Citrus Sinensis ID: 014392
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 425 | ||||||
| 224092328 | 479 | predicted protein [Populus trichocarpa] | 0.997 | 0.885 | 0.694 | 1e-177 | |
| 255551046 | 476 | conserved hypothetical protein [Ricinus | 0.983 | 0.878 | 0.692 | 1e-169 | |
| 297821995 | 479 | hypothetical protein ARALYDRAFT_481426 [ | 0.992 | 0.881 | 0.661 | 1e-163 | |
| 225430021 | 478 | PREDICTED: uncharacterized protein LOC10 | 0.988 | 0.878 | 0.677 | 1e-163 | |
| 30682879 | 476 | Sulfite exporter TauE/SafE family protei | 0.992 | 0.886 | 0.648 | 1e-160 | |
| 224143013 | 448 | predicted protein [Populus trichocarpa] | 0.927 | 0.879 | 0.691 | 1e-159 | |
| 356518316 | 477 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.878 | 0.634 | 1e-155 | |
| 356510003 | 472 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.879 | 0.640 | 1e-155 | |
| 358344801 | 470 | hypothetical protein MTR_042s0018 [Medic | 0.955 | 0.863 | 0.629 | 1e-151 | |
| 225442593 | 481 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.881 | 0.635 | 1e-150 |
| >gi|224092328|ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/478 (69%), Positives = 373/478 (78%), Gaps = 54/478 (11%)
Query: 1 MADLGAKWKILRSVMMIFLNFALAFVCVKAERGLKIE--TLRFNGTERQDSNYLLKAVNF 58
MA+ G KW+ LRSV+M+ LNF LAFV V AERGLK E + R N T S+Y+LKAVNF
Sbjct: 1 MAEFGGKWRGLRSVLMVLLNFLLAFVFVSAERGLKHEATSTRMNETGDSVSSYVLKAVNF 60
Query: 59 LWQPEGSGYHHVW---------------------------------------------PV 73
LWQP+ GY HVW P
Sbjct: 61 LWQPDHKGYQHVWPEMKFGWQIVLGSIIGFFGAAFGSVGGVGGGGIFVPMLSLVIGFDPK 120
Query: 74 S-------MIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIF 126
S MIMGAA+STVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNV+F
Sbjct: 121 SATAISKCMIMGAAISTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVVF 180
Query: 127 ADWMVTVLLIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSG 186
ADWMVTVLLI+LF+GTSTKAFLKGVETWK+ETI+K+EAA+ L S+GA AGEVEYK LP G
Sbjct: 181 ADWMVTVLLIILFLGTSTKAFLKGVETWKKETIMKREAAKRLESDGASAGEVEYKPLPGG 240
Query: 187 PRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQI 246
P + PQK E EV+ILEN+ WKELGLLVFVWVAFL LQI K T++CS YWVL+LLQI
Sbjct: 241 PSNSPQKADKEEEVSILENVYWKELGLLVFVWVAFLVLQITKEGTSTCSTTYWVLNLLQI 300
Query: 247 PVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFI 306
PVS+ VS+YEA+SLYKG R+IASKG +G +F + QLV YC FG+LAG+VGGLLGLGGGFI
Sbjct: 301 PVSVGVSMYEAVSLYKGHRIIASKGTEGTNFTILQLVIYCLFGILAGVVGGLLGLGGGFI 360
Query: 307 MGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQ 366
MGPLFLELG+PPQVSSATATFAMTFSSSMSVVEYYLLKRFPV YA+YFVAVAT AAF+GQ
Sbjct: 361 MGPLFLELGIPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVSYAVYFVAVATFAAFIGQ 420
Query: 367 HVVRKLIILLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKYD 424
H+VR+LII+ GRASLIIFILA IF+SAISLGGVG++NMIGK HRHEYMGFENLCKYD
Sbjct: 421 HIVRRLIIVFGRASLIIFILASTIFISAISLGGVGVANMIGKIHRHEYMGFENLCKYD 478
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551046|ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297821995|ref|XP_002878880.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] gi|297324719|gb|EFH55139.1| hypothetical protein ARALYDRAFT_481426 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|225430021|ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|30682879|ref|NP_850068.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|22531098|gb|AAM97053.1| unknown protein [Arabidopsis thaliana] gi|25083770|gb|AAN72117.1| unknown protein [Arabidopsis thaliana] gi|26450521|dbj|BAC42374.1| unknown protein [Arabidopsis thaliana] gi|28951043|gb|AAO63445.1| At2g25737 [Arabidopsis thaliana] gi|330252652|gb|AEC07746.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224143013|ref|XP_002324818.1| predicted protein [Populus trichocarpa] gi|222866252|gb|EEF03383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356518316|ref|XP_003527825.1| PREDICTED: uncharacterized protein LOC100810784 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356510003|ref|XP_003523730.1| PREDICTED: uncharacterized protein LOC100809318 [Glycine max] | Back alignment and taxonomy information |
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| >gi|358344801|ref|XP_003636475.1| hypothetical protein MTR_042s0018 [Medicago truncatula] gi|355502410|gb|AES83613.1| hypothetical protein MTR_042s0018 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|225442593|ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266912 [Vitis vinifera] gi|297743252|emb|CBI36119.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 425 | ||||||
| TAIR|locus:504956017 | 476 | AT2G25737 [Arabidopsis thalian | 0.818 | 0.731 | 0.733 | 5.3e-147 | |
| TAIR|locus:2040605 | 459 | AT2G36630 [Arabidopsis thalian | 0.449 | 0.416 | 0.460 | 2e-83 | |
| TAIR|locus:2200061 | 367 | AT1G11540 "AT1G11540" [Arabido | 0.788 | 0.912 | 0.299 | 1.9e-35 | |
| TAIR|locus:2127343 | 449 | AT4G21250 "AT4G21250" [Arabido | 0.783 | 0.741 | 0.281 | 8.3e-35 | |
| TAIR|locus:2195773 | 458 | AT1G61740 [Arabidopsis thalian | 0.404 | 0.375 | 0.280 | 3.5e-30 | |
| TAIR|locus:2127348 | 393 | AT4G21260 "AT4G21260" [Arabido | 0.225 | 0.244 | 0.343 | 1.1e-23 | |
| DICTYBASE|DDB_G0269644 | 549 | DDB_G0269644 [Dictyostelium di | 0.811 | 0.628 | 0.230 | 2.1e-20 |
| TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1285 (457.4 bits), Expect = 5.3e-147, Sum P(2) = 5.3e-147
Identities = 256/349 (73%), Positives = 285/349 (81%)
Query: 75 MIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVL 134
MIMGA+VSTVYYNL+LRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIF DW+VTVL
Sbjct: 127 MIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVL 186
Query: 135 LIVLFIGTSTKAFLKGVETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKD 194
LIVLF+GTSTKAFLKG ETW +ETI KKEAA+ L SNG EVEY LP+ P + P
Sbjct: 187 LIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLESNGVSGTEVEYVPLPAAPSTNPGNK 246
Query: 195 AMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNHTASCSIVYWVLDLLQIPVSLVVSL 254
E EV+I+EN+ WKELGLLVFVW+ FL LQI+K + A+CS+ YWV++LLQIPV++ VS
Sbjct: 247 KKE-EVSIIENVYWKELGLLVFVWIVFLALQISKQNLANCSVAYWVINLLQIPVAVGVSG 305
Query: 255 YEAISLYKGRRVIASKGDDGKSFRVFQLVSYCXXXXXXXXXXXXXXXXXXXXMGPLFLEL 314
YEA++LY+GRR+IASKG +F V QLV YC MGPLFLEL
Sbjct: 306 YEAVALYQGRRIIASKGQGDSNFTVGQLVMYCTFGIIAGIVGGLLGLGGGFIMGPLFLEL 365
Query: 315 GVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYFVAVATIAAFVGQHVVRKLII 374
GVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALY V VATIAA+VGQHVVR+LI
Sbjct: 366 GVPPQVSSATATFAMTFSSSMSVVEYYLLKRFPVPYALYLVGVATIAAWVGQHVVRRLIA 425
Query: 375 LLGRASLIIFILAFMIFVSAISLGGVGISNMIGKFHRHEYMGFENLCKY 423
+GRASLIIFILA MIF+SAISLGGVGI NMIGK RHEYMGFENLCKY
Sbjct: 426 AIGRASLIIFILASMIFISAISLGGVGIVNMIGKIQRHEYMGFENLCKY 474
|
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| TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 425 | |||
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 2e-10 | |
| pfam01925 | 236 | pfam01925, TauE, Sulfite exporter TauE/SafE | 6e-09 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 2e-08 | |
| COG0730 | 258 | COG0730, COG0730, Predicted permeases [General fun | 5e-07 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 2e-10
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 285 YCAFGVLAGIVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVEYYLLK 344
G+LAG + GL G GGG I PL L L PP V+ T+ A+ +S + +
Sbjct: 1 LLLAGLLAGFLAGLAGFGGGLIAVPLLLLLLGPPHVAVGTSLLAVIATSLSGALAHRRRG 60
Query: 345 RFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFILAFMIFV 392
L + + A +G ++ L + + + +L + +
Sbjct: 61 NVDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLM 108
|
This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236 |
| >gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE | Back alignment and domain information |
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| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 425 | |||
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.77 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.77 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.7 | |
| PRK10621 | 266 | hypothetical protein; Provisional | 99.48 | |
| COG0730 | 258 | Predicted permeases [General function prediction o | 99.44 | |
| PF01925 | 240 | TauE: Sulfite exporter TauE/SafE; InterPro: IPR002 | 99.2 | |
| KOG2881 | 294 | consensus Predicted membrane protein [Function unk | 80.5 | |
| PRK11469 | 188 | hypothetical protein; Provisional | 80.42 |
| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.6e-17 Score=155.97 Aligned_cols=194 Identities=22% Similarity=0.330 Sum_probs=159.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHHHHHHhhh
Q 014392 71 WPVSMIMGAAVSTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFADWMVTVLLIVLFIGTSTKAFLKG 150 (425)
Q Consensus 71 ~~~~~I~G~sl~~~~~n~~~rHP~~~~plIdy~lalll~P~~llG~~iGv~ln~~~P~~~l~il~~ill~~~s~k~~~kg 150 (425)
...+.++.+++.+.+.+.|++| +||+.++.+.+..++|+.+|+.+...+|+..+...+.+++++.+.+++++.
T Consensus 49 t~l~~~~~~~~~~~~~~~k~~~-------v~~~~~~~l~~~~~~G~~lG~~l~~~~~~~~l~~~~~~~ll~~~~~~~~~~ 121 (258)
T COG0730 49 TSLLAVLFTSLSSALAYLKRGN-------VDWKLALILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLALYMLLGP 121 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC-------ccHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3337777888888888888855 999999999999999999999999999999999999999999999988763
Q ss_pred hhhhhHHHHHHHHHHHhhcCCCCCCCcccccCCCCCCCCCCCCCCCchhhhhhhcchhHHHHHHHHHHHHHHHHHhhhcc
Q 014392 151 VETWKRETILKKEAARCLGSNGAGAGEVEYKSLPSGPRSGPQKDAMEPEVTILENINWKELGLLVFVWVAFLGLQIAKNH 230 (425)
Q Consensus 151 ~~~~kkE~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~l~~~i~k~~ 230 (425)
.+ .++|. +. ++. .++.
T Consensus 122 ~~-~~~~~----------------------~~--------------~~~------~~~~--------------------- 137 (258)
T COG0730 122 RL-AKAED----------------------RA--------------ARL------RPLL--------------------- 137 (258)
T ss_pred cc-ccccc----------------------cc--------------ccc------Ccch---------------------
Confidence 21 00000 00 000 0001
Q ss_pred cCccchHHHHHHHhhhHHHHHHHHHHHHHHHhcccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhhccccchhhHHHH
Q 014392 231 TASCSIVYWVLDLLQIPVSLVVSLYEAISLYKGRRVIASKGDDGKSFRVFQLVSYCAFGVLAGIVGGLLGLGGGFIMGPL 310 (425)
Q Consensus 231 ~~~Cs~~yw~l~~l~~pv~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~vsGl~GiGGG~i~vPl 310 (425)
.......|+++|+++|++|+|||...+|.
T Consensus 138 ---------------------------------------------------~~~~~~~g~~~G~~sG~~G~GgG~~~vp~ 166 (258)
T COG0730 138 ---------------------------------------------------FALALLIGFLAGFLSGLFGVGGGFGIVPA 166 (258)
T ss_pred ---------------------------------------------------hHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 01233568899999999999999999999
Q ss_pred H-HHcCCChhHHHHHHHHHHHHHhHHHHHHHHH-cCCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Q 014392 311 F-LELGVPPQVSSATATFAMTFSSSMSVVEYYL-LKRFPVPYALYFVAVATIAAFVGQHVVRKLIILLGRASLIIFIL 386 (425)
Q Consensus 311 L-l~~g~~~~~A~aTs~~~~~~~s~~~~~~~~~-~g~v~~~~~~~l~~~~~iGa~lGa~l~~~l~~~~lr~~~~v~ll 386 (425)
+ ...+.|.+.+++|+.+..++++..+...|.. .|++||..+..+.+++++|+++|++++++++++.+|+.+..+++
T Consensus 167 l~~~~~~~~~~~~~ts~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~~~~ 244 (258)
T COG0730 167 LLLLLLLPLKLAVATSLAIILNTASNGAALYLFALGAVDWPLALLLAVGSILGAYLGARLARRLSPKVLRRLFALVLL 244 (258)
T ss_pred HHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9 4678999999999999999999999999999 69999999889999999999999999999999999988876543
|
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| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
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| >PRK10621 hypothetical protein; Provisional | Back alignment and domain information |
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| >COG0730 Predicted permeases [General function prediction only] | Back alignment and domain information |
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| >PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised | Back alignment and domain information |
|---|
| >KOG2881 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >PRK11469 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00