Citrus Sinensis ID: 014542

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
Protein Sequence
METQSSPKALTKLKSSCRSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISKLEQATRNRSNLGACVC
Secondary Structure (PSIPRED)
ccccccHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccccccccEEEcccccccccEEEEccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccHHHHHHHHHcccccEEEEcccccccEEEccEEEEEcccccccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHccccEEEEccHHHHHcccccccccEEEEEEEccccccccccccHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHcccccccHHHHHHHHHHcccEEEccccccccccccccccEEEEEEccccccccccEEEEcccHcccccEEEEEccccccccHcHHHHccHHHcccccEEccccEEEEccccccccHHHHHHHHHHHHHHHHHcccccccHEEEEEHHHHHHHHHHHHHHHHHHHcccccEEEccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEccccEEccHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHcccEEEEcccccccEEEEcccccEEEEEccccHHHHcccccEEEEHHHHHccccccccccccccccccccccccccHHEEEccccEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
metqsspkaLTKLKSSCRSTELVICCtsldsvtflplkdLRFVETAMLEHTWFISSmndtheeneaehlyfpseaskGRLLcmkgrnkedgtknsyafawpeslpesaTLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSwsiknrclrpnrwllfHWGELRDQMGSWLYHLMQanfgeveivgfeggangpycFEKAAVMRhnegsmgkarKLQVFDLLRckargfcginpagkgqefnekgqpiIRLTLLMRrgsrsfknaTAVTEIFAEECAMVDgcvlkveqsedlsfcdqvkvmtgtdvvasphgaqltnmlfmdrnssvmeffpkGWLELagvgqyahhwmadqsgmrhrgawwdplvqeecptphndlecfkfdkngqvghneTYFAEWARSILNQVRISKLEQAtrnrsnlgacvc
Flexible Loop (DISEMBL)
metqsspkaltklksscrsTELVICCTsldsvtflpLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGinpagkgqefnekgqPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISkleqatrnrsnlgacvc
Low Complexity Region (SEG)
METQSSPKALTKLKSSCRSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANfgeveivgfeggANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISKLEQATRNRSNLGACVC
Disordered region (IsUnstruct)
****************CRSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSM***********************LC************SYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISK****************
Disordered Region (DISOPRED)
*******************TELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGIN*****************LTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQ*****************ACVC
Disordered Region (DISEMBL)
*****************RSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISKLEQATRNRSNLGACVC
Disordered Region (DISPRO)
******PK****LKSSCRSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISKLEQA************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METQSSPKALTKLKSSCRSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILNQVRISKLEQATRNRSNLGACVC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	423	2.2.26 [Sep-21-2011]
Q5NDE7	578	Glycosyltransferase-like	N/A	no	0.189	0.138	0.321	0.0005
Q5NDE6	576	Glycosyltransferase-like	yes	no	0.189	0.138	0.321	0.0006

>sp|Q5NDE7|GTDC2_XENLA Glycosyltransferase-like domain-containing protein 2 OS=Xenopus laevis GN=gtdc2 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 248 LTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASP 307
           + L  R  +R   N   +    A+E  M    V      ED SF D V++++   ++ S 
Sbjct: 287 IVLFSRSMNRLIVNEAELLLALAQEFQMKTITV----SLEDHSFSDIVRLLSNATMLVSM 342

Query: 308 HGAQLTNMLFMDRNSSVMEFFPKG 331
           HGAQL   LF+ + + V+E FP G
Sbjct: 343 HGAQLVTSLFLPKGAVVVELFPYG 366

Xenopus laevis (taxid: 8355)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp|Q5NDE6|GTDC2_XENTR Glycosyltransferase-like domain-containing protein 2 OS=Xenopus tropicalis GN=gtdc2 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 248 LTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASP 307
           + L  R  +R   N   +    A+E  M    V      ED SF D V++++   ++ S 
Sbjct: 287 IVLFSRSMNRLIVNEAELLLALAQEFQMKTITV----SLEDHSFADIVRLISNATMLVSM 342

Query: 308 HGAQLTNMLFMDRNSSVMEFFPKG 331
           HGAQL   LF+ + + V+E FP G
Sbjct: 343 HGAQLITSLFLPKGAIVVELFPYG 366

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
224063287	383	predicted protein [Populus trichocarpa]	0.891	0.984	0.799	0.0
255545882	479	conserved hypothetical protein [Ricinus	0.929	0.820	0.738	1e-178
224141189	462	predicted protein [Populus trichocarpa]	0.926	0.848	0.585	1e-135
255563228	487	conserved hypothetical protein [Ricinus	0.912	0.792	0.566	1e-130
147852146	489	hypothetical protein VITISV_038130 [Viti	0.910	0.787	0.552	1e-129
225464093	491	PREDICTED: uncharacterized protein LOC10	0.910	0.784	0.552	1e-129
225448184	476	PREDICTED: uncharacterized protein LOC10	0.912	0.810	0.535	1e-128
224095861	439	predicted protein [Populus trichocarpa]	0.891	0.858	0.549	1e-124
297798570	465	hypothetical protein ARALYDRAFT_491325 [	0.912	0.830	0.526	1e-121
15235000	466	uncharacterized protein [Arabidopsis tha	0.895	0.813	0.535	1e-120

>gi|224063287|ref|XP_002301078.1| predicted protein [Populus trichocarpa] gi|222842804|gb|EEE80351.1| predicted protein [Populus trichocarpa]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/379 (79%), Positives = 338/379 (89%), Gaps = 2/379 (0%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           +SVTFLPLKDLRF ETAM  +TWF+SS+NDTHE NEAE+LYFPS+ SKGRLLC+KGR+  
Sbjct: 7   ESVTFLPLKDLRFAETAMEGNTWFMSSLNDTHEANEAEYLYFPSQMSKGRLLCIKGRHAT 66

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRP 149
           DGTKNSYA  WPE+LP+SATL+KGLTFVSDT+YDY NLWHGLT M PFV WS+KN+CL P
Sbjct: 67  DGTKNSYALVWPEALPDSATLMKGLTFVSDTFYDYGNLWHGLTGMAPFVGWSMKNKCLNP 126

Query: 150 NRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGK 209
            RW+LFHWGELR +MGSWL HLMQANFG+V+I GF  G +GPYCFEKA VMRHNEGSMGK
Sbjct: 127 TRWVLFHWGELRSKMGSWLQHLMQANFGDVKIEGF--GGDGPYCFEKAVVMRHNEGSMGK 184

Query: 210 ARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIF 269
            RKLQVFDLLRC AR FCGI+P GKGQE NE+G+PIIRLTLLMR GSRSFKNA+AVT+IF
Sbjct: 185 ERKLQVFDLLRCNARRFCGISPEGKGQETNERGEPIIRLTLLMRTGSRSFKNASAVTDIF 244

Query: 270 AEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFP 329
           A ECA V+GC  KV QSE+LSFCDQV+VMT TDVVASPHGAQLTNMLFMDRNSSVMEFFP
Sbjct: 245 ARECAKVEGCTFKVAQSENLSFCDQVRVMTYTDVVASPHGAQLTNMLFMDRNSSVMEFFP 304

Query: 330 KGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNE 389
           KGWLELAGVGQYAHHWMADQSGM HRGAWWDPLV++ECP P  DL+CF F KNG+VGHNE
Sbjct: 305 KGWLELAGVGQYAHHWMADQSGMNHRGAWWDPLVKKECPFPQQDLDCFNFYKNGKVGHNE 364

Query: 390 TYFAEWARSILNQVRISKL 408
           T+FAEWAR +L+QVRISK+
Sbjct: 365 THFAEWARIVLDQVRISKM 383

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545882|ref|XP_002514001.1| conserved hypothetical protein [Ricinus communis] gi|223547087|gb|EEF48584.1| conserved hypothetical protein [Ricinus communis]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 294/398 (73%), Positives = 336/398 (84%), Gaps = 5/398 (1%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           DSVTFLPLKDLRF +TAM  +TWF+SS+NDT EENEAE+LYFPSE SKGRLLC+KG +  
Sbjct: 83  DSVTFLPLKDLRFAKTAMESNTWFMSSLNDTREENEAEYLYFPSEMSKGRLLCIKGNDGT 142

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRP 149
           DGTKNSYA AWPE+LP SA L+ GLTFVSDTYYDY NLWHGL A+ PFV WSIKN CL+P
Sbjct: 143 DGTKNSYALAWPEALPHSAKLMDGLTFVSDTYYDYVNLWHGLCAVAPFVGWSIKNECLKP 202

Query: 150 NRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGK 209
            RW+LFHWGELR +MG+WL +LM  NFGEV++   E GA  PYCFEKA VMRHNEG MGK
Sbjct: 203 TRWVLFHWGELRSKMGAWLENLMGTNFGEVKVERLEEGAQ-PYCFEKAVVMRHNEGGMGK 261

Query: 210 ARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIF 269
            +KLQVFDLLRC AR FCGI+PAGK +E NE+G+PIIRLTLLMRRGSRSFKNATAV  +F
Sbjct: 262 EKKLQVFDLLRCNARRFCGIDPAGKRKEVNERGEPIIRLTLLMRRGSRSFKNATAVIGVF 321

Query: 270 AEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFP 329
           A ECAMVDGC LKV QSEDLSFCDQV+V+T TD+VASPHGAQLTNMLFMDR SSVMEFFP
Sbjct: 322 ARECAMVDGCTLKVVQSEDLSFCDQVRVLTYTDIVASPHGAQLTNMLFMDRKSSVMEFFP 381

Query: 330 KGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNE 389
           KGWLELAG+GQYAHHWMADQSGM H+G WW+PL  +ECP+P +DLECF F K+G+VGHNE
Sbjct: 382 KGWLELAGIGQYAHHWMADQSGMIHQGTWWEPLSVKECPSPEHDLECFNFYKDGKVGHNE 441

Query: 390 TYFAEWARSILNQVRISKLE--QATRNRSNL--GACVC 423
           T+FA W  ++L+QVR  KLE  +++ N+S L   AC C
Sbjct: 442 THFAAWTTTVLDQVRAKKLEINKSSFNKSQLYSTACAC 479

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141189|ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|222866959|gb|EEF04090.1| predicted protein [Populus trichocarpa]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/396 (58%), Positives = 293/396 (73%), Gaps = 4/396 (1%)

Query: 31  SVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKED 90
           SVTFLPLKDLR+ + A   HTWF+SS  DT EE   ++  FPSE+SK RLLC+KG+   D
Sbjct: 67  SVTFLPLKDLRYADKARQGHTWFMSSTYDTREEGGVQYQQFPSESSKRRLLCLKGKETHD 126

Query: 91  GTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPN 150
           G+ NSYA AWPE+LP +ATLLKGLTFVS  +YDY N+WHGL+AMVPFV+W I+N C  P+
Sbjct: 127 GSWNSYALAWPEALPFNATLLKGLTFVSYNHYDYDNIWHGLSAMVPFVAWHIRNGCESPS 186

Query: 151 RWLLFHWGELRDQMGSWLYHLMQANFGEVEIV-GFEGGANG-PYCFEKAAVMRHNEGSMG 208
           RW+L+HWGELR +MG WL  L  A FG       FEG  +G P CFEKA VMRHNEG M 
Sbjct: 187 RWILYHWGELRFEMGPWLRTLTGATFGGAPYTESFEGVNDGQPLCFEKAVVMRHNEGGMS 246

Query: 209 KARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEI 268
           + R+ + +DL+RCKAR +C ++  G+  E N++G P+I +TL MR GSRSF N +AV  I
Sbjct: 247 RDRRTETYDLMRCKARMYCNVSLEGRIPEVNKQGLPVIGMTLFMRTGSRSFTNESAVIGI 306

Query: 269 FAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFF 328
           F +ECA VDGC L V  S +L+FC+QVK+M+ TD++ S HGAQLTNM  MD+NSSVMEFF
Sbjct: 307 FEKECAKVDGCRLMVAYSNNLTFCEQVKMMSLTDILVSTHGAQLTNMFLMDKNSSVMEFF 366

Query: 329 PKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHN 388
           PKGWL++AGVGQY +HW+A  SGMRH+GAW D L  +ECP   +D  C    KNG+VG N
Sbjct: 367 PKGWLKVAGVGQYVYHWIASWSGMRHQGAWRD-LNGDECPYAEDDRRCMSIYKNGKVGFN 425

Query: 389 ETYFAEWARSILNQVRISKLEQ-ATRNRSNLGACVC 423
           ETYF+EWAR +LN+V+I KLE+ A++  ++  AC C
Sbjct: 426 ETYFSEWARDVLNEVKIRKLEEAASKTIASTSACSC 461

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563228|ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis] gi|223538093|gb|EEF39704.1| conserved hypothetical protein [Ricinus communis]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/390 (56%), Positives = 287/390 (73%), Gaps = 4/390 (1%)

Query: 31  SVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKED 90
           +VTFLPLKD+R+ E A+  HTWF+SSM DTHEE E ++  FPSE+SKGRLLC+KG +  D
Sbjct: 94  AVTFLPLKDIRYQEKALQGHTWFMSSMYDTHEEGEVQYQQFPSESSKGRLLCLKGNDTHD 153

Query: 91  GTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPN 150
           G+ NSYA AWPE+LP +ATLLKGLTFVS  +YDY N+WHGL+A+VPFV+W   N    P+
Sbjct: 154 GSWNSYALAWPETLPLNATLLKGLTFVSYNHYDYNNIWHGLSAIVPFVAWHKGNGGELPS 213

Query: 151 RWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANG--PYCFEKAAVMRHNEGSMG 208
           RW+L+HWGELR  MG WL  L +A FG    +   G AN   P CFEKA VMRHNEG M 
Sbjct: 214 RWILYHWGELRFNMGLWLSTLTEATFGSPPNIEGFGWANNNEPICFEKAVVMRHNEGGMS 273

Query: 209 KARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEI 268
             R+++ +D +RCKAR +C ++  G G   +EKG P+I +TL MR G RSFKN +AV  I
Sbjct: 274 TDRRIETYDFMRCKARAYCNVSLEG-GNMVSEKGLPVIGMTLFMRTGPRSFKNESAVIRI 332

Query: 269 FAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFF 328
           F +ECA VDGC L V  S +L+FC+QVK+M+ TD++ SPHGAQLTNM  M++NSSVMEFF
Sbjct: 333 FEKECAKVDGCRLMVAYSNNLTFCEQVKLMSMTDILISPHGAQLTNMFLMNKNSSVMEFF 392

Query: 329 PKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHN 388
           PKGWL+LAGVGQ+ +HW+A  SGM+H+GAW DP   + CP P +D  C    K G++G N
Sbjct: 393 PKGWLKLAGVGQFVYHWIASWSGMKHQGAWRDP-DGDHCPYPDDDRRCMSIYKGGKIGFN 451

Query: 389 ETYFAEWARSILNQVRISKLEQATRNRSNL 418
           ET+F+EW R++LN+V++ K E+ +   ++L
Sbjct: 452 ETHFSEWGRNVLNEVKLRKAEEMSHKSNDL 481

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147852146|emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/400 (55%), Positives = 293/400 (73%), Gaps = 15/400 (3%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           D+VTFLPLKDLR+ +TA   HTWF+SSM+DT  E E ++  +PS AS+GRLLC+KGR+  
Sbjct: 98  DAVTFLPLKDLRYAQTAQQGHTWFMSSMHDTRVEGEVQYQQYPSAASRGRLLCIKGRDTH 157

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKN-RCLR 148
           DG  NSYA AW ++LP +AT+LKGLTFVS  +Y+Y N+WHGL+AM+PFV+W ++  +C  
Sbjct: 158 DGVWNSYALAWRDALPRNATVLKGLTFVSYNHYNYDNIWHGLSAMMPFVAWHLRQGQCAV 217

Query: 149 PNRWLLFHWGELRDQMGSWLYHLMQANFG-EVEIVGF-EGGANGPYCFEKAAVMRHNEGS 206
           P RW+L+HWGELR +MG W+  L+QA FG  V I  F + G  G  CFE+A VMRHNEG 
Sbjct: 218 PTRWVLYHWGELRMKMGPWVKSLIQATFGGSVNIEEFGDSGDEGVACFEEAVVMRHNEGG 277

Query: 207 MGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVT 266
           M + R+L+V+D++RCKAR +C +   G+G         +I LT+LMR G+RSF+N +AV 
Sbjct: 278 MSRERRLEVYDMMRCKARKYCNVRIEGRGL-------AVIGLTMLMRTGARSFRNESAVV 330

Query: 267 EIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVME 326
            IF  EC  V+GC L V  S +L+FC QVK+M+ TD++ SPHGAQLTNM  MDRNS+VME
Sbjct: 331 RIFQRECRKVEGCRLTVAYSNNLTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVME 390

Query: 327 FFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVG 386
           FFPKGWL+LAGVGQY +HW+A  SGM+H GAW DP   ++CP P +D  C    KNG++G
Sbjct: 391 FFPKGWLKLAGVGQYVYHWIASWSGMKHEGAWRDP-NGDDCPYPEDDRRCMSIYKNGRIG 449

Query: 387 HNETYFAEWARSILNQVRISKLEQATRNRSN---LGACVC 423
           +N+T+F EWAR+IL +V+  K+E+A  N++N   LG C C
Sbjct: 450 YNDTFFEEWARNILVEVKTRKMEEAL-NKNNAVVLGGCAC 488

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464093|ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/400 (55%), Positives = 293/400 (73%), Gaps = 15/400 (3%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           D+VTFLPLKDLR+ +TA   HTWF+SSM+DT  E E ++  +PS AS+GRLLC+KGR+  
Sbjct: 100 DAVTFLPLKDLRYAQTAQQGHTWFMSSMHDTRVEGEVQYQQYPSAASRGRLLCIKGRDTH 159

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKN-RCLR 148
           DG  NSYA AW ++LP +AT+LKGLTFVS  +Y+Y N+WHGL+AM+PFV+W ++  +C  
Sbjct: 160 DGVWNSYALAWRDALPRNATVLKGLTFVSYNHYNYDNIWHGLSAMMPFVAWHLRQGQCAV 219

Query: 149 PNRWLLFHWGELRDQMGSWLYHLMQANFG-EVEIVGF-EGGANGPYCFEKAAVMRHNEGS 206
           P RW+L+HWGELR +MG W+  L+QA FG  V I  F + G  G  CFE+A VMRHNEG 
Sbjct: 220 PTRWVLYHWGELRMKMGPWVKSLIQATFGGSVNIEEFGDSGDEGVACFEEAVVMRHNEGG 279

Query: 207 MGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVT 266
           M + R+L+V+D++RCKAR +C +   G+G         +I LT+LMR G+RSF+N +AV 
Sbjct: 280 MSRERRLEVYDMMRCKARKYCNVRIEGRGL-------AVIGLTMLMRTGARSFRNESAVV 332

Query: 267 EIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVME 326
            IF  EC  V+GC L V  S +L+FC QVK+M+ TD++ SPHGAQLTNM  MDRNS+VME
Sbjct: 333 RIFQRECRKVEGCRLTVAYSNNLTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVME 392

Query: 327 FFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVG 386
           FFPKGWL+LAGVGQY +HW+A  SGM+H GAW DP   ++CP P +D  C    KNG++G
Sbjct: 393 FFPKGWLKLAGVGQYVYHWIASWSGMKHEGAWRDP-NGDDCPYPEDDRRCMSIYKNGRIG 451

Query: 387 HNETYFAEWARSILNQVRISKLEQATRNRSN---LGACVC 423
           +N+T+F EWAR+IL +V+  K+E+A  N++N   LG C C
Sbjct: 452 YNDTFFEEWARNILVEVKTRKMEEAL-NKNNAVVLGGCAC 490

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448184|ref|XP_002264959.1| PREDICTED: uncharacterized protein LOC100245802 [Vitis vinifera]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 213/398 (53%), Positives = 288/398 (72%), Gaps = 12/398 (3%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           D+VTFLPLKDLR+ +TA   HTWF+SS+ DTH E E ++  +PS AS+GRLLC+KGR+  
Sbjct: 86  DAVTFLPLKDLRYAQTAHQGHTWFMSSLYDTHVEGEVQYQQYPSAASRGRLLCIKGRDTH 145

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKN-RCLR 148
           DG +NSYA AWP +LP +AT+L GLTFVS  +Y+Y N+WHGL+AMVPFV+W +++ +C  
Sbjct: 146 DGARNSYALAWPNALPRNATVLTGLTFVSYNHYNYDNIWHGLSAMVPFVAWHLRDGQCAV 205

Query: 149 PNRWLLFHWGELRDQMGSWLYHLMQANF-GEVEIVGFEGGANGPYCFEKAAVMRHNEGSM 207
           P RW+L+HWGELR +MG W+  LMQA F G V I  F    +G  CFE+A V RHNEG M
Sbjct: 206 PARWVLYHWGELRIKMGPWVKSLMQATFGGSVNIEEFGDSGDGVACFEEAVVTRHNEGGM 265

Query: 208 GKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTE 267
            + R+L+V++++RCKAR +C +   G+G         +I LT+LMR G+RSF+N +AV  
Sbjct: 266 SRERRLEVYNMMRCKAREYCNVRIEGRGLT-------VIGLTMLMRTGARSFRNESAVVG 318

Query: 268 IFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEF 327
           IF  EC  ++GC L V  +++L+FC QVK+M+ TD++ SPHGAQLTN   MD+NSSVMEF
Sbjct: 319 IFQRECGKIEGCRLTVAYADNLTFCQQVKLMSLTDILVSPHGAQLTNTFLMDKNSSVMEF 378

Query: 328 FPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGH 387
           FPKGWL+LAGVGQY +HW+A  SGM+H GAW DP   ++CP P +D  C    KNG++G+
Sbjct: 379 FPKGWLKLAGVGQYVYHWIASWSGMKHEGAWRDP-NGDDCPYPEDDHRCMPIYKNGRIGY 437

Query: 388 NETYFAEWARSILNQVRISKLEQATRNRSN--LGACVC 423
           N+T+F EWAR++L +V+  K+E+A    +   L  C C
Sbjct: 438 NDTFFEEWARNVLMKVKTRKMEEALNKNTTLVLSGCAC 475

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095861|ref|XP_002310496.1| predicted protein [Populus trichocarpa] gi|222853399|gb|EEE90946.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/393 (54%), Positives = 282/393 (71%), Gaps = 16/393 (4%)

Query: 31  SVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKED 90
           +VTFLPLKDLR+ +TA   HTWF+SSM+DT EE E ++  FPSE+SKGRLLC+KG+   D
Sbjct: 61  AVTFLPLKDLRYADTAPEGHTWFMSSMHDTREEGEVQYQQFPSESSKGRLLCLKGKETHD 120

Query: 91  GTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRPN 150
           G+ NSYA AWPE+LP +ATLLKGLTFVS  +Y+Y N+WHGL+AMVPFVSW  +N C  P+
Sbjct: 121 GSWNSYALAWPEALPINATLLKGLTFVSYNHYNYDNIWHGLSAMVPFVSWHRRNGCESPS 180

Query: 151 RWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGKA 210
           RW+L+HWGELR  M  WL  L++A FG             PY  +   V   N+  M + 
Sbjct: 181 RWILYHWGELRFNMSPWLKILIEATFG-----------GAPYIEKFEGV---NDRGMSRD 226

Query: 211 RKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIFA 270
             ++ +DL+RCKA+ +C ++  G+  E N++G P+I +TL MR G+RSFKN +AV  IF 
Sbjct: 227 TMIETYDLMRCKAKVYCNLSLEGRIAEVNKQGLPVIGMTLFMRTGTRSFKNESAVIGIFE 286

Query: 271 EECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPK 330
           +ECA +DGC L V  S +L+FC+QVK+M+ TD++AS HGAQLTN+  MD+NSSVMEFFPK
Sbjct: 287 KECAKIDGCRLMVAYSNNLTFCEQVKLMSLTDILASAHGAQLTNLFLMDKNSSVMEFFPK 346

Query: 331 GWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNET 390
           GWL+LAGVGQY  HW+A  SGMRH+GAW DP   +ECP   +D  C    K G++G NET
Sbjct: 347 GWLKLAGVGQYVFHWLAGWSGMRHQGAWRDP-NGDECPYGEDDRRCMTIYKTGKIGLNET 405

Query: 391 YFAEWARSILNQVRISKLEQATRNRSNLGACVC 423
           YF EWA+ +LN+V+I KLE A  N++N  A +C
Sbjct: 406 YFTEWAKKVLNEVKIKKLEVAA-NKTNASASIC 437

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798570|ref|XP_002867169.1| hypothetical protein ARALYDRAFT_491325 [Arabidopsis lyrata subsp. lyrata] gi|297313005|gb|EFH43428.1| hypothetical protein ARALYDRAFT_491325 [Arabidopsis lyrata subsp. lyrata]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/395 (52%), Positives = 273/395 (69%), Gaps = 9/395 (2%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           +SVTFLPLKD RF    +  HTWF+SS+ D   + EA++  FPS++SKGRLLC+KG ++ 
Sbjct: 78  ESVTFLPLKDYRFSNKPLEGHTWFMSSLYDNQTKGEAQYQEFPSDSSKGRLLCLKGVDEH 137

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRP 149
           DG+ N Y  AWPE+LP +A L +GLTFVS   YDY NLWHGLTA VPFV+WS++N+C +P
Sbjct: 138 DGSWNYYVLAWPEALPTNAILQEGLTFVSYNQYDYGNLWHGLTAAVPFVAWSLRNQCEKP 197

Query: 150 NRWLLFHWGELRDQMGSWLYHLMQANFGEVEIVGFEGGANGPYCFEKAAVMRHNEGSMGK 209
            +W+L+HWGELR  MG WL  ++ + +G+          + P CFEKA VMRHNEG M +
Sbjct: 198 QKWVLYHWGELRFGMGHWLSEIITSIYGQAPDFLQFVDQDKPVCFEKAVVMRHNEGGMSR 257

Query: 210 ARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIF 269
            R+++VFDL+RCKAR +C I+ +       E  +P I +TLL+R G+RSF+N + V ++F
Sbjct: 258 ERRIEVFDLIRCKARNYCNISSS-------ETSKPRIGMTLLLRTGARSFRNESVVIDVF 310

Query: 270 AEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFP 329
             EC  VDGC L V  S +L+FC+QV++M  TDV+ SPHGAQLTN+  MD+NSSVMEFFP
Sbjct: 311 KRECKRVDGCELNVSYSNNLTFCEQVELMKKTDVLVSPHGAQLTNLFLMDKNSSVMEFFP 370

Query: 330 KGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNE 389
           KGWL+LAGVGQ    W A+ SGMRH G+W DP V E C  P+ D  C    KN ++G+NE
Sbjct: 371 KGWLKLAGVGQLVFQWGANWSGMRHEGSWHDP-VGEICQFPYTDRRCMSIYKNAKIGYNE 429

Query: 390 TYFAEWARSILNQVRISKL-EQATRNRSNLGACVC 423
           TYF EWAR +L +  I ++ E A  N  N    VC
Sbjct: 430 TYFGEWARRVLRKFSIREMKELAECNHGNSSLDVC 464

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235000|ref|NP_195085.1| uncharacterized protein [Arabidopsis thaliana] gi|3549661|emb|CAA20572.1| hypothetical protein [Arabidopsis thaliana] gi|7270307|emb|CAB80076.1| hypothetical protein [Arabidopsis thaliana] gi|332660851|gb|AEE86251.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/390 (53%), Positives = 274/390 (70%), Gaps = 11/390 (2%)

Query: 30  DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
           +SVTFLPLKD RF    +  HTWF+SS+ D   + EA++  FPS++SKGRLLC+KG ++ 
Sbjct: 78  ESVTFLPLKDYRFSNKPLEGHTWFMSSLYDNQTKGEAQYQEFPSDSSKGRLLCLKGVDEH 137

Query: 90  DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRP 149
           DG+ NSYA AWPE+LP +A L  GLTFVS   YDY NLWHGLTA+VPF++WS++N+C +P
Sbjct: 138 DGSWNSYALAWPEALPTNAILQDGLTFVSYNQYDYGNLWHGLTAVVPFIAWSLRNQCEKP 197

Query: 150 NRWLLFHWGELRDQMGSWLYHLMQANFG-EVEIVGFEGGANGPYCFEKAAVMRHNEGSMG 208
            +W+L+HWGELR  MG WL  ++ A +G E + + F    + P CFEKA VMRHNEG M 
Sbjct: 198 QKWVLYHWGELRFGMGHWLSEIVTATYGQEPDFLRFVDD-DKPVCFEKAVVMRHNEGGMS 256

Query: 209 KARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEI 268
           + R+++ FDL+RCKAR +C I+ +          +P I +TLL+R G+RSF+N + V ++
Sbjct: 257 RERRMEAFDLIRCKARNYCNISSS-------VASKPRIGMTLLLRTGARSFRNESMVIDV 309

Query: 269 FAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFF 328
           F +EC  VDGC + V  S +LSFC+QV++M  TDV+ SPHGAQLTN+  MD+NSSVMEFF
Sbjct: 310 FKKECKRVDGCEISVSYSNNLSFCEQVELMKKTDVLVSPHGAQLTNLFLMDKNSSVMEFF 369

Query: 329 PKGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHN 388
           PKGWL+LAGVGQ    W A+ SGMRH G+W DP V E C  P  D  C    KN  +G+N
Sbjct: 370 PKGWLKLAGVGQLVFQWGANWSGMRHEGSWHDP-VGEICQFPDTDRRCMSIYKNAMIGYN 428

Query: 389 ETYFAEWARSILNQVRISKL-EQATRNRSN 417
           ETYF EWAR +L +  I ++ E A  N SN
Sbjct: 429 ETYFGEWARRVLGKFSIREMKELAECNHSN 458

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
TAIR|locus:2134233	466	AT4G33590 [Arabidopsis thalian	0.898	0.815	0.526	4.1e-113
TAIR|locus:2134248	470	AT4G33600 "AT4G33600" [Arabido	0.966	0.870	0.502	1.1e-112

TAIR|locus:2134233 AT4G33590 [Arabidopsis thaliana (taxid:3702)]

 Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
 Identities = 205/389 (52%), Positives = 269/389 (69%)

Query:    30 DSVTFLPLKDLRFVETAMLEHTWFISSMNDTHEENEAEHLYFPSEASKGRLLCMKGRNKE 89
             +SVTFLPLKD RF    +  HTWF+SS+ D   + EA++  FPS++SKGRLLC+KG ++ 
Sbjct:    78 ESVTFLPLKDYRFSNKPLEGHTWFMSSLYDNQTKGEAQYQEFPSDSSKGRLLCLKGVDEH 137

Query:    90 DGTKNSYAFAWPESLPESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSWSIKNRCLRP 149
             DG+ NSYA AWPE+LP +A L  GLTFVS   YDY NLWHGLTA+VPF++WS++N+C +P
Sbjct:   138 DGSWNSYALAWPEALPTNAILQDGLTFVSYNQYDYGNLWHGLTAVVPFIAWSLRNQCEKP 197

Query:   150 NRWLLFHWGELRDQMGSWLYHLMQANXXXXXXXXXXXXANGPYCFEKAAVMRHNEGSMGK 209
              +W+L+HWGELR  MG WL  ++ A              + P CFEKA VMRHNEG M +
Sbjct:   198 QKWVLYHWGELRFGMGHWLSEIVTATYGQEPDFLRFVDDDKPVCFEKAVVMRHNEGGMSR 257

Query:   210 ARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRRGSRSFKNATAVTEIF 269
              R+++ FDL+RCKAR +C I+ +          +P I +TLL+R G+RSF+N + V ++F
Sbjct:   258 ERRMEAFDLIRCKARNYCNISSS-------VASKPRIGMTLLLRTGARSFRNESMVIDVF 310

Query:   270 AEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFP 329
              +EC  VDGC + V  S +LSFC+QV++M  TDV+ SPHGAQLTN+  MD+NSSVMEFFP
Sbjct:   311 KKECKRVDGCEISVSYSNNLSFCEQVELMKKTDVLVSPHGAQLTNLFLMDKNSSVMEFFP 370

Query:   330 KGWLELAGVGQYAHHWMADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNE 389
             KGWL+LAGVGQ    W A+ SGMRH G+W DP V E C  P  D  C    KN  +G+NE
Sbjct:   371 KGWLKLAGVGQLVFQWGANWSGMRHEGSWHDP-VGEICQFPDTDRRCMSIYKNAMIGYNE 429

Query:   390 TYFAEWARSILNQVRISKLEQ-ATRNRSN 417
             TYF EWAR +L +  I ++++ A  N SN
Sbjct:   430 TYFGEWARRVLGKFSIREMKELAECNHSN 458

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2134248 AT4G33600 "AT4G33600" [Arabidopsis thaliana (taxid:3702)]

 Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
 Identities = 214/426 (50%), Positives = 284/426 (66%)

Query:     2 ETQSSPKALTKLKSSCRSTELVICCTSLDSVTFLPLKDLRFVETAMLEHTWFISSMNDTH 61
             E Q  P+   ++KS   +  LV      +SVTFLPLKDLRF    +  HTWF+SS+ D  
Sbjct:    58 EQQQEPE---QIKSENETAYLVEKLR--ESVTFLPLKDLRFSNKPLEGHTWFMSSLYDNQ 112

Query:    62 EENEAEHLYFPSEASKGRLLCMKGRNKEDGTKNSYAFAWPESLPESATLLKGLTFVSDTY 121
              + E ++  FPSE+SKGRLLC+KG ++ DG+ N YA AWP++LP +A+L +GLTFVS  +
Sbjct:   113 TKGEVQYQEFPSESSKGRLLCLKGVDEHDGSWNYYALAWPQALPVNASLQEGLTFVSYNH 172

Query:   122 YDYKNLWHGLTAMVPFVSWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANXXXXXX 181
             YDY N+WHGL+AMVPFV+WS++++C  P RW+L+HWGELR +MG+WL  ++ A       
Sbjct:   173 YDYGNMWHGLSAMVPFVAWSLRHQCENPQRWVLYHWGELRFKMGNWLNEIITATYGQNTE 232

Query:   182 XXXXXXANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEK 241
                    N P CFEKA VMRHNEG M + R+++VFDL+RCKAR +C I+        +E 
Sbjct:   233 FLRFRDKNRPVCFEKAVVMRHNEGGMSRERRMEVFDLIRCKARHYCNIS-------LSET 285

Query:   242 GQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGT 301
              +  I +TLLMR G RSFKN +AV +IF  EC  V+GC LKV  S +L+FC+QV++M  T
Sbjct:   286 SKSRIGMTLLMRTGPRSFKNESAVIDIFKRECKNVEGCELKVSYSNNLTFCEQVELMRMT 345

Query:   302 DVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDP 361
             DV+ SPHGAQLTN++ MDRNSSVMEF PKGW +LAGVGQ  + W    SGMRH G+W DP
Sbjct:   346 DVLVSPHGAQLTNLVLMDRNSSVMEFLPKGWRKLAGVGQLVYQWGTRWSGMRHEGSWHDP 405

Query:   362 LVQEECPTPHNDLECFK-FDKNGQVGHNETYFAEWARSILNQVRISKLEQATRNRSNLGA 420
                E C  P  D  C     KNG++G+NETYF EWA+S+L + +  K+      + + G+
Sbjct:   406 -DGEICQFPDTDRRCMSSVYKNGRIGYNETYFGEWAKSVLGKFKERKMANVVGRKHSYGS 464

Query:   421 ---CVC 423
                C C
Sbjct:   465 LDGCWC 470


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      423       411   0.00080  118 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  310 KB (2158 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.74u 0.09s 28.83t   Elapsed:  00:00:01
  Total cpu time:  28.74u 0.09s 28.83t   Elapsed:  00:00:01
  Start:  Sat May 11 04:26:02 2013   End:  Sat May 11 04:26:03 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	423
pfam04577	206	pfam04577, DUF563, Protein of unknown function (DU	8e-17

>gnl|CDD|218156 pfam04577, DUF563, Protein of unknown function (DUF563)

 Score = 78.2 bits (193), Expect = 8e-17
 Identities = 49/239 (20%), Positives = 81/239 (33%), Gaps = 37/239 (15%)

Query: 126 NLWHGLTAMVPFVSWSIKNRCLRPNRWLLFH-WGELRDQMGSWLYHLMQANFGEVEIVGF 184
           N  H L   +P + W +    L  +  +L    G     +  +L  L      E  IV  
Sbjct: 2   NFGHWLLDFLPRL-WLLPEEILDDDIIVLIPDSGSPPPFIREFLELL---GIPEDRIVLK 57

Query: 185 EGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQP 244
               + P   E+  V      + G    L     LR   R    ++              
Sbjct: 58  Y---DEPVRVERLIVPSPPFPAGGYFGPL--LPRLRDLLRERFNLSKIKP---------- 102

Query: 245 IIRLTLLMRR--GSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTD 302
             R   + R+  G R   N   + E   +          ++   E LS  +QVK+ +   
Sbjct: 103 --RKVYISRKKAGRRRILNEDELEEALPKYG-------FEIVDPETLSLEEQVKLFSSAK 153

Query: 303 VVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWWDP 361
           V+  PHG+ LTN++FM   + V+E  P   L        +   +A   G+ +   + D 
Sbjct: 154 VIVGPHGSALTNLIFMPPGTGVVELVPPNRL------DPSFRNLAALLGLDYYYVYGDN 206

Family of uncharacterized proteins. Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	423
PF04577	206	DUF563: Protein of unknown function (DUF563); Inte	99.95
KOG4698	475	consensus Uncharacterized conserved protein [Funct	99.94
COG4421	368	Capsular polysaccharide biosynthesis protein [Carb	99.72
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	87.42
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	82.56

>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61

Probab=99.95  E-value=3.4e-27  Score=218.95  Aligned_cols=200  Identities=26%  Similarity=0.405  Sum_probs=141.3

Q ss_pred             CcchhHHHHHhhh-heeeccCcCCCCeeEEeeecccccchhhHHHHHHHhccC-CceeeeccCCCCCCeEeceEEEeccC
Q 014542          126 NLWHGLTAMVPFV-SWSIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFG-EVEIVGFEGGANGPYCFEKAAVMRHN  203 (423)
Q Consensus       126 Nl~H~~~dllpf~-s~~~~n~~~~~~r~il~~~g~~~~~m~~W~~~~l~~~Fs-~~~i~~~~~~~~~~vCF~~avv~~~~  203 (423)
                      |.+|++.|++|.+ .+.....  ..+..++...   .....+|..+++ ..++ +...+...  .++.+||++++++...
T Consensus         2 ~~gH~l~d~l~~l~~~~~~~~--~~~~~~l~~~---~~~~~~~~~~~l-~~lg~~~~~i~~~--~~~~~~~~~l~~~~~~   73 (206)
T PF04577_consen    2 NFGHFLIDFLPRLWYLPQYIP--DSDIIILVPD---DFDNPPFIREIL-ELLGIPENRIKID--SDEPVCFERLIVPSPP   73 (206)
T ss_pred             CCcEEHHHHHHHHHHHHHHCC--CCCeEEEEcC---CccccHHHHHHH-HHcCCCccEEEEc--CCCeEEECEEEEeCCC
Confidence            5679999999844 3332221  2222223221   113457877777 5555 33333222  4689999999998644


Q ss_pred             CCCCchhhHhhHhhHHHHHHhhhcCCCCCCCCCccccCCCCeeEEEEEEe--cCCCcccCHHHHHHHHHhhccccCCcEE
Q 014542          204 EGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMR--RGSRSFKNATAVTEIFAEECAMVDGCVL  281 (423)
Q Consensus       204 ~gg~~~~~~~~~~d~lR~~a~~~~~i~~~~~~~~~~~~~~p~irv~li~R--~~~R~i~Ne~ev~~~l~~~~~~~~G~~v  281 (423)
                      .....  +.......+|+..++..+++..         .+|  |+++++|  ++.|+|.|++||++.+++     .|  +
T Consensus        74 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------~~p--~i~~i~R~~~~~R~i~Ne~el~~~l~~-----~~--~  133 (206)
T PF04577_consen   74 YSPSD--FNPSFFPALRDRIRRKLNLPPP---------KRP--RILYISRRKSGSRRILNEDELLEILKK-----YG--F  133 (206)
T ss_pred             ccccC--cCchHHHHHHHHHHHHhCCccc---------CCC--eEEEEecCCCCCCcCcCHHHHHHHHhh-----CC--e
Confidence            32110  1112223556666555565431         234  6799999  589999999999999986     45  6


Q ss_pred             EEEeCCCCCHHHHHHHhcCCcEEEeechhhhhhhcccCCCcEEEEEeeCCcccccccchhHHHHHHhhcCCeeeeeec
Q 014542          282 KVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQYAHHWMADQSGMRHRGAWW  359 (423)
Q Consensus       282 ~vv~~~~ls~~eQv~l~~~adVlIgvHGAgLTN~lFm~pgs~viEi~P~g~~~~~g~~~~~Y~~lA~~~Gl~h~~~w~  359 (423)
                      ++++++++|+.||++++++|||+||+|||||+|++||+|||.||||+|+.+...      .|..+|..+|+.|++.+.
T Consensus       134 ~~v~~~~~s~~eqv~~~~~a~viig~hGs~l~n~~F~~~~s~viei~~~~~~~~------~~~~~a~~~~~~y~~v~~  205 (206)
T PF04577_consen  134 EVVDPEDLSFEEQVKLFASAKVIIGPHGSALTNLLFMPPGSTVIEIFPPNYYNR------HYRNLAQALGIHYYAVYG  205 (206)
T ss_pred             EEEeCCCCCHHHHHHHhcCCCEEEecCchHhheeeecCCCCEEEEEeCCCCCCH------HHHHHHHHcCCeEEEEeC
Confidence            788899999999999999999999999999999999999999999998877643      699999999999876553

Sequences are further processed into a mature form.; GO: 0016757 transferase activity, transferring glycosyl groups

>KOG4698 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.94  E-value=3.9e-27  Score=242.24  Aligned_cols=267  Identities=19%  Similarity=0.200  Sum_probs=176.5

Q ss_pred             eEEEEeccCCCCCcchhHHH-HHh-hhhee--eccCcCCCCeeEEeeecccccchhhHHHHHHH---hccCCceeeeccC
Q 014542          114 LTFVSDTYYDYKNLWHGLTA-MVP-FVSWS--IKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQ---ANFGEVEIVGFEG  186 (423)
Q Consensus       114 ~t~V~~~~~~~~Nl~H~~~d-llp-f~s~~--~~n~~~~~~r~il~~~g~~~~~m~~W~~~~l~---~~Fs~~~i~~~~~  186 (423)
                      .+.|+.++.-.+|.||+|+| ++| |++..  ..|    .+...+.+      ...+|++....   ..||+++.++++.
T Consensus       169 pa~vfs~Gg~tgn~yhdf~d~~ipL~it~~~~~~n----~ev~~li~------~~~~ww~~kf~Dvv~~lSn~~~v~~~~  238 (475)
T KOG4698|consen  169 PAIVFSTGGYTGNEYHDFNDGIIPLFITEAELRFN----KEVQFLIT------ETHSWWDMKFGDVVRQLSNYPVVDFDA  238 (475)
T ss_pred             chheeecCCcchhhHHHHHhhhhhhhcccchhccc----ccEEEEEE------EcchhhhhhHHHHHHhcCCCceEEecC
Confidence            33444444225899999999 566 56544  222    22222212      23455544443   4778899999887


Q ss_pred             CCCCCeEeceEEEeccCCCCCchh---------hHhhHhhHHHHHHhhh----cCCCCCCCCCccccCCCCeeEEEEEEe
Q 014542          187 GANGPYCFEKAAVMRHNEGSMGKA---------RKLQVFDLLRCKARGF----CGINPAGKGQEFNEKGQPIIRLTLLMR  253 (423)
Q Consensus       187 ~~~~~vCF~~avv~~~~~gg~~~~---------~~~~~~d~lR~~a~~~----~~i~~~~~~~~~~~~~~p~irv~li~R  253 (423)
                       +++++||+.+++|...+..+..+         ...-.|..+..++|..    ++++.+.      ..++|  |+++++|
T Consensus       239 -~~~ThcF~~~~vgL~~h~~y~v~~t~~~~~~~~s~~~fr~~l~~a~~~~i~~~~~t~~~------~~kkp--ri~~lsR  309 (475)
T KOG4698|consen  239 -ELRTHCFKEAIVGLVSHFPYAVNPTQPPPNGTLSMLDFRNLLDKALSPRIPEANVTAPE------PWKKP--RITILSR  309 (475)
T ss_pred             -CceEEEeeeeeeeeeecccccccCCcCCCccccccccHHHHHHHHhcccccccccCCcC------hhhCC--ceEEEec
Confidence             89999999999996333221111         1112344444555543    3333221      12234  5599999


Q ss_pred             cCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeechhhhhhhcccCCCcEEEEEeeCCcc
Q 014542          254 RGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWL  333 (423)
Q Consensus       254 ~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHGAgLTN~lFm~pgs~viEi~P~g~~  333 (423)
                      .++|.|+|++||.+.+++     .|++|.+++.+..++..|+++.+++||+||+|||||||++|+||++++|||.|+|..
T Consensus       310 ~~~r~Ilne~el~~~~~~-----~gf~v~~~~~~~t~v~~~~~i~~s~~vmiGvHGa~lth~lfl~~~~~~iqi~pcg~~  384 (475)
T KOG4698|consen  310 AGSRAILNEDELPRMLED-----IGFEVSVLRPDRTEVAKQLRITNSSDVMIGVHGAGLTHLLFLPPWAGVIQIYPCGDP  384 (475)
T ss_pred             ccchhhhcchhhhHHHHh-----CCCceEEecccccchhhhhheeeccceeeeccCccceeEEecCCcceEEEEEECCCc
Confidence            999999999999999998     599999999888999999999999999999999999999999999999999999976


Q ss_pred             cccccchhHHHHHHhhcCCeeeeeecCC-C------CCCCC-----CCC---CCc-cccc-ccccCCccccchhhHHHHH
Q 014542          334 ELAGVGQYAHHWMADQSGMRHRGAWWDP-L------VQEEC-----PTP---HND-LECF-KFDKNGQVGHNETYFAEWA  396 (423)
Q Consensus       334 ~~~g~~~~~Y~~lA~~~Gl~h~~~w~d~-~------~~~~c-----~~~---~~~-~~C~-~~yk~q~V~ln~t~f~~~l  396 (423)
                      .|++.  .+|..-|+.++++|.++--.+ .      ++.+.     |++   .++ ..-+ .+...|+|+++..||++.+
T Consensus       385 ~w~a~--~a~~~p~k~~~l~y~~ykI~~~es~l~~~y~~d~~~v~dp~s~~~~~f~~~k~~~yl~~q~v~ld~nRf~~~~  462 (475)
T KOG4698|consen  385 GWAAK--LARLRPAKYMTLEYAEYKIRAEESELYHKYGGDNTIVFDPISFQKKGFEETKKKVYLELQAVRLDINRFRKTL  462 (475)
T ss_pred             cchhh--hhhccccceeccccceeEEeecccceeeeccCCCceecccceeccccceeeeeeeeEeEeeeehhhhhcccch
Confidence            66432  244455555555543321000 0      11111     111   111 1112 3556799999999999998


Q ss_pred             HHHHHHHHHh
Q 014542          397 RSILNQVRIS  406 (423)
Q Consensus       397 ~~vl~~l~~~  406 (423)
                      -+++.....+
T Consensus       463 ~~a~~~~~~~  472 (475)
T KOG4698|consen  463 VKAYLKEITQ  472 (475)
T ss_pred             hHHHHHHHHh
Confidence            8888776655

>COG4421 Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism]

Probab=99.72  E-value=2.1e-16  Score=156.18  Aligned_cols=238  Identities=18%  Similarity=0.192  Sum_probs=147.0

Q ss_pred             CCceeeecCeEEEEeccCCCCCcchhHHHHHhhhhe-eeccCcCCCCeeEEeeecccccchhhHHHHHHHhccC-Cceee
Q 014542          105 PESATLLKGLTFVSDTYYDYKNLWHGLTAMVPFVSW-SIKNRCLRPNRWLLFHWGELRDQMGSWLYHLMQANFG-EVEIV  182 (423)
Q Consensus       105 p~~~~~i~G~t~V~~~~~~~~Nl~H~~~dllpf~s~-~~~n~~~~~~r~il~~~g~~~~~m~~W~~~~l~~~Fs-~~~i~  182 (423)
                      |+++.+++|-..+..-.+ ..|.-|.+.+++|++.. +..+- . .+-.++      ......|...++ .+++ +-+++
T Consensus       113 ~edAp~L~r~~v~~~~~~-~~~Yghflle~Lp~l~~i~~l~i-~-~~~pLl------~P~~~~wqadll-~m~~~~~~ii  182 (368)
T COG4421         113 PEDAPRLPRGAVFKEWGF-SFEYGHFLLENLPYLWQIKSLGI-L-SDPPLL------YPRLTEWQADLL-FMAGPDCPII  182 (368)
T ss_pred             CcCCCcCCCcceeccccc-ccccchhHHhhhHHHHHHhhhcc-c-ccCccc------CCcchHHHHhHH-hhcCCCCcee
Confidence            455558888887653222 35777888899996421 11111 0 011111      112344887777 4555 66776


Q ss_pred             eccCCCCCCeEeceEEEeccCCCCCchhhHhhHhhHHHHHHhhhcCCCCCCCCCccccCCCCeeEEEEEEec--CCCccc
Q 014542          183 GFEGGANGPYCFEKAAVMRHNEGSMGKARKLQVFDLLRCKARGFCGINPAGKGQEFNEKGQPIIRLTLLMRR--GSRSFK  260 (423)
Q Consensus       183 ~~~~~~~~~vCF~~avv~~~~~gg~~~~~~~~~~d~lR~~a~~~~~i~~~~~~~~~~~~~~p~irv~li~R~--~~R~i~  260 (423)
                      ..    ...||-..+++...+.-.++     +  ++++.+..+-.-+..+        .+.+  +.+|+||+  ..|+++
T Consensus       183 ~~----~p~V~~~~avl~~~~s~~~~-----h--a~l~~~~eR~~~~~~~--------~~~a--dkiYVSR~~qS~R~lv  241 (368)
T COG4421         183 AT----APAVPLGPAVLPVSGSPRYT-----H--ALLAWKDERVIAIKGK--------GKVA--DKIYVSRKAQSMRVLV  241 (368)
T ss_pred             ec----ccceeecccccCCCCCchhh-----h--HHHHHHhhhhhcccCC--------CCCc--ceEEEechhhHHHHhh
Confidence            64    56888888877643222111     1  2222222111111211        1112  23899996  579999


Q ss_pred             CHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeechhhhhhhcccCCCcEEEEEee--CCccccccc
Q 014542          261 NATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQLTNMLFMDRNSSVMEFFP--KGWLELAGV  338 (423)
Q Consensus       261 Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHGAgLTN~lFm~pgs~viEi~P--~g~~~~~g~  338 (423)
                      ||+||...+++     .|  +++|.+|+++..||+++|+.|.|++|+||+||.|.+|+++|+.||||-|  .+++     
T Consensus       242 nE~evE~~~q~-----~G--~~IVrPEtl~~~eQ~~LFr~AkvIvG~~GS~laNavF~~~~~kvvEI~~~~~~~~-----  309 (368)
T COG4421         242 NEEEVERLLQR-----SG--LTIVRPETLGPREQARLFRKAKVIVGPHGSGLANAVFAAPGCKVVEIQPGTTNFR-----  309 (368)
T ss_pred             CHHHHHHHHHh-----cC--cEEEechhcCHHHHHHHhhcceEEeccccchhhhheecCCCceEEEeccCCCcch-----
Confidence            99999999998     57  6789999999999999999999999999999999999999999999999  5553     


Q ss_pred             chhHHHH-HHhhcCCeeeeeecCCCCCCCCCCCCCcccccccccCCccccchhhHHHHHHHHHH
Q 014542          339 GQYAHHW-MADQSGMRHRGAWWDPLVQEECPTPHNDLECFKFDKNGQVGHNETYFAEWARSILN  401 (423)
Q Consensus       339 ~~~~Y~~-lA~~~Gl~h~~~w~d~~~~~~c~~~~~~~~C~~~yk~q~V~ln~t~f~~~l~~vl~  401 (423)
                        ..|.. ++...|.-+. ++.++  +..|+.+           .-++.+|+..+.++++....
T Consensus       310 --s~~vr~~~~~~g~~~~-~~ve~--q~nk~~~-----------~~pl~~~l~~~~af~~~~~~  357 (368)
T COG4421         310 --SFWVRMANYMSGDYYP-GYVEH--QTNKEAL-----------EDPLKINLDEAIAFLRRHDR  357 (368)
T ss_pred             --HHHHHHhhhcccceee-ccccc--CCCCCCC-----------CCcccccchHHHHHhhhhhH
Confidence              23443 4444444332 23332  2223332           23566666666666554433

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=87.42  E-value=2.4  Score=38.16  Aligned_cols=69  Identities=12%  Similarity=0.197  Sum_probs=49.1

Q ss_pred             EEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeechhh-hhhhcccCCCcEEE
Q 014542          247 RLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQ-LTNMLFMDRNSSVM  325 (423)
Q Consensus       247 rv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHGAg-LTN~lFm~pgs~vi  325 (423)
                      +++++.|....    -..+...|.+     .|..|.+....+-++.|   .+++|||+|+.=|.. +-..=|++||++||
T Consensus        30 ~v~VvGrs~~v----G~pla~lL~~-----~gatV~~~~~~t~~l~~---~v~~ADIVvsAtg~~~~i~~~~ikpGa~Vi   97 (140)
T cd05212          30 KVLVVGRSGIV----GAPLQCLLQR-----DGATVYSCDWKTIQLQS---KVHDADVVVVGSPKPEKVPTEWIKPGATVI   97 (140)
T ss_pred             EEEEECCCchH----HHHHHHHHHH-----CCCEEEEeCCCCcCHHH---HHhhCCEEEEecCCCCccCHHHcCCCCEEE
Confidence            55888876432    5567777776     47888888765555544   678999999998865 33444899999999


Q ss_pred             EE
Q 014542          326 EF  327 (423)
Q Consensus       326 Ei  327 (423)
                      -+
T Consensus        98 dv   99 (140)
T cd05212          98 NC   99 (140)
T ss_pred             Ec
Confidence            43

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=82.56  E-value=4.1  Score=40.87  Aligned_cols=71  Identities=11%  Similarity=0.172  Sum_probs=50.9

Q ss_pred             EEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeech-hhhhhhcccCCCcEEE
Q 014542          247 RLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHG-AQLTNMLFMDRNSSVM  325 (423)
Q Consensus       247 rv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHG-AgLTN~lFm~pgs~vi  325 (423)
                      +++++.|...+    -.-+...|..     .|..|.+....+-.+   -+.+.+|||+|+.=| +++..-=+.+||++||
T Consensus       154 ~V~ViGrs~~v----Grpla~lL~~-----~~atVtv~hs~t~~L---~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVI  221 (279)
T PRK14178        154 RAVVVGRSIDV----GRPMAALLLN-----ADATVTICHSKTENL---KAELRQADILVSAAGKAGFITPDMVKPGATVI  221 (279)
T ss_pred             EEEEECCCccc----cHHHHHHHHh-----CCCeeEEEecChhHH---HHHHhhCCEEEECCCcccccCHHHcCCCcEEE
Confidence            56899987433    3345555654     477788777654333   346679999999999 8777777789999999


Q ss_pred             EEee
Q 014542          326 EFFP  329 (423)
Q Consensus       326 Ei~P  329 (423)
                      .+--
T Consensus       222 DVgi  225 (279)
T PRK14178        222 DVGI  225 (279)
T ss_pred             Eeec
Confidence            9863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00