Citrus Sinensis ID: 014981

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
Protein Sequence
MDDIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccEEEEccccccccEEEccccccccEEEEEccHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHccccccccEEEEccHHHHHccHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHcccEEEEccccccEEEEEcccEEEccEEEEcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHcccEEEccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MDDIKMLADSVRskfetlhplsngcciyrvpqgwrclhpndytpkmvsigplhhgnEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAetiafnsddfATMIFVDAIFLLEFFLRGFLrdfitsddriygkprLIDQLIGDLWLLENQLPLFILNELFDlaktatygdyyeglSLFRISRWfwrsgfpnlpidkdllDTKFseakhfldlprlclqppqspaqigfrgqkmpgamelhqtgvkfnvgtsknpfditfdkgivkipfvtiydnTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLahtpedgkLLIQNgivglgnseRLSNFFLSLIkecpmgtrfgyTNLVEDLQSyckspwhswkanlrqnyfntpwasiSVAGAVILLVLTLIQTACSVIGL
Flexible Loop (DISEMBL)
MDDIKMLADSVRSkfetlhplsngccIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPfditfdkgivkiPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Low Complexity Region (SEG)
MDDIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIfllefflrgflrdfITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Disordered region (IsUnstruct)
**************FETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQ*******************ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVI**
Disordered Region (DISOPRED)
*D**KMLAD*************NGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Disordered Region (DISEMBL)
MDDIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Disordered Region (DISPRO)
*DDIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSP*QIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDDIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	415	2.2.26 [Sep-21-2011]
Q9SD53	476	UPF0481 protein At3g47200	no	no	0.903	0.787	0.272	3e-35
P0C897	529	Putative UPF0481 protein	no	no	0.448	0.351	0.305	3e-15

>sp|Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1

 Score =  149 bits (377), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 201/429 (46%), Gaps = 54/429 (12%)

Query: 24  GCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFL---QRTNVS 80
            CCI+RVP+ +  L+P  Y PK+VSIGP H+G + L+ +++HK R L+ FL   ++ +V 
Sbjct: 45  SCCIFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKKKDVE 104

Query: 81  IEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRI 140
               +  +   E ++R  Y+E +     D   M+ +D  F+L  FL     +   S+D I
Sbjct: 105 ENVLVKAVVDLEDKIRKSYSEELK-TGHDLMFMMVLDGCFILMVFLI-MSGNIELSEDPI 162

Query: 141 YGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFP 200
           +  P L+  +  DL LLENQ+P F+L  L+  +K     D      L RI+  F+++   
Sbjct: 163 FSIPWLLSSIQSDLLLLENQVPFFVLQTLYVGSKIGVSSD------LNRIAFHFFKN--- 213

Query: 201 NLPIDKD---LLDTKFSEAKHFLDLPRLCLQP----------PQSPAQI---------GF 238
             PIDK+       +  +AKH LDL R    P          P    Q+           
Sbjct: 214 --PIDKEGSYWEKHRNYKAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGKSGNVPSV 271

Query: 239 RGQKMP---GAMELHQTGVKFNVGTSKNP--FDITFDKGIVKIPFVTIYDNTEKFYRNVL 293
             + +P    A  L   G+KF +  SK     ++   K  ++IP +        F+ N +
Sbjct: 272 DSKAVPLILSAKRLRLQGIKFRLRRSKEDSILNVRLKKNKLQIPQLRFDGFISSFFLNCV 331

Query: 294 AFERMH-GYTRYLNDYIIIMSYLAHTPED------GKLLIQNGIVGLGNSERLSNFFLSL 346
           AFE+ +   +  +  YI+ M  L +  ED       KL+I+N     G++  +S FF ++
Sbjct: 332 AFEQFYTDSSNEITTYIVFMGCLLNNEEDVTFLRNDKLIIEN---HFGSNNEVSEFFKTI 388

Query: 347 IKECPMGTRFGY-TNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTL 405
            K+        Y  N+ + +  Y K  ++   A  R  +F +PW  +S    + +++LT+
Sbjct: 389 SKDVVFEVDTSYLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTM 448

Query: 406 IQTACSVIG 414
           +Q+  +++ 
Sbjct: 449 LQSTVAILS 457

Arabidopsis thaliana (taxid: 3702)

>sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)

Query: 25  CCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTN-VSIEY 83
             I+ VP+   C HP+ YTP  VSIGP H    EL  ME +KL   R    + N      
Sbjct: 43  VSIFNVPKALMCSHPDSYTPHRVSIGPYHCLKPELHEMERYKLMIARKIRNQYNSFRFHD 102

Query: 84  FLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGK 143
            +  ++  E ++R CY + I FN +    ++ VD+ FL+EF      R   T  +R+   
Sbjct: 103 LVEKLQSMEIKIRACYHKYIGFNGETLLWIMAVDSSFLIEFLKIYSFRKVETLINRVGH- 161

Query: 144 PRLIDQLIGDLWLLENQLPLFILNEL--FDLAKTATYGDYYEGLSLFRISRWFWRSGFPN 201
               ++++ D+ ++ENQ+PLF+L +   F L  T +  D      L  +     +   P 
Sbjct: 162 ----NEILRDIMMIENQIPLFVLRKTLEFQLESTESADDL-----LLSVLTGLCKDLSP- 211

Query: 202 LPI---DKDLLDTKFSEAKHFLD 221
           L I   D  +L  +F E  H LD
Sbjct: 212 LVIKFDDDQILKAQFQECNHILD 234

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
255544798	410	conserved hypothetical protein [Ricinus	0.971	0.982	0.453	2e-97
224143104	410	predicted protein [Populus trichocarpa]	0.975	0.987	0.446	3e-95
255569108	421	conserved hypothetical protein [Ricinus	0.959	0.945	0.448	4e-91
255548976	439	conserved hypothetical protein [Ricinus	0.971	0.917	0.410	1e-88
255544800	437	conserved hypothetical protein [Ricinus	0.985	0.935	0.430	3e-88
224075748	436	predicted protein [Populus trichocarpa]	0.983	0.935	0.430	6e-86
224075744	436	predicted protein [Populus trichocarpa]	0.983	0.935	0.419	2e-85
224053372	434	predicted protein [Populus trichocarpa]	0.966	0.923	0.409	2e-82
118486674	434	unknown [Populus trichocarpa]	0.966	0.923	0.407	8e-82
224075760	420	predicted protein [Populus trichocarpa]	0.980	0.969	0.406	2e-81

>gi|255544798|ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis] gi|223547368|gb|EEF48863.1| conserved hypothetical protein [Ricinus communis]

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 186/410 (45%), Positives = 267/410 (65%), Gaps = 7/410 (1%)

Query: 10  SVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRY 69
           SVR++ E LH LS+ CCI+RVP+  R L+   YTP+ VSIG LHHG +ELKAMEEHK RY
Sbjct: 2   SVRNELEVLHSLSDDCCIHRVPKRLRQLNEKAYTPRAVSIGALHHGKQELKAMEEHKRRY 61

Query: 70  LRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGF 129
           LR FL+ +  S+E  +  IK  E  LRNCY+ETI  NS++F  MI +DA F++   L+  
Sbjct: 62  LRDFLEWSKASVEDCIKLIKDNEIRLRNCYSETIGLNSENFVKMILLDAAFIIMVLLKQC 121

Query: 130 LRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFR 189
           L++F +  DRI+ KP +I  +  D+ LLENQ+P FIL++LF   K +T  + +E LS+  
Sbjct: 122 LKEFRSKKDRIFSKPGMIGDVRFDILLLENQIPFFILDDLF---KLSTNSEGHEELSMIV 178

Query: 190 ISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAMEL 249
           ++  F+   F +      L +  FS+ +H +D  R+C QPP+   +   +   +P   EL
Sbjct: 179 LTHKFFTDTFDSWVAKHILDEHDFSKIEHMVDFLRVCQQPPKLQNRKKLKKLIIPSVTEL 238

Query: 250 HQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFER-MHGYTRYLNDY 308
           HQ GVKF +G+S+   +I F++GI+K+P + I DNTE   RN+ AFE+ +     Y++DY
Sbjct: 239 HQAGVKFELGSSRKLLNIKFNRGILKVPSLQIDDNTEILLRNLQAFEQCLCDRGNYVSDY 298

Query: 309 IIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKE-CPMGTRFGYTNLVEDL 365
           I ++S L   P+D  LL QNGI+   L NSE +S  F  L +E   +   F +++LVE+L
Sbjct: 299 ISLVSLLVKAPKDVDLLAQNGIIENWLVNSEGVSTLFQKLEQENLLIPDDFYFSSLVEEL 358

Query: 366 QSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL 415
            SYCK+PW+ WKA L+Q+YFNTPWA ISV  A ILL+LT+IQ+ CS++ +
Sbjct: 359 NSYCKNPWNKWKATLKQDYFNTPWAVISVIAAAILLILTVIQSVCSILQV 408

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143104|ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (910), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 183/410 (44%), Positives = 264/410 (64%), Gaps = 5/410 (1%)

Query: 11  VRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYL 70
           +R + ++L  LS+ CCIY VP+    L+   YTP++VSIGPLHHG  EL+ MEEHK RYL
Sbjct: 1   MRGELDSLPVLSSKCCIYTVPKRLHHLNEKAYTPQLVSIGPLHHGKPELRPMEEHKKRYL 60

Query: 71  RCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFL 130
           + FLQRT +S+  +L  I+  E +LR+CYAETI F+SD+F  MI VDA F++E  LR   
Sbjct: 61  QDFLQRTKLSLVDYLKVIEKNEKKLRDCYAETIEFSSDEFIKMILVDAAFIIEVLLRYHF 120

Query: 131 RDFITS--DDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLF 188
           +       +DR+Y KP  I  +  D+WLLENQLP FIL +LFD A+        + LS+ 
Sbjct: 121 KPMRKEKENDRVYNKPWAIQDIRKDMWLLENQLPFFILEDLFDPARITLPSGSNQMLSIT 180

Query: 189 RISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKMPGAME 248
           +++  F +  +    +++     K  + +H +D   +C QPPQS ++   +   +P A E
Sbjct: 181 KLAYEFSKDLWDLEEMEEKSQKNKSPKVQHLVDFLWICHQPPQSKSKKKLKTLGIPSATE 240

Query: 249 LHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRYLNDY 308
           LHQ GVKF +G+SKN FDI F  GI++IP + I   TE  +RN+LAFE+ H    Y+NDY
Sbjct: 241 LHQAGVKFKLGSSKNLFDIKFKNGILEIPRLEIVGATELLFRNLLAFEQCHCSKNYINDY 300

Query: 309 IIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKEC-PMGTRFGYTNLVEDL 365
           +II+++L +T +D +LL+++GIV   L + E +S  F  L+KE   +   F ++ LVE+L
Sbjct: 301 VIIINHLVNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSGLVEEL 360

Query: 366 QSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL 415
            +YC+ PWH W+A L+Q+YFN PW+ IS   AVILLVLT IQ  CS++ +
Sbjct: 361 NAYCRKPWHKWQATLKQHYFNNPWSIISFIAAVILLVLTTIQAVCSILSV 410

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569108|ref|XP_002525523.1| conserved hypothetical protein [Ricinus communis] gi|223535202|gb|EEF36881.1| conserved hypothetical protein [Ricinus communis]

 Score =  341 bits (875), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 190/424 (44%), Positives = 255/424 (60%), Gaps = 26/424 (6%)

Query: 3   DIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           DIK LA SVR +   L PLS+ CCIY+VP+  R L+P  YTP+ VS+GPLHHG +EL+ M
Sbjct: 8   DIKELAKSVRQELGVLGPLSDKCCIYKVPERSRKLNPEAYTPRAVSVGPLHHGKQELRVM 67

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLL 122
           EEHK RYL  FLQ ++ S+E F+T I  +E  LRNCYAETI F+S +F  MI +DA FL+
Sbjct: 68  EEHKRRYLFDFLQWSDSSLEDFITCIGKQETRLRNCYAETIVFSSQEFVKMILIDATFLV 127

Query: 123 EFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYY 182
            F L+       + +DRI     + D +  D+ LLENQ+P FIL +LF L+  A   +  
Sbjct: 128 TFLLKVHFAHLRSRNDRISRNDNMFD-ISRDIILLENQVPFFILEDLFKLSNLA---ERV 183

Query: 183 EGLSLFRI--------SRW-FWRSGFPNLPIDKDLLDTK-FSEAKHFLDLPRLCLQPPQS 232
           EGLSL  I         RW  W +G        D+L+ + FSE +HFLD  R+C QPP+ 
Sbjct: 184 EGLSLSMIGLTHSFFQGRWGSWVTG--------DILEQQDFSEVEHFLDFLRICQQPPKL 235

Query: 233 PAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNV 292
                     +P   +LH  GVKF +  S+N   I FDKGI+KIP   I D  E   RN+
Sbjct: 236 KPPRKLEKIVLPTVTQLHDAGVKFELSPSQNKLSIAFDKGILKIPHFRIEDTVEVLLRNL 295

Query: 293 LAFERMH-GYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKE 349
            AFE  H     Y NDYI ++  L    +D ++L QNGI+   +GN++ ++  F + ++ 
Sbjct: 296 QAFEECHCSGEMYANDYIAMIGMLIKDAKDVEILDQNGIIENWIGNNQAVATLF-ARMEV 354

Query: 350 CPMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTA 409
                +F +   ++DL  YCK+PWH  K +LRQ+YFNTPWA ISV  A ILLVLT+IQT 
Sbjct: 355 AIRRNQFYFAATLQDLNDYCKNPWHKMKGSLRQDYFNTPWAGISVFAASILLVLTVIQTV 414

Query: 410 CSVI 413
           CS++
Sbjct: 415 CSIL 418

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548976|ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis] gi|223545488|gb|EEF46993.1| conserved hypothetical protein [Ricinus communis]

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 172/419 (41%), Positives = 258/419 (61%), Gaps = 16/419 (3%)

Query: 6   MLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEH 65
           +L  S++S+ E L P+S+  CIYRVP+  R ++ N YTP++VSIGP HHG   LKAMEEH
Sbjct: 22  LLLTSMKSRLENLSPVSSERCIYRVPKRIRDVNHNAYTPRLVSIGPFHHGKPGLKAMEEH 81

Query: 66  KLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFF 125
           K R+L+ FL++T V ++  + FIK +E   RNCYAETIA  SD+F  ++ VDA F ++  
Sbjct: 82  KWRHLQNFLRQTRVKLDDLVKFIKDREERARNCYAETIALTSDEFVQILIVDATFTIDIL 141

Query: 126 LRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGL 185
           L   +     + + +Y +  L+  +  D+ L+ENQLP FIL ++ D AK+       +  
Sbjct: 142 LGKVIPQLTCAIECVYDRSSLMFDIYRDMLLIENQLPYFILGDILDFAKSIAASGSSQWP 201

Query: 186 SLFRISRWFWRS----GFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQP--PQSPAQIGFR 239
           S+  ++R ++ S    G  + P+ +       SE  HF+D  RLC QP  P+   +   +
Sbjct: 202 SILELTRVYFNSYMQLGRASHPMRR-------SEVNHFVDFLRLCHQPIKPRQTPRENRK 254

Query: 240 GQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH 299
            +    + EL + GVKF V ++ +  DI F+ G+++IP++ + + TE F+RN++AFE+ H
Sbjct: 255 FEMTRSSTELREAGVKFKVASTTHLLDIQFNDGVLEIPYIRVSEITEAFFRNLIAFEQCH 314

Query: 300 GYTRYLNDYIIIMSYLAHTPEDGKLLIQNGI--VGLGNSERLSNFFLSLIKECPMGTR-F 356
            +T Y++DYI+IM  L +TP D ++L++ GI  V L N+   S  F +L KE    +  F
Sbjct: 315 CHTSYISDYIVIMDSLINTPHDVEVLVKYGIMKVMLANNVEASTLFNNLAKEILYDSHVF 374

Query: 357 GYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL 415
            Y+ L EDL ++CK  WH WKA L+ NYFNTPW +ISV   VILLVLT IQ  CS+I +
Sbjct: 375 YYSLLCEDLNTFCKVRWHRWKATLKHNYFNTPWTAISVIAGVILLVLTFIQAVCSIIQV 433

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544800|ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis] gi|223547369|gb|EEF48864.1| conserved hypothetical protein [Ricinus communis]

 Score =  331 bits (849), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 180/418 (43%), Positives = 251/418 (60%), Gaps = 9/418 (2%)

Query: 3   DIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           DI  L +S++ + E L PLS+ CCIYRVPQ  R ++   YTP++VSIGP HHG  ELKAM
Sbjct: 22  DINELVESIKREIEILDPLSDECCIYRVPQQLREINEKAYTPRVVSIGPYHHGKNELKAM 81

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLL 122
           EE+K RYL  FL+R+ +  + F+T I+  E  LRN YAETI  +  DF  M+ VD  FL+
Sbjct: 82  EEYKRRYLVDFLERSEIMFDIFITGIQEMEKRLRNSYAETIRHSRKDFVKMMAVDGAFLI 141

Query: 123 EFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYY 182
           E+ L+ +LRD+ +S DRI+ K +L   L  DL +LENQLP F L  LF L   +    + 
Sbjct: 142 EYLLKWYLRDW-SSSDRIFNKQQLGHMLCFDLIMLENQLPFFFLEHLFKLTNASK---FV 197

Query: 183 EGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLC-LQPPQSPAQIGFRGQ 241
           EGLS+ ++   F  +      +    L       +H +D   +C LQP +  A+   R  
Sbjct: 198 EGLSIVKLVNIFLINMTEQNWLSSHYLVHGNIAVQHLVDFVAICFLQPSKPNAKRKCRSL 257

Query: 242 KMPGAMELHQTGVKFNVGTSKNPFDITFDK--GIVKIPFVTIYDNTEKFYRNVLAFERMH 299
             P   +LH+ G KF   TS+   DI FDK  G+++IP   + D TE F RN+ AFE+ H
Sbjct: 258 TTPTISKLHRAGAKFKSSTSRCLLDIKFDKKRGVLEIPQFKVTDYTEIFSRNIQAFEQCH 317

Query: 300 GYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFG 357
               Y NDY  IM  L   PED  LL+Q+GI+   L +++  + FF ++ K   +   F 
Sbjct: 318 NRVNYANDYFSIMDLLVDVPEDVDLLVQSGIIENWLEDNQAAATFFNNMGKHNLIYDDFY 377

Query: 358 YTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL 415
           ++ LV DL +YC++PWH+WKA+L+Q YFN PW  ISVA A  LL+LT+IQT CS++ +
Sbjct: 378 FSGLVGDLNAYCRTPWHNWKASLKQKYFNNPWTMISVAAAGFLLLLTIIQTVCSILQV 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075748|ref|XP_002304749.1| predicted protein [Populus trichocarpa] gi|222842181|gb|EEE79728.1| predicted protein [Populus trichocarpa]

 Score =  324 bits (830), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 179/416 (43%), Positives = 257/416 (61%), Gaps = 8/416 (1%)

Query: 3   DIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           DI+ LA SV+++ E  +  S+ CCIY+VP+  R ++   YTP++VSIGP+HH  E+LKAM
Sbjct: 21  DIETLAKSVKAELEISYAFSDTCCIYKVPEQLREVNEKAYTPRLVSIGPIHHAKEKLKAM 80

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLL 122
           E+HK  YL+ FL R+ VS+E F+ FIK  E  LRNCYAETI FNS+ F  MI +DA F++
Sbjct: 81  EDHKRMYLKEFLARSEVSVEGFIEFIKENETRLRNCYAETIEFNSEYFIKMILMDAAFVI 140

Query: 123 EFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYY 182
            F L+   +DF  S D I+  P     +  D+ LLENQLP FIL EL  L   +T     
Sbjct: 141 MFLLKCKNKDFSGSRDSIFYPPHKSVDVRVDICLLENQLPFFILEELCGL---STILGNS 197

Query: 183 EGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQK 242
              +L  ++  F+   + +  + +      FSE KH +D   +  QPPQ           
Sbjct: 198 PKPTLIELTHGFFSKEWGSWAVGEYWGKIDFSEVKHLVDFLTIYQQPPQQQQNEELEVLT 257

Query: 243 MPGAMELHQTGVKFNVGTSKNPFDITFD--KGIVKIPFVTIYDNTEKFYRNVLAFERMHG 300
            P   ELHQ GVKF + +SKN  DI FD  KG ++IP + + D+TE   RN+ AFE+ HG
Sbjct: 258 APSVKELHQAGVKFVLSSSKNLLDIKFDRNKGRLEIPRLQLDDSTEIIIRNMQAFEQCHG 317

Query: 301 YTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFG- 357
              Y+ DYI +M       +D ++L++N I+   L ++E +   F +L K+  +  RF  
Sbjct: 318 LYGYVGDYIFLMGLFVSASKDVEMLVENRIIENWLPSNEEVVQLFYNLNKQNSVRGRFFL 377

Query: 358 YTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVI 413
           +  L++DL ++C+ PW+ WKANL+QNYFNTPWA+ISV+GAVILL+LT++Q+ CS++
Sbjct: 378 FKGLIKDLNAFCEKPWNKWKANLKQNYFNTPWAAISVSGAVILLILTVLQSVCSIL 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075744|ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|222842179|gb|EEE79726.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (825), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 175/417 (41%), Positives = 257/417 (61%), Gaps = 9/417 (2%)

Query: 3   DIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           DI  LA SV  + E  +P S+ CCIY+VP+  R L+   YTP++VSIGP+HHGN++LKAM
Sbjct: 20  DIDRLAQSVTEELEISNPFSDTCCIYKVPERLRELNEKAYTPRLVSIGPIHHGNDKLKAM 79

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLL 122
           E+HK  YL+ F+ RT VS++ F+  IK KE  LRNCYAET  F+S+ F  MI +DA F++
Sbjct: 80  EDHKRMYLKEFIARTKVSVKGFIELIKEKETRLRNCYAETNGFSSEYFIKMILMDAAFVI 139

Query: 123 EFFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYY 182
              L+    DF  S D I+  P     +  D+ LLENQLP FIL EL  L  +  +G+  
Sbjct: 140 MLLLKWTYTDFRGSRDSIFYPPYKSVDVRVDICLLENQLPFFILEELCGL--SPIFGNSP 197

Query: 183 EGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQK 242
           +  +L  ++ WF+   + +  + + L    FSE KH +D   +  +P +           
Sbjct: 198 KA-TLIGLTHWFFSYEWGSWAVGEYLGGVDFSEVKHLVDFLTIYHRPTEQQQYEELEVLT 256

Query: 243 MPGAMELHQTGVKFNVGTSKNPFDITFD--KGIVKIPFVTIYDNTEKFYRNVLAFERMHG 300
            P   ELHQ GVKF + +SK+  DI FD  KG ++ P + + D TE   RN+ AFE+ HG
Sbjct: 257 APSVKELHQAGVKFVLSSSKHLLDIKFDRNKGRLEFPRLQLDDRTEIIIRNMQAFEQCHG 316

Query: 301 YTR-YLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGT-RF 356
            T  Y+ DYI +M       +D ++L++N I+   L ++E +   F +L K+  + +  F
Sbjct: 317 LTHGYVGDYIFLMGLFVSASKDVEMLVENRIIENWLPSNEEVVQLFYNLNKQNSVWSGTF 376

Query: 357 GYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVI 413
            +  L++DL ++C+ PW+ WKANL+QNYFNTPWA++SV+GAVILL+LT+IQ+ CS++
Sbjct: 377 LFKGLIKDLNAFCERPWNKWKANLKQNYFNTPWAAVSVSGAVILLILTVIQSVCSIL 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053372|ref|XP_002297787.1| predicted protein [Populus trichocarpa] gi|222845045|gb|EEE82592.1| predicted protein [Populus trichocarpa]

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/420 (40%), Positives = 255/420 (60%), Gaps = 19/420 (4%)

Query: 3   DIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           DI  L  SV+ + +TLH  SN C IYRVP+  R      YTP++VSIGP+HHG EELK M
Sbjct: 20  DIDKLTASVQEELKTLHAFSNTCSIYRVPKRLRDSKEYAYTPQLVSIGPIHHGKEELKEM 79

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIA-FNSDDFATMIFVDAIFL 121
           EEHK  YL+ FL+ + VS++  +  +  KE  LRNCYA+     +++DF  M+ +D+ F+
Sbjct: 80  EEHKKIYLQEFLKLSEVSVKECIAAVAEKETSLRNCYADNFENISTEDFVKMMLLDSSFI 139

Query: 122 LEFFLRGFLRDFITSD-DRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGD 180
           +  FL  F   FI S+ DRI+GKP +I  +  D+ LLENQ+P FIL++L  L++      
Sbjct: 140 IMVFLIQF-GSFIPSNYDRIFGKPWMIRGIDFDMCLLENQIPFFILDDLLKLSRRQG--- 195

Query: 181 YYEGLSLFRISRWFWRSGFPNLPIDKDLLDT-KFSEAKHFLDLPRLCLQPPQSPAQIGFR 239
              G S+ +++R F  S F +  + KD+L+    SE +HF+D  R C +P +   Q    
Sbjct: 196 ---GCSMIKLTRDFLSSTFGDSWVPKDILEQINSSEVEHFVDFLRKCQRPAKRTQQQPLE 252

Query: 240 GQKMPGAMELHQTGVKFNVGTSKNPFDITFD--KGIVKIPFVTIYDNTEKFYRNVLAFER 297
            +  P  MELHQ+GVKF +G+ +  FD+ FD  KGI++IP + + D TEK +RN+ AFE+
Sbjct: 253 SRTTPSVMELHQSGVKFKLGSKEKIFDMNFDFHKGILEIPPLFLEDETEKLFRNLHAFEQ 312

Query: 298 MHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGT--- 354
            H    Y++DYI  +++L     D ++L + GI+    S+  ++  +S++ +   G    
Sbjct: 313 CHCRDVYVSDYIATINFLVRDTNDVEILAKKGIIDYWLSD--NDAVMSVLHDLDRGNLVN 370

Query: 355 --RFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412
             +F + ++VEDL  YC+   H W A L+ NYF+ PW SISV  A  LL+LT+IQT CSV
Sbjct: 371 SKQFYFADVVEDLNKYCRKRTHKWIAALKHNYFHNPWVSISVVAAGALLILTVIQTVCSV 430

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486674|gb|ABK95174.1| unknown [Populus trichocarpa]

 Score =  310 bits (794), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 171/420 (40%), Positives = 254/420 (60%), Gaps = 19/420 (4%)

Query: 3   DIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           DI  L  SV+ + +TLH  SN C IYRVP+  R      Y P++VSIGP+HHG EELK M
Sbjct: 20  DIDKLTASVQEELKTLHAFSNTCSIYRVPKRLRDSKEYAYKPQLVSIGPIHHGKEELKEM 79

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIA-FNSDDFATMIFVDAIFL 121
           EEHK  YL+ FL+ + VS++  +  +  KE  LRNCYA+     +++DF  M+ +D+ F+
Sbjct: 80  EEHKKIYLQEFLKLSEVSVKECIAAVAEKETSLRNCYADNFENISTEDFVKMMLLDSSFI 139

Query: 122 LEFFLRGFLRDFITSD-DRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGD 180
           +  FL  F   FI S+ DRI+GKP +I  +  D+ LLENQ+P FIL++L  L++      
Sbjct: 140 IMVFLIQF-GSFIPSNYDRIFGKPWMIRGIDFDMCLLENQIPFFILDDLLKLSRRQG--- 195

Query: 181 YYEGLSLFRISRWFWRSGFPNLPIDKDLLDT-KFSEAKHFLDLPRLCLQPPQSPAQIGFR 239
              G S+ +++R F  S F +  + KD+L+    SE +HF+D  R C +P +   Q    
Sbjct: 196 ---GCSMIKLTRDFLSSTFGDSWVPKDILEQINSSEVEHFVDFLRKCQRPAKRTQQQPLE 252

Query: 240 GQKMPGAMELHQTGVKFNVGTSKNPFDITFD--KGIVKIPFVTIYDNTEKFYRNVLAFER 297
            +  P  MELHQ+GVKF +G+ +  FD+ FD  KGI++IP + + D TEK +RN+ AFE+
Sbjct: 253 SRTTPSVMELHQSGVKFKLGSKEKIFDMNFDFHKGILEIPPLFLEDETEKLFRNLHAFEQ 312

Query: 298 MHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVGLGNSERLSNFFLSLIKECPMGT--- 354
            H    Y++DYI  +++L     D ++L + GI+    S+  ++  +S++ +   G    
Sbjct: 313 CHCRDVYVSDYIATINFLVRDTNDVEILAKKGIIDYWLSD--NDAVMSVLHDLDRGNLVN 370

Query: 355 --RFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412
             +F + ++VEDL  YC+   H W A L+ NYF+ PW SISV  A  LL+LT+IQT CSV
Sbjct: 371 SKQFYFADVVEDLNKYCRKRTHKWIAALKHNYFHNPWVSISVVAAGALLILTVIQTVCSV 430

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075760|ref|XP_002304755.1| predicted protein [Populus trichocarpa] gi|222842187|gb|EEE79734.1| predicted protein [Populus trichocarpa]

 Score =  309 bits (791), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 169/416 (40%), Positives = 252/416 (60%), Gaps = 9/416 (2%)

Query: 4   IKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAME 63
           I  L  SV+ + +  +  S+ CCIY+VP+  R L+   YTP++VSIGP+HH N++LKAME
Sbjct: 5   IDKLIQSVKEELQISYAFSDTCCIYKVPERLRELNEKAYTPRLVSIGPIHHCNDKLKAME 64

Query: 64  EHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLE 123
           +HK  YL+ F+ R+ VS+E F+ +IK  E  LRNCYAETIAF+S+ F  MI +DA F++ 
Sbjct: 65  DHKRMYLQEFIARSGVSVEGFIEYIKENETRLRNCYAETIAFSSEYFIKMILMDAAFVIM 124

Query: 124 FFLRGFLRDFITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYE 183
             L+    DF  S D I+  P     +  D+ LLENQLP FIL+E   L++ +T      
Sbjct: 125 LLLKWTYTDFRGSRDSIFYPPYKSIDVRVDICLLENQLPFFILDE---LSRLSTIIGNSP 181

Query: 184 GLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFRGQKM 243
             +L  ++ WF+   +    + ++L   + SE KH +D   +  +P +            
Sbjct: 182 KATLIELTHWFFSCEWGPWAVWENLGSIEISEVKHLVDFLTIYHRPTEQQPIEELEVLTA 241

Query: 244 PGAMELHQTGVKFNVGTSKNPFDITFD--KGIVKIPFVTIYDNTEKFYRNVLAFERMHGY 301
           P   +LHQ GVKF + + KN  DI FD  KG ++IP + +   TE   RN+ AFE+ HG 
Sbjct: 242 PSVKDLHQAGVKFVLSSRKNLLDIKFDRNKGRLEIPRLKLDGRTEIIIRNMQAFEQCHGL 301

Query: 302 TR-YLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGT-RFG 357
              Y+ DYI +M       +D ++L++N IV   L ++E +   F +L K+  + +  F 
Sbjct: 302 KHGYVGDYICLMGLFLGASKDVEILVENRIVDNCLPSNEEVVQLFYNLNKQNSVWSGTFL 361

Query: 358 YTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVI 413
           +  L++DL ++C+ PW+ WKANL+QNYFNTPWA +SVAGAVILL+LT+IQ+ CS++
Sbjct: 362 FKGLIKDLNAFCERPWNKWKANLKQNYFNTPWAVLSVAGAVILLILTVIQSVCSIL 417

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
TAIR|locus:2116667	680	AT4G31980 "AT4G31980" [Arabido	0.959	0.585	0.402	4e-74
TAIR|locus:2148042	353	AT5G11290 "AT5G11290" [Arabido	0.824	0.968	0.342	4e-51
TAIR|locus:2044918	448	AT2G36430 "AT2G36430" [Arabido	0.922	0.854	0.300	2.5e-42
TAIR|locus:2083138	503	AT3G50160 "AT3G50160" [Arabido	0.946	0.781	0.304	1.2e-40
TAIR|locus:2083123	509	AT3G50150 [Arabidopsis thalian	0.397	0.324	0.366	2.5e-40
TAIR|locus:2074760	588	AT3G50180 [Arabidopsis thalian	0.896	0.632	0.310	2.9e-39
TAIR|locus:2083078	531	AT3G50120 "AT3G50120" [Arabido	0.419	0.327	0.337	5.2e-39
TAIR|locus:2083108	539	AT3G50140 [Arabidopsis thalian	0.387	0.298	0.345	2.2e-37
TAIR|locus:2074755	541	AT3G50170 "AT3G50170" [Arabido	0.397	0.304	0.349	5e-37
TAIR|locus:2083093	564	AT3G50130 [Arabidopsis thalian	0.385	0.283	0.337	1.8e-36

TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 168/417 (40%), Positives = 245/417 (58%)

Query:     7 LADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHK 66
             L DS+++K   L  LS  CCIY+VP   R L+P+ YTP++VS GPLH G EEL+AME+ K
Sbjct:   275 LVDSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDQK 334

Query:    67 LRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIXXXXXXX 126
              RYL  F+ RTN S+E  +   +  E   R+CYAE +  +SD+F  M+ VD         
Sbjct:   335 YRYLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVELLL 394

Query:   127 XXXXXXXITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGL- 185
                       +DRI+G   +I  +  D+ L+ENQLP F++ E+F L     Y  Y +G  
Sbjct:   395 RSHYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIFLLL--LNY--YQQGTP 450

Query:   186 SLFRISRWFWRSGFPNLPIDKDLLDTKF-SEAKHFLDLPRLCLQPPQSPAQIGFRGQKM- 243
             S+ ++++  + S F +  ID    D KF +E +HF+DL R C  P Q P ++ +   K+ 
Sbjct:   451 SIIQLAQRHF-SYFLSR-ID----DEKFITEPEHFVDLLRSCYLP-QFPIKLEYTTVKVD 503

Query:   244 --PGAMELHQTGVKFNVG-TSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHG 300
               P A ELH  GV+F    TS    DI+F  G++KIP + + D TE  Y+N++ FE+   
Sbjct:   504 NAPEATELHTAGVRFKPAETSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCRC 563

Query:   301 YTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFGY 358
               +   DYI+++     +P D  LLI +GI+   LGNS  +SN F S+ KE     RF +
Sbjct:   564 SNKNFLDYIMLLGCFIKSPTDADLLIHSGIIVNYLGNSVDVSNLFNSISKEVIYDRRFYF 623

Query:   359 TNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSVIGL 415
             + L E+LQ+YC +PW+ WKA LR++YF+ PWA  SV  A++LL+LT IQ+ CS++ L
Sbjct:   624 SMLSENLQAYCNTPWNRWKAILRRDYFHNPWAVASVFAALLLLLLTFIQSVCSILAL 680

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2148042 AT5G11290 "AT5G11290" [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 125/365 (34%), Positives = 192/365 (52%)

Query:    62 MEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIXX 121
             ME+HKLRYL+ F+ RT +S+E  +   +  E   R CY E +  +SD++  M+ VDA   
Sbjct:     1 MEDHKLRYLQSFIPRTALSLEDLVRVARTWEERARFCYTEDVRLSSDEYVKMLIVDASFL 60

Query:   122 XXXXXXXXXXXXITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDY 181
                             DRIYGK ++I  +  D+ LLENQLP F++  +F L       DY
Sbjct:    61 VELLLRSQFDVYRGMLDRIYGKQKMIVDVNHDVMLLENQLPYFVVEGMFGLLHV----DY 116

Query:   182 YEGLS-LFRISRWFWRSGFPNLP-IDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQIGFR 239
             +  L  L RI    ++  + ++P   + + D+K     HF+DL    L+    P  + F 
Sbjct:   117 HRELPPLTRIIHNHFKKFWMSIPSFSRSISDSKIC---HFVDL----LRSIHLPLVLSFP 169

Query:   240 GQKMP------GAMELHQTGVKFNVGTSKN-PFDITFDKGIVKIPFVTIYDNTEKFYRNV 292
             G  M        A E+   GVK     +     DI+F  G++ IP + I D TE  YRN+
Sbjct:   170 GGSMRMMDSVLSAKEIQNAGVKLQPADNNTCALDISFANGVLTIPKIKINDITESLYRNI 229

Query:   293 LAFERMHGYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIV--GLGNSERLSNFFLSLIKEC 350
             + FE+ H    Y   Y+  +S    +P D +L I +GI+    GN+E +S  F S++KE 
Sbjct:   230 ILFEQCHRLDAYFIHYMRFLSCFIRSPMDAELFIDHGIIVNRFGNAEDVSRLFNSILKET 289

Query:   351 PMGTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTAC 410
                + F Y  +  +LQ++C +PW+ WKA LR++YF+ PW++ SV  A +LL+LT +Q  C
Sbjct:   290 SY-SGFYYKTVYGNLQAHCNAPWNKWKATLRRDYFHNPWSAASVVAACVLLLLTFVQAIC 348

Query:   411 SVIGL 415
             S++ L
Sbjct:   349 SILAL 353

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 121/403 (30%), Positives = 193/403 (47%)

Query:    25 CCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRT-NVSIEY 83
             C I+RVPQ     +   Y P++VSIGP H G  +LK +EEHK RYL   L RT N+++E 
Sbjct:    45 CSIFRVPQSMIDCNGRCYEPRVVSIGPYHRGQTQLKMIEEHKWRYLNVLLTRTQNLTLED 104

Query:    84 FLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIXXXXXXXXXXXXXXITSDDRIYGK 143
             ++  +K  E   R CY+ETI  +S++F  M+ +D                   +D +   
Sbjct:   105 YMKSVKNVEEVARECYSETIHMDSEEFNEMMVLDGCFLLELFRKVNNLVPFEPNDPLVAM 164

Query:   144 PRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLP 203
               ++     D   LENQ+P F+L  LF+L +     +     SL  ++  F+ +      
Sbjct:   165 AWVLPFFYRDFLCLENQIPFFVLETLFNLTRGDNENE--TNASLQSLAFAFFNNMMHRT- 221

Query:   204 IDKDLLDTKFSEAKHFLDLPRLCLQPPQ---SPAQIGFRGQKMPGAM-----ELHQTGVK 255
              ++DL   K   AKH LDL R    P     +P       +KMP  +     +L + G+K
Sbjct:   222 -EEDLARFKELRAKHLLDLLRSSFIPESELHTPPATNPGKEKMPSHIIHSISKLRRAGIK 280

Query:   256 FNVGTSKNPFDIT-FDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLNDYIIIMS 313
                      F +  F  G +++P +T+ D    F  N +A+E+ H   + +   Y  ++ 
Sbjct:   281 LRELKDAESFLVVRFRHGTIEMPAITVDDFMSSFLENCVAYEQCHVACSMHFTTYATLLD 340

Query:   314 YLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMG-TRFGYTNLVEDLQSYCK 370
              L +T +D + L    I+    G    L+ F  SL ++     T+    +L E++  Y K
Sbjct:   341 CLTNTYKDVEYLCDQNIIENYFGTDTELAKFVNSLGRDVAFDITQCYLKDLFEEVNEYYK 400

Query:   371 SPWH-SWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412
             S WH  W A  +  YFN+PW+ +S   A++LLVL++IQT  +V
Sbjct:   401 SSWHVEW-ATFKFTYFNSPWSFVSALAALVLLVLSVIQTIYTV 442

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 129/424 (30%), Positives = 201/424 (47%)

Query:     2 DDIKMLADSVRSKFETLHPLSNGCCIYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKA 61
             D +K L D+  + ++ L       CIYRVP   +      Y P++VSIGP HHG++ L  
Sbjct:    88 DKMKTLGDNATTSWDNL-------CIYRVPPYLQENDTKSYMPQIVSIGPYHHGHKHLMP 140

Query:    62 MEEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDA--- 118
             ME HK R +   + R    IE ++  +K  E + R CY   I  N ++F  M+ +D    
Sbjct:   141 MERHKWRAVNMVMARAKHDIEMYIDAMKELEEKARACYQGPINMNRNEFIEMLVLDGVFI 200

Query:   119 IXXXXXXXXXXXXXXITSDDRIYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATY 178
             I                 +D ++G   L+  +  D+ +LENQLP  +L  L  L +    
Sbjct:   201 IEIFKGTSEGFQEIGYAPNDPVFGMRGLMQSIRRDMVMLENQLPWSVLKGLLQLQRP--- 257

Query:   179 GDYYEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLD-LPRLCLQPPQSPAQIG 237
              D  + +++ ++ + F++   P LP  + L +       H LD L R  LQ   +  +  
Sbjct:   258 -DVLDKVNV-QLFQPFFQ---PLLPTREVLTE---EGGLHCLDVLRRGLLQSSGTSDEDM 309

Query:   238 FRGQKMPGAM-----ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNV 292
                 K P  +     EL   GV+F    + + +DI F  G +KIP + I+D T+  + N+
Sbjct:   310 SMVNKQPQQLIHCVTELRNAGVEFMRKETGHFWDIEFKNGYLKIPKLLIHDGTKSLFLNL 369

Query:   293 LAFERMH-GYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKE 349
             +AFE+ H   ++ +  YII M  L ++ ED   L   GI+   LG+   +S+ F  L KE
Sbjct:   370 IAFEQCHIKSSKKITSYIIFMDNLINSSEDVSYLHHYGIIENWLGSDSEVSDLFNGLGKE 429

Query:   350 CPMGTRFGYTN-LVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQT 408
                    GY + L  ++  Y +  W+  KA LR  YFN PWA  S   AV LL+ T  Q+
Sbjct:   430 VIFDPNDGYLSALTGEVNIYYRRKWNYLKATLRHKYFNNPWAYFSFIAAVTLLIFTFCQS 489

Query:   409 ACSV 412
               +V
Sbjct:   490 FFAV 493

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2083123 AT3G50150 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
 Identities = 62/169 (36%), Positives = 91/169 (53%)

Query:   248 ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYT-RYLN 306
             EL   GV F    +   +DI F  G +KIP + I+D T+  + N++AFE+ H  +   + 
Sbjct:   333 ELRGAGVNFMRKETGQLWDIEFKNGYLKIPKLLIHDGTKSLFSNLIAFEQCHTQSSNNIT 392

Query:   307 DYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFGY-TNLVE 363
              YII M  L ++ +D   L  +GI+   LG+   +++ F  L KE     + GY + L  
Sbjct:   393 SYIIFMDNLINSSQDVSYLHHDGIIEHWLGSDSEVADLFNRLCKEVIFDPKDGYLSQLSR 452

Query:   364 DLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412
             ++  Y    W+S KA LRQ YFN PWA  S + AVILL LT  Q+  +V
Sbjct:   453 EVNRYYSRKWNSLKATLRQKYFNNPWAYFSFSAAVILLFLTFFQSFFAV 501

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2074760 AT3G50180 [Arabidopsis thaliana (taxid:3702)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 127/409 (31%), Positives = 201/409 (49%)

Query:    26 CIYRVPQGWRCLHPND---YTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTNVSIE 82
             CIY+VP     LH ND   Y P+ VS+GP HHG ++ ++ME HK R +   L+RTN  IE
Sbjct:   179 CIYKVPH---YLHGNDKKSYFPQTVSLGPYHHGRQQTQSMECHKWRAVNMVLKRTNQGIE 235

Query:    83 YFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDA---IXXXXXXXXXXXXXXITSDDR 139
              FL  +   E + R CY  +I  +S++F  M+ +D    +                 +D 
Sbjct:   236 VFLDAMIELEEKARACYEGSIVLSSNEFTEMLLLDGCFILELLQGVNEGFLKLGYDHNDP 295

Query:   140 IYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGF 199
             ++     +  +  D+ +LENQLPLF+LN L +L +  T      GL +  + R+F     
Sbjct:   296 VFAVRGSMHSIQRDMIMLENQLPLFVLNRLLEL-QPGTQNQ--TGL-VELVVRFF----I 347

Query:   200 PNLPIDKDLLDTK----FSEAK-HFLDLPRLCLQPPQSPAQIGFRG------QKM-PGAM 247
             P +P  + L +       S  + H LD+    L  P+S  +  +        Q++ P   
Sbjct:   348 PLMPTAETLTENSPPRGVSNGELHCLDVFHRSLLFPRSSGKANYSRVADKHLQRVIPTVT 407

Query:   248 ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLN 306
             EL   G KF +  +   +DI F  G ++IP + I+D T+  + N++AFE+ H   +  + 
Sbjct:   408 ELRDAGFKFKLNKTDRFWDIKFSNGYLEIPGLLIHDGTKSLFLNLIAFEQCHIESSNDIT 467

Query:   307 DYIIIMSYLAHTPEDGKLLIQNGIV--GLGNSERLSNFFLSLIKECPMGTRFGYTN--LV 362
              YII M  L  +PED   L   GI+   LG++  +++ F  L +E    T+  Y +  L+
Sbjct:   468 SYIIFMDNLIDSPEDISYLHHCGIIEHSLGSNSEVADMFNQLCQEVVFDTKDIYLSQLLI 527

Query:   363 EDLQSYCKS---PWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQT 408
             E  + Y ++     +S K  L   Y + PWA +S   AVILL+LT  Q+
Sbjct:   528 EVHRCYKQNYSRKLNSLKTTLILKYLDNPWAYLSFFAAVILLILTFSQS 576

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2083078 AT3G50120 "AT3G50120" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 5.2e-39, Sum P(2) = 5.2e-39
 Identities = 60/178 (33%), Positives = 94/178 (52%)

Query:   239 RGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERM 298
             R Q +    EL + G+KF    +   +D+ F  G ++IP + I+D T+  + N++AFE+ 
Sbjct:   346 RQQLIHCVTELKEAGIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQC 405

Query:   299 H-GYTRYLNDYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTR 355
             H   +  +  YII M  L  + ED   L   GI+   LG+   +++ F  L +E    T 
Sbjct:   406 HIDSSNDITSYIIFMDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTE 465

Query:   356 FGY-TNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412
               Y + L  ++  Y    W++W+A L+  YFN PWA +S   AVILLVLT  Q+  +V
Sbjct:   466 DSYLSRLSIEVNRYYDHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAV 523

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
 Identities = 57/165 (34%), Positives = 85/165 (51%)

Query:   248 ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLN 306
             EL + G+KF    S   +DI F  G ++IP + I+D T+  + N++A+E+ H   T  + 
Sbjct:   363 ELREAGIKFKRRKSDRFWDIQFKNGCLEIPKLLIHDGTKSLFSNLIAYEQCHIDSTNDIT 422

Query:   307 DYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFGY-TNLVE 363
              YII M  L  + ED + L    I+   LGN   +++ F  L +E        Y + L  
Sbjct:   423 SYIIFMDNLIDSAEDIRYLHYYDIIEHWLGNDSEVADVFNRLCQEVAFDLENTYLSELSN 482

Query:   364 DLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQT 408
              +  Y    W+  KA L+  YF+ PWA  S   AVILL+LTL Q+
Sbjct:   483 KVDRYYNRKWNVLKATLKHKYFSNPWAYFSFFAAVILLLLTLFQS 527

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 5.0e-37, Sum P(2) = 5.0e-37
 Identities = 59/169 (34%), Positives = 91/169 (53%)

Query:   248 ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLN 306
             EL + GVKF    +   +DI F  G ++IP + I+D T+  + N++AFE+ H   + ++ 
Sbjct:   363 ELREAGVKFRKRKTDRFWDIEFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIESSNHIT 422

Query:   307 DYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFGY-TNLVE 363
              YII M  L ++ ED   L   GI+   LG+   +++ F  L +E     +  + + L  
Sbjct:   423 SYIIFMDNLINSSEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDPKDSHLSRLSG 482

Query:   364 DLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQTACSV 412
             D+  Y    W+  KA L   YFN PWA  S + AVILL+LTL Q+  +V
Sbjct:   483 DVNRYYNRKWNVLKATLTHKYFNNPWAYFSFSAAVILLLLTLCQSFYAV 531

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2083093 AT3G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
 Identities = 56/166 (33%), Positives = 90/166 (54%)

Query:   248 ELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLN 306
             EL + G+KF    +   +DI F  G ++IP + I+D T+  + N++AFE+ H   +  + 
Sbjct:   388 ELREAGIKFRTRKTDRFWDIRFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIDSSNDIT 447

Query:   307 DYIIIMSYLAHTPEDGKLLIQNGIVG--LGNSERLSNFFLSLIKECPMGTRFGYTNLVED 364
              YII M  L  + ED + L   GI+   LGN   +++ F  L +E     +  Y + + +
Sbjct:   448 SYIIFMDNLIDSSEDVRYLHYCGIIEHWLGNDYEVADLFNRLCQEVAFDPQNSYLSQLSN 507

Query:   365 L--QSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLTLIQT 408
                ++Y +  W+  KA L+  YFN PWA  S   A++LLVLTL Q+
Sbjct:   508 KVDRNYSRK-WNVLKAILKHKYFNNPWAYFSFFAALVLLVLTLFQS 552

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XVIII000126 hypothetical protein (410 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	415
pfam03140	387	pfam03140, DUF247, Plant protein of unknown functi	1e-112

>gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function

 Score =  333 bits (857), Expect = e-112
 Identities = 145/395 (36%), Positives = 212/395 (53%), Gaps = 25/395 (6%)

Query: 27  IYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTN--VSIEYF 84
           IYRVP   R ++P  Y P++VSIGP HHG   L+AMEEHK RYL  FL RT   +S+E  
Sbjct: 1   IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSLEDL 60

Query: 85  LTFIKVKEAELRNCYAE-TIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGK 143
           L  ++  E E R CYAE     +S++F  M+ +D  F+LE FLR         +D ++ +
Sbjct: 61  LAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLS-EGIYGENDPLFAR 119

Query: 144 PRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYEGLSLFRISRWFWRSGFPNLP 203
             L+  +  DL LLENQ+P F+L +LF+L             SL  ++  F+      LP
Sbjct: 120 RWLLSLIRRDLLLLENQIPFFVLEKLFELLTGRQDVKT----SLNDLALRFFYDCESLLP 175

Query: 204 IDKDLLDTKFSEAKHFLDLPRLCLQPPQSPAQI---------GFRGQKMPGAMELHQTGV 254
            D  + ++      H LDL R  L P  SP                + +P A EL + GV
Sbjct: 176 PDDLIEESNV---HHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELREAGV 232

Query: 255 KF-NVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLNDYIIIM 312
           +F    T+    D++F +G+++IP + + D TE   RN++AFE+ H G   ++  Y+  M
Sbjct: 233 RFKRRKTASCILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGNHVTSYVAFM 292

Query: 313 SYLAHTPEDGKLLIQNGIV--GLGNSERLSNFFLSLIKECPMGT-RFGYTNLVEDLQSYC 369
             L +T ED  LL + GI+   LG+ E ++ FF  L +           + + ED+  YC
Sbjct: 293 DNLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSGVFEDVNRYC 352

Query: 370 KSPWHSWKANLRQNYFNTPWASISVAGAVILLVLT 404
           +S W+ WKA LR+ YF+ PWA+IS+  AV+LLVLT
Sbjct: 353 RSRWNRWKATLRRKYFSNPWAAISLLAAVVLLVLT 387

The function of the plant proteins constituting this family is unknown. Length = 387

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	415
PF03140	391	DUF247: Plant protein of unknown function; InterPr	100.0

>PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown

Probab=100.00  E-value=2.6e-109  Score=844.77  Aligned_cols=370  Identities=41%  Similarity=0.709  Sum_probs=332.2

Q ss_pred             eeecCCcccccCCCCCccceeeeccccCCchhHhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhHHHHHhhhhccc
Q 014981           27 IYRVPQGWRCLHPNDYTPKMVSIGPLHHGNEELKAMEEHKLRYLRCFLQRTN---VSIEYFLTFIKVKEAELRNCYAETI  103 (415)
Q Consensus        27 I~rVP~~lr~~n~~aY~P~~VsIGPyHhg~~~L~~mE~~K~~~l~~~l~r~~---~~~~~~~~~i~~~e~~aR~~Y~e~~  103 (415)
                      |||||+++|++|+++|+|++|||||||||+++|+.||++||+|++.|++|.+   .++++++++|+++|++||+||++++
T Consensus         1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~   80 (391)
T PF03140_consen    1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI   80 (391)
T ss_pred             CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence            8999999999999999999999999999999999999999999999999998   7899999999999999999999999


Q ss_pred             C-CChHHHHHHHHHhHHHHHHHHHhhccCCCCCCCCC-CCCCCCchhhhhhhhhhcccCchHHHHHHHHHhhhcccCCCC
Q 014981          104 A-FNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDR-IYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDY  181 (415)
Q Consensus       104 ~-~~~~eF~~MmllDGCFiLe~~~~~~~~~~~~~~d~-~~~~~~~~~~i~~Dl~LLENQiPffVLe~L~~~~~~~~~~~~  181 (415)
                      + +++++|++||++|||||||+|++...  ..+.+|| +++.+|....|++||+|||||||||||++||++...+.   .
T Consensus        81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~---~  155 (391)
T PF03140_consen   81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSK---S  155 (391)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccc---c
Confidence            7 99999999999999999999998876  2345788 88999999999999999999999999999999998433   3


Q ss_pred             cccchHHHHHHHhhccCCCCCCCCccccccccccCCCchhhhhhhcCCCC--CC-CC--CC------CCCcccCCHHhHH
Q 014981          182 YEGLSLFRISRWFWRSGFPNLPIDKDLLDTKFSEAKHFLDLPRLCLQPPQ--SP-AQ--IG------FRGQKMPGAMELH  250 (415)
Q Consensus       182 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~HlLdL~~~~~~p~~--~~-~~--~~------~~~~~~~sAteL~  250 (415)
                      ....++.+++.+||....+......   .....+++|||||+|.+++|++  .. .+  +.      .....+||||||+
T Consensus       156 ~~~~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~eL~  232 (391)
T PF03140_consen  156 DVDESLIDLVLKFFYKHWPSWPPDE---PISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATELR  232 (391)
T ss_pred             CccchHHHHHHhHhccccccccccc---cccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHHHH
Confidence            4557899999999942221111101   2233578999999999999932  11 11  11      1245799999999


Q ss_pred             HcCcEEecCCCC-CCcceeEcCceEEeceEEeecCchhhhhhHHHHHHhc-CCccchhhHHHHHHhhcCChhhHHHHHHC
Q 014981          251 QTGVKFNVGTSK-NPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMH-GYTRYLNDYIIIMSYLAHTPEDGKLLIQN  328 (415)
Q Consensus       251 ~aGVkfk~~~~~-~llDI~F~~g~L~IP~l~id~~T~~llrNLiA~Eq~~-~~~~~vtsYv~fM~~Li~t~~DV~lL~~~  328 (415)
                      +|||+||++++. +++||+|++|+|+||+|.||++|+++||||||||||+ ..+.+||||+.||++||+|++||++|+++
T Consensus       233 ~aGV~fk~~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~~k  312 (391)
T PF03140_consen  233 EAGVKFKPSETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLRRK  312 (391)
T ss_pred             hCCcEEeeccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHHhC
Confidence            999999999886 5999999999999999999999999999999999999 77899999999999999999999999999


Q ss_pred             Cce--ecCChHHHHHHHHhhhccCCC-CCCcchHHHHHHHHhHhcCchhhhhhhhcccccccchHHHHHHHHHHHHHHH
Q 014981          329 GIV--GLGNSERLSNFFLSLIKECPM-GTRFGYTNLVEDLQSYCKSPWHSWKANLRQNYFNTPWASISVAGAVILLVLT  404 (415)
Q Consensus       329 gIi--~lgsdeeva~lFn~L~~~~~~-~~~~y~~~~~~~ln~y~~~r~~~~~a~l~~~yf~npw~~is~~aA~ill~lT  404 (415)
                      |||  ++|||+||++|||+||++++. .+++||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|+||
T Consensus       313 gIi~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~lT  391 (391)
T PF03140_consen  313 GIIVNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLLT  391 (391)
T ss_pred             CeEecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHhC
Confidence            999  899999999999999999987 4578999999999999999999999999999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	415
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 9e-08
 Identities = 65/436 (14%), Positives = 121/436 (27%), Gaps = 145/436 (33%)

Query: 7   LADSVRSKFETLHPLSNGCCIYRVPQGW----RCLHPNDYTPKMVSIGPLHHGNEELKAM 62
           +A  V   ++    +     I+     W     C  P      +  +  L+  +    + 
Sbjct: 166 VALDVCLSYKVQCKMDFK--IF-----WLNLKNCNSPETVLEMLQKL--LYQIDPNWTSR 216

Query: 63  EEHKLRYLRCFLQRTNVSIEYFLTFIKVKEAE-----LRN-CYAETI-AFN--------S 107
            +H          R +         +K K  E     L N   A+   AFN        +
Sbjct: 217 SDHSSNIK----LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT 272

Query: 108 DDFATMIFVDAI----FLLEFFLRGF--------LRDFITSDDR------IYGKPRLIDQ 149
                  F+ A       L+              L  ++    +      +   PR +  
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS- 331

Query: 150 LIG----------DLWLLENQLPLFILNELF-DLAKTATYGDYYEGLSLFRISRWFWRSG 198
           +I           D W   N   L  + E   ++ + A Y   ++ LS+F          
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP--------- 382

Query: 199 FPNLPIDKDLL-----DTKFSEAKHFLD-LPRLCL---QPPQSPAQI-----GFRGQKMP 244
            P+  I   LL     D   S+    ++ L +  L   QP +S   I       +  K+ 
Sbjct: 383 -PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK-VKLE 440

Query: 245 GAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRNVLAFERMHGYTRY 304
               LH++                          V  Y+  + F  + L    +  Y   
Sbjct: 441 NEYALHRS-------------------------IVDHYNIPKTFDSDDLIPPYLDQY--- 472

Query: 305 LNDYIIIMSYLA-HTPEDGKLLIQNGIVGLGNSERLSNF--------FLS--LIKEC-PM 352
                   S++  H            +  + + ER++ F        FL   +  +    
Sbjct: 473 ------FYSHIGHH------------LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514

Query: 353 GTRFGYTNLVEDLQSY 368
                  N ++ L+ Y
Sbjct: 515 NASGSILNTLQQLKFY 530

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 7e-06
 Identities = 40/318 (12%), Positives = 78/318 (24%), Gaps = 120/318 (37%)

Query: 35  RCLH--PNDYTPKMVSIGPLHHG--NEELKAMEEHKLRYLRCFLQRTNVSIEYFLTFIKV 90
           + L   P D   ++++  P       E ++        +      +    IE  L  ++ 
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE- 367

Query: 91  KEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDRIYGKPRLIDQL 150
             AE R  +        D  +  +F                        I   P     L
Sbjct: 368 -PAEYRKMF--------DRLS--VFPP-------------------SAHI---PT---IL 391

Query: 151 IGDLWL-LENQLPLFILNELFDLA------KTATYGDYYEGLSL---------------- 187
           +  +W  +     + ++N+L   +      K +T       + L                
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP--SIYLELKVKLENEYALHRSI 449

Query: 188 ---FRISRWFWRSGFPNLPID------------KDLLDTKFSEAKH-FLDLPRLCLQPPQ 231
              + I + F         +D                  + +  +  FLD          
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF--------- 500

Query: 232 SPAQIGFRGQKMPGAMELHQTGVKFNVGTSKNPFDITFDKGIVKIPFVTIYDNTEKFYRN 291
                 F  QK      +      +N   S                  T+     KFY+ 
Sbjct: 501 -----RFLEQK------IRHDSTAWNASGSILN---------------TLQQ--LKFYKP 532

Query: 292 VLAFERMHGYTRYLNDYI 309
            +  +    Y R +N  +
Sbjct: 533 YI-CDNDPKYERLVNAIL 549

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 43/164 (26%)

Query: 28  YRVPQGWRCLHPNDYTPKMVS------IGPLHHGNEELKAMEEHKLRYL--RCFLQRTNV 79
           Y +P   +    +D  P  +       IG  HH    LK +E  +   L    FL     
Sbjct: 453 YNIP---KTFDSDDLIPPYLDQYFYSHIG--HH----LKNIEHPERMTLFRMVFLD---- 499

Query: 80  SIEYFLTFIKVKEAELRNCYAETIAFNSDDFATMIFVDAIFLLEFFLRGFLRDFITSDDR 139
                  F++ K   +R+   ++ A+N+              L+F+     + +I  +D 
Sbjct: 500 -----FRFLEQK---IRH---DSTAWNASGSILNTLQQ----LKFY-----KPYICDNDP 539

Query: 140 IYGKPRLIDQLIGDLWLLENQLPLFILNELFDLAKTATYGDYYE 183
            Y   RL++ ++  L  +E  L      +L  +A  A     +E
Sbjct: 540 KY--ERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00