Citrus Sinensis ID: 014946

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
MATLQVTNPNELISSSTSFANSLHYNNSRSLSRKTMRKSAWKRCRSGNISCSFAPMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKVLDKAAGSQESRGVPLPLNTPTSPSTVNSRPPRKLFF
cccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccEEEEEEccccHHHHHHHHHcccccEEEEEEEcHHHHHHcccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHccEEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHHccccHHHHHccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEEEEEcccccccccccccccHHHHcccccccccccccccccccccccccccccccccccc
ccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHccccccEEEEEEcEHHHHccccccEEEEccHHHHccEcccccHHHHHHHHHHcHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEEEccHHHcHHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccEEEEEEEEEEccccHHHHHHHHHHccHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHccc
matlqvtnpnelisSSTSFANslhynnsrslsRKTMRKSAWKRcrsgniscsfapmeTAKIKVVgvggggnnaVNRMIGsglqgvdfyAINTDSQALLQSAAENPLQIGDLLtrglgtggnpllgeQAAEESKEVIANALKGSDLVFItagmgggtgsgaAPVVAQIAKEAGYLTVGvvtypfsfegrkRSSQALEAIERLQKNVDTlivipndrlldiTDEQTALQDAFLLADDVLRQGvqgisdiitipglvnvdfADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATlapligssiqsaTGVVYnitggkditlqEVNRVSQVVtsladpsaniifgavvddryngEIHVTIIATGFSQSFQKTLLTNPKAAKVLDkaagsqesrgvplplntptspstvnsrpprklff
matlqvtnpnelissSTSFANslhynnsrslsrktMRKSAWKRCRSgniscsfapmeTAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGIsdiitipglvnVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQAtlapligssiQSATGVVYNITGGKDITLQEVNRVSQVVtsladpsanIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKVLDKAagsqesrgvplplntptspstvnsrpprklff
MATLQVTNPNELISSSTSFANSLHYNNSRSLSRKTMRKSAWKRCRSGNISCSFAPMETAKIKvvgvggggnnavnRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIgdlltrglgtggnpllgEQAAEESKEVIANALKGSDLVFItagmgggtgsgaaPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKVLDKAAGSQESRGvplplntptspstvnsrpprKLFF
****************************************WKRCRSGNISCSFAPMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGG**************VIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRK***QALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGV*****************LAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLT*******************************************
********************************************************ETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGF*****************************************************
********PNELISSSTSFANSLHYN*****************CRSGNISCSFAPMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGV*************ATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKV***********GVPLPLNTP****************
*********NE***S*****N***************************ISCSFAPMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQ***************************************************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATLQVTNPNELISSSTSFANSLHYNNSRSLSRKTMRKSAWKRCRSGNISCSFAPMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKVLDKAAGSQESRGVPLPLNTPTSPSTVNSRPPRKLFF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query415 2.2.26 [Sep-21-2011]
Q42545433 Cell division protein Fts yes no 0.910 0.872 0.864 1e-172
P73456430 Cell division protein Fts N/A no 0.715 0.690 0.636 4e-99
P45482428 Cell division protein Fts yes no 0.778 0.754 0.629 1e-97
Q9K9T7382 Cell division protein Fts yes no 0.744 0.808 0.598 6e-92
Q9LXJ0473 Cell division protein Fts no no 0.737 0.646 0.607 3e-91
O82533478 Cell division protein Fts no no 0.737 0.640 0.607 5e-91
P0A030390 Cell division protein Fts yes no 0.691 0.735 0.588 1e-85
P0A031390 Cell division protein Fts yes no 0.691 0.735 0.588 1e-85
Q6GA26390 Cell division protein Fts yes no 0.691 0.735 0.588 1e-85
Q6GHP9390 Cell division protein Fts yes no 0.691 0.735 0.588 1e-85
>sp|Q42545|FTSZ1_ARATH Cell division protein FtsZ homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSZ1 PE=1 SV=2 Back     alignment and function desciption
 Score =  603 bits (1555), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 331/383 (86%), Positives = 358/383 (93%), Gaps = 5/383 (1%)

Query: 37  RKSAWKRCRSGNISCSFAPMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQA 96
           R+S   R +S  + CSF+PME+A+IKV+GVGGGGNNAVNRMI SGLQ VDFYAINTDSQA
Sbjct: 52  RRSDSTRSKSMRLRCSFSPMESARIKVIGVGGGGNNAVNRMISSGLQSVDFYAINTDSQA 111

Query: 97  LLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGT 156
           LLQS+AENPLQIG+LLTRGLGTGGNPLLGEQAAEESK+ IANALKGSDLVFITAGMGGGT
Sbjct: 112 LLQSSAENPLQIGELLTRGLGTGGNPLLGEQAAEESKDAIANALKGSDLVFITAGMGGGT 171

Query: 157 GSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRL 216
           GSGAAPVVAQI+K+AGYLTVGVVTYPFSFEGRKRS QALEAIE+LQKNVDTLIVIPNDRL
Sbjct: 172 GSGAAPVVAQISKDAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRL 231

Query: 217 LDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVG 276
           LDI DEQT LQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVG
Sbjct: 232 LDIADEQTPLQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVG 291

Query: 277 VSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPS 336
           VSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPS
Sbjct: 292 VSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPS 351

Query: 337 ANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKVLDK--AAGSQESRGVPL 394
           ANIIFGAVVDDRY GEIHVTIIATGFSQSFQKTLLT+P+AAK+LDK  ++G QE++G+ L
Sbjct: 352 ANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKTLLTDPRAAKLLDKMGSSGQQENKGMSL 411

Query: 395 PLNTPTSPSTVNSR--PPRKLFF 415
           P +   SPST++++   PR+LFF
Sbjct: 412 P-HQKQSPSTISTKSSSPRRLFF 433
Exhibits GTPase activity. Component of the plastid division machinery that forms a contractile ring at the division site. Required for plastid division in a dose-dependent manner. Involved in blue-light-induced chloroplast movements. May regulate thylakoid development.
Arabidopsis thaliana (taxid: 3702)
>sp|P73456|FTSZ_SYNY3 Cell division protein FtsZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ftsZ PE=1 SV=1 Back     alignment and function description
>sp|P45482|FTSZ_NOSS1 Cell division protein FtsZ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=ftsZ PE=3 SV=2 Back     alignment and function description
>sp|Q9K9T7|FTSZ_BACHD Cell division protein FtsZ OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=ftsZ PE=3 SV=1 Back     alignment and function description
>sp|Q9LXJ0|FTZ22_ARATH Cell division protein FtsZ homolog 2-2, chloroplastic OS=Arabidopsis thaliana GN=FTSZ2-2 PE=1 SV=1 Back     alignment and function description
>sp|O82533|FTZ21_ARATH Cell division protein FtsZ homolog 2-1, chloroplastic OS=Arabidopsis thaliana GN=FTSZ2-1 PE=1 SV=2 Back     alignment and function description
>sp|P0A030|FTSZ_STAAW Cell division protein FtsZ OS=Staphylococcus aureus (strain MW2) GN=ftsZ PE=3 SV=1 Back     alignment and function description
>sp|P0A031|FTSZ_STAAU Cell division protein FtsZ OS=Staphylococcus aureus GN=ftsZ PE=1 SV=1 Back     alignment and function description
>sp|Q6GA26|FTSZ_STAAS Cell division protein FtsZ OS=Staphylococcus aureus (strain MSSA476) GN=ftsZ PE=3 SV=1 Back     alignment and function description
>sp|Q6GHP9|FTSZ_STAAR Cell division protein FtsZ OS=Staphylococcus aureus (strain MRSA252) GN=ftsZ PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query415
378750399415 FtsZ1 protein [Manihot esculenta] 0.987 0.987 0.876 0.0
225460837422 PREDICTED: cell division protein ftsZ ho 0.997 0.981 0.855 0.0
255580778412 Cell division protein ftsZ, putative [Ri 0.978 0.985 0.843 1e-174
224061067410 predicted protein [Populus trichocarpa] 0.980 0.992 0.827 1e-173
47156057419 plastid-dividing ring protein [Solanum t 1.0 0.990 0.806 1e-170
15240490433 cell division protein ftsZ-like protein 0.910 0.872 0.864 1e-170
297796399433 ftsz1-1 [Arabidopsis lyrata subsp. lyrat 0.910 0.872 0.866 1e-170
388502944416 unknown [Lotus japonicus] 0.990 0.987 0.811 1e-169
1079732433 cpFtsZ [Arabidopsis thaliana] 0.910 0.872 0.861 1e-169
57833907418 plastid division protein [Medicago trunc 0.978 0.971 0.823 1e-169
>gi|378750399|gb|AFC37491.1| FtsZ1 protein [Manihot esculenta] Back     alignment and taxonomy information
 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/420 (87%), Positives = 389/420 (92%), Gaps = 10/420 (2%)

Query: 1   MATLQV--TNPNELISSSTSFANSLHYNNSRSLSRKTMRKSAWKRCRSGN--ISCSFAPM 56
           MATL +  +NPN   +SS S + SLH     S+S++T R S WKR RSG+  +SCSFAP+
Sbjct: 1   MATLHLHLSNPN---ASSPSLSTSLH--RKFSISQRTGRSSVWKRYRSGSGSVSCSFAPV 55

Query: 57  ETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGL 116
           E+AKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAA+NPLQIG+LLTRGL
Sbjct: 56  ESAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAQNPLQIGELLTRGL 115

Query: 117 GTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTV 176
           GTGGNPLLGEQAAEESKE IANALKGSDLVFITAGMGGGTGSGAAPVVAQI+KEAGYLTV
Sbjct: 116 GTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTV 175

Query: 177 GVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDV 236
           GVVTYPFSFEGRKRS QALEAIE+LQKNVDTLIVIPNDRLLDI DEQT LQDAFLLADDV
Sbjct: 176 GVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFLLADDV 235

Query: 237 LRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPL 296
           LRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPL
Sbjct: 236 LRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPL 295

Query: 297 IGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVT 356
           IGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVT
Sbjct: 296 IGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVT 355

Query: 357 IIATGFSQSFQKTLLTNPKAAKVLDKAAGSQESRGVPLPLNTPTSPSTVNSRP-PRKLFF 415
           IIATGFSQSFQKTLLT+P+AAK++DK +GSQE +GVPLPL   TSPSTV SRP PRKLFF
Sbjct: 356 IIATGFSQSFQKTLLTDPRAAKLVDKMSGSQEGKGVPLPLKPATSPSTVPSRPSPRKLFF 415

Source: Manihot esculenta

Species: Manihot esculenta

Genus: Manihot

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225460837|ref|XP_002276623.1| PREDICTED: cell division protein ftsZ homolog 1, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255580778|ref|XP_002531210.1| Cell division protein ftsZ, putative [Ricinus communis] gi|223529212|gb|EEF31187.1| Cell division protein ftsZ, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224061067|ref|XP_002300342.1| predicted protein [Populus trichocarpa] gi|222847600|gb|EEE85147.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|47156057|gb|AAT11924.1| plastid-dividing ring protein [Solanum tuberosum] Back     alignment and taxonomy information
>gi|15240490|ref|NP_200339.1| cell division protein ftsZ-like protein [Arabidopsis thaliana] gi|21903428|sp|Q42545.2|FTSZ1_ARATH RecName: Full=Cell division protein FtsZ homolog 1, chloroplastic; Short=AtFtsZ1; Short=AtFtsZ1-1; Short=Chloroplast FtsZ; Short=CpFtsZ; AltName: Full=Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 10; AltName: Full=Protein PLASTID MOVEMENT IMPAIRED4; Flags: Precursor gi|9758125|dbj|BAB08597.1| cell division protein FtsZ chloroplast homolog precursor [Arabidopsis thaliana] gi|14334638|gb|AAK59497.1| putative cell division protein FtsZ chloroplast homolog precursor [Arabidopsis thaliana] gi|21280801|gb|AAM44944.1| putative cell division protein FtsZ chloroplast homolog precursor [Arabidopsis thaliana] gi|332009226|gb|AED96609.1| cell division protein ftsZ-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297796399|ref|XP_002866084.1| ftsz1-1 [Arabidopsis lyrata subsp. lyrata] gi|297311919|gb|EFH42343.1| ftsz1-1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|388502944|gb|AFK39538.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|1079732|gb|AAA82068.1| cpFtsZ [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|57833907|emb|CAI44667.1| plastid division protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query415
TAIR|locus:2161610433 FTSZ1-1 "homolog of bacterial 0.942 0.903 0.725 1.2e-136
UNIPROTKB|P73456430 ftsZ "Cell division protein Ft 0.756 0.730 0.528 5.8e-82
TIGR_CMR|CHY_2060352 CHY_2060 "cell division protei 0.732 0.863 0.506 2.1e-75
TIGR_CMR|BA_4045386 BA_4045 "cell division protein 0.744 0.800 0.495 1.9e-74
TAIR|locus:2049455478 FTSZ2-1 [Arabidopsis thaliana 0.737 0.640 0.493 2.8e-73
TAIR|locus:2083258473 FTSZ2-2 [Arabidopsis thaliana 0.785 0.689 0.478 2.8e-73
UNIPROTKB|P17865382 ftsZ "Cell division protein Ft 0.759 0.824 0.470 2.9e-71
TIGR_CMR|DET_0343376 DET_0343 "cell division protei 0.746 0.824 0.456 5.6e-68
UNIPROTKB|P64170379 ftsZ "Cell division protein Ft 0.698 0.765 0.482 3.1e-67
TIGR_CMR|DET_0636376 DET_0636 "cell division protei 0.754 0.832 0.425 2.5e-65
TAIR|locus:2161610 FTSZ1-1 "homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
 Identities = 296/408 (72%), Positives = 322/408 (78%)

Query:     1 MATLQVTNPNELI--SSSTSF------ANSLHYN----NSR-SLSRK--TMRKSAWKRCR 45
             MA + +   NEL   SSS+SF      ++SLH +    +SR S  R   + R+S   R +
Sbjct:     1 MAIIPLAQLNELTISSSSSSFLTKSISSHSLHSSCICASSRISQFRGGFSKRRSDSTRSK 60

Query:    46 SGNISCSFAPMETAKIKXXXXXXXXXXXXXRMIGSGLQGVDFYAINTDSQALLQSAAENP 105
             S  + CSF+PME+A+IK             RMI SGLQ VDFYAINTDSQALLQS+AENP
Sbjct:    61 SMRLRCSFSPMESARIKVIGVGGGGNNAVNRMISSGLQSVDFYAINTDSQALLQSSAENP 120

Query:   106 LQIXXXXXXXXXXXXXXXXXEQAAEESKEVIANALKGSDLVFIXXXXXXXXXXXXXPVVA 165
             LQI                 EQAAEESK+ IANALKGSDLVFI             PVVA
Sbjct:   121 LQIGELLTRGLGTGGNPLLGEQAAEESKDAIANALKGSDLVFITAGMGGGTGSGAAPVVA 180

Query:   166 QIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTA 225
             QI+K+AGYLTVGVVTYPFSFEGRKRS QALEAIE+LQKNVDTLIVIPNDRLLDI DEQT 
Sbjct:   181 QISKDAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTP 240

Query:   226 LQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAE 285
             LQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAE
Sbjct:   241 LQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAE 300

Query:   286 EAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVV 345
             EAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVV
Sbjct:   301 EAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVV 360

Query:   346 DDRYNGEIHVTIIATGFSQSFQKTLLTNPKAAKVLDK--AAGSQESRG 391
             DDRY GEIHVTIIATGFSQSFQKTLLT+P+AAK+LDK  ++G QE++G
Sbjct:   361 DDRYTGEIHVTIIATGFSQSFQKTLLTDPRAAKLLDKMGSSGQQENKG 408
GO:0003924 "GTPase activity" evidence=IEA;IDA
GO:0005198 "structural molecule activity" evidence=ISS
GO:0005525 "GTP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0005874 "microtubule" evidence=IEA
GO:0006184 "GTP catabolic process" evidence=IEA
GO:0007017 "microtubule-based process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043234 "protein complex" evidence=IEA
GO:0051258 "protein polymerization" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009637 "response to blue light" evidence=IMP
GO:0009902 "chloroplast relocation" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0042802 "identical protein binding" evidence=IPI
GO:0043621 "protein self-association" evidence=IDA
GO:0043572 "plastid fission" evidence=IMP
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009658 "chloroplast organization" evidence=IMP
GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA
GO:0010020 "chloroplast fission" evidence=IMP
UNIPROTKB|P73456 ftsZ "Cell division protein FtsZ" [Synechocystis sp. PCC 6803 substr. Kazusa (taxid:1111708)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2060 CHY_2060 "cell division protein FtsZ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4045 BA_4045 "cell division protein FtsZ" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TAIR|locus:2049455 FTSZ2-1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083258 FTSZ2-2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P17865 ftsZ "Cell division protein FtsZ" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0343 DET_0343 "cell division protein FtsZ" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|P64170 ftsZ "Cell division protein FtsZ" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0636 DET_0636 "cell division protein FtsZ" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZCQ3FTSZ_RICPRNo assigned EC number0.52110.72040.6615yesno
P45500FTSZ_STRCONo assigned EC number0.57380.70120.7293yesno
P45501FTSZ_STRGRNo assigned EC number0.57380.70120.7149yesno
Q74JY1FTSZ_LACJONo assigned EC number0.54430.76140.6899yesno
Q5HGP5FTSZ_STAACNo assigned EC number0.58880.69150.7358yesno
P47204FTSZ_PSEAENo assigned EC number0.50330.71560.7538yesno
Q9CCE4FTSZ_MYCLENo assigned EC number0.55320.70120.7678yesno
Q6GA26FTSZ_STAASNo assigned EC number0.58880.69150.7358yesno
Q1RHL2FTSZ_RICBRNo assigned EC number0.53440.73010.6601yesno
P99108FTSZ_STAANNo assigned EC number0.58880.69150.7358yesno
P45482FTSZ_NOSS1No assigned EC number0.62990.77830.7546yesno
Q4UMT7FTSZ_RICFENo assigned EC number0.52440.72040.6615yesno
Q2FZ89FTSZ_STAA8No assigned EC number0.58880.69150.7358yesno
Q5JH31FTSZ1_PYRKONo assigned EC number0.50320.73730.8203yesno
O51929FTSZ_BUCAPNo assigned EC number0.52220.74690.8072yesno
P0A031FTSZ_STAAUNo assigned EC number0.58880.69150.7358yesno
P17865FTSZ_BACSUNo assigned EC number0.56330.71800.7801yesno
A5U4H7FTSZ_MYCTANo assigned EC number0.55440.70840.7757yesno
P0A030FTSZ_STAAWNo assigned EC number0.58880.69150.7358yesno
Q8CPK4FTSZ_STAESNo assigned EC number0.58880.69150.7284yesno
Q5HQ06FTSZ_STAEQNo assigned EC number0.58880.69150.7284yesno
P64170FTSZ_MYCTUNo assigned EC number0.55440.70840.7757yesno
P64171FTSZ_MYCBONo assigned EC number0.55440.70840.7757yesno
P45499FTSZ_KOCRDNo assigned EC number0.55700.73970.7379yesno
Q83MF6FTSZ_SHIFLNo assigned EC number0.47540.85780.9295yesno
Q68W73FTSZ_RICTYNo assigned EC number0.52110.72040.6615yesno
Q6GHP9FTSZ_STAARNo assigned EC number0.58880.69150.7358yesno
Q9K9T7FTSZ_BACHDNo assigned EC number0.59870.74450.8089yesno
O08458FTSZ_ENTHRNo assigned EC number0.53790.73010.7336yesno
Q92GV7FTSZ_RICCNNo assigned EC number0.53090.72040.6615yesno
Q42545FTSZ1_ARATHNo assigned EC number0.86420.91080.8729yesno
O83405FTSZ_TREPANo assigned EC number0.51300.73490.7296yesno
O08439FTSZ_ENTFANo assigned EC number0.56120.70840.7170yesno
P0A9A7FTSZ_ECOL6No assigned EC number0.46990.85780.9295yesno
P94337FTSZ_CORGLNo assigned EC number0.50980.82400.7737yesno
P0A029FTSZ_STAAMNo assigned EC number0.58880.69150.7358yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00027244001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (424 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00000431001
SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (510 aa)
•  •  • 0.957
GSVIVG00032399001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (228 aa)
•  •  • 0.956
GSVIVG00017740001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (320 aa)
•     • 0.952
GSVIVG00025526001
SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (402 aa)
•     • 0.948
GSVIVG00038228001
SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (344 aa)
•     • 0.942
GSVIVG00003447001
SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (374 aa)
• •   • 0.933
GSVIVG00037717001
SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (527 aa)
•     • 0.911
GSVIVG00003087001
SubName- Full=Chromosome undetermined scaffold_139, whole genome shotgun sequence; (510 aa)
•     • 0.899
GSVIVG00027807001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (471 aa)
•     • 0.888
GSVIVG00000640001
RecName- Full=DNA topoisomerase 2; EC=5.99.1.3; (661 aa)
•     • 0.857

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
PRK09330384 PRK09330, PRK09330, cell division protein FtsZ; Va 0.0
cd02201304 cd02201, FtsZ_type1, FtsZ is a GTPase that is simi 1e-178
TIGR00065349 TIGR00065, ftsZ, cell division protein FtsZ 1e-144
PRK13018378 PRK13018, PRK13018, cell division protein FtsZ; Pr 1e-141
COG0206338 COG0206, FtsZ, Cell division GTPase [Cell division 1e-136
cd02191303 cd02191, FtsZ, FtsZ is a GTPase that is similar to 1e-104
smart00864192 smart00864, Tubulin, Tubulin/FtsZ family, GTPase d 1e-90
pfam00091210 pfam00091, Tubulin, Tubulin/FtsZ family, GTPase do 9e-50
smart00865120 smart00865, Tubulin_C, Tubulin/FtsZ family, C-term 3e-37
pfam1232795 pfam12327, FtsZ_C, FtsZ family, C-terminal domain 5e-34
cd00286328 cd00286, Tubulin_FtsZ, Tubulin/FtsZ: Family includ 7e-30
cd02202349 cd02202, FtsZ_type2, FtsZ is a GTPase that is simi 3e-23
>gnl|CDD|236468 PRK09330, PRK09330, cell division protein FtsZ; Validated Back     alignment and domain information 
 Score =  529 bits (1366), Expect = 0.0
 Identities = 195/355 (54%), Positives = 254/355 (71%), Gaps = 4/355 (1%)

Query: 59  AKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGT 118
           A IKV+GVGGGG NAVNRMI  G+QGV+F A NTD+QALL+S A   +Q+G+ LTRGLG 
Sbjct: 14  AVIKVIGVGGGGGNAVNRMIEEGIQGVEFIAANTDAQALLKSKAPVKIQLGEKLTRGLGA 73

Query: 119 GGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGV 178
           G NP +G +AAEES+E I  AL+G+D+VFITAGMGGGTG+GAAPVVA+IAKE G LTV V
Sbjct: 74  GANPEVGRKAAEESREEIREALEGADMVFITAGMGGGTGTGAAPVVAEIAKELGILTVAV 133

Query: 179 VTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLR 238
           VT PFSFEG+KR  QA E IE L+K+VDTLIVIPND+LL++ D++T L DAF  ADDVLR
Sbjct: 134 VTKPFSFEGKKRMKQAEEGIEELRKHVDTLIVIPNDKLLEVVDKKTPLLDAFKAADDVLR 193

Query: 239 QGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLI- 297
           Q VQGI+D+IT PGL+N+DFADVK VM + G AM+G+G +S ++RA EAAE+A  +PL+ 
Sbjct: 194 QAVQGITDLITKPGLINLDFADVKTVMSEMGLAMMGIGEASGEDRAREAAEKAISSPLLE 253

Query: 298 GSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTI 357
              I  A GV+ NITGG D+TL EV   ++++   ADP ANIIFG V+D+    EI VT+
Sbjct: 254 DVDISGAKGVLVNITGGPDLTLFEVEEAAEIIREAADPDANIIFGTVIDEELGDEIRVTV 313

Query: 358 IATGFSQSFQKTLLTNPKAAKVLDKAAGSQESRGVPLPLNTPTSPSTVNSRPPRK 412
           IATGF    ++ ++   +  + ++          +P        P+  ++    +
Sbjct: 314 IATGFG---RQAVVPEKQEQQPVETRTDEAPVAPLPQEPQAVAEPAEASAAVEAQ 365

Length = 384
>gnl|CDD|100021 cd02201, FtsZ_type1, FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>gnl|CDD|232805 TIGR00065, ftsZ, cell division protein FtsZ Back     alignment and domain information
>gnl|CDD|237273 PRK13018, PRK13018, cell division protein FtsZ; Provisional Back     alignment and domain information
>gnl|CDD|223284 COG0206, FtsZ, Cell division GTPase [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|100020 cd02191, FtsZ, FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>gnl|CDD|214867 smart00864, Tubulin, Tubulin/FtsZ family, GTPase domain Back     alignment and domain information
>gnl|CDD|215710 pfam00091, Tubulin, Tubulin/FtsZ family, GTPase domain Back     alignment and domain information
>gnl|CDD|214868 smart00865, Tubulin_C, Tubulin/FtsZ family, C-terminal domain Back     alignment and domain information
>gnl|CDD|204882 pfam12327, FtsZ_C, FtsZ family, C-terminal domain Back     alignment and domain information
>gnl|CDD|100014 cd00286, Tubulin_FtsZ, Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation Back     alignment and domain information
>gnl|CDD|100022 cd02202, FtsZ_type2, FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 415
PRK09330384 cell division protein FtsZ; Validated 100.0
PRK13018378 cell division protein FtsZ; Provisional 100.0
TIGR00065349 ftsZ cell division protein FtsZ. This family consi 100.0
cd02201304 FtsZ_type1 FtsZ is a GTPase that is similar to the 100.0
cd02191303 FtsZ FtsZ is a GTPase that is similar to the eukar 100.0
COG0206338 FtsZ Cell division GTPase [Cell division and chrom 100.0
cd02202349 FtsZ_type2 FtsZ is a GTPase that is similar to the 100.0
cd00286328 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin 100.0
smart00864192 Tubulin Tubulin/FtsZ family, GTPase domain. This d 100.0
COG5023443 Tubulin [Cytoskeleton] 100.0
cd06059382 Tubulin The tubulin superfamily includes five dist 100.0
cd02190379 epsilon_tubulin The tubulin superfamily includes f 100.0
PTZ00387465 epsilon tubulin; Provisional 100.0
PF00091216 Tubulin: Tubulin/FtsZ family, GTPase domain; Inter 100.0
cd02187425 beta_tubulin The tubulin superfamily includes five 100.0
cd02186434 alpha_tubulin The tubulin superfamily includes fiv 100.0
PLN00222454 tubulin gamma chain; Provisional 100.0
cd02188431 gamma_tubulin Gamma-tubulin is a ubiquitous phylog 100.0
PTZ00335448 tubulin alpha chain; Provisional 99.98
PLN00220447 tubulin beta chain; Provisional 99.98
PTZ00010445 tubulin beta chain; Provisional 99.98
PLN00221450 tubulin alpha chain; Provisional 99.97
cd02189446 delta_tubulin The tubulin superfamily includes fiv 99.96
KOG1374448 consensus Gamma tubulin [Cytoskeleton] 99.91
PF1232795 FtsZ_C: FtsZ family, C-terminal domain; InterPro: 99.84
KOG1376407 consensus Alpha tubulin [Cytoskeleton] 99.8
KOG1375369 consensus Beta tubulin [Cytoskeleton] 99.6
smart00865120 Tubulin_C Tubulin/FtsZ family, C-terminal domain. 99.36
PF13809345 Tubulin_2: Tubulin like 99.07
cd06060493 misato Human Misato shows similarity with Tubulin/ 98.71
cd02202349 FtsZ_type2 FtsZ is a GTPase that is similar to the 96.83
PF03953126 Tubulin_C: Tubulin C-terminal domain; InterPro: IP 96.36
PF14881180 Tubulin_3: Tubulin domain 96.25
PRK06153393 hypothetical protein; Provisional 94.87
COG0569225 TrkA K+ transport systems, NAD-binding component [ 94.52
PRK11064415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 93.71
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 93.61
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 93.44
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 93.33
cd01483143 E1_enzyme_family Superfamily of activating enzymes 93.26
PF05368233 NmrA: NmrA-like family; InterPro: IPR008030 NmrA i 92.89
PF00056141 Ldh_1_N: lactate/malate dehydrogenase, NAD binding 92.77
KOG2013 603 consensus SMT3/SUMO-activating complex, catalytic 92.71
COG1179263 Dinucleotide-utilizing enzymes involved in molybdo 92.35
PTZ00082321 L-lactate dehydrogenase; Provisional 92.3
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 92.2
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 91.63
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 91.4
PF13460183 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X 91.34
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 90.63
PRK15116268 sulfur acceptor protein CsdL; Provisional 90.57
PRK05086312 malate dehydrogenase; Provisional 90.48
cd01485198 E1-1_like Ubiquitin activating enzyme (E1), repeat 90.25
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 90.25
PRK06223307 malate dehydrogenase; Reviewed 89.99
PRK10886196 DnaA initiator-associating protein DiaA; Provision 89.97
cd01484234 E1-2_like Ubiquitin activating enzyme (E1), repeat 89.67
PTZ00325321 malate dehydrogenase; Provisional 89.65
PRK07634245 pyrroline-5-carboxylate reductase; Reviewed 89.61
PRK08223287 hypothetical protein; Validated 89.57
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 89.47
KOG2015422 consensus NEDD8-activating complex, catalytic comp 89.39
PLN00112444 malate dehydrogenase (NADP); Provisional 89.22
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 89.1
PRK05690245 molybdopterin biosynthesis protein MoeB; Provision 88.98
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 88.66
cd05293312 LDH_1 A subgroup of L-lactate dehydrogenases. L-la 88.58
PRK08328231 hypothetical protein; Provisional 88.34
PLN00106323 malate dehydrogenase 88.32
TIGR01381664 E1_like_apg7 E1-like protein-activating enzyme Gsa 87.94
TIGR03693 637 ocin_ThiF_like putative thiazole-containing bacter 87.88
PTZ00117319 malate dehydrogenase; Provisional 87.66
PRK07679279 pyrroline-5-carboxylate reductase; Reviewed 87.51
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 87.39
PLN02602350 lactate dehydrogenase 87.32
cd05290307 LDH_3 A subgroup of L-lactate dehydrogenases. L-la 87.23
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 86.91
cd01488291 Uba3_RUB Ubiquitin activating enzyme (E1) subunit 86.64
PRK08762376 molybdopterin biosynthesis protein MoeB; Validated 86.54
PRK00414192 gmhA phosphoheptose isomerase; Reviewed 86.25
cd01492197 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit 86.22
cd00650263 LDH_MDH_like NAD-dependent, lactate dehydrogenase- 86.1
PRK05597355 molybdopterin biosynthesis protein MoeB; Validated 85.91
PLN02688266 pyrroline-5-carboxylate reductase 85.36
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 85.34
KOG2530483 consensus Members of tubulin/FtsZ family [Cytoskel 85.31
TIGR01772312 MDH_euk_gproteo malate dehydrogenase, NAD-dependen 85.2
TIGR03736244 PRTRC_ThiF PRTRC system ThiF family protein. A nov 85.19
PLN02657390 3,8-divinyl protochlorophyllide a 8-vinyl reductas 85.1
TIGR00872298 gnd_rel 6-phosphogluconate dehydrogenase (decarbox 85.02
PRK11880267 pyrroline-5-carboxylate reductase; Reviewed 84.98
PRK07411390 hypothetical protein; Validated 84.93
cd01489312 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit 84.77
PLN02353 473 probable UDP-glucose 6-dehydrogenase 84.75
TIGR01759323 MalateDH-SF1 malate dehydrogenase. This model repr 84.47
PRK07878392 molybdopterin biosynthesis-like protein MoeZ; Vali 84.41
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 84.21
cd01337310 MDH_glyoxysomal_mitochondrial Glyoxysomal and mito 84.13
COG1023300 Gnd Predicted 6-phosphogluconate dehydrogenase [Ca 84.12
PRK12491272 pyrroline-5-carboxylate reductase; Reviewed 84.08
PTZ00431260 pyrroline carboxylate reductase; Provisional 83.98
PRK05600370 thiamine biosynthesis protein ThiF; Validated 83.92
COG0039313 Mdh Malate/lactate dehydrogenases [Energy producti 83.56
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 83.43
PRK14851 679 hypothetical protein; Provisional 83.24
cd05294309 LDH-like_MDH_nadp A lactate dehydrogenases-like st 83.19
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 83.02
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 82.99
PF03435386 Saccharop_dh: Saccharopine dehydrogenase ; InterPr 82.93
PRK06545359 prephenate dehydrogenase; Validated 82.84
cd01491286 Ube1_repeat1 Ubiquitin activating enzyme (E1), rep 82.84
PRK13938196 phosphoheptose isomerase; Provisional 82.57
KOG0409327 consensus Predicted dehydrogenase [General functio 82.26
PF00289110 CPSase_L_chain: Carbamoyl-phosphate synthase L cha 82.18
KOG2018430 consensus Predicted dinucleotide-utilizing enzyme 82.01
PRK09496 453 trkA potassium transporter peripheral membrane com 81.79
cd01486307 Apg7 Apg7 is an E1-like protein, that activates tw 81.77
PRK15076431 alpha-galactosidase; Provisional 81.48
cd05296419 GH4_P_beta_glucosidase Glycoside Hydrolases Family 81.23
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 81.19
PRK04148134 hypothetical protein; Provisional 81.16
PRK13302271 putative L-aspartate dehydrogenase; Provisional 80.65
cd02191303 FtsZ FtsZ is a GTPase that is similar to the eukar 80.32
PLN02427386 UDP-apiose/xylose synthase 80.27
PRK13940414 glutamyl-tRNA reductase; Provisional 80.16
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 80.06
>PRK09330 cell division protein FtsZ; Validated Back     alignment and domain information 
Probab=100.00  E-value=1.8e-77  Score=605.07  Aligned_cols=309  Identities=62%  Similarity=0.953  Sum_probs=302.9

Q ss_pred             CCCCCCeEEEEeeCcchHHHHHHHHHcCCCceEEEEEECCHHHHhcCCCCCCeeccccccccCCCCCCchhhHHHHHHHH
Q 014946           54 APMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESK  133 (415)
Q Consensus        54 ~~~~~~~i~vIGvGgaG~niv~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~G~GaG~n~~~G~~~aee~~  133 (415)
                      ......+|+||||||||||+|++|++.++++++|||+|||.|+|..+++++||+||+.+|+|+|+|+||++|+++++++.
T Consensus         9 ~~~~~~~IkViGvGG~G~Nav~~m~~~~~~~v~fia~NTD~q~L~~~~a~~ki~lG~~~t~GlGaG~~pe~G~~aaee~~   88 (384)
T PRK09330          9 EENQGAVIKVIGVGGGGGNAVNRMIEEGIQGVEFIAANTDAQALLKSKAPVKIQLGEKLTRGLGAGANPEVGRKAAEESR   88 (384)
T ss_pred             ccccCCeEEEEEECCcHHHHHHHHHHcCCCCceEEEEeCcHHHHhcCCCCeEEEcCCcccccCCCCCCHHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCEEEEeccCCCCccCChHHHHHHHHHHhCCceEEEEecCCCCchhhhHHHHHHHHHHHHhhCCEEEEEeC
Q 014946          134 EVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPN  213 (415)
Q Consensus       134 e~I~~~le~~D~~~I~agLGGGTGSG~apvia~~ake~g~~tvavvtlP~~~Eg~~r~~nA~~~l~~L~e~~D~viv~dN  213 (415)
                      ++|+++|++||+|||+||||||||||++|+|++++||+|+++|+|||+||.|||.+|++||.++|++|++++|++|+|||
T Consensus        89 e~I~~~l~~~D~vfI~AGmGGGTGTGaapvIA~iake~g~ltvaVvt~PF~fEG~~r~~nA~~gL~~L~~~~D~vIvi~N  168 (384)
T PRK09330         89 EEIREALEGADMVFITAGMGGGTGTGAAPVVAEIAKELGILTVAVVTKPFSFEGKKRMKQAEEGIEELRKHVDTLIVIPN  168 (384)
T ss_pred             HHHHHHHcCCCEEEEEecCCCcccHHHHHHHHHHHHHcCCcEEEEEecCccccchhHHHHHHHHHHHHHHHCCEEEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhccccCChHHHHhhhhhhhhccccccccccccCceeeechhhhhhhccCCCeeEEEeeecCCcchHHHHHHHHhc
Q 014946          214 DRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATL  293 (415)
Q Consensus       214 d~L~~~~~~~~~i~~af~~~N~~i~~~i~~It~~i~~~G~invD~~di~t~L~~~g~~~ig~G~a~g~~ra~~A~~~Al~  293 (415)
                      |+|++.++++.++.++|+.+|++|++.|++|++++++||++|+||+|++++|+.+|.++||+|.+++++|+.+|+++|++
T Consensus       169 d~L~~~~~~~~~l~~Af~~ad~vL~~~v~~It~~i~~pG~iNvDfaDvk~vm~~~G~a~~G~G~a~g~~ra~~A~~~Ai~  248 (384)
T PRK09330        169 DKLLEVVDKKTPLLDAFKAADDVLRQAVQGITDLITKPGLINLDFADVKTVMSEMGLAMMGIGEASGEDRAREAAEKAIS  248 (384)
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCHHHHHHHHhcCCeEEEEEEEecCccHHHHHHHHHHh
Confidence            99999998789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc-cCccccccceEEeecCCCCCHHHHHHHHHHHHhhcCCCCcEEEEeeecCCCCCeEEEEEEEeCC
Q 014946          294 APLIG-SSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGF  362 (415)
Q Consensus       294 spll~-~~i~~a~g~Lv~I~gg~disl~ev~~i~~~i~~~~~~~a~Ii~G~~~d~~l~~~i~VtvIatG~  362 (415)
                      +|||+ .++.+|+++|++|+++++++++|++++++.+++..+++++|+||..++|+++++++|||||||+
T Consensus       249 spLl~~~~i~~A~~vLv~I~g~~~l~l~e~~~~~~~i~~~~~~~a~Ii~G~~~d~~l~~~i~VtviatG~  318 (384)
T PRK09330        249 SPLLEDVDISGAKGVLVNITGGPDLTLFEVEEAAEIIREAADPDANIIFGTVIDEELGDEIRVTVIATGF  318 (384)
T ss_pred             CcCcCCCChhhcceEEEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEeeeeCCCcCCeEEEEEEEccC
Confidence            99998 6899999999999999999999999999999999999999999999999999999999999999

>PRK13018 cell division protein FtsZ; Provisional Back     alignment and domain information
>TIGR00065 ftsZ cell division protein FtsZ Back     alignment and domain information
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning] Back     alignment and domain information
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation Back     alignment and domain information
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain Back     alignment and domain information
>COG5023 Tubulin [Cytoskeleton] Back     alignment and domain information
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa Back     alignment and domain information
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa Back     alignment and domain information
>PTZ00387 epsilon tubulin; Provisional Back     alignment and domain information
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins Back     alignment and domain information
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa Back     alignment and domain information
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa Back     alignment and domain information
>PLN00222 tubulin gamma chain; Provisional Back     alignment and domain information
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily Back     alignment and domain information
>PTZ00335 tubulin alpha chain; Provisional Back     alignment and domain information
>PLN00220 tubulin beta chain; Provisional Back     alignment and domain information
>PTZ00010 tubulin beta chain; Provisional Back     alignment and domain information
>PLN00221 tubulin alpha chain; Provisional Back     alignment and domain information
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa Back     alignment and domain information
>KOG1374 consensus Gamma tubulin [Cytoskeleton] Back     alignment and domain information
>PF12327 FtsZ_C: FtsZ family, C-terminal domain; InterPro: IPR024757 The FtsZ family of proteins are involved in polymer formation Back     alignment and domain information
>KOG1376 consensus Alpha tubulin [Cytoskeleton] Back     alignment and domain information
>KOG1375 consensus Beta tubulin [Cytoskeleton] Back     alignment and domain information
>smart00865 Tubulin_C Tubulin/FtsZ family, C-terminal domain Back     alignment and domain information
>PF13809 Tubulin_2: Tubulin like Back     alignment and domain information
>cd06060 misato Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria Back     alignment and domain information
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>PF03953 Tubulin_C: Tubulin C-terminal domain; InterPro: IPR018316 This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins Back     alignment and domain information
>PF14881 Tubulin_3: Tubulin domain Back     alignment and domain information
>PRK06153 hypothetical protein; Provisional Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA Back     alignment and domain information
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] Back     alignment and domain information
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK05086 malate dehydrogenase; Provisional Back     alignment and domain information
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>PRK10886 DnaA initiator-associating protein DiaA; Provisional Back     alignment and domain information
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like Back     alignment and domain information
>PTZ00325 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>KOG2015 consensus NEDD8-activating complex, catalytic component UBA3 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN00112 malate dehydrogenase (NADP); Provisional Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK08328 hypothetical protein; Provisional Back     alignment and domain information
>PLN00106 malate dehydrogenase Back     alignment and domain information
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p Back     alignment and domain information
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02602 lactate dehydrogenase Back     alignment and domain information
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PRK00414 gmhA phosphoheptose isomerase; Reviewed Back     alignment and domain information
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 Back     alignment and domain information
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family Back     alignment and domain information
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PLN02688 pyrroline-5-carboxylate reductase Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>KOG2530 consensus Members of tubulin/FtsZ family [Cytoskeleton] Back     alignment and domain information
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent Back     alignment and domain information
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein Back     alignment and domain information
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase Back     alignment and domain information
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) Back     alignment and domain information
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK07411 hypothetical protein; Validated Back     alignment and domain information
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>TIGR01759 MalateDH-SF1 malate dehydrogenase Back     alignment and domain information
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases Back     alignment and domain information
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PTZ00431 pyrroline carboxylate reductase; Provisional Back     alignment and domain information
>PRK05600 thiamine biosynthesis protein ThiF; Validated Back     alignment and domain information
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK14851 hypothetical protein; Provisional Back     alignment and domain information
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase Back     alignment and domain information
>PRK06545 prephenate dehydrogenase; Validated Back     alignment and domain information
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 Back     alignment and domain information
>PRK13938 phosphoheptose isomerase; Provisional Back     alignment and domain information
>KOG0409 consensus Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively Back     alignment and domain information
>PRK15076 alpha-galactosidase; Provisional Back     alignment and domain information
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>PRK13302 putative L-aspartate dehydrogenase; Provisional Back     alignment and domain information
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes Back     alignment and domain information
>PLN02427 UDP-apiose/xylose synthase Back     alignment and domain information
>PRK13940 glutamyl-tRNA reductase; Provisional Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
3vo8_A392 Staphylococcus Aureus Ftsz Gdp-Form Length = 392 2e-76
2vam_A382 Ftsz B. Subtilis Length = 382 2e-76
4dxd_A396 Staphylococcal Aureus Ftsz In Complex With 723 Leng 2e-76
2rhh_A325 Synthetic Gene Encoded Bacillus Subtilis Ftsz With 4e-76
3voa_A308 Staphylococcus Aureus Ftsz 12-316 Gdp-Form Length = 4e-76
2q1x_A379 Crystal Structure Of Cell Division Protein Ftsz Fro 3e-72
1rlu_A382 Mycobacterium Tuberculosis Ftsz In Complex With Gtp 4e-72
3vo9_A308 Staphylococcus Aureus Ftsz Apo-Form (Semet) Length 1e-71
4e6e_A314 Crystal Structure Of A Putative Cell Division Prote 8e-70
2vaw_A394 Ftsz Pseudomonas Aeruginosa Gdp Length = 394 5e-60
1ofu_A320 Crystal Structure Of Sula:ftsz From Pseudomonas Aer 3e-59
1w5f_A353 Ftsz, T7 Mutated, Domain Swapped (T. Maritima) Leng 8e-54
1w5e_A364 Ftsz W319y Mutant, P1 (m. Jannaschii) Length = 364 9e-53
1fsz_A372 Crystal Structure Of The Cell-Division Protein Ftsz 1e-52
1w58_1364 Ftsz Gmpcpp Soak I213 (M. Jannaschii) Length = 364 1e-52
2r6r_1338 Aquifex Aeolicus Ftsz Length = 338 1e-47
>pdb|3VO8|A Chain A, Staphylococcus Aureus Ftsz Gdp-Form Length = 392 Back     alignment and structure 
Iteration: 1

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/287 (51%), Positives = 194/287 (67%)
Query: 76  RMIGSGLQGVDFYAINTDSQALLQSAAENPLQIXXXXXXXXXXXXXXXXXEQAAEESKEV 135
           RMI  G+  V+F AINTD QAL  S AE+ +QI                 ++AAEES+E 
Sbjct: 31  RMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESREQ 90
Query: 136 IANALKGSDLVFIXXXXXXXXXXXXXPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQAL 195
           I +A++G+D+VF+             PVVA+IAKE G LTVGVVT PFSFEGRKR +QA 
Sbjct: 91  IEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAA 150
Query: 196 EAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVN 255
             +E ++  VDTLIVIPNDRLLDI D+ T + +AF  AD+VLRQGVQGISD+I + G VN
Sbjct: 151 AGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVN 210
Query: 256 VDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGK 315
           +DFADVK +M + G+A++G+GVSS +NRA EAA++A  +PL+ +SI  A GV+ NITGG+
Sbjct: 211 LDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNITGGE 270
Query: 316 DITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGF 362
            ++L E    + +V   AD   N+IFG V++     EI VT+IATGF
Sbjct: 271 SLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGF 317
>pdb|2VAM|A Chain A, Ftsz B. Subtilis Length = 382 Back     alignment and structure
>pdb|4DXD|A Chain A, Staphylococcal Aureus Ftsz In Complex With 723 Length = 396 Back     alignment and structure
>pdb|2RHH|A Chain A, Synthetic Gene Encoded Bacillus Subtilis Ftsz With Bound Sulfate Ion Length = 325 Back     alignment and structure
>pdb|3VOA|A Chain A, Staphylococcus Aureus Ftsz 12-316 Gdp-Form Length = 308 Back     alignment and structure
>pdb|2Q1X|A Chain A, Crystal Structure Of Cell Division Protein Ftsz From Mycobacterium Tuberculosis In Complex With Citrate. Length = 379 Back     alignment and structure
>pdb|1RLU|A Chain A, Mycobacterium Tuberculosis Ftsz In Complex With Gtp-Gamma-S Length = 382 Back     alignment and structure
>pdb|3VO9|A Chain A, Staphylococcus Aureus Ftsz Apo-Form (Semet) Length = 308 Back     alignment and structure
>pdb|4E6E|A Chain A, Crystal Structure Of A Putative Cell Division Protein Ftsz (Tfu_1113) From Thermobifida Fusca Yx-Er1 At 2.22 A Resolution Length = 314 Back     alignment and structure
>pdb|2VAW|A Chain A, Ftsz Pseudomonas Aeruginosa Gdp Length = 394 Back     alignment and structure
>pdb|1OFU|A Chain A, Crystal Structure Of Sula:ftsz From Pseudomonas Aeruginosa Length = 320 Back     alignment and structure
>pdb|1W5F|A Chain A, Ftsz, T7 Mutated, Domain Swapped (T. Maritima) Length = 353 Back     alignment and structure
>pdb|1W5E|A Chain A, Ftsz W319y Mutant, P1 (m. Jannaschii) Length = 364 Back     alignment and structure
>pdb|1FSZ|A Chain A, Crystal Structure Of The Cell-Division Protein Ftsz At 2.8a Resolution Length = 372 Back     alignment and structure
>pdb|1W58|1 Chain 1, Ftsz Gmpcpp Soak I213 (M. Jannaschii) Length = 364 Back     alignment and structure
>pdb|2R6R|1 Chain 1, Aquifex Aeolicus Ftsz Length = 338 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query415
4dxd_A396 Cell division protein FTSZ; rossmann fold, GTPase, 0.0
2vxy_A382 FTSZ, cell division protein FTSZ; GTP-binding, nuc 0.0
1rq2_A382 Cell division protein FTSZ; cell cycle, tubulin, G 0.0
2r75_1338 Cell division protein FTSZ; GTPase, tubulin-like, 0.0
2vap_A364 FTSZ, cell division protein FTSZ homolog 1; polyme 0.0
1w5f_A353 Cell division protein FTSZ; complete proteome, GTP 0.0
1ofu_A320 FTSZ, cell division protein FTSZ; bacterial cell d 0.0
2vaw_A394 FTSZ, cell division protein FTSZ; bacterial cell d 0.0
4ei7_A389 Plasmid replication protein REPX; GTP hydrolase, p 1e-100
3v3t_A360 Cell division GTPase FTSZ, diverged; TUBZ, tubulin 2e-66
3m89_A427 FTSZ/tubulin-related protein; partition, TUBZ, GTP 2e-20
3r4v_A315 Putative uncharacterized protein; tubulin, unknown 3e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} Length = 396 Back     alignment and structure
 Score =  548 bits (1413), Expect = 0.0
 Identities = 186/356 (52%), Positives = 245/356 (68%)

Query: 57  ETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGL 116
             A +KV+GVGGGGNNAVNRMI  G+  V+F AINTD QAL  S AE+ +QIG+ LTRGL
Sbjct: 16  HLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGL 75

Query: 117 GTGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTV 176
           G G NP +G++AAEES+E I +A++G+D+VF+T+GMGGGTG+GAAPVVA+IAKE G LTV
Sbjct: 76  GAGANPEIGKKAAEESREQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTV 135

Query: 177 GVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDV 236
           GVVT PFSFEGRKR +QA   +E ++  VDTLIVIPNDRLLDI D+ T + +AF  AD+V
Sbjct: 136 GVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFKEADNV 195

Query: 237 LRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPL 296
           LRQGVQGISD+I + G VN+DFADVK +M + G+A++G+GVSS +NRA EAA++A  +PL
Sbjct: 196 LRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPL 255

Query: 297 IGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVT 356
           + +SI  A GV+ NITGG+ ++L E    + +V   AD   N+IFG V++     EI VT
Sbjct: 256 LETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVT 315

Query: 357 IIATGFSQSFQKTLLTNPKAAKVLDKAAGSQESRGVPLPLNTPTSPSTVNSRPPRK 412
           +IATGF          +            S  +       +  ++    +S   R 
Sbjct: 316 VIATGFDDKPTSHGRKSGSTGFGTSVNTSSNATSKDESFTSNSSNAQATDSVSERT 371
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A* Length = 382 Back     alignment and structure
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A* Length = 382 Back     alignment and structure
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1* Length = 338 Back     alignment and structure
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A* Length = 364 Back     alignment and structure
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1 Length = 353 Back     alignment and structure
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1 Length = 320 Back     alignment and structure
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1 Length = 394 Back     alignment and structure
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A* Length = 389 Back     alignment and structure
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C} Length = 360 Back     alignment and structure
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A* Length = 427 Back     alignment and structure
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A* Length = 315 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query415
4dxd_A396 Cell division protein FTSZ; rossmann fold, GTPase, 100.0
1ofu_A320 FTSZ, cell division protein FTSZ; bacterial cell d 100.0
2vxy_A382 FTSZ, cell division protein FTSZ; GTP-binding, nuc 100.0
1w5f_A353 Cell division protein FTSZ; complete proteome, GTP 100.0
1rq2_A382 Cell division protein FTSZ; cell cycle, tubulin, G 100.0
2vap_A364 FTSZ, cell division protein FTSZ homolog 1; polyme 100.0
2vaw_A394 FTSZ, cell division protein FTSZ; bacterial cell d 100.0
2r75_1338 Cell division protein FTSZ; GTPase, tubulin-like, 100.0
4ei7_A389 Plasmid replication protein REPX; GTP hydrolase, p 100.0
3v3t_A360 Cell division GTPase FTSZ, diverged; TUBZ, tubulin 100.0
3m89_A427 FTSZ/tubulin-related protein; partition, TUBZ, GTP 100.0
2btq_B426 Tubulin btubb; structural protein, cytoskeletal pr 100.0
2bto_A473 Tubulin btuba; bacterial tubulin, polymerization, 100.0
3cb2_A475 Gamma-1-tubulin, tubulin gamma-1 chain; lattice, m 100.0
3ryc_B445 Tubulin beta chain; alpha-tubulin, beta-tubulin, G 100.0
3ryc_A451 Tubulin alpha chain; alpha-tubulin, beta-tubulin, 100.0
3r4v_A315 Putative uncharacterized protein; tubulin, unknown 100.0
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 96.1
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 94.26
1smk_A326 Malate dehydrogenase, glyoxysomal; tricarboxylic c 94.13
3fi9_A343 Malate dehydrogenase; structural genomics, oxidore 93.91
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 93.83
1mld_A314 Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D 93.62
1lss_A140 TRK system potassium uptake protein TRKA homolog; 93.13
3c85_A183 Putative glutathione-regulated potassium-efflux S 93.02
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 93.01
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 92.95
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 92.86
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 92.72
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 92.71
1b8p_A329 Protein (malate dehydrogenase); oxidoreductase; 1. 92.71
1id1_A153 Putative potassium channel protein; RCK domain, E. 92.62
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 92.49
3dhn_A227 NAD-dependent epimerase/dehydratase; reductase, PF 92.45
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 92.25
1xq6_A253 Unknown protein; structural genomics, protein stru 91.91
1o6z_A303 MDH, malate dehydrogenase; halophilic, ION-binding 91.5
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 91.44
3h5n_A353 MCCB protein; ubiquitin-activating enzyme, microci 91.27
3l9w_A413 Glutathione-regulated potassium-efflux system Pro 91.21
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 91.17
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 90.9
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 90.72
3p7m_A321 Malate dehydrogenase; putative dehydrogenase, enzy 90.67
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 90.61
3abi_A365 Putative uncharacterized protein PH1688; L-lysine 90.5
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 90.5
3dqp_A219 Oxidoreductase YLBE; alpha-beta protein., structur 90.4
3i6i_A346 Putative leucoanthocyanidin reductase 1; rossmann 90.22
3e48_A289 Putative nucleoside-diphosphate-sugar epimerase; a 90.2
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 90.02
2x0j_A294 Malate dehydrogenase; oxidoreductase, hyperthermop 89.83
3e8x_A236 Putative NAD-dependent epimerase/dehydratase; stru 89.65
1s6y_A450 6-phospho-beta-glucosidase; hydrolase, structural 88.74
2r6j_A318 Eugenol synthase 1; phenylpropene, PIP reductase, 88.63
3ew7_A221 LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend 88.61
3gvi_A324 Malate dehydrogenase; NAD, oxidoreductase, tricarb 88.48
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 88.47
4aj2_A331 L-lactate dehydrogenase A chain; oxidoreductase-in 88.44
4g65_A 461 TRK system potassium uptake protein TRKA; structur 88.1
2x4g_A342 Nucleoside-diphosphate-sugar epimerase; isomerase; 88.04
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 87.97
2z2v_A365 Hypothetical protein PH1688; L-lysine dehydrogenas 87.93
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 87.91
1oju_A294 MDH, malate dehydrogenase; hyperthermophilic, oxid 87.64
4id9_A347 Short-chain dehydrogenase/reductase; putative dehy 87.51
2iz1_A 474 6-phosphogluconate dehydrogenase, decarboxylating; 87.49
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 87.35
2xxj_A310 L-LDH, L-lactate dehydrogenase; oxidoreductase, hy 87.32
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 86.97
1ur5_A309 Malate dehydrogenase; oxidoreductase, tricarboxyli 86.96
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 86.83
1qyd_A313 Pinoresinol-lariciresinol reductase; NADPH-depende 86.61
3tl2_A315 Malate dehydrogenase; center for structural genomi 86.55
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 86.06
3nep_X314 Malate dehydrogenase; halophIle, molecular adpatat 85.77
1hye_A313 L-lactate/malate dehydrogenase; nucleotide binding 85.59
1u8x_X472 Maltose-6'-phosphate glucosidase; structural genom 85.59
3u95_A 477 Glycoside hydrolase, family 4; hydrolysis, cytosol 85.06
1y7t_A327 Malate dehydrogenase; NAD-dependent-MDH-NADPH comp 85.02
1obb_A 480 Maltase, alpha-glucosidase; glycosidase, sulfinic 84.97
2zcu_A286 Uncharacterized oxidoreductase YTFG; alpha-beta sa 84.76
3r6d_A221 NAD-dependent epimerase/dehydratase; structural ge 84.72
3hhp_A312 Malate dehydrogenase; MDH, citric acid cycle, TCA 84.5
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 84.25
4h7p_A345 Malate dehydrogenase; ssgcid, structural G seattle 84.17
2gas_A307 Isoflavone reductase; NADPH-dependent reductase, o 83.91
2x6t_A357 ADP-L-glycero-D-manno-heptose-6-epimerase; isomera 83.81
3c1o_A321 Eugenol synthase; phenylpropene, PIP reductase, sh 83.5
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 83.47
4egb_A346 DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce 83.36
3qvo_A236 NMRA family protein; structural genomics, PSI-biol 83.21
3e9m_A330 Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, 82.94
3q2i_A354 Dehydrogenase; rossmann fold, UDP-sugar binding, N 82.81
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 82.78
2jl1_A287 Triphenylmethane reductase; oxidoreductase, biorem 82.08
1xgk_A352 Nitrogen metabolite repression regulator NMRA; ros 81.96
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 81.89
2zyd_A 480 6-phosphogluconate dehydrogenase, decarboxylating; 81.89
3ec7_A357 Putative dehydrogenase; alpha-beta, structural gen 81.85
4gbj_A297 6-phosphogluconate dehydrogenase NAD-binding; stru 81.83
1ff9_A 450 Saccharopine reductase; lysine biosynthesis, alpha 81.76
1qyc_A308 Phenylcoumaran benzylic ether reductase PT1; NADPH 81.56
3ktd_A341 Prephenate dehydrogenase; structural genomics, joi 81.48
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 81.33
1mv8_A436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 81.28
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 81.17
2d4a_B308 Malate dehydrogenase; archaea, hyperthermophIle, o 81.13
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 80.79
3st7_A369 Capsular polysaccharide synthesis enzyme CAP5F; ro 80.65
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 80.61
3uuw_A308 Putative oxidoreductase with NAD(P)-binding rossm 80.53
2hun_A336 336AA long hypothetical DTDP-glucose 4,6-dehydrat; 80.31
1tt5_B434 Ubiquitin-activating enzyme E1C isoform 1; cell cy 80.17
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A* Back     alignment and structure
Probab=100.00  E-value=1.4e-81  Score=630.71  Aligned_cols=313  Identities=58%  Similarity=0.907  Sum_probs=302.9

Q ss_pred             CCCCCCeEEEEeeCcchHHHHHHHHHcCCCceEEEEEECCHHHHhcCCCCCCeeccccccccCCCCCCchhhHHHHHHHH
Q 014946           54 APMETAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESK  133 (415)
Q Consensus        54 ~~~~~~~i~vIGvGgaG~niv~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~G~GaG~n~~~G~~~aee~~  133 (415)
                      .+...++|+||||||||||+||+|++.++++++|||+|||.|+|..+++++||+||+.+|+|+|||+||++|+++++++.
T Consensus        13 ~~~~~~~IkVIGVGG~G~NaVn~m~~~~~~gvefiaiNTD~qaL~~s~a~~ki~lG~~~t~GlGAG~np~vG~eaaee~~   92 (396)
T 4dxd_A           13 GFNHLATLKVIGVGGGGNNAVNRMIDHGMNNVEFIAINTDGQALNLSKAESKIQIGEKLTRGLGAGANPEIGKKAAEESR   92 (396)
T ss_dssp             -----CCEEEEEEHHHHHHHHHHHHHHCCCSEEEEEEESCHHHHHTCCCSEEEECCHHHHTTSCCTTCHHHHHHHHHHTH
T ss_pred             ccCCCCeEEEEEECCcHHHHHHHHHHhCCCCceEEEEECCHHHHhcCCCccEEEcCccccCCCCCCCChHHHHHHHHHHH
Confidence            34457899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCEEEEeccCCCCccCChHHHHHHHHHHhCCceEEEEecCCCCchhhhHHHHHHHHHHHHhhCCEEEEEeC
Q 014946          134 EVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPN  213 (415)
Q Consensus       134 e~I~~~le~~D~~~I~agLGGGTGSG~apvia~~ake~g~~tvavvtlP~~~Eg~~r~~nA~~~l~~L~e~~D~viv~dN  213 (415)
                      |+|++++++||+|||+||||||||||++|+|+++++||++++|+|||.||.+||++|+|||.+++++|.+++|++|+|||
T Consensus        93 d~Ir~~le~~D~ffItagmGGGTGSGaapvIaeiake~g~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdN  172 (396)
T 4dxd_A           93 EQIEDAIQGADMVFVTSGMGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPN  172 (396)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEG
T ss_pred             HHHHHHHcCCCEEEEEeccCCCccccHHHHHHHHHHhcCCceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhccccCChHHHHhhhhhhhhccccccccccccCceeeechhhhhhhccCCCeeEEEeeecCCcchHHHHHHHHhc
Q 014946          214 DRLLDITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATL  293 (415)
Q Consensus       214 d~L~~~~~~~~~i~~af~~~N~~i~~~i~~It~~i~~~G~invD~~di~t~L~~~g~~~ig~G~a~g~~ra~~A~~~Al~  293 (415)
                      |+|+++|.+++++.++|..+|++|++.|++|++++++||.+|+||+|++++|++.|.++||+|++++++|+.+|+++|++
T Consensus       173 eaL~~I~~~~l~i~~af~~aN~ll~q~VsgIT~~irfpG~iNvDfaDv~t~m~~~G~A~mG~G~a~G~~ra~~A~~~Ai~  252 (396)
T 4dxd_A          173 DRLLDIVDKSTPMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAIS  252 (396)
T ss_dssp             GGGGGTCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCTBCCCHHHHHHHHTTCEECEEEEEEEESTTHHHHHHHHHHC
T ss_pred             HHHHHhhcccccHHHHHHHHHHHHHHHHHhhhhhhccCCcccCCHHHHHHHhhcCCeEEEEEEeccCCchHHHHHHHHHh
Confidence            99999998889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCccccccceEEeecCCCCCHHHHHHHHHHHHhhcCCCCcEEEEeeecCCCCCeEEEEEEEeCCCccc
Q 014946          294 APLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSF  366 (415)
Q Consensus       294 spll~~~i~~a~g~Lv~I~gg~disl~ev~~i~~~i~~~~~~~a~Ii~G~~~d~~l~~~i~VtvIatG~~~~~  366 (415)
                      +|||+.++++|+++|++|++++++++.|++++++.|++.++++++||||+.+|++++++++||||||||+.+.
T Consensus       253 sPLL~~~i~gAkgvLvnItgg~dl~l~Ev~~~~~~i~~~~~~~a~ii~G~~~d~~l~~~i~VtviaTG~~~~~  325 (396)
T 4dxd_A          253 SPLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQDAADEDVNMIFGTVINPELQDEIVVTVIATGFDDKP  325 (396)
T ss_dssp             CSSCSSCSTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHSSCCEEEEEEEECTTSTTEEEEEEEEECCCCC-
T ss_pred             CccccCChhhhcceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCCeEEEeeeeCCCCCCcEEEEEEEecCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997654
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1 Back     alignment and structure
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A* Back     alignment and structure
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1 Back     alignment and structure
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A* Back     alignment and structure
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A* Back     alignment and structure
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1 Back     alignment and structure
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1* Back     alignment and structure
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A* Back     alignment and structure
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C} Back     alignment and structure
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A* Back     alignment and structure
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii} Back     alignment and structure
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A* Back     alignment and structure
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A* Back     alignment and structure
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ... Back     alignment and structure
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ... Back     alignment and structure
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Back     alignment and structure
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Back     alignment and structure
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Back     alignment and structure
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Back     alignment and structure
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* Back     alignment and structure
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Back     alignment and structure
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Back     alignment and structure
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Back     alignment and structure
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* Back     alignment and structure
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Back     alignment and structure
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Back     alignment and structure
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A* Back     alignment and structure
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Back     alignment and structure
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Back     alignment and structure
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* Back     alignment and structure
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} Back     alignment and structure
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Back     alignment and structure
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Back     alignment and structure
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Back     alignment and structure
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Back     alignment and structure
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} Back     alignment and structure
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Back     alignment and structure
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium} Back     alignment and structure
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} Back     alignment and structure
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Back     alignment and structure
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Back     alignment and structure
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} Back     alignment and structure
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Back     alignment and structure
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 415
d1ofua1198 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Ps 1e-83
d1rq2a1198 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Myc 9e-81
d2vapa1209 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Ar 8e-75
d1w5fa1194 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Th 1e-70
d1w5fa2121 d.79.2.1 (A:216-336) Cell-division protein FtsZ {T 2e-36
d2vapa2123 d.79.2.1 (A:232-354) Cell-division protein FtsZ {A 2e-34
d1rq2a2107 d.79.2.1 (A:206-312) Cell-division protein FtsZ {M 3e-34
d1ofua2109 d.79.2.1 (A:209-317) Cell-division protein FtsZ {P 7e-33
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} Length = 198 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  252 bits (645), Expect = 1e-83
 Identities = 113/198 (57%), Positives = 143/198 (72%)

Query: 58  TAKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLG 117
           TA IKV+GVGGGG NAVN M  + ++GV+F   NTD+QAL   AA   LQ+G  +T+GLG
Sbjct: 1   TAVIKVIGVGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLG 60

Query: 118 TGGNPLLGEQAAEESKEVIANALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVG 177
            G NP +G QAA E +E I+  L+G+D+VFIT GMGGGTG+GAAP++A++AKE G LTV 
Sbjct: 61  AGANPEVGRQAALEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVA 120

Query: 178 VVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLDITDEQTALQDAFLLADDVL 237
           VVT PF FEGRKR   A E I  L ++VD+LI IPN++LL I  +  +L  AF  ADDVL
Sbjct: 121 VVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFAKADDVL 180

Query: 238 RQGVQGISDIITIPGLVN 255
              V+GISDII  PG++N
Sbjct: 181 AGAVRGISDIIKRPGMIN 198
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} Length = 198 Back     information, alignment and structure
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 209 Back     information, alignment and structure
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} Length = 194 Back     information, alignment and structure
>d1w5fa2 d.79.2.1 (A:216-336) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} Length = 121 Back     information, alignment and structure
>d2vapa2 d.79.2.1 (A:232-354) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 123 Back     information, alignment and structure
>d1rq2a2 d.79.2.1 (A:206-312) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} Length = 107 Back     information, alignment and structure
>d1ofua2 d.79.2.1 (A:209-317) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} Length = 109 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query415
d1rq2a1198 Cell-division protein FtsZ {Mycobacterium tubercul 100.0
d1w5fa1194 Cell-division protein FtsZ {Thermotoga maritima [T 100.0
d1ofua1198 Cell-division protein FtsZ {Pseudomonas aeruginosa 100.0
d2vapa1209 Cell-division protein FtsZ {Archaeon Methanococcus 100.0
d2btoa1244 Tubulin alpha-subunit {Prosthecobacter dejongeii [ 99.94
d1tubb1243 Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 982 99.94
d2vapa2123 Cell-division protein FtsZ {Archaeon Methanococcus 99.93
d1tuba1245 Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 98 99.93
d1w5fa2121 Cell-division protein FtsZ {Thermotoga maritima [T 99.92
d1rq2a2107 Cell-division protein FtsZ {Mycobacterium tubercul 99.91
d1ofua2109 Cell-division protein FtsZ {Pseudomonas aeruginosa 99.9
d1tubb2184 Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 982 97.7
d1tuba2195 Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 98 97.48
d2btoa2180 Tubulin alpha-subunit {Prosthecobacter dejongeii [ 97.13
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 95.72
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 95.62
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 95.48
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 95.45
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 95.41
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 95.29
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 94.88
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 94.36
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 94.19
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 94.13
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 93.88
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 93.63
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 93.49
d2cmda1145 Malate dehydrogenase {Escherichia coli [TaxId: 562 93.3
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 93.07
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 93.04
d2q46a1252 Hypothetical protein At5g02240 (T7H20_290) {Thale 92.95
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 92.69
d1hyea1145 MJ0490, lactate/malate dehydrogenase {Archaeon Met 92.54
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 91.87
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 91.62
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 91.46
d1o6za1142 Malate dehydrogenase {Archaeon Haloarcula marismor 91.46
d1up7a1162 6-phospho-beta-glucosidase {Thermotoga maritima [T 90.77
d1jw9b_247 Molybdenum cofactor biosynthesis protein MoeB {Esc 90.71
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 89.94
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 89.8
d2ahra2152 Pyrroline-5-carboxylate reductase ProC {Streptococ 89.59
d1u8xx1167 Maltose-6'-phosphate glucosidase GlvA {Bacillus su 89.53
d1s6ya1169 6-phospho-beta-glucosidase {Bacillus stearothermop 89.2
d1mlda1144 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 88.81
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 88.44
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 87.89
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 87.81
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 87.43
d1pgja2178 6-phosphogluconate dehydrogenase {Trypanosoma bruc 87.24
d2c5aa1363 GDP-mannose-3', 5'-epimerase {Thale cress (Arabido 86.68
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 85.34
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 83.34
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 83.25
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 82.86
d1xgka_350 Negative transcriptional regulator NmrA {Aspergill 82.26
d1yqga2152 Pyrroline-5-carboxylate reductase ProC {Neisseria 82.05
d1yovb1426 UBA3 {Human (Homo sapiens) [TaxId: 9606]} 81.98
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 81.91
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 80.92
d1gsoa2105 Glycinamide ribonucleotide synthetase (GAR-syn), N 80.25
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.7e-55  Score=404.13  Aligned_cols=197  Identities=62%  Similarity=0.964  Sum_probs=188.9

Q ss_pred             CeEEEEeeCcchHHHHHHHHHcCCCceEEEEEECCHHHHhcCCCCCCeeccccccccCCCCCCchhhHHHHHHHHHHHHH
Q 014946           59 AKIKVVGVGGGGNNAVNRMIGSGLQGVDFYAINTDSQALLQSAAENPLQIGDLLTRGLGTGGNPLLGEQAAEESKEVIAN  138 (415)
Q Consensus        59 ~~i~vIGvGgaG~niv~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~G~GaG~n~~~G~~~aee~~e~I~~  138 (415)
                      .+|+||||||||||+|++|++.++.+++|+++|||.++|..+++++|+++|+..|+|+|+|+||++|+++++++.++|++
T Consensus         2 a~IkViGvGGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~~   81 (198)
T d1rq2a1           2 AVIKVVGIGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEE   81 (198)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHHH
T ss_pred             CeEEEEEeCchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCEEEEeccCCCCccCChHHHHHHHHHHhCCceEEEEecCCCCchhhhHHHHHHHHHHHHhhCCEEEEEeCchhhh
Q 014946          139 ALKGSDLVFITAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSSQALEAIERLQKNVDTLIVIPNDRLLD  218 (415)
Q Consensus       139 ~le~~D~~~I~agLGGGTGSG~apvia~~ake~g~~tvavvtlP~~~Eg~~r~~nA~~~l~~L~e~~D~viv~dNd~L~~  218 (415)
                      +++++|++||+||||||||||++|+||+++||+++++++|||+||.|||.+|..+|.++|++|++++|++|+||||+|++
T Consensus        82 ~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g~l~v~ivt~PF~~EG~~r~~~A~~gl~~L~~~~D~~Ivi~Nd~L~~  161 (198)
T d1rq2a1          82 LLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQ  161 (198)
T ss_dssp             HHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTT
T ss_pred             HhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcCCcEEEEEecChHHHHHHHHHHHHHHHHHHHHhhCeEEEechhhHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCChHHHHhhhhhhhhccccccccccccCceee
Q 014946          219 ITDEQTALQDAFLLADDVLRQGVQGISDIITIPGLVN  255 (415)
Q Consensus       219 ~~~~~~~i~~af~~~N~~i~~~i~~It~~i~~~G~in  255 (415)
                      ..++++++.++|+.+|++|.++|++|+++++.||++|
T Consensus       162 ~~~~~~~~~~af~~ad~~l~~~i~~I~~li~~~g~iN  198 (198)
T d1rq2a1         162 MGDAAVSLMDAFRSADEVLLNGVQGITDLITTPGLIN  198 (198)
T ss_dssp             SSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSBCSSC
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9888999999999999999999999999999999887
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]} Back     information, alignment and structure
>d1tubb1 c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2vapa2 d.79.2.1 (A:232-354) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1tuba1 c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w5fa2 d.79.2.1 (A:216-336) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rq2a2 d.79.2.1 (A:206-312) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ofua2 d.79.2.1 (A:209-317) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1tubb2 d.79.2.1 (B:246-437) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1tuba2 d.79.2.1 (A:246-440) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2btoa2 d.79.2.1 (A:253-432) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Back     information, alignment and structure
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure