249|consen 324 DVLRSLFQACYLYKLMGASRTKRSYLPASKKTLDDVTLRLHESLDMMRDKFIAFLSQMQEQGWITEESLLSPGEQRRY 401 (408)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhccceeehhhcCCcceEEE
Confidence 99999999999999876521 112468999999999999999999999999999999999988764
|
|
| >PF04884 DUF647: Vitamin B6 photo-protection and homoeostasis; InterPro: IPR006968 This is a family of proteins of unknown function, restricted to eukaryotes | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 432 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 3e-08
Identities = 67/494 (13%), Positives = 129/494 (26%), Gaps = 157/494 (31%)
Query: 33 DSVTRHYQFQPDGHLSVKVVDDSRPVYHRVVDSFLNKFFPSGYPFS---VNEGYLRYTQF 89
+ + +Y+F +K + R+ ++ + F+ V+ R +
Sbjct: 85 EVLRINYKFLMS---PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS----RLQPY 137
Query: 90 RALQHFTSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKLICSNLGARMDS 149
L+ Q+LL LRP +L DG+ GK + + +
Sbjct: 138 LKLR------------QALL---ELRPAK-------NVLIDGVLGSGK---TWVALDVCL 172
Query: 150 EPKRWRILADALYDLGTG--------LEVLSPLCPQLFLEMAGLGNFAKGIAV----VAA 197
K + ++ L LE+L L Q+ + + I + + A
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 198 RATRL-------------------PIYSSF---------------------AKEGNLS-- 215
RL +++F A ++S
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 216 ---DLFAKGEAISTLFNVVGLGAGIQLASTVCSSMQGKMIVGPLLSVIHVYSVIEEMRAA 272
E S L + L V + P S+I E
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQ-DLPREVLT-------TNPR-----RLSIIAESIRD 339
Query: 273 PVNT------LNPQRTAMIVADFVKTGRISSPADLR--YREDLLFPGRLIEDAGNVKVGR 324
+ T +N + I+ + + PA+ R + +FP +
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLN---VLEPAEYRKMFDRLSVFP----PS---AHI-- 387
Query: 325 DPHKVVK---PSKFHELKELFAEEKFILCLGSRWTD----------MVLEQNASGEDALR 371
P ++ + + L + + L+ E AL
Sbjct: 388 -PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 372 GWLVAAYAASMAKSFHDPSLTVLQDAY--------------DKMNDVFTPL---LSELQA 414
+V Y D L D Y + +F + L+
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYL-DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505
Query: 415 KGWHTDRFLDGTGT 428
K H + +G+
Sbjct: 506 KIRHDSTAWNASGS 519
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| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00