Citrus Sinensis ID: 014082

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
MPPTTAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccEEEEEcccEEEEEcEEEEEEEccccHHHHHHHHHHccccccccccEEEccccEEEccccccccccccEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHcHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHcccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHcccccc
ccccccccccccccccccccHHcccccccccHHHccccccccccccccccccEEEEEEEcccccHHccccHccccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEccccccccEEEEccccEEEEccEEEEEEcccccHHHHHHHHHcccccccccccEEEEEEEEEEccccccccEEEEEEEEEEEEccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHcEEEccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccEEEEEEEEccccEEcccccccHHHHHcccccEEEEEEccccccccHHHHHHHHcccHHHHcccccEEEEEEccccccccccHHHHHHHHHccccccc
mppttavsasssftlfrvpsswstklkptttyiqipnrffpkhptfkmtTTTIRAAVSIeketpeterpptflresddkesssssaSSVRARFEKMIRDAQDSVCQAIEktdgggkfkedvwsrpgggggisrvlqdgaiwekaGVNVSVVYGVMPPEAYRAAKaaasdekpgpipffaagissvlhpknpfaptlhfnyryfetdapkdtpgaprqwwfgggtdltpayifeedvkhfhstqksacdkfdptfyprfkkwcddYFYIkhrgerrglgglffddlnDYDQEMLLSFATECAnsvipayipiiekrkdtpftdQHKAWQQLRrgryvefnlvydrgttfglktggrIESILVSlpltarweyDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLfsmqnpkegseEWKLLDacinpkewi
mppttavsasssftlfrvpsswstklkptttyiqipnrffpkhptfkMTTTTIRAAvsieketpeterpptflresddkesssssassvRARFEKMIRDAQDSVCQAiektdgggkfkedvwsrpggggGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHstqksacdkfdptFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAwqqlrrgryvefNLVYDRgttfglktggriESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEgseewklldacinpkewi
MPPTTAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIEKetpeterpptFLRESDDKEsssssassVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEayraakaaaSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHrgerrglgglFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI
************FTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAV*****************************************************************************LQDGAIWEKAGVNVSVVYGVMPPEAYR************PIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQ*******EWKLLDACI******
*******************************************************************************************RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMP*******************PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSF**HSGEYASDVTKSLKSWTDEGSFFFF*****************LDACINPKEW*
***********SFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIE******************************ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYR********EKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI
*************************************************TTTIRAAVSIEKETPETERPPTFLRESDDK*****SASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPK***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPPTTAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query431 2.2.26 [Sep-21-2011]
P35055385 Coproporphyrinogen-III ox yes no 0.890 0.997 0.728 1e-179
Q9LR75386 Coproporphyrinogen-III ox yes no 0.814 0.909 0.778 1e-175
Q42946397 Coproporphyrinogen-III ox N/A no 0.895 0.972 0.703 1e-166
Q7XPL2399 Coproporphyrinogen-III ox yes no 0.786 0.849 0.736 1e-166
Q42840391 Coproporphyrinogen-III ox N/A no 0.777 0.856 0.703 1e-151
Q9V3D2390 Coproporphyrinogen-III ox yes no 0.728 0.805 0.498 1e-101
P36551454 Coproporphyrinogen-III ox yes no 0.703 0.667 0.5 9e-98
Q3B7D0443 Coproporphyrinogen-III ox yes no 0.703 0.683 0.502 4e-96
P36552443 Coproporphyrinogen-III ox yes no 0.703 0.683 0.485 1e-92
P11353328 Coproporphyrinogen-III ox yes no 0.703 0.923 0.460 6e-86
>sp|P35055|HEM6_SOYBN Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX PE=2 SV=1 Back     alignment and function desciption
 Score =  627 bits (1616), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 314/431 (72%), Positives = 335/431 (77%), Gaps = 47/431 (10%)

Query: 1   MPPTTAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIE 60
           M   + VSA S    FR     S     T T I +  R +   P+  M    +RA VSIE
Sbjct: 2   MHCASIVSAPSYAFPFR-----SGSASTTPTAISLTKRSWKPPPS--MAKGPVRATVSIE 54

Query: 61  KETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKED 120
           KETPE  RP TFLR  D+ +SS+S    VRARFEKMIR+AQD+VC A+E  DGG +FKED
Sbjct: 55  KETPEANRPETFLRGVDEAQSSTS----VRARFEKMIREAQDTVCSALEAADGGAQFKED 110

Query: 121 VWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAA 180
           VWSRPGGGGGISRVLQDGA+WEKAGVNVSVVYGVMPP+AYRAAK   +D+KPGP+PFFAA
Sbjct: 111 VWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPDAYRAAKGVPTDQKPGPVPFFAA 170

Query: 181 GISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFH 240
           GISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTPAYIFEEDVKHFH
Sbjct: 171 GISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFH 230

Query: 241 STQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATEC 300
           S QK ACDKF+PTFYPRFKKWCDDYFYIKHRGERRGLGG+FFDDLNDYDQEMLLSFATEC
Sbjct: 231 SIQKQACDKFEPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATEC 290

Query: 301 ANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL 360
           ANSVIPAY+PIIEKRKD PF D  KAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL
Sbjct: 291 ANSVIPAYLPIIEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL 350

Query: 361 VSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKL 420
           VSLPLTARWEYDH                                     P+EGSEEWKL
Sbjct: 351 VSLPLTARWEYDH------------------------------------KPEEGSEEWKL 374

Query: 421 LDACINPKEWI 431
           LDACINPKEWI
Sbjct: 375 LDACINPKEWI 385
Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.
Glycine max (taxid: 3847)
EC: 1EC: .EC: 3EC: .EC: 3EC: .EC: 3
>sp|Q9LR75|HEM6_ARATH Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis thaliana GN=CPX PE=1 SV=1 Back     alignment and function description
>sp|Q42946|HEM6_TOBAC Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum GN=CPX PE=2 SV=1 Back     alignment and function description
>sp|Q7XPL2|HEM6_ORYSJ Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=CPX PE=2 SV=2 Back     alignment and function description
>sp|Q42840|HEM6_HORVU Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare GN=CPX PE=2 SV=1 Back     alignment and function description
>sp|Q9V3D2|HEM6_DROME Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox PE=1 SV=1 Back     alignment and function description
>sp|P36551|HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens GN=CPOX PE=1 SV=3 Back     alignment and function description
>sp|Q3B7D0|HEM6_RAT Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus GN=Cpox PE=2 SV=1 Back     alignment and function description
>sp|P36552|HEM6_MOUSE Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus GN=Cpox PE=1 SV=2 Back     alignment and function description
>sp|P11353|HEM6_YEAST Coproporphyrinogen-III oxidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HEM13 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
225464720401 PREDICTED: coproporphyrinogen-III oxidas 0.883 0.950 0.732 0.0
147782894345 hypothetical protein VITISV_044041 [Viti 0.781 0.976 0.809 1e-179
255554717393 coproporphyrinogen III oxidase, putative 0.784 0.860 0.808 1e-179
388515395398 unknown [Lotus japonicus] 0.807 0.874 0.790 1e-178
356553641385 PREDICTED: coproporphyrinogen-III oxidas 0.837 0.937 0.759 1e-177
462260385 RecName: Full=Coproporphyrinogen-III oxi 0.890 0.997 0.728 1e-177
297848564387 coproporphyrinogen III oxidase [Arabidop 0.883 0.984 0.726 1e-175
240254000386 Coproporphyrinogen III oxidase [Arabidop 0.814 0.909 0.778 1e-173
357495593399 Coproporphyrinogen-III oxidase [Medicago 0.902 0.974 0.727 1e-172
449459988398 PREDICTED: coproporphyrinogen-III oxidas 0.788 0.854 0.801 1e-167
>gi|225464720|ref|XP_002263190.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/445 (73%), Positives = 346/445 (77%), Gaps = 64/445 (14%)

Query: 5   TAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRA--------- 55
           TA  +SSS TLF + SS +    P T+            P+F +  T++R          
Sbjct: 3   TATLSSSSLTLFPLSSSPTPPRIPCTSTTLT-------FPSFLVKPTSVRMMGRGSHILP 55

Query: 56  --AVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDG 113
             AV+IEKETPE ERP TFLRESD     + S SSVR RFEKMIRDAQD VCQAIE  DG
Sbjct: 56  PKAVAIEKETPENERPSTFLRESD---GDNHSLSSVRGRFEKMIRDAQDCVCQAIEAADG 112

Query: 114 GGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAAS----- 168
           GGKFKEDVWSRPGGGGGISRVLQDGA+WEKAGVNVSVVYGVMPPEAYRAAK A+S     
Sbjct: 113 GGKFKEDVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPEAYRAAKPASSTDSSS 172

Query: 169 --DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDL 226
             + KPGP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDL
Sbjct: 173 DLNHKPGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDL 232

Query: 227 TPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLN 286
           TPAYIFEEDVKHFHS QKSACDKFDP+FYPRFKKWCDDYFYIKHRGERRGLGG+FFDDLN
Sbjct: 233 TPAYIFEEDVKHFHSVQKSACDKFDPSFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLN 292

Query: 287 DYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGT 346
           DYDQEMLLSFATECANSV+PAY+PIIEKRKD PFTD+HKAWQQLRRGRYVEFNLVYDRGT
Sbjct: 293 DYDQEMLLSFATECANSVVPAYLPIIEKRKDVPFTDRHKAWQQLRRGRYVEFNLVYDRGT 352

Query: 347 TFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLF 406
           TFGLKTGGRIESILVSLPLTARWEYDH                                 
Sbjct: 353 TFGLKTGGRIESILVSLPLTARWEYDH--------------------------------- 379

Query: 407 SMQNPKEGSEEWKLLDACINPKEWI 431
               P+EGSEEWKLLDACINPKEWI
Sbjct: 380 ---QPEEGSEEWKLLDACINPKEWI 401

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147782894|emb|CAN76809.1| hypothetical protein VITISV_044041 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255554717|ref|XP_002518396.1| coproporphyrinogen III oxidase, putative [Ricinus communis] gi|223542241|gb|EEF43783.1| coproporphyrinogen III oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388515395|gb|AFK45759.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356553641|ref|XP_003545162.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|462260|sp|P35055.1|HEM6_SOYBN RecName: Full=Coproporphyrinogen-III oxidase, chloroplastic; Short=Coprogen oxidase; Short=Coproporphyrinogenase; Flags: Precursor gi|414666|emb|CAA50400.1| coproporphyrinogen oxidase [Glycine max] gi|414667|emb|CAA50401.1| coproporphyrinogen oxidase [Glycine max] Back     alignment and taxonomy information
>gi|297848564|ref|XP_002892163.1| coproporphyrinogen III oxidase [Arabidopsis lyrata subsp. lyrata] gi|297338005|gb|EFH68422.1| coproporphyrinogen III oxidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|240254000|ref|NP_171847.4| Coproporphyrinogen III oxidase [Arabidopsis thaliana] gi|13431553|sp|Q9LR75.1|HEM6_ARATH RecName: Full=Coproporphyrinogen-III oxidase, chloroplastic; Short=Coprogen oxidase; Short=Coproporphyrinogenase; AltName: Full=Protein LESION INITIATION 2; Flags: Precursor gi|9280667|gb|AAF86536.1|AC002560_29 F21B7.10 [Arabidopsis thaliana] gi|14624992|dbj|BAB61876.1| coproporphyrinogen III oxidase [Arabidopsis thaliana] gi|17221413|emb|CAD12661.1| coproporphyrinogen III oxidase [Arabidopsis thaliana] gi|332189456|gb|AEE27577.1| Coproporphyrinogen III oxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357495593|ref|XP_003618085.1| Coproporphyrinogen-III oxidase [Medicago truncatula] gi|355519420|gb|AET01044.1| Coproporphyrinogen-III oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449459988|ref|XP_004147728.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
UNIPROTKB|P35055385 CPX "Coproporphyrinogen-III ox 0.872 0.976 0.709 5.6e-154
TAIR|locus:2825062386 LIN2 "LESION INITIATION 2" [Ar 0.842 0.940 0.720 7.3e-152
UNIPROTKB|Q42946397 CPX "Coproporphyrinogen-III ox 0.844 0.916 0.713 1.4e-150
UNIPROTKB|Q7XPL2399 CPX "Coproporphyrinogen-III ox 0.788 0.852 0.698 5e-140
UNIPROTKB|Q42840391 CPX "Coproporphyrinogen-III ox 0.772 0.851 0.669 2.9e-131
FB|FBgn0021944390 Coprox "Coproporphyrinogen oxi 0.740 0.817 0.504 3.4e-92
ZFIN|ZDB-GENE-030131-9884449 cpox "coproporphyrinogen oxida 0.691 0.663 0.535 4.4e-90
UNIPROTKB|P36551454 CPOX "Coproporphyrinogen-III o 0.698 0.662 0.529 3.9e-89
RGD|1311817443 Cpox "coproporphyrinogen oxida 0.698 0.679 0.529 4.4e-88
UNIPROTKB|F1NR99357 CPOX "Uncharacterized protein" 0.696 0.840 0.516 5.6e-88
UNIPROTKB|P35055 CPX "Coproporphyrinogen-III oxidase, chloroplastic" [Glycine max (taxid:3847)] Back     alignment and assigned GO terms
 Score = 1405 (499.6 bits), Expect = 5.6e-154, Sum P(2) = 5.6e-154
 Identities = 276/389 (70%), Positives = 296/389 (76%)

Query:     7 VSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIEKXXXXX 66
             VSA S    FR  S+ ST    T T I +  R +   P+  M    +RA VSIEK     
Sbjct:     8 VSAPSYAFPFRSGSA-ST----TPTAISLTKRSWKPPPS--MAKGPVRATVSIEKETPEA 60

Query:    67 XXXXXFLRESDDKEXXXXXXXXVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPG 126
                  FLR  D+ +        VRARFEKMIR+AQD+VC A+E  DGG +FKEDVWSRPG
Sbjct:    61 NRPETFLRGVDEAQSSTS----VRARFEKMIREAQDTVCSALEAADGGAQFKEDVWSRPG 116

Query:   127 GGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVL 186
             GGGGISRVLQDGA+WEKAGVNVSVVYGVMPP+         +D+KPGP+PFFAAGISSVL
Sbjct:   117 GGGGISRVLQDGAVWEKAGVNVSVVYGVMPPDAYRAAKGVPTDQKPGPVPFFAAGISSVL 176

Query:   187 HPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSA 246
             HPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTPAYIFEEDVKHFHS QK A
Sbjct:   177 HPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSIQKQA 236

Query:   247 CDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIP 306
             CDKF+PTFYPRFKKWCDDYFYIKH          FFDDLNDYDQEMLLSFATECANSVIP
Sbjct:   237 CDKFEPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATECANSVIP 296

Query:   307 AYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLT 366
             AY+PIIEKRKD PF D  KAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLT
Sbjct:   297 AYLPIIEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLT 356

Query:   367 ARWEYDHVSFLEHSGEYAS-DVTKSLKSW 394
             ARWEYDH    E S E+   D   + K W
Sbjct:   357 ARWEYDHKPE-EGSEEWKLLDACINPKEW 384
GO:0042803 "protein homodimerization activity" evidence=ISS
TAIR|locus:2825062 LIN2 "LESION INITIATION 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q42946 CPX "Coproporphyrinogen-III oxidase, chloroplastic" [Nicotiana tabacum (taxid:4097)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XPL2 CPX "Coproporphyrinogen-III oxidase, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q42840 CPX "Coproporphyrinogen-III oxidase, chloroplastic" [Hordeum vulgare (taxid:4513)] Back     alignment and assigned GO terms
FB|FBgn0021944 Coprox "Coproporphyrinogen oxidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9884 cpox "coproporphyrinogen oxidase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P36551 CPOX "Coproporphyrinogen-III oxidase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1311817 Cpox "coproporphyrinogen oxidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NR99 CPOX "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B7N626HEM6_ECOLU1, ., 3, ., 3, ., 30.50710.62640.9030yesno
Q83QN1HEM6_SHIFL1, ., 3, ., 3, ., 30.50710.62640.9030yesno
Q3KKE0HEM6_PSEPF1, ., 3, ., 3, ., 30.51260.61710.875yesno
Q7XPL2HEM6_ORYSJ1, ., 3, ., 3, ., 30.73640.78650.8496yesno
A9QZK6HEM6_YERPG1, ., 3, ., 3, ., 30.50170.63570.8867yesno
A6UX86HEM6_PSEA71, ., 3, ., 3, ., 30.50170.63100.8918yesno
Q32DB7HEM6_SHIDS1, ., 3, ., 3, ., 30.50710.62640.9030yesno
Q1C5T7HEM6_YERPA1, ., 3, ., 3, ., 30.50170.63570.8867yesno
B1JSJ6HEM6_YERPY1, ., 3, ., 3, ., 30.50170.63570.8867yesno
Q7NEK3HEM6_GLOVI1, ., 3, ., 3, ., 30.50900.60780.9065yesno
A4XNB8HEM6_PSEMY1, ., 3, ., 3, ., 30.50900.61710.875yesno
Q668I6HEM6_YERPS1, ., 3, ., 3, ., 30.50170.63570.8867yesno
Q21PU0HEM6_SACD21, ., 3, ., 3, ., 30.50510.64500.9174yesno
B2K962HEM6_YERPB1, ., 3, ., 3, ., 30.50170.63570.8867yesno
A7FG82HEM6_YERP31, ., 3, ., 3, ., 30.50170.63570.8867yesno
B8GTF9HEM6_THISH1, ., 3, ., 3, ., 30.50360.61020.8651yesno
Q9UTE2HEM6_SCHPO1, ., 3, ., 3, ., 30.50840.66580.9198yesno
Q1I2G6HEM6_PSEE41, ., 3, ., 3, ., 30.51260.61710.8778yesno
B0KF35HEM6_PSEPG1, ., 3, ., 3, ., 30.51620.61710.8778yesno
Q42946HEM6_TOBAC1, ., 3, ., 3, ., 30.70320.89550.9722N/Ano
B7V0Q9HEM6_PSEA81, ., 3, ., 3, ., 30.50170.63100.8918yesno
A4TMK2HEM6_YERPP1, ., 3, ., 3, ., 30.50170.63570.8867yesno
B1J4A2HEM6_PSEPW1, ., 3, ., 3, ., 30.51260.61710.8778yesno
A5VWK4HEM6_PSEP11, ., 3, ., 3, ., 30.51980.61710.8778yesno
Q42840HEM6_HORVU1, ., 3, ., 3, ., 30.70340.77720.8567N/Ano
Q4KKQ4HEM6_PSEF51, ., 3, ., 3, ., 30.50900.61710.8721yesno
Q1CJZ7HEM6_YERPN1, ., 3, ., 3, ., 30.50170.63570.8867yesno
P35055HEM6_SOYBN1, ., 3, ., 3, ., 30.72850.89090.9974yesno
Q8ZCF9HEM6_YERPE1, ., 3, ., 3, ., 30.50170.63570.8867yesno
P43898HEM6_PSEAE1, ., 3, ., 3, ., 30.50170.63100.8918yesno
Q9LR75HEM6_ARATH1, ., 3, ., 3, ., 30.77830.81430.9093yesno
Q0VTD7HEM6_ALCBS1, ., 3, ., 3, ., 30.52510.61940.8841yesno
Q02V57HEM6_PSEAB1, ., 3, ., 3, ., 30.50170.63100.8918yesno
B1LMN0HEM6_ECOSM1, ., 3, ., 3, ., 30.50170.62410.8996yesno
Q3B7D0HEM6_RAT1, ., 3, ., 3, ., 30.50280.70300.6839yesno
Q88RQ6HEM6_PSEPK1, ., 3, ., 3, ., 30.50900.61710.8778yesno
Q0T273HEM6_SHIF81, ., 3, ., 3, ., 30.50710.62640.9030yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.3.30.691
3rd Layer1.3.3.30.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
PLN02873274 PLN02873, PLN02873, coproporphyrinogen-III oxidase 0.0
pfam01218296 pfam01218, Coprogen_oxidas, Coproporphyrinogen III 0.0
PRK05330300 PRK05330, PRK05330, coproporphyrinogen III oxidase 1e-153
COG0408303 COG0408, HemF, Coproporphyrinogen III oxidase [Coe 1e-138
>gnl|CDD|215471 PLN02873, PLN02873, coproporphyrinogen-III oxidase Back     alignment and domain information 
 Score =  548 bits (1414), Expect = 0.0
 Identities = 221/310 (71%), Positives = 241/310 (77%), Gaps = 39/310 (12%)

Query: 125 PGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAA---SDEKPGPIPFFAAG 181
           PGGGGGISRVLQDG ++EKAGVNVSVVYG MPPEAYRAA         +  G +PFFAAG
Sbjct: 1   PGGGGGISRVLQDGNVFEKAGVNVSVVYGTMPPEAYRAATGRGSRKGGDPAGGVPFFAAG 60

Query: 182 ISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHS 241
           +SSV+HPKNP APT HFNYRYFETDAPKD PGAPRQWWFGGGTDLTP+Y+FEEDVKHFH 
Sbjct: 61  LSSVMHPKNPMAPTFHFNYRYFETDAPKDVPGAPRQWWFGGGTDLTPSYLFEEDVKHFHG 120

Query: 242 TQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECA 301
           T K  CDK DP FYPRFKKWCDDYFYIKHRGERRGLGG+FFDDLND DQE LL+FAT+ A
Sbjct: 121 TYKDVCDKHDPEFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDRDQEDLLAFATDVA 180

Query: 302 NSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILV 361
           NSV+PAY+PI+EKRKD PFT++ KAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILV
Sbjct: 181 NSVVPAYLPIVEKRKDDPFTEEQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILV 240

Query: 362 SLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLL 421
           SLP TARWEYDH                                     P+EGSEE +LL
Sbjct: 241 SLPPTARWEYDHQ------------------------------------PEEGSEEAELL 264

Query: 422 DACINPKEWI 431
           DA  NP+EW+
Sbjct: 265 DALRNPREWV 274

Length = 274
>gnl|CDD|216370 pfam01218, Coprogen_oxidas, Coproporphyrinogen III oxidase Back     alignment and domain information
>gnl|CDD|235413 PRK05330, PRK05330, coproporphyrinogen III oxidase; Provisional Back     alignment and domain information
>gnl|CDD|223485 COG0408, HemF, Coproporphyrinogen III oxidase [Coenzyme metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 431
KOG1518382 consensus Coproporphyrinogen III oxidase CPO/HEM13 100.0
PRK05330300 coproporphyrinogen III oxidase; Provisional 100.0
PF01218296 Coprogen_oxidas: Coproporphyrinogen III oxidase; I 100.0
COG0408303 HemF Coproporphyrinogen III oxidase [Coenzyme meta 100.0
PLN02873274 coproporphyrinogen-III oxidase 100.0
>KOG1518 consensus Coproporphyrinogen III oxidase CPO/HEM13 [Coenzyme transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2e-149  Score=1086.17  Aligned_cols=375  Identities=62%  Similarity=1.087  Sum_probs=340.1

Q ss_pred             ccccceeeeecCcc---cccccCCCccccccCcccCCCCCCCcceeeeeccccccCCCCCCCCCCccccCCC-CccCCCC
Q 014082            9 ASSSFTLFRVPSSW---STKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIEKETPETERPPTFLRESD-DKESSSS   84 (431)
Q Consensus         9 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~   84 (431)
                      |+||++|..++.-+   ++++.-+++. .   .-+.+ .-+.+++++.++. +|+++++..+.|  |+.+++ |...+..
T Consensus         2 ~rh~~~l~s~gtfq~~~~~rg~~srg~-~---lgtgl-~~~~~~~~ah~~~-ai~pkv~gt~~~--fm~~~~sD~~~l~~   73 (382)
T KOG1518|consen    2 ARHSSTLLSSGTFQPFSSHRGHYSRGS-T---LGTGL-PIRNKPNLAHRCS-AIEPKVPGTERP--FMAPPDSDDVTLPS   73 (382)
T ss_pred             CccccCCcCCCcccccccccCCCCCCc-c---cccCc-ccccccchhhhhh-hhcCCCCCcccc--cccCCCCCcccCCC
Confidence            56788887776555   5555555552 1   12222 2233556665555 499999998888  555554 4556677


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeecccccCCCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHcc
Q 014082           85 SASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAK  164 (431)
Q Consensus        85 ~~~~~r~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~~  164 (431)
                      ...+||++||.+|++.|++||++||++|++.+|.+|.|+|++||||||||||||+||||||||||+|+|.|||+|+++|+
T Consensus        74 ~~~~ir~~mE~lI~~~Qaevc~aleaidgg~kF~~D~W~r~eGGgGiscVlQDG~vFEKaGVnvSVV~G~l~p~Av~~mr  153 (382)
T KOG1518|consen   74 SSSSIRAQMETLIREAQAEVCQALEAIDGGQKFKVDRWTRGEGGGGISCVLQDGNVFEKAGVNVSVVYGVLPPEAVQAMR  153 (382)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHhccccccceeeeecCCCCCceEEEEccCCeeecCCceEEEEeccCCHHHHHHHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC-CCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCCCCCCChhhHHHHHHHH
Q 014082          165 AAASDEKP-GPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQ  243 (431)
Q Consensus       165 ~~~~~~~~-~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~eEDa~hFH~~l  243 (431)
                      ++++..+. +.+||||+|||+||||+|||+||+|+||||||+   .+.+|. ++||||||+||||+|++|||++|||+++
T Consensus       154 a~~k~lk~~~~lpFfA~GvS~ViHP~NPhaPT~HfNYRYFE~---~~~dg~-kqWWFGGG~DlTPsyl~eeD~~hFH~~~  229 (382)
T KOG1518|consen  154 ARHKNLKPTGPLPFFAAGVSSVIHPKNPHAPTTHFNYRYFET---ENADGV-KQWWFGGGADLTPSYLFEEDGKHFHQLH  229 (382)
T ss_pred             hcccCCCCCCCCceeeccceeeeccCCCCCCceeeeeeEEEE---ecCCCc-EEEEecCCccCChhhhhhhhHHHHHHHH
Confidence            99986544 789999999999999999999999999999999   455665 8899999999999999999999999999


Q ss_pred             HHhhhcCCCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhhcHHHHHHhCCCCCCHH
Q 014082          244 KSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQ  323 (431)
Q Consensus       244 K~aCD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~aYlPIv~rr~~~pyte~  323 (431)
                      |+|||+|||++||+||||||+||||+||+|+|||||||||||++.|.|+.|+|+++|+++|+|+|+|||+|||+++||++
T Consensus       230 K~AcD~hdp~~YPrFKKWcDdYF~IkHR~E~RGiGGIFFDDld~~d~ee~f~fv~~Ca~avvPsYipiv~krkdmeft~~  309 (382)
T KOG1518|consen  230 KEACDKHDPTFYPRFKKWCDDYFYIKHRKERRGIGGIFFDDLDEPDPEELFSFVTDCARAVVPSYIPIVEKRKDMEFTEQ  309 (382)
T ss_pred             HHHhhccCCccchhHHhhhhhheeeeeccccccccceecccCCCCCHHHHHHHHHHHHHhhccccchhhhhhcCCCcChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcccceeEEEEeeeccceecccc-CCceeeeeeeCCCcccccccccccccccCccccccccccccCCCCCcccc
Q 014082          324 HKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFF  402 (431)
Q Consensus       324 er~wQl~RRGRYVEFNLvyDRGTkFGL~T-ggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (431)
                      ||+||+|||||||||||+|||||+|||+| |.||||||||||.+|+|+|||                             
T Consensus       310 ek~wQ~lRRGrYvEFNliYDRGT~FGL~tpgsRiESILmsLPlha~w~y~h-----------------------------  360 (382)
T KOG1518|consen  310 EKQWQQLRRGRYVEFNLIYDRGTKFGLKTPGSRIESILMSLPLHASWEYMH-----------------------------  360 (382)
T ss_pred             HHHHHHHhccceEEEEEEEecCceeeccCCcchhHhHhhcccchhhhhhhc-----------------------------
Confidence            99999999999999999999999999999 669999999999999999999                             


Q ss_pred             ccccccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082          403 FSLFSMQNPKEGSEEWKLLDACINPKEWI  431 (431)
Q Consensus       403 ~~~~~~~~p~~gs~E~~l~~~l~~PrdWv  431 (431)
                             .|.+||+|++||+|+.+|||||
T Consensus       361 -------~P~~~sre~~ll~V~~~P~eWv  382 (382)
T KOG1518|consen  361 -------EPKQGSREAKLLEVTHTPREWV  382 (382)
T ss_pred             -------CCCCcchhhHHHHhhcCCcccC
Confidence                   9999999999999999999997

>PRK05330 coproporphyrinogen III oxidase; Provisional Back     alignment and domain information
>PF01218 Coprogen_oxidas: Coproporphyrinogen III oxidase; InterPro: IPR001260 Coprogen oxidase (i Back     alignment and domain information
>COG0408 HemF Coproporphyrinogen III oxidase [Coenzyme metabolism] Back     alignment and domain information
>PLN02873 coproporphyrinogen-III oxidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
2aex_A346 The 1.58a Crystal Structure Of Human Coproporphyrin 2e-90
1tkl_A326 Yeast Oxygen-Dependent Coproporphyrinogen Oxidase L 2e-79
1txn_A328 Crystal Structure Of Coproporphyrinogen Iii Oxidase 2e-78
3ejo_A310 Coproporphyrinogen Iii Oxidase From Leishmania Dono 3e-64
3dwr_A309 Leishmania Major Coproporphyrinogen Iii Oxidase Wit 1e-63
3e8j_A306 Coproporphyrinogen Iii Oxidase From Leishmania Naif 5e-63
1vju_A309 Coproporphyrinogen Iii Oxidase From Leishmania Majo 8e-63
1tk1_A260 Yeast Oxygen-Dependent Coproporphyrinogen Oxidase L 3e-61
>pdb|2AEX|A Chain A, The 1.58a Crystal Structure Of Human Coproporphyrinogen Oxidase Reveals The Structural Basis Of Hereditary Coproporphyria Length = 346 Back     alignment and structure 
Iteration: 1

 Score =  329 bits (843), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 164/346 (47%), Positives = 208/346 (60%), Gaps = 43/346 (12%)
Query: 89  VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
           ++ + E +I + Q  VCQA+ + DGG  F  D W R  GGGGIS VLQDG ++EKAGV++
Sbjct: 40  MKTKMELLILETQAQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSI 99
Query: 149 SVVYGVMPPEXXXXXXXXXS--DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
           SVV+G +  E              K G +PF A G+SSV+HPKNP APT+HFNYRYFE +
Sbjct: 100 SVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVE 159
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
                    +QWWFGGG DLTP Y+ +ED  HFH T K ACD+  P  YP+FKKWCDDYF
Sbjct: 160 EADGN----KQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYF 215
Query: 267 YIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
           +I H          FFDDL+   +E +  F   CA +V+P+YIP+++K  D  FT Q K 
Sbjct: 216 FIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKL 275
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYAS 385
           WQQLRRGRYVEFNL+YDRGT FGL T G RIESIL+SLPLTARWEY              
Sbjct: 276 WQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEY-------------- 321
Query: 386 DVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431
                                 M +P E S+E ++L+   +P++W+
Sbjct: 322 ----------------------MHSPSENSKEAEILEVLRHPRDWV 345
>pdb|1TKL|A Chain A, Yeast Oxygen-Dependent Coproporphyrinogen Oxidase Length = 326 Back     alignment and structure
>pdb|1TXN|A Chain A, Crystal Structure Of Coproporphyrinogen Iii Oxidase Length = 328 Back     alignment and structure
>pdb|3EJO|A Chain A, Coproporphyrinogen Iii Oxidase From Leishmania Donovani Length = 310 Back     alignment and structure
>pdb|3DWR|A Chain A, Leishmania Major Coproporphyrinogen Iii Oxidase With Bound Ligand Length = 309 Back     alignment and structure
>pdb|3E8J|A Chain A, Coproporphyrinogen Iii Oxidase From Leishmania Naiffi Length = 306 Back     alignment and structure
>pdb|1VJU|A Chain A, Coproporphyrinogen Iii Oxidase From Leishmania Major Length = 309 Back     alignment and structure
>pdb|1TK1|A Chain A, Yeast Oxygen-Dependent Coproporphyrinogen Oxidase Length = 260 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
2aex_A346 Coproporphyrinogen III oxidase, mitochondrial; FLA 0.0
1vju_A309 Coproporphyrinogen III oxidase; structural genomic 0.0
1txn_A328 Coproporphyrinogen III oxidase; structural genomic 0.0
>2aex_A Coproporphyrinogen III oxidase, mitochondrial; FLAT beta-sheet sandwiched by helices, oxidoreductase; HET: CIT; 1.58A {Homo sapiens} Length = 346 Back     alignment and structure
 Score =  544 bits (1405), Expect = 0.0
 Identities = 178/382 (46%), Positives = 229/382 (59%), Gaps = 44/382 (11%)

Query: 54  RAAVSIEKETPETERPPTFLRESD-DKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTD 112
                 E+E     R  +F+     D          ++ + E +I + Q  VCQA+ + D
Sbjct: 4   SLGRPEEEEDELAHRCSSFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALAQVD 63

Query: 113 GGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKP 172
           GG  F  D W R  GGGGIS VLQDG ++EKAGV++SVV+G +  EA +  ++     K 
Sbjct: 64  GGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEAAKQMRSRGKVLKT 123

Query: 173 --GPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAY 230
             G +PF A G+SSV+HPKNP APT+HFNYRYFE +          QWWFGGG DLTP Y
Sbjct: 124 KDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGNK----QWWFGGGCDLTPTY 179

Query: 231 IFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQ 290
           + +ED  HFH T K ACD+  P  YP+FKKWCDDYF+I HRGERRG+GG+FFDDL+   +
Sbjct: 180 LNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSK 239

Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
           E +  F   CA +V+P+YIP+++K  D  FT Q K WQQLRRGRYVEFNL+YDRGT FGL
Sbjct: 240 EEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGL 299

Query: 351 KT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQ 409
            T G RIESIL+SLPLTARWEY H                                    
Sbjct: 300 FTPGSRIESILMSLPLTARWEYMH------------------------------------ 323

Query: 410 NPKEGSEEWKLLDACINPKEWI 431
           +P E S+E ++L+   +P++W+
Sbjct: 324 SPSENSKEAEILEVLRHPRDWV 345
>1vju_A Coproporphyrinogen III oxidase; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.40A {Leishmania major} SCOP: d.248.1.1 PDB: 2qt8_A* 3dwr_A 3dws_A* 3ejo_A 3e8j_A* Length = 309 Back     alignment and structure
>1txn_A Coproporphyrinogen III oxidase; structural genomics, dimer, novel fold, PSI, protein structu initiative; 1.70A {Saccharomyces cerevisiae} SCOP: d.248.1.1 PDB: 1tkl_A 1tlb_A 1tk1_A Length = 328 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query431
2aex_A346 Coproporphyrinogen III oxidase, mitochondrial; FLA 100.0
1txn_A328 Coproporphyrinogen III oxidase; structural genomic 100.0
1vju_A309 Coproporphyrinogen III oxidase; structural genomic 100.0
>2aex_A Coproporphyrinogen III oxidase, mitochondrial; FLAT beta-sheet sandwiched by helices, oxidoreductase; HET: CIT; 1.58A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=8.6e-154  Score=1134.20  Aligned_cols=321  Identities=55%  Similarity=1.050  Sum_probs=305.4

Q ss_pred             ccccCCC-CccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeecccccCCCCCceEEEeeCCceEEeeeeEEE
Q 014082           71 TFLRESD-DKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVS  149 (431)
Q Consensus        71 ~~~~~~~-~~~~~~~~~~~~r~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~GGGG~s~Vl~dG~VFEKaGVN~S  149 (431)
                      +||.+++ +.+.+.+++++||++|++||+.||++||++||++|++++|++|.|+|++||||+||||+||+||||||||||
T Consensus        21 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~lQ~~Ic~~lE~~dg~~~F~~d~W~R~~GGGG~s~Vl~~G~VFEKaGVN~S  100 (346)
T 2aex_A           21 SFMAPPVTDLGELRRRPGDMKTKMELLILETQAQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSIS  100 (346)
T ss_dssp             TSSSCCSSCHHHHHHCTTSHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEEETTTEEEEEEEEESCSSEEEEEEEEE
T ss_pred             cccccCcCCHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEecCccCCCCCCeEEEEeCCcEEEecceEEE
Confidence            4566655 445566778899999999999999999999999998789999999999999999999999999999999999


Q ss_pred             EEeccCCHHHHHHccccccCC--CCCCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCC
Q 014082          150 VVYGVMPPEAYRAAKAAASDE--KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLT  227 (431)
Q Consensus       150 ~V~G~lpp~aa~~~~~~~~~~--~~~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLT  227 (431)
                      +|||+++|+++++|+++++..  ..++.+|+||||||||||+||||||||||||||++.    .+|..++||||||+|||
T Consensus       101 ~V~G~~~p~~~~~~~~~~~~l~~~~~~~~F~A~GvSlViHP~NP~vPTvH~N~R~f~~~----~~g~~~~wWFGGG~DLT  176 (346)
T 2aex_A          101 VVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVE----EADGNKQWWFGGGCDLT  176 (346)
T ss_dssp             EEEEECCHHHHHHHHHTTCCCCCBTTBCEEEEEEEEEEEEESSTTSCEEEEEEEEEEEE----CSTTCEEEEEEEEEEEE
T ss_pred             EEeccCChHHHHhcCCcccccccccCCCCeEEEEeeEEEecCCCCCCceeeeEEEEEee----cCCCCCceeecCCccCC
Confidence            999999999999999976543  346789999999999999999999999999999993    45666789999999999


Q ss_pred             CCCCChhhHHHHHHHHHHhhhcCCCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhh
Q 014082          228 PAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPA  307 (431)
Q Consensus       228 P~Y~~eEDa~hFH~~lK~aCD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~a  307 (431)
                      |||+++||++|||+++|++||+||+++||+||+|||+|||||||+|+||||||||||||++++|++|+|+++||++||+|
T Consensus       177 P~Y~~~eD~~hFH~~~K~aCd~~~~~~Yp~fK~wCDeYFyi~HR~E~RGVGGIFfDdln~~~~e~~faf~~~vg~afl~a  256 (346)
T 2aex_A          177 PTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPS  256 (346)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTEEGGGTEESSSEEEEEEEECCSCHHHHHHHHHHHHHTHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHhhcChHhHHHHHHHHHHhcChhhcCCCCCCCeEecCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHhCCCCCCHHHHHHHHHcccceeEEEEeeeccceecccc-CCceeeeeeeCCCcccccccccccccccCccccc
Q 014082          308 YIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYASD  386 (431)
Q Consensus       308 YlPIv~rr~~~pyte~er~wQl~RRGRYVEFNLvyDRGTkFGL~T-ggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~  386 (431)
                      |+|||+||+++||||+||+|||+||||||||||||||||+||||| |||||||||||||+|+|+|+|             
T Consensus       257 Y~pIv~rr~~~~~te~er~~Ql~RRGRYVEFNLvyDRGT~FGL~Tpggr~ESILmSLPp~a~W~Y~~-------------  323 (346)
T 2aex_A          257 YIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMH-------------  323 (346)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHCCCCTTGGGSSSCCHHHHHHHCCSCCCCCCCC-------------
T ss_pred             HHHHHHHhCCCCCCHHHHHHHHhhCCeeeEEEEEeecCccccccCCCCChhhhhhcCCCcCccccCC-------------
Confidence            999999999999999999999999999999999999999999999 999999999999999999999             


Q ss_pred             cccccccCCCCCccccccccccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082          387 VTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI  431 (431)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~p~~gs~E~~l~~~l~~PrdWv  431 (431)
                                             +|++||+|++|+++|++|||||
T Consensus       324 -----------------------~pe~gS~Ea~l~~~~~~prdW~  345 (346)
T 2aex_A          324 -----------------------SPSENSKEAEILEVLRHPRDWV  345 (346)
T ss_dssp             -----------------------CCCTTSHHHHHHHHHHSCCCCC
T ss_pred             -----------------------CCCCCCHHHHHHHHhcCccccC
Confidence                                   9999999999999999999997
>1txn_A Coproporphyrinogen III oxidase; structural genomics, dimer, novel fold, PSI, protein structu initiative; 1.70A {Saccharomyces cerevisiae} SCOP: d.248.1.1 PDB: 1tkl_A 1tlb_A 1tk1_A Back     alignment and structure
>1vju_A Coproporphyrinogen III oxidase; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.40A {Leishmania major} SCOP: d.248.1.1 PDB: 2qt8_A* 3dwr_A 3dws_A* 3ejo_A 3e8j_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 431
d1tkla_325 d.248.1.1 (A:) Coproporphyrinogen III oxidase {Bak 1e-108
d1vjua_302 d.248.1.1 (A:) Hypothetical protein Lmaj006828 {Le 1e-106
>d1tkla_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Coproporphyrinogen III oxidase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  319 bits (819), Expect = e-108
 Identities = 161/363 (44%), Positives = 209/363 (57%), Gaps = 53/363 (14%)

Query: 82  SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRP-GGGGGISRVLQDGAI 140
                  +R + E +IR  Q  + Q +E  D   KF  D W+R   GGGG S V+QDG  
Sbjct: 2   QDPRNLPIRQQMEALIRRKQAEITQGLESIDTV-KFHADTWTRGNDGGGGTSMVIQDGTT 60

Query: 141 WEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPI-----------PFFAAGISSVLHPK 189
           +EK GVNVSVVYG + P A  A KA   + +                FFA G+S V+HP 
Sbjct: 61  FEKGGVNVSVVYGQLSPAAVSAMKADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPV 120

Query: 190 NPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDK 249
           NP APT H NYRYFET    +  G P+ WWFGGG DLTP+Y++EED + FH   K A DK
Sbjct: 121 NPHAPTTHLNYRYFET---WNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDK 177

Query: 250 FDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYI 309
            D   YPRFKKWCD+YFYI HR E RG+GG+FFDD ++ D + +L    +C ++ +P+Y+
Sbjct: 178 HDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYL 237

Query: 310 PIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTAR 368
            I+++RKD P+T + + WQ +RRGRYVEFNL+YDRGT FGL+T G R+ESIL+SLP  A 
Sbjct: 238 TIVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHAS 297

Query: 369 WEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPK 428
           W Y+H                                    +P  GS E KLL+    P+
Sbjct: 298 WLYNH------------------------------------HPAPGSREAKLLEVTTKPR 321

Query: 429 EWI 431
           EW+
Sbjct: 322 EWV 324
>d1vjua_ d.248.1.1 (A:) Hypothetical protein Lmaj006828 {Leishmania major [TaxId: 5664]} Length = 302 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query431
d1tkla_325 Coproporphyrinogen III oxidase {Baker's yeast (Sac 100.0
d1vjua_302 Hypothetical protein Lmaj006828 {Leishmania major 100.0
>d1tkla_ d.248.1.1 (A:) Coproporphyrinogen III oxidase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Coproporphyrinogen III oxidase
superfamily: Coproporphyrinogen III oxidase
family: Coproporphyrinogen III oxidase
domain: Coproporphyrinogen III oxidase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.1e-144  Score=1061.08  Aligned_cols=307  Identities=52%  Similarity=1.035  Sum_probs=293.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeecccccC-CCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHc
Q 014082           85 SASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRP-GGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAA  163 (431)
Q Consensus        85 ~~~~~r~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~-~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~  163 (431)
                      .+.+||++|++||+.||++||++||++| +++|++|.|+|+ +||||+||||+||+||||||||||+|+|+++|+++++|
T Consensus         5 ~~~~mr~~~e~~~~~lQ~~Ic~~lE~ld-~~~F~~d~W~R~~~gGGG~s~vl~~G~VfEKaGVN~S~V~G~~~p~~a~~~   83 (325)
T d1tkla_           5 RNLPIRQQMEALIRRKQAEITQGLESID-TVKFHADTWTRGNDGGGGTSMVIQDGTTFEKGGVNVSVVYGQLSPAAVSAM   83 (325)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHTTS-SSCCEEEEEECGGGCEEEEEEEEESCSSEEEEEEEEEEEEEEECHHHHTTT
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhc-CCCceeeccccCCCCCCceEEEEcCCcEEEeeeEEEEEEEeecCHHHHHhh
Confidence            3567999999999999999999999999 578999999995 78999999999999999999999999999999999999


Q ss_pred             cccccCC-----------CCCCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCCCCCCC
Q 014082          164 KAAASDE-----------KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIF  232 (431)
Q Consensus       164 ~~~~~~~-----------~~~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~  232 (431)
                      +++++..           ...+.+|+||||||||||+||+|||+|||||||++   .+.+|....||||||+||||||++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~f~AtGiSlViHP~NP~vPt~H~N~R~f~~---~~~~~~~~~wWFGGG~DLTP~y~~  160 (325)
T d1tkla_          84 KADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPVNPHAPTTHLNYRYFET---WNQDGTPQTWWFGGGADLTPSYLY  160 (325)
T ss_dssp             GGGCTTCCCCCCSSSSCCCSSCEEEEEEEEEEEEEESSTTSCEEEEEEEEEEE---ECTTSCEEEEEEEEEEEEECSSCC
T ss_pred             hcccccccCcccccccCccccCCceeEeeeeeehcccCCCcchhcccceEEEE---ecCCCCcceeEEeeeecccccccc
Confidence            9876531           12456899999999999999999999999999999   567777788999999999999999


Q ss_pred             hhhHHHHHHHHHHhhhcCCCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhhcHHHH
Q 014082          233 EEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPII  312 (431)
Q Consensus       233 eEDa~hFH~~lK~aCD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~aYlPIv  312 (431)
                      +||++|||+++|++||+||+++|++||||||+|||||||+|+||||||||||||+.++|++|+|+++||++||++|+|||
T Consensus       161 ~eD~~~fH~~lK~~Cd~~~~~~Y~~fKk~CD~YFylpHR~E~RGvGGIFfD~l~~~~~e~~f~f~~~vg~~fl~~Y~~Iv  240 (325)
T d1tkla_         161 EEDGQLFHQLHKDALDKHDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIV  240 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTEEGGGTEESSCCEEEEEEECSSCHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhccCCHHHHHHHHHHhhhhcccccccccccchhhhhhhhcccchHHHHHHHHHHHHhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCHHHHHHHHHcccceeEEEEeeeccceecccc-CCceeeeeeeCCCcccccccccccccccCcccccccccc
Q 014082          313 EKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSL  391 (431)
Q Consensus       313 ~rr~~~pyte~er~wQl~RRGRYVEFNLvyDRGTkFGL~T-ggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~  391 (431)
                      +||++++||++||+|||+||||||||||||||||+|||+| |||||||||||||+|+|+|++                  
T Consensus       241 ~kr~~~~~t~~~r~~Ql~rRGRYvEFNLlyDRGT~FGL~t~G~r~esILmSlPp~a~W~y~~------------------  302 (325)
T d1tkla_         241 KRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWLYNH------------------  302 (325)
T ss_dssp             HTTTTSCCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHSTTCCHHHHGGGSCSEEECCTTC------------------
T ss_pred             HHhccccccHHHHHHHHHhCCceEEEEEEeecCceeeeecCCCCceeEEecCCCCCeeeccC------------------
Confidence            9999999999999999999999999999999999999999 779999999999999999999                  


Q ss_pred             ccCCCCCccccccccccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082          392 KSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI  431 (431)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~p~~gs~E~~l~~~l~~PrdWv  431 (431)
                                        +|++||+|++|+++|++|||||
T Consensus       303 ------------------~~~~~s~e~~l~~~l~~p~~W~  324 (325)
T d1tkla_         303 ------------------HPAPGSREAKLLEVTTKPREWV  324 (325)
T ss_dssp             ------------------CCCTTSHHHHHHHHHHSCCCCC
T ss_pred             ------------------CCCCCCHHHHHHHHHhCccccc
Confidence                              9999999999999999999997
>d1vjua_ d.248.1.1 (A:) Hypothetical protein Lmaj006828 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure