Citrus Sinensis ID: 014093


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
MVKGLQGGDQNLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAAQRLRLPLISKDGEILEDEIEKWSTMSRSSLDSTSTSATISSSSNSMNYTNTSMNSISGGNNALIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDDIDSASGNHMSTARLPERVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDLKRLPDHPSS
cccccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
cccccccccccccHHHHHHHHHHHHHcccccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccHHHccccccHHHHHHHHHHHHHHHHHHHcccccEcccccccHHHHHHHHHEccccccccccEEEEcccccccccccccccHHHHcHccccccccccccccccccEccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
mvkglqggdqnlpadVSQVIDLLERhclapdgslvsksaHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLggirdvqglssqlglksspqVYETLEHRLVVAEAAQRLRlpliskdgeILEDEIEKWstmsrssldststsatissssnsmnytntsmnsisggnnaliagdaeagvggvpnrflgitPAYLWQTqlqqtplsmdtaeYQISVSREIEARLKAKCDKLADAFIDdidsasgnhmstarlPERVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLReyqgvdprfdnIARQYHDIVKKLENMQWTIHQVEMDlkrlpdhpss
mvkglqggdqnlpADVSQVIDLLERHCLApdgslvsksahyDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAAqrlrlpliskdgeiLEDEIEkwstmsrssldststsatissssnsmnyTNTSMNSISGGNNALIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDdidsasgnhmstarlpeRVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGtytqesipALHKIRKYLVEATEEASVAYNKAVTrlreyqgvdprfdnIARQYHDIVKKLENMQWTIHQVEmdlkrlpdhpss
MVKGLQGGDQNLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVqglssqlglkssPQVYETLEHRLVVAEAAQRLRLPLISKDGEILEDEIEKWstmsrssldststsatissssnsmnytntsmnsisGGNNALIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLadafiddidsasGNHMSTARLPERVKMiieeiereeaalredlyaadrKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDLKRLPDHPSS
***************VSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAAQRLRLPLISKDGEIL**********************************************ALIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDDID**************RVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEM***********
************PADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQA*****LGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAA********************KW***************************************************GVPNRFLGITPAYLWQTQLQQT***M**AEY**SVS*EIEARLKAKCDKLADA********************************************RKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKY*********************YQGVDPRFDNIARQYHDIVKKLENMQWTI****************
********DQNLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAAQRLRLPLISKDGEILEDEIEKW*********************NSMNYTNTSMNSISGGNNALIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDDIDSASGNHMSTARLPERVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDLK********
**********NLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAAQRLRLPLISKDGEILEDEIEKWSTMS********T*****************************AGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDDIDSASGNHMSTARLPERVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDL*********
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MVKGLQGGDQNLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAAQRLRLPLISKDGEILEDEIEKWSTMSRSSLDSTSTSATISSSSNSMNYTNTSMNSISGGNNALIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDDIDSASGNHMSTARLPERVKMIxxxxxxxxxxxxxxxxxxxxxFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDLKRLPDHPSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query431 2.2.26 [Sep-21-2011]
Q9H6D7363 HAUS augmin-like complex yes no 0.503 0.597 0.253 6e-09
Q8BFT2363 HAUS augmin-like complex yes no 0.482 0.573 0.231 8e-08
>sp|Q9H6D7|HAUS4_HUMAN HAUS augmin-like complex subunit 4 OS=Homo sapiens GN=HAUS4 PE=1 SV=1 Back     alignment and function desciption
 Score = 62.8 bits (151), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 8/225 (3%)

Query: 197 FLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDDIDSASGNH 256
            LG+  A L    L+  PLS D    +  + +E+E +LK KC  L   + D    A    
Sbjct: 139 LLGLEKADL----LELMPLSEDFVWMRARLQQEVEEQLKKKCFTLL-CYYDPNSDADSET 193

Query: 257 MSTARLPERVKMIIEEIEREEAA---LREDLYAADRKFAEYYNVLEQILGVLIKLVKDLK 313
           +  A++ +  ++++ E ++ + A    +E +   ++K A Y  VL + L +L +L+++ +
Sbjct: 194 VKAAKVWKLAEVLVGEQQQCQDAKSQQKEQMLLLEKKSAAYSQVLLRCLTLLQRLLQEHR 253

Query: 314 LQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKYLVEATEEA 373
           L+ Q + D +   +L  +C  M  KLR+ E  +L  TYT E +     IR  L  A    
Sbjct: 254 LKTQSELDRINAQYLEVKCGAMILKLRMEELKILSDTYTVEKVEVHRLIRDRLEGAIHLQ 313

Query: 374 SVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQV 418
                 +   L  Y+ +   FD + ++Y  + +  EN +W + + 
Sbjct: 314 EQDMENSRQVLNSYEVLGEEFDRLVKEYTVLKQATENKRWALQEF 358




Contributes to mitotic spindle assembly, maintenance of centrosome integrity and completion of cytokinesis as part of the HAUS augmin-like complex.
Homo sapiens (taxid: 9606)
>sp|Q8BFT2|HAUS4_MOUSE HAUS augmin-like complex subunit 4 OS=Mus musculus GN=Haus4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
225460965437 PREDICTED: uncharacterized protein LOC10 1.0 0.986 0.853 0.0
449444050438 PREDICTED: uncharacterized protein LOC10 0.988 0.972 0.819 0.0
255583613432 conserved hypothetical protein [Ricinus 0.990 0.988 0.837 0.0
297852780423 hypothetical protein ARALYDRAFT_474203 [ 0.974 0.992 0.810 0.0
30694827423 uncharacterized protein [Arabidopsis tha 0.974 0.992 0.808 0.0
224114461429 predicted protein [Populus trichocarpa] 0.976 0.981 0.831 0.0
356567344425 PREDICTED: uncharacterized protein LOC10 0.979 0.992 0.762 0.0
357459655424 HAUS augmin-like complex subunit [Medica 0.979 0.995 0.747 0.0
363808200425 uncharacterized protein LOC100786070 [Gl 0.979 0.992 0.767 0.0
217071844393 unknown [Medicago truncatula] 0.897 0.984 0.734 1e-160
>gi|225460965|ref|XP_002280015.1| PREDICTED: uncharacterized protein LOC100253742 [Vitis vinifera] gi|297737439|emb|CBI26640.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/437 (85%), Positives = 399/437 (91%), Gaps = 6/437 (1%)

Query: 1   MVKGLQ--GGDQNLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYL 58
           M KGLQ   G QNLPADV+ +ID LERHCLAPDGSLVSKSA+YDLQLAREEM+RERLRY 
Sbjct: 1   MAKGLQQQAGGQNLPADVTALIDQLERHCLAPDGSLVSKSAYYDLQLAREEMARERLRYF 60

Query: 59  EAMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETLEHRLVVAEAA 118
           EAMAIYCEAIAMVE YQQAVSVANLGGIRDVQGL  QLGLK+SPQVYETLEHRLVVAEAA
Sbjct: 61  EAMAIYCEAIAMVEEYQQAVSVANLGGIRDVQGLYPQLGLKNSPQVYETLEHRLVVAEAA 120

Query: 119 QRLRLPLISKDGEILEDEIEKWSTMSRSSLDSTSTSATISSSSNSMNYTNTSMN-SISGG 177
           QRLRLPLISKDGEI E+EIEKWS MSRSSLDSTSTS TISSSSNS NYTN+S+N +    
Sbjct: 121 QRLRLPLISKDGEIHEEEIEKWSIMSRSSLDSTSTSITISSSSNSTNYTNSSVNITAERA 180

Query: 178 NNALIAGD--AEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLK 235
           +NAL  G   +E  VGGVPNRFLGITPAYLWQTQLQQTPLSMD  +YQ+S+SREIE+RLK
Sbjct: 181 SNALSLGTDTSEPEVGGVPNRFLGITPAYLWQTQLQQTPLSMDMTDYQMSLSREIESRLK 240

Query: 236 AKCDKLADAFI-DDIDSASGNHMSTARLPERVKMIIEEIEREEAALREDLYAADRKFAEY 294
           AKCDKLAD F+ DDIDS+S    S+ARLPERVK+IIEEIEREEAALREDLY+ADRKFAEY
Sbjct: 241 AKCDKLADVFVMDDIDSSSRTQNSSARLPERVKLIIEEIEREEAALREDLYSADRKFAEY 300

Query: 295 YNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQE 354
           YNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEH+LLL TYTQ+
Sbjct: 301 YNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHILLLETYTQD 360

Query: 355 SIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWT 414
           SIPALHKIRKYL+EATEEAS+AYNKAVTRLREYQGVDP FD IARQYH+IVKKLENMQWT
Sbjct: 361 SIPALHKIRKYLLEATEEASIAYNKAVTRLREYQGVDPHFDTIARQYHEIVKKLENMQWT 420

Query: 415 IHQVEMDLKRLPDHPSS 431
           IHQVEMDLKRLPDHPS+
Sbjct: 421 IHQVEMDLKRLPDHPST 437




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444050|ref|XP_004139788.1| PREDICTED: uncharacterized protein LOC101203307 [Cucumis sativus] gi|449518905|ref|XP_004166476.1| PREDICTED: uncharacterized LOC101203307 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255583613|ref|XP_002532562.1| conserved hypothetical protein [Ricinus communis] gi|223527717|gb|EEF29823.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297852780|ref|XP_002894271.1| hypothetical protein ARALYDRAFT_474203 [Arabidopsis lyrata subsp. lyrata] gi|297340113|gb|EFH70530.1| hypothetical protein ARALYDRAFT_474203 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30694827|ref|NP_175486.2| uncharacterized protein [Arabidopsis thaliana] gi|26450119|dbj|BAC42179.1| unknown protein [Arabidopsis thaliana] gi|28973209|gb|AAO63929.1| unknown protein [Arabidopsis thaliana] gi|332194461|gb|AEE32582.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224114461|ref|XP_002316767.1| predicted protein [Populus trichocarpa] gi|118488933|gb|ABK96275.1| unknown [Populus trichocarpa x Populus deltoides] gi|222859832|gb|EEE97379.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356567344|ref|XP_003551881.1| PREDICTED: uncharacterized protein LOC100790889 [Glycine max] Back     alignment and taxonomy information
>gi|357459655|ref|XP_003600108.1| HAUS augmin-like complex subunit [Medicago truncatula] gi|355489156|gb|AES70359.1| HAUS augmin-like complex subunit [Medicago truncatula] Back     alignment and taxonomy information
>gi|363808200|ref|NP_001242486.1| uncharacterized protein LOC100786070 [Glycine max] gi|255640838|gb|ACU20702.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|217071844|gb|ACJ84282.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query431
TAIR|locus:2015857423 AUG4 "augmin subunit 4" [Arabi 0.974 0.992 0.669 1e-139
UNIPROTKB|E1BKA4363 HAUS4 "Uncharacterized protein 0.296 0.352 0.289 4.7e-09
UNIPROTKB|Q9H6D7363 HAUS4 "HAUS augmin-like comple 0.292 0.347 0.284 1.4e-08
UNIPROTKB|G3V2T6140 G3V2T6 "Uncharacterized protei 0.292 0.9 0.284 1.4e-08
UNIPROTKB|F1LS46345 Haus4 "Protein Haus4" [Rattus 0.480 0.6 0.227 2.4e-08
RGD|1305288363 Haus4 "HAUS augmin-like comple 0.480 0.570 0.227 3e-08
UNIPROTKB|E2R8L1870 AJUBA "Uncharacterized protein 0.296 0.147 0.281 6.2e-07
MGI|MGI:1261794363 Haus4 "HAUS augmin-like comple 0.482 0.573 0.221 1.3e-06
UNIPROTKB|I3LK49314 HAUS4 "Uncharacterized protein 0.278 0.382 0.266 2.5e-05
TAIR|locus:2015857 AUG4 "augmin subunit 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
 Identities = 283/423 (66%), Positives = 305/423 (72%)

Query:     1 MVKGLQGGDQNLPADVSQVIDLLERHCLAPDGSLVSKSAHYDLQLAREEMSRERLRYLEA 60
             MVK LQG  QNLPADV+Q+ID LERHCLAPDGSLV+KS + DLQLAREEMSRERLRYLEA
Sbjct:     1 MVKALQGAAQNLPADVNQLIDQLERHCLAPDGSLVTKSVYSDLQLAREEMSRERLRYLEA 60

Query:    61 MAIYCEAIAMVEGYQQAVSVANLGGIRDVXXXXXXXXXXXXPQVYETLEHRLVVAEAAQR 120
             MAIYCEA+AMVE YQQA+SVAN GGIRDV            PQVYETLEHRLVVAEAAQ+
Sbjct:    61 MAIYCEAVAMVEEYQQAISVANHGGIRDVQGLYPQLGLKNSPQVYETLEHRLVVAEAAQK 120

Query:   121 LRLPLISKDGEILEDEIEKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGNNA 180
             LRLPLIS  GEI E+EIEKW                                   GG + 
Sbjct:   121 LRLPLISDGGEIHEEEIEKWSILSRSSLDSASTSFTISSTSNSVNYANSSANSVAGGIS- 179

Query:   181 LIAGDAEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDK 240
             L A D +  VGGVPNRFLGITPAYL   QLQ T +SMD A+YQ+ ++REIE RLK KCDK
Sbjct:   180 LSAVDTDV-VGGVPNRFLGITPAYLSYVQLQNT-ISMDMADYQMFLAREIEGRLKEKCDK 237

Query:   241 LXXXXXXXXXXXXGNHMSTARLPERVKMXXXXXXXXXXXXXXXXXXXXXKFAEYYNVLEQ 300
             L            GN  S+ARLPERVK                      KFAEYYNVLEQ
Sbjct:   238 LADAIVDDTDSSTGNRNSSARLPERVKFIIEEIERDEAALREDLYSADRKFAEYYNVLEQ 297

Query:   301 ILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALH 360
             ILGVLIKLVKDLKL+HQHKY+E+QKTWLCKRCETM+AKLRVLE+VLLL TYT +SI ALH
Sbjct:   298 ILGVLIKLVKDLKLEHQHKYNEMQKTWLCKRCETMNAKLRVLENVLLLETYTPDSISALH 357

Query:   361 KIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEM 420
              IR YLVEATEEAS AYNKAVTRLREYQGVDP FD IARQYHDIVKKLENMQWTIHQVEM
Sbjct:   358 NIRNYLVEATEEASAAYNKAVTRLREYQGVDPHFDTIARQYHDIVKKLENMQWTIHQVEM 417

Query:   421 DLK 423
             DLK
Sbjct:   418 DLK 420




GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005515 "protein binding" evidence=IPI
GO:0005876 "spindle microtubule" evidence=IDA
GO:0051011 "microtubule minus-end binding" evidence=IDA
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
UNIPROTKB|E1BKA4 HAUS4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H6D7 HAUS4 "HAUS augmin-like complex subunit 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G3V2T6 G3V2T6 "Uncharacterized protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1LS46 Haus4 "Protein Haus4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1305288 Haus4 "HAUS augmin-like complex, subunit 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8L1 AJUBA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1261794 Haus4 "HAUS augmin-like complex, subunit 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LK49 HAUS4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 431
PF14735238 HAUS4: HAUS augmin-like complex subunit 4 100.0
PRK04863 1486 mukB cell division protein MukB; Provisional 92.97
>PF14735 HAUS4: HAUS augmin-like complex subunit 4 Back     alignment and domain information
Probab=100.00  E-value=4.5e-75  Score=555.26  Aligned_cols=232  Identities=41%  Similarity=0.622  Sum_probs=224.0

Q ss_pred             CCCCCCCCCccccccChhhhhhhhhhcCCCcccHHHHHHHhHHHHHHHHHHHHHHHhhccCCC--CccccccccccCCch
Q 014093          186 AEAGVGGVPNRFLGITPAYLWQTQLQQTPLSMDTAEYQISVSREIEARLKAKCDKLADAFIDD--IDSASGNHMSTARLP  263 (431)
Q Consensus       186 ~~p~v~~~~~~~LGl~~~~L~q~~l~~~p~~~d~~~~q~~L~~EIE~rLkkKC~~Llsy~~pd--~DSe~L~~aK~~~Lp  263 (431)
                      +.||+||++++||||+|+||    ++.+|+.+|+.|||++|+||||+||++||++|+|||+|+  .+|+++++||+++||
T Consensus         5 ~~~~~~~~~~~llGl~~~~L----~~~~~~~~~~~~~q~~L~~eiE~~Lk~KC~~Lls~~~p~~~~~s~~l~~ak~~~L~   80 (238)
T PF14735_consen    5 VDPGVGGDQPRLLGLTPADL----LQLMPDKKDVQRMQQRLPREIEERLKKKCFSLLSYHQPDSESSSEGLKAAKSWQLP   80 (238)
T ss_pred             CCCCCCCCCCCccCCCHHHH----HhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccchhhHhHHHhHH
Confidence            78999999999999999999    566777789999999999999999999999999999984  447779999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHHhHh
Q 014093          264 ERVKMIIEEIEREEAALREDLYAADRKFAEYYNVLEQILGVLIKLVKDLKLQHQHKYDELQKTWLCKRCETMSAKLRVLE  343 (431)
Q Consensus       264 e~Lk~~ieEkqr~es~lrE~~~ll~rQ~~~Y~qvLlqCL~lLq~LI~khRLk~Q~d~D~i~~~yLe~KCeaM~lKLRvle  343 (431)
                      ++|+..+.+.+++++.++|+++++++||++|++||++||++|++||++|||++|+++|+++++||++||++|++|||+++
T Consensus        81 ~~l~~ek~~~~~~k~~~~e~~~~l~~q~~~y~~vL~~cl~~L~~li~~~rl~~q~~~d~~~~~~L~~kceam~lKLr~~~  160 (238)
T PF14735_consen   81 ELLREEKQRLEKEKAQLRELLVLLERQFATYYQVLLQCLQLLQKLIEKHRLGTQAELDKIKAEYLEAKCEAMILKLRVLE  160 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998888888889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCChhHHHHHHHHHHHHHHHhhhhhhHHHHHhh
Q 014093          344 HVLLLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMD  421 (431)
Q Consensus       344 ~~LL~dTYTpEkV~ALrkIR~~Le~A~~e~eq~~~~s~~~L~~Ye~LG~eFd~LvrEY~~L~q~IenkrWaL~E~~~~  421 (431)
                      ++||++|||||+|+||++||++|+++++++++++++++++|++||++|++|++||+||++|+++|+||||||+||+||
T Consensus       161 ~~iL~~TYTpe~v~Al~~Ir~~L~~~~~~~e~~~~~a~~~L~~Ye~lg~~F~~ivreY~~l~~~ie~k~Wal~e~~~~  238 (238)
T PF14735_consen  161 LEILSDTYTPETVPALRKIRDHLEEAIEELEQELQKARQRLESYEGLGPEFEEIVREYTDLQQEIENKRWALEEFSKS  238 (238)
T ss_pred             HHHHHccCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999986



>PRK04863 mukB cell division protein MukB; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query431
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 64.5 bits (156), Expect = 4e-11
 Identities = 60/421 (14%), Positives = 131/421 (31%), Gaps = 110/421 (26%)

Query: 78  VSVANLGGIRDV----QGLSSQLGLKSSPQVYETLEHRLVVAEAAQRLRLPLISKDGE-- 131
           +++ N      V    Q L  Q+    + +   +   +L +      LR  L SK  E  
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 132 --ILEDEIEKWSTMSRSSLDS------TSTSATISSSSNSMNYTNTSMNSISGGNNALIA 183
             +L   +   +  + ++ +       T+    ++   ++   T+ S++  S     L  
Sbjct: 247 LLVL-LNV--QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT---LTP 300

Query: 184 GDAEAGVGGVPNRFLGITPAYLWQTQLQQTPL--SMDTAEYQISVSREIEARLKAKCDKL 241
            + +     +  ++L   P  L +  L   P   S+     +  ++   +      CDKL
Sbjct: 301 DEVK----SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKL 355

Query: 242 A---DAFIDDIDSASGNHM--STARLPERVK------------MIIEEIER--------- 275
               ++ ++ ++ A    M    +  P                +I  ++           
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415

Query: 276 ------------------EEAALREDLYAADRKFAEYYNVLEQI-LGVLIKLVKD----- 311
                             E     E+ YA  R   ++YN+ +      LI    D     
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 312 ------LKLQHQHKYDELQKTWLCKRCETMSAKLRVLEHVLLLGTYTQESIPALHKIRKY 365
                   ++H  +    +  +L  R   +  K+R   H       +   +  L +++ Y
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFR--FLEQKIR---HDSTAWNASGSILNTLQQLKFY 530

Query: 366 LVEATEEASVAYNKAVTRLREY-QGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDLKR 424
                              + Y    DP+++ +     D + K+E  +  I     DL R
Sbjct: 531 -------------------KPYICDNDPKYERLVNAILDFLPKIE--ENLICSKYTDLLR 569

Query: 425 L 425
           +
Sbjct: 570 I 570


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00