Citrus Sinensis ID: 015003
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FIK7 | 415 | Probable acetyl-CoA acety | yes | no | 1.0 | 0.997 | 0.802 | 0.0 | |
| Q8S4Y1 | 403 | Acetyl-CoA acetyltransfer | no | no | 0.961 | 0.987 | 0.812 | 0.0 | |
| Q9UQW6 | 395 | Acetyl-CoA acetyltransfer | yes | no | 0.939 | 0.984 | 0.593 | 1e-129 | |
| Q12598 | 403 | Acetyl-CoA acetyltransfer | N/A | no | 0.946 | 0.972 | 0.545 | 1e-116 | |
| Q04677 | 403 | Acetyl-CoA acetyltransfer | N/A | no | 0.937 | 0.962 | 0.543 | 1e-115 | |
| Q86AD9 | 414 | Probable acetyl-CoA acety | yes | no | 0.934 | 0.934 | 0.538 | 1e-113 | |
| P41338 | 398 | Acetyl-CoA acetyltransfer | yes | no | 0.937 | 0.974 | 0.530 | 1e-111 | |
| Q6NU46 | 420 | Acetyl-CoA acetyltransfer | N/A | no | 0.927 | 0.914 | 0.538 | 1e-106 | |
| Q6GN02 | 420 | Acetyl-CoA acetyltransfer | N/A | no | 0.927 | 0.914 | 0.541 | 1e-106 | |
| P10551 | 398 | Acetyl-CoA acetyltransfer | N/A | no | 0.942 | 0.979 | 0.525 | 1e-106 |
| >sp|Q9FIK7|THIC2_ARATH Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/415 (80%), Positives = 378/415 (91%), Gaps = 1/415 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASALVLE M +G+S L
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFMSEKTIGYSAL 415
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9 |
| >sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/399 (81%), Positives = 364/399 (91%), Gaps = 1/399 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
SES+ RDVCIVGVARTPMGGFLGSLSS+ ATKLGS+AI ALKRANV P LVQEV FGN
Sbjct: 5 SESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGN 64
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTT+NKVC+SGMKAVM+AAQSIQLGIND+VVAGGM
Sbjct: 65 VLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGM 124
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN PKYLAEARKGSR GHD++VDGMLKDGLWDVYND GMG CAE+CA K ITR++Q
Sbjct: 125 ESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQ 184
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D YA++SF+RGIAAQ +G F WEI PVE+S GRG+P IVDKDEGL KFDAAKL KLRPS
Sbjct: 185 DDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPS 244
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GG+VTAGNAS ISDGAAALVLVSG KAL+LGL V+AKI+G+ DAAQ PE+FTTAP+
Sbjct: 245 FKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFFTTAPA 304
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAIA+AGLE+SQ+DYYEINEAF+VVA+ANQKLLG+ PE+VN +GGAVSLGHPLGCS
Sbjct: 305 LAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCS 364
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARIL+TLLG+L+ + GKYGVGG+CNGGGGASALVLEL+
Sbjct: 365 GARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q9UQW6|THIL_SCHPO Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/389 (59%), Positives = 293/389 (75%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV RTPMG F GS +S+ ATKLGSIAI+ AL+R N+KP V EVF GNV+SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQ ALGAG+P S+VCTT+NKVC+SGMKA +L AQ+I G +IVVAGG ESMSNAP
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y + R G++ G+ +VDG+L+DGL D Y+ MG AE+CA +H+I R QD++AI S
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISS 184
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253
+KR AQ + F EI PVE+ GRGKP +V +DE + + KL +R FK G+V
Sbjct: 185 YKRAQNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVFKSNGTV 244
Query: 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIA 313
TA NAS ++DGA+ALVL+S K ELGL+ +AKI G+ +AAQ PE FTT+PSLAIPKA+
Sbjct: 245 TAANASTLNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALK 304
Query: 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTL 373
+AG+EASQ+DYYEINEAFSVVA+AN K+LGLDPE+VN +GG V++GHPLG SG+RI+ TL
Sbjct: 305 HAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTL 364
Query: 374 LGVLRHKKGKYGVGGICNGGGGASALVLE 402
+L K K GV +CNGGGGAS++V+E
Sbjct: 365 AYILAQKDAKIGVAAVCNGGGGASSIVIE 393
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Catalyzes the formation of acetoacetyl-CoA in the biosynthesis of mevalonate, an intermediate required for the biosynthesis of sterols and nonsterol isoprenoids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q12598|THIA_CANTR Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3 | Back alignment and function description |
|---|
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/394 (54%), Positives = 288/394 (73%), Gaps = 2/394 (0%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G F GSLSS++ + LG+ A++ AL K +KP V E+ FG VL AN+G
Sbjct: 6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ AL AG+P+S+V +TINKVC+SGMKAV++ AQ+I G +DIVV GG ESMSN P
Sbjct: 66 QAPARQVALKAGLPDSIVASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTP 125
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL AR G+R G +VDG+ KDGL DVY + MGV AE CA H +R++QD++AI S
Sbjct: 126 YYLPSARSGARYGDAIMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINS 185
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+K+ A + G F EIAPV + RGKP +++ DE + KF+ +L R F KE G+
Sbjct: 186 YKKAGKALSEGKFKSEIAPVTIKGFRGKPDTVIENDEEIGKFNEERLKSARTVFQKENGT 245
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DG AALVLVS K +LGL+ +AKI G+ +AA+ P FT AP+LA+PKA+
Sbjct: 246 VTAPNASKLNDGGAALVLVSEAKLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAV 305
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL ++D++E+NEAFSVV +AN +L+ + E++N +GGAV++GHPLGCSGARI+VT
Sbjct: 306 KHAGLTVDRVDFFELNEAFSVVGLANAELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVT 365
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLELMQA 406
LL VL + G++GV G+CNGGGGASA+V+E + A
Sbjct: 366 LLSVLTQEGGRFGVAGVCNGGGGASAVVIEKIDA 399
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Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q04677|THIB_CANTR Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3 | Back alignment and function description |
|---|
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/390 (54%), Positives = 285/390 (73%), Gaps = 2/390 (0%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G F GSLSS++ + LG+ A++ AL K +KP V E+ FG VL AN+G
Sbjct: 6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ AL AG+P+S++ +TINKVC+SGMKAV++ AQ+I G +DIVV GG ESMSN P
Sbjct: 66 QAPARQVALKAGLPDSIIASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSNTP 125
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL AR G+R G +VDG+ KDGL DVY + MGV AE CA H +R++QD++AI S
Sbjct: 126 YYLPSARSGARYGDAVMVDGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINS 185
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+K+ A + G F EIAPV + RGKP +++ DE + KF+ +L R F KE G+
Sbjct: 186 YKKAGKALSEGKFKSEIAPVTIKGFRGKPDTVIENDEEIGKFNEDRLKSARTVFQKENGT 245
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DG AALVLVS K +LGL+ +AKI G+ +AA+ P FT AP+LA+PKA+
Sbjct: 246 VTAPNASKLNDGGAALVLVSEAKLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAV 305
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL ++D++E+NEAFSVV +AN +L+ + E++N +GGAV++GHPLGCSGARI+VT
Sbjct: 306 KHAGLTVDRVDFFELNEAFSVVGLANAELVKIPLEKLNVYGGAVAMGHPLGCSGARIIVT 365
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LL VL + G++G G+CNGGGGASA+V+E
Sbjct: 366 LLSVLTQEGGRFGAAGVCNGGGGASAIVIE 395
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Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q86AD9|THIL1_DICDI Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/388 (53%), Positives = 276/388 (71%), Gaps = 1/388 (0%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
V IV RTP+G GSLS++ TKL SI IE A+KRA +KP V E GNV+SANLGQ
Sbjct: 26 VVIVSAVRTPIGSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQ 85
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
APARQ ALGAG+ + TTINKVCSSGMKA++ AQSI LG + VVAGG ESMS P
Sbjct: 86 APARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMSQVPY 145
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
Y + R G++ G+ T +DG+++DGL D YN MGVC + CA+K+ ITR++QD +A+ S+
Sbjct: 146 YADKMRFGAKYGNQTFIDGLVRDGLADAYNGSAMGVCGDDCADKYKITREQQDKFAVDSY 205
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254
R + AQ +G F EI V + GRG V +DE +K K+ L+P+F G+VT
Sbjct: 206 LRALEAQKNGFFNDEIVQVPI-VGRGGKVTYVVEDEEPKKVLFDKIPNLKPAFTPNGTVT 264
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
NAS ++DGA++++L+S A ELGL+ +A+I G+ADA QAP F TAP+LAIPKA+ N
Sbjct: 265 PANASKLNDGASSVILMSESHAKELGLKPLARIIGYADAEQAPIEFPTAPALAIPKALKN 324
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AG+ SQ+D +EINEAF+VV +AN K+L +D ++N +GGAV+LGHP+G SG RI+VTL
Sbjct: 325 AGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLT 384
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
+L++K KYGV ICNGGGG++ALVLE
Sbjct: 385 HLLQNKNLKYGVAAICNGGGGSTALVLE 412
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Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|P41338|THIL_YEAST Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG10 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/398 (53%), Positives = 279/398 (70%), Gaps = 10/398 (2%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLL-----VQEVFFGN 66
+++V IV ARTP+G F GSLSS +A +LG++A++ AL + P L E+ FGN
Sbjct: 2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGALAKV---PELDASKDFDEIIFGN 58
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQ AL AG+ N +V +T+NKVC+S MKA++L AQSI+ G D+VVAGG
Sbjct: 59 VLSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGC 118
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESM+NAP Y+ AR G++ G +VDG+ +DGL D Y+ MGV AE CA ITR++Q
Sbjct: 119 ESMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQ 178
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D++AI S+++ +Q G F EI PV + RGKP V KDE + KL R
Sbjct: 179 DNFAIESYQKSQKSQKEGKFDNEIVPVTIKGFRGKPDTQVTKDEEPARLHVEKLRSARTV 238
Query: 247 F-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
F KE G+VTA NAS I+DGAAA++LVS E L+ +A I+G+ +AA P FT APS
Sbjct: 239 FQKENGTVTAANASPINDGAAAVILVSEKVLKEKNLKPLAIIKGWGEAAHQPADFTWAPS 298
Query: 306 LAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
LA+PKA+ +AG+E + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGC
Sbjct: 299 LAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGC 358
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
SGAR++VTLL +L+ + GK GV ICNGGGGAS++V+E
Sbjct: 359 SGARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIE 396
|
Catalyzes the formation of acetoacetyl-CoA in the biosynthesis of mevalonate, an intermediate required for the biosynthesis of sterols and nonsterol isoprenoids. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6NU46|THILA_XENLA Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/390 (53%), Positives = 278/390 (71%), Gaps = 6/390 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V I ARTP+G F G+LSS+ ATKLGSIAI+ A++RA + V+EV+ GNVL A G
Sbjct: 34 EVVIASAARTPIGSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQG 93
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP+RQA LGAG+ S TTINKVC+SGMK+VMLAAQS+ G ++VAGGMESMSN P
Sbjct: 94 QAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVP 153
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
+ +R + G + D ++KDGL DVYN MG CAE A K +I+R+EQDS+AI S
Sbjct: 154 YCM--SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKFSISREEQDSFAIHS 211
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +SGL A EIAPV ++ +GKP IIV +DE ++ D +K KL+ F K+ G+
Sbjct: 212 YTRSKAAWDSGLIANEIAPVTIAQ-KGKPDIIVQEDEEYKRVDFSKFPKLKTVFQKDNGT 270
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA N+S ++DGAAAL+L++ A L + +A+I FADAA P F AP+ A+PK +
Sbjct: 271 VTAANSSTLNDGAAALLLMTTEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLL 330
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+ AGL+ I +EINEAFSVV +AN K+LG+DP +VN +GGAVSLGHP+G SGARI+
Sbjct: 331 SEAGLKKEDIAMWEINEAFSVVVLANIKMLGIDPARVNMNGGAVSLGHPIGMSGARIVGH 390
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+ L KKG++G+ GICNGGGGASA+++E
Sbjct: 391 MAHAL--KKGQFGIAGICNGGGGASAVLIE 418
|
Plays a major role in ketone body metabolism. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|Q6GN02|THILB_XENLA Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/390 (54%), Positives = 277/390 (71%), Gaps = 6/390 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V I ARTP+G F G+LSS+ ATKLGSIAI+ A++RA + V+EV+ GNVL A G
Sbjct: 34 EVVIASAARTPIGSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQG 93
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP+RQA LGAG+ S TTINKVC+SGMK+VMLAAQS+ G ++VAGGMESMSN P
Sbjct: 94 QAPSRQATLGAGLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVP 153
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
+ +R + G + D ++KDGL DVYN F MG CAE A K +I+R+EQD +AI S
Sbjct: 154 YCM--SRGATPYGGVKLEDIIVKDGLTDVYNKFHMGNCAENTAKKLSISREEQDGFAITS 211
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +SGL A EIAPV ++ +GKP IIV +DE ++ D +K KL+ F K+ G+
Sbjct: 212 YTRSKAAWDSGLIANEIAPVTIAQ-KGKPDIIVQEDEEYKRVDFSKFPKLKTVFQKDNGT 270
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA N+S ++DGAAALVL++ A L + +A+I FADAA P F AP+ AIPK +
Sbjct: 271 VTAANSSTLNDGAAALVLMTAEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAIPKLL 330
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+ AGL+ I +EINEAFSVV +AN K+L +DP +VN +GGAVSLGHP+G SGARI+
Sbjct: 331 SEAGLKKEDIAMWEINEAFSVVVLANIKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGH 390
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+ LR KG++G+ GICNGGGGASA+++E
Sbjct: 391 MAHALR--KGQFGIAGICNGGGGASAVLIE 418
|
Plays a major role in ketone body metabolism. Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
| >sp|P10551|THIL_SACBA Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 278/400 (69%), Gaps = 10/400 (2%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLL-----VQEVFFGN 66
+++V IV ARTP+G F GSLSS +A +LG+ A++ AL + P L E+ FGN
Sbjct: 2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAAALKGALAKV---PELDASKDFDEIIFGN 58
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQ AL AG+ N +V TT+NKVC+S MKA++L AQSI+ G D+VVAGG
Sbjct: 59 VLSANLGQAPARQVALTAGLGNHIVATTVNKVCASAMKAIILGAQSIKCGNADVVVAGGC 118
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESM+NAP Y+ AR G++ G ++DG+ +DGL D Y+ MGV AE CA ITRD+Q
Sbjct: 119 ESMTNAPYYMPAARGGAKFGQTVLIDGVERDGLNDAYDGLAMGVHAEKCARDWDITRDQQ 178
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DS+AI S+++ +Q G F EI PV + RGKP V DE + KL R
Sbjct: 179 DSFAIESYQKSQQSQKEGKFDNEIVPVTIKGFRGKPDTQVTNDEEPARLHVEKLKSARTV 238
Query: 247 F-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
F +E G+VTA NAS I+DGAAA++LVS E L+ +A ++G+ +AA P FT APS
Sbjct: 239 FQRENGTVTAANASPINDGAAAIILVSERVLKEKNLKPLAIVKGWGEAAHLPADFTWAPS 298
Query: 306 LAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
LA+PKA+ +AG+E + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGC
Sbjct: 299 LAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGC 358
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
SGAR++VTLL +L+ + GK GV ICNGGGGAS++V+E +
Sbjct: 359 SGARVVVTLLSILQQEGGKIGVAAICNGGGGASSVVIEKL 398
|
Catalyzes the formation of acetoacetyl-CoA in the biosynthesis of mevalonate, an intermediate required for the biosynthesis of sterols and nonsterol isoprenoids. Saccharomyces bayanus (taxid: 4931) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | ||||||
| 255563750 | 402 | acetyl-CoA acetyltransferase, mitochondr | 0.968 | 0.997 | 0.853 | 0.0 | |
| 224089557 | 412 | predicted protein [Populus trichocarpa] | 0.992 | 0.997 | 0.864 | 0.0 | |
| 16417944 | 411 | acetyl Co-A acetyltransferase [Hevea bra | 0.983 | 0.990 | 0.845 | 0.0 | |
| 358347094 | 408 | Acetyl-CoA acetyltransferase cytosolic [ | 0.958 | 0.973 | 0.851 | 0.0 | |
| 297794441 | 415 | hypothetical protein ARALYDRAFT_494196 [ | 1.0 | 0.997 | 0.797 | 0.0 | |
| 15238793 | 415 | putative acetyl-CoA acetyltransferase, c | 1.0 | 0.997 | 0.802 | 0.0 | |
| 356565770 | 409 | PREDICTED: probable acetyl-CoA acetyltra | 0.983 | 0.995 | 0.833 | 0.0 | |
| 359497005 | 411 | PREDICTED: probable acetyl-CoA acetyltra | 0.992 | 1.0 | 0.841 | 0.0 | |
| 30695277 | 405 | putative acetyl-CoA acetyltransferase, c | 0.975 | 0.997 | 0.814 | 0.0 | |
| 356522083 | 400 | PREDICTED: probable acetyl-CoA acetyltra | 0.961 | 0.995 | 0.832 | 0.0 |
| >gi|255563750|ref|XP_002522876.1| acetyl-CoA acetyltransferase, mitochondrial, putative [Ricinus communis] gi|223537861|gb|EEF39476.1| acetyl-CoA acetyltransferase, mitochondrial, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/402 (85%), Positives = 375/402 (93%), Gaps = 1/402 (0%)
Query: 4 LEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF 63
+ P++S+K RDVCIVGVARTPMGGFLGSLSS+SATKLGSIAI CAL+RA V P LV+EVF
Sbjct: 1 MAPTDSLKPRDVCIVGVARTPMGGFLGSLSSLSATKLGSIAIHCALERARVDPSLVEEVF 60
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
FGNVLSANLGQAPARQAALGAGIPNSV+CTTINKVC+SGMKA MLAAQ+IQ GINDIVVA
Sbjct: 61 FGNVLSANLGQAPARQAALGAGIPNSVICTTINKVCASGMKATMLAAQTIQAGINDIVVA 120
Query: 124 GGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
GGMESMSNAPKYLAEAR GSRLGHDTI+DGMLKDGLWDVYNDFGMGVCAE+CA++HTITR
Sbjct: 121 GGMESMSNAPKYLAEARNGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAELCADRHTITR 180
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243
+EQDSYAIRSF+RGI+AQN GLF+WEI PVE+S GRG+ I+DKDEGL KFDAAKL KL
Sbjct: 181 EEQDSYAIRSFERGISAQNDGLFSWEIVPVEVSGGRGRLSTIIDKDEGLGKFDAAKLRKL 240
Query: 244 RPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
RPSFKE GSVTAGNAS ISDGAAALVLVSG A++LGLQVIA+I+G+ DAAQAPE FTT
Sbjct: 241 RPSFKEKDGSVTAGNASSISDGAAALVLVSGEMAIKLGLQVIARIKGYGDAAQAPELFTT 300
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
AP+LAIPKAI+NAGL+ SQIDYYEINEAFSVVA+ANQKLLGL+PE+VNAHGGAVSLGHPL
Sbjct: 301 APALAIPKAISNAGLDKSQIDYYEINEAFSVVALANQKLLGLNPEKVNAHGGAVSLGHPL 360
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GCSGARILVTLLGVLRHK GKYGV GICNGGGGASALVLELM
Sbjct: 361 GCSGARILVTLLGVLRHKNGKYGVAGICNGGGGASALVLELM 402
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224089557|ref|XP_002308755.1| predicted protein [Populus trichocarpa] gi|222854731|gb|EEE92278.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/412 (86%), Positives = 389/412 (94%), Gaps = 1/412 (0%)
Query: 4 LEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF 63
+ S+SIK RDVCIVGVARTPMGGFLGSLSS SATKLGSIAI+CAL+RAN+ P LVQEVF
Sbjct: 1 MASSDSIKPRDVCIVGVARTPMGGFLGSLSSFSATKLGSIAIQCALQRANIDPSLVQEVF 60
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
FGNVLSANLGQAPARQAALGAGIPNSV+CTTINKVC+SGMKA MLAAQ+IQLGIND+VVA
Sbjct: 61 FGNVLSANLGQAPARQAALGAGIPNSVICTTINKVCASGMKATMLAAQTIQLGINDVVVA 120
Query: 124 GGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
GGMESMSNAPKYLA+ARKGSRLGHDTIVDGM+KDGLWD+YNDFGMGVCAEICA++H+ITR
Sbjct: 121 GGMESMSNAPKYLADARKGSRLGHDTIVDGMMKDGLWDIYNDFGMGVCAEICADQHSITR 180
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243
D+QDSYAI+SF+RGIAAQNSG +WE+ PVE+S GRGKPF IVDKD+GL KFDAAKL KL
Sbjct: 181 DDQDSYAIQSFERGIAAQNSGHLSWEVVPVEVSGGRGKPFTIVDKDDGLGKFDAAKLRKL 240
Query: 244 RPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
RPSFKE GGSVTAGNAS ISDGAAALVL+SG KAL+LGLQVIAKIRG+ADAAQAPE FTT
Sbjct: 241 RPSFKENGGSVTAGNASSISDGAAALVLMSGEKALKLGLQVIAKIRGYADAAQAPELFTT 300
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
AP+LAIPKAI+NAGLEASQID+YEINEAFSVVA+ANQKLLGL+P++VNAHGGAVSLGHPL
Sbjct: 301 APALAIPKAISNAGLEASQIDFYEINEAFSVVALANQKLLGLNPQKVNAHGGAVSLGHPL 360
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
GCSGARILVTLLGVL+HK GKYGVGGICNGGGGASALVLELMQ RVG S L
Sbjct: 361 GCSGARILVTLLGVLKHKNGKYGVGGICNGGGGASALVLELMQVARVGPSSL 412
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16417944|gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea brasiliensis] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/408 (84%), Positives = 374/408 (91%), Gaps = 1/408 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S+SI RDVCIVGVARTPMGGFLGSLSS SATKLGSIAI+ ALKRANV P LVQEVFFGN
Sbjct: 5 SDSINPRDVCIVGVARTPMGGFLGSLSSFSATKLGSIAIQAALKRANVDPSLVQEVFFGN 64
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTTINKVC+SGMKA MLAA +IQ+GINDIVVAGGM
Sbjct: 65 VLSANLGQAPARQAALGAGIPNSVICTTINKVCASGMKATMLAALTIQVGINDIVVAGGM 124
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSNAPKYLAEAR+GSRLGHDTI+DGMLKDGLWDVYNDFGMGVCAEICA++H ITR+E+
Sbjct: 125 ESMSNAPKYLAEARRGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAEICADQHNITREEK 184
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAIRSF+RG +AQN G+F+WEI PVE+S GRGK ++VDKDEGL KFDAAKL KLRP
Sbjct: 185 DSYAIRSFERGNSAQNGGVFSWEIVPVEVSGGRGKSVMVVDKDEGLIKFDAAKLRKLRP- 243
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
GSVTAGNASIISDGAAALVLVSG KA+ELGLQVIA+IRG+ DAAQAPE FTTAP+L
Sbjct: 244 ISRIGSVTAGNASIISDGAAALVLVSGEKAIELGLQVIARIRGYGDAAQAPELFTTAPAL 303
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AIPKAI+NAGLEASQIDYYEINEAFSVVA+ANQK+LGL+PE++N HGGAVSLGHPLGCSG
Sbjct: 304 AIPKAISNAGLEASQIDYYEINEAFSVVALANQKILGLNPEKLNVHGGAVSLGHPLGCSG 363
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
ARILVTLLGVLRHK GKYGV ICNGGGGASALVLELM RVG S L
Sbjct: 364 ARILVTLLGVLRHKNGKYGVASICNGGGGASALVLELMSVGRVGRSLL 411
|
Source: Hevea brasiliensis Species: Hevea brasiliensis Genus: Hevea Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358347094|ref|XP_003637597.1| Acetyl-CoA acetyltransferase cytosolic [Medicago truncatula] gi|355503532|gb|AES84735.1| Acetyl-CoA acetyltransferase cytosolic [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/398 (85%), Positives = 368/398 (92%), Gaps = 1/398 (0%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
S K+RDVCIVGV RTPMGGFLGSLSS+SAT LGS+AI+ ALKRANV P LVQEVFFGNVL
Sbjct: 2 SSKSRDVCIVGVGRTPMGGFLGSLSSLSATHLGSLAIKAALKRANVDPSLVQEVFFGNVL 61
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
SANLGQAPARQAALGAGIP SV+CTTINKVCSSGMKA MLAAQ+IQLG ND+VV GGMES
Sbjct: 62 SANLGQAPARQAALGAGIPTSVICTTINKVCSSGMKATMLAAQTIQLGSNDVVVVGGMES 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MSNAPKY+AEARKGSRLGHDTI+DGMLKDGLWDVYNDFGMGVCAE+CA++H ITRD+QDS
Sbjct: 122 MSNAPKYIAEARKGSRLGHDTIIDGMLKDGLWDVYNDFGMGVCAEMCADQHAITRDQQDS 181
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248
YAI+SF+RGI+AQN G FAWEI PVE+ SGRGKP +VDKDEGL KFDAAKL KL P+FK
Sbjct: 182 YAIQSFERGISAQNGGHFAWEIVPVEIFSGRGKPSTLVDKDEGLGKFDAAKLRKLGPNFK 241
Query: 249 E-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLA 307
+ GG+VTAGNAS ISDGAAALVLVS KA ELGL VIAKI+GFADAAQAPE+FTTAP+LA
Sbjct: 242 KVGGTVTAGNASSISDGAAALVLVSEKKAHELGLHVIAKIKGFADAAQAPEFFTTAPALA 301
Query: 308 IPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
IPKAI+NAGLEASQIDYYEINEAFS VA+ANQKLLGLDPE++N HGGAVSLGHPLGCSGA
Sbjct: 302 IPKAISNAGLEASQIDYYEINEAFSAVALANQKLLGLDPEKLNVHGGAVSLGHPLGCSGA 361
Query: 368 RILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405
RILVTLLGVLRHK GKYGVG ICNGGGGASALV+ELMQ
Sbjct: 362 RILVTLLGVLRHKGGKYGVGAICNGGGGASALVVELMQ 399
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794441|ref|XP_002865105.1| hypothetical protein ARALYDRAFT_494196 [Arabidopsis lyrata subsp. lyrata] gi|297310940|gb|EFH41364.1| hypothetical protein ARALYDRAFT_494196 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/415 (79%), Positives = 378/415 (91%), Gaps = 1/415 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+GGFLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPHVSDDSLQPRDVCVVGVARTPIGGFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+ND+
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDV 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHD++VDGM+KDGLWDVYNDFGMGVC EICA++H
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDSVVDGMMKDGLWDVYNDFGMGVCGEICADQHH 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAA N+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAHNTQLFAWEIVPVEVSTGRGRPLVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKQAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASA+VLE M +G+S L
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASAIVLEFMSEKTIGYSAL 415
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15238793|ref|NP_199583.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|186530176|ref|NP_974901.2| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|73919864|sp|Q9FIK7.1|THIC2_ARATH RecName: Full=Probable acetyl-CoA acetyltransferase, cytosolic 2; AltName: Full=Cytosolic acetoacetyl-CoA thiolase 2; Short=Thiolase 2 gi|10177908|dbj|BAB11319.1| acetoacyl-CoA-thiolase [Arabidopsis thaliana] gi|21618008|gb|AAM67058.1| acetoacyl-CoA-thiolase [Arabidopsis thaliana] gi|119935899|gb|ABM06028.1| At5g47720 [Arabidopsis thaliana] gi|222423167|dbj|BAH19561.1| AT5G47720 [Arabidopsis thaliana] gi|332008176|gb|AED95559.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|332008177|gb|AED95560.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/415 (80%), Positives = 378/415 (91%), Gaps = 1/415 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASALVLE M +G+S L
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFMSEKTIGYSAL 415
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565770|ref|XP_003551110.1| PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/409 (83%), Positives = 374/409 (91%), Gaps = 2/409 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S +K+RDVCIVGVARTP+GG LG+LSS+SAT+LGSIAI+ ALKRANV P LVQEVFFGN
Sbjct: 2 STCVKSRDVCIVGVARTPIGGLLGTLSSLSATELGSIAIKTALKRANVDPSLVQEVFFGN 61
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIP SV+CTTINKVC+SGMKA MLAA +IQ G+ND+VVAGGM
Sbjct: 62 VLSANLGQAPARQAALGAGIPTSVICTTINKVCASGMKATMLAALTIQFGLNDVVVAGGM 121
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSNAPKY+AEARKGSR GHDTI+DGM+KDGLWDVYN+FGMGVCAE+CA++H ITRDEQ
Sbjct: 122 ESMSNAPKYIAEARKGSRYGHDTIIDGMVKDGLWDVYNNFGMGVCAELCADQHVITRDEQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAIRSF+RGI+AQN+G FAWEI PVE+S+GRG+ IVDKDEGL KFDAAKL KLRPS
Sbjct: 182 DSYAIRSFERGISAQNAGHFAWEIVPVEVSTGRGRASKIVDKDEGLGKFDAAKLRKLRPS 241
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GGSVTAGNAS ISDGAAALVLVS KA ELGL VIAKI+G+ DAA+APE FTTAPS
Sbjct: 242 FKEVGGSVTAGNASSISDGAAALVLVSEEKARELGLHVIAKIKGYGDAAKAPELFTTAPS 301
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAI+NAGL+ASQIDYYEINEAFSVVA+ANQKLLGLDPE+VNAHGGAVSLGHPLGCS
Sbjct: 302 LAIPKAISNAGLDASQIDYYEINEAFSVVALANQKLLGLDPEKVNAHGGAVSLGHPLGCS 361
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
GARILVTLLGVLR K+GKYGV ICNGGGGASALVLELM V VG S L
Sbjct: 362 GARILVTLLGVLRQKRGKYGVAAICNGGGGASALVLELMP-VAVGRSLL 409
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359497005|ref|XP_003635396.1| PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2-like [Vitis vinifera] gi|297741869|emb|CBI33249.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/411 (84%), Positives = 379/411 (92%)
Query: 4 LEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF 63
+ P +SIK RDVCIVGVARTPMGGFLG LSS+SATKLGSIAI AL+RAN+ P LVQEVF
Sbjct: 1 MAPHDSIKPRDVCIVGVARTPMGGFLGFLSSLSATKLGSIAIRGALRRANIDPSLVQEVF 60
Query: 64 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVA 123
FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVC+SGMKA+M AAQSIQLG+ND+VVA
Sbjct: 61 FGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCASGMKAIMFAAQSIQLGVNDVVVA 120
Query: 124 GGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
GGMESMSNAPKYL AR GSRLGHDTIVDGM+KDGLWDVYNDFGMG+CAEICA++HTITR
Sbjct: 121 GGMESMSNAPKYLVYARNGSRLGHDTIVDGMIKDGLWDVYNDFGMGICAEICADQHTITR 180
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243
+EQDSY+I+SF+RGI+AQN+G FAWEI PVE+S GRGKP +VDKDEGL KFDAAKL KL
Sbjct: 181 EEQDSYSIQSFERGISAQNNGAFAWEIIPVEVSGGRGKPSTLVDKDEGLGKFDAAKLRKL 240
Query: 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTA 303
RPSFK+GGSVTAGNAS ISDGAAALVLVSG KA+EL LQVIAKI G+ DAAQAPE FTT
Sbjct: 241 RPSFKDGGSVTAGNASSISDGAAALVLVSGKKAVELRLQVIAKIAGYGDAAQAPELFTTT 300
Query: 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLG 363
P+LAIPKAI+NAGL+ASQIDYYEINEAF+VVA+ANQKLLGLDPE+VN HGGAVSLGHP+G
Sbjct: 301 PALAIPKAISNAGLKASQIDYYEINEAFAVVALANQKLLGLDPEKVNVHGGAVSLGHPIG 360
Query: 364 CSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVGHSKL 414
CSGARILVTLLG+LR K GKYGVGGICNGGGGASALVLELM R+GHSKL
Sbjct: 361 CSGARILVTLLGILRQKNGKYGVGGICNGGGGASALVLELMPVARLGHSKL 411
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30695277|ref|NP_851150.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|42573608|ref|NP_974900.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|332008175|gb|AED95558.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] gi|332008178|gb|AED95561.1| putative acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 373/405 (92%), Gaps = 1/405 (0%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HPLGCSGARILVTLLGVLR KKGKYGV ICNGGGGASALVLE M
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522083|ref|XP_003529679.1| PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/399 (83%), Positives = 366/399 (91%), Gaps = 1/399 (0%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S S K+RDVCIVGVARTP+GG LG+LSS+SAT+LGSIAI+ AL+RANV P LVQEVFFGN
Sbjct: 2 STSAKSRDVCIVGVARTPIGGLLGTLSSLSATELGSIAIKSALERANVDPSLVQEVFFGN 61
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIP SV+CTTINKVC+SGMKA MLAA +IQ G+ND+VVAGGM
Sbjct: 62 VLSANLGQAPARQAALGAGIPTSVICTTINKVCASGMKATMLAALTIQFGLNDVVVAGGM 121
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSNAPKYLAEARKGSR GHDTI+DGM+KDGLWDVYN+FGMG CAE+CA++H ITRDEQ
Sbjct: 122 ESMSNAPKYLAEARKGSRYGHDTIIDGMVKDGLWDVYNNFGMGACAELCADQHVITRDEQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
DSYAIRSF+RGI+AQN+G FAWEI PVE+S+GRG+ IVDKDEGL KFDAAKL KLRPS
Sbjct: 182 DSYAIRSFERGISAQNAGHFAWEIVPVEVSTGRGRASTIVDKDEGLGKFDAAKLRKLRPS 241
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GGSVTAGNAS ISDGAAALVLVS KA ELGL VIAKI+G+ DAA+APE FTTAPS
Sbjct: 242 FKEVGGSVTAGNASSISDGAAALVLVSEEKARELGLHVIAKIKGYGDAAKAPELFTTAPS 301
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAI+NAGL+ASQIDYYEINEAFSVVA+ANQKLL L+PE+VN +GGAVSLGHPLGCS
Sbjct: 302 LAIPKAISNAGLDASQIDYYEINEAFSVVALANQKLLALNPEKVNVYGGAVSLGHPLGCS 361
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARILVTLLGVLR K+GKYGV ICNGGGGASALVLELM
Sbjct: 362 GARILVTLLGVLRQKRGKYGVAAICNGGGGASALVLELM 400
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | ||||||
| TAIR|locus:2160887 | 415 | AACT1 "AT5G47720" [Arabidopsis | 1.0 | 0.997 | 0.773 | 3.2e-168 | |
| TAIR|locus:2164778 | 403 | ACAT2 "AT5G48230" [Arabidopsis | 0.961 | 0.987 | 0.779 | 1e-162 | |
| UNIPROTKB|G4N745 | 401 | MGG_13499 "Acetyl-CoA acetyltr | 0.944 | 0.975 | 0.578 | 1.9e-113 | |
| POMBASE|SPBC215.09c | 395 | erg10 "acetyl-CoA C-acetyltran | 0.939 | 0.984 | 0.570 | 2.3e-110 | |
| ASPGD|ASPL0000042368 | 399 | AN1409 [Emericella nidulans (t | 0.937 | 0.972 | 0.566 | 3.1e-106 | |
| CGD|CAL0005678 | 402 | ERG10 [Candida albicans (taxid | 0.937 | 0.965 | 0.520 | 1.2e-99 | |
| DICTYBASE|DDB_G0271544 | 414 | acat "acetoacetyl-CoA thiolase | 0.934 | 0.934 | 0.510 | 1.4e-96 | |
| SGD|S000005949 | 398 | ERG10 "Acetyl-CoA C-acetyltran | 0.939 | 0.977 | 0.506 | 2.3e-94 | |
| UNIPROTKB|F1PC58 | 416 | ACAT1 "Uncharacterized protein | 0.927 | 0.923 | 0.5 | 6.3e-92 | |
| UNIPROTKB|J9JHD4 | 433 | ACAT1 "Uncharacterized protein | 0.927 | 0.886 | 0.5 | 6.3e-92 |
| TAIR|locus:2160887 AACT1 "AT5G47720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1636 (581.0 bits), Expect = 3.2e-168, P = 3.2e-168
Identities = 321/415 (77%), Positives = 366/415 (88%)
Query: 1 MVPLEPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ 60
M P +S++ RDVC+VGVARTP+G FLGSLSS++AT+LGSIAI+ ALKRA+V P LV+
Sbjct: 1 MAPPVSDDSLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVE 60
Query: 61 EVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDI 120
EVFFGNVL+ANLGQAPARQAALGAGIP SV+CTTINKVC++GMK+VMLA+QSIQLG+NDI
Sbjct: 61 EVFFGNVLTANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDI 120
Query: 121 VVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180
VVAGGMESMSN PKYL +AR+GSRLGHDT+VDGM+KDGLWDVYNDFGMGVC EICA+++
Sbjct: 121 VVAGGMESMSNVPKYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYR 180
Query: 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL 240
ITR+EQD+YAI+SF+RGIAAQN+ LFAWEI PVE+S+GRG+P +++DKDEGL KFDAAKL
Sbjct: 181 ITREEQDAYAIQSFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKL 240
Query: 241 MKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
KLRPSFKE GGSVTAGNAS ISDGAAALVLVSG KALELGL VIAKIRG+ADAAQAPE
Sbjct: 241 KKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPEL 300
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
FTT P+LAIPKAI AGL+ASQ+DYYEINEAFSVVA+ANQKLLGLDPE++NAHGGAVSLG
Sbjct: 301 FTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLG 360
Query: 360 HPLGCSGARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLELMQAVRVGHSKL 414
HPLGCSGARILVTLLGVLR KK ASALVLE M +G+S L
Sbjct: 361 HPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFMSEKTIGYSAL 415
|
|
| TAIR|locus:2164778 ACAT2 "AT5G48230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1584 (562.7 bits), Expect = 1.0e-162, P = 1.0e-162
Identities = 311/399 (77%), Positives = 350/399 (87%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
SES+ RDVCIVGVARTPMGGFLGSLSS+ ATKLGS+AI ALKRANV P LVQEV FGN
Sbjct: 5 SESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGN 64
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VLSANLGQAPARQAALGAGIPNSV+CTT+NKVC+SGMKAVM+AAQSIQLGIND+VVAGGM
Sbjct: 65 VLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGM 124
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN PKYLAEARKGSR GHD++VDGMLKDGLWDVYND GMG CAE+CA K ITR++Q
Sbjct: 125 ESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQ 184
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D YA++SF+RGIAAQ +G F WEI PVE+S GRG+P IVDKDEGL KFDAAKL KLRPS
Sbjct: 185 DDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPS 244
Query: 247 FKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
FKE GG+VTAGNAS ISDGAAALVLVSG KAL+LGL V+AKI+G+ DAAQ PE+FTTAP+
Sbjct: 245 FKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFFTTAPA 304
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
LAIPKAIA+AGLE+SQ+DYYEINEAF+VVA+ANQKLLG+ PE+VN +GGAVSLGHPLGCS
Sbjct: 305 LAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCS 364
Query: 366 GARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLELM 404
GARIL+TLLG+L+ + ASALVLEL+
Sbjct: 365 GARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403
|
|
| UNIPROTKB|G4N745 MGG_13499 "Acetyl-CoA acetyltransferase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 228/394 (57%), Positives = 292/394 (74%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANLG 73
V I VARTP+G FLGSLSS+SAT+LGS AI+ A+ R +KP V+EVFFGNVLSAN+G
Sbjct: 8 VYIAAVARTPVGSFLGSLSSLSATQLGSHAIKSAVSRVPEIKPEDVEEVFFGNVLSANVG 67
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ A+GAG+ NSV CTT+NKVC+SGMKA++L AQ+I G IVVAGG ESMSN P
Sbjct: 68 QAPARQCAIGAGLSNSVSCTTVNKVCASGMKAIILGAQTIMTGNASIVVAGGTESMSNTP 127
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG-MGVCAEICANKHTITRDEQDSYAIR 192
YLA +R G++ G T++DG+ KDGL D Y MGV AE+C+ H ++R+ QD YAI+
Sbjct: 128 HYLATSRSGTKYGDQTLIDGIQKDGLRDAYGKKELMGVAAELCSVDHELSREAQDEYAIK 187
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251
+++ AA +G+F EIAP+E+S GRGKP + VD+DE ++ + KL RP+F+ GG
Sbjct: 188 CYQKAQAATEAGVFKAEIAPIEVSGGRGKPNVTVDRDEEVKNLNIEKLKSARPAFQTTGG 247
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+VTA NAS I+DGAAA+VLVS K ELG++ +AKI G+ DAA+ PE FTTAP+LAIPKA
Sbjct: 248 TVTAPNASPINDGAAAVVLVSEAKLKELGIKPLAKILGWGDAAREPERFTTAPALAIPKA 307
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
I +AG+E +D+YEINEAFSVVA+AN K+L LDPE VN GG+V++GHPLGCSGARI+
Sbjct: 308 IKHAGIEQKDVDFYEINEAFSVVALANMKILNLDPETVNVFGGSVAIGHPLGCSGARIVT 367
Query: 372 TLLGVLRHKKXXXXXXXXXXXXXXASALVLELMQ 405
TL VL+ KK ASA+V+E +Q
Sbjct: 368 TLTTVLKEKKGKIGCAGICNGGGGASAIVIENLQ 401
|
|
| POMBASE|SPBC215.09c erg10 "acetyl-CoA C-acetyltransferase Erg10 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 222/389 (57%), Positives = 283/389 (72%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV RTPMG F GS +S+ ATKLGSIAI+ AL+R N+KP V EVF GNV+SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQ ALGAG+P S+VCTT+NKVC+SGMKA +L AQ+I G +IVVAGG ESMSNAP
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y + R G++ G+ +VDG+L+DGL D Y+ MG AE+CA +H+I R QD++AI S
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISS 184
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253
+KR AQ + F EI PVE+ GRGKP +V +DE + + KL +R FK G+V
Sbjct: 185 YKRAQNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVFKSNGTV 244
Query: 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIA 313
TA NAS ++DGA+ALVL+S K ELGL+ +AKI G+ +AAQ PE FTT+PSLAIPKA+
Sbjct: 245 TAANASTLNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALK 304
Query: 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTL 373
+AG+EASQ+DYYEINEAFSVVA+AN K+LGLDPE+VN +GG V++GHPLG SG+RI+ TL
Sbjct: 305 HAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTL 364
Query: 374 LGVLRHKKXXXXXXXXXXXXXXASALVLE 402
+L K AS++V+E
Sbjct: 365 AYILAQKDAKIGVAAVCNGGGGASSIVIE 393
|
|
| ASPGD|ASPL0000042368 AN1409 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 221/390 (56%), Positives = 283/390 (72%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G FLGSLSS +A +LGS AI+ AL+RA+ +KP VQEVFFGNVLSAN+G
Sbjct: 7 VYIVSYARTPVGSFLGSLSSQTAPQLGSHAIKAALERADGIKPSDVQEVFFGNVLSANVG 66
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQ ALGAG+ S VCTT+NKVC+SG+KAV+L AQ+I G D+VVAGG ESMSN P
Sbjct: 67 QNPARQCALGAGLETSTVCTTVNKVCASGLKAVILGAQTIMTGNADVVVAGGTESMSNTP 126
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL R G++ G+ T+VDG++KDGL DV MG+ AE CA H R +QD YAIRS
Sbjct: 127 HYLPNLRTGAKYGNQTMVDGIVKDGLTDVGKQELMGLQAEECAQDHGFNRQQQDDYAIRS 186
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG-GS 252
+++ AAQ +GLF EIAP+++ RGKP + V +D+ + + KL ++P+F G G+
Sbjct: 187 YEKAQAAQAAGLFNDEIAPIDLPGFRGKPGVTVTQDDEPKNLNPDKLRAMKPAFIPGTGT 246
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA N+S ++DGAAA+VLVS K EL L+ +AKI G+ +AAQ P FTTAP+LAIP+A+
Sbjct: 247 VTAPNSSPLNDGAAAVVLVSEAKLKELNLKPVAKILGWGEAAQQPSKFTTAPALAIPRAL 306
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AG+ +D +EINEAFSVVA+AN KLLGL ++VN HGGAV++GHPLG SGARIL T
Sbjct: 307 KHAGVSQDAVDAFEINEAFSVVALANLKLLGLSEDKVNIHGGAVAIGHPLGASGARILTT 366
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
LLGVL+ +K ASALV+E
Sbjct: 367 LLGVLKARKGKVGCAGICNGGGGASALVVE 396
|
|
| CGD|CAL0005678 ERG10 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 203/390 (52%), Positives = 274/390 (70%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANLG 73
V IV ARTP+G F G+LSS++ + LG+ A++ AL + +KP V E+ FG VL AN+G
Sbjct: 5 VYIVSTARTPIGSFQGTLSSLTYSDLGAHAVKAALNKVPQIKPEDVDEIVFGGVLQANVG 64
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAPARQ AL AG+ + +V +T+NKVC+SG+KA+++ AQ+I G +DIVV GG ESM+N P
Sbjct: 65 QAPARQVALKAGLTDKIVASTVNKVCASGLKAIIIGAQNIICGTSDIVVVGGAESMTNTP 124
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
YL AR G+R G T++DG+ KDGL DVY MGV AE CA H TR++QD +AI+S
Sbjct: 125 YYLPTARNGARFGDSTLIDGIQKDGLLDVYEQKLMGVAAEKCAADHGFTREQQDEFAIKS 184
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+++ A G F EIAPV + RGKP ++V+KDE +EKF+ AKL R F KE G+
Sbjct: 185 YQKAGNALKQGKFNQEIAPVTIKGVRGKPDVVVEKDEEIEKFNEAKLKSARAVFQKENGT 244
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VT NAS I+DGAAAL+LVS K ELGL+ +AKI G+ +AA+ P FT AP+LA+PKA+
Sbjct: 245 VTGPNASKINDGAAALILVSEAKLKELGLKPLAKINGWGEAARNPIDFTIAPALAVPKAV 304
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL Q+D++E+NEAFSVV +AN ++ + E++NA+GGAV+LGHPLGCSGARI+VT
Sbjct: 305 KHAGLTLDQVDFFELNEAFSVVGLANAEICQIPLEKLNAYGGAVALGHPLGCSGARIVVT 364
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
LL VL + AS++V+E
Sbjct: 365 LLSVLIQEGGKIGCAGVCNGGGGASSIVIE 394
|
|
| DICTYBASE|DDB_G0271544 acat "acetoacetyl-CoA thiolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 198/388 (51%), Positives = 265/388 (68%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
V IV RTP+G GSLS++ TKL SI IE A+KRA +KP V E GNV+SANLGQ
Sbjct: 26 VVIVSAVRTPIGSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQ 85
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
APARQ ALGAG+ + TTINKVCSSGMKA++ AQSI LG + VVAGG ESMS P
Sbjct: 86 APARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMSQVPY 145
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
Y + R G++ G+ T +DG+++DGL D YN MGVC + CA+K+ ITR++QD +A+ S+
Sbjct: 146 YADKMRFGAKYGNQTFIDGLVRDGLADAYNGSAMGVCGDDCADKYKITREQQDKFAVDSY 205
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254
R + AQ +G F EI V + GRG V +DE +K K+ L+P+F G+VT
Sbjct: 206 LRALEAQKNGFFNDEIVQVPIV-GRGGKVTYVVEDEEPKKVLFDKIPNLKPAFTPNGTVT 264
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
NAS ++DGA++++L+S A ELGL+ +A+I G+ADA QAP F TAP+LAIPKA+ N
Sbjct: 265 PANASKLNDGASSVILMSESHAKELGLKPLARIIGYADAEQAPIEFPTAPALAIPKALKN 324
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AG+ SQ+D +EINEAF+VV +AN K+L +D ++N +GGAV+LGHP+G SG RI+VTL
Sbjct: 325 AGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLT 384
Query: 375 GVLRHKKXXXXXXXXXXXXXXASALVLE 402
+L++K ++ALVLE
Sbjct: 385 HLLQNKNLKYGVAAICNGGGGSTALVLE 412
|
|
| SGD|S000005949 ERG10 "Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase)" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 201/397 (50%), Positives = 268/397 (67%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQ----EVFFGNV 67
+++V IV ARTP+G F GSLSS +A +LG++A++ AL A V L E+ FGNV
Sbjct: 2 SQNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGAL--AKVPELDASKDFDEIIFGNV 59
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
LSANLGQAPARQ AL AG+ N +V +T+NKVC+S MKA++L AQSI+ G D+VVAGG E
Sbjct: 60 LSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCE 119
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
SM+NAP Y+ AR G++ G +VDG+ +DGL D Y+ MGV AE CA ITR++QD
Sbjct: 120 SMTNAPYYMPAARAGAKFGQTVLVDGVERDGLNDAYDGLAMGVHAEKCARDWDITREQQD 179
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247
++AI S+++ +Q G F EI PV + RGKP V KDE + KL R F
Sbjct: 180 NFAIESYQKSQKSQKEGKFDNEIVPVTIKGFRGKPDTQVTKDEEPARLHVEKLRSARTVF 239
Query: 248 -KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
KE G+VTA NAS I+DGAAA++LVS E L+ +A I+G+ +AA P FT APSL
Sbjct: 240 QKENGTVTAANASPINDGAAAVILVSEKVLKEKNLKPLAIIKGWGEAAHQPADFTWAPSL 299
Query: 307 AIPKAIANAGLE-ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
A+PKA+ +AG+E + +DY+E NEAFSVV + N K+L LDP +VN +GGAV+LGHPLGCS
Sbjct: 300 AVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCS 359
Query: 366 GARILVTLLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
GAR++VTLL +L+ + AS++V+E
Sbjct: 360 GARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIE 396
|
|
| UNIPROTKB|F1PC58 ACAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 195/390 (50%), Positives = 269/390 (68%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV ARTP+G FLGSLSS+ ATKLGSIAI+ +++A + V+E + GNVL G
Sbjct: 30 EVVIVSAARTPIGSFLGSLSSLPATKLGSIAIQGVIEKAGIPKEEVKEAYMGNVLQGGEG 89
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP RQAALGAG+P S CTT+NKVC+SGMKA+M+A+QS+ G D++VAGGMESMSN P
Sbjct: 90 QAPTRQAALGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVP 149
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y+ +R + G + D ++KDGL DVYN MG CAE A K ITR+EQD+YA+ S
Sbjct: 150 -YVM-SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNITREEQDTYALSS 207
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +G F E+ PV +++ +GKP ++V +DE ++ D +K+ KL+ F KE G+
Sbjct: 208 YTRSKAAWEAGRFGSEVIPVTVTT-KGKPDVLVTEDEEYKRVDFSKVPKLKTVFQKENGT 266
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DGAAA+VL++ A L ++ +A++ FADAA P F AP+ A+PK +
Sbjct: 267 VTAANASTLNDGAAAVVLMTADAARRLKVKPLARVAAFADAAVEPIDFPVAPAYAVPKVL 326
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL+ I +E+NEAFS+V +AN K+L LDP++VN +GGAVSLGHP+G SGARI+V
Sbjct: 327 RDAGLKKEDITMWEVNEAFSLVVLANIKMLDLDPQKVNMNGGAVSLGHPIGMSGARIVVH 386
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
L+ L K+ ASAL+++
Sbjct: 387 LVHAL--KQGEYGLASICNGGGGASALLIQ 414
|
|
| UNIPROTKB|J9JHD4 ACAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 195/390 (50%), Positives = 269/390 (68%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+V IV ARTP+G FLGSLSS+ ATKLGSIAI+ +++A + V+E + GNVL G
Sbjct: 47 EVVIVSAARTPIGSFLGSLSSLPATKLGSIAIQGVIEKAGIPKEEVKEAYMGNVLQGGEG 106
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
QAP RQAALGAG+P S CTT+NKVC+SGMKA+M+A+QS+ G D++VAGGMESMSN P
Sbjct: 107 QAPTRQAALGAGLPISTPCTTVNKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVP 166
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
Y+ +R + G + D ++KDGL DVYN MG CAE A K ITR+EQD+YA+ S
Sbjct: 167 -YVM-SRGATPYGGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKMNITREEQDTYALSS 224
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF-KEGGS 252
+ R AA +G F E+ PV +++ +GKP ++V +DE ++ D +K+ KL+ F KE G+
Sbjct: 225 YTRSKAAWEAGRFGSEVIPVTVTT-KGKPDVLVTEDEEYKRVDFSKVPKLKTVFQKENGT 283
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTA NAS ++DGAAA+VL++ A L ++ +A++ FADAA P F AP+ A+PK +
Sbjct: 284 VTAANASTLNDGAAAVVLMTADAARRLKVKPLARVAAFADAAVEPIDFPVAPAYAVPKVL 343
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
+AGL+ I +E+NEAFS+V +AN K+L LDP++VN +GGAVSLGHP+G SGARI+V
Sbjct: 344 RDAGLKKEDITMWEVNEAFSLVVLANIKMLDLDPQKVNMNGGAVSLGHPIGMSGARIVVH 403
Query: 373 LLGVLRHKKXXXXXXXXXXXXXXASALVLE 402
L+ L K+ ASAL+++
Sbjct: 404 LVHAL--KQGEYGLASICNGGGGASALLIQ 431
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P46707 | FADA4_MYCLE | 2, ., 3, ., 1, ., 9 | 0.4458 | 0.9323 | 0.9821 | yes | no |
| A0R1Y7 | FADA4_MYCS2 | 2, ., 3, ., 1, ., 9 | 0.4559 | 0.9275 | 0.9896 | yes | no |
| P66926 | FADA4_MYCTU | 2, ., 3, ., 1, ., 9 | 0.4496 | 0.9299 | 0.9897 | yes | no |
| Q6GJW4 | THLA_STAAR | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9299 | 0.9796 | yes | no |
| Q5BKN8 | THIL_XENTR | 2, ., 3, ., 1, ., 9 | 0.5410 | 0.9275 | 0.9142 | yes | no |
| P66927 | FADA4_MYCBO | 2, ., 3, ., 1, ., 9 | 0.4496 | 0.9299 | 0.9897 | yes | no |
| P17764 | THIL_RAT | 2, ., 3, ., 1, ., 9 | 0.5205 | 0.9275 | 0.9056 | yes | no |
| Q2YVF5 | THLA_STAAB | 2, ., 3, ., 1, ., 9 | 0.4536 | 0.9299 | 0.9796 | yes | no |
| P45369 | THIL_ALLVD | 2, ., 3, ., 1, ., 9 | 0.4478 | 0.9444 | 0.9923 | yes | no |
| Q8HXY6 | THIL_MACFA | 2, ., 3, ., 1, ., 9 | 0.5012 | 0.9251 | 0.8969 | N/A | no |
| Q6GN02 | THILB_XENLA | 2, ., 3, ., 1, ., 9 | 0.5410 | 0.9275 | 0.9142 | N/A | no |
| P10551 | THIL_SACBA | 2, ., 3, ., 1, ., 9 | 0.525 | 0.9420 | 0.9798 | N/A | no |
| Q8QZT1 | THIL_MOUSE | 2, ., 3, ., 1, ., 9 | 0.5153 | 0.9275 | 0.9056 | yes | no |
| Q99WM3 | THLA_STAAM | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9299 | 0.9796 | yes | no |
| P24752 | THIL_HUMAN | 2, ., 3, ., 1, ., 9 | 0.5063 | 0.9251 | 0.8969 | yes | no |
| Q12598 | THIA_CANTR | 2, ., 3, ., 1, ., 9 | 0.5456 | 0.9468 | 0.9727 | N/A | no |
| Q2G124 | THLA_STAA8 | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9299 | 0.9796 | yes | no |
| Q7A7L2 | THLA_STAAN | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9299 | 0.9796 | yes | no |
| P44873 | ATOB_HAEIN | 2, ., 3, ., 1, ., 9 | 0.4961 | 0.9347 | 0.9847 | yes | no |
| P41338 | THIL_YEAST | 2, ., 3, ., 1, ., 9 | 0.5301 | 0.9371 | 0.9748 | yes | no |
| Q5HS07 | THLA_STAEQ | 2, ., 3, ., 1, ., 9 | 0.4514 | 0.9130 | 0.9593 | yes | no |
| Q6AZA0 | THIL_DANRE | 2, ., 3, ., 1, ., 9 | 0.5282 | 0.9275 | 0.9142 | yes | no |
| Q6GCB8 | THLA_STAAS | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9299 | 0.9796 | yes | no |
| Q8S4Y1 | THIC1_ARATH | 2, ., 3, ., 1, ., 9 | 0.8120 | 0.9613 | 0.9875 | no | no |
| Q6NU46 | THILA_XENLA | 2, ., 3, ., 1, ., 9 | 0.5384 | 0.9275 | 0.9142 | N/A | no |
| P45855 | THL_BACSU | 2, ., 3, ., 1, ., 9 | 0.4311 | 0.9420 | 0.9923 | yes | no |
| Q9UQW6 | THIL_SCHPO | 2, ., 3, ., 1, ., 9 | 0.5938 | 0.9396 | 0.9848 | yes | no |
| Q86AD9 | THIL1_DICDI | 2, ., 3, ., 1, ., 9 | 0.5386 | 0.9347 | 0.9347 | yes | no |
| Q9FIK7 | THIC2_ARATH | 2, ., 3, ., 1, ., 9 | 0.8024 | 1.0 | 0.9975 | yes | no |
| Q04677 | THIB_CANTR | 2, ., 3, ., 1, ., 9 | 0.5435 | 0.9371 | 0.9627 | N/A | no |
| Q8CQN7 | THLA_STAES | 2, ., 3, ., 1, ., 9 | 0.4514 | 0.9130 | 0.9593 | yes | no |
| Q5HIU0 | THLA_STAAC | 2, ., 3, ., 1, ., 9 | 0.4536 | 0.9299 | 0.9796 | yes | no |
| Q8NY95 | THLA_STAAW | 2, ., 3, ., 1, ., 9 | 0.4510 | 0.9299 | 0.9796 | yes | no |
| Q29RZ0 | THIL_BOVIN | 2, ., 3, ., 1, ., 9 | 0.5179 | 0.9275 | 0.9099 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1.9 | 0.979 |
| 3rd Layer | 2.3.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 414 | |||
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 0.0 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 1e-180 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-167 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-150 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 1e-137 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 1e-135 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 1e-114 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 1e-110 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 1e-105 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 1e-103 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 1e-103 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 5e-90 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 8e-88 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 1e-86 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 2e-86 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 2e-81 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 2e-81 | |
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 1e-79 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 5e-78 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 1e-76 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 3e-76 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 5e-72 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 4e-71 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 2e-70 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 2e-69 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 2e-69 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 2e-66 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 6e-66 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 8e-64 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 1e-60 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 3e-56 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 1e-55 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 5e-51 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 2e-47 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 3e-47 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 5e-46 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 1e-36 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 4e-16 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 5e-13 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 1e-09 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-08 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 2e-07 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 6e-07 | |
| PRK06157 | 398 | PRK06157, PRK06157, acetyl-CoA acetyltransferase; | 9e-07 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 1e-06 | |
| PRK07516 | 389 | PRK07516, PRK07516, acetyl-CoA acetyltransferase; | 1e-06 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 1e-06 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 2e-06 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 2e-05 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 3e-05 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-04 | |
| PRK07937 | 352 | PRK07937, PRK07937, lipid-transfer protein; Provis | 1e-04 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 2e-04 | |
| PRK06289 | 403 | PRK06289, PRK06289, acetyl-CoA acetyltransferase; | 2e-04 | |
| CHL00203 | 326 | CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn | 3e-04 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 5e-04 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 742 bits (1917), Expect = 0.0
Identities = 332/394 (84%), Positives = 368/394 (93%), Gaps = 1/394 (0%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RDVCIVGVARTP+GGFLGSLSS+SAT+LGSIAI+ AL+RA V P LVQEVFFGNVLSANL
Sbjct: 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL 60
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQAPARQAALGAG+P S +CTT+NKVC+SGMKAVMLAAQSIQLGIND+VVAGGMESMSNA
Sbjct: 61 GQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNA 120
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
PKYL EARKGSRLGHDT+VDGMLKDGLWDVYNDFGMGVCAE+CA++++I+R+EQD+YAI+
Sbjct: 121 PKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQ 180
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251
S++R IAAQ +G FAWEI PVE+ GRG+P +IVDKDEGL KFD AKL KLRPSFKE GG
Sbjct: 181 SYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
SVTAGNAS ISDGAAALVLVSG KALELGLQVIAKIRG+ADAAQAPE FTTAP+LAIPKA
Sbjct: 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKA 300
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ +AGLEASQ+DYYEINEAFSVVA+ANQKLLGLDPE+VN HGGAVSLGHP+GCSGARILV
Sbjct: 301 LKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILV 360
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405
TLLGVLR K GKYGV GICNGGGGASA+V+ELMQ
Sbjct: 361 TLLGVLRSKNGKYGVAGICNGGGGASAIVVELMQ 394
|
Length = 394 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 507 bits (1307), Expect = e-180
Identities = 207/387 (53%), Positives = 267/387 (68%), Gaps = 4/387 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G F G+L VSA LG+ I+ L+RA + P V +V GNVL A GQ P
Sbjct: 2 IVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNP 61
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV TT+N+VC SG++AV LAAQSI G D+VVAGG+ESMS AP L
Sbjct: 62 ARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLL 121
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+AR+G RLG +T+ DGML DGL D + MG+ AE A K+ I+R+EQD +A+RS +R
Sbjct: 122 PKARRGGRLGLNTL-DGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQR 180
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVTA 255
AAQ +G F EI PVE+ +G ++VD+DEG KL KL+P+FK+ G+VTA
Sbjct: 181 AAAAQEAGRFKDEIVPVEVPGRKGP--VVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTA 238
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANA 315
GNAS I+DGAAA++L+S KA ELGL+ +A+I G+A A P P AIPKA+ A
Sbjct: 239 GNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRA 298
Query: 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLG 375
GL ID EINEAF+ A+A K LGLDPE+VN +GGA++LGHPLG SGARI+VTLL
Sbjct: 299 GLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLH 358
Query: 376 VLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G+YG+ +C GGG +A+V+E
Sbjct: 359 ELKRRGGRYGLATMCIGGGQGAAMVIE 385
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 473 bits (1219), Expect = e-167
Identities = 201/392 (51%), Positives = 261/392 (66%), Gaps = 4/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV ARTP+G F G+L VSA +LG+I I+ AL+RA V P V EV G VL A
Sbjct: 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAAL AG+P V TINKVC SG+KAV LAAQ+I+ G DIVVAGG ESMS A
Sbjct: 62 GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L +R G ++G +VD M+ DGL D +N + MG+ AE A ++ ITR+EQD +A+
Sbjct: 122 PHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPSFKEG 250
S ++ AA +G F EI PV + +G P ++VD DE + D A L KLRP+F +
Sbjct: 182 SQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHP-RPDTTAESLAKLRPAFDKD 239
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAAA+V++S KA ELGL +A+I +A A P P AI K
Sbjct: 240 GTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRK 299
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ AG + +D EINEAF+ A+A +K LGLDPE+VN +GGA++LGHP+G SGARIL
Sbjct: 300 ALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARIL 359
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
VTLL ++ + K G+ +C GGG AL++E
Sbjct: 360 VTLLHEMKRRGAKKGLATLCIGGGQGVALIVE 391
|
Length = 393 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-150
Identities = 194/388 (50%), Positives = 251/388 (64%), Gaps = 4/388 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP+G F GSL VSA LG+ I+ L+R + P L+ +V FGNVL A Q
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
ARQAAL AG+P SV T+N+ C+SG++AV+LAAQ I+ G D+VVAGG+ESMS P +
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 137 -AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195
R G + G+ + D +LKDGL D N MG+ AE A K+ I+R+EQD YA+RS +
Sbjct: 121 PRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQ 180
Query: 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGGSVT 254
R A GLF EI PV S K ++V DEG+ KL KL+P+F G+VT
Sbjct: 181 RAAKAWEEGLFKDEIVPV--SVKGRKGPVVVSSDEGIRPNTTLEKLAKLKPAFDPNGTVT 238
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGN+S ++DGAAAL+L+S KA ELGL +A+I +A A PE P AIPKA+
Sbjct: 239 AGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAIPKALKK 298
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
AGL S ID +EINEAF+ +A K LGLD E+VN +GGA++LGHPLG SGARI+ TLL
Sbjct: 299 AGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLL 358
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G+YG+ IC GGG A++LE
Sbjct: 359 HELKRRGGRYGLATICIGGGQGIAVILE 386
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 397 bits (1021), Expect = e-137
Identities = 183/388 (47%), Positives = 245/388 (63%), Gaps = 4/388 (1%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV ARTP G F GSL V AT+LG IAI+ AL+RANV V+EV G VL GQ P
Sbjct: 6 IVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIP 65
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
+RQAA AGIP V T+NKVC+SG++AV LA Q I+ G ++VAGGMESMSNAP L
Sbjct: 66 SRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYIL 125
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
AR G R+G + ++D M+ DGL ++ MGV A + I+R+ QD +A RS +R
Sbjct: 126 PGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQR 185
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KLMKLRPSFKEGGSVT 254
++A G F EI PV + +G P I+V KDE K D KL KL+P F + G++T
Sbjct: 186 AVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRK-DTTIEKLAKLKPVFDKTGTIT 243
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314
AGNA ++DGAAALVL+S +A + G + +A I A + F P AI +
Sbjct: 244 AGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEK 303
Query: 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 374
G ID +EINEAF+ VA+A+ ++ G+DPE+VN +GGAV+LGHP+G SGARI+VTL+
Sbjct: 304 TGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLI 363
Query: 375 GVLRHKKGKYGVGGICNGGGGASALVLE 402
L+ + G G+ IC+GGG A+++E
Sbjct: 364 HELKRRGGGIGIAAICSGGGQGDAVLIE 391
|
Length = 393 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-135
Identities = 198/398 (49%), Positives = 263/398 (66%), Gaps = 5/398 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
++ + I ARTPM F G +S++A +LG+ AI A++RA +KP + EV G VL
Sbjct: 3 AVDQDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVL 62
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQAPARQAALGAG+P SV CTT+NK+C SGM+A M A + G D++VAGGMES
Sbjct: 63 PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMES 122
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG--MGVCAEICANKHTITRDEQ 186
M+NAP L +AR G R+GH ++D M DGL D Y D G MG AE CA ++ TR+ Q
Sbjct: 123 MTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAY-DKGRLMGTFAEECAGEYGFTREAQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D++AI S R A G FAWEIAPV ++ +G ++D+DE K + K+ L+P+
Sbjct: 182 DAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGD--TVIDRDEQPFKANPEKIPTLKPA 239
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
F + G+VTA N+S ISDGAAALV++ A LGL +A++ G + AQAP FTTAP
Sbjct: 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVG 299
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AI K G A+++D +EINEAF+VV +A K GL E+VN +GGA +LGHP+G SG
Sbjct: 300 AIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASG 359
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
ARILVTL+G LR + GK GV +C GGG A+A+ +EL+
Sbjct: 360 ARILVTLIGALRARGGKRGVASLCIGGGEATAMGIELI 397
|
Length = 397 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 339 bits (872), Expect = e-114
Identities = 174/390 (44%), Positives = 249/390 (63%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F GSL+++ A +LG+ I L++ + P V EV G VL+A
Sbjct: 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P+SV T+NKVC SG+KA+ LAAQ+I+ G ++++AGG E+MS A
Sbjct: 62 GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P L AR G R+GH +VD M+ DGLWD +ND+ MG+ AE K+ I+R+ QD++A
Sbjct: 122 PYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252
S ++ +AA +G F EI P+ + +G+P ++ A L KL+P+FK+ GS
Sbjct: 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGS 241
Query: 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312
VTAGNAS ++DGAAA++L+S KA LGL V+AKI +A+A P P A + +
Sbjct: 242 VTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCL 301
Query: 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVT 372
AG +++D E NEAF+ ++A K LG D +VN +GGA++LGHP+G SG R+LVT
Sbjct: 302 DKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVT 361
Query: 373 LLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LL + + K G+ +C GGG AL +E
Sbjct: 362 LLHEMIRRDAKKGLATLCIGGGQGVALAIE 391
|
Length = 393 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 323 bits (831), Expect = e-110
Identities = 150/261 (57%), Positives = 187/261 (71%), Gaps = 3/261 (1%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
DV IV ARTP+G F GSL +SA LG+IAI+ AL+RA VKP V EV GNVL A G
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
Q PARQAAL AGIP+SV TINKVC SG+KAV LAAQ+I+ G DIVVAGG+ESMSNAP
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 134 KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
L +R G+R+G +VD MLKDGL D +N MG+ AE A K+ I+R+EQD +A+RS
Sbjct: 121 YVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFALRS 180
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF-KEGG 251
++ AAQ +G F EI PV + +GKP ++VDKDEG+ L KL+P+F KE G
Sbjct: 181 QQKAAAAQKAGKFKDEIVPVTIKGRKGKP-LVVDKDEGIRPGTTLESLAKLKPAFDKENG 239
Query: 252 SVTAGNASIISDGAAALVLVS 272
+VTAGNAS ++DGAAA++L+S
Sbjct: 240 TVTAGNASGLNDGAAAVLLMS 260
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-105
Identities = 175/405 (43%), Positives = 234/405 (57%), Gaps = 31/405 (7%)
Query: 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR--ANVKPLLVQEVFFGNVLS 69
RDV IVG RTP G F GSL+ ++A LG+ I+ L+R A+V V +V G VL
Sbjct: 2 RDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQ 61
Query: 70 A-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
A GQ ARQAAL AG+P SV T+N+ C+SG+ AV LAAQ+I G D+V+AGG+E
Sbjct: 62 AGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEK 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS+AP R+G R+ D+ VD M +D L D + MG+ AE A ++ I+R++QD
Sbjct: 122 MSDAPMG----REGVRVL-DSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDE 176
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLR 244
A++S K A +G F EI P ++ + V D + D + L
Sbjct: 177 VAVKSHKNAAANPKAGFF-DEITPEDVLNSP------VVADPLR-RLDCSPTSDGAAALV 228
Query: 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTA 303
P+F+E GG+VTAGNAS I+DGAAAL+L+S KA ELGL +A IR +A A P
Sbjct: 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DG 287
Query: 304 PSLAIPKAIANAGLEA-SQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
P A+ A+ AGL A + E EAF+ VA+ K+LG P VN GGA++LGHP+
Sbjct: 288 PVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPI 345
Query: 363 GCSGARILVTLLGVLRHK----KGKYGVGGICNGGGG-ASALVLE 402
G +GARILV L LR + + G+ +C GGGG A VLE
Sbjct: 346 GATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLE 390
|
Length = 392 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 311 bits (799), Expect = e-103
Identities = 175/400 (43%), Positives = 240/400 (60%), Gaps = 20/400 (5%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RT +G F S S + A +LG AI+ + A + P LVQEV GNV+ A +
Sbjct: 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PA QAA AG+P V T+N VC+SGM AV AA+ I LG D+V+AGGME+MSNA
Sbjct: 62 GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNA 121
Query: 133 PKYL-AEARKGSR-LGHDT--IVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
P L ++ R G + L H I D ML DGL D + MGV AE A K+ ITR+ D
Sbjct: 122 PFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADE 181
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248
Y+++S++R I A SG F EI P +D+DEG+ K L KL P+F
Sbjct: 182 YSVQSYERAIRATESGEFRNEIVPFND----------LDRDEGIRKTTMEDLAKLPPAFD 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G +TAGN++ +SDG +ALV+ S E GL+ IA+I G+ A+ P F AP A
Sbjct: 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPAT 291
Query: 309 PKAIANAGLEASQIDYYEI---NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
K + IDYY++ NEAFS+ +I + L +D E+ N +GGAV++GHP+G S
Sbjct: 292 RKLLEKQN---KSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNS 348
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405
G+RI+VTL+ L+ + K G+ +C+GGGGA L LE+++
Sbjct: 349 GSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTLEMVE 388
|
Length = 388 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 309 bits (795), Expect = e-103
Identities = 163/394 (41%), Positives = 229/394 (58%), Gaps = 6/394 (1%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN 71
R+V +V RT +G F GSL V+ T LG+ + AL RA V P V V FG+V+
Sbjct: 2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTE 61
Query: 72 LGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
+R AA+ AG+P +N++C SG++A++ AAQ+I LG D+ + GG ESMS
Sbjct: 62 PRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
AP L AR G+R+G +VD M+ L D + MGV AE A K+ I+R+ QD+ A
Sbjct: 122 RAPYLLPAARWGARMGDAKLVDMMVG-ALHDPFGTIHMGVTAENVAAKYGISREAQDALA 180
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSF-K 248
+ S +R AA +G F +I PVE+ + +G+ ++ D DE + L KL+P F K
Sbjct: 181 LESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFKK 238
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
E G+VTAGNAS I+DGAAA+VL A GL+ +A++ G+A A PE+ P A
Sbjct: 239 ENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPAT 298
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR 368
KA+ AGL + +D E NEAF+ A A + LGLDP +VN +G +SLGHP+G +GA
Sbjct: 299 QKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAI 358
Query: 369 ILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
I V L L+ G+Y + +C GGG A + E
Sbjct: 359 ITVKALYELQRIGGRYALVTMCIGGGQGIAAIFE 392
|
Length = 394 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 277 bits (711), Expect = 5e-90
Identities = 158/405 (39%), Positives = 221/405 (54%), Gaps = 20/405 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
RD I RTP+G F G+ V A +L + I ++R + P + +V FG N
Sbjct: 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQG-YPN- 59
Query: 73 GQAPA--RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G+APA R AAL AG+P +V +++ C SG++AV+ AA +Q G D+V+AGG ESMS
Sbjct: 60 GEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS 119
Query: 131 NAPKYLAEARKGSRLG----HDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
N Y + R G R G HD + G G GM AE ++ I+R+EQ
Sbjct: 120 NVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQ 179
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG------LEKFDAAKL 240
D+ A+RS +R +AAQ +G F EI PV + +G P +VD+DE LE AKL
Sbjct: 180 DALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESL--AKL 236
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
+ +VTAGNAS +D AAA ++ + KA ELGL+ +A++ +A A P
Sbjct: 237 RPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRM 296
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVS 357
P A KA+A AGL ID E+NEAF+ +A K G D E++N +G +S
Sbjct: 297 GIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGIS 356
Query: 358 LGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
LGHP+G +G RIL TLL L+ ++ +YG+ +C GGG A V E
Sbjct: 357 LGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQGLAAVFE 401
|
Length = 404 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 271 bits (696), Expect = 8e-88
Identities = 165/413 (39%), Positives = 231/413 (55%), Gaps = 38/413 (9%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
+ I RTP+G + G+LSSV A LG++ ++ + R V V +V +G AN
Sbjct: 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYG---CAN 58
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR +AL AG+P SV TTIN++C SGM AV AA++I+ G ++++AGG
Sbjct: 59 --QAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGG 116
Query: 126 MESMSNAPKYLAEARKG-SRLG--HDT-----IVDGMLKDGLWDVYNDFGMGVCAEICAN 177
+ESMS AP + +A SR DT V+ ++K Y M AE A
Sbjct: 117 VESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKA----QYGVDSMPETAENVAE 172
Query: 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE------G 231
+ I+R +QD++A+RS +R AAQ +G A EI PV + +G P ++VD+DE
Sbjct: 173 DYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETT 231
Query: 232 LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA 291
LE L KL+P F+ G+VTAGNAS ++DGAAAL+L S A + GL A+I G A
Sbjct: 232 LEA-----LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMA 286
Query: 292 DAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQV 349
A P P+ A K +A GL Q D E+NEAF+ +A + LGL D +V
Sbjct: 287 TAGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARV 346
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA++LGHPLG SGAR+++T L L G+Y + +C G G AL +E
Sbjct: 347 NPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIALAIE 399
|
Length = 401 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 268 bits (686), Expect = 1e-86
Identities = 160/391 (40%), Positives = 234/391 (59%), Gaps = 4/391 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ V I RT G F+GSLS+ A L + I+ L+ + + P LV EV G V++
Sbjct: 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQ + AGIP V TINKVC SG+K+V LAA SI G N+IV+AGG E+MS
Sbjct: 63 GQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
+ + R G++ G +VD M DGL DV++ MG+ AE + + I+R EQD +A+
Sbjct: 123 -MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENISKQFNISRQEQDEFALS 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM-KLRPSFKEGG 251
S K+ AQ +G+F EI P+E++ + + D DE + + +++ KLRP+F + G
Sbjct: 182 SHKKAAKAQLAGIFKDEILPIEVTIKKTTS--LFDHDETVRPDTSLEILSKLRPAFDKNG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
VTAGNAS I+DGAA L++VS + L +A+I +A A P TAP A KA
Sbjct: 240 VVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKA 299
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
++ AG + ++ E+NEAF+ +I + + D E+VN +GGA+++GHP+G SG R+L+
Sbjct: 300 LSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLI 359
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TL+ LR K K G+ +C GGG A+ +E
Sbjct: 360 TLIHGLRRAKAKKGLVTLCIGGGMGMAMCVE 390
|
Length = 392 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 2e-86
Identities = 159/402 (39%), Positives = 231/402 (57%), Gaps = 22/402 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL-SA 70
R+ IV ARTP+G GSL +V LG++ ++ LKRA + ++ G + A
Sbjct: 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEA 61
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AG+P +V TIN+ CSSG++++ A+ I LG ++ V+AGG ESMS
Sbjct: 62 EQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMS 121
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +GH + L + + Y GMG AE A K+ I+R++QD++A
Sbjct: 122 LVPM----------MGHVVRPNPRLVEAAPEYY--MGMGHTAEQVAVKYGISREDQDAFA 169
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR----GKPF---IIVDKDEGLE-KFDAAKLMK 242
+RS +R A G FA EI PV+++ K I +DEG+ L K
Sbjct: 170 VRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGK 229
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
LRP+F GSVTAGN+S +SDGAAA++L+ KA GL+ +AK R FA A PE
Sbjct: 230 LRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGI 289
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPL 362
P AIPKA+ AGLE S I +E+NEAF+ +I + LGLD E+VN +GGA++LGHPL
Sbjct: 290 GPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPL 349
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GC+GA++ ++L+ ++ + ++G+ +C GGG +A V EL+
Sbjct: 350 GCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFELL 391
|
Length = 391 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 2e-81
Identities = 160/404 (39%), Positives = 230/404 (56%), Gaps = 20/404 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN 71
R+ I RTP+G + GSLSSV A L ++ I+ L R + + +V +G AN
Sbjct: 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYG---CAN 57
Query: 72 LGQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
QA AR AAL AG+P SV TT+N++C SG+ A+ +AA++I+ G D+++AGG
Sbjct: 58 --QAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGG 115
Query: 126 MESMSNAPKYLAEAR----KGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181
+ESMS AP + +A + +++ TI + + +Y M AE A + I
Sbjct: 116 VESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPETAENVAEEFGI 175
Query: 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAK-L 240
+R++QD++A+RS +R AAQ SG FA EI PV + +G+P +VD+DE + L
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGL 234
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL+P + G+VTAGNAS ++DGAAAL+L S GL A+I A A P
Sbjct: 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIM 294
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSL 358
P A K +A AGL Q D E+NEAF+ A+A + LGL D +VN +GGA++L
Sbjct: 295 GIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIAL 354
Query: 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
GHPLG SGAR+++T L L G+Y + +C G G AL +E
Sbjct: 355 GHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQGIALAIE 398
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 255 bits (652), Expect = 2e-81
Identities = 137/402 (34%), Positives = 205/402 (50%), Gaps = 23/402 (5%)
Query: 13 RDVCIVGVARTPMGGFLGS------LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV +V ART F +++ +L ++ I +++ +KP + ++ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
L R A +P ++ +++ C+S + V + A I G+ DIV+AGG
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDG---LWDVYNDFGMGVCAEICANKHTIT 182
+E M+ P H +L D +D+ + MG+ AE A + I
Sbjct: 122 VEHMTRTPMGDNP--------HIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIK 173
Query: 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA--KL 240
R+E D +++RS + A G F EI P+E+ K +VD D+ + D + KL
Sbjct: 174 REEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKK--KVVDVDQSVRP-DTSLEKL 230
Query: 241 MKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300
KL P+FK G +TAGN+S ++ GA+ ++L+S + GL+ +AKIR F A P
Sbjct: 231 AKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIM 290
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360
P A KA+ AGL ID +EINEAF+VV + K LGLDPE VN GGA+++GH
Sbjct: 291 GKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGH 350
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
PLG +GARI+ TL L+ K YGV +C GGG A+VLE
Sbjct: 351 PLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQGGAVVLE 392
|
Length = 394 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 1e-79
Identities = 150/410 (36%), Positives = 220/410 (53%), Gaps = 30/410 (7%)
Query: 12 ARDVCIVGVARTPM-----GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
DV IV RTP+ GGF + L + ++ +++ + P V ++ G
Sbjct: 45 GDDVVIVAAYRTPICKAKRGGFKDTY----PDDLLAPVLKAVVEKTGLNPSEVGDIVVGT 100
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G
Sbjct: 101 VLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 160
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+ P E R+ + +D L MG+ +E A + +TR+E
Sbjct: 161 VESMTTNPMAW-EGGVNPRVESFS----QAQDCL------LPMGITSENVAERFGVTREE 209
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPV-----EMSSGRGKPFIIVDKDEGL-EKFDAAK 239
QD A+ S ++ AA SG F EI PV + +G KP I++ D+G+ A
Sbjct: 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP-IVISVDDGIRPNTTLAD 268
Query: 240 LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
L KL+P FK+ G+ TAGN+S +SDGA A++L+ A++ GL ++ R FA P
Sbjct: 269 LAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAV 328
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLG 359
P++AIP A+ AGLE ID +EINEAF+ + K LGLDPE+VN +GGA++LG
Sbjct: 329 MGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALG 388
Query: 360 HPLGCSGARILVTLLGVL--RHKKGKYGVGGICNGGGGASALVLELMQAV 407
HPLG +GAR + TLL + R K ++GV +C G G +A V E +V
Sbjct: 389 HPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSV 438
|
Length = 452 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 5e-78
Identities = 148/404 (36%), Positives = 223/404 (55%), Gaps = 24/404 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVL-SA 70
D IV RTP+G G + L + + A+ + + P L+++ G + A
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AL AG+PNSV T+N+ C+SG++AV +AA I++G D+++A G+ESMS
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
P +G+ + + +V +GMG+ AE A + ++R++QD++A
Sbjct: 127 MVPM----------MGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFA 176
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGR-----GKPFI---IVDKDEGLEKFDAAK-LM 241
+ S ++ IAAQ +G F EI P E++ G+ + VD DEG + + L
Sbjct: 177 LESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLA 236
Query: 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKAL-ELGLQVIAKIRGFADAAQAPEWF 300
KL+P F GSVTAGN+S SDGA A++LVS KAL + L +A+ FA A PE
Sbjct: 237 KLKPVFANKGSVTAGNSSQTSDGAGAVILVSE-KALKQFNLTPLARFVSFAVAGVPPEIM 295
Query: 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360
P AIP A+ AGL+ +D+ E+NEAF+ ++A + LGLDP +VN GGA++LGH
Sbjct: 296 GIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGH 355
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
PLG +GA T++ LR KYG+ +C G G +A + E +
Sbjct: 356 PLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMGAAGIFERL 399
|
Length = 399 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 1e-76
Identities = 154/413 (37%), Positives = 216/413 (52%), Gaps = 52/413 (12%)
Query: 13 RDVCIVGVARTPMG---GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVL 68
DV IV RTPMG G G+ +V A L + + L R + P + ++ +G V
Sbjct: 2 EDVVIVDAIRTPMGRSKG--GAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCV- 58
Query: 69 SANLGQA--PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
L Q AR AAL AGIP+SV T+N++C S M+A+ AA++I G D+ + GG+
Sbjct: 59 QQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGV 118
Query: 127 ESMSNAP------------KYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174
E M + P K +A+A GM MG+ AE+
Sbjct: 119 EHMGHVPMNHGVDFHPGLSKNVAKA------------AGM-------------MGLTAEM 153
Query: 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-E 233
H I+R++QD++A RS +R AA G F EI P E G + D DE +
Sbjct: 154 LGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGV-LKLFDYDEVIRP 212
Query: 234 KFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFAD 292
+ L LRP+F G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A
Sbjct: 213 ETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAV 272
Query: 293 AAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQV 349
A P P A KA+ AGL S ID +E+NEAF+ ++ K LGL E+V
Sbjct: 273 AGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKV 332
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA++LGHPLGCSGARI TLL ++ K ++G+ +C G G A V E
Sbjct: 333 NLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATVFE 385
|
Length = 387 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 241 bits (618), Expect = 3e-76
Identities = 146/406 (35%), Positives = 226/406 (55%), Gaps = 27/406 (6%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL 72
+ I RTP+G + G+LSSV A LG++ ++ ++R +V + +V +G AN
Sbjct: 3 EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYG---CAN- 58
Query: 73 GQAP------ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
QA AR + L AG+P+ V +TIN++C SGM AV +AA++I+ G +++AGG+
Sbjct: 59 -QAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGV 117
Query: 127 ESMSNAPKYLAEAR----KGSRLGHDTI----VDGMLKDGLWDVYNDFGMGVCAEICANK 178
ESMS AP + +A + + + TI V+ ++K +Y M AE A
Sbjct: 118 ESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ----LYGVDSMPETAENVATD 173
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ++R +QD++A+RS ++ AQ G A EI PV + +G P ++V +DE +
Sbjct: 174 YNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLE 232
Query: 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
L KL+ + G+VTAGNAS ++DGA AL+L S A GL+ A++ G A A P
Sbjct: 233 ALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPR 292
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAV 356
P+ A K +A G+ Q D E+NEAF+ +A + LGL D +VN +GGA+
Sbjct: 293 VMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAI 352
Query: 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
+LGHPLG SGAR++ T L L G++ + +C G G A+ +E
Sbjct: 353 ALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIAIE 398
|
Length = 400 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 231 bits (590), Expect = 5e-72
Identities = 145/402 (36%), Positives = 213/402 (52%), Gaps = 35/402 (8%)
Query: 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-----NLGQAP 76
R+P G G+L+SV L + I L+++ +++V G A N+
Sbjct: 11 RSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNV---- 66
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR A L AG+P +V T+N++C+SG+ AV+ AA++I G D+ +AGG+ESMS AP +
Sbjct: 67 ARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVM 126
Query: 137 AEARK-------------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183
+A G+R + IV Y + M + A + I+R
Sbjct: 127 GKAESAFSRDAKVFDTTIGARFPNPKIVAQ---------YGNDSMPETGDNVAAEFGISR 177
Query: 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMK 242
++ D +A +S + AA+ G FA EI P+E+ GR P +V +DE L K
Sbjct: 178 EDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTK 237
Query: 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
L+P F EGG VTAGNAS I+DGAAAL++ S + GL+ +A+I A A P
Sbjct: 238 LKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGI 296
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGH 360
P AI KA+A AGL +D EINEAF+ + K LG+ D +VN +GGA+++GH
Sbjct: 297 GPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGH 356
Query: 361 PLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
PLG SGAR+ +T L+ + +Y V +C G G A+V+E
Sbjct: 357 PLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVIE 398
|
Length = 401 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 4e-71
Identities = 139/398 (34%), Positives = 216/398 (54%), Gaps = 27/398 (6%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV ART G G L+ L + ++ + R+ P L+++V G V
Sbjct: 6 IVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
AR A L + +P SV T+I++ C S +A+ AAQ++ G DIV+A G+ESM+ P
Sbjct: 66 VARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMG 125
Query: 136 LAE---ARKGSRLGHDTIVDGMLKDGLWDVYND--FGMGVCAEICANKHTITRDEQDSYA 190
A+ G LGH G+ + Y F AE+ A K+ +++D+ D +A
Sbjct: 126 SPSTLPAKNG--LGH------YKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFA 177
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKLRPS 246
++S +R IAA +G F EI P+E++ G + DEG+ +FDA +KL
Sbjct: 178 LQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGI-RFDATLEGIAGVKL--- 232
Query: 247 FKEGGSVTAGNASIISDGAAALVLVS--GVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
EGG +TA AS I DGA+ +++V+ G+KAL G++ +A+I P AP
Sbjct: 233 IAEGGRLTAATASQICDGASGVMVVNERGLKAL--GVKPLARIHHMTVIGGDPVIMLEAP 290
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
A +A+ AG++ ID YE+NEAF+ V +A K G DPE++N +GGA++LGHPLG
Sbjct: 291 LPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGA 350
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
SG +++ TL+ L+ + +YG+ +C GGG A+ ++E
Sbjct: 351 SGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIVE 388
|
Length = 390 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 2e-70
Identities = 143/391 (36%), Positives = 204/391 (52%), Gaps = 21/391 (5%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L+ V LG+ ++ + R + P V +V FG V QA
Sbjct: 6 IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCV-DTIGPQAG 64
Query: 77 --ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
AR + L AG+P V T+++ C S +A+ AAQ++ G D+VVAGG+++MS P
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIP- 123
Query: 135 YLAEARK-GSRLGHDTIVDGMLKDGLWDVYNDFGMG--VCAEICANKHTITRDEQDSYAI 191
++ A G +LG + G Y D + AE+ A K I+R+E + +A+
Sbjct: 124 -ISSAMTAGEQLGFTSPFAE--SKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFAL 180
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGG 251
S +R AA +G F EI PV V DEG + K+ L+P EGG
Sbjct: 181 ESHRRAFAAIRAGRFDNEIVPVGG----------VTVDEGPRETSLEKMAGLKP-LVEGG 229
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+TA AS ISDGA+A++L S GL A+I + P + TAP A A
Sbjct: 230 RLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYA 289
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ GL ID EINEAF+ V +A K G DP +VN +GGA++LGHPLG +GA+++
Sbjct: 290 LEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMT 349
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TLL L G+YG+ +C GGG A+ ++E
Sbjct: 350 TLLHELERTGGRYGLQTMCEGGGTANVTIIE 380
|
Length = 382 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 2e-69
Identities = 139/406 (34%), Positives = 218/406 (53%), Gaps = 31/406 (7%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN- 71
+ IV ARTP+ + G+ + LG ++ A++RA + P V++V G AN
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMG---CANP 59
Query: 72 ---LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G ARQ AL AG+P +V T+N+ CSSG++ + LAAQ + G D+ VAGG+ES
Sbjct: 60 EGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES 119
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
+S + + +G L + ++Y + M AE A ++ I+++ QD
Sbjct: 120 ISCVQN---------EMNRHMLREGWLVEHKPEIY--WSMLQTAENVAKRYGISKERQDE 168
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPF--------IIVDKDEGLEKFDAAK- 239
Y ++S +R AAQ +G F EI P+ +++G + V DEG+ D
Sbjct: 169 YGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRP-DTTLE 227
Query: 240 -LMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
+ K+R + GG +TAGNAS SDGA+A V+++ A GLQ + RGFA A P+
Sbjct: 228 GVSKIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPD 286
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358
P A+PK + AGL+ ID +E+NEAF+V + + LG+ +++N +GGA+++
Sbjct: 287 EMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAV 346
Query: 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GHP G SGAR+ L + + KY V +C GGG +A + E++
Sbjct: 347 GHPYGVSGARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLFEVL 392
|
Length = 392 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-69
Identities = 144/415 (34%), Positives = 210/415 (50%), Gaps = 46/415 (11%)
Query: 17 IVGVARTPMG-GFLGSLSSVSATKLGSIAIECAL-KRANVKPLLVQEVFFGNVLSA-NLG 73
IV AR+P+G F GSL + L + + AL K + P + ++ G L G
Sbjct: 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQG 65
Query: 74 QAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP 133
AR A+ G + TT+N+ CSS ++ +A +I+ G D+ ++ G+E++S
Sbjct: 66 FNMARVVAVLLGYDF-LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFA 124
Query: 134 K------------YLAEARK--------GSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173
K AEA+ G+ HD DG+L D VY MG AE
Sbjct: 125 KGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPD----VY--IAMGQTAE 178
Query: 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG-- 231
A I+R+EQD + +RS R A +G F EI PV + G +V D+G
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233
Query: 232 ----LEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKI 287
EK L+P F+ G+VTAGNA ++DGAAA+V++S KA ELGL +A+I
Sbjct: 234 AGTTYEKVSQ-----LKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARI 288
Query: 288 RGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE 347
+ +PE P A +A+A AG+ ID EINEAF+ + + + LG+D +
Sbjct: 289 VSTGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDED 348
Query: 348 QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
++N GGA++LGHP G +GARI TLL L+ +G+ +C GGG A+VLE
Sbjct: 349 KLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGMAMVLE 403
|
Length = 406 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 2e-66
Identities = 139/413 (33%), Positives = 202/413 (48%), Gaps = 55/413 (13%)
Query: 22 RTPMGGFL--GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS-ANLGQAPAR 78
RTP G GSL V +L + +E R + V +V G V + G AR
Sbjct: 11 RTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIAR 70
Query: 79 QAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE 138
A L AG+P +V IN+ C+SG++AV LAA ++ G +D+V+AGG+ESMS P
Sbjct: 71 TAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPM---- 126
Query: 139 ARKGSRLGHDTIVDGMLKDGLWDVYNDFGM-------GVCAEICANKHTITRDEQDSYAI 191
GS DG G W + G+ A++ A K+ +R++ D+YA+
Sbjct: 127 ---GS--------DG----GAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVDAYAV 171
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250
S +R AA G FA + PV+ +G I+D DE + L KL+PSF
Sbjct: 172 ESQQRAAAAWAEGYFAKSVVPVKDQNG----LTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 251 GSV---------------------TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRG 289
G + AGN+S I DGAAA+++ S LGL+ A+I
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 290 FADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQV 349
A P T P A KA+A AGL ID +E+NEAF+ V + + L + ++V
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKV 347
Query: 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
N +GGA+++GHPLG +GA IL T+L L + + + +C GGG A ++E
Sbjct: 348 NVNGGAIAMGHPLGATGAMILGTVLDELERRGKRTALITLCVGGGMGIATIIE 400
|
Length = 402 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 6e-66
Identities = 148/397 (37%), Positives = 208/397 (52%), Gaps = 22/397 (5%)
Query: 14 DVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNV-LSA 70
DV IV RTPMG G+ + A L + + L R V P V+++++G V +
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 71 NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
G AR AAL A IP++ T+N++C S M+A+ AA++I G D+ + GG+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 131 NAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190
+ P H GM MG+ AE+ H I+R++QD++A
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM-------------MGLTAEMLGKMHGISREQQDAFA 167
Query: 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLRPSFK- 248
RS R AA G F EI P + G D DE + + L LRP+F
Sbjct: 168 ARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQF-DYDEVIRPETTVESLAALRPAFDP 226
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
+ G+VTAG +S +SDGA+A++++S +A ELGL+ A+IR A A P P A
Sbjct: 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPAT 286
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVSLGHPLGCS 365
KA+ AGL S ID +E+NEAF+ A+ K LGL E+VN +GGA++LGHPLGCS
Sbjct: 287 QKALKRAGLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCS 346
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
GARI TLL ++ K +G+ +C G G A V E
Sbjct: 347 GARISTTLLNLMEQKDATFGLATMCIGLGQGIATVFE 383
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 8e-64
Identities = 154/436 (35%), Positives = 213/436 (48%), Gaps = 52/436 (11%)
Query: 11 KARDVCIVGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV 67
AR V IV ARTP FL G SA+ L A L R P + EV G
Sbjct: 1 MARPVYIVDGARTP---FLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA 57
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
+ + AR AL G V T+ + C+SGM+A+ AA +I LG D+V+AGG+E
Sbjct: 58 MPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVE 117
Query: 128 SMSNAP--------KYLAE------------ARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167
+MS+AP ++LA A R + V G+L+ GL D
Sbjct: 118 AMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLR-GLTDPVVGLN 176
Query: 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVD 227
MG AE+ A++ ITR++ D+YA RS +R AAQ G E+ P + GK + D
Sbjct: 177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP--LFDRDGKFY---D 230
Query: 228 KDEGL-EKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIA 285
D+G+ KL KL+P F + G VTAGN+S I+DGA L+L S + GL +
Sbjct: 231 HDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLG 290
Query: 286 KIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQ------ 339
+I AA P P A + GL +D +EINEAF+ +A
Sbjct: 291 RIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADE 350
Query: 340 ----KLLGL-------DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388
+ LGL D E++N GGA++LGHP+G SGARI++ LL L+ + K G+
Sbjct: 351 EYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTKRGIAA 410
Query: 389 ICNGGGGASALVLELM 404
IC GGG A++LE +
Sbjct: 411 ICIGGGQGGAMLLERV 426
|
Length = 426 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 1e-60
Identities = 134/394 (34%), Positives = 196/394 (49%), Gaps = 22/394 (5%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA-NLGQA 75
IV RTP+G G LS + A +L L RA + P V++V G V A
Sbjct: 6 IVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNN 65
Query: 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135
R A L AG+P V TTI+ C S +A L A I G D+ +A G+E+MS P
Sbjct: 66 ITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPL- 124
Query: 136 LAEARKGSRLGHDTIVDGMLKDGLW--DVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193
G+ G G+ + W D+ N F AE A + ITR++ D++ +RS
Sbjct: 125 ------GANAGPGR---GLPRPDSWDIDMPNQFE---AAERIAKRRGITREDVDAFGLRS 172
Query: 194 FKRGIAAQNSGLFAWEIAPVEMSSG--RGKP---FIIVDKDEGLEKFDAAKLMKLRPSFK 248
+R A G F EI+PV+ G+P +V +D+GL L L+P
Sbjct: 173 QRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVL- 231
Query: 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAI 308
EGG TAG +S ISDGAAA++ + +A LGL+ A+I A P + P A
Sbjct: 232 EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQAT 291
Query: 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR 368
K + AG++ ID EINEAF+ V ++ ++ D ++VN +GGA++LGHP+G +GAR
Sbjct: 292 AKVLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGAR 351
Query: 369 ILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
++ T L L + +C GG ++ ++E
Sbjct: 352 LITTALHELERTDKSTALITMCAGGALSTGTIIE 385
|
Length = 387 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 3e-56
Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 32/389 (8%)
Query: 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAP 76
IV RTP+G G L +L + + K ++ + +V GNV+ G
Sbjct: 5 IVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GMERE-IDDVILGNVVGP--GGNV 59
Query: 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136
AR +AL AG+ + TI++ C +G++A+ A IQ G +AGG+ES S +P
Sbjct: 60 ARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP--- 116
Query: 137 AEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196
+ +R +TI D MGV AE A ++ ITR+ QD YA S+KR
Sbjct: 117 --FQNRARFSPETI-------------GDPDMGVAAEYVAERYNITREMQDEYACLSYKR 161
Query: 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256
+ A G EI ++D+ E + + +P+F G+VTAG
Sbjct: 162 TLQALEKGYIHEEILSFNG---------LLDESIKKEMNYERIIKRTKPAFLHNGTVTAG 212
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAG 316
N+ ++DGA A++++ +A +LG + + + A P T P A+ K +
Sbjct: 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMN 272
Query: 317 LEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376
++ IDY+EINEAF+ +A K L + E++N +GGA++LGHP G SGA ++ L
Sbjct: 273 MKVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332
Query: 377 LRHKKGKYGVGGICNGGGGASALVLELMQ 405
+ + KYG+ + GGG AL+ E ++
Sbjct: 333 AKREDMKYGIATLGIGGGIGLALLFEKVE 361
|
Length = 361 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 189 bits (481), Expect = 1e-55
Identities = 125/432 (28%), Positives = 206/432 (47%), Gaps = 48/432 (11%)
Query: 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ + IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 3 QGDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQ- 61
Query: 71 NLGQAP--ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+ +AP AR+ LG G+ ++++ C++ +AV A+SI G DI +AGG +S
Sbjct: 62 -MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADS 120
Query: 129 MSNAP----KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCA 172
S P K LA A K LG + + L+D + + MG A
Sbjct: 121 SSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTA 180
Query: 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI---IVDKD 229
E A + I+R+EQD+ A RS + A G E+ + + +P + D
Sbjct: 181 EQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK-QPLEEDNNIRGD 239
Query: 230 EGLEKFDAAKLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIR 288
LE + KLRP+F ++ G+VTA N++ ++DGAAA++L+S +A LGL + +R
Sbjct: 240 STLEDYA-----KLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLR 294
Query: 289 GFADAAQAPEW-FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLG---- 343
+A AA P+ A P A+ AGL + + +++EAF+ +AN ++
Sbjct: 295 SYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERF 354
Query: 344 -------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390
+D + N GG+++ GHP +GAR++ L LR + G G+ C
Sbjct: 355 AREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGLGLTTAC 414
Query: 391 NGGGGASALVLE 402
GG +A+VLE
Sbjct: 415 AAGGLGAAMVLE 426
|
Length = 428 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 176 bits (446), Expect = 5e-51
Identities = 127/425 (29%), Positives = 189/425 (44%), Gaps = 73/425 (17%)
Query: 18 VGVARTPMGGFLGSLSSVS---ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
G A T G F G + + A + G+ AI AL+ A V V+E G VL A GQ
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A+QAA+ AG +N +C SG++A+ LA Q I G + ++AGG E M + +
Sbjct: 61 NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAE 120
Query: 135 YLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194
A + + + N +GM R D++A+
Sbjct: 121 NNA-----------------KEKHIDVLINKYGM--------------RACPDAFALAGQ 149
Query: 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKL---MKLRPSFKEGG 251
AA+ G F E A + +G I D DE ++ D A L KLRP+F +
Sbjct: 150 AGAEAAEKDGRFKDEFAKFGVKGRKGD--IHSDADEYIQFGDEASLDEIAKLRPAFDKED 207
Query: 252 SVTAGNASIISDGAAALVLVS-------GVKALELGLQVIAKIRGFADAAQAPEWFT--- 301
+TAGNA ++DGAAA +L+S G+++ +Q + I A + +
Sbjct: 208 FLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVG 267
Query: 302 -TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ------------ 348
P A KA+ AGL +D E ++AF+ A A + LGL PE
Sbjct: 268 GDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNT 327
Query: 349 ------VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG-----ICNGGGGAS 397
+N +GGA+++GHP+G SGA I L L+ + GK G +C GGGG +
Sbjct: 328 YGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGA 387
Query: 398 ALVLE 402
A+ +E
Sbjct: 388 AMCIE 392
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 2e-47
Identities = 128/422 (30%), Positives = 198/422 (46%), Gaps = 42/422 (9%)
Query: 14 DVCIVGVARTPMG-GFLG--SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA 70
+ I+ RTP G G +G +L+ + L + ++ +R + V ++ + S+
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWST--SS 60
Query: 71 NLGQAPA---RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
G+ R AAL AG T+++ C G+ +V LAA I G+ D+V+AGG E
Sbjct: 61 QRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTE 120
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
MS A A + G + G L ++ GVC + A ITR+ D
Sbjct: 121 MMSYTA---AMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALD 177
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDE-GLEKFDAAKLMKLRPS 246
+ + S +R A G F + PV G + +D +E + A L L+P+
Sbjct: 178 ALGLESQRRAARAIKEGRFDKSLVPVYRDDGS----VALDHEEFPRPQTTAEGLAALKPA 233
Query: 247 FK--------EGGSV------------------TAGNASIISDGAAALVLVSGVKALELG 280
F + G+ AGN+S + DGAAAL+L S A + G
Sbjct: 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHG 293
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
L+ A+I A+ P AP A K +A AGL ID +EINEAF+VVA +
Sbjct: 294 LKPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIR 353
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
L LD ++VN +GGA++LGHP+G +G+ ++ T+L L + K G+ +C GG A A++
Sbjct: 354 DLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGLKRGLVTMCAAGGMAPAII 413
Query: 401 LE 402
+E
Sbjct: 414 IE 415
|
Length = 417 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 3e-47
Identities = 63/122 (51%), Positives = 85/122 (69%)
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
L+ +A+IR +A P P+ AIPKA+ AGL + ID +EINEAF+ A+A K
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
LG+DPE+VN +GGA++LGHPLG SGARILVTLL L+ + GKYG+ +C GGG A++
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGGKYGLATLCIGGGQGVAMI 120
Query: 401 LE 402
+E
Sbjct: 121 IE 122
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 5e-46
Identities = 123/423 (29%), Positives = 197/423 (46%), Gaps = 38/423 (8%)
Query: 15 VCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQ 74
+ IV RTP + + A LG + + L R+ + P L++++ FG V+
Sbjct: 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAP 68
Query: 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAP- 133
AR+ LG G+ ++ + C++ ++ + A+SI G DI +AGG +S S P
Sbjct: 69 NIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPI 128
Query: 134 ---KYLAEA----RKGSRLGHD-TIVDGM-LKD------GLWDVYNDFGMGVCAEICANK 178
K LA + K LG + + LKD + + MG AE A
Sbjct: 129 GVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKT 188
Query: 179 HTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA 238
+ ITR EQD+ A RS A G A E+ K +I D + A
Sbjct: 189 YGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPP--YKQWIAEDNNI-RHNSTLA 245
Query: 239 KLMKLRPSF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA 296
KLRP+F ++ GSVTA N++ ++DGAAA++L+ +A ELG++ + IR +A A
Sbjct: 246 GYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDV 305
Query: 297 PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLG------------- 343
+ PS A P A+ AGL S + +++EAF+ +AN ++
Sbjct: 306 WQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSK 365
Query: 344 ----LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399
+D + N GG+++ GHP +GAR++ L L+ + G G+ C GG +A+
Sbjct: 366 AMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGGLGLNTACAAGGLGAAM 425
Query: 400 VLE 402
+LE
Sbjct: 426 ILE 428
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 1e-36
Identities = 125/443 (28%), Positives = 194/443 (43%), Gaps = 74/443 (16%)
Query: 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA- 70
R V I+G R P G+ + S + + A++ + R ++ + EV G VL
Sbjct: 6 VRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHS 65
Query: 71 ---NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
NL R+ LG+ + + + C +G++A +L A I LG D +AGG++
Sbjct: 66 RDFNL----TRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD 121
Query: 128 SMSNAP--------KYLAEARKG---------------SRLGHDTIVDGMLKDGLWDVYN 164
+ S+AP K L E + L + +G + GL
Sbjct: 122 TTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGL----- 176
Query: 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224
MG A I A + I+R+ QD A S + AA + G F I P F+
Sbjct: 177 --SMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITP----------FL 224
Query: 225 IVDKDEGLEK-FDAAKLMKLRPSF--KEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281
+ +D L KL KL+P F ++TAGN++ ++DGA+ ++L S A E GL
Sbjct: 225 GLTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGL 284
Query: 282 QVIAKIRGFADAA-----QAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAI 336
V+A + A+ A E AP+ A+P+ +A GL D+YEI+EAF+ +
Sbjct: 285 PVLAYLV-DAETAAVDFVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVL 343
Query: 337 ANQKL----------LGL-------DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379
A K LGL D ++N +G +++ GHP +G RI+ TL +L
Sbjct: 344 ATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE 403
Query: 380 KKGKYGVGGICNGGGGASALVLE 402
K G+ IC GG +LE
Sbjct: 404 KGSGRGLISICAAGGQGVTAILE 426
|
Length = 427 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 4e-16
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA----DAAQAPEWFTTAPSLAIPK 310
+ DGAAA V+ S AL G A+I A A+ P + A K
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAH---GGAVSLGHPLGCSGA 367
A+ AGL S IDY E + + + A + LGLDP+ V + + GHPLG +G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 368 RILVTLLGVLRHKKGKY-------GVGGICNGGGGASALVL 401
IL LL +L H+ + GG +A+VL
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 5e-13
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 31/172 (18%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAA-----QAPEWFTTAPS--LAIPKA 311
+SDGAAA+VL S +A EL + + I G A+ + F + + LA +A
Sbjct: 202 CPVSDGAAAVVLASEERARELTDRPV-WILGVGAASDTPSLSERDDFLSLDAARLAARRA 260
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQ------------------VNAHG 353
AG+ ID E+ + F++ + + LG + VN G
Sbjct: 261 YKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSG 320
Query: 354 GAVSLGHPLGCSGARILVTLLGVLRHKKGKY-----GVGGICNGGGGASALV 400
G +S GHPLG +G V + LR + G VG N GG SA V
Sbjct: 321 GLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHNIGGTGSAAV 372
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA 77
VGV TP G S S +L + A AL A ++P + V GN P
Sbjct: 1 VGVGMTP----FGRRSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPG 56
Query: 78 RQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134
A G+ T + +SG AV AA +I G+ D+V+ G E MS+ P
Sbjct: 57 ALIAEYLGLLGKPA-TRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPT 112
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT 94
++A++LG A E A+ A + + V G + A Q A GI +
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS 63
Query: 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+N+ C++G+ A+ LA Q +Q G DIV+AGG E
Sbjct: 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSEE 97
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF---ADAAQ--APEWFTTAPSLAIPKAIAN 314
+I +GA ALVL AL G ++ A+I G+ +DA AP A+ A+A+
Sbjct: 229 VIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALAD 288
Query: 315 AGLEASQIDYYEIN-------EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
AGL IDY IN ++A +++ G + + GH LG +GA
Sbjct: 289 AGLTPEDIDY--INAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGA 346
Query: 368 RILVTLLGVLRHKK 381
+ L LR
Sbjct: 347 VEAIISLLALRDGI 360
|
Length = 412 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLS--- 69
RDV I+GV +T G L VS L A AL+ A + + ++ GN+ +
Sbjct: 2 RDVAIIGVGQTK----FGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 70 ---ANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
++ A A L A IP T + C+SG A+ A ++ G D+V+A G+
Sbjct: 58 VSQEHIAALIADYAGL-APIP----ATRVEAACASGGAALRQAYLAVASGEADVVLAAGV 112
Query: 127 ESMSNAP 133
E M++ P
Sbjct: 113 EKMTDVP 119
|
Length = 389 |
| >gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 9e-07
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 29/139 (20%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAA------QAPEW-FTTAPSLAIP--KA 311
+SDGAAA ++ + A LG + ++ A Q W + P+ I KA
Sbjct: 216 VSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKA 275
Query: 312 IANAGLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNA 351
AG+ ++ E+++ FS+ + + LGL
Sbjct: 276 YREAGITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQI 335
Query: 352 HGGAVSLGHPLGCSGARIL 370
GG GHP+G SG R+L
Sbjct: 336 DGGLKCFGHPIGASGLRML 354
|
Length = 398 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 34/176 (19%)
Query: 258 ASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTT--APSLAIPK 310
S I+DGAAA++L S KA E + I+ A+ + FTT A +A K
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEK 266
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLG----------LDPEQ--------VNAH 352
A AG+E ID E+++ F++ I + LG Q VN
Sbjct: 267 AYKMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPS 326
Query: 353 GGAVSLGHPLGCSGARILVTLLGVLRHKKGKY-------GVGGICN-GGGGASALV 400
GG + GHP+G +G V ++ LR + K G G N GG G +A+V
Sbjct: 327 GGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNVGGTGHTAVV 382
|
Length = 389 |
| >gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 1e-06
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 41/184 (22%)
Query: 259 SIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT---------TAPSLAIP 309
S++SDGAAALVL A L V F A ++ P A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV-----RFRARAHVNDFLPLSRRDPLAFEGPRRAWQ 267
Query: 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNA 351
+A+A AG+ + + E ++ F++ + + +GL P VN
Sbjct: 268 RALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 352 HGGAVSLGHPLGCSG-------ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GG + GHP+G +G A L G ++ K + G+ N GG A A + ++
Sbjct: 328 SGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQIPGAK--LAGVFNMGGAAVANYVSIL 385
Query: 405 QAVR 408
+ V+
Sbjct: 386 ERVK 389
|
Length = 389 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 25/152 (16%)
Query: 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRG------FADAAQAPEWFT-TAPSLAIP 309
++ ISDG+A + S K EL + I G +A A+ EW A LA
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 310 KAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL-------------DPEQ-----VNA 351
+A A + + I+ +++AF++ I + LG E+ VN
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNL 324
Query: 352 HGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383
GG + GHPLG +G ++ + LR + GK
Sbjct: 325 FGGLKAKGHPLGATGLSMIYEITKQLRDEAGK 356
|
Length = 385 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
V + GV TP F +S + + A AL A + VQ+ + G V
Sbjct: 1 NKVFVAGVGMTP---FEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVY---- 53
Query: 73 GQAPARQAAL---G-AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
G + + Q AL G GIP +V +N CS+G A+ LA Q+++ G D +A G E
Sbjct: 54 GDSTSGQRALYEVGMTGIP--IV--NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQ 109
Query: 129 M 129
M
Sbjct: 110 M 110
|
Length = 391 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 40/193 (20%), Positives = 64/193 (33%), Gaps = 11/193 (5%)
Query: 199 AAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT---A 255
AA L A +A + +G+ + +E D S E S T A
Sbjct: 94 AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAA 153
Query: 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFA-----DAAQAPEWFTTAPSLAIPK 310
+ + DGA ALV+ AL G + A+I G A A + A +
Sbjct: 154 ADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKE 213
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGA 367
A+A AGL IDY + + + + L + G+ +
Sbjct: 214 ALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVV 273
Query: 368 RILVTLLGVLRHK 380
+ + +L H
Sbjct: 274 LAVDEAVLMLEHG 286
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGF-----ADAAQAPEWFTTAPSLAIPKAIAN 314
++ +G A LVL S A + G ++ +I GF A APE + AI + +A
Sbjct: 207 VLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLAR 266
Query: 315 AGLEASQIDYY-------EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367
+GL IDY +N+ I L P +V + GH LG SGA
Sbjct: 267 SGLTPEDIDYIHAHGTATRLNDQREANLIQA-----LFPHRVAVSSTKGATGHTLGASGA 321
Query: 368 RILVTLLGVLRHKK 381
+ L LRH++
Sbjct: 322 LGVAFSLLALRHQQ 335
|
Length = 381 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 44/135 (32%)
Query: 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFA---DAAQAPEWFTTAPS-------LAIP 309
++ +GA LVL S A G ++ A+I G+ DA TAP A+
Sbjct: 228 VLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHI-----TAPDPDGEGAARAMR 282
Query: 310 KAIANAGLEASQIDYYEIN------------EAFSVVAIANQKLLGLDPEQVNAHGGAVS 357
A+A+AGL IDY IN E+ AI +++ G ++V VS
Sbjct: 283 AALADAGLSPEDIDY--INAHGTSTPLNDAAES---KAI--KRVFGEHAKKV-----PVS 330
Query: 358 -----LGHPLGCSGA 367
GH LG +GA
Sbjct: 331 STKSMTGHLLGAAGA 345
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW----FTTAPSLAIPKAIANAG 316
I+DGAAA+VL +G +A EL + A I G ++P T +PS A+ A G
Sbjct: 204 ITDGAAAVVLAAGDRAREL-RERPAWITGIEHRIESPSLGARDLTRSPSTALAAEAA-TG 261
Query: 317 LEASQIDYYEINEAFSVVAIANQKLLGL-DPEQVNAHGGAVSLGHPLGCSG-ARI 369
+A +D E++ F+ + ++ LGL D +VN GGA++ +P+ +G RI
Sbjct: 262 GDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERI 315
|
Length = 352 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 75 APARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
A Q A+ G+ PN V T C+SG A+ AA+ I+LG D+V+AGG E++
Sbjct: 139 MAAGQVAIRLGLRGPNYTVSTA----CASGAHAIGDAARLIRLGRADVVIAGGAEALIT 193
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 41/178 (23%)
Query: 259 SIISDGAAALVLVSGVKALEL-GLQVIAKIRGF-------------ADAAQAPEWFTTAP 304
S ++DG A +VL S + + I +I+G+ +A P P
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL---P 276
Query: 305 SL--AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE--------------- 347
+ A+ A AG+ +D +E+++ F+ +GL
Sbjct: 277 HVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIG 336
Query: 348 ---QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG----GGASA 398
+N GG + GHP+G SG R+L+ + G Y V G G GG++
Sbjct: 337 GRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTAGDYQVEGAKTFGTLNIGGSTT 394
|
Length = 403 |
| >gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 3e-04
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91
SS S TKL + A AL +A++ PL + + +L G A QA +GA V
Sbjct: 47 SSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRA---V 103
Query: 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMS 130
I CS + A++ A Q IQ G ++ G +++S
Sbjct: 104 AFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLS 142
|
Length = 326 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 5e-04
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 44/186 (23%)
Query: 259 SIISDGAAALVLVSGVKALELGLQ----VIAKIRGFA--------DAAQAPEWFTTAPSL 306
S +SDG A LVL S ++GL + +I+ A D A FT+
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS--RA 313
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL-DPEQ----------------- 348
A KA++ AG++ S + E+++ F++ + + LG+ +
Sbjct: 314 AAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIP 373
Query: 349 VNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG---------VGGICNGGGGASAL 399
VN GG +S GHP+G +G + ++ V R KG+ G +G N GG
Sbjct: 374 VNTGGGLLSFGHPVGATGVK---QIMEVYRQMKGQCGEYQMKNIPALGATLNMGGDDKTA 430
Query: 400 VLELMQ 405
V ++Q
Sbjct: 431 VSTVLQ 436
|
Length = 438 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.97 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.97 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.97 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.97 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.96 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.96 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.96 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.95 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.95 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.95 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.95 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.95 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.95 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.94 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 99.94 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.94 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.93 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.93 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.93 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.93 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.93 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.92 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.92 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.92 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.92 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.92 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.92 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.92 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.91 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.91 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.91 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.9 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.9 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.9 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.89 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.89 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.88 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.88 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.88 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.88 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.87 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.87 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.87 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.85 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.85 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.84 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.82 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.82 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.81 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.79 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.78 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.78 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.75 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.74 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.69 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.65 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.64 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 99.63 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.53 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 99.35 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.3 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.19 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 99.16 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 98.8 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 98.67 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.52 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.35 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 97.77 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 97.0 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 96.1 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 94.95 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 94.8 | |
| PRK06158 | 384 | thiolase; Provisional | 94.34 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 94.15 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 93.91 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 93.85 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 93.76 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 93.57 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 93.44 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 93.41 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 93.25 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 93.17 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 93.07 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 92.99 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 92.98 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 92.78 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 92.51 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 92.5 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 92.34 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 92.19 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.98 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 91.86 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 91.68 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 91.56 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.52 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 91.35 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 91.35 | |
| PRK06840 | 339 | hypothetical protein; Validated | 91.25 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 91.22 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 91.18 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 91.17 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 91.13 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 91.13 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.01 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 90.95 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 90.92 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 90.91 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 90.86 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 90.8 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.73 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 90.65 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 90.55 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 90.31 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 89.84 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 89.72 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 89.15 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 88.68 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 88.2 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 88.16 | |
| COG1214 | 220 | Inactive homolog of metal-dependent proteases, put | 88.04 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 87.91 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 87.55 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 87.31 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 87.13 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 86.99 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 86.96 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 86.92 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 85.84 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 84.95 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 84.93 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 84.78 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 84.72 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 84.39 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 83.78 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 83.77 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 83.65 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 83.63 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 83.51 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 83.04 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 82.91 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 82.64 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 82.34 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 81.7 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 81.18 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 81.06 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 80.44 |
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-68 Score=532.56 Aligned_cols=390 Identities=47% Similarity=0.721 Sum_probs=341.7
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|||||+++|||+|+.+.+.+.++.+|+.+|+++||+++|++|++||.+++|+..+...+.+++..++..+|++.+.|+
T Consensus 2 ~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 81 (393)
T PRK08235 2 SKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQT 81 (393)
T ss_pred CcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcce
Confidence 68999999999999987788889999999999999999999999999999999987644466777788899999756999
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++|+++|+|++++|..|+.+|++|.+|+|||+|+|+++..|+.....+.+..++.....+.+..+++++++....|+..|
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 161 (393)
T PRK08235 82 ETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYG 161 (393)
T ss_pred eehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999999877532111111112211111111123344444445799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCCC
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 251 (414)
++|+++||+|+|+++++++++|+|+..|+..+.|++||+|++++++.+.+ ..+++|+++|+ +|.|+++++||+++++|
T Consensus 162 ~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p~g 240 (393)
T PRK08235 162 GEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDP-IVVAKDEAPRKDTTIEKLAKLKPVFDKTG 240 (393)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCc-eEeCCCCCCCCCCCHHHHhcCCCcccCCC
Confidence 99999999999999999999999999999999999999999987655544 45789999998 99999999999999889
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
++|++|||+++|||+|+||++++.+++++.+|+++|.+++.....+..+...+..+++++|+++|++++|||++|+||+|
T Consensus 241 ~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e~~d~f 320 (393)
T PRK08235 241 TITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLFEINEAF 320 (393)
T ss_pred cEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCeehhcchh
Confidence 99999999999999999999999999999999889999887655455555567789999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+.+.+.++|.||++++|+|++||++++|||+|+||++++.++++||+++++++++.+.|++||++.++|||+
T Consensus 321 ~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 321 AAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred HHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-68 Score=529.36 Aligned_cols=390 Identities=42% Similarity=0.639 Sum_probs=342.8
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCC
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~ 89 (414)
||++|||||+++|||+++.+.+.+.++.+|+.+|+++||+++|+++++||.+++|+..+... .++.+..++..+|++++
T Consensus 1 ~m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 1 MMREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 56899999999999999878778899999999999999999999999999999999887653 35677777788899756
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchH
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (414)
+|+++|+++|+|++.++..|+++|++|.+|+|||+|+|++|..|+.....+.+..++.....+.+ ...+.+++....|+
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMM-VGALHDPFGTIHMG 159 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhh-cccccccccCCCHH
Confidence 89999999999999999999999999999999999999999877521111111112111111111 12234455445699
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCcc
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~ 248 (414)
+.|++|+++||+|+|++++|++++|+||..|+.++.|++||+|+.++++.++ .++++|+++|+ +|.|+++++||+++
T Consensus 160 ~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~--~~~~~da~~r~~~t~e~v~~~~~v~~ 237 (394)
T PRK09051 160 VTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGE--VVFDTDEHVRADTTLEDLAKLKPVFK 237 (394)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCC--eEECCCCCCCCCCCHHHHcCCCCccc
Confidence 9999999999999999999999999999999999999999999988765443 35789999998 99999999999997
Q ss_pred CC-CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeec
Q 015003 249 EG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (414)
Q Consensus 249 ~~-g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~ 327 (414)
++ |++|++|||+++|||+|+||++++.+++++.+|+++|.|++.....+..+...+..+++++|+++|++++|||++|+
T Consensus 238 ~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~~ei 317 (394)
T PRK09051 238 KENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVIEA 317 (394)
T ss_pred CCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 55 89999999999999999999999999999999989999999988777666677899999999999999999999999
Q ss_pred cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 328 NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 328 hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
||+|++..+.+.|.||++++|+|++||++++|||+|+||++++.++++||+.+++++|++.+|++||++.++|+|+
T Consensus 318 ~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~~~g~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 318 NEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGGRYALVTMCIGGGQGIAAIFER 393 (394)
T ss_pred cCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccChhhEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999989999999999999999999997
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-67 Score=524.41 Aligned_cols=392 Identities=38% Similarity=0.573 Sum_probs=342.2
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|++++|||.+++|+..+.+.+++.+.+++..+|++++.|+
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~ 81 (404)
T PRK06205 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPG 81 (404)
T ss_pred CceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCce
Confidence 68999999999999988888899999999999999999999999999999999998877778888889999999766899
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccc---ccc-cCCch
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW---DVY-NDFGM 168 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~ 168 (414)
++|+.+|+|++.++..|+++|++|.+|+|||+|+|+++..|......+.+..++.....+.+..+.+. ..| ....|
T Consensus 82 ~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 161 (404)
T PRK06205 82 MQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGM 161 (404)
T ss_pred eehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCH
Confidence 99999999999999999999999999999999999999866321111111111111011111111111 111 13456
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
+..|++|+++||+|+|++++|++++|+||..+++++.|.+||+|++.+++.++| ..+++|+++|+ +|.|+++++||++
T Consensus 162 ~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~ 240 (404)
T PRK06205 162 IETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-TVVDRDEHPRADTTLESLAKLRPIM 240 (404)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCc-eEeccCCCCCCCCCHHHHhcCCCcC
Confidence 668999999999999999999999999999999999999999999987765566 45789999999 9999999999999
Q ss_pred ---cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCce
Q 015003 248 ---KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (414)
Q Consensus 248 ---~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~ 324 (414)
++.|++|++|||+++|||+|+||++++.+++++.+|+++|.|++...+.+..+..++..+++++|+++|++++|||+
T Consensus 241 ~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~ 320 (404)
T PRK06205 241 GKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDIDL 320 (404)
T ss_pred ccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCCHHHCCE
Confidence 56689999999999999999999999999999999989999999887766666678899999999999999999999
Q ss_pred eeccccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 325 YEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
+|+||+|+++.+.++|.|||++ +++|++||++++|||.|+||++++.|+++||+++++++||++.|++||++.++||
T Consensus 321 ~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg~g~a~~~ 400 (404)
T PRK06205 321 IELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQGLAAVF 400 (404)
T ss_pred eeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCChhhEEEE
Confidence 9999999999999999999997 5899999999999999999999999999999998889999999999999999999
Q ss_pred EEec
Q 015003 402 ELMQ 405 (414)
Q Consensus 402 ~~~~ 405 (414)
|+.+
T Consensus 401 e~~~ 404 (404)
T PRK06205 401 ERVN 404 (404)
T ss_pred EecC
Confidence 9853
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-67 Score=524.71 Aligned_cols=383 Identities=45% Similarity=0.670 Sum_probs=336.1
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++.+.+++..+|++.++|.
T Consensus 2 ~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~ 81 (388)
T PRK06366 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTK 81 (388)
T ss_pred CcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcc
Confidence 68999999999999988878889999999999999999999999999999999886544456677889999999756899
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhh-hhccCCC--C-CCccccccccccccccccCCch
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARKGSRL--G-HDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~-~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
++++++|+|++.++..|+++|++|++|+|||+|+|+++..|+.... .+.+..+ . .....+.+...++.+|+.+..|
T Consensus 82 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~m 161 (388)
T PRK06366 82 YTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHM 161 (388)
T ss_pred eeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccH
Confidence 9999999999999999999999999999999999999976643211 0001100 0 0000011112345555545678
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCcc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
++.|++|+++||+|+|++++|++++|+||..||+++.|+++|+|+. -+++|+.++++|.|+++++||+++
T Consensus 162 al~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~----------~~~~d~~~r~~t~e~~~~s~~v~~ 231 (388)
T PRK06366 162 GVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN----------DLDRDEGIRKTTMEDLAKLPPAFD 231 (388)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCccccccccc----------ccccccCcccCCHHHHhhCCCccC
Confidence 9999999999999999999999999999999999999999988853 056899999999999999999999
Q ss_pred CCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeecc
Q 015003 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (414)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~h 328 (414)
++|++|++|||+++|||+|+||+|++++++++.+|.++|.+++.....+.++...+..+++++|+++|++++|||++|+|
T Consensus 232 p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~ 311 (388)
T PRK06366 232 KNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHN 311 (388)
T ss_pred CCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHHcceeecc
Confidence 88899999999999999999999999999999888789999999877666666677899999999999999999999999
Q ss_pred ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEec
Q 015003 329 EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 329 d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
|+|+++++.++|.|||+.+|+|++||.+++|||.|+||++++.++++||+.++++++++++|++||++.++|||+++
T Consensus 312 daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~~~ 388 (388)
T PRK06366 312 EAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTLEMVE 388 (388)
T ss_pred chhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCCCeEEEEEecccChhhEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999863
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-66 Score=514.93 Aligned_cols=390 Identities=45% Similarity=0.735 Sum_probs=344.3
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|||||+++|||+|+.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+...+++++..++..+|++.+.|+
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~ 81 (393)
T PRK05656 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPA 81 (393)
T ss_pred CcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcce
Confidence 68999999999999988888889999999999999999999999999999999987655567788889999999755899
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++|+++|+|++.++..|+++|++|.+|++||+|+|+++..|+.....+.+..++.....+....+++++.+....|++.|
T Consensus 82 ~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05656 82 MTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITA 161 (393)
T ss_pred EEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHH
Confidence 99999999999999999999999999999999999999877532111111112110001111123445544345799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCCC
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 251 (414)
++|+++||+|+|++++|++++|+++..|+..+.|+++|+|+++++..++| ..++.|+.+|+ ++.|.+.+++|+|.++|
T Consensus 162 ~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~-~~~~~D~~~r~~~~~e~l~~l~p~~~~~g 240 (393)
T PRK05656 162 ENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEP-LAFATDEQPRAGTTAESLAKLKPAFKKDG 240 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCc-eEeccCCCCCCCCCHHHHhcCCCCcCCCC
Confidence 99999999999999999999999999998888999999999887766666 45789999998 99999999999997778
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+..+..++..+++++|+++|++++|||++++||+|
T Consensus 241 ~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~f 320 (393)
T PRK05656 241 SVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAF 320 (393)
T ss_pred CEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCcc
Confidence 99999999999999999999999999999998899999998876666666688899999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+...+.+.|.||++++|+|++||++++|||.|++|++++.++++||+.++++++|+++|++||++.++|||+
T Consensus 321 ~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 321 AAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred HHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCCCEEEEEEcccCcceEEEEEec
Confidence 999999999999999999999999999999999999999999999998888999999999999999999996
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-65 Score=513.05 Aligned_cols=391 Identities=51% Similarity=0.760 Sum_probs=339.7
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+++.+..+|+.+|+++||+|+|++++|||.+++|+..+...++.++..++..+|++.+.+.
T Consensus 2 ~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~ 81 (393)
T PRK05790 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPA 81 (393)
T ss_pred CceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCce
Confidence 68999999999999987777789999999999999999999999999999999887654556666667778888645789
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++++++|+|++.+|..|+.+|++|.+|+|||+|+|+++..|......+.+..++.....+.+...+.++++.+..|++.|
T Consensus 82 ~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 161 (393)
T PRK05790 82 LTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITA 161 (393)
T ss_pred eeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHH
Confidence 99999999999999999999999999999999999998866421111111111110011111112233444456899999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCCC
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 251 (414)
++||++||+|+|+++++++++|+||..|++++.|+++|+|+++.....+| +.++.|+.++. ++.|++..++|+++++|
T Consensus 162 ~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~-~~~~~d~~~~~~~~~e~l~~~~~v~~~~g 240 (393)
T PRK05790 162 ENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDP-VVVDTDEHPRPDTTAESLAKLRPAFDKDG 240 (393)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCc-eEecCCCCCCCCCCHHHHhCCCCccCCCC
Confidence 99999999999999999999999999999999999999999887665666 44688999998 99999999999998779
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
++|++|||+++|||+|+||++++.+++++.++.++|.|++.....+......+..+++++|+++|++++|||++++||+|
T Consensus 241 ~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f 320 (393)
T PRK05790 241 TVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAF 320 (393)
T ss_pred CEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHH
Confidence 99999999999999999999999999999899889999999876655555567889999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+++.+.++|.||+++.|+|++||++++|||+|+||++++.|+++||++++++++|++.|++||++.++|||+.
T Consensus 321 ~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 321 AAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred HHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999889999999999999999999974
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=512.65 Aligned_cols=391 Identities=50% Similarity=0.789 Sum_probs=337.7
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
.++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+++.+++.+...+..+|++.++|
T Consensus 6 ~~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p 85 (397)
T PRK06954 6 QDPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVG 85 (397)
T ss_pred CCCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCcc
Confidence 35899999999999998777888999999999999999999999999999999988866655666666777888876699
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc-CCchHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN-DFGMGV 170 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 170 (414)
+++|+++|+|++.++..|+.+|++|.+|++||+|+|+++..|+.....+.+..++.....+.+..+.+++.+. +..|+.
T Consensus 86 ~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (397)
T PRK06954 86 CTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGT 165 (397)
T ss_pred EeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHH
Confidence 9999999999999999999999999999999999999998665322111111122111111111123223332 467999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
.|++|+++||+|+|+++++++++|+|+..+...+.|++++.|+++++..+.+ .++.|+.+|+++.+.+.+.+|+|+++
T Consensus 166 ~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~--~v~~D~~pr~~~~~~l~~l~~~f~~~ 243 (397)
T PRK06954 166 FAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDT--VIDRDEQPFKANPEKIPTLKPAFSKT 243 (397)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCe--EeccCCCcCCCCHHHHhCCCCccCCC
Confidence 9999999999999999999999999999865567888899999887654443 48899999999999999999999988
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
|++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+..+..++..+++++|+++|++++|||++|+||+
T Consensus 244 g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~d~ 323 (397)
T PRK06954 244 GTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINEA 323 (397)
T ss_pred CcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCEEehhhH
Confidence 99999999999999999999999999999999988999988765555556667889999999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
|+++++..+|.||++++|+|++||++++|||.|+||++++.++++||+++++++||+++|++||++.++|||+.
T Consensus 324 fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 324 FAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred HHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchhhEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999973
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-65 Score=508.22 Aligned_cols=388 Identities=36% Similarity=0.560 Sum_probs=342.8
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~ 90 (414)
++|+|+|+++|||+|+.+.+.+.++.+|+.+|++++|++ +|++|++||.+++|+..+... +++++..++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~v 81 (400)
T PRK13359 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGV 81 (400)
T ss_pred CcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 579999999999999888888999999999999999995 699999999999999886553 588999999999998779
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCC-cccccc-----cccccccccc
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGM-----LKDGLWDVYN 164 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~ 164 (414)
|+++|++.|+|+++|+..|+++|++|++|++|++|+|+||..|+..... +..++.. ...+.. ...+++++|.
T Consensus 82 p~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T PRK13359 82 PGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKA--ESAFSRQAEIFDTTIGWRFVNPLMKQLYG 159 (400)
T ss_pred ceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccc--cccccCCcccccccccccccCCccccccc
Confidence 9999999999999999999999999999999999999999988632111 1111100 001110 1134455555
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
...|+..|++++++||+|||++++|+++||+++..+...+.|++||+|++++++...+ .++..|+.+|++|.|++++++
T Consensus 160 ~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~-~~~~~De~~r~~t~e~l~~l~ 238 (400)
T PRK13359 160 VDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDP-LVVSRDEHPRETTLEALAKLK 238 (400)
T ss_pred cCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCc-eeecCCCCCCCCCHHHHhcCC
Confidence 6789999999999999999999999999999988888888999999999886543333 458899999999999999999
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCce
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~ 324 (414)
|+|+++|++|+++||+++|||+|+||++++.+++++.+++++|.|++....++..+..++..+++++|+++|++++|||+
T Consensus 239 p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~DID~ 318 (400)
T PRK13359 239 GVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLDQFDV 318 (400)
T ss_pred CccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHHHcCc
Confidence 99988899999999999999999999999999999999999999999886566666678889999999999999999999
Q ss_pred eeccccchhHHHHHHHHcCCCC--CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 325 YEINEAFSVVAIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lGl~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
+++||+|+.+.+.++|.||+++ .|+|++||.+++|||+|++|++++.++++||+++++++|+++.|++||++.++|||
T Consensus 319 iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~~~~c~~gG~g~a~~ie 398 (400)
T PRK13359 319 IELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIAIE 398 (400)
T ss_pred CccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeEEEEEcccCCceeEEEEE
Confidence 9999999999999999999964 69999999999999999999999999999999999999999999999999999999
Q ss_pred E
Q 015003 403 L 403 (414)
Q Consensus 403 ~ 403 (414)
+
T Consensus 399 ~ 399 (400)
T PRK13359 399 R 399 (400)
T ss_pred e
Confidence 7
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-65 Score=506.78 Aligned_cols=374 Identities=37% Similarity=0.532 Sum_probs=335.6
Q ss_pred CceEEEeeecCcccc--CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCC
Q 015003 13 RDVCIVGVARTPMGG--FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~--~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~ 89 (414)
++|+|||..+|||+| +.+++.+.++.+|+.+|++++|+++|++|++||.+++|+..+... +++.+...+..+|++++
T Consensus 2 ~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~ 81 (402)
T PRK08242 2 TEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPET 81 (402)
T ss_pred CcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCC
Confidence 679999999999999 478999999999999999999999999999999999999987653 46788888889999767
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccc-cccCCch
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD-VYNDFGM 168 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 168 (414)
+|+++|+++|+|+++||..|+.+|++|.+|++|++|+|++|..|+... +..+ ..+.+++ ++....|
T Consensus 82 ~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~----~~~~---------~~~~~~~~~~~~~~m 148 (402)
T PRK08242 82 VPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSD----GGAW---------AMDPSTNFPTYFVPQ 148 (402)
T ss_pred CCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCccccc----Cccc---------ccCcccccccccCCH
Confidence 999999999999999999999999999999999999999999775221 0000 1122222 3334578
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
+..|++|+++||+|||++++|+++||+||..++.++.|.+||+|++. +.++ ..+++|+.+|+ +|.|++.++||+|
T Consensus 149 g~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~--~~~~--~~~~~de~~r~~~t~e~l~~l~p~f 224 (402)
T PRK08242 149 GISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD--QNGL--TILDHDEHMRPGTTMESLAKLKPSF 224 (402)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec--CCCC--EeeCCCCCCCCCCCHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999972 2222 34889999998 9999999999999
Q ss_pred cC----CC-----------------ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHH
Q 015003 248 KE----GG-----------------SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306 (414)
Q Consensus 248 ~~----~g-----------------~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 306 (414)
.+ +| ++|+.+||+++|||+|+||++++++++++.+++++|.|++...+.+..+..++..
T Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~ 304 (402)
T PRK08242 225 AMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVP 304 (402)
T ss_pred cCccccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHH
Confidence 76 34 5899999999999999999999999999998889999999987766666778889
Q ss_pred HHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 307 a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
+++++|+++|++++|||++|+||+|+.+.+.++|.||++++|+|++||++++|||+|+||++++.++++||+.+++++|+
T Consensus 305 a~~~al~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~~~g~ 384 (402)
T PRK08242 305 ATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRGKRTAL 384 (402)
T ss_pred HHHHHHHHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred EeecccccceeeEEEEE
Q 015003 387 GGICNGGGGASALVLEL 403 (414)
Q Consensus 387 ~~~~~~gg~~~a~vl~~ 403 (414)
+++|+|||++.++|||+
T Consensus 385 ~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 385 ITLCVGGGMGIATIIER 401 (402)
T ss_pred EEEcccCCceeEEEEEe
Confidence 99999999999999997
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-65 Score=508.54 Aligned_cols=391 Identities=41% Similarity=0.615 Sum_probs=342.4
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
|.++|+|||..+|||+|+.+.+.+.++.+|+.++++++|+|+|++|++||.+++|+..+...+++.+.+++..+|++.++
T Consensus 1 ~~~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 1 MTKPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCCCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc
Confidence 55789999999999999889999999999999999999999999999999999999887666778888899999998679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++|+++|+||+.|+..|+.+|++|++|++||+|+|++|..|..... +....++.....+.+..+++.+++....|++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYI-RAGAKFGDIKMVDLMQYDGLTDVFSGVFMGI 159 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhc-ccccccCcchhhhhhcccccccccCcchHHH
Confidence 999999999999999999999999999999999999999976632110 0011111110111111223333344457999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
.|++|+++||+|+|++++|++++|+|+..|+.++.|+++|+|++++...+. ..++.|+.+|+ ++.|.+.+++|+|++
T Consensus 160 ~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~--~~~~~d~~~rp~~~~e~l~~l~p~~~~ 237 (392)
T PRK06633 160 TAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTT--SLFDHDETVRPDTSLEILSKLRPAFDK 237 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCc--eeeccCCCCCCCCCHHHHccCCCccCC
Confidence 999999999999999999999999999999999999999999887543222 35889999999 888888888999987
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++|||+++||++++.+++++.+++++|.|++...+++..+...+..+++++|+++|++++|||++|+||
T Consensus 238 ~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~d 317 (392)
T PRK06633 238 NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIEVNE 317 (392)
T ss_pred CCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeeehhh
Confidence 89999999999999999999999999999999998999999998877766666778999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+|+++.+.+.|.||++..|+|++||++++|||+|+||++++.++++||+++++++++++.|++||++.+++||++
T Consensus 318 afa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~~~~~g~~~~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 318 AFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKAKKGLVTLCIGGGMGMAMCVEAV 392 (392)
T ss_pred HHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEecccChhheEEEEeC
Confidence 999999999999999988999999999999999999999999999999999889999999999999999999974
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-65 Score=507.90 Aligned_cols=388 Identities=40% Similarity=0.586 Sum_probs=341.0
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALK-RANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~-dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~ 90 (414)
++|||||+++|||+|+.+.++++++.+|+.+|++++|+ ++|+++++||.+++|+..+... +++++..++..+|++.++
T Consensus 1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 46999999999999988888899999999999999999 5899999999999998875443 478898999999998679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCC-ccccc-----ccccccccccc
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDG-----MLKDGLWDVYN 164 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~ 164 (414)
|+++|+++|+||+.|+..|+.+|++|++|++|++|+|+||..|+..... +..++.. ...+. ....++++.|.
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKA--DSAFSRSAKIEDTTIGWRFINPLMKALYG 158 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCccccccc--ccccccccccccccccccccCcccccccc
Confidence 9999999999999999999999999999999999999999877521110 1111100 00010 01123344455
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~ 243 (414)
...|+..|++|+++||+|+|++++|+++||+++..++.++.|.+||+|+.++++.+++ ..+++|+++|+ +|.|+++++
T Consensus 159 ~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~-~~~n~da~~r~~~t~e~l~~~ 237 (400)
T TIGR02430 159 VDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEP-TVVDQDEHPRPETTLEGLAKL 237 (400)
T ss_pred cCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCc-eeeCCCCccCCCCCHHHHhcC
Confidence 6789999999999999999999999999999999999999999999999988765533 34789999998 999999999
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCc
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
||+++++|++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+......+..+++++|+++|++++|||
T Consensus 238 ~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DID 317 (400)
T TIGR02430 238 KPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQFD 317 (400)
T ss_pred CCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHHCC
Confidence 99998789999999999999999999999999999998888999999887655655666778999999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCC--CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
++++||+|+.+.+.++|.||+++ .|+|++||.+++|||+|++|+++++|+++|||++++++|++..|++||++.++||
T Consensus 318 ~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~g~a~~~ 397 (400)
T TIGR02430 318 VIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQGIALAI 397 (400)
T ss_pred CcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccChhhEEEE
Confidence 99999999999999999999976 6999999999999999999999999999999999999999999999999999999
Q ss_pred EE
Q 015003 402 EL 403 (414)
Q Consensus 402 ~~ 403 (414)
|+
T Consensus 398 e~ 399 (400)
T TIGR02430 398 ER 399 (400)
T ss_pred Ee
Confidence 96
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-65 Score=507.27 Aligned_cols=388 Identities=40% Similarity=0.587 Sum_probs=342.1
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALK-RANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~-dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~ 90 (414)
++|+|||+++|||+|+.+.+.+.++.+|+.+|++++|+ ++|+++++||.+++|+..+... +++++..++..+|++.++
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v 81 (401)
T PRK09050 2 TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV 81 (401)
T ss_pred CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC
Confidence 68999999999999988888899999999999999999 5899999999999999876554 477888899999998679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCC-CCcccccc-----cccccccccc
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLG-HDTIVDGM-----LKDGLWDVYN 164 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~ 164 (414)
|+++|+++|+||+.|+..|+++|++|++|++||+|+|+||..|+.....+ ..++ .....+.. ...++.+.|.
T Consensus 82 P~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (401)
T PRK09050 82 PGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKAD--SAFSRQAEIFDTTIGWRFVNPLMKAQYG 159 (401)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchh--hhcccCcccccccccccccCCccccccc
Confidence 99999999999999999999999999999999999999999875221111 1111 00001100 0123334455
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~ 243 (414)
...|+..|++|+++||+|||++|+|+..+|+++..+.+++.|++||+|+++++..+++ .++++|+++|+ +|.|+++++
T Consensus 160 ~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~-~~~~~da~~r~~~t~e~l~~l 238 (401)
T PRK09050 160 VDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDP-VVVDRDEHPRPETTLEALAKL 238 (401)
T ss_pred cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcC
Confidence 5789999999999999999999999999999999999999999999999887654554 45889999998 999999999
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCc
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
+|+|+++|++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+......+..+++++|+++|++++|||
T Consensus 239 ~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId 318 (401)
T PRK09050 239 KPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTIDQFD 318 (401)
T ss_pred CCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCC
Confidence 99998779999999999999999999999999999998888999999988666655666788999999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCC--CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
++|+||+|+.+.+.++|.||+++ .|+|++||.+++|||.|++|++++.|+++||+++++++++++.|++||++.++++
T Consensus 319 ~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~g~a~~~ 398 (401)
T PRK09050 319 VIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIALAI 398 (401)
T ss_pred ccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccceeEEEE
Confidence 99999999999999999999976 5999999999999999999999999999999999999999999999999999999
Q ss_pred EE
Q 015003 402 EL 403 (414)
Q Consensus 402 ~~ 403 (414)
|+
T Consensus 399 e~ 400 (401)
T PRK09050 399 ER 400 (401)
T ss_pred Ee
Confidence 97
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-64 Score=500.77 Aligned_cols=383 Identities=34% Similarity=0.547 Sum_probs=335.8
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~~~~ 91 (414)
++|+|||+++|||+|+.+.+.++++.+|+.+|++++|+++|+++++||.+++|+..+.. .+++.+..+....|++.++|
T Consensus 2 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP 81 (390)
T PRK06504 2 AEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP 81 (390)
T ss_pred CceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc
Confidence 57999999999999988888899999999999999999999999999999999887533 24677777777778876799
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhh-hccCCCCCCcccccccccccccccc--CCch
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYN--DFGM 168 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 168 (414)
+++|+.+|+||+.|+..|+++|++|.+|++||+|+|+||..|+..... +.+..++. ...+++++++. ...+
T Consensus 82 ~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 82 GTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGH------YKSPGMEERYPGIQFSQ 155 (390)
T ss_pred eEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCcccccccccccccccc------ccccccccccCCCCCCH
Confidence 999999999999999999999999999999999999999877532111 10111111 01123334332 2356
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
+..++.++++||+|+|++++|++++|++|..|+.++.|++||+|++++++.++| ..+..||.+|+ +|+|++++++|++
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~-~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSG-EMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCc-eEEccCCCCCCCCCHHHHhcCCCCC
Confidence 777999999999999999999999999999999999999999999887766677 34789999998 9999999999996
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeec
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~ 327 (414)
.+|++|++|||+++|||+|+||+|++.+++++.++..+|.+++....++..+...+..+++++|+++|++++|||++|+
T Consensus 235 -~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei 313 (390)
T PRK06504 235 -EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEV 313 (390)
T ss_pred -CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 3589999999999999999999999999999988877999988776666556678889999999999999999999999
Q ss_pred cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 328 NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 328 hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
||+|+++.+.++|.|||+++|+|++||++++|||+|++|++++.++++|||++.+++++.+.|++||++.++|||+
T Consensus 314 ~d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 314 NEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred cccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhhCCCeEEEEEeecccceeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999889999999999999999999986
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-64 Score=499.98 Aligned_cols=379 Identities=35% Similarity=0.477 Sum_probs=332.0
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~~ 91 (414)
++|||+|+++|||+|+.+++.+.++.+|+.++++++|+|+|++|++||.+++|+...... +.+++..+++.+|++.++|
T Consensus 2 ~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p 81 (387)
T PRK07850 2 GNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVG 81 (387)
T ss_pred CcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCc
Confidence 689999999999999888888899999999999999999999999999999998875443 3567888888999986799
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
+++|+++|+||+.|+..|++.|++|++|++||+|+|+||..|+.... +..++..... .++ +....++..
T Consensus 82 ~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~---~~~~~~~~~~-------~~~-~~~~~m~~~ 150 (387)
T PRK07850 82 ATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANA---GPGRGLPRPD-------SWD-IDMPNQFEA 150 (387)
T ss_pred eEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccc---cccccCcccc-------ccc-cCcchHHHH
Confidence 99999999999999999999999999999999999999997742110 1111110000 011 112345678
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecC--CCCCCce---eeecCCCccccCHHHHhcCCCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSS--GRGKPFI---IVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~--~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
|++|+++||+|+|++++|++++|+|+..++.++.|++||+|+.++. +.++|+. .++.|+.++.+|.|++++++|+
T Consensus 151 ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~ 230 (387)
T PRK07850 151 AERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPV 230 (387)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCC
Confidence 9999999999999999999999999999999999999999998753 2223332 3789999999999999999999
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceee
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~ 326 (414)
+ .+|.+|++|||+++|||+|+||++++.+++++.++.++|.+++.....+.....++..+++++|+++|++++|||++|
T Consensus 231 ~-~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~e 309 (387)
T PRK07850 231 L-EGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVE 309 (387)
T ss_pred C-CCCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeee
Confidence 8 567789999999999999999999999999998888999999987666666667788999999999999999999999
Q ss_pred ccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 327 INEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 327 ~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+||+|+++.+.++|.||++.+|+|++||.+++|||.|+||++++.|+++||+.+++++|++++|++||++.+++||+
T Consensus 310 i~d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 310 INEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred ecccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCceeEEEEEe
Confidence 99999999999999999998999999999999999999999999999999999989999999999999999999997
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-64 Score=500.49 Aligned_cols=383 Identities=37% Similarity=0.578 Sum_probs=334.2
Q ss_pred CCCceEEEeeecCcccc-CCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~AL~dA-gi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~ 87 (414)
.|++|+|||+++|||+| +.+.+.+.+..+|+.+|+++||+++ |+++++||.+++|++.++.. +++.+..+...+|++
T Consensus 4 ~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~ 83 (399)
T PRK09052 4 QLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLP 83 (399)
T ss_pred CCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCC
Confidence 34789999999999999 6788888999999999999999997 99999999999998886553 456666677778997
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
..+|+++|+++|+|++.|+..|+.+|++|++|+|||+|+|++|..|+.... . .... ...+. ..++.+ ...
T Consensus 84 ~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~--~--~~~~-~~~~~--~~~~~~---~~~ 153 (399)
T PRK09052 84 NSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNK--P--SMSP-AIFAR--DENVGI---AYG 153 (399)
T ss_pred CCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcc--c--ccCc-chhcc--CCcccc---cch
Confidence 448999999999999999999999999999999999999999987631100 0 0000 00000 001111 257
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCC-----CCC---CceeeecCCCccc-cCHH
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG-----RGK---PFIIVDKDEGLEK-FDAA 238 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~-----~~~---p~~~~~~~~~~~~-~~~~ 238 (414)
|+..|++|+++||+|+|+++++++++|+|+..|++++.|+++|+|+++... .+. .+.++..|+.+|+ ++.|
T Consensus 154 ~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e 233 (399)
T PRK09052 154 MGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLE 233 (399)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHH
Confidence 999999999999999999999999999999999999999999999876532 111 1125789999999 9999
Q ss_pred HHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCC
Q 015003 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE 318 (414)
Q Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~ 318 (414)
.+.+.+|+|.++|++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+..+...+..+++++|+++|++
T Consensus 234 ~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~ 313 (399)
T PRK09052 234 GLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLK 313 (399)
T ss_pred HHhcCCCccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCC
Confidence 99999999987899999999999999999999999999999999989999999988777766778899999999999999
Q ss_pred CCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceee
Q 015003 319 ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398 (414)
Q Consensus 319 ~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a 398 (414)
++|||++|+||+|+++.+.++|.||+++.|+|++||.+++|||.|++|++++.++++||+.+++++|+++.|++||++.+
T Consensus 314 ~~did~~ei~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~~~g~~~~c~~gg~g~a 393 (399)
T PRK09052 314 QDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYGMVTMCVGTGMGAA 393 (399)
T ss_pred HHHcCEEEeCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred EEEEE
Q 015003 399 LVLEL 403 (414)
Q Consensus 399 ~vl~~ 403 (414)
+|||+
T Consensus 394 ~~~e~ 398 (399)
T PRK09052 394 GIFER 398 (399)
T ss_pred EEEEe
Confidence 99996
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-64 Score=499.85 Aligned_cols=389 Identities=37% Similarity=0.540 Sum_probs=338.6
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~~ 91 (414)
++|+|||+.+|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+... +++++.+++..+|+++++|
T Consensus 2 ~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p 81 (401)
T PRK08131 2 LDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVP 81 (401)
T ss_pred CcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCc
Confidence 689999999999999888888899999999999999999999999999999999876543 5778888999999986799
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCC-ccccccc-----cccccccccC
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGML-----KDGLWDVYND 165 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~ 165 (414)
+++|+++|+||+.|+..|+.+|++|++|++||+|+|++|..|+..... +..++.. ...+... ...+.+.|..
T Consensus 82 ~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (401)
T PRK08131 82 GQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKA--ESAFSRDAKVFDTTIGARFPNPKIVAQYGN 159 (401)
T ss_pred eeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCccccccc--ccccccCcchhhhhhcccccCccccccccc
Confidence 999999999999999999999999999999999999999877532111 0011100 0011100 0112222444
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLR 244 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~ 244 (414)
..|+..|++|+++||+|+|++++|+++||+++..+.+++.|+++++|+++++....|...+..|+.+|+ +|.|.+.++|
T Consensus 160 ~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~ 239 (401)
T PRK08131 160 DSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLK 239 (401)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCC
Confidence 678899999999999999999999999999999999888899999999886543343334889999999 9999999999
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCce
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDY 324 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~ 324 (414)
|+| ++|++|++|||+++|||+|+||++++.+++++.++.++|.+++...+.+..+..++..+++++|+++|++++|||+
T Consensus 240 p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~ 318 (401)
T PRK08131 240 PLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDDMDI 318 (401)
T ss_pred CCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHHCCe
Confidence 999 5799999999999999999999999999999988989999999988776666678899999999999999999999
Q ss_pred eeccccchhHHHHHHHHcCCC--CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 325 YEINEAFSVVAIANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lGl~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
+|+||+|+++.+.++|.|||+ ..|+|++||.+++|||.|+||++++.|+++||+++++++++..+|.+||++.++|||
T Consensus 319 ~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~~~~~~~~~~~ggg~g~a~i~e 398 (401)
T PRK08131 319 IEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVIE 398 (401)
T ss_pred ehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcCCCceEEEEEecCChhhEEEEE
Confidence 999999999999999999996 458999999999999999999999999999999998899999999999999999999
Q ss_pred Ee
Q 015003 403 LM 404 (414)
Q Consensus 403 ~~ 404 (414)
+.
T Consensus 399 ~~ 400 (401)
T PRK08131 399 RV 400 (401)
T ss_pred ec
Confidence 74
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-64 Score=500.74 Aligned_cols=384 Identities=35% Similarity=0.559 Sum_probs=331.0
Q ss_pred CceEEEeeecCccccC------CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCC
Q 015003 13 RDVCIVGVARTPMGGF------LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAG 85 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~------~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lg 85 (414)
++|+|||+++|||+|+ .++++++++.+|+.+|+++||+|+|+++++||.+++|+..++.. ..+.+.......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 6899999999999997 37788899999999999999999999999999999999887543 2344444444444
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCC-Ccccccccccccccccc
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGH-DTIVDGMLKDGLWDVYN 164 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 164 (414)
++++.|+++|+++|+|++.++..|+++|++|.+|+|||+|+|+++..|+. .. ...... ....++.. .. ++.+.
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~-~~---~~~~~~~~~~~~~~~-~~-~~~~~ 155 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMG-DN---PHIEPNPKLLTDPKY-IE-YDLTT 155 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccc-cC---ccccCChhhcccccc-Cc-ccccC
Confidence 54468999999999999999999999999999999999999999976642 10 000000 00001111 11 22222
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~ 243 (414)
...|++.|++|+++||+|+|+++++++++|+|+..|+..+.|++||+|+++. +.+.+ ..+++|+++|+ +|.|+++++
T Consensus 156 ~~~~a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~~~~~-~~~npda~~r~~~t~e~~~~~ 233 (394)
T PRK06445 156 GYVMGLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-VEGKK-KVVDVDQSVRPDTSLEKLAKL 233 (394)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-CCCCc-eeeCCCCCCCCCCCHHHHhcC
Confidence 3459999999999999999999999999999999999999999999999884 44444 45789999998 999999999
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCc
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
+|+++++|++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+......+..+++++|+++|++++|||
T Consensus 234 ~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId 313 (394)
T PRK06445 234 PPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDID 313 (394)
T ss_pred CCccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcC
Confidence 99998889999999999999999999999999999999998999999998776665666788999999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
++|+||+|+++++..+|.||++++|+|++||++++|||.|+||++++.++++||+-++++++|++.|++||++.++|||+
T Consensus 314 ~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 314 LWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred EEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCEEEEEEcccCChhhEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999997778899999999999999999996
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 394 ~ 394 (394)
T PRK06445 394 V 394 (394)
T ss_pred C
Confidence 3
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-64 Score=504.17 Aligned_cols=388 Identities=30% Similarity=0.477 Sum_probs=332.2
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+++|++|++||.+++|+..+...+++++..++..+|+++.+|+
T Consensus 5 ~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~ 84 (428)
T PRK08963 5 DRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDA 84 (428)
T ss_pred CeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcc
Confidence 57999999999999987888889999999999999999999999999999999887655567788889999999866999
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhh--h------ccCCCCCC----c---ccccc-cc
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA--R------KGSRLGHD----T---IVDGM-LK 156 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~--~------~~~~~~~~----~---~~~~~-~~ 156 (414)
++|+++|+|++.|+..|+++|++|.+|+|||+|+|++|..|+.+... + ....++.. . ..+.+ ..
T Consensus 85 ~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (428)
T PRK08963 85 YSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVP 164 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccC
Confidence 99999999999999999999999999999999999999877532110 0 00000100 0 00000 00
Q ss_pred ccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-c
Q 015003 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (414)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~ 235 (414)
.+++++.....|+..|++|+++||+|+|+++++++++|+|+..|++++.|.+||+|+.++++.. .++.|+.+|+ +
T Consensus 165 ~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~----~~~~D~~~r~~~ 240 (428)
T PRK08963 165 PAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQ----PLEEDNNIRGDS 240 (428)
T ss_pred cccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCce----eeCCCCCCCCCC
Confidence 1222211234699999999999999999999999999999999999999999999998754331 2889999998 9
Q ss_pred CHHHHhcCCCCccC-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-ccccchHHHHHHHHH
Q 015003 236 DAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-WFTTAPSLAIPKAIA 313 (414)
Q Consensus 236 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-~~~~~~~~a~~~al~ 313 (414)
|.|+|+++||++++ +|++|++|||+++|||+|+||++++.+++++.++.++|.+++....++. .+...+..+++++|+
T Consensus 241 t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al~ 320 (428)
T PRK08963 241 TLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALE 320 (428)
T ss_pred CHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHHHHHHHH
Confidence 99999999999973 4889999999999999999999999999999999889999988764442 234566789999999
Q ss_pred HcCCCCCCCceeeccccchhHHHHHHHHcC-----------------CCCCCcCCCCCccccCCCccchHHHHHHHHHHH
Q 015003 314 NAGLEASQIDYYEINEAFSVVAIANQKLLG-----------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (414)
Q Consensus 314 ~aGl~~~DId~~~~hd~~~~~~~~~~e~lG-----------------l~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q 376 (414)
++|++++|||++|+||+|+++++.++|.|| ++.+|+|++||.+++|||+|+||++++.|+++|
T Consensus 321 ~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~~q 400 (428)
T PRK08963 321 RAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHE 400 (428)
T ss_pred HcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHH
Confidence 999999999999999999999999999994 566699999999999999999999999999999
Q ss_pred HHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 377 LRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 377 l~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
|+++++++||++.|++||++.++|||++
T Consensus 401 Lrg~~g~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 401 LRRRGGGLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred HhhcCCCEEEEEEccccChhhEEEEEeC
Confidence 9999999999999999999999999974
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-63 Score=501.92 Aligned_cols=385 Identities=37% Similarity=0.585 Sum_probs=332.8
Q ss_pred CCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCC
Q 015003 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~ 89 (414)
.++|||||+++|||+++ .+.+.+.++.+|+.+|+++||+|+|++++|||.+++|+..+.+. .++.+..++..+|+++.
T Consensus 45 ~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~ 124 (452)
T PLN02287 45 GDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPET 124 (452)
T ss_pred CCCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCC
Confidence 35899999999999985 56667899999999999999999999999999999998876554 34456678888999756
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchH
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (414)
.|+++|+.+|+|++.++..|+.+|++|.+|+|||+|+|+++..|..... .+... .. ..+...+ ....|+
T Consensus 125 ~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~-----~~~~~--~~--~~~~~~~--~~~~~g 193 (452)
T PLN02287 125 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEG-----GVNPR--VE--SFSQAQD--CLLPMG 193 (452)
T ss_pred cceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhcc-----ccCch--hh--ccccccc--cCcCHH
Confidence 8999999999999999999999999999999999999999987632110 00000 00 0011111 124599
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecC-----CCCCCceeeecCCCccc-cCHHHHhcC
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSS-----GRGKPFIIVDKDEGLEK-FDAAKLMKL 243 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~-----~~~~p~~~~~~~~~~~~-~~~~~~~~~ 243 (414)
..+++|+++||+|+|+++++++++|+||..||.++.|+++|+|+.++. ....| ..++.|+.+|+ ++.|+++++
T Consensus 194 ~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~-~~~~~De~~r~~~~~e~l~~l 272 (452)
T PLN02287 194 ITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKP-IVISVDDGIRPNTTLADLAKL 272 (452)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccc-eeecccCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999999987753 11112 34789999998 999999999
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCc
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
+|+|+++|++|++|||+++|||+|+||++++.+++++.++++++.+++.....+..+..++..+++++|+++|++++|||
T Consensus 273 ~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID 352 (452)
T PLN02287 273 KPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDID 352 (452)
T ss_pred CCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCC
Confidence 99998789999999999999999999999999999998888899998765445555555778999999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC--CeeEEeecccccceeeEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGICNGGGGASALVL 401 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--~~~l~~~~~~gg~~~a~vl 401 (414)
++|+||+|+++.+.++|.||++++|+|++||++++|||+|+||++++.++++||+.+++ ++||+++|.+||++.++||
T Consensus 353 ~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~g~a~~i 432 (452)
T PLN02287 353 LFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVF 432 (452)
T ss_pred EEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccCceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999997777 8999999999999999999
Q ss_pred EEeccee
Q 015003 402 ELMQAVR 408 (414)
Q Consensus 402 ~~~~~~~ 408 (414)
|+.|.|+
T Consensus 433 e~~~~~~ 439 (452)
T PLN02287 433 ERGDSVD 439 (452)
T ss_pred EecCchh
Confidence 9999864
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-63 Score=498.44 Aligned_cols=385 Identities=54% Similarity=0.820 Sum_probs=335.9
Q ss_pred EEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE
Q 015003 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (414)
Q Consensus 16 ~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v 95 (414)
+|+|+++|||+|+.+..++.+..+|+.+|+++||+|+|++++|||.+++++..+++..+..+..++..+|+++++|++++
T Consensus 1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v 80 (386)
T cd00751 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV 80 (386)
T ss_pred CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence 59999999999988777789999999999999999999999999999999887766677788889999999744799999
Q ss_pred ccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 96 ~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
+++|+|++.+|..|+.+|++|.+|+|||+|+|+++..|............+... ...+...++..++....|++.|++|
T Consensus 81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~a~~~ 159 (386)
T cd00751 81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNT-LDGMLDDGLTDPFTGLSMGITAENV 159 (386)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccc-cccccccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999999987654322211111111000 0111123444555557799999999
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCCCccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 254 (414)
|++||+|+|+++++++++|+|+..|++++.+.+++.|++.+.+... ..+++++++++ +|.|+|++++|++++.|++|
T Consensus 160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~ 237 (386)
T cd00751 160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGP--VVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVT 237 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCC--eEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEe
Confidence 9999999999999999999999999999999999999876543111 34678899988 99999999999999778899
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhH
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~ 334 (414)
++|||+++|||+++||++++.+++++.+++++|.|++...+.+......+..+++++|+++|++++|||++++||+|++.
T Consensus 238 ~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~ 317 (386)
T cd00751 238 AGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQ 317 (386)
T ss_pred CCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHH
Confidence 99999999999999999999999999999899999999887666566677899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 335 AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 335 ~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.+.++|.||+++.|+|++||++++|||.|++|+.++.|+++||+++++++||++.|++||+++++|||+
T Consensus 318 ~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 318 ALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred HHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999985
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-63 Score=502.08 Aligned_cols=388 Identities=37% Similarity=0.500 Sum_probs=330.8
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
|+++|+|||+++|||+|+.+...+.++.+|+.+|+++||+|+|+++++||.+++|+..+....++++..++..+|++.++
T Consensus 1 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~ 80 (426)
T PRK08170 1 MARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKV 80 (426)
T ss_pred CCCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCc
Confidence 67899999999999999776666789999999999999999999999999999998875444467788899999996568
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhc------------cCCCCCCccccc-c-cc
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARK------------GSRLGHDTIVDG-M-LK 156 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~------------~~~~~~~~~~~~-~-~~ 156 (414)
|.++++.+|+|++.++..|+.+|++|.+|+|||+|+|+++..|+....... +..++....... + ..
T Consensus 81 p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (426)
T PRK08170 81 PAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAP 160 (426)
T ss_pred eeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccccc
Confidence 999999999999999999999999999999999999999886642211000 000000000000 0 00
Q ss_pred -----ccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCC
Q 015003 157 -----DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG 231 (414)
Q Consensus 157 -----~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~ 231 (414)
.++.+|+.+..|++.|++|+++||+|+|++++|++++|+||..+.+++.|+ +|+|++. +.++| +..||.
T Consensus 161 ~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~--~~~np---~a~de~ 234 (426)
T PRK08170 161 VIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFD--RDGKF---YDHDDG 234 (426)
T ss_pred ccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeec--CCCCe---eccCCC
Confidence 233444434589999999999999999999999999999999999999998 9999983 23367 889999
Q ss_pred ccc-cCHHHHhcCCCCcc-CCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHH
Q 015003 232 LEK-FDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIP 309 (414)
Q Consensus 232 ~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~ 309 (414)
+|+ +|.|+++++||+++ +.|++|++|||+++|||+|+||++++++++++.+|.++|.+++.....+..+..+++.+++
T Consensus 235 ~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~ 314 (426)
T PRK08170 235 VRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGPVHAAT 314 (426)
T ss_pred CCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccHHHHHH
Confidence 999 99999999999997 5588999999999999999999999999999999988999998877666666667889999
Q ss_pred HHHHHcCCCCCCCceeeccccchhHHHHHHH---HcCCCC--------------CCcCCCCCccccCCCccchHHHHHHH
Q 015003 310 KAIANAGLEASQIDYYEINEAFSVVAIANQK---LLGLDP--------------EQVNAHGGAVSLGHPLGCSGARILVT 372 (414)
Q Consensus 310 ~al~~aGl~~~DId~~~~hd~~~~~~~~~~e---~lGl~~--------------~~vn~~Gg~~~~Gh~~gasG~~~l~~ 372 (414)
++|+++|++++|||++|+||+|+.+.+.+++ .+||++ .|+|++||.+++|||+|+||++++.+
T Consensus 315 ~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~ 394 (426)
T PRK08170 315 PLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLH 394 (426)
T ss_pred HHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHH
Confidence 9999999999999999999999999996655 566544 49999999999999999999999999
Q ss_pred HHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 373 LLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 373 ~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+++||+...++++++++|++||++.++|||+.
T Consensus 395 l~~~l~~~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 395 LLHALKRRGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred HHHHHHhhCCCeEEEEEecCCChhheEEEEeC
Confidence 99999999999999999999999999999973
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-63 Score=494.87 Aligned_cols=378 Identities=41% Similarity=0.609 Sum_probs=333.5
Q ss_pred CceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~ 90 (414)
++|+|||+++|||+|+ .+.+.+.++.+|+.+|+++||+++|+.+++||.+++|+..++.. +++.+.+++..+|+++++
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 5799999999999996 67777889999999999999999998789999999998876543 577888899999997559
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++|+++|+|++.++..|+.+|++|.+|++||+|+|+++..|+.... +... ....+ ..|.+...|+.
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~~~----~~~~~--~~~~~~~~m~~ 149 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHV------VRPN----PRLVE--AAPEYYMGMGH 149 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccc------cCCC----ccccc--cccchhhhHHH
Confidence 999999999999999999999999999999999999999987641100 0000 00000 01111235799
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCC----CC----CCceeeecCCCccc-cCHHHHh
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG----RG----KPFIIVDKDEGLEK-FDAAKLM 241 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~----~~----~p~~~~~~~~~~~~-~~~~~~~ 241 (414)
.|++|+++||+|+|+++++++++|+||..||.++.|+++|+|+++++. .+ .. .+++.|+.+++ ++.|.+.
T Consensus 150 ~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~-~~~~~d~~~rp~~~~e~l~ 228 (391)
T PRK07661 150 TAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEET-ITFSQDEGVRADTTLEILG 228 (391)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccc-eeEecCCCCCCCCCHHHHh
Confidence 999999999999999999999999999999999999999999988652 11 12 45889999998 9999999
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCC
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
+++|+|..+|++|++|||+++|||+|+||++++.+++++.++.++|.|++.....+..+...+..+++++|+++|++++|
T Consensus 229 ~l~p~f~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~d 308 (391)
T PRK07661 229 KLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSD 308 (391)
T ss_pred cCCCCcCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHH
Confidence 99999877799999999999999999999999999999999989999999998777666667889999999999999999
Q ss_pred CceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 322 IDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 322 Id~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
||++|+||+|+.+.+..+|.||++++|+|++||++++|||.|+||++++.++++||+.+++++|++++|++||++.++|+
T Consensus 309 id~~ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~g~a~~~ 388 (391)
T PRK07661 309 IGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVF 388 (391)
T ss_pred CCEEEeCCHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhhEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred EE
Q 015003 402 EL 403 (414)
Q Consensus 402 ~~ 403 (414)
|+
T Consensus 389 e~ 390 (391)
T PRK07661 389 EL 390 (391)
T ss_pred Ee
Confidence 96
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-63 Score=493.29 Aligned_cols=393 Identities=84% Similarity=1.294 Sum_probs=338.8
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+......+++.+..++..+|++.+.|+
T Consensus 1 ~~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~ 80 (394)
T PLN02644 1 RDVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTIC 80 (394)
T ss_pred CcEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCce
Confidence 46999999999999987777789999999999999999999999999999999876544455666678899999766899
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
.+++.+|+|++.++.+|+++|++|++|+|||+|+|+++..|......+.+..++.....+......+++||....|+..|
T Consensus 81 ~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 160 (394)
T PLN02644 81 TTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCA 160 (394)
T ss_pred EEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHH
Confidence 99999999999999999999999999999999999999766422111111111111111111113344566556799999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccC-CC
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE-GG 251 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 251 (414)
++|+++||+|+|+++++++++|+|+..|++++.|+++|+|+++.+..++|+..++.|+.++..+.+.+...+|+|.+ +|
T Consensus 161 ~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g 240 (394)
T PLN02644 161 ELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGG 240 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCC
Confidence 99999999999999999999999999999999999999999877655666445788899877889999999999966 58
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
.+|++|||+++||++++||++++.+++++.+++++|.|++...+.+......+..+++++|+++|++++|||++|+||+|
T Consensus 241 ~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f 320 (394)
T PLN02644 241 SVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDYYEINEAF 320 (394)
T ss_pred cEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHH
Confidence 99999999999999999999999999999899899999998876554455567789999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEec
Q 015003 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
+.+.+.++|.||++++|+|++||++++|||.|+||+++++++++||+++++++++.+.|++||++.++|||+.+
T Consensus 321 ~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~~~g~~~~~~~gg~g~a~~~e~~~ 394 (394)
T PLN02644 321 SVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGICNGGGGASAIVVELMQ 394 (394)
T ss_pred HHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCceeEEEEEecC
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999863
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-63 Score=492.66 Aligned_cols=377 Identities=39% Similarity=0.580 Sum_probs=333.0
Q ss_pred CceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCC
Q 015003 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~ 89 (414)
++|+|||+++|||+|+ .+++.++.+.+|+.+++++||++ +|+++++||.+++|+..+... +++++.+++..+|++.+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 6899999999999995 67888999999999999999995 899999999999998775443 46788889999999856
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchH
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMG 169 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (414)
+|+++|+++|+|++.++..|+.+|++|++|++||+|+|++|..|..... .+ .+...+.+ ...+..|+
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~-----~~------~~~~~~~~--~~~~~~~~ 148 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGV-----DF------HPGLSKNV--AKAAGMMG 148 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCcccccc-----Cc------chhhhhhc--cccchHHH
Confidence 9999999999999999999999999999999999999999986642100 00 00001111 11235799
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCcc
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFK 248 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~ 248 (414)
+.|++|+++||+|+|++++|++++|+||..|+.++.|..||+|+.++.+.+.+ ..+++|+++|+ +|.|+++++||+++
T Consensus 149 ~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~ 227 (387)
T PRK08947 149 LTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVL-KLFDYDEVIRPETTVEALAALRPAFD 227 (387)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCc-eeecCCCCCcCCCCHHHHhcCCceee
Confidence 99999999999999999999999999999999999999999999987765555 45789999998 99999999999998
Q ss_pred C-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeec
Q 015003 249 E-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEI 327 (414)
Q Consensus 249 ~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~ 327 (414)
+ +|.+|++|||+++|||+|+||++++.+++++.+++++|.+++....++..+...+..+++++|+++|++++|||++|+
T Consensus 228 p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El 307 (387)
T PRK08947 228 PVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFEL 307 (387)
T ss_pred CCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 5 567999999999999999999999999999988889999999886555555556789999999999999999999999
Q ss_pred cccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 328 NEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 328 hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
||+|+++.+.++|.||+++ +|+|++||++++|||.|+||++++.++++||+++++++++++.|+|||++.++|||+
T Consensus 308 ~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 308 NEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred cccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEEEeecccceeEEEEEe
Confidence 9999999999999999987 599999999999999999999999999999998888899999999999999999986
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-63 Score=496.82 Aligned_cols=389 Identities=30% Similarity=0.466 Sum_probs=332.2
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
.++|||||+++|||+|+.+.+.+.++.+|+.+++++||+|+|+++++||.+++|+..+...+++++..++...|++.++|
T Consensus 6 ~~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p 85 (430)
T TIGR02446 6 GERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD 85 (430)
T ss_pred CCCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCc
Confidence 46899999999999998888888999999999999999999999999999999998765555778888888899986799
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhcc--------CCCCC-C---cc--ccc-ccc
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG--------SRLGH-D---TI--VDG-MLK 156 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~--------~~~~~-~---~~--~~~-~~~ 156 (414)
+++|+++|+||+.|+..|+.+|++|.+|++||+|+|+||..|+.......+ ..++. . .. +.. +..
T Consensus 86 ~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (430)
T TIGR02446 86 AYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPV 165 (430)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhccc
Confidence 999999999999999999999999999999999999999877532210000 00000 0 00 000 000
Q ss_pred cccccccc-CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-
Q 015003 157 DGLWDVYN-DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK- 234 (414)
Q Consensus 157 ~~~~~~~~-~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~- 234 (414)
...++.+. ...|+..|++|+++||+|+|+++++++++|+++..+++++.|.++|+|+...++. ..+++|+.+|+
T Consensus 166 ~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a----~~~~~D~~~r~~ 241 (430)
T TIGR02446 166 PPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYK----QWIAEDNNIRHN 241 (430)
T ss_pred CcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCc----eEecccCCCCCC
Confidence 11111111 3469999999999999999999999999999999999999999999998643322 13789999998
Q ss_pred cCHHHHhcCCCCccC-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-CccccchHHHHHHHH
Q 015003 235 FDAAKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-EWFTTAPSLAIPKAI 312 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~a~~~al 312 (414)
+|.|+|++++|++++ .|++|++|||+++|||+|+||++++.+++++.++.++|.+++....++ ..+...+..+++++|
T Consensus 242 ~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~a~~~al 321 (430)
T TIGR02446 242 STLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSYATPLAL 321 (430)
T ss_pred CCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHHHHHHHH
Confidence 999999999999975 489999999999999999999999999999988888999998776554 245566788999999
Q ss_pred HHcCCCCCCCceeeccccchhHHHHHHHHcC-----------------CCCCCcCCCCCccccCCCccchHHHHHHHHHH
Q 015003 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLG-----------------LDPEQVNAHGGAVSLGHPLGCSGARILVTLLG 375 (414)
Q Consensus 313 ~~aGl~~~DId~~~~hd~~~~~~~~~~e~lG-----------------l~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (414)
+++|++++|||++|+||+|+++++.++|.|| ++.+|+|++||.+++|||+|+||++++.|+++
T Consensus 322 ~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 322 QRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHH
Confidence 9999999999999999999999999999997 56669999999999999999999999999999
Q ss_pred HHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 376 VLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 376 ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
||+++++++++...|++||++.++++|++
T Consensus 402 qL~g~ag~~g~~~~~~~GG~g~a~iie~~ 430 (430)
T TIGR02446 402 ELKRRGGGLGLNTACAAGGLGAAMILEVE 430 (430)
T ss_pred HHhhcCCCccEEEEEecCcceEEEEEEeC
Confidence 99999999999999999999999999974
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-64 Score=463.20 Aligned_cols=392 Identities=64% Similarity=0.940 Sum_probs=375.3
Q ss_pred ccCCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCC
Q 015003 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN 88 (414)
Q Consensus 9 ~~~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~ 88 (414)
+.++++|+||+..+||++-++++++.+++.+|..-|++.||+++.+++++++-+|+|+..+...+++++++.+...|||.
T Consensus 2 ~~~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~ 81 (396)
T KOG1390|consen 2 SLSSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPY 81 (396)
T ss_pred CCCCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCc
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
++++.+++..|+|++.|+.+|++.|+.|.+|+|+++|.|.||++| .+.-.|.+.+||.....|.+.+||+||.|....|
T Consensus 82 sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP-~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~M 160 (396)
T KOG1390|consen 82 SVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP-YLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHM 160 (396)
T ss_pred ceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCc-chhhhccCcCcCCeeeeechhhcchHHHhccCCc
Confidence 999999999999999999999999999999999999999999999 3333467889999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
+..|+...++|++|||+.|.|++.|++++..++.++.|.+||+|++++.+++. ..+++||.+++ .+.+.+...+++|
T Consensus 161 G~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~--~~v~~DEe~~k~~~~~~~~~l~~vF 238 (396)
T KOG1390|consen 161 GICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGE--TVVKKDEEPKKGSNIEKLSKLRPVF 238 (396)
T ss_pred chhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCc--EEeccchhhhcccchhhhcccccee
Confidence 99999999999999999999999999999999999999999999999999885 46899999999 9999999999998
Q ss_pred c-CCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceee
Q 015003 248 K-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (414)
Q Consensus 248 ~-~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~ 326 (414)
- .+|++|..+.+.+.|||+|+||++.+.+.+.+.+|+++|.+|+.+...|.+|..+|..++.++|+++||..+|||+||
T Consensus 239 ~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdVd~~E 318 (396)
T KOG1390|consen 239 KEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDVDYWE 318 (396)
T ss_pred ecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhhhHHh
Confidence 4 458899999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 327 INEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 327 ~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
++++|+...+...+.||++|+++|+.||..++|||+|+||++.+..+++.|+.+++++|++..|+|||..+++++++
T Consensus 319 iNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g~~GvAaiCnGGGgasa~viek 395 (396)
T KOG1390|consen 319 INEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGGKIGVAAICNGGGGASAMVIEK 395 (396)
T ss_pred hhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCCceeEEEEecCCCceeeEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=490.37 Aligned_cols=384 Identities=51% Similarity=0.750 Sum_probs=330.7
Q ss_pred EEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc
Q 015003 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN 96 (414)
Q Consensus 17 ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~ 96 (414)
|||+++|||+|+.+++.+.+..+|+.+|+++||+|+|++++|||.+++++.+++...+..+..++..+|++..+|+++++
T Consensus 1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~ 80 (386)
T TIGR01930 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN 80 (386)
T ss_pred CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence 78999999999877788899999999999999999999999999999998876665577778899999997458999999
Q ss_pred cCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhh-hccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEA-RKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 97 ~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
++|+|++.+|..|+++|++|.+|+|||+|+|+++..+...... +....++.....+.+...++.+|+....|++.+++|
T Consensus 81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y 160 (386)
T TIGR01930 81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENL 160 (386)
T ss_pred chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHH
Confidence 9999999999999999999999999999999988755322110 001011110000111233455555556799999999
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCCCccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 254 (414)
|++||+|+|+++++++++|+||..|++.+.++++++|....++ +.+ .++.+|+++++ +|.|+|++++|++++.|.+|
T Consensus 161 ~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~-~~~-~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~ 238 (386)
T TIGR01930 161 AKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGR-KGP-VTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVT 238 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccC-CCC-eEeCCCCCCCCCCCHHHHhCCCCCcCCCCeee
Confidence 9999999999999999999999999999999999999765432 222 45677888888 99999999999998555599
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhH
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~ 334 (414)
++|||+++|||+|+||++++.+++++.+|+++|.|++.+...+.........+++++|+++|++++|||++++||+|++.
T Consensus 239 ~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~ 318 (386)
T TIGR01930 239 AGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQ 318 (386)
T ss_pred CCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHH
Confidence 99999999999999999999999999998899999999876555555567899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 335 AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 335 ~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
.+..+|.||+...|+|++||++++|||+|++|+.+++|+++||++++++++|++.+++||.+.++|||
T Consensus 319 ~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 319 VLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred HHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceEEEEeC
Confidence 99999999998889999999999999999999999999999999998899999999999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-62 Score=488.29 Aligned_cols=376 Identities=39% Similarity=0.556 Sum_probs=329.5
Q ss_pred ceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCc
Q 015003 14 DVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~ 90 (414)
+|||||+++|||+|+ .+++.+.++.+|+.+|++++|++ +|++|++||.+++|+...... +++++.+++...|++..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 489999999999984 67888999999999999999995 699999999999998864343 466888888889998779
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++|+++|+|++.|+..|+++|++|++|++|++|+|+|+..|..... .+ .+...+.+. ..+..|++
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~-----~~------~~~~~~~~~--~~~~~~~~ 147 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGV-----DF------HPGMSLHVA--KAAGMMGL 147 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCC-----Cc------chhHHhhhc--cccchHHH
Confidence 999999999999999999999999999999999999999987642100 00 000001011 11357999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
.|++|+++||+|+|++++|++++|+|+..+++++.|..||+|++++...+.+ ..+++|+++|+ +|.|+++++||++++
T Consensus 148 ~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~-~~~~~da~~r~~~t~e~~~~~~~v~~p 226 (385)
T TIGR02445 148 TAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFL-KQFDYDEVIRPETTVESLAALRPAFDP 226 (385)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCc-eeeCCCCCCCCCCCHHHHhcCCceecC
Confidence 9999999999999999999999999999999999999999999887654444 45889999998 999999999999986
Q ss_pred -CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeecc
Q 015003 250 -GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (414)
Q Consensus 250 -~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~h 328 (414)
+|.+|++|||+++|||+|+||++++.+++++.+++++|.+++....++..+...+..+++++|+++|++++|||++|+|
T Consensus 227 ~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~ 306 (385)
T TIGR02445 227 KNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELN 306 (385)
T ss_pred CCCceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEc
Confidence 6779999999999999999999999999999899899999998765555555577899999999999999999999999
Q ss_pred ccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 329 EAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 329 d~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|+|+++.+.++|.|||++ .|+|++||.+++|||.|+||++++.++++.|+.+++++|+++.|+|||++.++++|+
T Consensus 307 daFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 307 EAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred cccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCeEEEEEecccChhheEEEEe
Confidence 999999999999999976 699999999999999999999999999966665667899999999999999999997
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-62 Score=484.09 Aligned_cols=379 Identities=36% Similarity=0.571 Sum_probs=334.6
Q ss_pred CceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~ 90 (414)
++|||+|+++|||+++ .+++++.++.+|+.+|+++||+++|++|++||.+++|+..++.. +++.+..++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 6899999999999985 56678899999999999999999999999999999999987764 356899999999998669
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++|+++|+|++.||..|+.+|++|++|++||+|+|+||..|..... ..+.. ....+...+.| ..++.
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~----~~~~~-----~~~~~~~~~~~--~~m~~ 150 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNR----HMLRE-----GWLVEHKPEIY--WSMLQ 150 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCC----cCccc-----hhhhccCCccc--cCHHH
Confidence 999999999999999999999999999999999999999987642210 01100 00001000111 35678
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCc--------eeeecCCCccc-cCHHHHh
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPF--------IIVDKDEGLEK-FDAAKLM 241 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~--------~~~~~~~~~~~-~~~~~~~ 241 (414)
.++.+..+|+++|+++++|+..+|.+|..+.+++.|.+||+|+..++...+|| .++++||.+|+ +|.|+++
T Consensus 151 ~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~ 230 (392)
T PRK07108 151 TAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVS 230 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHh
Confidence 88889999999999999999999999999999999999999998764332231 45889999998 9999999
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCC
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
+++|+| .+|++|++|||+++|||+|+||++++.+++++.+++++|.|++.....+..+..++..+++++|+++|++++|
T Consensus 231 ~l~~~~-~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~D 309 (392)
T PRK07108 231 KIRSAL-PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDD 309 (392)
T ss_pred cCCCCC-CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHH
Confidence 999998 5799999999999999999999999999999999989999999988777766678899999999999999999
Q ss_pred CceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 322 IDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 322 Id~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
||++|+||+|+++.+..+|.||++++|+|++||++++|||.|+||++.+..++.+|+.+++++|+++.|++||++.+++|
T Consensus 310 id~~ei~eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~~~~~g~~~~c~~gg~g~a~~i 389 (392)
T PRK07108 310 IDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGAKYVVVTMCIGGGQGAAGLF 389 (392)
T ss_pred cCchHhhhHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhhCCCEEEEEEccccChhhEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred EE
Q 015003 402 EL 403 (414)
Q Consensus 402 ~~ 403 (414)
|+
T Consensus 390 e~ 391 (392)
T PRK07108 390 EV 391 (392)
T ss_pred Ee
Confidence 96
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-61 Score=477.06 Aligned_cols=383 Identities=32% Similarity=0.483 Sum_probs=343.8
Q ss_pred CceEEEeeecCccc--c-CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCC
Q 015003 13 RDVCIVGVARTPMG--G-FLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (414)
Q Consensus 13 ~~v~ivG~~~t~~~--~-~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~ 88 (414)
++|+||+..+|||+ | ..+++.+.++.+|+..+++.+|+++|++|++||.|++|+..+... +++++.++++..|++.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 57999999999998 8 489999999999999999999999999999999999999987664 6899999999999998
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhh-hhhccCCCCCCccccccccccccccccCCc
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA-EARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
++|+++|+..|+|++.++..|+.+|++|++|++|++|+|.||..|+... ..+.+. .....+.. .++++++|....
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~ 157 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGK---PPLGMGSG-NLRLRALHPQSH 157 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCC---Cccccccc-CcccccccCCCC
Confidence 9999999999999999999999999999999999999999999997322 111110 11111111 245556555668
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (414)
|+..|+.+.++||+|||++|+|++.||++|..++.++.|.+||+|++.+ .+. ..+++||.+|+ +|.|.+.+.||+
T Consensus 158 Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~--~~~--~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 158 QGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRD--DGS--VALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcC--CCC--EEecCCCCCCCCCCHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999999999722 122 35899999998 999999999999
Q ss_pred cc--------CCCc------------------cccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc
Q 015003 247 FK--------EGGS------------------VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF 300 (414)
Q Consensus 247 ~~--------~~g~------------------~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~ 300 (414)
|. ++|. +|+.++|+++|||+|+||++++.+++++.+++++|.+++...+++..+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~ 313 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM 313 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence 96 3687 899999999999999999999999999998999999999988777766
Q ss_pred ccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 301 TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 301 ~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
...+..+++++|+++|++++|||++++||+|+.+.+.+++.+|++.+|+|++||++++|||+|+||++++.++++||+.+
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCeeEEeecccccceeeEEEEE
Q 015003 381 KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 ~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+.++|++++|++||++.+++||+
T Consensus 394 g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred CCCeEEEEEEeeccceeEEEEEe
Confidence 88889999999999999999997
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-61 Score=483.06 Aligned_cols=381 Identities=29% Similarity=0.435 Sum_probs=319.4
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|||||+++|||+++.+.+.+.++.+|+.+|++++|+++|+++++||.+++|+..+...+++.+..++...|++..+|+
T Consensus 7 ~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~ 86 (427)
T PRK09268 7 RRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPA 86 (427)
T ss_pred CCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCce
Confidence 68999999999999987888889999999999999999999999999999999887644456778887788777656899
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhh-hh-------ccCCCCCCc----ccccccc----
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-AR-------KGSRLGHDT----IVDGMLK---- 156 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~-~~-------~~~~~~~~~----~~~~~~~---- 156 (414)
++|+++|+|++.++..|+.+|++|.+|++||+|+|++|..|+.... .+ ....++... ..++...
T Consensus 87 ~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (427)
T PRK09268 87 YDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEI 166 (427)
T ss_pred eeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccC
Confidence 9999999999999999999999999999999999999987754321 00 000011000 0001000
Q ss_pred ccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-c
Q 015003 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-F 235 (414)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~ 235 (414)
...++++....|+..+++|+++||+|+|++++|++++|+||..++..+.|.++|.|.+ .+++|+++|+ +
T Consensus 167 ~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~----------~~~~D~~~r~~~ 236 (427)
T PRK09268 167 PRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL----------GLTRDNNLRPDS 236 (427)
T ss_pred ccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc----------CcccCCCCCCCC
Confidence 1222333345699999999999999999999999999999999999999999998852 1678899998 9
Q ss_pred CHHHHhcCCCCccC--CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEE-EEEEEeecC---CCccccchHHHHH
Q 015003 236 DAAKLMKLRPSFKE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKI-RGFADAAQA---PEWFTTAPSLAIP 309 (414)
Q Consensus 236 ~~~~~~~~~~~~~~--~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i-~g~~~~~~~---~~~~~~~~~~a~~ 309 (414)
|.|+++++||+|++ +|++|++|||+++|||+|+||++++++++++.+|..+| .+.....+. +..+...+..+++
T Consensus 237 t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~ 316 (427)
T PRK09268 237 SLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMAPAYAVP 316 (427)
T ss_pred CHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhccHHHHHH
Confidence 99999999999986 67899999999999999999999999999998886566 333333321 1234457788999
Q ss_pred HHHHHcCCCCCCCceeeccccchhHHHHHH---HHcCCCC--------------CCcCCCCCccccCCCccchHHHHHHH
Q 015003 310 KAIANAGLEASQIDYYEINEAFSVVAIANQ---KLLGLDP--------------EQVNAHGGAVSLGHPLGCSGARILVT 372 (414)
Q Consensus 310 ~al~~aGl~~~DId~~~~hd~~~~~~~~~~---e~lGl~~--------------~~vn~~Gg~~~~Gh~~gasG~~~l~~ 372 (414)
++|+++|++++|||++|+||+|+++.+..+ |.|||++ .|+|++||.+++|||.|+||++++.|
T Consensus 317 ~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e 396 (427)
T PRK09268 317 RLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVAT 396 (427)
T ss_pred HHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHH
Confidence 999999999999999999999999966655 8888873 48999999999999999999999999
Q ss_pred HHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 373 LLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 373 ~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+++||++++++++|+++|++||++.++|||+
T Consensus 397 ~~~QL~~~~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 397 LAKLLAEKGSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHhcCCCEEEEEEcccCchheEEEEeC
Confidence 9999999999999999999999999999985
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-60 Score=474.85 Aligned_cols=377 Identities=37% Similarity=0.570 Sum_probs=314.7
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~~~~ 91 (414)
++|+|||+++|||+|+.+.+++.+..+|+.+|+++||+|+|+++++||.+++|+..... ..++.+.......|++...|
T Consensus 2 ~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p 81 (382)
T PRK07801 2 AEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVP 81 (382)
T ss_pred CceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCc
Confidence 68999999999999987777778999999999999999999999999999998763222 22445665556677754589
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc--CCchH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN--DFGMG 169 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 169 (414)
.++++++|+|++.++..|+++|++|++|+|||+|+|+++..|+... .+...+++...... ....+.+|+. +..+.
T Consensus 82 ~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~ 158 (382)
T PRK07801 82 GVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSA-MTAGEQLGFTSPFA--ESKGWLHRYGDQEVSQF 158 (382)
T ss_pred eeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCccccc-ccccccccCCcccc--cCcchhhhccCCCCCHH
Confidence 9999999999999999999999999999999999999987653110 00010111000000 0011223333 22333
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccC
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (414)
..|++|+++||+|+|+++++++++|+|+..||+++.|.++++|++ .++.|+.++++|.|+|+++||+++
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~----------~~~~d~~~~~~t~e~~~~~~~i~~- 227 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVG----------GVTVDEGPRETSLEKMAGLKPLVE- 227 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccc----------CccccCCcCcCCHHHHhcCCCCCC-
Confidence 469999999999999999999999999999999988888776653 267889988999999999999984
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
.||+|++|||+++|||+|+||++++.+++++.++.++|.+++...+.+......+..+++++|+++|++++|||++|+||
T Consensus 228 ~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~~e~~d 307 (382)
T PRK07801 228 GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDVVEINE 307 (382)
T ss_pred CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCEeeecc
Confidence 47999999999999999999999999999998888999998776544333455667899999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+++.+.++|.|||+++|+|++||++++|||.|+||++++.|+++||++++.++++.+.+++||++.++|||+
T Consensus 308 ~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 308 AFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred cchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEcccccceeEEEEEe
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999986
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-59 Score=470.91 Aligned_cols=384 Identities=34% Similarity=0.523 Sum_probs=327.3
Q ss_pred CceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCCC
Q 015003 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNS 89 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dA-gi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~~ 89 (414)
++|+|||+++|||+|+ .+.+++.++.+|+.+|+++||+|+ |++++|||.+++|+..+.. .+++.+..++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 5799999999999985 567778999999999999999997 9999999999998765432 3466778899999996 5
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcc-------------cccccc
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTI-------------VDGMLK 156 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~-------------~~~~~~ 156 (414)
.|+++++.+|+|+..++..|+.+|++|.+|+|||+|+|+++..|..... +.+. ++.... .++.+.
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSD-SLPD-TKNPLFAEAQARTAARAEGGAEAWH 158 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccc-cccc-cCchhhhhccccccccccccccccc
Confidence 8999999999999999999999999999999999999999875521111 0000 000000 000111
Q ss_pred cccc---ccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCcc
Q 015003 157 DGLW---DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE 233 (414)
Q Consensus 157 ~~~~---~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~ 233 (414)
..+. .|.....++..+++|+++||++++++++|++++|.++..+.++..+..+++|+.+++. ..+++|++++
T Consensus 159 ~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~-----~~~~~d~~~r 233 (406)
T PRK07851 159 DPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDG-----TVVSTDDGPR 233 (406)
T ss_pred ccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCC-----ceeCCCCCcc
Confidence 1110 1112345688999999999999999999999999999999998888888888776653 2477888888
Q ss_pred c-cCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHH
Q 015003 234 K-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAI 312 (414)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al 312 (414)
+ +|.|++++++|+++++|.+|++|||+++|||+|+||++++.+++++.+++++|.|++.....+......+..+++++|
T Consensus 234 ~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al 313 (406)
T PRK07851 234 AGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQAL 313 (406)
T ss_pred CCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHHHH
Confidence 8 999999999999986677999999999999999999999999999999989999999887665545556789999999
Q ss_pred HHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccc
Q 015003 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (414)
Q Consensus 313 ~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~ 392 (414)
+++|++++|||++|+||+|+++.+..+|.||++++|+|++||++++|||+|++|++++.++++||+.+++++||.+.|++
T Consensus 314 ~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~ 393 (406)
T PRK07851 314 ARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVG 393 (406)
T ss_pred HHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred ccceeeEEEEEe
Q 015003 393 GGGASALVLELM 404 (414)
Q Consensus 393 gg~~~a~vl~~~ 404 (414)
||++.++|||+.
T Consensus 394 gg~g~a~~~e~~ 405 (406)
T PRK07851 394 GGQGMAMVLERL 405 (406)
T ss_pred cChhhEEEEEec
Confidence 999999999975
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-58 Score=450.72 Aligned_cols=357 Identities=34% Similarity=0.515 Sum_probs=317.7
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCccee
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~ 93 (414)
+|+|+|+++|||+|+.+.+.+.++.+|+..|++++++ |++ ++||.+++|+..+. +++.+..++..+|++.++|++
T Consensus 2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~ 76 (361)
T PRK06690 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV 76 (361)
T ss_pred cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence 5999999999999998888899999999999999844 896 89999999988654 366676788999998679999
Q ss_pred eEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHH
Q 015003 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (414)
Q Consensus 94 ~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (414)
+|+++|+|++.++..|+.+|++|++|++||+|+|+||..|+.. +. .++. + .+....|++.|+
T Consensus 77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~-~~----~~~~---------~----~~~~~~~~~~a~ 138 (361)
T PRK06690 77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQN-RA----RFSP---------E----TIGDPDMGVAAE 138 (361)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCccc-cc----ccCc---------c----cccCccHHHHHH
Confidence 9999999999999999999999999999999999999876421 10 0100 0 011123999999
Q ss_pred HHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhc-CCCCccCCC
Q 015003 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMK-LRPSFKEGG 251 (414)
Q Consensus 174 ~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~g 251 (414)
+|+++||+|+|++++|+..+|+|+..+.+++.|+++|+|++. ++ |+.+++ ++.|+++. .+|+++++|
T Consensus 139 ~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~----------~~-d~~~r~~~~~e~ll~~l~p~~~~~g 207 (361)
T PRK06690 139 YVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNG----------LL-DESIKKEMNYERIIKRTKPAFLHNG 207 (361)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecccC----------cc-ccccCCCCCHHHHhhcCCCcccCCC
Confidence 999999999999999999999999999999999999888541 45 788888 99999955 599998789
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
++|++|||+++|||+|+||++++.+++++.+|.++|.+++.....+..+...+..+++++|+++|++++|||++++||+|
T Consensus 208 ~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eaf 287 (361)
T PRK06690 208 TVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAF 287 (361)
T ss_pred ceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchh
Confidence 99999999999999999999999999999888789999887766666566678899999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 332 SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+++.+.++|.||++++|+|++||++++|||.|+||.+++.+++.||+.+++++|+++.|++||++.++|+|+.
T Consensus 288 a~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~~~g~~~~c~~gG~g~a~~~e~~ 360 (361)
T PRK06690 288 ASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDMKYGIATLGIGGGIGLALLFEKV 360 (361)
T ss_pred HHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCCCEEEEEEcccCcceeEEEEEec
Confidence 9999999999999999999999999999999999999999999999988889999999999999999999985
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=394.32 Aligned_cols=390 Identities=39% Similarity=0.594 Sum_probs=372.1
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~~~~ 91 (414)
+-|+||+.-+|+|+.+.+.+.+++..||..-|++.||+.+++.++.+|.+|+|+...+. .+...++.+..+.|+|.+.|
T Consensus 4 kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p 83 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP 83 (396)
T ss_pred ceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC
Confidence 46999999999999999999999999999999999999999999999999999988654 45667888999999998999
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
..+++.-|.|+.+++..+++.|.-|.+++||++|.|.||.+|+...+.|++..+|....++...+.++.|+|....|++.
T Consensus 84 ALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~T 163 (396)
T KOG1391|consen 84 ALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMT 163 (396)
T ss_pred ceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhh
Confidence 99999999999999999999999999999999999999999999999999999998888877778889999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (414)
|+.+..+|.++||+.++|++++..+=..+..++.|..||+|.+++.+.++- .|.-||..|+ +|+|++.+.+|+|.++
T Consensus 164 AEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~--~f~vDEHpRp~TT~E~L~KLppvFkKd 241 (396)
T KOG1391|consen 164 AENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQ--TFQVDEHPRPQTTLEQLQKLPPVFKKD 241 (396)
T ss_pred HHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCce--eeEecCCCCccchHHHHhhCCchhccC
Confidence 999999999999999999999999999999999999999999999887764 6889999998 9999999999999999
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
|.+|+.+.+-++|||+|+|+.+++..+++..+|+++|.++.....+|..++.+|.++++.+|+++|+..+|||++|++++
T Consensus 242 G~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNEA 321 (396)
T KOG1391|consen 242 GTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNEA 321 (396)
T ss_pred CeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceEEechh
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
|..+.+.+.+.|+++.+++|++||.+.+|||+|+||.+....+++.|+-+++++++-.+|.|||++.++++|..
T Consensus 322 FApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~~KYgiGSACIGGGQGIA~l~e~~ 395 (396)
T KOG1391|consen 322 FAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRGGKYGIGSACIGGGQGIAVLIEST 395 (396)
T ss_pred hchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcCCccccccccccCCceEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999874
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-55 Score=435.27 Aligned_cols=331 Identities=24% Similarity=0.332 Sum_probs=276.9
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
|+|+|||+++|||+|+. +.+..+|+.+|+++||+|+||++++||.+++|+..+......++..++..+|++. .+.
T Consensus 1 ~~v~IvG~g~t~~~~~~----~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~-~~~ 75 (385)
T PRK12578 1 RRVAVIGVGNSKFGRRD----DVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTG-KVP 75 (385)
T ss_pred CceEEEeecccceeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCC-CCe
Confidence 57999999999999975 4789999999999999999999999999999987764444566788999999974 677
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc---CCchH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN---DFGMG 169 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 169 (414)
++++++|+|++.+|..|+.+|++|.+|+|||+|+|+++..+...... ...... +..... .|+. +..++
T Consensus 76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~-~~~~~~-----~~~~~~---~~~g~~~~~~~a 146 (385)
T PRK12578 76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLA-IGGRGG-----NYQWEY---HFYGTTFPTYYA 146 (385)
T ss_pred eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhh-hccccc-----cccccc---ccCCCChHHHHH
Confidence 99999999999999999999999999999999999998754311100 000000 000000 1222 34678
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccC
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKE 249 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (414)
+.+++||.+||+|+|+++++++++|++|..||.+ .|+++ ++.|+|+++|++++
T Consensus 147 ~~a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a-~~~~~-------------------------i~~e~v~~s~~i~~- 199 (385)
T PRK12578 147 LYATRHMAVYGTTEEQMALVSVKAHKYGAMNPKA-HFQKP-------------------------VTVEEVLKSRAISW- 199 (385)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHhcCChh-hcCCC-------------------------CCHHHHhcCCccCC-
Confidence 8999999999999999999999999999999853 33322 77899999999987
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC------Ccccc-chHHHHHHHHHHcCCCCCCC
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTT-APSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~-~~~~a~~~al~~aGl~~~DI 322 (414)
|+|++|||+++|||+|+||++++.+++++.++.++|.|++..++.. +.... .+..+++++|+++|++++||
T Consensus 200 --Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Di 277 (385)
T PRK12578 200 --PIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDI 277 (385)
T ss_pred --CccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHC
Confidence 9999999999999999999999999999866669999999875421 11121 45689999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCe
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~ 384 (414)
|++++||+|+++++..+|.|||+++ |+|++||.+++|||+|+||++++.|+++|||++++.+
T Consensus 278 D~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag~~ 357 (385)
T PRK12578 278 EVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGKL 357 (385)
T ss_pred CEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcccC
Confidence 9999999999999999999999984 8999999999999999999999999999999987665
Q ss_pred eE
Q 015003 385 GV 386 (414)
Q Consensus 385 ~l 386 (414)
|+
T Consensus 358 qv 359 (385)
T PRK12578 358 QQ 359 (385)
T ss_pred cC
Confidence 53
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-54 Score=430.40 Aligned_cols=330 Identities=19% Similarity=0.176 Sum_probs=273.9
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCC
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNS 89 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~ 89 (414)
+.++|+|||+++|||+++.+ .+..+|+.+|+++||+|+|++++|||.+++++....+. .+..+..++..+|+. .
T Consensus 7 ~~~~vaIvG~g~t~~~~~~~----~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~ 81 (392)
T PRK06065 7 LNKRVAVIGAGLTLFRRRLL----ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-R 81 (392)
T ss_pred ccCceEEEEecccCCcCCCC----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-C
Confidence 34689999999999999864 78999999999999999999999999999986422222 244677788999986 4
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc---CC
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN---DF 166 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 166 (414)
.++++++++|+|+..+|..|+++|++|.+|+|||+++|+++......... +.. ..+++ +..|+. +.
T Consensus 82 ~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~-----~~~--~~~~~----~~~p~g~~~~~ 150 (392)
T PRK06065 82 KPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAV-----FRY--IWDPI----LEKPLNPNLIW 150 (392)
T ss_pred CCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHH-----Hhh--hccch----hccCCCccHHH
Confidence 89999999999999999999999999999999999999976421100000 000 00111 112333 34
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
.|++.|++||++||+|+|+|+.+++++|+||..||++.. + +++|.|+|+++||+
T Consensus 151 ~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP~A~~-r-------------------------~~lt~e~vl~s~~i 204 (392)
T PRK06065 151 IFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNPYAQL-G-------------------------SKITVEDVLKSEVL 204 (392)
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCchhhh-c-------------------------CCCCHHHHhcCCcc
Confidence 599999999999999999999999999999999998521 1 12899999999999
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC------CccccchHHHHHHHHHHcCCCC-
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEA- 319 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~aGl~~- 319 (414)
++ |+|++|||+++|||+|+||+|++.+++++.++ ++|.+++..++.. ......+..+++++|+++|+++
T Consensus 205 a~---Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p 280 (392)
T PRK06065 205 VW---PVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERP 280 (392)
T ss_pred cC---CCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCc
Confidence 88 99999999999999999999999999998777 7899998875421 1112234689999999999985
Q ss_pred -CCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 320 -SQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 320 -~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
+|||++|+||+|+++++..+|.|||+++ |+|++||++++|||.|++|+.++.|+++|||++
T Consensus 281 ~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 360 (392)
T PRK06065 281 RKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGT 360 (392)
T ss_pred hhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999985 999999999999999999999999999999998
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
++.||+
T Consensus 361 ag~rQv 366 (392)
T PRK06065 361 AGKMQV 366 (392)
T ss_pred ccCCcC
Confidence 776654
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-54 Score=432.93 Aligned_cols=339 Identities=19% Similarity=0.152 Sum_probs=279.1
Q ss_pred CCCCCCcccc---CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHH
Q 015003 1 MVPLEPSESI---KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPA 77 (414)
Q Consensus 1 ~~~~~~~~~~---~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a 77 (414)
|.+.||++++ |+++|+|||+++|||+|+.. +.+..+|+.+|+++||+|+|++++|||.++++.....+.+++.+
T Consensus 1 ~~~~~~~~~~~~~~m~~VaIvG~g~Tpfgr~~~---~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~ 77 (430)
T PRK06365 1 MITFSDRQLKMKKKSRDVYMVAAGVTKFDKASP---YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLA 77 (430)
T ss_pred CcccCcccchhhhhccCEEEEEeeecCccccCC---CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchh
Confidence 6778999985 46789999999999998532 46789999999999999999999999998887655444455555
Q ss_pred HH-HHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccc
Q 015003 78 RQ-AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK 156 (414)
Q Consensus 78 ~~-va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
.. ++..+|+++ .|+.+++.+|+|+..++..|+.+|++|.+|+|||+|+|+++..++..... .... ..+..
T Consensus 78 ~~~~~~~lGl~~-~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~----~~~~--~~d~~-- 148 (430)
T PRK06365 78 GIMVQDYLGLVP-KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNE----FIAL--ASDTN-- 148 (430)
T ss_pred hHHHHHhcCCCC-CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhh----hhcc--ccccc--
Confidence 44 578999985 89999999999999999999999999999999999999998755321110 0000 01111
Q ss_pred cccccccc---CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCcc
Q 015003 157 DGLWDVYN---DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE 233 (414)
Q Consensus 157 ~~~~~~~~---~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~ 233 (414)
+..|+. +..+++.+++|+++||+|+|+++++++++|+||..||.+.. ..
T Consensus 149 --~~~~~g~~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~--------------------------~~ 200 (430)
T PRK06365 149 --FDYPLGGFYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQS--------------------------PM 200 (430)
T ss_pred --ccccccCccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhc--------------------------CC
Confidence 112221 24589999999999999999999999999999999887421 11
Q ss_pred ccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--CCcc-----------
Q 015003 234 KFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--PEWF----------- 300 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--~~~~----------- 300 (414)
++|.|+|++++++++ |+|++|||+++|||+|+||+|++.+++++.+| ++|.+++..... +...
T Consensus 201 ~~t~e~v~~s~~i~~---Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~ 276 (430)
T PRK06365 201 KITVEDVRKSPMVSY---PLTRLDVCAMSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTLRLADRPFGEVPLLPNE 276 (430)
T ss_pred CCCHHHHhcCCcccc---CcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eEEEEEEEecccccccccccccccccccc
Confidence 288999999999986 99999999999999999999999999998877 688888776542 1110
Q ss_pred -------------c--cchHHHHHHHHHHcCCC--CCCCceeeccccchhHHHHHHHHcCCCCC----------------
Q 015003 301 -------------T--TAPSLAIPKAIANAGLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE---------------- 347 (414)
Q Consensus 301 -------------~--~~~~~a~~~al~~aGl~--~~DId~~~~hd~~~~~~~~~~e~lGl~~~---------------- 347 (414)
. ...+.+++++|+++|++ ++|||++|+||+|+++.+.++|.|||+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G 356 (430)
T PRK06365 277 SPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPG 356 (430)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCC
Confidence 0 12247999999999998 89999999999999999999999999983
Q ss_pred --CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCC
Q 015003 348 --QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (414)
Q Consensus 348 --~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~ 383 (414)
|||++||.+++|||.|+||+++++|+++|||+++++
T Consensus 357 ~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~ 394 (430)
T PRK06365 357 KLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKK 394 (430)
T ss_pred CccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999998754
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-54 Score=432.67 Aligned_cols=348 Identities=19% Similarity=0.222 Sum_probs=285.1
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCCC
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNS 89 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~~ 89 (414)
|+++|+|||+++|||+|+. .+..+|+.+|+++||+|+|+++++||.+++++..+.. ..+..+..++..+|++ .
T Consensus 2 ~~~~v~Ivg~~~t~~~r~~-----~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 2 MPEPVYILGAGMHPWGKWG-----RDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCCcEEEEEecccccCCCC-----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 6688999999999999852 5789999999999999999999999999988766543 2344567899999996 4
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccc--cccccccccCCc
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML--KDGLWDVYNDFG 167 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 167 (414)
.+.++++.+|+|++.+|.+|+.+|++|.+|+|||+|+|+++...+.. . .+..+... +.+. ..++.. +..
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~-~--~~~~~~~~---~~~~~~~~g~~~---~~~ 146 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAP-V--GGERPDDP---DWLRFHLIGATN---PVY 146 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcc-c--cccccccc---chhhcccCCCcc---HHH
Confidence 78999999999999999999999999999999999999988521110 0 00000000 0000 012211 256
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (414)
|++.+++|+++||+|+|+++.+++++|+++..||.+ .+|+ +|.|+|++++|+
T Consensus 147 ~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A---------------------------~~r~~~t~e~v~~s~~i 199 (399)
T PRK06059 147 FALLARRRMDLYGATVEDFAQVKVKNARHGLLNPNA---------------------------RYRKEVTVEDVLASPVV 199 (399)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHh---------------------------hcCCCCCHHHHhcCCcc
Confidence 999999999999999999999999999999877653 2233 899999999999
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHc--CCcceEEEEEEEEeecCC-----Cc--cc-------cc-----hH
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALEL--GLQVIAKIRGFADAAQAP-----EW--FT-------TA-----PS 305 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~--~~~~~~~i~g~~~~~~~~-----~~--~~-------~~-----~~ 305 (414)
++ |++++|||+++|||+|+||++++.++++ +.++.++|.+++...... .. +. .. .+
T Consensus 200 ~~---Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 276 (399)
T PRK06059 200 SD---PLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKD 276 (399)
T ss_pred cC---CCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHH
Confidence 87 9999999999999999999999999998 555558999998765321 11 11 11 24
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHH
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGA 367 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~ 367 (414)
.+++++|+++|++++|||++|+||+|+++.+..+|.|||+++ |||++||++++|||.|+||+
T Consensus 277 ~a~~~a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~ 356 (399)
T PRK06059 277 QILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAI 356 (399)
T ss_pred HHHHHHHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHH
Confidence 679999999999999999999999999999999999999975 99999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-------CeeEEeecccccceeeEEEEE
Q 015003 368 RILVTLLGVLRHKKG-------KYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 368 ~~l~~~~~ql~~~~~-------~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+++.|+++|||++++ ++++.+.++++|.+.++|||+
T Consensus 357 ~~~~e~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 357 AQVCELTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred HHHHHHHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 999999999998743 456777777778889999874
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-54 Score=433.34 Aligned_cols=341 Identities=19% Similarity=0.237 Sum_probs=271.6
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCC--Cc-HHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG--QA-PARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~--~~-~a~~va~~lgl~ 87 (414)
|+++|+|||+++|||+|+ +..++.++.+|+.+|+++||+|+|+++++||.+++++.+++... .. .........++.
T Consensus 1 ~~~~v~Ivg~~~t~~~r~-~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (403)
T PRK06289 1 MSDDVWVLGGYQSDFARN-WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW 79 (403)
T ss_pred CCCcEEEEeCCcCccccc-cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC
Confidence 456899999999999986 34456899999999999999999999999999999987654211 11 111111233443
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc-CC
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN-DF 166 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 166 (414)
+.|+++++++|+|++.+|..|+.+|++|++|+|||+|+|+++..|...... .++... ++...++..|+. +.
T Consensus 80 -g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~ 151 (403)
T PRK06289 80 -GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAE----HLGAAA---WTGHEGQDARFPWPS 151 (403)
T ss_pred -CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHH----hhhccc---ccccccccCCCccHH
Confidence 468999999999999999999999999999999999999998755321110 011000 011122323333 34
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
.|++.|++||++||+|+|+++++++++|++|..||++.. +.+ +.. .+++.++++.++++
T Consensus 152 ~~al~a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~-~~~----------------~~~----~~~~~~d~~~s~~i 210 (403)
T PRK06289 152 MFARVADEYDRRYGLDEEHLRAIAEINFANARRNPNAQT-RGW----------------AFP----DEATNDDDATNPVV 210 (403)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhc-Ccc----------------ccc----cccchhhhhcCCcc
Confidence 589999999999999999999999999999999998632 221 111 13778889999998
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCC-cceEEEEEEEEeecCC-------------CccccchHHHHHHHH
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAP-------------EWFTTAPSLAIPKAI 312 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~-~~~~~i~g~~~~~~~~-------------~~~~~~~~~a~~~al 312 (414)
.+ |+|++|||+++|||+|+||++++.+++++. ++.++|+|++.++... ..+ ..+..+++++|
T Consensus 211 ~~---Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~ 286 (403)
T PRK06289 211 EG---RLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAY 286 (403)
T ss_pred cC---CCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHH
Confidence 65 999999999999999999999999999876 5668999999875421 111 22467999999
Q ss_pred HHcCCCCCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHH
Q 015003 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLL 374 (414)
Q Consensus 313 ~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (414)
+++|++++|||++|+||+|+++.+..+|.|||+++ |+|++||.+++|||.|++|++++.|++
T Consensus 287 ~~Agi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~ 366 (403)
T PRK06289 287 RRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAA 366 (403)
T ss_pred HHcCCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHH
Confidence 99999999999999999999999999999999984 899999999999999999999999999
Q ss_pred HHHHhcCCCee
Q 015003 375 GVLRHKKGKYG 385 (414)
Q Consensus 375 ~ql~~~~~~~~ 385 (414)
+|||++++.+|
T Consensus 367 ~QLrg~ag~~Q 377 (403)
T PRK06289 367 KQVTGTAGDYQ 377 (403)
T ss_pred HHHhccccCcc
Confidence 99999876553
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-54 Score=428.64 Aligned_cols=330 Identities=21% Similarity=0.289 Sum_probs=273.0
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
|.++|+|||+++|||+|+. +.+..+|+.+|+++||+|+||+++|||.+++|+....+........++..+|++ ..
T Consensus 5 ~~~~v~IvG~g~tp~~~~~----~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 5 IKDKVAILGMGCTKFGERW----DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NI 79 (398)
T ss_pred CCCCeEEEEeccccccccC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CC
Confidence 4478999999999999864 478999999999999999999999999999998654331122335688899997 48
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccc-ccccccccCCchH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK-DGLWDVYNDFGMG 169 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 169 (414)
+.++++.+|+|++.++.+|+.+|++|++|+|||+|+|+++..|+..... . ..+. ..+.. .++. .+..++
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~--~-~~~~----~~~~~~~~~~---~~~~~a 149 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPV--A-NPGT----LADMTMPNVT---APGNFA 149 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccc--c-cccc----chhcccccCc---hHHHHH
Confidence 9999999999999999999999999999999999999998755321000 0 0000 00000 0111 124689
Q ss_pred HHHHHHHHHcCCCHHHH----HHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCcc-ccCHHHHhcCC
Q 015003 170 VCAEICANKHTITRDEQ----DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLE-KFDAAKLMKLR 244 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l----~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~ 244 (414)
+.+++|+++||+|+|++ +.+++++|+||..||.+ .++ ++|.|+|+++|
T Consensus 150 l~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A---------------------------~~r~~~t~e~v~~s~ 202 (398)
T PRK06157 150 QLASAYAAKYGVSREDLKRAMAHVSVKSHANGARNPKA---------------------------HLRKAVTEEQVLKAP 202 (398)
T ss_pred HHHHHHHHHhCCCHHHHcccccHHHHHHHHHHhcCChh---------------------------hcCCCCCHHHHhcCC
Confidence 99999999999999999 79999999999998863 122 28999999999
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC----------CccccchHHHHHHHHHH
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP----------EWFTTAPSLAIPKAIAN 314 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~----------~~~~~~~~~a~~~al~~ 314 (414)
|+++ |++++|||+++|||+|+||+|++.+++++.++.++|.|++...+.. ..+. .+..+++++|++
T Consensus 203 ~v~~---Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~ 278 (398)
T PRK06157 203 MIAG---PLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYRE 278 (398)
T ss_pred cccC---CCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHH
Confidence 9987 9999999999999999999999999999874558999998875421 1111 256799999999
Q ss_pred cCCC--CCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHH
Q 015003 315 AGLE--ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLL 374 (414)
Q Consensus 315 aGl~--~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (414)
+|++ ++|||++|+||+|+++++.++|.|||+++ |+|++||.+++|||.|++|+++++|++
T Consensus 279 AGl~~~~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~ 358 (398)
T PRK06157 279 AGITDPREELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMY 358 (398)
T ss_pred cCCCCchhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHH
Confidence 9998 79999999999999999999999999984 899999999999999999999999999
Q ss_pred HHHHhcCCCeeE
Q 015003 375 GVLRHKKGKYGV 386 (414)
Q Consensus 375 ~ql~~~~~~~~l 386 (414)
+||+++++.||+
T Consensus 359 ~QLrg~ag~rQv 370 (398)
T PRK06157 359 LQLLGRAGERQL 370 (398)
T ss_pred HHhcccccCccC
Confidence 999999876664
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-54 Score=426.49 Aligned_cols=326 Identities=21% Similarity=0.158 Sum_probs=274.3
Q ss_pred CCCceEEEeeecCcc-ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC--CCcHHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPM-GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL--GQAPARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~-~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~--~~~~a~~va~~lgl~ 87 (414)
|+++|+|||+++||| .++. +.+..+|+.+|+++||+|||++++|||.+++++ .++.. ...++..++..||++
T Consensus 1 ~~~~v~IvG~g~t~~~~~~~----~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 1 MKRLAAVLGTGQTKYVAKRQ----DVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCCcEEEEEeecCCcCccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC
Confidence 678999999999999 6654 478999999999999999999999999999886 33321 124556899999997
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccc---c
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY---N 164 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 164 (414)
..++++++++|+++..++..|+.+|++|.+|+|||+++|+++.....+.. . .+ ..+..|+ .
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~-------~----~~----~~~~~~~g~~~ 139 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWAL-------S----IP----VPFTKPVGAGA 139 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCcccccc-------c----cc----cccccccccch
Confidence 47899999999999999999999999999999999999998753111100 0 00 0122222 2
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
+..|++.+++||++||+++|+++++++++|++|..||.+.. ++ +++|.|+|+++|
T Consensus 140 ~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~~-r~------------------------~~~t~e~v~~s~ 194 (386)
T PRK08313 140 GGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAHL-HQ------------------------PDITLEKVMASQ 194 (386)
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHhc-CC------------------------CCCCHHHHhcCC
Confidence 46799999999999999999999999999999999997521 11 128999999999
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC------ccccchHHHHHHHHHHcCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE------WFTTAPSLAIPKAIANAGLE 318 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~------~~~~~~~~a~~~al~~aGl~ 318 (414)
|+++ |+|++|||+++|||+|+||+|++.+++++.++.++|.|++..++... ......+.+++++|+++|++
T Consensus 195 ~ia~---Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~ 271 (386)
T PRK08313 195 MLWD---PIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGIT 271 (386)
T ss_pred cccC---CCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCC
Confidence 9988 89999999999999999999999999987777789999998764211 11235578999999999998
Q ss_pred --CCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 319 --ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 319 --~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
++|||++|+||+|++..+..+|.|||+++ |+|++||.++ |||.|++|+.++.|+++|||
T Consensus 272 ~p~~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlr 350 (386)
T PRK08313 272 DPRDEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVM 350 (386)
T ss_pred CChhhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhc
Confidence 79999999999999999999999999987 9999999999 99999999999999999999
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
++++.||+
T Consensus 351 G~ag~rQv 358 (386)
T PRK08313 351 GKAGEHQV 358 (386)
T ss_pred ccccCCcC
Confidence 98766553
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-54 Score=429.69 Aligned_cols=335 Identities=24% Similarity=0.265 Sum_probs=272.6
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCccee
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~ 93 (414)
+|+|||+++|||+++. .+.+..+|+.+|+++||+|+|+++++||.+++|+..++... ...+...+|++ +.+.+
T Consensus 2 ~v~IvG~~~t~~~~~~---~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~ 74 (391)
T PRK08256 2 KVFVAGVGMTPFEKPG---ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIV 74 (391)
T ss_pred cEEEEeccccccccCC---CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCc
Confidence 6999999999999642 34788999999999999999999999999999887654321 23456778996 47899
Q ss_pred eEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCc-ccccc-ccccccccccCCchHHH
Q 015003 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDT-IVDGM-LKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 94 ~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 171 (414)
+++.+|+|++.+|..|+++|++|++|+|||+|+|+++..+...........++... ..+.+ ...++ +.....|++.
T Consensus 75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~ 152 (391)
T PRK08256 75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPA--PPALRMFGGA 152 (391)
T ss_pred ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccC--CccHHHHHHH
Confidence 99999999999999999999999999999999999976442110000000010000 00000 00111 0112469999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGG 251 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 251 (414)
|++|+++||+|+|+++++++++|+||..||.+ .|++ ++|.|+|+++||+++
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~~~-------------------------~~t~e~~~~s~~i~~--- 203 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAANNPYA-QFRD-------------------------EYTLEDVLASPMIWG--- 203 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hcCC-------------------------CCCHHHHhcCCcccC---
Confidence 99999999999999999999999999999863 2221 289999999999987
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcccc----------chHHHHHHHHHHcCCCCCC
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT----------APSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~----------~~~~a~~~al~~aGl~~~D 321 (414)
|+|++|||+++|||+|+||++++.+++++..+.++|.|++..++.+..+.. .+..+++++|+++|++++|
T Consensus 204 Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~D 283 (391)
T PRK08256 204 PLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPED 283 (391)
T ss_pred CCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHH
Confidence 899999999999999999999999999886677999999887764432221 2468999999999999999
Q ss_pred CceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCC
Q 015003 322 IDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK 383 (414)
Q Consensus 322 Id~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~ 383 (414)
||++|+||+|+++.+.++|.|||+++ |+|++||.+++|||.|+||+.++.|+++||++++++
T Consensus 284 iD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~ 363 (391)
T PRK08256 284 IDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGA 363 (391)
T ss_pred CCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCcCC
Confidence 99999999999999999999999998 999999999999999999999999999999999887
Q ss_pred eeE
Q 015003 384 YGV 386 (414)
Q Consensus 384 ~~l 386 (414)
+|+
T Consensus 364 ~Qv 366 (391)
T PRK08256 364 RQV 366 (391)
T ss_pred CcC
Confidence 753
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-53 Score=423.18 Aligned_cols=321 Identities=23% Similarity=0.234 Sum_probs=267.3
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
+.++|+|||+++|||.|+. +.+..+|+.+|+++||+|+|++++|||.+++++... +.....++..||++ ..
T Consensus 6 ~~~~vaIvG~g~t~~~~~~----~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 6 LRGRTAIVGAATAGLGEAP----GLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCCCEEEEEeeeccceeCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Ce
Confidence 3478999999999998774 479999999999999999999999999999986432 22335688999997 47
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEE-ecccCCCCchhhhhhhccCCCCCCcccccccccccccccc----C
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAG-GMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN----D 165 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~-g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 165 (414)
+.++++.+|+++..+|..|+.+|++|.+|+|||+ +.|+++... .. ... ..+ ..+..|+. +
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~-~~---------~~~-~~~----~~~~~~~g~~~~~ 141 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGG-KL---------RSM-LDP----QPYEAPYKPVNPV 141 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcc-cc---------ccc-ccc----cchhcccCCCCcH
Confidence 8889999999999999999999999999999997 666554310 00 000 000 01112322 3
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
..|++.+++||++||+|+|+++++++++|++|..||.+.. + +++|.|+|+++||
T Consensus 142 ~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~-~-------------------------~~~t~e~vl~s~~ 195 (384)
T PRK06158 142 SAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFM-R-------------------------DPLTIDDVLAARM 195 (384)
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhh-C-------------------------CCCCHHHHhcCCc
Confidence 5689999999999999999999999999999999887421 1 1289999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC------CccccchHHHHHHHHHHcCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEA 319 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~aGl~~ 319 (414)
+++ |+|++|||+++|||+|+||++++.+++++.++ ++|.+++.+++.. +........+++++|+++|+++
T Consensus 196 ia~---Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p 271 (384)
T PRK06158 196 VSD---PLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTP 271 (384)
T ss_pred cCC---CCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCH
Confidence 987 99999999999999999999999999988777 7999998775421 1122344679999999999999
Q ss_pred CCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcC
Q 015003 320 SQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (414)
Q Consensus 320 ~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~ 381 (414)
+|||++|+||+|++.++.++|.|||+++ |+|++||++++||| |++|+.+++|+++|||+++
T Consensus 272 ~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a 350 (384)
T PRK06158 272 ADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA 350 (384)
T ss_pred HHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999987 89999999999999 9999999999999999987
Q ss_pred CCeeE
Q 015003 382 GKYGV 386 (414)
Q Consensus 382 ~~~~l 386 (414)
++||+
T Consensus 351 g~rQv 355 (384)
T PRK06158 351 GERQV 355 (384)
T ss_pred CCCcC
Confidence 76553
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-53 Score=418.32 Aligned_cols=342 Identities=21% Similarity=0.217 Sum_probs=270.6
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCeEEEEeecCCCCC-CcHHHHHHHHCCCCC
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRAN-VKP-LLVQEVFFGNVLSANLG-QAPARQAALGAGIPN 88 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAg-i~~-~~Id~vi~g~~~~~~~~-~~~a~~va~~lgl~~ 88 (414)
|++|+|||+++|||+|+.. +.+..+|+.+|+++||+||| +++ +|||.+++++. ..+.+ ......++..+|+.
T Consensus 3 ~~~vaIvG~g~t~~~~~~~---~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~- 77 (385)
T PRK06066 3 LNRVAIVGIGWYGFRPTTP---EVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA- 77 (385)
T ss_pred CCcEEEEEeeecCCcCCCC---CCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC-
Confidence 4789999999999997532 47899999999999999999 987 79999988542 21211 11223466778884
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc---C
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN---D 165 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 165 (414)
..|...+ |+|+..++..|+.+|++|.+|+|||+++|+++.. ..... .++. ..++ .+..|+. +
T Consensus 78 ~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~-~~~~~-----~~~~--~~~~----~~~~p~g~~~p 142 (385)
T PRK06066 78 MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDI-LTFSD-----VVKF--AMDP----IYVRPIGPPNP 142 (385)
T ss_pred CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCc-cchhh-----hhhc--ccCc----ceecccCCCcH
Confidence 3567766 8899999999999999999999999999987652 11110 0000 0111 1222333 2
Q ss_pred C-chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 166 F-GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 166 ~-~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
. .+++.|++||++||+|+|+|+.+++++|+||..||++. |++ ++|.|+|++++
T Consensus 143 ~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~-~r~-------------------------~~t~edvl~S~ 196 (385)
T PRK06066 143 HFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPRAS-YAS-------------------------NISLEDVLSSE 196 (385)
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCChhh-cCC-------------------------CCCHHHHhcCC
Confidence 2 46999999999999999999999999999999999852 121 28999999999
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC----CCccccch--HHHHHHHHHHcCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA----PEWFTTAP--SLAIPKAIANAGLE 318 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~----~~~~~~~~--~~a~~~al~~aGl~ 318 (414)
|+++ |+|++|||+++|||+|+||++++.+++++.+| ++|.|++..++. +.++...+ +.+++++|+++|++
T Consensus 197 ~ia~---Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~p-v~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~ 272 (385)
T PRK06066 197 YVVY---PLTELDIAPFVDGAIVVVLASEEVAKKLTDDP-VWIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIE 272 (385)
T ss_pred cccC---CchhhccCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCC
Confidence 9988 99999999999999999999999999998888 599999886542 22222233 47999999999998
Q ss_pred --CCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 319 --ASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 319 --~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
++|||++|+||+|+++++.++|.|||+++ |+|++||.+++|||.|++|+.++.|+++||+
T Consensus 273 ~p~~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~ 352 (385)
T PRK06066 273 SPRKEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLR 352 (385)
T ss_pred CCHHHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHc
Confidence 79999999999999999999999999983 7999999999999999999999999999999
Q ss_pred hcCCCee------EEeeccc--ccceeeEEEEE
Q 015003 379 HKKGKYG------VGGICNG--GGGASALVLEL 403 (414)
Q Consensus 379 ~~~~~~~------l~~~~~~--gg~~~a~vl~~ 403 (414)
++++.|| +.+..+| ++.++..|||+
T Consensus 353 g~Ag~rQ~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 353 GEAGARQGKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred ccccccCCCCcEEEEcCCCccCCccEEEEEEeC
Confidence 9877666 5543332 13345666663
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-52 Score=419.34 Aligned_cols=332 Identities=26% Similarity=0.319 Sum_probs=277.2
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC--CCcHHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL--GQAPARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~--~~~~a~~va~~lgl~~~~ 90 (414)
++|+|||+++|||.++. +.++.+|+.+|+++||+|+|+++++||.+++|+..++.. .+.++..++..+|++ ..
T Consensus 2 ~~v~IvG~~~tp~~~~~----~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~ 76 (389)
T PRK06064 2 RDVAIIGVGQTKFGELW----DVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PI 76 (389)
T ss_pred CcEEEEEcccccceecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CC
Confidence 68999999999998864 479999999999999999999999999999998765442 356788899999997 58
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
++++++++|+|++.+|..|+.+|++|.+|+|||+|.|+++..|....... .+. ..++. ++..+....+..|++
T Consensus 77 ~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~----~~~--~~~~~-~~~~~g~~~~~~~al 149 (389)
T PRK06064 77 PATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEA----IAR--AGDYE-WEEFFGATFPGLYAL 149 (389)
T ss_pred CeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhh----hhc--ccccc-cccccCCchHHHHHH
Confidence 99999999999999999999999999999999999999886543111000 000 00110 011111111247999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
.+++|+++||+|+|+++++++++|++|..||.+ .+++ +++.|+|++++|+++
T Consensus 150 ~a~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a-~~~~-------------------------~~t~~~~~~s~~i~~-- 201 (389)
T PRK06064 150 IARRYMHKYGTTEEDLALVAVKNHYNGSKNPYA-QFQK-------------------------EITVEQVLNSPPVAD-- 201 (389)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHh-hhCC-------------------------CCCHHHHhcCCcccC--
Confidence 999999999999999999999999999999873 2221 289999999999987
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----c--cccchHHHHHHHHHHcCCCCCCCc
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----W--FTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~--~~~~~~~a~~~al~~aGl~~~DId 323 (414)
|+|++|||+++|||+|+||++++.+++++.++ ++|.|++...+.+. + .......+++++|+++|++++|||
T Consensus 202 -Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 202 -PLKLLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred -CCchhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 89999999999999999999999999987666 69999998765431 1 123446899999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--CC
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--GK 383 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--~~ 383 (414)
++++||+|+...+..+|.|||+++ |+|++||.+++|||.|++|+++++|+++||++++ ++
T Consensus 280 ~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~ 359 (389)
T PRK06064 280 VAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGR 359 (389)
T ss_pred EEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999874 8999999999999999999999999999999997 66
Q ss_pred eeE
Q 015003 384 YGV 386 (414)
Q Consensus 384 ~~l 386 (414)
||+
T Consensus 360 rqv 362 (389)
T PRK06064 360 QQV 362 (389)
T ss_pred ccC
Confidence 653
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-52 Score=418.54 Aligned_cols=330 Identities=22% Similarity=0.256 Sum_probs=267.3
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC--CCcHHHHHHHHCCCCCC
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL--GQAPARQAALGAGIPNS 89 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~--~~~~a~~va~~lgl~~~ 89 (414)
|++|+|||+++|||+|+. +.+..+|+.+|+++||+|+|+++++||.+++|+..+... ....+..+...+|++ .
T Consensus 1 ~~~v~Ivg~g~tpfgr~~----~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~ 75 (389)
T PRK07516 1 MMTASIVGWAHTPFGKLD----AETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F 75 (389)
T ss_pred CCcEEEEeCCcceeeecC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence 368999999999999864 478999999999999999999999999999998754331 122222344556775 5
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhh-hhccCCCCCCcccccccccccccccc-CCc
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAE-ARKGSRLGHDTIVDGMLKDGLWDVYN-DFG 167 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 167 (414)
.|+++++++|+|++.+|..|+.+|++|.+|+|||+|+|+++..|..... ......+.. .+ ...|+. +..
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~ 146 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLK-----EE----GDTPGGFAGV 146 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccc-----cc----cccCCCcHHH
Confidence 8999999999999999999999999999999999999999876542211 111101110 00 011111 236
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHH----HHhcC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAA----KLMKL 243 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~ 243 (414)
|++.|++||++||+++|+++.+++++|+||..||.+. +++ +++.| ++.++
T Consensus 147 ~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~-~~~-------------------------~~t~~~~~~~~~~~ 200 (389)
T PRK07516 147 FGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQ-MRK-------------------------DLGFEFCRTVSEKN 200 (389)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcCChhh-cCC-------------------------cccHHhhhhhhhcC
Confidence 9999999999999999999999999999999988742 121 14444 46778
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----Cc-cccchHHHHHHHHHHcCC
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EW-FTTAPSLAIPKAIANAGL 317 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~-~~~~~~~a~~~al~~aGl 317 (414)
+++.+ |+|++|||+++|||+|+||++++.+++++ ++ ++|.|++..++.. +. ....+..+++++|+++|+
T Consensus 201 ~~i~~---pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl 275 (389)
T PRK07516 201 PLVAG---PLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGV 275 (389)
T ss_pred CcccC---CCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCC
Confidence 88876 99999999999999999999999999884 44 8999999875421 11 123557899999999999
Q ss_pred CCCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
+++|||++|+||+|+++.+..+|.|||+++ |+|++||.+++|||.|+||++++.|+++||++
T Consensus 276 ~~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 276 TLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTG 355 (389)
T ss_pred CHHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999986 99999999999999999999999999999999
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+++.||+
T Consensus 356 ~ag~rQv 362 (389)
T PRK07516 356 EAGGMQI 362 (389)
T ss_pred CccCCcC
Confidence 9887764
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-52 Score=419.52 Aligned_cols=350 Identities=21% Similarity=0.282 Sum_probs=274.7
Q ss_pred cCCCceEEEeeecCcc-ccC-----------CCCCCCCCHHHHHHHHHHHHHHHcCCCccc--cCeEEEEeecCCC--CC
Q 015003 10 IKARDVCIVGVARTPM-GGF-----------LGSLSSVSATKLGSIAIECALKRANVKPLL--VQEVFFGNVLSAN--LG 73 (414)
Q Consensus 10 ~~~~~v~ivG~~~t~~-~~~-----------~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~--Id~vi~g~~~~~~--~~ 73 (414)
.| ++|+|||+++||| +|. .+.+.+.+..+|+.+|+++||+|+|++++| ||.+++|+..+.. .+
T Consensus 10 ~~-~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~ 88 (438)
T PTZ00455 10 AA-KRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQ 88 (438)
T ss_pred hc-CceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccc
Confidence 45 6899999999999 872 566678899999999999999999999999 9999999886544 34
Q ss_pred CcHHHHHHHHCCCC------CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCC
Q 015003 74 QAPARQAALGAGIP------NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGH 147 (414)
Q Consensus 74 ~~~a~~va~~lgl~------~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~ 147 (414)
++++..++..+|++ ..+|+++|+++|+|++.|+..|+++|++|.+|+|||+|+|+++..|...... .++.
T Consensus 89 ~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~----~~~~ 164 (438)
T PTZ00455 89 GHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGD----YLAR 164 (438)
T ss_pred cchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhh----hccc
Confidence 67777777666655 3689999999999999999999999999999999999999999876421100 0000
Q ss_pred CccccccccccccccccCCchHHHHHHHHHHcC-CCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceee
Q 015003 148 DTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT-ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIV 226 (414)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g-~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~ 226 (414)
...+... ..+.+...+..++..+ +||.+|| +|+|+++.+++++|+++..||.+....+.+.. -.
T Consensus 165 ~~~~~~~--~~~~~~~~~~~~a~~~-~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~------------~~ 229 (438)
T PTZ00455 165 AADYRRQ--RKLDDFTFPCLFAKRM-KYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSL------------EF 229 (438)
T ss_pred hhhcccc--ccccCcchHHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCc------------ee
Confidence 0000000 0011100012244443 9999997 99999999999999999999875322221100 01
Q ss_pred ecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcc----eEEEEEEEEeec----CC-
Q 015003 227 DKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQV----IAKIRGFADAAQ----AP- 297 (414)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~----~~~i~g~~~~~~----~~- 297 (414)
..|+.++ ..++++++++.+ |++++|||+++|||+|+||+|++.+++++.+| .++|.+++...+ ++
T Consensus 230 ~~d~~~~---~~e~l~s~~i~~---pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~ 303 (438)
T PTZ00455 230 CTGASDK---NPKFLGNETYKP---FLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPP 303 (438)
T ss_pred ecccccc---chhhhcCCcccC---cCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCcc
Confidence 1222222 235777888876 89999999999999999999999999998776 689999998865 23
Q ss_pred --CccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCC------------------CCcCCCCCccc
Q 015003 298 --EWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP------------------EQVNAHGGAVS 357 (414)
Q Consensus 298 --~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~------------------~~vn~~Gg~~~ 357 (414)
..+. ....+++++|+++|++++|||++|+||+|+++++.++|.|||++ .|+|++||.++
T Consensus 304 ~~~~~~-~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la 382 (438)
T PTZ00455 304 DATRMF-TSRAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLS 382 (438)
T ss_pred ccccch-HHHHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhh
Confidence 2222 23689999999999999999999999999999999999999998 59999999999
Q ss_pred cCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 358 LGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 358 ~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
+|||.|+||++++.|+++||+++++++|+
T Consensus 383 ~GHP~gAtG~~~v~e~~~QLrg~ag~~Qv 411 (438)
T PTZ00455 383 FGHPVGATGVKQIMEVYRQMKGQCGEYQM 411 (438)
T ss_pred cCCCcchHHHHHHHHHHHHHhhccccCCC
Confidence 99999999999999999999988776654
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-52 Score=412.40 Aligned_cols=326 Identities=18% Similarity=0.163 Sum_probs=264.6
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
..+|+|||+++|||+|+.+ .+..+|+.+|+++||+||||+++|||.+++... ..... ...++..||++ ..+
T Consensus 4 ~~~vaIvG~g~t~~~~~~~----~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~---~~~~~-~~~~~~~lGl~-~~~ 74 (388)
T PRK08142 4 KGKAYIVGAYEHPTRKAPD----KSVAQLHAEVAKGALADAGLSLADVDGYFCAGD---APGLG-PASMVDYLGLK-LRH 74 (388)
T ss_pred CCCEEEEEEeeccceeCCC----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC---CCCcc-HHHHHHhCCCC-Cee
Confidence 3689999999999998753 789999999999999999999999999765211 11111 23588899996 478
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCC-ccccccccccccccccCCchHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD-TIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
...++++|+|+..++..|+.+|++|.+|+|||+++|++......... ...+... ...+.+...++ ..+..|++
T Consensus 75 ~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~---~~~~~~Al 148 (388)
T PRK08142 75 VDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTE---PRNWGADAPDAPFEAPYGP---TTHNLYAM 148 (388)
T ss_pred eccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccc---cccccccccccchhccccc---ccHHHHHH
Confidence 88999999999999999999999999999999999997542110000 0000000 00001111121 22467999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEG 250 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (414)
.+++||++||+|+|+++.+++++|++|..||.+.. ++ ++|.|+|+++|++++
T Consensus 149 ~a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~-r~-------------------------~~t~e~vl~s~~Ia~-- 200 (388)
T PRK08142 149 CAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAML-RD-------------------------VVTVEDVLNSPMIAD-- 200 (388)
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhc-CC-------------------------CCCHHHHhcCCcccC--
Confidence 99999999999999999999999999999997521 11 289999999999988
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCCCCCCcee
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~~DId~~ 325 (414)
|+|++|||+++|||+|+||++++.+++++.++ ++|.|++..++. ++........+++++|+++|++++|||++
T Consensus 201 -Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~ 278 (388)
T PRK08142 201 -PLHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYA 278 (388)
T ss_pred -CchhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 99999999999999999999999999987555 899999987542 22222345689999999999999999999
Q ss_pred eccccchhHHHHHHHHcCCCCC-------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC
Q 015003 326 EINEAFSVVAIANQKLLGLDPE-------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~-------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~ 382 (414)
|+||+|++.++.++|.|||+++ |+|++||.++.|||.|++|+.+++|+++|||++++
T Consensus 279 elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag 354 (388)
T PRK08142 279 SIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAH 354 (388)
T ss_pred EEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999764 89999999999999999999999999999998864
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=410.84 Aligned_cols=327 Identities=27% Similarity=0.326 Sum_probs=277.1
Q ss_pred EeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEcc
Q 015003 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK 97 (414)
Q Consensus 18 vG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~ 97 (414)
||+++|||+|+. +.++.+|+.+|+++||+|+|+++++||.+++++..+....+.++..++..+|++ ..+.++++.
T Consensus 1 vG~g~t~~~~~~----~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~ 75 (375)
T cd00829 1 VGVGMTPFGRRS----DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA 75 (375)
T ss_pred CeeeecCcccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence 689999999875 489999999999999999999999999999998876554577889999999997 689999999
Q ss_pred CCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc-CCchHHHHHHHH
Q 015003 98 VCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN-DFGMGVCAEICA 176 (414)
Q Consensus 98 aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~ 176 (414)
+|+|++.+|..|+.+|++|.+|+|||+|+|+++..|..... .. .... ..+.....+ .... +..|++.+++|+
T Consensus 76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~--~~-~~~~---~~~~~~~~~-~~~~~~~~~al~a~~~~ 148 (375)
T cd00829 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEA--GG-RASD---LEWEGPEPP-GGLTPPALYALAARRYM 148 (375)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchh--hc-cccc---hhhhhcccc-cCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999876531100 00 0000 000000001 1111 357999999999
Q ss_pred HHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccC
Q 015003 177 NKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256 (414)
Q Consensus 177 ~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 256 (414)
++||+|+|+++.+++++|++|..||++ .|++ ++|.|+++++||+++ |+|++
T Consensus 149 ~~~g~t~e~~~~va~~~~~~A~~np~A-~~~~-------------------------~~t~d~~~~~~~i~~---pl~~~ 199 (375)
T cd00829 149 HRYGTTREDLAKVAVKNHRNAARNPYA-QFRK-------------------------PITVEDVLNSRMIAD---PLRLL 199 (375)
T ss_pred HHhCCCHHHHHHHHHHHHHHHhcCChh-hcCC-------------------------CCCHHHHhcCCcccC---CCchh
Confidence 999999999999999999999999875 3221 388999999999986 99999
Q ss_pred CCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-------cccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-------FTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 257 ~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-------~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
|||+++|||+|+||++++.++++ .+++++|.|++...+.+.. ...++..+++++|+++|++++|||++|+||
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 99999999999999999999998 5666999999998765432 345668899999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 330 AFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
+|+++.+.++|.|||+++ |+|++||.+++|||+|++|++++.|+++||+++++.+|+
T Consensus 279 ~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv 353 (375)
T cd00829 279 CFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQV 353 (375)
T ss_pred cChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccC
Confidence 999999999999999983 899999999999999999999999999999998665544
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-51 Score=400.91 Aligned_cols=337 Identities=19% Similarity=0.163 Sum_probs=267.2
Q ss_pred CceEEEeeecCccccCCCCCCCCCH-HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCc-HHHHHHHHCCCCCCc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSA-TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQA-PARQAALGAGIPNSV 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~-~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~-~a~~va~~lgl~~~~ 90 (414)
++|+|+|+++|||+|+.. +.+. .+|+.+|+++||+|||++++|||.++.+.. ..+.+.. ....+...+|+.+..
T Consensus 2 ~~vaIvG~g~t~~~~~~~---~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~ 77 (352)
T PRK07937 2 RDVAVVGFAQAPHVRRTD---GTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPI 77 (352)
T ss_pred CcEEEEEeeccccccCCC---CCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCC
Confidence 789999999999998752 2444 899999999999999999999998864422 2222221 222344567874345
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccc-ccc---cCC
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW-DVY---NDF 166 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~ 166 (414)
+...+++ ++..++..|+.+|++|.+|+|||+++|+++..... .. +.. ..+ .++ .|+ .+.
T Consensus 78 ~~~~v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~--~~-----~~~--~~~-----~~~~~p~G~~~~~ 140 (352)
T PRK07937 78 NESHVEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLR--RV-----LAL--QLD-----PYTVAPLWPDSVS 140 (352)
T ss_pred ceEEecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCccchh--hh-----hhc--cCC-----cceeccCCCchHH
Confidence 6666664 68889999999999999999999999987631110 00 000 001 112 133 246
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
.|++.+++||++||+|+|+++++++++|+||..||++ +++ +|.|+|+++||+
T Consensus 141 ~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A---------------------------~~r-it~edvl~s~~i 192 (352)
T PRK07937 141 MAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSA---------------------------EPS-ISVDELLARPYF 192 (352)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchh---------------------------hcc-CCHHHHhcCCcc
Confidence 7999999999999999999999999999999999974 224 899999999999
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc--cccchHHHHHHHHHHc-CCCCCCCc
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--FTTAPSLAIPKAIANA-GLEASQID 323 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~--~~~~~~~a~~~al~~a-Gl~~~DId 323 (414)
++ |+|++|||+++|||+|+||++++++++++.++ ++|.|++...+.... ....+..+++++++++ |++++|||
T Consensus 193 a~---PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD 268 (352)
T PRK07937 193 AD---PLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLGARDLTRSPSTALAAEAATGGDAGGVD 268 (352)
T ss_pred cC---CchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCccccccccccHHHHHHHHHHhcCCCHHHCC
Confidence 88 99999999999999999999999999998888 999999987653221 1123456667777775 99999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccc-c-ceeeEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG-G-GASALV 400 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~g-g-~~~a~v 400 (414)
++|+||+|++.++..+|.|||+.+ |+|++||.++ |||.|++|+.++.|+++||++++.+++|.+..+|. + .+..+|
T Consensus 269 ~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg~~~~~~~v~v 347 (352)
T PRK07937 269 VAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDGSARRALAHATSGPALQQNLVAV 347 (352)
T ss_pred EEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhccCCCEEEEecccccccceEEEEE
Confidence 999999999999999999999764 9999999998 99999999999999999999998888998765552 2 345666
Q ss_pred EEE
Q 015003 401 LEL 403 (414)
Q Consensus 401 l~~ 403 (414)
||.
T Consensus 348 ~~~ 350 (352)
T PRK07937 348 LEG 350 (352)
T ss_pred Eec
Confidence 664
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-51 Score=407.42 Aligned_cols=347 Identities=33% Similarity=0.451 Sum_probs=278.1
Q ss_pred EeeecCccccCC---CCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHH-HHHHCCCCCCccee
Q 015003 18 VGVARTPMGGFL---GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ-AALGAGIPNSVVCT 93 (414)
Q Consensus 18 vG~~~t~~~~~~---~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~-va~~lgl~~~~~~~ 93 (414)
+|+++|||+|+. +......+.+|+.+|+++||+++|++|++||.+++|+..+++.++.++.. +...+|+. ++|++
T Consensus 1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~ 79 (393)
T cd00826 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAI 79 (393)
T ss_pred CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEE
Confidence 589999999976 66677899999999999999999999999999999998887666666664 55667775 68999
Q ss_pred eEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccc-ccc-ccccccCCchHHH
Q 015003 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML-KDG-LWDVYNDFGMGVC 171 (414)
Q Consensus 94 ~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 171 (414)
+|+++|+|++.++..|+.+|++|.++++||+|+|+++..|.... .....+++. ..+ ...+..+..+++.
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~---------~~~~~~~~~~~~~~r~~~~~~a~~s~~ 150 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNA---------KEKHIDVLINKYGMRACPDAFALAGQA 150 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccccc---------ccchhHHHHHHhCChhhccHHHHHHHH
Confidence 99999999999999999999999999999999999987542100 000001110 001 0012223577888
Q ss_pred HHHHHHHcCCCHHHHHHHHHHh---HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 172 AEICANKHTITRDEQDSYAIRS---FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~---~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
+++|+++||+++|++..+++++ |+++..||. ...++ +|.|++++++|++
T Consensus 151 ~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~---------------------------a~~~~~~t~e~~~~~~~i~ 203 (393)
T cd00826 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEY---------------------------IQFGDEASLDEIAKLRPAF 203 (393)
T ss_pred HHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCC---------------------------CCCCCCCCHHHHhcCCCcc
Confidence 8888888888888888777665 344444443 22223 8999999999998
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCC--cceEEEEEEEEeec------CCC----ccccchHHHHHHHHHHc
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGL--QVIAKIRGFADAAQ------APE----WFTTAPSLAIPKAIANA 315 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~--~~~~~i~g~~~~~~------~~~----~~~~~~~~a~~~al~~a 315 (414)
.+++|+|++|||+++|||+|+||+|++.+++++. ++ ++|.+.+...+ ++. .+...++.+++++|+++
T Consensus 204 ~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~-v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~A 282 (393)
T cd00826 204 DKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKA-REIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKA 282 (393)
T ss_pred CCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccc-cccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHc
Confidence 5557999999999999999999999999999874 23 45555544332 233 23456789999999999
Q ss_pred CCCCCCCceeeccccchhHHHHHHHHcCCCC------------------CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDP------------------EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 316 Gl~~~DId~~~~hd~~~~~~~~~~e~lGl~~------------------~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
|++++|||++|+||+|+++++.++|.|||++ .|+|++||.+++|||+|+||++++.|+++||
T Consensus 283 gi~~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL 362 (393)
T cd00826 283 GLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFEL 362 (393)
T ss_pred CCCHHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 5999999999999999999999999999999
Q ss_pred HhcCCCe-----eEEeecccccceeeEEEE
Q 015003 378 RHKKGKY-----GVGGICNGGGGASALVLE 402 (414)
Q Consensus 378 ~~~~~~~-----~l~~~~~~gg~~~a~vl~ 402 (414)
++++++| ++...+++||.+.++|+|
T Consensus 363 ~g~ag~~q~~~~~~~~~~~~Gg~g~a~~~~ 392 (393)
T cd00826 363 KGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392 (393)
T ss_pred hhhhccccCCCcCEEEEEcCCCceeEEEEe
Confidence 9986654 457778888889999987
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-51 Score=374.88 Aligned_cols=384 Identities=38% Similarity=0.607 Sum_probs=338.1
Q ss_pred CceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
.+|.||+..+|+++|- ++.+.+..+.+|...+.+..+++.+++|+.|.-+++|++...+.+-.-....+...|+|.++|
T Consensus 36 ~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvp 115 (435)
T KOG1389|consen 36 EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVP 115 (435)
T ss_pred cCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccc
Confidence 4899999999999984 788999999999999999999999999999999999999987666334455666789999999
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCC-chhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA-PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
..+++.-|+|+++++..-+..|++|.||+-|..|+|.|++. |..+... +......-..+.+++ ..|+.
T Consensus 116 v~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~-----~~~~~~~~~~A~dCl------lpmGi 184 (435)
T KOG1389|consen 116 VRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGS-----INPRLQKFEKARDCL------LPMGI 184 (435)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccc-----cChhhhhhhHHhhcc------ccccc
Confidence 99999999999999999999999999999999999999874 2222110 000000011222233 67999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCccccccee--eecCC--CCCCceeeecCCCccc-cCHHHHhcCCC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPV--EMSSG--RGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~--~~~~~--~~~p~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
+.+...++||+||++.+++++.+|++|..+.+.+.|++||+|+ ++.+. ..+| ++.+.|+++|+ +|++.+.+.+|
T Consensus 185 tsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~-i~v~~DeGiRp~ttl~~l~klkp 263 (435)
T KOG1389|consen 185 TSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKP-ITVSVDEGIRPNTTLESLAKLKP 263 (435)
T ss_pred chHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccc-eeEecCCCCCCCcchhHHhhcch
Confidence 9999999999999999999999999999999999999999999 44333 3356 45677999998 99999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCcee
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|..+|..|..+.+.++|||+|++|+....|.+++++.++....+......|..++.+|.-++.++++.+|+..+|||+|
T Consensus 264 vFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~F 343 (435)
T KOG1389|consen 264 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLF 343 (435)
T ss_pred hhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCchhhhHHHHHHcCCccccccee
Confidence 99999999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC--CeeEEeecccccceeeEEEEE
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|++++|..+.+++.+.|||+++++|+.||...+|||+|++|+++++.+++.|+.++. ++|++.+|.|-|.+++.|+++
T Consensus 344 EINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFer 423 (435)
T KOG1389|consen 344 EINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFER 423 (435)
T ss_pred ehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhccccccceEEEeecCCcchheeeec
Confidence 999999999999999999999999999999999999999999999999999986654 368999999999999999999
Q ss_pred eccee
Q 015003 404 MQAVR 408 (414)
Q Consensus 404 ~~~~~ 408 (414)
.+.|.
T Consensus 424 ~~~~d 428 (435)
T KOG1389|consen 424 GGGVD 428 (435)
T ss_pred CCCCc
Confidence 88653
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=395.41 Aligned_cols=324 Identities=20% Similarity=0.161 Sum_probs=256.6
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
.++|+|||+++|+|.|+. +.+..+|+.+|+++||+||||+++|||.+++++. . . . ....++..+|+++..+
T Consensus 3 ~~~v~IvG~g~t~~~r~~----~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~-~--~~~~l~~~lGl~~~~~ 73 (386)
T PRK07855 3 SGKAAIVGIGATEFSKNS----GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-T-N--PEIAVARALGIGELKF 73 (386)
T ss_pred CCCEEEEEeeecccccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-c-c--cHHHHHHHCCCCCCcc
Confidence 468999999999999874 4789999999999999999999999999987432 1 1 1 1245888999963246
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecc--cCCCCchhhhhhhccCCCCCCcccccccccccccccc----C
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME--SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN----D 165 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e--~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 165 (414)
...+.++|+++..++..|+.+|++|.+|+|||+++. +... .............. ....+. .+..|+. +
T Consensus 74 ~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~----~~~~~~g~~~~~ 147 (386)
T PRK07855 74 FSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGM-RFGQGQTGLAENPT-STGVDY----GWSYPHGLLTPA 147 (386)
T ss_pred eeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeeccccccc-cccccccccccccc-ccccch----hhhhhcCCCChH
Confidence 678999999999999999999999999999999983 2211 10000000000000 000000 1112222 2
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
..|++.+++||++||+|+|+++++++++|++|..||.+...++ ++|.|+|+++|+
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~-------------------------~~t~e~vl~s~~ 202 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGR-------------------------PITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCC-------------------------CCCHHHHhcCCc
Confidence 4699999999999999999999999999999999997522111 289999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC---------Cccc--cchHHHHHHHHHH
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP---------EWFT--TAPSLAIPKAIAN 314 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~---------~~~~--~~~~~a~~~al~~ 314 (414)
+++ |+|++|||+++|||+|+||+|++.+++++.++ ++|.|++..++.. .++. ...+.+++++|++
T Consensus 203 Ia~---Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~ 278 (386)
T PRK07855 203 IAE---PLRLLDCCQESDGAVALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQ 278 (386)
T ss_pred ccC---CchhhhcCCcCCceEEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHH
Confidence 988 99999999999999999999999999998777 6999998865311 0111 1234799999999
Q ss_pred cCCCCCCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHH
Q 015003 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (414)
Q Consensus 315 aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q 376 (414)
+|++++|||++|+||+|+++++.++|.|||+++ |+|++||.++.|||. |+.+++|+++|
T Consensus 279 AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~Q 355 (386)
T PRK07855 279 SGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQ 355 (386)
T ss_pred cCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHH
Confidence 999999999999999999999999999999975 999999999999986 88899999999
Q ss_pred HHhcCC
Q 015003 377 LRHKKG 382 (414)
Q Consensus 377 l~~~~~ 382 (414)
||++++
T Consensus 356 LrG~a~ 361 (386)
T PRK07855 356 LRGTSV 361 (386)
T ss_pred HhCCCc
Confidence 998754
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-49 Score=395.10 Aligned_cols=377 Identities=45% Similarity=0.638 Sum_probs=326.3
Q ss_pred CCceEEEeeecCccccCC-CCCCCCCHHHHHHHHHHHHHHHc--CCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCC
Q 015003 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA--NVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIP 87 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~AL~dA--gi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~ 87 (414)
+++|+|+|.++|||+++. +++.++.+.+|.....+..+++. ++++.+||.+++|+..+.. .+++.+..++..+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 478999999999999996 77777777777777777776533 6777789999999888875 6789999999999998
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
.+.|.++|+..|+|++.++..|++.|++|.+|+||++|+|+||..|+..+ +...... ..+++..+++++++.+..
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~----~~~~~~~-~~d~~~~~~~~~~~~~~~ 155 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGRE----GVRVLDS-AVDPMFEDPLGDATPGYL 155 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCcccc----chhhhhh-hhhhccccccccccchhH
Confidence 66999999999999999999999999999999999999999999886300 1111111 345566677777777789
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc---cCHHHHhcCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK---FDAAKLMKLR 244 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~ 244 (414)
|++.|++|+++||+|||++++|++++|+||..||+++.| ++|+|.++... + +..|+.++. .+.|.+...+
T Consensus 156 ~g~~A~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~---~---~~~dp~~r~d~~~~~dg~a~l~ 228 (392)
T COG0183 156 MGLTAERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS---P---VVADPLRRLDCSPTSDGAAALV 228 (392)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC---c---eecCCcccCCCCCChhhhcCce
Confidence 999999999999999999999999999999999999999 88988876554 3 677777775 8889999999
Q ss_pred CCccCC-CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCC-CCCC
Q 015003 245 PSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE-ASQI 322 (414)
Q Consensus 245 ~~~~~~-g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~-~~DI 322 (414)
|+++.. |..+..+.+.+.||++++++.+.+.+.+++..+++++.++..+..+|..+ ..+..++.++|..+++. .+||
T Consensus 229 ~a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edl 307 (392)
T COG0183 229 PAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDL 307 (392)
T ss_pred eccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhc
Confidence 998765 68889999999999999999999888888998888888888777677766 77889999999999999 9999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC----CeeEEeeccccc-cee
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG----KYGVGGICNGGG-GAS 397 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~----~~~l~~~~~~gg-~~~ 397 (414)
|+++.++.|..+.....+.+|. +|+|++||.++.|||+|+||++++.++++||+++.. ++++++.|.||| ++.
T Consensus 308 gl~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~~~~~~~~~g~~t~~~Ggg~~g~ 385 (392)
T COG0183 308 GLAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGV 385 (392)
T ss_pred CceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhccccccccceeeEEEecCcceeE
Confidence 9999999999999999999998 689999999999999999999999999999998666 688899999999 899
Q ss_pred eEEEEE
Q 015003 398 ALVLEL 403 (414)
Q Consensus 398 a~vl~~ 403 (414)
++||+.
T Consensus 386 a~vl~~ 391 (392)
T COG0183 386 AAVLER 391 (392)
T ss_pred EEEEec
Confidence 999986
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-47 Score=391.12 Aligned_cols=359 Identities=20% Similarity=0.134 Sum_probs=279.5
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC--ccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCC
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK--PLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS 89 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~--~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~ 89 (414)
.++|+|||+++|+|.+.... ...++.+|+.+|+++||+|+|++ +++||.+++++... +...+....++..||+.+
T Consensus 3 ~~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~-~~~~~~~~~la~~lGl~p- 79 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLS-WRYRDPPGLLAERLGADP- 79 (498)
T ss_pred CCcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccc-ccccCHHHHHHHHcCCCC-
Confidence 57899999999999875321 11388999999999999999999 99999999876643 334456678999999975
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCC------------Cccc--cccc
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGH------------DTIV--DGML 155 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~------------~~~~--~~~~ 155 (414)
.+......+|.++..++..|+.+|++|.+|+|||+|+|+++..+...... ....+.. .... +.+.
T Consensus 80 ~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (498)
T PRK08257 80 ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAG-EKLDWTPQDEGPLADRGGDPRPMASPAEL 158 (498)
T ss_pred cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhcccc-ccccccccccccccccccccccccchhhh
Confidence 45556677888999999999999999999999999999987533211000 0000000 0000 0011
Q ss_pred cccccccccCCchHHHHHHHHHHcCCCHHH-HHHH---HHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCC
Q 015003 156 KDGLWDVYNDFGMGVCAEICANKHTITRDE-QDSY---AIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEG 231 (414)
Q Consensus 156 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~-l~~~---a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~ 231 (414)
..++..| ...|++.+++||.+||+|+|+ ++++ .+++|++|..||++.. +
T Consensus 159 ~~G~~~p--~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~-r------------------------ 211 (498)
T PRK08257 159 RHGLDRP--VYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWI-P------------------------ 211 (498)
T ss_pred hcCCCCc--chHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhh-C------------------------
Confidence 1222221 246999999999999999998 4444 4589999999997421 1
Q ss_pred ccccCHHHHh----cCCCCccCCCccccCCCCc-ccCceeEEEEeCHHHHHHcCC--cceEEEEEEEEeecCCC-----c
Q 015003 232 LEKFDAAKLM----KLRPSFKEGGSVTAGNASI-ISDGAAALVLVSGVKALELGL--QVIAKIRGFADAAQAPE-----W 299 (414)
Q Consensus 232 ~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~-~~DGAaA~vL~s~~~a~~~~~--~~~~~i~g~~~~~~~~~-----~ 299 (414)
+++|.|+|+ ++|++++ |+++++||+ .+|||+|+||+|++.+++++. ...++|.|++.+++... +
T Consensus 212 -~~~t~eevl~~~~~~rmIa~---Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~ 287 (498)
T PRK08257 212 -RERSAEEIVTPTPDNRMIAW---PYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPD 287 (498)
T ss_pred -CCCCHHHHhcccCCCCeeeC---CccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccc
Confidence 128899999 7999988 999999996 899999999999999999873 22489999998865311 1
Q ss_pred cccc--hHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCC---CcCCCCCccccCCCccchHHHHHHHHH
Q 015003 300 FTTA--PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE---QVNAHGGAVSLGHPLGCSGARILVTLL 374 (414)
Q Consensus 300 ~~~~--~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~---~vn~~Gg~~~~Gh~~gasG~~~l~~~~ 374 (414)
+... .+.+++++|+++|++++|||++++||||++.++..+|.|||+++ |+|++||++++|||.+++|+.+++|++
T Consensus 288 ~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v 367 (498)
T PRK08257 288 LHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMV 367 (498)
T ss_pred cccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHH
Confidence 2222 24699999999999999999999999999999999999999988 999999999999999999999999999
Q ss_pred HHHHhcCCCeeEEeecccccc-eeeEEEEEec
Q 015003 375 GVLRHKKGKYGVGGICNGGGG-ASALVLELMQ 405 (414)
Q Consensus 375 ~ql~~~~~~~~l~~~~~~gg~-~~a~vl~~~~ 405 (414)
+|||+++++++|++..+|.++ ....||++..
T Consensus 368 ~QLRg~~~~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 368 ERLRANPGRRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred HHHhhcCCCEEEEECCCChhhceEEEEEeCCC
Confidence 999999999999976665444 4556776653
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-48 Score=349.10 Aligned_cols=352 Identities=26% Similarity=0.330 Sum_probs=284.7
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCccee
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT 93 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~ 93 (414)
+|||||+++|.|.|. ++..+.+..||+.+|+.+||+|++|+.++|+..++|..+++. .+....-..+|++ +.|.+
T Consensus 7 rvyvvgvgmtkf~kp-g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~ 81 (408)
T KOG1406|consen 7 RVYVVGVGMTKFEKP-GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIY 81 (408)
T ss_pred eEEEEecceeeecCC-CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-Cccee
Confidence 799999999999987 456678999999999999999999999999999999887643 3444555578997 79999
Q ss_pred eEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccc-cccc-ccccCCchHHH
Q 015003 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK-DGLW-DVYNDFGMGVC 171 (414)
Q Consensus 94 ~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 171 (414)
.|++.|+++.++|.+|.+.|++|.+|+||+.|+|+|+......... -..+......+-+.. -++. .|.....|+-.
T Consensus 82 nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~--dra~p~dkhi~~m~e~ygl~a~pmaaqmfgna 159 (408)
T KOG1406|consen 82 NVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAA--DRALPVDKHISVMSETYGLEAAPMAAQMFGNA 159 (408)
T ss_pred eccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhh--hccCcchhhHHHHHhhccCCCCcchHHHhhhh
Confidence 9999999999999999999999999999999999998743222110 000111111111110 0111 24445789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (414)
...+|++||..+|+++.++-++|+..-.||.+ +++. +++|++++++-+++
T Consensus 160 gkehmekygtk~ehfakiawknhkhsvnnpys---------------------------qf~deysldqvm~s~~v~d-- 210 (408)
T KOG1406|consen 160 GKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS---------------------------QFRDEYSLDQVMKSPQVVD-- 210 (408)
T ss_pred HHHHHHHhCCCHHHHhHhhhhccccccCChhH---------------------------hhhhhccHHHHhcchHHHH--
Confidence 99999999999999999998887777665542 2233 89999999999998
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcc-eEEEEEEEEeecCCCccccc----------hHHHHHHHHHHcCCCC
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQV-IAKIRGFADAAQAPEWFTTA----------PSLAIPKAIANAGLEA 319 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~-~~~i~g~~~~~~~~~~~~~~----------~~~a~~~al~~aGl~~ 319 (414)
.++.+.||+.+||++|.||.|+...++++... -++|.|..+.+|.|+.+..- .+.++++++++.|++|
T Consensus 211 -flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltp 289 (408)
T KOG1406|consen 211 -FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTP 289 (408)
T ss_pred -HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999888642 25788888888776655431 3689999999999999
Q ss_pred CCCceeeccccchhHHHHHHHHcCCCCC------------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcC
Q 015003 320 SQIDYYEINEAFSVVAIANQKLLGLDPE------------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (414)
Q Consensus 320 ~DId~~~~hd~~~~~~~~~~e~lGl~~~------------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~ 381 (414)
.||+++|+||||+..++...|+||+|++ -||++||+++.|||+|++|+.+-+|+.+|||+.+
T Consensus 290 ndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg~a 369 (408)
T KOG1406|consen 290 NDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGLA 369 (408)
T ss_pred ccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999996 6999999999999999999999999999999999
Q ss_pred CCeeEEe-------ecccccceeeEEEE
Q 015003 382 GKYGVGG-------ICNGGGGASALVLE 402 (414)
Q Consensus 382 ~~~~l~~-------~~~~gg~~~a~vl~ 402 (414)
++|++.. ..+-||.....+.+
T Consensus 370 gkrqvpnakvalqhnlgiggavvv~lyr 397 (408)
T KOG1406|consen 370 GKRQVPNAKVALQHNLGIGGAVVVALYR 397 (408)
T ss_pred ccccCCCchhhhhhccCcCceeEEEEee
Confidence 9998732 24555555444444
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=341.47 Aligned_cols=262 Identities=49% Similarity=0.743 Sum_probs=223.5
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
|++||||+..+|||+++.|.+.+.++.+|+.++++++|++++++|++||.+++|+..+...+++++.+++...|++.++|
T Consensus 1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp 80 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP 80 (264)
T ss_dssp -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence 58999999999999999999999999999999999999999999999999999999998788999999999999988899
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
+++|+..|+||+.|+.+|+.+|++|.+|++|++|+|+||..|+.....+.+..++.....+....+++++++....|+..
T Consensus 81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg~t 160 (264)
T PF00108_consen 81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMGIT 160 (264)
T ss_dssp EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHHHH
T ss_pred eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999887754344455555455556666788889999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (414)
|+.++++||+|||++++|+++||++|..++..+.|.+||+|++.+.+.+++ .++++|+.+|+ ++.|.+.+.||+|.++
T Consensus 161 AE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~g~~-~~~~~De~~r~~~~~e~l~~L~p~f~~~ 239 (264)
T PF00108_consen 161 AENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKKGEE-VTVDRDEGIRPDTTLEKLAKLKPAFRKD 239 (264)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETTSEE-EEE-S-STCGTT--HHHHHTS-BSSSTT
T ss_pred cccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccccce-eeeeccchhhcchhHHHHhccccccccc
Confidence 999999999999999999999999999999999999999999998776665 56899999999 9999999999999887
Q ss_pred -CccccCCCCcccCceeEEEEeCHH
Q 015003 251 -GSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 251 -g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
|.+|+.+.|+++|||+++||++++
T Consensus 240 ~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 240 GGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp TSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccCCCccchhheEEEeecC
Confidence 999999999999999999999875
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=327.33 Aligned_cols=389 Identities=31% Similarity=0.468 Sum_probs=338.1
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
.+++|.+|...+|||.-....++++.+.||+.++....|++..++.+.+|.+|+|+.+.+-...+++...+...|++...
T Consensus 40 n~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdkt 119 (465)
T KOG1392|consen 40 NMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKT 119 (465)
T ss_pred CCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCC
Confidence 56789999999999999888889999999999999999999999999999999999998888899999999999999889
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCC--------CCCcccccccccccccc
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRL--------GHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 162 (414)
|..+|..+|.|+..|+.....+|++|.+|+++++|+|.+|..|....+..+...+ +....+.+..+..|..|
T Consensus 120 pahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nflap 199 (465)
T KOG1392|consen 120 PAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLAP 199 (465)
T ss_pred ccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccCc
Confidence 9999999999999999999999999999999999999999999888764322111 11111111111111111
Q ss_pred -------c-cCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc
Q 015003 163 -------Y-NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (414)
Q Consensus 163 -------~-~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~ 234 (414)
| +...||.-+.++...|.++|.|.++|++++|-.|..+..++.|.+ ++|++++..... ..+|+++|.
T Consensus 200 elpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~~----t~kdngirv 274 (465)
T KOG1392|consen 200 ELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDPK----TIKDNGIRV 274 (465)
T ss_pred CcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCcc----eecCCCccc
Confidence 1 236799999999999999999999999999999999999999886 568877665432 459999999
Q ss_pred cCHHHHhcCCCCccCC-CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-cccchHHHHHHHH
Q 015003 235 FDAAKLMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-FTTAPSLAIPKAI 312 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-~~~~~~~a~~~al 312 (414)
.++|++.+.+|.|-+. |.+|+.+.+.+.|||.|.++++++++.+.|.+|-++++.+-+.+.+|.+ .-.+|...+.+.|
T Consensus 275 ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgpay~ipkll 354 (465)
T KOG1392|consen 275 SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGPAYVIPKLL 354 (465)
T ss_pred CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecccccccHHHH
Confidence 9999999999998655 9999999999999999999999999999999999999999888777654 4568889999999
Q ss_pred HHcCCCCCCCceeeccccchhHHHHHHHHcCCC-----------------CCCcCCCCCccccCCCccchHHHHHHHHHH
Q 015003 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLD-----------------PEQVNAHGGAVSLGHPLGCSGARILVTLLG 375 (414)
Q Consensus 313 ~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~-----------------~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (414)
+++|++.+|||.||+|++|..+.+..++++.-+ .+++|..||.+++|||+|++|++.......
T Consensus 355 ~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~an 434 (465)
T KOG1392|consen 355 DKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSAN 434 (465)
T ss_pred HHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHh
Confidence 999999999999999999999988777665421 148999999999999999999999999999
Q ss_pred HHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 376 VLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 376 ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
.|+.+.|.++++.+|..||++.+|++|..
T Consensus 435 rl~~e~gqygvvaacaaggqgvamlieay 463 (465)
T KOG1392|consen 435 RLKEEKGQYGVVAACAAGGQGVAMLIEAY 463 (465)
T ss_pred HHHhhcCceeEeehhhcCCcceEEEeecc
Confidence 99999999999999999999999999865
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=240.44 Aligned_cols=236 Identities=33% Similarity=0.381 Sum_probs=210.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
.+..+|+.+|+++||+++|++++|||.++++++.++...+..+..++..+|++ .++.+++..+|+|++.||..|+.+|+
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 34889999999999999999999999999999988766788889999999997 68999999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|+++.+||+++|. .
T Consensus 84 ~g~~~~~lv~~~e~--~--------------------------------------------------------------- 98 (254)
T cd00327 84 NGKADIVLAGGSEE--F--------------------------------------------------------------- 98 (254)
T ss_pred CCCCCEEEEEecce--e---------------------------------------------------------------
Confidence 99999999999996 1
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
. ++|||+|+||++++
T Consensus 99 -----------------~------------------------------------------------~gdGAaa~vL~~~~ 113 (254)
T cd00327 99 -----------------V------------------------------------------------FGDGAAAAVVESEE 113 (254)
T ss_pred -----------------e------------------------------------------------ecceEEEEEECcHH
Confidence 0 59999999999999
Q ss_pred HHHHcCCcceEEEEEEEEeecCCC----ccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCc-
Q 015003 275 KALELGLQVIAKIRGFADAAQAPE----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQV- 349 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~v- 349 (414)
.+++++.+++.++.++....+.+. .......++++++|+++|++++|||++++|+.++.......+.+++++++.
T Consensus 114 ~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~ 193 (254)
T cd00327 114 HALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVR 193 (254)
T ss_pred HHHHCCCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCC
Confidence 988888888899999887665433 223456799999999999999999999999999999888899998876544
Q ss_pred --CCCCCccccCCCccchHHHHHHHHHHHHHhc-------CCCeeEEeecccccceeeEEE
Q 015003 350 --NAHGGAVSLGHPLGCSGARILVTLLGVLRHK-------KGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 350 --n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~-------~~~~~l~~~~~~gg~~~a~vl 401 (414)
|+.+++..+||+.++++...+.+++++++.+ .+++.+...++.||++.+++|
T Consensus 194 ~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 194 SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 7889999999999999999999999999987 778889999999999988875
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=246.20 Aligned_cols=260 Identities=22% Similarity=0.193 Sum_probs=209.9
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+|+...++++..+|+.+|+++||++||++|+|||.||+.+.+++...|..+..++..||+. ++++|+++.+|++
T Consensus 37 rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~aaCsg 115 (323)
T COG0332 37 RTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQAACSG 115 (323)
T ss_pred ecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-CcceeechhhhHH
Confidence 566777776777899999999999999999999999999999999999999999999999999998 5999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
+++||..|..+|++|.++++||+|.|..|.. ..+
T Consensus 116 f~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~-ld~--------------------------------------------- 149 (323)
T COG0332 116 FLYALSVADGLIRSGGYKNVLVVGAETLSRI-LDW--------------------------------------------- 149 (323)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEehhHhhcc-CCH---------------------------------------------
Confidence 9999999999999999999999999999862 000
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
.| + ..|..+
T Consensus 150 ----------------------------------------------~d-------------------R------~t~vlF 158 (323)
T COG0332 150 ----------------------------------------------TD-------------------R------DTCVLF 158 (323)
T ss_pred ----------------------------------------------hh-------------------c------cceEEE
Confidence 00 1 133448
Q ss_pred cCceeEEEEeCHHHHHHcCCc-----------ceEEEEEEEEeecC--C--Cccc-----------cchHHHHHHHHHHc
Q 015003 262 SDGAAALVLVSGVKALELGLQ-----------VIAKIRGFADAAQA--P--EWFT-----------TAPSLAIPKAIANA 315 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~-----------~~~~i~g~~~~~~~--~--~~~~-----------~~~~~a~~~al~~a 315 (414)
+|||+|+||+..+ .+.+.. ..-++.+....... . ..+. .....+++++|+++
T Consensus 159 gDGAgAvvl~~~~--~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~ 236 (323)
T COG0332 159 GDGAGAVVLEATE--DDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKA 236 (323)
T ss_pred cCCceEEEEecCC--CCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999875 111110 00111111111100 0 0000 01247999999999
Q ss_pred CCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccc
Q 015003 316 GLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGG 395 (414)
Q Consensus 316 Gl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~ 395 (414)
|++++|||++.+||++..+...+.+.||++++++..+ ...+||+..+|-.+.+.++++.-+.+++++.+...+++|-+
T Consensus 237 ~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~--~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Glt 314 (323)
T COG0332 237 GLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVT--VDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLT 314 (323)
T ss_pred CCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhH--HHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcce
Confidence 9999999999999999999999999999998887776 56689999999999999999999988998888888888889
Q ss_pred eeeEEEEE
Q 015003 396 ASALVLEL 403 (414)
Q Consensus 396 ~~a~vl~~ 403 (414)
+.+++++.
T Consensus 315 wg~~~~r~ 322 (323)
T COG0332 315 WGAALVRW 322 (323)
T ss_pred eeeEEEEe
Confidence 99988874
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=251.36 Aligned_cols=270 Identities=21% Similarity=0.275 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
..+|+.+++++||+|+|++++++|. +++|+..+.. .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3679999999999999999999987 5555432210 011245578889999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
.+|.++++++|+|++.||..|+.+|++|++|++||+|+|.+.. |.....
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~~~~---------------------------- 199 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PLGIAG---------------------------- 199 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HHHHHH----------------------------
Confidence 4899999999999999999999999999999999999998665 322110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
..+.+ .+.+. ...+...++| |+.+
T Consensus 200 ---~~~~~------------------------------~ls~~---~~~~~~~~~p---fd~~----------------- 223 (407)
T TIGR03150 200 ---FAAMK------------------------------ALSTR---NDDPEKASRP---FDKD----------------- 223 (407)
T ss_pred ---HHHhC------------------------------cccCC---CCCCCcCCCC---CcCC-----------------
Confidence 00000 00000 0001223455 4444
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++++.+++++.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 224 --~~g~~-------~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~d 294 (407)
T TIGR03150 224 --RDGFV-------MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPED 294 (407)
T ss_pred --CCcEE-------EeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhH
Confidence 45555 7999999999999999999999999999999876532 222334678999999999999999
Q ss_pred Cceeeccccch----hHHHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFS----VVAIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~----~~~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||+++.|++++ ..+.. +.+.+|-...++++++.+..+||+.|++|+.++++++++|+++
T Consensus 295 Id~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 374 (407)
T TIGR03150 295 VDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECD 374 (407)
T ss_pred CCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 99999999999 34433 4455676555678888888899999999999999999999873
Q ss_pred -------C----CCeeEEeecccccceeeEEEE
Q 015003 381 -------K----GKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 381 -------~----~~~~l~~~~~~gg~~~a~vl~ 402 (414)
. .++.+.++++.||+++++||+
T Consensus 375 ~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 375 LDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred ccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 1 245678888999999999873
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=249.48 Aligned_cols=271 Identities=21% Similarity=0.280 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 38 TKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~I-d----~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
..|+..++++||+|+|++++++ + .+++|+..+.+ .....+.+++..+|+
T Consensus 83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 162 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence 4678999999999999988776 4 46666543211 001245678899999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
++|+++++++|+|++.||..|+.+|++|++|++||+|+|.+.. |.....
T Consensus 163 --~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~~~---------------------------- 211 (424)
T PRK06333 163 --KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RVSLAG---------------------------- 211 (424)
T ss_pred --CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH----------------------------
Confidence 4899999999999999999999999999999999999998654 322110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
|. . .+.+... -...++..++| |+++
T Consensus 212 -f~-~-------------------------------~~~l~~~--~~~~p~~~~~P---fd~~----------------- 236 (424)
T PRK06333 212 -FA-A-------------------------------ARALSTR--FNDAPEQASRP---FDRD----------------- 236 (424)
T ss_pred -HH-H-------------------------------ccccccc--CCCCCCcCCCC---CCCC-----------------
Confidence 00 0 0000000 00012446777 6666
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++|
T Consensus 237 --~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~d 307 (424)
T PRK06333 237 --RDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEE 307 (424)
T ss_pred --CCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 77777 79999999999999999999999999999998876322 22335579999999999999999
Q ss_pred Cceeeccccchh----HHHHH-HHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFSV----VAIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~~----~~~~~-~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||+++.|++++. .+... .+.|| ...+++++++|..+||+.|++|+.+++..+++|+.+
T Consensus 308 Id~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~ 386 (424)
T PRK06333 308 VQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAE 386 (424)
T ss_pred CCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcc
Confidence 999999999987 44443 34456 335799999999999999999999999999999973
Q ss_pred ------------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 ------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+.++++.||+++++||+..
T Consensus 387 ~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 387 GLDVVANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred ccccccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 124567788899999999999864
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-29 Score=244.19 Aligned_cols=274 Identities=23% Similarity=0.217 Sum_probs=214.2
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC----ccccCeEEEEeecCCCC-----------------
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVK----PLLVQEVFFGNVLSANL----------------- 72 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~----~~~Id~vi~g~~~~~~~----------------- 72 (414)
+++|+|++.+ ..+|+.+|+++||+++|++ +.+||.+++++..+...
T Consensus 1 ~~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (332)
T cd00825 1 RAVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVV 67 (332)
T ss_pred CceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchh
Confidence 4789999987 7799999999999999999 99999999988866543
Q ss_pred ----CCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCC
Q 015003 73 ----GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHD 148 (414)
Q Consensus 73 ----~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~ 148 (414)
.+..+.+++..+|+ ++++++++.+|+|++.+|..|..+|++|+++++||+++|..+. +......
T Consensus 68 ~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~-~~~~~~~--------- 135 (332)
T cd00825 68 TKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAA-PMDCEFD--------- 135 (332)
T ss_pred hcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHHHH---------
Confidence 45567889999999 4899999999999999999999999999999999999998765 2111000
Q ss_pred ccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeec
Q 015003 149 TIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDK 228 (414)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~ 228 (414)
... ....++..++| |+.
T Consensus 136 ----------------------------~~~--------------------------------~~~~~~~~~~~---~~~ 152 (332)
T cd00825 136 ----------------------------AMG--------------------------------ALSTPEKASRT---FDA 152 (332)
T ss_pred ----------------------------hhc--------------------------------cccCCCCCCCC---CCC
Confidence 000 00001122233 211
Q ss_pred CCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc-----ccc
Q 015003 229 DEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTA 303 (414)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~ 303 (414)
..+++.++||++|+||++++.+++++.++++.+.+.+...+..... ...
T Consensus 153 --------------------------~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 206 (332)
T cd00825 153 --------------------------AADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEG 206 (332)
T ss_pred --------------------------CCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHH
Confidence 1244558999999999999999988888889999998776532211 234
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCC---CcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE---QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~---~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
..++++++|+++|++++|||++++|+.+........+.+++... +++....+..+||+.+++++..+.+++++++.+
T Consensus 207 ~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~ 286 (332)
T cd00825 207 LARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHG 286 (332)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcC
Confidence 56899999999999999999999999998765544454444332 356666788999999999999999999999987
Q ss_pred -------------------------CCCeeEEeecccccceeeEEE
Q 015003 381 -------------------------KGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 381 -------------------------~~~~~l~~~~~~gg~~~a~vl 401 (414)
.+++.+...++.||+++++||
T Consensus 287 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 287 FIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred ccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 678889999999999998875
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=249.10 Aligned_cols=272 Identities=24% Similarity=0.310 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
..+|+.+++++||+|||++++++|. +++|+..+.. .....+.+++..+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 4578899999999999999998884 6666532210 112245678999998
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
++|+++++.+|+|++.||..|+.+|++|++|+|||+|+|.+.. |.....
T Consensus 152 --~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~~~---------------------------- 200 (411)
T PRK07314 152 --KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAIT-PLGIAG---------------------------- 200 (411)
T ss_pred --CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCC-HHHHHH----------------------------
Confidence 4899999999999999999999999999999999999998665 322110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
..+.+ .+... ...+...++| |+.+
T Consensus 201 ---~~~~~------------------------------~ls~~---~~~p~~~~~p---fd~~----------------- 224 (411)
T PRK07314 201 ---FAAAR------------------------------ALSTR---NDDPERASRP---FDKD----------------- 224 (411)
T ss_pred ---HHHhc------------------------------cccCC---CCCCCcCcCC---CcCC-----------------
Confidence 00000 00000 0011233455 5444
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++++.+++++.+++++|.|++...+. +........++++++|+++|++++|
T Consensus 225 --~dG~~-------~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~d 295 (411)
T PRK07314 225 --RDGFV-------MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPED 295 (411)
T ss_pred --CCCEe-------EEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 44555 899999999999999999999999999999987652 2223334678999999999999999
Q ss_pred Cceeeccccch-hHHHH----HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFS-VVAIA----NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~-~~~~~----~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||+++.|..++ ..... +.+.+|....++++++.|..+||+.+++|+..++.++++|+++
T Consensus 296 Id~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~ 375 (411)
T PRK07314 296 IDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECD 375 (411)
T ss_pred CCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCC
Confidence 99999999988 22222 3344555456788888899999999999999999999999975
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+.++++.||.++++||+..
T Consensus 376 ~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 376 LDYVPNEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred ccccCCcccCCCCCEEEEecccCCCceEEEEEecC
Confidence 124567888999999999999864
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=245.73 Aligned_cols=275 Identities=22% Similarity=0.289 Sum_probs=208.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCC-ccccCeEEEEeecCCCCC------------------------------CcHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVK-PLLVQEVFFGNVLSANLG------------------------------QAPARQAAL 82 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~-~~~Id~vi~g~~~~~~~~------------------------------~~~a~~va~ 82 (414)
.....+|+..|+++||+|+|++ +++++...+|...+...+ ..++.+++.
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 153 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI 153 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence 3466899999999999999998 777776444443322111 124567888
Q ss_pred HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 83 ~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
.+|+ ++|+++++++|+|++.||.+|+.+|++|++|++||+|+|.+.. |.....
T Consensus 154 ~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~~~~------------------------ 206 (421)
T PTZ00050 154 KHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVSFAG------------------------ 206 (421)
T ss_pred HhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHHHHH------------------------
Confidence 8999 4899999999999999999999999999999999999998654 432211
Q ss_pred ccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhc
Q 015003 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (414)
Q Consensus 163 ~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 242 (414)
|. +. +.+... ....++..++| |+++
T Consensus 207 -----f~--------~~------------------------~~l~~~--~~~~p~~~~~p---fd~~------------- 231 (421)
T PTZ00050 207 -----FS--------RM------------------------RALCTK--YNDDPQRASRP---FDKD------------- 231 (421)
T ss_pred -----HH--------hh------------------------hccccC--cCCCCCccCCC---CcCC-------------
Confidence 00 00 000000 00012345667 7766
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHH-cC
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIAN-AG 316 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~-aG 316 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+. +........++++++|++ +|
T Consensus 232 ------~~G~~-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Ag 298 (421)
T PTZ00050 232 ------RAGFV-------MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGAN 298 (421)
T ss_pred ------CCCEe-------eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccC
Confidence 67776 799999999999999999999999999999988763 222334567899999999 99
Q ss_pred CCCCCCceeeccccchhH----H-HHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC---------
Q 015003 317 LEASQIDYYEINEAFSVV----A-IANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------- 381 (414)
Q Consensus 317 l~~~DId~~~~hd~~~~~----~-~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--------- 381 (414)
++++|||++++|.+++.. + ..+.+.+|-.. +++.++..|..+||+.+++|+..++.++++|+.+.
T Consensus 299 i~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~ 378 (421)
T PTZ00050 299 ININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLEN 378 (421)
T ss_pred CChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCC
Confidence 999999999999999832 2 33445556432 56888899999999999999999999999998641
Q ss_pred --------------------CCeeEEeecccccceeeEEEEE
Q 015003 382 --------------------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 --------------------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+..+++.||+++++||++
T Consensus 379 ~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 379 PDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 1355788899999999999985
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=234.81 Aligned_cols=272 Identities=20% Similarity=0.264 Sum_probs=208.4
Q ss_pred CHHHHHHHHHHHHHHHcCCC--ccccCeEEEEeecCCC------------CC--------------CcHHHHHHHHCCCC
Q 015003 36 SATKLGSIAIECALKRANVK--PLLVQEVFFGNVLSAN------------LG--------------QAPARQAALGAGIP 87 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~--~~~Id~vi~g~~~~~~------------~~--------------~~~a~~va~~lgl~ 87 (414)
+..+++..|+++|+++||+. ++.+ .+++|+..+.. .+ ...+.+++..+|++
T Consensus 3 ~~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~ 81 (342)
T PRK14691 3 RWWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK 81 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC
Confidence 45688999999999999974 4444 56677654331 00 12567899999994
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+.+|++|++|++||+|+|.... |..+..
T Consensus 82 --Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~~~~~----------------------------- 129 (342)
T PRK14691 82 --GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TVSLAG----------------------------- 129 (342)
T ss_pred --CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHHH-----------------------------
Confidence 899999999999999999999999999999999999998655 322110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
| .. .++.. .+ + ...++..|+| ||++
T Consensus 130 f------------------~~------~~~ls-~~---~------~~~p~~~~rP---Fd~~------------------ 154 (342)
T PRK14691 130 F------------------AA------ARALS-TH---F------NSTPEKASRP---FDTA------------------ 154 (342)
T ss_pred H------------------HH------hhhhh-cC---C------CCCCCcCCCC---CCCC------------------
Confidence 0 00 00000 00 0 0113557888 8887
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++|||+++||++++.+++++.+++++|.|++...+. +.....++.++++++|+++|++++||
T Consensus 155 -r~G~v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dI 226 (342)
T PRK14691 155 -RDGFV-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQV 226 (342)
T ss_pred -CCCcc-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 88998 799999999999999999999999999999998875 23334566899999999999999999
Q ss_pred ceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+|+.|++++.. +. .+.+.||-. .++.++..|..+||+.+++|+..++..+++|+.+
T Consensus 227 dyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~ 305 (342)
T PRK14691 227 QHLNAHATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKG 305 (342)
T ss_pred CEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccc
Confidence 999999999964 22 234445632 3577888899999999999999999888888754
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+..+++.||+++++||++.
T Consensus 306 ~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 306 LNIIAGNAQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred cCcccCCCccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 013457888999999999999874
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-27 Score=237.23 Aligned_cols=274 Identities=22% Similarity=0.271 Sum_probs=200.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcc-----ccCeEEEEeecCCC--------------------------CCCcHHHHHHHHC
Q 015003 36 SATKLGSIAIECALKRANVKPL-----LVQEVFFGNVLSAN--------------------------LGQAPARQAALGA 84 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~-----~Id~vi~g~~~~~~--------------------------~~~~~a~~va~~l 84 (414)
....|+.+|+++||+|||+++. +...+++|+..+.. .....+.+++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 4568999999999999998642 35568888654321 0112456799999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (414)
|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.... |..+..
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~~~-------------------------- 222 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-ALSIAG-------------------------- 222 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHHH--------------------------
Confidence 98 4899999999999999999999999999999999999997544 321110
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
|... +.+..+++ ..++..++| |+.+
T Consensus 223 ---~~~~-~~l~~~~~---------------------------------~~p~~~~~p---fd~~--------------- 247 (437)
T PLN02836 223 ---FSRS-RALSTKFN---------------------------------SCPTEASRP---FDCD--------------- 247 (437)
T ss_pred ---HHHh-hhhhcccC---------------------------------CCcccccCC---cccC---------------
Confidence 0000 00000000 001335666 6655
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEA 319 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~ 319 (414)
++|++ ++|||+++||++++.+++++.+++++|.|++...+.... ......++++++|+++|+++
T Consensus 248 ----~~G~~-------~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~ 316 (437)
T PLN02836 248 ----RDGFV-------IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHP 316 (437)
T ss_pred ----CCCee-------eecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCH
Confidence 56666 799999999999999999999999999999987763221 12234678999999999999
Q ss_pred CCCceeeccccchhH----H-HHHHHHcCCCC--CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------
Q 015003 320 SQIDYYEINEAFSVV----A-IANQKLLGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------- 381 (414)
Q Consensus 320 ~DId~~~~hd~~~~~----~-~~~~e~lGl~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------- 381 (414)
+|||+++.|++++.. + ..+.+.+|-.. .++.++..|..+||+.+++|+..++.++++|+.+-
T Consensus 317 ~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~ 396 (437)
T PLN02836 317 NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPD 396 (437)
T ss_pred hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCC
Confidence 999999999999842 2 22334444221 23555666778899999999999999999998751
Q ss_pred -----------------CCeeEEeecccccceeeEEEEEe
Q 015003 382 -----------------GKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 382 -----------------~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
.++.+..+++.||+++++||++.
T Consensus 397 p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 397 PIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 12356778899999999999864
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-27 Score=234.93 Aligned_cols=269 Identities=24% Similarity=0.296 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC--------------------------CCcHHHHHHHHCCCCC
Q 015003 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAGIPN 88 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~va~~lgl~~ 88 (414)
.++..++++||+|+|+++++.+ .+++|+..+... ...++.+++..+|++
T Consensus 76 ~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~- 154 (414)
T PRK08722 76 QYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR- 154 (414)
T ss_pred HHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC-
Confidence 5788999999999999765544 477777543210 012677899999994
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
+|+++++++|+|++.||..|+.+|++|++|++||+|+|.... |..+..
T Consensus 155 -Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~~------------------------------ 202 (414)
T PRK08722 155 -GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAST-PLGMAG------------------------------ 202 (414)
T ss_pred -CCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHHH------------------------------
Confidence 899999999999999999999999999999999999998765 332211
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCcc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
|. +. +.+.. ....++..|+| ||++
T Consensus 203 --------------------f~---------~~--~~ls~---~~~~p~~~~rp---fd~~------------------- 226 (414)
T PRK08722 203 --------------------FG---------AA--KALST---RNDEPQKASRP---WDKD------------------- 226 (414)
T ss_pred --------------------HH---------Hc--CCccc---CCCCCccccCc---CcCC-------------------
Confidence 00 00 00000 00012456788 7777
Q ss_pred CCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCCCc
Q 015003 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
++|++ ++||++++||++++.+++++.+++++|.|++...+.. +.......++++++|+++|++++|||
T Consensus 227 ~~G~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did 299 (414)
T PRK08722 227 RDGFV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIG 299 (414)
T ss_pred CCceE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcC
Confidence 78888 7999999999999999999999999999999887632 22223357899999999999999999
Q ss_pred eeeccccchhH----HHH-HHHHcCCC-CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 324 YYEINEAFSVV----AIA-NQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 324 ~~~~hd~~~~~----~~~-~~e~lGl~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
+++.|.+++.. +.. +.+.||-. .+++.++.-|..+||+.+++|+..++.++++|+.+
T Consensus 300 ~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~ 379 (414)
T PRK08722 300 YVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDI 379 (414)
T ss_pred EEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 99999998853 222 34445633 34677888899999999999999999999999865
Q ss_pred -----------CCCeeEEeecccccceeeEEEEE
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+..+++.||+++++||++
T Consensus 380 ~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 380 DLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred ccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 02345677789999999999985
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=229.44 Aligned_cols=260 Identities=27% Similarity=0.311 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHHHHcCCCc--cccCeEEEEeecCCC-----------------------------CCCcHHHHHHHHCCC
Q 015003 38 TKLGSIAIECALKRANVKP--LLVQEVFFGNVLSAN-----------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~--~~Id~vi~g~~~~~~-----------------------------~~~~~a~~va~~lgl 86 (414)
..++..|+++||+|+|+++ +++ .+++|+..+.. ....++.+++..+|+
T Consensus 57 ~~~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~ 135 (381)
T PRK05952 57 EDLTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT 135 (381)
T ss_pred cHHHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC
Confidence 3477789999999999964 222 46777643310 011256778999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|++++.++|+|++.||..|+.+|++|++|++||+|+|.... |..+..
T Consensus 136 ~--Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~~~---------------------------- 184 (381)
T PRK05952 136 Q--GPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PLTLAG---------------------------- 184 (381)
T ss_pred C--CccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHHH----------------------------
Confidence 4 899999999999999999999999999999999999997443 322210
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+. .. +.+ +...|+| ||++
T Consensus 185 ----------------------~~---------~~--~~l---------s~~~~rP---fd~~----------------- 202 (381)
T PRK05952 185 ----------------------FQ---------QM--GAL---------AKTGAYP---FDRQ----------------- 202 (381)
T ss_pred ----------------------HH---------hc--CCc---------CCCCCCC---CCCC-----------------
Confidence 00 00 001 1124667 7777
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++||++++||++++.+++++.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 203 --r~G~v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~d 273 (381)
T PRK05952 203 --REGLV-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPED 273 (381)
T ss_pred --CCCcc-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHH
Confidence 77888 7999999999999999999999999999999887632 222335678999999999999999
Q ss_pred CceeeccccchhH----HHHHH-HHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFSVV----AIANQ-KLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~~~----~~~~~-e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||+++.|...+.. +...+ +.+| +++++++.|..+||+.+++|+..++.++++|+.+
T Consensus 274 Id~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 350 (381)
T PRK05952 274 IDYIHAHGTATRLNDQREANLIQALFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLN 350 (381)
T ss_pred eeEEEccCCCCCCCcHHHHHHHHHHcC---CCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCC
Confidence 9999999877642 22223 3344 4688899999999999999999999999999864
Q ss_pred --------CCCeeEEeecccccceeeEEEEE
Q 015003 381 --------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 --------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+..+++.||+++++||++
T Consensus 351 ~v~~~~~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 351 FVRQAQQSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred cCCCcccCCCCEEEEeeecCCCeeEEEEEeC
Confidence 12456788899999999999974
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=236.63 Aligned_cols=266 Identities=25% Similarity=0.311 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------CCcHHHHHHHHCCCCCCccee
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL-------------------GQAPARQAALGAGIPNSVVCT 93 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~-------------------~~~~a~~va~~lgl~~~~~~~ 93 (414)
...|+.+|+++||+|||+++.+|| .+++|+..+++. .+..+..++..+|++ ++++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 345999999999999999999999 788887654331 233567799999994 7999
Q ss_pred eEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHH
Q 015003 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (414)
Q Consensus 94 ~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (414)
+++.+|+|++.||..|..+|++|++|+|||+|+|.+.. +.....
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~~~~----------------------------------- 208 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILS-PDTFVG----------------------------------- 208 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCC-HHHHHH-----------------------------------
Confidence 99999999999999999999999999999999998654 221100
Q ss_pred HHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcc
Q 015003 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (414)
Q Consensus 174 ~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 253 (414)
+. .. +.+. ++..++| |+.+ ++|.+
T Consensus 209 ---------------~~---------~~--~~l~--------~~~~~~p---f~~~-------------------~~g~~ 232 (424)
T smart00825 209 ---------------FS---------RA--GMLS--------PDGRCKT---FDAD-------------------ADGYV 232 (424)
T ss_pred ---------------Hh---------hc--CCCC--------CCCCCCC---CCCC-------------------CCccc
Confidence 00 00 0000 1223445 4444 45555
Q ss_pred ccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCCCCceeecc
Q 015003 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEIN 328 (414)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~h 328 (414)
++|||+++||++.+.+++++.+++++|.|++...+.... .......+++++|+++|++++|||+++.|
T Consensus 233 -------~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 233 -------RGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred -------ccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEee
Confidence 899999999999999999999999999999988764321 11234689999999999999999999999
Q ss_pred ccchhH----H-HHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-------------------
Q 015003 329 EAFSVV----A-IANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------- 381 (414)
Q Consensus 329 d~~~~~----~-~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~------------------- 381 (414)
.+++.. + ..+.+.+|... .++.+++-|..+||+.+++|+.++++++++|+.+-
T Consensus 306 ~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~ 385 (424)
T smart00825 306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEES 385 (424)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccC
Confidence 777642 1 22344555432 34666777777899999999999999999998750
Q ss_pred ----------------CCeeEEeecccccceeeEEEEE
Q 015003 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 ----------------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+.+.++.||.++++||+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 386 PLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred ceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 2345677788899999999974
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=231.57 Aligned_cols=270 Identities=28% Similarity=0.364 Sum_probs=202.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
...+|+.+|+++||+|+|++++++|. +++|+..+.. ..+..+.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 55689999999999999999888775 5555443321 11346778999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ ++.++++.+|+|++.||..|+.+|++|++|++||+|+|..+. |..+..-
T Consensus 150 l~--g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p~~~~~~-------------------------- 200 (406)
T cd00834 150 LR--GPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-PLTLAGF-------------------------- 200 (406)
T ss_pred CC--CcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-HHHHHHH--------------------------
Confidence 94 799999999999999999999999999999999999998775 4322110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
. .. +.+.+. ...+...++| |+.+
T Consensus 201 ---~--------~~------------------------~~l~~~---~~~p~~~~~p---f~~~---------------- 223 (406)
T cd00834 201 ---A--------AL------------------------RALSTR---NDDPEKASRP---FDKD---------------- 223 (406)
T ss_pred ---H--------hc------------------------CCcCCC---CCCCccCCCC---CCCC----------------
Confidence 0 00 000000 0001223445 4444
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++
T Consensus 224 ---~~g~~-------~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~ 293 (406)
T cd00834 224 ---RDGFV-------LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPE 293 (406)
T ss_pred ---CCCEe-------eeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHH
Confidence 45555 89999999999999999999999999999998765322 1234557899999999999999
Q ss_pred CCceeeccccchhH----HHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 321 QIDYYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 321 DId~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
|||+++.|...+.. +.. +.+.++-.+++++++..|..+||+.+++|+..++.++++|+.+
T Consensus 294 dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 373 (406)
T cd00834 294 DIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPEC 373 (406)
T ss_pred HCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 99999999888742 222 2344554445788888899999999999999999999999865
Q ss_pred ------------CCCeeEEeecccccceeeEEE
Q 015003 381 ------------KGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl 401 (414)
..++.+.++++.||.++++||
T Consensus 374 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 374 DLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 123567778899999999885
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-26 Score=233.95 Aligned_cols=269 Identities=19% Similarity=0.240 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHcCCCcc---ccC----eEEEEeecCCCC-------------------------CCcHHHHHHHHCCC
Q 015003 39 KLGSIAIECALKRANVKPL---LVQ----EVFFGNVLSANL-------------------------GQAPARQAALGAGI 86 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~---~Id----~vi~g~~~~~~~-------------------------~~~~a~~va~~lgl 86 (414)
.++..|+++||+|+|++++ +++ .+++|+..+... ....+.+++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 4778899999999999764 232 577777643210 01245678899999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
. +|.++++++|+|++.||..|+++|++|++|++||+|+|.... |..+..
T Consensus 281 ~--Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~~~~---------------------------- 329 (540)
T PLN02787 281 M--GPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIGLGG---------------------------- 329 (540)
T ss_pred C--CCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHHHHH----------------------------
Confidence 4 899999999999999999999999999999999999997654 432211
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
|.. . ++ +.+. ...++..++| ||++
T Consensus 330 -f~~------------------~------~a--------LS~~---~~~p~~~~rP---FD~~----------------- 353 (540)
T PLN02787 330 -FVA------------------C------RA--------LSQR---NDDPTKASRP---WDMN----------------- 353 (540)
T ss_pred -HHH------------------H------HH--------hhcc---CCCcccccCC---cccC-----------------
Confidence 000 0 00 0000 0012456788 7877
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.|+++|.+++++|.|++...|... ..+.+...+++++|+++|++++|
T Consensus 354 --rdGfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~d 424 (540)
T PLN02787 354 --RDGFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKED 424 (540)
T ss_pred --CCCcc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHH
Confidence 88888 79999999999999999999999999999998876432 22234578999999999999999
Q ss_pred CceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||||+.|-..+.. +. .+.+.||-. .++.++..|..+||+.||+|+..++.++.+|+.+
T Consensus 425 IdyInaHGTGT~~gD~~E~~Ai~~~Fg~~-~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~ 503 (540)
T PLN02787 425 VNYINAHATSTKAGDLKEYQALMRCFGQN-PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVD 503 (540)
T ss_pred CcEEEccCccCCCCCHHHHHHHHHHhCCC-CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCC
Confidence 9999999887643 33 234456632 3467777899999999999999999999999854
Q ss_pred ------------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 ------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.|.++++.||+++++||+..
T Consensus 504 ~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 504 TKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred cccccccccccCCcCEEEEeeecCCceeEEEEEEeC
Confidence 113457788999999999999864
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-26 Score=226.06 Aligned_cols=274 Identities=27% Similarity=0.336 Sum_probs=213.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-ccccC---eEEEEeecCCCCCC---------------------------cHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVK-PLLVQ---EVFFGNVLSANLGQ---------------------------APARQAALG 83 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~-~~~Id---~vi~g~~~~~~~~~---------------------------~~a~~va~~ 83 (414)
.+...|+..|+.+|++|+|++ ..+.+ .+++|+..+..... ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 478899999999999999997 44443 35566555432100 157789999
Q ss_pred CCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccc
Q 015003 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (414)
Q Consensus 84 lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (414)
+|++ ++.+++.++|+++.++|..|.++|+.|++|++|++|+|..-. +..+.
T Consensus 149 ~g~~--G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~-~~~i~-------------------------- 199 (412)
T COG0304 149 FGLK--GPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAIT-PLGIA-------------------------- 199 (412)
T ss_pred hCCC--CCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccC-HHHHH--------------------------
Confidence 9995 899999999999999999999999999999999999988443 22111
Q ss_pred cCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcC
Q 015003 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (414)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 243 (414)
.|. +..+... . ...+.+.++| |+++
T Consensus 200 ------------------------gF~------am~Alst---~-----nd~p~~asrP---fd~~-------------- 224 (412)
T COG0304 200 ------------------------GFE------AMRALST---R-----NDDPEKASRP---FDKN-------------- 224 (412)
T ss_pred ------------------------HHH------HHHHhcc---C-----CCCccccCCC---CCCC--------------
Confidence 110 0000000 0 0123567888 8888
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCC
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLE 318 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~ 318 (414)
++|.+ +++|++++||++.+.|+++|+++|++|.|++...|. |.+.+.+..+++++||+.+|++
T Consensus 225 -----RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~ 292 (412)
T COG0304 225 -----RDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292 (412)
T ss_pred -----CCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCC
Confidence 89999 899999999999999999999999999999998873 4444667789999999999999
Q ss_pred CCCCceeeccccchh----HHHHHHH-HcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-------------
Q 015003 319 ASQIDYYEINEAFSV----VAIANQK-LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK------------- 380 (414)
Q Consensus 319 ~~DId~~~~hd~~~~----~~~~~~e-~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~------------- 380 (414)
++||||+..|...+. .+...++ .||-...++.+++.|..+||+.|++|...++..++.|+.+
T Consensus 293 ~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp 372 (412)
T COG0304 293 PEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDP 372 (412)
T ss_pred HhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCc
Confidence 999999999988773 3444444 4565555678899999999999999999999999999854
Q ss_pred ---------------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 ---------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 ---------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..+..+.++++.||+++++++++.
T Consensus 373 ~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 373 EAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred ccccccccCCcccccceeEEEecccccCCcceEEEEecC
Confidence 022346777899999999999875
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-26 Score=228.41 Aligned_cols=270 Identities=24% Similarity=0.271 Sum_probs=203.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cCe----EEEEeecCCC----------------------CC--CcHHHHHHHHCCC
Q 015003 36 SATKLGSIAIECALKRANVKPLL-VQE----VFFGNVLSAN----------------------LG--QAPARQAALGAGI 86 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~-Id~----vi~g~~~~~~----------------------~~--~~~a~~va~~lgl 86 (414)
....|+.+|+++||+|||+++++ ++. +++|+..+.+ .. ..++.+++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 56789999999999999998877 553 5555542211 11 4567789999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
. .+|+++++++|+|+++||..|+++|++|++|++||+|+|.++ |.....
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~~~---------------------------- 199 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGLSG---------------------------- 199 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHHHH----------------------------
Confidence 4 389999999999999999999999999999999999999976 322211
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
|.. .+.+..+ ...+...++| |+++
T Consensus 200 -f~~--------------------------------~~~ls~~---~~~~~~~~~p---fd~~----------------- 223 (407)
T cd00828 200 -FAN--------------------------------MGALSTA---EEEPEEMSRP---FDET----------------- 223 (407)
T ss_pred -HHH--------------------------------cCCCCCC---CCCCCcccCC---CcCC-----------------
Confidence 000 0000100 0001235566 5555
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc----ccchHHHHHHHHHHcCCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----TTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+..... .....++++++|+++|++++||
T Consensus 224 --~~G~~-------~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dI 294 (407)
T cd00828 224 --RDGFV-------EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDL 294 (407)
T ss_pred --CCcEE-------eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 56666 7999999999999999999999999999999887643322 2456789999999999999999
Q ss_pred ceeeccccchhH----HHHHHH-HcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------
Q 015003 323 DYYEINEAFSVV----AIANQK-LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~----~~~~~e-~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------- 381 (414)
|+++.|.+++.. +...++ .++-..+++.++..|..+||+.+++|+..++.++++|+.+-
T Consensus 295 d~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 374 (407)
T cd00828 295 DVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEH 374 (407)
T ss_pred CEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccc
Confidence 999999988843 333333 34433345677788999999999999999999999998640
Q ss_pred -------------CCeeEEeecccccceeeEEE
Q 015003 382 -------------GKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 382 -------------~~~~l~~~~~~gg~~~a~vl 401 (414)
.++.+..+++.||+++++||
T Consensus 375 ~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 375 LSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 14567888899999999875
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=226.99 Aligned_cols=273 Identities=23% Similarity=0.181 Sum_probs=196.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCc---cccCeEEEEeecC----------------CCCC---------CcHHHHHHHHCCCC
Q 015003 36 SATKLGSIAIECALKRANVKP---LLVQEVFFGNVLS----------------ANLG---------QAPARQAALGAGIP 87 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~---~~Id~vi~g~~~~----------------~~~~---------~~~a~~va~~lgl~ 87 (414)
...+|+..|+++||+|+|+++ ++|. +++|+... .... ...+.+++..+|++
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riG-vivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIG-LVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR 157 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEE-EEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC
Confidence 466799999999999999863 3343 44443321 0001 12556788999994
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+.+|++|++|++||+|+|.... |..... +
T Consensus 158 --G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~~~~~--------------------~-------- 206 (410)
T PRK07103 158 --GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YWECQA--------------------L-------- 206 (410)
T ss_pred --CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHHHHH--------------------H--------
Confidence 799999999999999999999999999999999999975332 221110 0
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
...+. .....+ ...+...++| |+++
T Consensus 207 ---------~~~~~-------------------l~~~~~------~~~p~~~~rP---fd~~------------------ 231 (410)
T PRK07103 207 ---------RSLGA-------------------MGSDRF------ADEPEAACRP---FDQD------------------ 231 (410)
T ss_pred ---------HHccc-------------------cccCcc------CCCcccCcCC---CCCC------------------
Confidence 00000 000000 0112345566 6666
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc---cccchHHHHHHHHHHcCCCCCCCce
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQIDY 324 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~aGl~~~DId~ 324 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.... ...+..++++++|+++|++++|||+
T Consensus 232 -~dG~v-------~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~ 303 (410)
T PRK07103 232 -RDGFI-------YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDY 303 (410)
T ss_pred -CCCee-------EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 66776 899999999999999999999999999999988764322 1223468999999999999999999
Q ss_pred eeccccchhH-HHHHHHH-cCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC---------------------
Q 015003 325 YEINEAFSVV-AIANQKL-LGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------------- 381 (414)
Q Consensus 325 ~~~hd~~~~~-~~~~~e~-lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--------------------- 381 (414)
++.|.+++.. .....+. ++....++.++..|..+||+.+++|+..++.++++|+.+.
T Consensus 304 v~~hgtgt~~~D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~ 383 (410)
T PRK07103 304 VNPHGTGSPLGDETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGST 383 (410)
T ss_pred EEccCCCCCCCCHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCC
Confidence 9999999964 1222223 3333334566666778899999999999999999998641
Q ss_pred -----CCeeEEeecccccceeeEEEEE
Q 015003 382 -----GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 -----~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+..+++.||+++++||++
T Consensus 384 ~~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 384 AESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CcCCCCCEEEEecccCCCceEEEEEeC
Confidence 2456788899999999999974
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=223.60 Aligned_cols=267 Identities=23% Similarity=0.279 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHHcCCC---ccccCeEEEEeecCCC--------------------------CCCcHHHHHHHHCCCCC
Q 015003 38 TKLGSIAIECALKRANVK---PLLVQEVFFGNVLSAN--------------------------LGQAPARQAALGAGIPN 88 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~---~~~Id~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl~~ 88 (414)
..|+..++++||+|||++ ++.+ .+++|+..+.. .....+.+++..++++
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~- 161 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK- 161 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC-
Confidence 347888999999999973 3333 35666654321 0112556788888884
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
+|++++.++|+|++.||.+|+++|++|++|.+||+|+|.... |..+..
T Consensus 162 -G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~-~~~~~~------------------------------ 209 (418)
T PRK07910 162 -AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIE-AVPIAG------------------------------ 209 (418)
T ss_pred -CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHHHHH------------------------------
Confidence 899999999999999999999999999999999999998765 332211
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCC-cccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGL-FAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~-~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+.+. +. +.. ....++..|+| ||++
T Consensus 210 -------f~~~------------------------~~~ls~---~~~~~~~~~rP---Fd~~------------------ 234 (418)
T PRK07910 210 -------FAQM------------------------RIVMST---NNDDPAGACRP---FDKD------------------ 234 (418)
T ss_pred -------HHhc------------------------CCcccc---CCCCCCCCcCC---CcCC------------------
Confidence 0000 00 000 00113556888 7777
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++||++++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++||
T Consensus 235 -~~G~v-------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~di 306 (418)
T PRK07910 235 -RDGFV-------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDI 306 (418)
T ss_pred -CCCEe-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHC
Confidence 78888 79999999999999999999999999999999876432 223345789999999999999999
Q ss_pred ceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+++.|.+.+.. +. .+.+.||-. .+.++..|..+||+.|++|+..++..+.+|+.+
T Consensus 307 d~ie~hgtgt~~~D~~E~~Al~~~fg~~--~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l 384 (418)
T PRK07910 307 DHVNAHATGTSVGDVAEGKAINNALGGH--RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDL 384 (418)
T ss_pred CEEEcCCcCCCCCCHHHHHHHHHHhCCC--CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 999999998842 33 334456632 334667799999999999999999999999864
Q ss_pred ----------CCCeeEEeecccccceeeEEEEE
Q 015003 381 ----------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 ----------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+..+++.||+++++||++
T Consensus 385 ~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 385 DVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred ccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 11346788899999999999985
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=215.67 Aligned_cols=272 Identities=25% Similarity=0.343 Sum_probs=209.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcc---ccCe----EEEEeecCCCC-----------------CC---------cHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPL---LVQE----VFFGNVLSANL-----------------GQ---------APARQAAL 82 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~---~Id~----vi~g~~~~~~~-----------------~~---------~~a~~va~ 82 (414)
++..|++.|+.+||+|+++.+. +.|. |.+|+.+++.. .| ..+.+++.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4667999999999999998654 4454 44554443310 00 15678999
Q ss_pred HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 83 ~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
++|+. +|...++++|+++..+|..|.++|+.|.+|++|++|.|..-. |..+.. |
T Consensus 173 ~~gl~--GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-PlslaG--------------------F--- 226 (440)
T KOG1394|consen 173 KYGLR--GPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PLSLAG--------------------F--- 226 (440)
T ss_pred hhcCc--CCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-chhhhh--------------------H---
Confidence 99994 899999999999999999999999999999999999999877 654422 1
Q ss_pred ccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhc
Q 015003 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (414)
Q Consensus 163 ~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 242 (414)
++.||..--+ ..+...+|| ||++
T Consensus 227 ------------------------------~r~RALSt~n-----------d~P~~aSRP---fD~~------------- 249 (440)
T KOG1394|consen 227 ------------------------------SRARALSTRN-----------DNPQKASRP---FDKK------------- 249 (440)
T ss_pred ------------------------------HHHHHhhhcC-----------CCccccCCC---CccC-------------
Confidence 1111111101 112457788 8888
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeec-----CCCccccchHHHHHHHHHHcCC
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ-----APEWFTTAPSLAIPKAIANAGL 317 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~aGl 317 (414)
++|.+ ++||++.+||++.|.|++++++++++++|++...| .|+..+.+...+++++|+.||+
T Consensus 250 ------RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl 316 (440)
T KOG1394|consen 250 ------RDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGL 316 (440)
T ss_pred ------CCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCC
Confidence 88999 89999999999999999999999999999999877 3566677889999999999999
Q ss_pred CCCCCceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc------------
Q 015003 318 EASQIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK------------ 380 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~------------ 380 (414)
.|+||||+..|..++.. ...+...|+--.....++..|-.+||.+||+|....+.-+..++.+
T Consensus 317 ~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d 396 (440)
T KOG1394|consen 317 SPEDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPD 396 (440)
T ss_pred ChhhcCeeecccccCcCchHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCC
Confidence 99999999999888753 2223333443333445778899999999999999888777777643
Q ss_pred -------------------CCCeeEEeecccccceeeEEEEE
Q 015003 381 -------------------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 -------------------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..+..+..+++.||+++++++..
T Consensus 397 ~~~d~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~ 438 (440)
T KOG1394|consen 397 PGVDLDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAK 438 (440)
T ss_pred ccccccccccccccccccccceEEEecccccCCcchhheeee
Confidence 12346778889999999999864
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-25 Score=220.03 Aligned_cols=269 Identities=24% Similarity=0.281 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
..+|+..|+++||+|+|+++.+++. +++|+..... .....+..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4678999999999999999888875 4444322110 011366788999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|++++.++|+|++.||.+|+.+|++|++|++||+|+|.... |..+..
T Consensus 152 ~--Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~~~~~---------------------------- 200 (406)
T PRK08439 152 K--GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PVGIGG---------------------------- 200 (406)
T ss_pred C--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HHHHHH----------------------------
Confidence 5 799999999999999999999999999999999999998654 322210
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+. .. +.++. ....++..|+| ||++
T Consensus 201 ----------------------f~---------~~--~~ls~---~~~~p~~~~rp---fd~~----------------- 224 (406)
T PRK08439 201 ----------------------FA---------AM--KALST---RNDDPKKASRP---FDKD----------------- 224 (406)
T ss_pred ----------------------HH---------Hh--Ccccc---CCCCCccCcCC---ccCC-----------------
Confidence 00 00 00100 00112446777 7776
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc---ccchHHHHHHHHHHcCCCCCCCc
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~aGl~~~DId 323 (414)
++|.+ ++||++++||++.+.|++++.++++.|.|++...+..... ..+..++++++|+.+|+ +|||
T Consensus 225 --~~G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~ 293 (406)
T PRK08439 225 --RDGFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKID 293 (406)
T ss_pred --CCcEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccC
Confidence 77888 7999999999999999999999999999998876532221 13456899999999998 8999
Q ss_pred eeeccccchhH----HHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc------------------
Q 015003 324 YYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK------------------ 380 (414)
Q Consensus 324 ~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~------------------ 380 (414)
|++.|-..+.. +.. +.+.+|-...++.++.-|..+||+.+++|+..++..+.+|+.+
T Consensus 294 ~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 373 (406)
T PRK08439 294 YINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLD 373 (406)
T ss_pred EEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcc
Confidence 99999877642 333 3444554333445667788899999999999999999999865
Q ss_pred ---------CCCeeEEeecccccceeeEEEEE
Q 015003 381 ---------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 ---------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+..+++.||+++++||+.
T Consensus 374 ~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 374 YIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred cCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 11345678899999999999975
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=222.50 Aligned_cols=273 Identities=22% Similarity=0.227 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe------------------EEEEeecC---------------CC-------CCCcH
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE------------------VFFGNVLS---------------AN-------LGQAP 76 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~------------------vi~g~~~~---------------~~-------~~~~~ 76 (414)
...|+..|+++||+|||+++.+++. ++.++... .. ..+..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 4568899999999999996443221 11111100 00 12246
Q ss_pred HHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccc
Q 015003 77 ARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK 156 (414)
Q Consensus 77 a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
+.+++..+|++ +++++++++|+|++.||.+|+.+|++|++|++||+|+|.... |..+..
T Consensus 155 a~~i~~~~gl~--G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~~~~~~------------------ 213 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-AEALIR------------------ 213 (425)
T ss_pred HHHHHHHhCCC--CCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH------------------
Confidence 77899999994 799999999999999999999999999999999999996433 221110
Q ss_pred ccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccC
Q 015003 157 DGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD 236 (414)
Q Consensus 157 ~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~ 236 (414)
+... ..+.. ....++..++| |+++
T Consensus 214 --------------------------------~~~~-----------~~ls~---~~~~~~~~~rp---fd~~------- 237 (425)
T PRK06501 214 --------------------------------FSLL-----------SALST---QNDPPEKASKP---FSKD------- 237 (425)
T ss_pred --------------------------------HHHh-----------hcccc---CCCCCCcccCC---CCCC-------
Confidence 0000 00000 00112445677 7776
Q ss_pred HHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHH
Q 015003 237 AAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKA 311 (414)
Q Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~a 311 (414)
++|.+ ++||++++||++.+.+++++.++++.|.|++...+.... ......++++++
T Consensus 238 ------------r~G~v-------~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~A 298 (425)
T PRK06501 238 ------------RDGFV-------MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAA 298 (425)
T ss_pred ------------CCCee-------eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHH
Confidence 67776 799999999999999999999999999999887653221 122456899999
Q ss_pred HHHcCCCCCCCceeeccccchhHH----H-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----
Q 015003 312 IANAGLEASQIDYYEINEAFSVVA----I-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----- 381 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~----~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----- 381 (414)
|+++|++++|||+++.|..++... . .+.+.+|-...++.++..|..+||+.+++|+..++..+++|+.+.
T Consensus 299 L~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~ 378 (425)
T PRK06501 299 LADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTI 378 (425)
T ss_pred HHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcC
Confidence 999999999999999999987541 1 223334432234555566777899999999999999999998651
Q ss_pred ----------------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ----------------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ----------------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+.++++.||+++++||+...
T Consensus 379 n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 379 NYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 123456778999999999999764
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=218.80 Aligned_cols=266 Identities=21% Similarity=0.301 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCC-----------------CC--------C-cHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN-----------------LG--------Q-APARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~-~~Id----~vi~g~~~~~~-----------------~~--------~-~~a~~va~~lg 85 (414)
...|+..|+++||+|||++. ..++ .+++|+..+.. .. + ..+.+++..++
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 34688999999999999843 2222 56777644321 00 1 15667899999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|+++||..|+.+|++|++|++||+|+|..+. .....
T Consensus 153 ~~--Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~--~~~~~--------------------------- 201 (405)
T PRK09116 153 LK--GRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCP--TEAAV--------------------------- 201 (405)
T ss_pred CC--CCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcCh--HHHHH---------------------------
Confidence 94 899999999999999999999999999999999999997532 11100
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
|.. + ++ . .. ....++..++| |+++
T Consensus 202 --f~~------------------l------~~---~-----~~---~~~~~~~~~rP---fd~~---------------- 225 (405)
T PRK09116 202 --FDT------------------L------FA---T-----ST---RNDAPELTPRP---FDAN---------------- 225 (405)
T ss_pred --HHH------------------h------hh---h-----cc---CCCCCCCCCCC---CcCC----------------
Confidence 000 0 00 0 00 00112446777 7777
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc---ccchHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++||++++||++.+.++++|.+++++|.|++...+..... .....++++++|+++|++++||
T Consensus 226 ---~~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dI 295 (405)
T PRK09116 226 ---RDGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDI 295 (405)
T ss_pred ---CCCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHc
Confidence 88888 7999999999999999999999999999999887643221 2344689999999999999999
Q ss_pred ceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+|+.|.+.+.. ...+.+.+| +++.++..|..+||+.+++|+..++..+.+|+.+
T Consensus 296 d~I~~Hgtgt~~~D~~E~~Ai~~~fg---~~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~ 372 (405)
T PRK09116 296 GYVNAHGTATDRGDIAESQATAAVFG---ARMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGA 372 (405)
T ss_pred CEEECcCccCCCCCHHHHHHHHHHhC---CCCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcc
Confidence 999999888732 233344555 2456777899999999999999999999998864
Q ss_pred -----------CCCeeEEeecccccceeeEEEE
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
..++.+..+++.||+++++||+
T Consensus 373 l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 373 LDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred cCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 1134578889999999999984
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=218.51 Aligned_cols=266 Identities=24% Similarity=0.242 Sum_probs=202.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC------------C--------------CcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL------------G--------------QAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~------------~--------------~~~a~~va~~lg 85 (414)
....|+..|+++||+|+|+++++++ .+++|+..+.+. + ...+.+++..+|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 3457899999999999999876654 467776543210 0 124567899999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||.+|+++|++|+ |.+||+|+|.... |..+..-
T Consensus 150 l~--Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p~~~~~~-------------------------- 199 (399)
T cd00832 150 MR--GPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-PWGWVAQ-------------------------- 199 (399)
T ss_pred CC--CCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-HHHHHHH--------------------------
Confidence 94 8999999999999999999999999999 9999999998665 4332110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
.+ .+.++ ....+...|+| ||++
T Consensus 200 -----------~~------------------------~~~ls----~~~~p~~~~rP---Fd~~---------------- 221 (399)
T cd00832 200 -----------LS------------------------SGRLS----TSDDPARAYLP---FDAA---------------- 221 (399)
T ss_pred -----------Hh------------------------ccccC----CCCCCCCCcCC---CcCC----------------
Confidence 00 00111 11112456788 7777
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc--cccchHHHHHHHHHHcCCCCCCCc
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--FTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~--~~~~~~~a~~~al~~aGl~~~DId 323 (414)
++|.+ ++||++++||++.+.+++++.++++.|.|++...+.... ...+..++++++|+++|++++|||
T Consensus 222 ---~~G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~ 291 (399)
T cd00832 222 ---AAGYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVD 291 (399)
T ss_pred ---CCCEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcc
Confidence 78888 799999999999999999999999999999998764321 233557899999999999999999
Q ss_pred eeeccccchh----HHHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc------------------
Q 015003 324 YYEINEAFSV----VAIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK------------------ 380 (414)
Q Consensus 324 ~~~~hd~~~~----~~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~------------------ 380 (414)
+++.|-+.+. .+.. +.+.||- .++.++..|..+||+.+++|+..++.++++|+.+
T Consensus 292 ~v~~hgtgt~~~D~~E~~al~~~fg~--~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~ 369 (399)
T cd00832 292 VVFADAAGVPELDRAEAAALAAVFGP--RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLD 369 (399)
T ss_pred EEEeccCcCCCCCHHHHHHHHHHhCC--CCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcc
Confidence 9999977764 2333 3344553 3456777789999999999999999999998864
Q ss_pred ---------CCCeeEEeecccccceeeEEE
Q 015003 381 ---------KGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 381 ---------~~~~~l~~~~~~gg~~~a~vl 401 (414)
..++.+..+++.||+++++||
T Consensus 370 ~v~~~~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 370 LVTGRPRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred cCCCcccCCCCCEEEEeccCCCCcceEEEC
Confidence 124567888999999999885
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=217.15 Aligned_cols=250 Identities=19% Similarity=0.156 Sum_probs=191.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCC-CcceeeEccCCchHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPN-SVVCTTINKVCSSGMKAVMLAAQS 112 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~-~~~~~~v~~aC~s~~~al~~A~~~ 112 (414)
+.+..+|+.+|+++||+++|++++|||.+++++.+++...|..+..++..||+++ .+++++++.+|++++.||..|..+
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~ 128 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYA 128 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988877667888999999999975 368999999999999999999999
Q ss_pred HHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHH
Q 015003 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (414)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~ 192 (414)
|++|.++.|||+++|..+.. ...
T Consensus 129 l~~g~~~~~Lvv~~e~~s~~-~~~-------------------------------------------------------- 151 (329)
T PRK07204 129 IECGRYKRVLIISSEISSVG-LNW-------------------------------------------------------- 151 (329)
T ss_pred HHCCCCCEEEEEEeccccCC-CCc--------------------------------------------------------
Confidence 99999999999999997641 000
Q ss_pred hHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeC
Q 015003 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (414)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s 272 (414)
.+ . .++.+ +||||+|+||+.
T Consensus 152 --------------~~--------------------~-------------------~~~~l-------fGDGAaA~ll~~ 171 (329)
T PRK07204 152 --------------GQ--------------------N-------------------ESCIL-------FGDGAAAVVITK 171 (329)
T ss_pred --------------cc--------------------C-------------------cceEE-------EecccEEEEEEE
Confidence 00 0 11122 799999999997
Q ss_pred HHHHHHc-CC--------cceEEEEEEEEeecC-----CC--c----cc---------cchHHHHHHHHHHcCCCCCCCc
Q 015003 273 GVKALEL-GL--------QVIAKIRGFADAAQA-----PE--W----FT---------TAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 273 ~~~a~~~-~~--------~~~~~i~g~~~~~~~-----~~--~----~~---------~~~~~a~~~al~~aGl~~~DId 323 (414)
++...+. +. ..+..+.+.+...+. .. . +. ....++++++|+++|++++|||
T Consensus 172 ~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did 251 (329)
T PRK07204 172 GDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADID 251 (329)
T ss_pred cCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 5421100 00 001122222211000 00 0 00 0124789999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
+|.+|+.+......+.+.||++++++.. ....+||+..++-...+.+++++-+.+++++.+...+|.|-++.+++|+
T Consensus 252 ~~~~H~~~~~~~~~i~~~l~l~~e~~~~--~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 252 LIVPHQASGPAMRLIRKKLGVDEERFVT--IFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred EEEeCCCCHHHHHHHHHHcCCCHHHhhh--hHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEe
Confidence 9999999999999999999999887653 3677899999998888888876655567888888888888888999887
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=213.96 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=195.1
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
.+++.++.-..++++..+|+.+|+++||+++|+++++||.+++++..+++..|..+..++..||++++.+.+++..+|++
T Consensus 35 ~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g 114 (345)
T TIGR00748 35 GLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKA 114 (345)
T ss_pred ccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHHhHHH
Confidence 34455554445678999999999999999999999999999999888777667788899999999766889999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
+..+|..|..+|++|.++++||+++|.++..|..
T Consensus 115 ~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~~~~---------------------------------------------- 148 (345)
T TIGR00748 115 GTAGIQACMGLVASGMIKYGLAIGADTAQGAPGD---------------------------------------------- 148 (345)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEeecccCCCc----------------------------------------------
Confidence 9999999999999999999999999987531100
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
. + . +. +
T Consensus 149 ------------------------------~-------------~----------------------~--~~-------~ 154 (345)
T TIGR00748 149 ------------------------------A-------------L----------------------E--YT-------A 154 (345)
T ss_pred ------------------------------c-------------C----------------------c--cc-------C
Confidence 0 0 0 11 5
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEE-EeecC-----------C---Cc------cccchHHHHHHHHHHcCCCCC
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA-----------P---EW------FTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~-~~~~~-----------~---~~------~~~~~~~a~~~al~~aGl~~~ 320 (414)
||||+|+||+..+.. ..+.+.. ...+. + .. .......+++++|+++|++++
T Consensus 155 GDGAaA~vl~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~ 226 (345)
T TIGR00748 155 GAGGAAYIIGEKNTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPE 226 (345)
T ss_pred CCceEEEEEccCCcc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999999999854311 1111110 00000 0 00 001123788899999999999
Q ss_pred CCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEE
Q 015003 321 QIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400 (414)
Q Consensus 321 DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~v 400 (414)
|||++.+|+++..+...+.+.||++++++..+-....+||+..+|-.+.+.+++.+ .+.|++.+...+++|-++.+++
T Consensus 227 did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~--~~~Gd~vll~~~G~G~s~~~~~ 304 (345)
T TIGR00748 227 DFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI--AEPGDRILAVSYGSGAGSDAFS 304 (345)
T ss_pred HcCEEEeCCCChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh--cCCCCEEEEEEecCCcceeEEE
Confidence 99999999999999999999999998876553112468999999999988888763 4567888888888888889999
Q ss_pred EEEecc
Q 015003 401 LELMQA 406 (414)
Q Consensus 401 l~~~~~ 406 (414)
++..+.
T Consensus 305 ~~~~~~ 310 (345)
T TIGR00748 305 IVVQDA 310 (345)
T ss_pred EEEchh
Confidence 987654
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-25 Score=214.80 Aligned_cols=262 Identities=20% Similarity=0.207 Sum_probs=195.5
Q ss_pred ecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCc
Q 015003 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCS 100 (414)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~ 100 (414)
.+|++.+++...++.+..+|+.+|+++||+++|++|++||.++++++.++... ..+..++..||++ ..++++++++|+
T Consensus 35 ~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~-~~~~~v~~~Lg~~-~~~~~~v~~~Ca 112 (326)
T CHL00203 35 TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLF-GSASQLQAEIGAT-RAVAFDITAACS 112 (326)
T ss_pred eccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCC-chHHHHHHHhCCC-CCceeeecccch
Confidence 67888887767778899999999999999999999999999999987765432 3466789999997 588999999999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcC
Q 015003 101 SGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180 (414)
Q Consensus 101 s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g 180 (414)
|++.+|..|..+|++|.++++||+++|.++..
T Consensus 113 sg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~------------------------------------------------ 144 (326)
T CHL00203 113 GFILALVTATQFIQNGSYKNILVVGADTLSKW------------------------------------------------ 144 (326)
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEehhhhCc------------------------------------------------
Confidence 99999999999999999999999999998751
Q ss_pred CCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCc
Q 015003 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASI 260 (414)
Q Consensus 181 ~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 260 (414)
++.++. .+.. .
T Consensus 145 ---------------------------------------------~~~~~~-----------------~~~~-------~ 155 (326)
T CHL00203 145 ---------------------------------------------IDWSDR-----------------KTCI-------L 155 (326)
T ss_pred ---------------------------------------------CCcccC-----------------CceE-------E
Confidence 000000 0012 2
Q ss_pred ccCceeEEEEeCHHHHHHcCC--------cceEEEEEEE-----Eee-cCCC-c-----------ccc---chHHHHHHH
Q 015003 261 ISDGAAALVLVSGVKALELGL--------QVIAKIRGFA-----DAA-QAPE-W-----------FTT---APSLAIPKA 311 (414)
Q Consensus 261 ~~DGAaA~vL~s~~~a~~~~~--------~~~~~i~g~~-----~~~-~~~~-~-----------~~~---~~~~a~~~a 311 (414)
+||||+|+||++.+...-.+. .....+.... ... ..+. . +.. ...++++++
T Consensus 156 fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 235 (326)
T CHL00203 156 FGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKC 235 (326)
T ss_pred EcceeeEEEEEEcCCCCeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHH
Confidence 799999999986432100000 0000111000 000 0000 0 000 123578999
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecc
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~ 391 (414)
|+++|++++|||++.+|+.+......+.+.||++++++... ...+||+..++-...+.++++.-+.++|++.+...++
T Consensus 236 L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~--l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G 313 (326)
T CHL00203 236 LNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITN--LEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFG 313 (326)
T ss_pred HHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhH--HHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEc
Confidence 99999999999999999999999999999999999887543 5789999999988888888765555678888887788
Q ss_pred cccceeeEEEEE
Q 015003 392 GGGGASALVLEL 403 (414)
Q Consensus 392 ~gg~~~a~vl~~ 403 (414)
.|-++.+++|+.
T Consensus 314 ~G~s~~~~v~~~ 325 (326)
T CHL00203 314 AGLTWGAIVLKW 325 (326)
T ss_pred hhhhheEEEEEe
Confidence 887889999875
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=186.32 Aligned_cols=122 Identities=49% Similarity=0.805 Sum_probs=109.4
Q ss_pred cceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCC
Q 015003 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHP 361 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~ 361 (414)
+|+++|.++.....+|..+..++..+++++|+++|++++|||++|+||+|+.+.+.++|.||++++++|++||.+++|||
T Consensus 2 ~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP 81 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGHP 81 (123)
T ss_dssp -ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BH
T ss_pred CeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCccccccccccc
Confidence 57899999999998999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 362 LGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 362 ~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.|+||++++.++++||+.++++++++..|++||++.+++||+
T Consensus 82 ~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 82 LGASGARLVVELAHQLRRRGGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccchhhhhHHHHHHhchhhhhHHhcccceeeEEEEEEC
Confidence 999999999999999999999999999999999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-24 Score=210.99 Aligned_cols=261 Identities=19% Similarity=0.133 Sum_probs=195.2
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+++-..++.+..+|+.+|+++||+++|+++++||.++++++.++...+..+..++..||++ ..++++++++|+++
T Consensus 39 ~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~ 117 (325)
T PRK12879 39 TGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAGF 117 (325)
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchHH
Confidence 44444444445688999999999999999999999999999998887777788899999999997 47899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|..+|++|.+++|||+++|.++.. ..
T Consensus 118 ~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-~~----------------------------------------------- 149 (325)
T PRK12879 118 LYGLETANGLITSGLYKKVLVIGAERLSKV-TD----------------------------------------------- 149 (325)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEehhhcCc-CC-----------------------------------------------
Confidence 999999999999999999999999987651 00
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
.+. +. .+..+|
T Consensus 150 ---------------------------------------------~~~------------------~~------~~~~~G 160 (325)
T PRK12879 150 ---------------------------------------------YTD------------------RT------TCILFG 160 (325)
T ss_pred ---------------------------------------------ccc------------------cC------ceEEEe
Confidence 000 00 112279
Q ss_pred CceeEEEEeCHHHHHHcCC---------cceEEEEEEEEeecC-CC----cc---c--------cchHHHHHHHHHHcCC
Q 015003 263 DGAAALVLVSGVKALELGL---------QVIAKIRGFADAAQA-PE----WF---T--------TAPSLAIPKAIANAGL 317 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~---------~~~~~i~g~~~~~~~-~~----~~---~--------~~~~~a~~~al~~aGl 317 (414)
|||+|+||++.+....... ....++.+.+..... .. .+ . ....++++++|+++|+
T Consensus 161 DgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~ 240 (325)
T PRK12879 161 DGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGL 240 (325)
T ss_pred ecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999997542110000 000011111110000 00 00 0 0123678899999999
Q ss_pred CCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccccccee
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~ 397 (414)
+++|||+|.+|+.+......+.+.||++++++..+ ...+||+..++-...+.+++.+-+.+++++.+....+.|.+..
T Consensus 241 ~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~ 318 (325)
T PRK12879 241 TKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVS--VEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWA 318 (325)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhE
Confidence 99999999999999999999999999998887653 5779999999988888877665444577888888888888889
Q ss_pred eEEEEE
Q 015003 398 ALVLEL 403 (414)
Q Consensus 398 a~vl~~ 403 (414)
+++|+.
T Consensus 319 ~~l~~~ 324 (325)
T PRK12879 319 ALLVKW 324 (325)
T ss_pred EEEEEe
Confidence 999875
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=216.98 Aligned_cols=258 Identities=22% Similarity=0.201 Sum_probs=192.9
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
.|++.+++...++.+..+|+.+|+++||+++|++++|||.+++++++++.. +..+..++..||++ ..++++++.+|++
T Consensus 81 ~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~-~~~a~~v~~~LG~~-~~~~~dv~~~Ca~ 158 (379)
T PLN02326 81 RTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL-FGSAPQVQAALGCT-NALAFDLTAACSG 158 (379)
T ss_pred ccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc-CcHHHHHHHHhCCC-CCceeeccccchH
Confidence 356666655556789999999999999999999999999999998876543 34577899999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|..+|++|.+++|||+++|.++... .
T Consensus 159 ~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~-~---------------------------------------------- 191 (379)
T PLN02326 159 FVLGLVTAARFIRGGGYKNVLVIGADALSRYV-D---------------------------------------------- 191 (379)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEechhcCCC-C----------------------------------------------
Confidence 99999999999999999999999999976510 0
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
+ - | +. ++..+
T Consensus 192 ------------------------------~-------------~--d-------------------~~------~~~lf 201 (379)
T PLN02326 192 ------------------------------W-------------T--D-------------------RG------TCILF 201 (379)
T ss_pred ------------------------------c-------------c--c-------------------cC------ceEEE
Confidence 0 0 0 00 11237
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEE------------EEe-------e----cCC---Cc---ccc----------
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGF------------ADA-------A----QAP---EW---FTT---------- 302 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~------------~~~-------~----~~~---~~---~~~---------- 302 (414)
||||+|+||++.+..+ .+... ..+... +.. . +.+ .. +..
T Consensus 202 GDGAaAvlL~~~~~~~-~~i~~-~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 279 (379)
T PLN02326 202 GDGAGAVVLQACDDDE-DGLLG-FDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAV 279 (379)
T ss_pred cceeEEEEEEEcCCCC-CceEE-EEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHH
Confidence 9999999999753211 01000 011100 000 0 000 00 000
Q ss_pred -chHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC
Q 015003 303 -APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (414)
Q Consensus 303 -~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~ 381 (414)
...+.++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..++-...+.+++..-+.++
T Consensus 280 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~--l~~~GNt~sAsi~~~L~~~~~~g~~~~ 357 (379)
T PLN02326 280 RCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKVISN--LANYGNTSAASIPLALDEAVRSGKVKK 357 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeec--HhhcCcHHHHHHHHHHHHHHHcCCCCC
Confidence 01357889999999999999999999999999999999999999887654 567999999998888888776545567
Q ss_pred CCeeEEeecccccceeeEEEE
Q 015003 382 GKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 382 ~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|++.+...++.|-++.+++|+
T Consensus 358 Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 358 GDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred CCEEEEEEEChhheeeEEEEE
Confidence 888888888888888888886
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=213.68 Aligned_cols=271 Identities=20% Similarity=0.109 Sum_probs=195.8
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+|+-..++.++.+|+.+|+++||+++|+++++||.+++++..+++..|..+..++..||++++++++++.++|+|+
T Consensus 47 ~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~ 126 (338)
T PRK09258 47 TGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGF 126 (338)
T ss_pred cCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHH
Confidence 34444333334678999999999999999999999999999999887777888999999999997668999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
++||..|..+|++|.+++|||+++|..+.. +.... .
T Consensus 127 ~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~-~~~~~------------------------------~------------- 162 (338)
T PRK09258 127 LNGMLDAANMIELGQIDYALVVSGESAREI-VEATI------------------------------D------------- 162 (338)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEecccchh-ccchh------------------------------h-------------
Confidence 999999999999999999999999997651 10000 0
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
.+.. + ....++ + .+......+|
T Consensus 163 ----------------------~~~~---~----~~~~~~---~--------------------------~~~~~~~~~G 184 (338)
T PRK09258 163 ----------------------RLLA---P----ETTRED---F--------------------------AQSFATLTLG 184 (338)
T ss_pred ----------------------hhcc---C----ccchhh---h--------------------------hhccceEEec
Confidence 0000 0 000000 0 0001112279
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC---------CCcc-c----------cchHHHHHHHHHHcCCCCCCC
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQA---------PEWF-T----------TAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~---------~~~~-~----------~~~~~a~~~al~~aGl~~~DI 322 (414)
|||+|+||++.+.. ..+ ..+.+....++. ...+ . ....++++++|+++|++++||
T Consensus 185 DGA~A~ll~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~di 259 (338)
T PRK09258 185 SGAAAAVLTRGSLH-PRG----HRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQV 259 (338)
T ss_pred ccceEEEEecCCCC-CCc----ceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 99999999975421 011 123332221110 0000 0 112358889999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|++.+|+.+......+.+.||++++++..+ ...+||+.+++-...+.+++.+-+.+.|++.+...++.|-+..+++|+
T Consensus 260 d~~i~H~~~~~~~~~~~~~lgl~~~k~~~~--~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 260 DRVICHQVGAAHTRAILKALGIDPEKVFTT--FPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred CEEecCCCCHHHHHHHHHHhCCCHHHceeh--HhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeee
Confidence 999999999999999999999999887654 346899999998888888876544557788888878877777777775
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=210.13 Aligned_cols=267 Identities=20% Similarity=0.240 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-------------C--------------CCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------L--------------GQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-------------~--------------~~~~a~~va~~lg 85 (414)
...++..|+++||+|+|+++++++ .+++|+..+.. . ....+.+++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 457889999999999999765544 35666532221 0 0125677999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+.+|++|++|++||+|+|..+. +... .
T Consensus 151 l~--Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~-~~~~-~--------------------------- 199 (406)
T PRK07967 151 IK--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDW-EMSC-L--------------------------- 199 (406)
T ss_pred CC--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCh-HHHH-H---------------------------
Confidence 94 899999999999999999999999999999999999997543 1100 0
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
|. .+ . .+... ....++..|+| |+++
T Consensus 200 --f~------------------~~---------~-----~ls~~--~~~~p~~~~rP---Fd~~---------------- 224 (406)
T PRK07967 200 --FD------------------AM---------G-----ALSTK--YNDTPEKASRA---YDAN---------------- 224 (406)
T ss_pred --HH------------------Hh---------h-----hhccC--CCCCCCcCCcC---CcCC----------------
Confidence 00 00 0 00000 00113457788 7877
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc---ccchHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF---TTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~---~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++|||+++||++.+.|++++.+++++|.|++...+..... .....++++++|+.++ + ||
T Consensus 225 ---r~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~I 291 (406)
T PRK07967 225 ---RDGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PI 291 (406)
T ss_pred ---CCcee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-Cc
Confidence 88888 7999999999999999999999999999999887643322 2345688999998544 4 99
Q ss_pred ceeeccccchh----HHHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------
Q 015003 323 DYYEINEAFSV----VAIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~----~~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------- 381 (414)
|+|+.|-..+. .+.. +.+.||- +++.++..|..+||+.+++|+..++..+.+|+.+-
T Consensus 292 dyi~aHgtGT~~~D~~E~~Ai~~~fg~--~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~ 369 (406)
T PRK07967 292 DYINTHGTSTPVGDVKELGAIREVFGD--KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAG 369 (406)
T ss_pred cEEEcCCCCCCCCCHHHHHHHHHHhCC--CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccC
Confidence 99999977763 2333 3444653 33567777999999999999999999999988641
Q ss_pred ------------CCeeEEeecccccceeeEEEEEe
Q 015003 382 ------------GKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 382 ------------~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
.++.+.++++.||+++++||++.
T Consensus 370 ~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 370 MPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred CCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 13456778999999999999975
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=211.95 Aligned_cols=260 Identities=13% Similarity=0.079 Sum_probs=189.3
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+...++.+..+|+.+|+++||+++|++++|||.+|++++++++..|..+..++.+||+++++++++++.+|+++
T Consensus 46 ~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~ 125 (353)
T PRK12880 46 IGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGY 125 (353)
T ss_pred cCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHH
Confidence 55555554456789999999999999999999999999999999999999999999999999998778999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+++|..|..+|++|..+ +||+++|..|..
T Consensus 126 ~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~-------------------------------------------------- 154 (353)
T PRK12880 126 LYGLFVAHSLIQSGLGK-ILLICGDTLSKF-------------------------------------------------- 154 (353)
T ss_pred HHHHHHHHHHHHcCCCC-EEEEEehhhhcc--------------------------------------------------
Confidence 99999999999999999 999999987651
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+++++ +. ....+|
T Consensus 155 -------------------------------------------~~~~d------------------~~------~~~lFG 167 (353)
T PRK12880 155 -------------------------------------------IHPKN------------------MN------LAPIFG 167 (353)
T ss_pred -------------------------------------------CCccc------------------CC------ceeeec
Confidence 00000 00 011279
Q ss_pred CceeEEEEeCHHHHHHc------CC-cceEEEEEEEEeec-------C----CCc--------c-cc--------chHHH
Q 015003 263 DGAAALVLVSGVKALEL------GL-QVIAKIRGFADAAQ-------A----PEW--------F-TT--------APSLA 307 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~------~~-~~~~~i~g~~~~~~-------~----~~~--------~-~~--------~~~~a 307 (414)
|||+|+||+..+..... +. .....+.+.+.... . +.. + +. ...++
T Consensus 168 DGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 247 (353)
T PRK12880 168 DGVSATLIEKTDFNEAFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKS 247 (353)
T ss_pred ccceEEEEEecCCCCceEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHH
Confidence 99999999853311000 00 00011111110000 0 000 0 00 11368
Q ss_pred HHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 308 IPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 308 ~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
++++|+++|++.+|||++.+||.+......+.+.||++++++.. --...+||..++|-...+.++. ..+ .-+.+.
T Consensus 248 i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~-~~l~~~GNtssasip~~L~~~~---~~~-~~~~ll 322 (353)
T PRK12880 248 FKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPN-FIMEKYANLSACSLPALLCELD---TPK-EFKASL 322 (353)
T ss_pred HHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh-hhHHhhCCHHHHHHHHHHHHHH---HcC-CcEEEE
Confidence 89999999999999999999999999999999999999988732 1135589998888666665553 222 233567
Q ss_pred eecccccceeeEEEEEec
Q 015003 388 GICNGGGGASALVLELMQ 405 (414)
Q Consensus 388 ~~~~~gg~~~a~vl~~~~ 405 (414)
..+|+|-++++++|+..+
T Consensus 323 ~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 323 SAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred EEEchhhhheEeEEEECC
Confidence 677777789999999854
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=210.89 Aligned_cols=258 Identities=17% Similarity=0.131 Sum_probs=191.0
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++..++-..++.+..+|+.+|+++||+++|+++++||.++++++++++..|..+.+|+.+||++ ..+++++..+|+++
T Consensus 38 ~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~ 116 (326)
T PRK05963 38 TGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACAGF 116 (326)
T ss_pred cCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhhHH
Confidence 44544433445689999999999999999999999999999999998877888999999999997 47899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
++||..|..+|+++. +.+||+++|..+..
T Consensus 117 ~~aL~~A~~~l~~~~-~~aLVv~~d~~s~~-------------------------------------------------- 145 (326)
T PRK05963 117 LYALVLADGFVRAQG-KPVLVVAANILSRR-------------------------------------------------- 145 (326)
T ss_pred HHHHHHHHHHHHcCC-CeEEEEEechhhcc--------------------------------------------------
Confidence 999999999999985 99999999986641
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+++++ +. ....+|
T Consensus 146 -------------------------------------------~~~~~------------------~~------~~~lfG 158 (326)
T PRK05963 146 -------------------------------------------INMAE------------------RA------SAVLFA 158 (326)
T ss_pred -------------------------------------------CCccc------------------cC------ceEEEe
Confidence 00000 00 111279
Q ss_pred CceeEEEEeCHHHHHHcCCcce-----------EEEEEEEEeec---C--C-C-cc--c----------cchHHHHHHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVI-----------AKIRGFADAAQ---A--P-E-WF--T----------TAPSLAIPKAI 312 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~-----------~~i~g~~~~~~---~--~-~-~~--~----------~~~~~a~~~al 312 (414)
|||+|+||+..+... .+.... ..+...+.... + . . .+ . ....+.++++|
T Consensus 159 DgA~A~ll~~~~~~~-~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 237 (326)
T PRK05963 159 DAAGAVVLAPSAKAN-SGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVL 237 (326)
T ss_pred ecceEEEEEecCCCC-CceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999998643210 010000 01111000000 0 0 0 00 0 01246788999
Q ss_pred HHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccc
Q 015003 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (414)
Q Consensus 313 ~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~ 392 (414)
+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..++-...+.++...-+.+.|++.+...++.
T Consensus 238 ~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~~~~--l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~ 315 (326)
T PRK05963 238 ASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAAST--LETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGA 315 (326)
T ss_pred HHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeh
Confidence 9999999999999999999999999999999999887543 56799998888777776666544445778888888888
Q ss_pred ccceeeEEEE
Q 015003 393 GGGASALVLE 402 (414)
Q Consensus 393 gg~~~a~vl~ 402 (414)
|-++.++||+
T Consensus 316 G~~~~~~ll~ 325 (326)
T PRK05963 316 GMTGGAVVMR 325 (326)
T ss_pred hhhheeeEEe
Confidence 8888888886
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=209.25 Aligned_cols=258 Identities=21% Similarity=0.178 Sum_probs=196.1
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
++++.++....++.+..+|+.+|++++|+++|+++++||.+++++..++...+..+.+++..+|+. .+++++++++|++
T Consensus 37 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~~Cas 115 (319)
T PRK09352 37 RTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLSAACSG 115 (319)
T ss_pred hcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeeccccchh
Confidence 577776665667889999999999999999999999999999998887665677788999999995 5899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.+|..|..+|++|.+++|||+++|+++.. ...
T Consensus 116 g~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~--------------------------------------------- 149 (319)
T PRK09352 116 FVYALSTADQFIRSGAYKNVLVIGAEKLSRI-VDW--------------------------------------------- 149 (319)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhccc-cCc---------------------------------------------
Confidence 9999999999999999999999999997651 000
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
.++ . .+..+
T Consensus 150 --------------------------------------------~~~--------------------~-------~~~~~ 158 (319)
T PRK09352 150 --------------------------------------------TDR--------------------S-------TCVLF 158 (319)
T ss_pred --------------------------------------------ccC--------------------C-------ceEEE
Confidence 000 0 11237
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEEEeec---CCCc----------c---c--------cchHHHHHHHHHHcCC
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ---APEW----------F---T--------TAPSLAIPKAIANAGL 317 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~---~~~~----------~---~--------~~~~~a~~~al~~aGl 317 (414)
||||+|+||++++.. +... ..+...+...+ .+.. . . ....++++++|+++|+
T Consensus 159 gDGaaA~ll~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~ 234 (319)
T PRK09352 159 GDGAGAVVLGASEEP---GILS-THLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGL 234 (319)
T ss_pred eccceEEEEEEcCCC---CeEE-EEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999986431 1100 11111110000 0000 0 0 0124688999999999
Q ss_pred CCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccccccee
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~ 397 (414)
+++|||++.+|+.+........+.||++++++..+ ...+||..+++-...+.+++..-+.+++++.+..+.+.|.+..
T Consensus 235 ~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~ 312 (319)
T PRK09352 235 TPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVT--VDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWG 312 (319)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeE
Confidence 99999999999999999999999999999887543 5578999999988887777654344567888887777788888
Q ss_pred eEEEEE
Q 015003 398 ALVLEL 403 (414)
Q Consensus 398 a~vl~~ 403 (414)
+++|+.
T Consensus 313 ~~ll~~ 318 (319)
T PRK09352 313 AALVRW 318 (319)
T ss_pred EEEEEe
Confidence 999875
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=208.79 Aligned_cols=253 Identities=21% Similarity=0.191 Sum_probs=195.6
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
.+++.+++...++.++.+|+.+|+++||+++|+++++||.+++++..++...+..+..++..||++ ..++++++.+|++
T Consensus 36 ~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~~C~s 114 (318)
T TIGR00747 36 RTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSAACAG 114 (318)
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehhhhhHH
Confidence 366666655566789999999999999999999999999999998887766677888999999997 4789999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.+|..|..+|++|.++++||+++|.++. +...
T Consensus 115 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~-~~~~--------------------------------------------- 148 (318)
T TIGR00747 115 FIYALSVAKQYIESGKYKTVLVVGAEKLSS-TLDW--------------------------------------------- 148 (318)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEehhhcC-cCCc---------------------------------------------
Confidence 999999999999999999999999999764 1000
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
.+ +. .+..+
T Consensus 149 --------------------------------------------~~---------------------~~------~~~~~ 157 (318)
T TIGR00747 149 --------------------------------------------TD---------------------RG------TCVLF 157 (318)
T ss_pred --------------------------------------------CC---------------------CC------eEEEE
Confidence 00 00 11127
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C-------Cc-----------cc---cchHHHHHHHH
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P-------EW-----------FT---TAPSLAIPKAI 312 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~-------~~-----------~~---~~~~~a~~~al 312 (414)
||||+|+||++.+... . |......++. + .. +. ....++++++|
T Consensus 158 GDGAaA~lL~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (318)
T TIGR00747 158 GDGAGAVVLGESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETL 229 (318)
T ss_pred ecceeEEEEeecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999764311 1 1111111100 0 00 00 01246788999
Q ss_pred HHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccc
Q 015003 313 ANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNG 392 (414)
Q Consensus 313 ~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~ 392 (414)
+++|++++||+++.+|+.+......+.+.||++++++..+ ...+||+.+++-...+.+++..-+.+.+++.+....+.
T Consensus 230 ~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~ 307 (318)
T TIGR00747 230 EANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKT--VHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGG 307 (318)
T ss_pred HHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--HhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEeh
Confidence 9999999999999999999999999999999999887644 45589999999888888877654456778888877888
Q ss_pred ccceeeEEEE
Q 015003 393 GGGASALVLE 402 (414)
Q Consensus 393 gg~~~a~vl~ 402 (414)
|.+..+++|+
T Consensus 308 G~t~~~~~l~ 317 (318)
T TIGR00747 308 GLTWGAALVR 317 (318)
T ss_pred hheeeEEEEE
Confidence 8888888886
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=213.09 Aligned_cols=265 Identities=25% Similarity=0.299 Sum_probs=195.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC-------------------CCCcHHHHHHHHCCCCCCcce
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~-------------------~~~~~a~~va~~lgl~~~~~~ 92 (414)
+..+|+.+|+++||+|||+++++++. +++|+..+++ .....+..++..+|++ ++.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 45789999999999999999888875 6666653321 1133567799999994 799
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++++++|+|++.||..|+.+|++|.+|++||+|+|.+.. +.....
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~~~~---------------------------------- 208 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILS-PDMFVG---------------------------------- 208 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCC-HHHHHH----------------------------------
Confidence 999999999999999999999999999999999998654 221110
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCc
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGS 252 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 252 (414)
+... +.+. +...++| |+.+ ++|.
T Consensus 209 ---~~~~------------------------~~l~--------~~~~~~p---f~~~-------------------~~g~ 231 (421)
T cd00833 209 ---FSKA------------------------GMLS--------PDGRCRP---FDAD-------------------ADGY 231 (421)
T ss_pred ---HhhC------------------------CCCC--------CCCCCCC---CCCC-------------------CCCe
Confidence 0000 0000 0122344 4433 4556
Q ss_pred cccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCCCCceeec
Q 015003 253 VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEI 327 (414)
Q Consensus 253 ~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~ 327 (414)
+ ++|||+++||++++.+++++.+++++|.|++...+.... ......++++++|+++|++++|||+++.
T Consensus 232 ~-------~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~ 304 (421)
T cd00833 232 V-------RGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEA 304 (421)
T ss_pred e-------eeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEe
Confidence 5 799999999999999999999999999999987653211 1234578999999999999999999999
Q ss_pred cccchhH----HHH-HHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC------------------
Q 015003 328 NEAFSVV----AIA-NQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK------------------ 381 (414)
Q Consensus 328 hd~~~~~----~~~-~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~------------------ 381 (414)
|..++.. +.. +.+.++-. ..++..+..|..+||+.+++|+..++.++.+|+.+.
T Consensus 305 hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 384 (421)
T cd00833 305 HGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEE 384 (421)
T ss_pred eCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCccc
Confidence 9988753 222 23333332 235677777888999999999999999999998641
Q ss_pred -----------------CCeeEEeecccccceeeEEE
Q 015003 382 -----------------GKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 382 -----------------~~~~l~~~~~~gg~~~a~vl 401 (414)
.++.+...++.||.++++||
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 385 SPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CCeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 13345666788888888875
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-24 Score=209.72 Aligned_cols=253 Identities=21% Similarity=0.228 Sum_probs=193.5
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHH
Q 015003 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (414)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~ 103 (414)
++.+++...++.+..+|+.+|+++||+++|++++|||.++++++++++..|..+..++..||+++.+++++++++|++++
T Consensus 38 Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~ 117 (347)
T PRK04262 38 GVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGT 117 (347)
T ss_pred CeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHH
Confidence 33334444467899999999999999999999999999999988887767778889999999975578899999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCH
Q 015003 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (414)
Q Consensus 104 ~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 183 (414)
.+|..|..+|++|.+++|||+++|.....|.
T Consensus 118 ~aL~~A~~~i~sg~~~~aLVv~~e~~~~~~~------------------------------------------------- 148 (347)
T PRK04262 118 AALQAAMGLVKSGMIKYALAIGADTAQGAPG------------------------------------------------- 148 (347)
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEeeeccCCC-------------------------------------------------
Confidence 9999999999999999999999998321000
Q ss_pred HHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccC
Q 015003 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (414)
Q Consensus 184 ~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (414)
+ . + . .. .||
T Consensus 149 ------------------------~---~-------------~----------------------~--~~-------~GD 157 (347)
T PRK04262 149 ------------------------D---A-------------L----------------------E--YT-------AAA 157 (347)
T ss_pred ------------------------C---C-------------C----------------------C--Cc-------CCC
Confidence 0 0 0 0 01 599
Q ss_pred ceeEEEEeCHHHHHHcCCcceEEEEEEE-EeecC-----------CC---cc------ccchHHHHHHHHHHcCCCCCCC
Q 015003 264 GAAALVLVSGVKALELGLQVIAKIRGFA-DAAQA-----------PE---WF------TTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 264 GAaA~vL~s~~~a~~~~~~~~~~i~g~~-~~~~~-----------~~---~~------~~~~~~a~~~al~~aGl~~~DI 322 (414)
||+|+||+.++.. .+|.+.. ...+. +. .+ .....++++++|+++|++++||
T Consensus 158 GA~A~ll~~~~~~--------~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dI 229 (347)
T PRK04262 158 GGAAFIIGKEEVI--------AEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDY 229 (347)
T ss_pred CcEEEEEecCccc--------ceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHh
Confidence 9999999864311 1222211 00000 00 00 0123578899999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|++.+|+.+..+...+.+.||++++++..+--...+||+.+++-...+.+++.+ .+++++.+...+|.|-+..+++++
T Consensus 230 d~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~--~~~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 230 DYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV--AKPGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred ceeecCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh--CCCCCEEEEEecCCCcceeeEEEE
Confidence 999999999999999999999999887543224678999999999888888764 457788888878888888888888
Q ss_pred Eecc
Q 015003 403 LMQA 406 (414)
Q Consensus 403 ~~~~ 406 (414)
..+.
T Consensus 308 ~~~~ 311 (347)
T PRK04262 308 VTDA 311 (347)
T ss_pred echh
Confidence 6544
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-24 Score=206.45 Aligned_cols=250 Identities=21% Similarity=0.152 Sum_probs=191.2
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+++-..++.+..+|+.+|+++||+++|+++++||.+++++..++...+..+..++..||++ .+++++++++|+++
T Consensus 36 ~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~ 114 (320)
T cd00830 36 TGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINAACSGF 114 (320)
T ss_pred cCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccchHH
Confidence 44544544445689999999999999999999999999999998887766678889999999997 68999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.+|..|..+|++|.++++||+++|.++.. ..
T Consensus 115 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~----------------------------------------------- 146 (320)
T cd00830 115 LYGLSTAAGLIRSGGAKNVLVVGAETLSRI-LD----------------------------------------------- 146 (320)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEehhhccc-cC-----------------------------------------------
Confidence 999999999999999999999999997751 00
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
|.. + ..+.+ +|
T Consensus 147 -----------------------~~~---~------------------------------------~~~~~-------~G 157 (320)
T cd00830 147 -----------------------WTD---R------------------------------------STAVL-------FG 157 (320)
T ss_pred -----------------------ccc---C------------------------------------CceEE-------Ee
Confidence 000 0 01122 79
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC---------------C--------Cc--c-c--------cchHHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQA---------------P--------EW--F-T--------TAPSLAI 308 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~---------------~--------~~--~-~--------~~~~~a~ 308 (414)
|||+|+||++.+. +. .+.+....++. + .. + . ....+++
T Consensus 158 DgAaA~ll~~~~~----~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (320)
T cd00830 158 DGAGAVVLEATEE----DP----GILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESI 229 (320)
T ss_pred ccceEEEEEecCC----CC----cEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHH
Confidence 9999999997642 11 11221111110 0 00 0 0 1124788
Q ss_pred HHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 309 PKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 309 ~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
+++|+++|++++|||++.+|+.+......+.+.||++++++... ...+||+..++-...+.+++.+-+.+++++.+..
T Consensus 230 ~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~ 307 (320)
T cd00830 230 EEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVN--LDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLL 307 (320)
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 99999999999999999999999999999999999999887543 5578999999988888888766455578887777
Q ss_pred ecccccceeeEE
Q 015003 389 ICNGGGGASALV 400 (414)
Q Consensus 389 ~~~~gg~~~a~v 400 (414)
..+.|-+..+++
T Consensus 308 ~~G~G~~~~~~l 319 (320)
T cd00830 308 GFGAGLTWGAAL 319 (320)
T ss_pred EEchHHhhHHhh
Confidence 776666665554
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=203.21 Aligned_cols=267 Identities=20% Similarity=0.186 Sum_probs=183.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
.+..+|+.+|+++||+++|++++|||.++++++.+++..|..+..++..||++ .+++++++.+|+|++.+|..|..+|+
T Consensus 61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i~ 139 (378)
T PRK06816 61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSVK 139 (378)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999887665666677899999997 47899999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+++|.+|.. ..... +.. ++..+
T Consensus 140 sg~~~~vLvv~~E~~s~~-~~~~~-----------------------------~~~--------------~~~~~----- 170 (378)
T PRK06816 140 AGESRNAVATASELASRW-FRASR-----------------------------FEA--------------EEEKL----- 170 (378)
T ss_pred CCCCCEEEEEeEccchhh-hhhhh-----------------------------hhh--------------HHHHh-----
Confidence 999999999999998862 11000 000 00000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
|. .....+.| |+.+ ..+.+ +||||+|+||+..+
T Consensus 171 -----------------~~-~~~~~~~~---~~~~-------------------~~~~~-------fGDGA~A~vl~~~~ 203 (378)
T PRK06816 171 -----------------AE-LEENPEIA---FEKD-------------------FLRWM-------LSDGAGAVLLENKP 203 (378)
T ss_pred -----------------hc-CcccCCCC---CCCC-------------------CCCEe-------eecccEEEEEEecC
Confidence 00 00000111 2222 22334 79999999998654
Q ss_pred HHHHcCCcce-EEEE--EEEE-------ee-c-CC------------C--------ccc-----------cchHHHHHHH
Q 015003 275 KALELGLQVI-AKIR--GFAD-------AA-Q-AP------------E--------WFT-----------TAPSLAIPKA 311 (414)
Q Consensus 275 ~a~~~~~~~~-~~i~--g~~~-------~~-~-~~------------~--------~~~-----------~~~~~a~~~a 311 (414)
.. .+.... ..+. .... .. . .+ . .+. ......++++
T Consensus 204 ~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 281 (378)
T PRK06816 204 RP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLEL 281 (378)
T ss_pred CC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHH
Confidence 21 111000 0000 0000 00 0 00 0 000 0114678889
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHc-----CCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLL-----GLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~l-----Gl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
|+++|++++|||+|.+|+.+..+...+.+.| |++++++..+ ...+||+..++-.+.+.+++.+-+.++|++.+
T Consensus 282 L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~--~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl 359 (378)
T PRK06816 282 VDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTN--LATVGNTGSASIYIMLDELLNSGRLKPGQKIL 359 (378)
T ss_pred HHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEe--ccccccccchHHHHHHHHHHHcCCCCCCCEEE
Confidence 9999999999999999999999999999987 8998886543 45789999999988888887766666777755
Q ss_pred Eeeccccc-ceeeEEEE
Q 015003 387 GGICNGGG-GASALVLE 402 (414)
Q Consensus 387 ~~~~~~gg-~~~a~vl~ 402 (414)
....++|+ ..+.++|.
T Consensus 360 ~~~~~s~~~~~~~~~~~ 376 (378)
T PRK06816 360 CFVPESGRFSTAFMLLT 376 (378)
T ss_pred EEEecccchhheeEEEE
Confidence 54444443 33556554
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=199.70 Aligned_cols=264 Identities=20% Similarity=0.202 Sum_probs=194.8
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCccccCeEEEEeec-----CCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVL-----SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVM 107 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAg-i~~~~Id~vi~g~~~-----~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~ 107 (414)
..+..+|+.+|+++||++++ +++++||.+++.... +....+..+..++..+|++...+.+++.++|+|+++||.
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~ 141 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALA 141 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHH
Confidence 35788999999999999999 789999988864331 111122356678889998545788999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHH
Q 015003 108 LAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187 (414)
Q Consensus 108 ~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~ 187 (414)
.|+.+|++|++|.+||+|+|.++. +..+..
T Consensus 142 ~A~~~i~~G~~~~~lvgg~d~~~~-~~~~~~------------------------------------------------- 171 (348)
T PRK06147 142 QARRLIAAGGCPRVLVAGVDSLLT-GPTLAH------------------------------------------------- 171 (348)
T ss_pred HHHHHHHcCCCCEEEEEeeccccC-HHHHHH-------------------------------------------------
Confidence 999999999999999999998776 221110
Q ss_pred HHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeE
Q 015003 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAA 267 (414)
Q Consensus 188 ~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA 267 (414)
+. .. ... +..+ .++|.+ +||||++
T Consensus 172 -~~------~~----~~l--------------------~~~~------------------~~~G~v-------~GEGA~a 195 (348)
T PRK06147 172 -YE------AR----DRL--------------------LTSQ------------------NSNGFI-------PGEAAAA 195 (348)
T ss_pred -HH------Hh----hcc--------------------CCCC------------------CCCcee-------eeceEEE
Confidence 00 00 000 1000 045666 8999999
Q ss_pred EEEeCHHHHHHcCCcceEEEEEEEEeecCC------CccccchHHHHHHHHHHcCCCCCCCceeeccccchhH-----HH
Q 015003 268 LVLVSGVKALELGLQVIAKIRGFADAAQAP------EWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-----AI 336 (414)
Q Consensus 268 ~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~-----~~ 336 (414)
+||++.+.+++++.++++ .|++...+.. ........++++++|+++|++++|||++..|-..+.. ..
T Consensus 196 ~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~ 273 (348)
T PRK06147 196 VLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAAL 273 (348)
T ss_pred EEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHH
Confidence 999999999988888876 4444433321 1123355799999999999999999999998776543 12
Q ss_pred HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc--CCCeeEEeecccccceeeEEEEEec
Q 015003 337 ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 337 ~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.+.+.++-..+++.++..|..+||+.+++|..+++.++.+++.+ .+.+.|..+..-.|.-.+++|+..+
T Consensus 274 A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 274 AEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred HHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEeccc
Confidence 23344654334445556688999999999999999999999976 4667788888888888899998654
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=199.85 Aligned_cols=255 Identities=20% Similarity=0.079 Sum_probs=189.8
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEee-cCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~-~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+++.+++-..++.+..+|+.+|+++||+++|++|++||.++++++ .+++..+..+.+++..||++ ..+++++.++|++
T Consensus 39 ~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C~~ 117 (339)
T PRK06840 39 FGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVCAS 117 (339)
T ss_pred cCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-CcccccccccchH
Confidence 444444444456899999999999999999999999999986543 44555677788999999997 5889999999999
Q ss_pred HHHHHHHHHHHHHc-CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcC
Q 015003 102 GMKAVMLAAQSIQL-GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHT 180 (414)
Q Consensus 102 ~~~al~~A~~~I~s-G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g 180 (414)
++.+|..|..+|++ |.++++||++.|..+.. ...
T Consensus 118 ~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~-~~~-------------------------------------------- 152 (339)
T PRK06840 118 FPIALKVAKDLLYSDPSIENVLLVGGYRNSDL-VDY-------------------------------------------- 152 (339)
T ss_pred HHHHHHHHHHHHhcCCCccEEEEEeecccccc-cCc--------------------------------------------
Confidence 99999999999999 99999999999987641 000
Q ss_pred CCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCc
Q 015003 181 ITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASI 260 (414)
Q Consensus 181 ~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 260 (414)
. ++ ....+ -.
T Consensus 153 --------------------------~-------------------~~--------------------~~~~~-----~~ 162 (339)
T PRK06840 153 --------------------------D-------------------NP--------------------RTRFM-----FN 162 (339)
T ss_pred --------------------------C-------------------CC--------------------Ceeee-----cc
Confidence 0 00 00011 01
Q ss_pred ccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeec---------------CC------------------Cccc------
Q 015003 261 ISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ---------------AP------------------EWFT------ 301 (414)
Q Consensus 261 ~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~---------------~~------------------~~~~------ 301 (414)
+||||+|+||+.++. +. .|.+....++ .+ ..+.
T Consensus 163 ~GDgAaA~ll~~~~~----~~----~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK06840 163 FAAGGSAALLKKDAG----KN----RILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEV 234 (339)
T ss_pred CCCceeEEEEEecCC----CC----ceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhh
Confidence 699999999986532 11 1111111100 00 0000
Q ss_pred --cchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 302 --TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 302 --~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
....++++++|+++|++++|||++.+|+.+......+.+.||++++++. . ...+||+..++-...+.+++.+-+.
T Consensus 235 ~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~-~--~~~~Gn~~sas~~~~L~~~~~~~~~ 311 (339)
T PRK06840 235 SIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAI-Y--LDEYGHLGQLDQILSLHLALEQGKL 311 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeE-e--HHhccchhhhhHHHHHHHHHHcCCC
Confidence 0124788899999999999999999999998888889999999988764 2 4578999999988888777654444
Q ss_pred cCCCeeEEeecccccceeeEEEEEe
Q 015003 380 KKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 380 ~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
++|++.+...++.|.++.+++|+..
T Consensus 312 ~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 312 KDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred CCCCEEEEEEEehhhheeEEEEEec
Confidence 5788888888888889999999875
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.9e-22 Score=196.67 Aligned_cols=238 Identities=19% Similarity=0.139 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC--------------------------------------CC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------------------GQ 74 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~--------------------------------------~~ 74 (414)
...|+..|+++||+|||++..+.+ .+++|+..+... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 556889999999999999643322 356776544210 01
Q ss_pred cHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccc
Q 015003 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM 154 (414)
Q Consensus 75 ~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~ 154 (414)
..+.+++..+|++ +|+++++++|+|++.||.+|+++|++|++|++||+|+|.... |..+..
T Consensus 153 ~~a~~is~~~gl~--Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~~~~~---------------- 213 (398)
T PRK06519 153 LLAGNISIVHKVT--GSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PDMLLL---------------- 213 (398)
T ss_pred HHHHHHHHHhCCC--CccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH----------------
Confidence 2567789999994 899999999999999999999999999999999999997554 322210
Q ss_pred ccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc
Q 015003 155 LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (414)
Q Consensus 155 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~ 234 (414)
|. .. +.+. ...++|+ |++.
T Consensus 214 -------------~~--------~~------------------------~~ls---------~~~~~p~--~d~~----- 232 (398)
T PRK06519 214 -------------YE--------LG------------------------GLLL---------KGGWAPV--WSRG----- 232 (398)
T ss_pred -------------HH--------Hc------------------------CccC---------CCCCCch--hccC-----
Confidence 00 00 0000 0111221 2220
Q ss_pred cCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHH
Q 015003 235 FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIAN 314 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~ 314 (414)
+ ..++|.+ ++|||+++||++.+.+++++.+++++|.|++.... +. ......++++++|++
T Consensus 233 ----------~-~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~~ 292 (398)
T PRK06519 233 ----------G-EDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLKP 292 (398)
T ss_pred ----------c-cCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHHH
Confidence 0 0167787 79999999999999999999999999999964322 21 223567899999999
Q ss_pred cCCCCCCCceeeccccchhH----HHHHHH-HcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 315 AGLEASQIDYYEINEAFSVV----AIANQK-LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 315 aGl~~~DId~~~~hd~~~~~----~~~~~e-~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
||+ ++|||||+.|-..+.. +...++ .|+ ++++..|..+||+++++|+..++..+++|+.+
T Consensus 293 Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~-----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 293 AGG-LAAPTAVISGATGAHPATAEEKAALEAALA-----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred CCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC-----CCccccchhhccchHHHHHHHHHHHHHHHhcC
Confidence 999 8999999999887642 333333 345 34667799999999999999999999999976
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-23 Score=204.80 Aligned_cols=245 Identities=18% Similarity=0.126 Sum_probs=179.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHc
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~s 115 (414)
+..+|+.+|+++||+++|+++++||.+++++..++...+..+..++..||++ +++++++.+|+|++.+|..|..+|++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~ 171 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRS 171 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999998876666677788999999995 68999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHH
Q 015003 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (414)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~ 195 (414)
|.+++|||+++|.++... .
T Consensus 172 g~~~~vLvv~~e~~s~~~-~------------------------------------------------------------ 190 (372)
T PRK07515 172 GSARRVLVVNPEICSGHL-N------------------------------------------------------------ 190 (372)
T ss_pred CCCCEEEEEeeecccccc-c------------------------------------------------------------
Confidence 999999999999976410 0
Q ss_pred hHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHH
Q 015003 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (414)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~ 275 (414)
+ -++ ..+.+ +||||+|+||++.+.
T Consensus 191 ----------------~-------------~d~--------------------~~~~l-------fGDgAaA~vL~~~~~ 214 (372)
T PRK07515 191 ----------------F-------------RDR--------------------DSHFI-------FGDVATAVIVERADT 214 (372)
T ss_pred ----------------c-------------cCC--------------------CCCEE-------ecCccEEEEEeeccc
Confidence 0 000 11233 799999999998654
Q ss_pred HHHcC-CcceEEEEEE----------EEeec-CCCc----------ccc--------chHHHHHHHHHHcCCCCCCCcee
Q 015003 276 ALELG-LQVIAKIRGF----------ADAAQ-APEW----------FTT--------APSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 276 a~~~~-~~~~~~i~g~----------~~~~~-~~~~----------~~~--------~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+...+ ..++...... +.... .+.. .+. ...++++++|+++|++++|||+|
T Consensus 215 ~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~ 294 (372)
T PRK07515 215 ATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRF 294 (372)
T ss_pred cccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 32111 1222221100 00000 0000 000 13578999999999999999999
Q ss_pred eccccchhHHHHHHHH-cCCCC--CCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 326 EINEAFSVVAIANQKL-LGLDP--EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~-lGl~~--~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
.+|+.+......+.+. ||+.. ++.... ...+||+..++-...+.++... .+.|++.+...++.|-++.+++|+
T Consensus 295 ~~Hq~~~~~~d~~~~~llg~~~~~~~~~~~--~~~~GNt~sasi~~~L~~~~~~--~~~Gd~vll~~~G~G~~~~~~ll~ 370 (372)
T PRK07515 295 WLHQANINMNQLIGKKVLGRDATPEEAPVI--LDEYANTSSAGSIIAFHKHSDD--LAAGDLGVICSFGAGYSIGSVIVR 370 (372)
T ss_pred EECCCCHHHHHHHHHHhccCCCChhhceEe--HHhcCCchhhHHHHHHHHHhcc--CCCCCEEEEEEecccHHHHHHHhc
Confidence 9999999988877887 67644 333322 5678999999988888777443 246778888778777787888876
Q ss_pred E
Q 015003 403 L 403 (414)
Q Consensus 403 ~ 403 (414)
+
T Consensus 371 ~ 371 (372)
T PRK07515 371 K 371 (372)
T ss_pred c
Confidence 5
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=201.94 Aligned_cols=251 Identities=20% Similarity=0.149 Sum_probs=185.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.++++++++ +..|..+..++..||++++++++++. ++|++++.||..|..+|+
T Consensus 84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~ 162 (361)
T cd00831 84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLE 162 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHH
Confidence 6899999999999999999999999999998876 66788999999999998668899998 899999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|..+.|||+++|..+.. +
T Consensus 163 ~~~~~~aLvv~~e~~s~~-~------------------------------------------------------------ 181 (361)
T cd00831 163 ANPGARVLVVSTELCSLW-Y------------------------------------------------------------ 181 (361)
T ss_pred HCCCCEEEEEEeecccce-e------------------------------------------------------------
Confidence 999999999999997751 0
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++++ + .-+....+.+||||+|+||++.+
T Consensus 182 --------------------------------~~~d-----~---------------~~~~~~~~lfGDgaaA~ll~~~~ 209 (361)
T cd00831 182 --------------------------------RGPD-----H---------------RSMLVGNALFGDGAAAVLLSNDP 209 (361)
T ss_pred --------------------------------CCCC-----c---------------HHHhhhhhhccCCceEEEEEcCC
Confidence 0000 0 00000112379999999999865
Q ss_pred HHHHcCCcceEEEEEEEE--------------eec------CCCcc---ccchHHHHHHHHHHc--CCCCCCCceeeccc
Q 015003 275 KALELGLQVIAKIRGFAD--------------AAQ------APEWF---TTAPSLAIPKAIANA--GLEASQIDYYEINE 329 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~--------------~~~------~~~~~---~~~~~~a~~~al~~a--Gl~~~DId~~~~hd 329 (414)
..... ......+.+... ... ++..+ .....+.++++|+++ |++.+|||+|.+|+
T Consensus 210 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~ 288 (361)
T cd00831 210 RDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHP 288 (361)
T ss_pred Ccccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECC
Confidence 32100 000011111100 000 00000 012346889999999 99999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
.+......+.+.||++++++..+ -....+||+.++|-...+.+++.+-+.+.+++.+..++|.|-+..++++
T Consensus 289 ~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 289 GGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999886421 1145789999999888888887765556788888877777767766653
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=202.29 Aligned_cols=254 Identities=19% Similarity=0.134 Sum_probs=183.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc-ceeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~-~~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|++++|||.||++++++.+ .|..+.+++..||+++.. ..+.+.++|++++++|..|..+|
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li 184 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLA 184 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999876 688999999999997543 25677789999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.++.|||+++|..|.. +..
T Consensus 185 ~~~~~~~vLVv~~e~~s~~-~~~--------------------------------------------------------- 206 (399)
T PLN03171 185 ENNRGARVLVVAAEITLLL-FNG--------------------------------------------------------- 206 (399)
T ss_pred HhCCCCeEEEEEEeccccc-cCC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+| ++..-+....+.+||||+|+||+..
T Consensus 207 ----------------------------------~d-------------------~~~~~~~v~~~LFGDGAaA~vl~~~ 233 (399)
T PLN03171 207 ----------------------------------PD-------------------EGCFQTLLNQGLFGDGAAAVIVGAD 233 (399)
T ss_pred ----------------------------------CC-------------------cccHHhhhccccccCccEEEEEecC
Confidence 00 0000011123448999999999975
Q ss_pred HHHHHcCCcceEEEEEEEEeecCC--C-------------ccc-cc----hHHHHHHHHHH---------cCCCCCCCce
Q 015003 274 VKALELGLQVIAKIRGFADAAQAP--E-------------WFT-TA----PSLAIPKAIAN---------AGLEASQIDY 324 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~~--~-------------~~~-~~----~~~a~~~al~~---------aGl~~~DId~ 324 (414)
+...+ ++...+.......... . .+. .. ..+.+++++++ +|++.+||++
T Consensus 234 ~~~~~---~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~ 310 (399)
T PLN03171 234 ADAAE---RPLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFW 310 (399)
T ss_pred CCCCC---CCceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceE
Confidence 42111 1112333332211100 0 001 11 12334555554 5888999998
Q ss_pred eeccccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHH--hcCC---CeeEEeecccccceee
Q 015003 325 YEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLR--HKKG---KYGVGGICNGGGGASA 398 (414)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~--~~~~---~~~l~~~~~~gg~~~a 398 (414)
+ +|+.+..+...+.+.||++++++..+ -....+||+.++|-...+.+++++.+ .+.| ++.+...+|.|-++.+
T Consensus 311 ~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~~~ 389 (399)
T PLN03171 311 A-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTVDA 389 (399)
T ss_pred E-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHHHH
Confidence 8 69999999999999999999987531 12456999999999988888887764 2344 6778877787778888
Q ss_pred EEEEEe
Q 015003 399 LVLELM 404 (414)
Q Consensus 399 ~vl~~~ 404 (414)
++|+..
T Consensus 390 ~ll~~~ 395 (399)
T PLN03171 390 MLLHAS 395 (399)
T ss_pred HHhhcc
Confidence 888764
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=227.64 Aligned_cols=229 Identities=17% Similarity=0.249 Sum_probs=181.8
Q ss_pred HHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccc
Q 015003 76 PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML 155 (414)
Q Consensus 76 ~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~ 155 (414)
.+..|+..+|| ++|+++|+++|+|++.||++|++.|++|++|.+||+|++.... |+.+..
T Consensus 185 ~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~~~~~----------------- 244 (2582)
T TIGR02813 185 ISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PFMYMS----------------- 244 (2582)
T ss_pred HHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HHHHHH-----------------
Confidence 56789999999 4899999999999999999999999999999999999998655 432211
Q ss_pred cccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCcccc
Q 015003 156 KDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKF 235 (414)
Q Consensus 156 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~ 235 (414)
|. +.+.++ ++..|+| ||.+
T Consensus 245 ------------fs--------------------------------~~~~lS--------~~g~crp---FD~~------ 263 (2582)
T TIGR02813 245 ------------FS--------------------------------KTPAFT--------TNEDIQP---FDID------ 263 (2582)
T ss_pred ------------HH--------------------------------hccCcC--------CCCCccC---CCCC------
Confidence 00 001111 1345777 7777
Q ss_pred CHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc--c---ccchHHHHHH
Q 015003 236 DAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW--F---TTAPSLAIPK 310 (414)
Q Consensus 236 ~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~--~---~~~~~~a~~~ 310 (414)
++|++ +|||++++||.+.+.|++.|.++|+.|.|++...++... . ..+..+++++
T Consensus 264 -------------adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~ 323 (2582)
T TIGR02813 264 -------------SKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKR 323 (2582)
T ss_pred -------------CCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHH
Confidence 78898 799999999999999999999999999999998875421 1 1234789999
Q ss_pred HHHHcCCCCCCCceeeccccchhH----HH-HHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc--
Q 015003 311 AIANAGLEASQIDYYEINEAFSVV----AI-ANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK-- 380 (414)
Q Consensus 311 al~~aGl~~~DId~~~~hd~~~~~----~~-~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~-- 380 (414)
+|+++|++++||+||+.|-..+.. +. .+.+.||-. ..++.++.-|..+||+.+++|+..++.++++|+.+
T Consensus 324 Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~i 403 (2582)
T TIGR02813 324 AYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVL 403 (2582)
T ss_pred HHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999877743 22 234456543 23577888899999999999999999999999865
Q ss_pred -----------------------------------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 -----------------------------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 -----------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.++.+++.||+++.+||+...
T Consensus 404 Pp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~ 463 (2582)
T TIGR02813 404 PPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYS 463 (2582)
T ss_pred CCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecC
Confidence 0135677889999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=203.61 Aligned_cols=256 Identities=14% Similarity=0.099 Sum_probs=184.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc-ceeeEccCCchHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQS 112 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~-~~~~v~~aC~s~~~al~~A~~~ 112 (414)
+++..+|+.+|+++||+++|++++|||.+|+++++ ++..|..+..++.+||+++.+ .++++..+|++++++|..|..+
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~ 181 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI 181 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence 45778999999999999999999999999998874 667888999999999998654 3799999999999999999999
Q ss_pred HHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHH
Q 015003 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (414)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~ 192 (414)
|++|..+.|||+++|..+... ..
T Consensus 182 ~~~~~~~~vLvv~~e~~s~~~-~~-------------------------------------------------------- 204 (391)
T PLN03169 182 AENNPGSRVLLTTSETTILGF-RP-------------------------------------------------------- 204 (391)
T ss_pred HHhCCCCeEEEEEEEcChhhc-cC--------------------------------------------------------
Confidence 999999999999999975410 00
Q ss_pred hHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeC
Q 015003 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (414)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s 272 (414)
+. . + . +-....++.+||||+|+||+.
T Consensus 205 -------------------~~------------~--~-------------------~--~~d~~~~~lFGDGAaA~vl~~ 230 (391)
T PLN03169 205 -------------------PS------------P--D-------------------R--PYDLVGAALFGDGAAAVIIGA 230 (391)
T ss_pred -------------------CC------------c--c-------------------c--hhhhhhhhhccCceEEEEEec
Confidence 00 0 0 0 000012334899999999997
Q ss_pred HHHHHHcCCcceEEEEEEEEe----ecC-------CCcc----c--------cchHHHHHHHHHHcCCCCCCCc--eeec
Q 015003 273 GVKALELGLQVIAKIRGFADA----AQA-------PEWF----T--------TAPSLAIPKAIANAGLEASQID--YYEI 327 (414)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~----~~~-------~~~~----~--------~~~~~a~~~al~~aGl~~~DId--~~~~ 327 (414)
.+... . ..+...+...+.. +.. ...+ + ....+.++++|+++|++++||| ++.+
T Consensus 231 ~~~~~-~-~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~ 308 (391)
T PLN03169 231 DPIPV-S-ESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAV 308 (391)
T ss_pred CCCcc-c-CCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEe
Confidence 54210 0 0111122221110 000 0000 0 1124678999999999999999 8899
Q ss_pred cccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhc---CCCeeEEeecccccceeeEEEEE
Q 015003 328 NEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHK---KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 328 hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|+.+..+...+.+.||++++++..+ --...+||+..+|-...+.++...-+.+ ++++.+...+|.|-++.+++|+.
T Consensus 309 Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 309 HPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHHHHHhh
Confidence 9999999999999999999887531 1135689999999887777776544322 46777887788777888888765
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.2e-22 Score=192.49 Aligned_cols=258 Identities=21% Similarity=0.192 Sum_probs=192.5
Q ss_pred EeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEcc
Q 015003 18 VGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK 97 (414)
Q Consensus 18 vG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~ 97 (414)
+|+.+..|... +.+..+|+.+|++++|+++|+++++||.+++++..+....+..+.+++..+|++ .++++++++
T Consensus 34 ~gi~~r~~~~~-----~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~ 107 (324)
T cd00827 34 TGIGQRHMAGD-----DEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQ 107 (324)
T ss_pred eecceeEecCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhh
Confidence 56666665443 478999999999999999999999999999998887666777889999999997 689999999
Q ss_pred CCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHH
Q 015003 98 VCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICAN 177 (414)
Q Consensus 98 aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 177 (414)
+|+|++.||..|..+|++|.++++||+++|.++..+. .
T Consensus 108 ~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~--~---------------------------------------- 145 (324)
T cd00827 108 ACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD--E---------------------------------------- 145 (324)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc--C----------------------------------------
Confidence 9999999999999999999999999999999876210 0
Q ss_pred HcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCC
Q 015003 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGN 257 (414)
Q Consensus 178 ~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 257 (414)
.+ .++.+
T Consensus 146 --------------------------------------------------~~-------------------~~~~~---- 152 (324)
T cd00827 146 --------------------------------------------------GS-------------------ALEPT---- 152 (324)
T ss_pred --------------------------------------------------CC-------------------Ccccc----
Confidence 00 11123
Q ss_pred CCcccCceeEEEEeCHHHHHHcCCc-------ce-----EEEEEEEEee-----------cCC--Cccc----cchHHHH
Q 015003 258 ASIISDGAAALVLVSGVKALELGLQ-------VI-----AKIRGFADAA-----------QAP--EWFT----TAPSLAI 308 (414)
Q Consensus 258 ~~~~~DGAaA~vL~s~~~a~~~~~~-------~~-----~~i~g~~~~~-----------~~~--~~~~----~~~~~a~ 308 (414)
+||||+|+||++.+.....+.. +. ....+..... .+. .... .....++
T Consensus 153 ---~gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (324)
T cd00827 153 ---LGDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVV 229 (324)
T ss_pred ---ccCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHH
Confidence 7999999999976531001110 00 0011110000 000 0000 1225788
Q ss_pred HHHHHHcCCCCCCCceeeccccch-hHHHHHHHHcCCCCCCcCCCC--CccccCCCccchHHHHHHHHHHHHHhcCCCee
Q 015003 309 PKAIANAGLEASQIDYYEINEAFS-VVAIANQKLLGLDPEQVNAHG--GAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (414)
Q Consensus 309 ~~al~~aGl~~~DId~~~~hd~~~-~~~~~~~e~lGl~~~~vn~~G--g~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~ 385 (414)
+++|+++|++ +||++|.+|+.+. .....+.+.|+++++++..+- ....+||+..++-.+.+.+++.+-+.+.+++.
T Consensus 230 ~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~v 308 (324)
T cd00827 230 RKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRV 308 (324)
T ss_pred HHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 8999999999 9999999999999 888888999999887777653 36678999999988888888776665667887
Q ss_pred EEeecccccceeeEE
Q 015003 386 VGGICNGGGGASALV 400 (414)
Q Consensus 386 l~~~~~~gg~~~a~v 400 (414)
+....+.|.++.+++
T Consensus 309 l~~~~G~G~~~~~~~ 323 (324)
T cd00827 309 LLFSYGSGFTAEAFV 323 (324)
T ss_pred EEEEeccchhheecc
Confidence 877777777666554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=195.32 Aligned_cols=255 Identities=14% Similarity=0.084 Sum_probs=184.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc-ceeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~-~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
...+|+.+|+++||+++|++++|||.||++++++. ..|..+.+++.+||+++.+ .+++++.+|++++++|..|..+++
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~ 178 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE 178 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999984 4789999999999998644 389999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+++|.+|.. +..
T Consensus 179 ~~~~~~VLVV~~E~~S~~-~~~---------------------------------------------------------- 199 (389)
T PLN03168 179 NNKGARVLAVASEVTAVT-YRA---------------------------------------------------------- 199 (389)
T ss_pred hCCCCEEEEEEEehhhhh-ccC----------------------------------------------------------
Confidence 999999999999998751 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++ ....-++..++++||||+|+||++.+
T Consensus 200 ---------------------------------~~-------------------~~~~~~~~~~~LFGDGAaAvvl~~~~ 227 (389)
T PLN03168 200 ---------------------------------PS-------------------ENHLDGLVGSALFGDGAGVYVVGSDP 227 (389)
T ss_pred ---------------------------------cc-------------------cccHHHHhccccccCccEEEEEecCC
Confidence 00 00000011345589999999999753
Q ss_pred HHHHcCCcceEEEEEEEEe----ecC--CCc-----c------------ccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 275 KALELGLQVIAKIRGFADA----AQA--PEW-----F------------TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~----~~~--~~~-----~------------~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
... . .+++..+...... +++ ... + .......++++++..|+...|+++|.+|+.+
T Consensus 228 ~~~-~-~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg 305 (389)
T PLN03168 228 KPE-V-EKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGG 305 (389)
T ss_pred CCc-c-CCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCc
Confidence 211 0 0111122222111 000 000 0 0112456777778888888888999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeEEEE
Q 015003 332 SVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~vl~ 402 (414)
......+.+.||++++++..+ .-+..+||+..+|-...+.++..+ +.+.+ +.++..++|.|-++.+++|+
T Consensus 306 ~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr 384 (389)
T PLN03168 306 PAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLR 384 (389)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhhhhhhhe
Confidence 999999999999999887532 224568999999988777777654 32222 56777777877788888888
Q ss_pred Eec
Q 015003 403 LMQ 405 (414)
Q Consensus 403 ~~~ 405 (414)
...
T Consensus 385 ~~~ 387 (389)
T PLN03168 385 AAA 387 (389)
T ss_pred ecc
Confidence 743
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-21 Score=191.36 Aligned_cols=255 Identities=17% Similarity=0.117 Sum_probs=184.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
...+|+.+|+++||+++|++++|||.+|++++++. ..|..+.+++.+||+++.+. .+.++.+|++++.+|..|..+++
T Consensus 101 ~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~-~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-cCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 34589999999999999999999999999888874 37889999999999986554 46789999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
++..++|||+++|.+|.. +..
T Consensus 180 ~~~~~~vLVV~~E~~S~~-~~~---------------------------------------------------------- 200 (393)
T PLN03172 180 NNAGSRVLVVCSEITAVT-FRG---------------------------------------------------------- 200 (393)
T ss_pred cCCCCeEEEEEEehhhhh-hcc----------------------------------------------------------
Confidence 999999999999998741 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
+ -+.+ .+ ++-.++++||||+|+||+..+
T Consensus 201 -----------------~-------------~d~~-------~~---------------~~v~~~LFGDGAaAvVl~~~~ 228 (393)
T PLN03172 201 -----------------P-------------SDTH-------LD---------------SLVGQALFGDGAAAVIIGADP 228 (393)
T ss_pred -----------------c-------------cccc-------HH---------------hhhccchhcCceEEEEEecCC
Confidence 0 0000 00 011234489999999998743
Q ss_pred HHHHcCCcceEEEEEEEEee----cC-------CC--cc----------ccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 275 KALELGLQVIAKIRGFADAA----QA-------PE--WF----------TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~----~~-------~~--~~----------~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
... . .++.-.+.+..... ++ .. .+ .....+.++++|++.|++..||++|.+|+.+
T Consensus 229 ~~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg 306 (393)
T PLN03172 229 DTK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGG 306 (393)
T ss_pred CCc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCc
Confidence 211 0 11212344432111 00 00 00 0112467888999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHH-HHhc---CC---CeeEEeecccccceeeEEEEE
Q 015003 332 SVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGV-LRHK---KG---KYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~q-l~~~---~~---~~~l~~~~~~gg~~~a~vl~~ 403 (414)
......+.+.||++++++..+ --+..+||+..+|-...+.++.++ +..+ .+ ++++..++|.|-+..+++|+.
T Consensus 307 ~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 307 PAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 999999999999999876543 235568999888877666666532 2211 12 567888888888889999998
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 387 ~ 387 (393)
T PLN03172 387 V 387 (393)
T ss_pred c
Confidence 5
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=187.51 Aligned_cols=218 Identities=22% Similarity=0.289 Sum_probs=162.1
Q ss_pred cHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccc
Q 015003 75 APARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM 154 (414)
Q Consensus 75 ~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~ 154 (414)
.++.+++..+|++ +|++++..+|+|++.||..|+.+|++|++|+|||+|+|..+. .....
T Consensus 138 ~~a~~ia~~lgl~--Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~--~~~~~---------------- 197 (392)
T PRK09185 138 SLADFLRAYLGLS--GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCR--LTLNG---------------- 197 (392)
T ss_pred HHHHHHHHHhCCC--CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccCh--HHHHH----------------
Confidence 3677899999995 799999999999999999999999999999999999996432 11100
Q ss_pred ccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc
Q 015003 155 LKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK 234 (414)
Q Consensus 155 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~ 234 (414)
+. .. +.+ ....++| |+.+
T Consensus 198 ----------------------------------~~---------~~--~~l---------~~~~~~P---fd~~----- 215 (392)
T PRK09185 198 ----------------------------------FN---------SL--ESL---------SPQPCRP---FSAN----- 215 (392)
T ss_pred ----------------------------------HH---------hc--ccc---------CCCccCC---CcCC-----
Confidence 00 00 000 0123555 5555
Q ss_pred cCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHH
Q 015003 235 FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIP 309 (414)
Q Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~ 309 (414)
++|.+ ++||++++||++++ + . .++|.|++...+... ....+..++++
T Consensus 216 --------------~~G~~-------~gEGaa~vVLe~~~-----~-~-~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~ 267 (392)
T PRK09185 216 --------------RDGIN-------IGEAAAFFLLERED-----D-A-AVALLGVGESSDAHHMSAPHPEGLGAILAMQ 267 (392)
T ss_pred --------------CCccc-------eeceEEEEEEEEcC-----C-C-cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 55666 79999999999861 1 2 268999988766332 11223468999
Q ss_pred HHHHHcCCCCCCCceeeccccchh----HHHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----
Q 015003 310 KAIANAGLEASQIDYYEINEAFSV----VAIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---- 380 (414)
Q Consensus 310 ~al~~aGl~~~DId~~~~hd~~~~----~~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---- 380 (414)
++|+++|++++|||+++.|..++. .+.. +.+.+|- ++.++..|..+||+.+++|+..++.++++|+.+
T Consensus 268 ~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~---~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~ 344 (392)
T PRK09185 268 QALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD---GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPH 344 (392)
T ss_pred HHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC---CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999875 3333 3344552 344667788899999999999999999999864
Q ss_pred -----------------------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 -----------------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 -----------------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+.++++.||+++++||+..|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~~ 392 (392)
T PRK09185 345 GWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRAD 392 (392)
T ss_pred CCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeCC
Confidence 1245678889999999999998764
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=195.08 Aligned_cols=257 Identities=15% Similarity=0.104 Sum_probs=184.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc-ceeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~-~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
...+|+.+|+++||+++|++++|||.+|++++++. ..|..+.+|+.+||+++.+ .+++++.+|++++.+|..|..+++
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999888763 4788999999999998654 378999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
++..++|||+++|..|..-..
T Consensus 184 ~~~~~~vLVV~~E~~S~~~~~----------------------------------------------------------- 204 (401)
T PLN03170 184 NNRGARVLVVCSEITAVTFRG----------------------------------------------------------- 204 (401)
T ss_pred cCCCCeEEEEEEehhhhccCC-----------------------------------------------------------
Confidence 999999999999998751000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
| ++ + . +-....++++||||+|+||+..+
T Consensus 205 -----------------~----------------~~-----~------------~--~~~~~~~~LFGDGAaAvVl~~~~ 232 (401)
T PLN03170 205 -----------------P----------------SE-----S------------H--LDSMVGQALFGDGAAAVIVGADP 232 (401)
T ss_pred -----------------c----------------cc-----c------------h--hhhhhhhhhhhceeEEEEEecCC
Confidence 0 00 0 0 00001233489999999999753
Q ss_pred HHHHcCCcceEEEEEEEEeec----C--CCc---c--------------ccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 275 KALELGLQVIAKIRGFADAAQ----A--PEW---F--------------TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~----~--~~~---~--------------~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
... . ..+..++.+...... + ... . .......++++|+++|++.+||+++.+|+.+
T Consensus 233 ~~~-~-~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg 310 (401)
T PLN03170 233 DER-V-ERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGG 310 (401)
T ss_pred ccc-c-cCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCc
Confidence 211 0 111112332211100 0 000 0 0112468889999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHH-Hhc---CC---CeeEEeecccccceeeEEEEE
Q 015003 332 SVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVL-RHK---KG---KYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql-~~~---~~---~~~l~~~~~~gg~~~a~vl~~ 403 (414)
......+.+.||++++++..+ --...+||+..+|-...+.++.+.. +.+ .+ ++++..++|.|-+..+++|+.
T Consensus 311 ~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 311 PAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence 999999999999999886421 2245689999999777777765432 111 23 567887778877888999998
Q ss_pred ecc
Q 015003 404 MQA 406 (414)
Q Consensus 404 ~~~ 406 (414)
...
T Consensus 391 ~~~ 393 (401)
T PLN03170 391 VPI 393 (401)
T ss_pred ccc
Confidence 544
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-21 Score=191.29 Aligned_cols=254 Identities=17% Similarity=0.141 Sum_probs=180.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc-ceeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV-VCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~-~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
...+|+.+|+++||+++|++++|||.+|++++++.. .|..+.+++..||+++.+ ..+.++.+|++++.+|..|..+++
T Consensus 101 ~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 355899999999999999999999999999888743 688999999999998654 356789999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
++..++|||+++|.+|.. +..
T Consensus 180 ~~~~~~vLVV~~E~~S~~-~~~---------------------------------------------------------- 200 (391)
T PLN03173 180 NNKGARVLVVCSEITAVT-FRG---------------------------------------------------------- 200 (391)
T ss_pred hCCCCeEEEEEEehhhhh-hCC----------------------------------------------------------
Confidence 999999999999998741 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
+ -+.+ .-+....+++||||+|+||+.++
T Consensus 201 -----------------~-------------~d~~----------------------~~~~v~~~LFGDGAaAvvl~~~~ 228 (391)
T PLN03173 201 -----------------P-------------SDTH----------------------LDSLVGQALFGDGAAAIIIGSDP 228 (391)
T ss_pred -----------------c-------------cccc----------------------hhhhhhhhhhcCceEEEEEeCCC
Confidence 0 0000 00001234489999999999743
Q ss_pred HHHHcCC-cceEEEEEEEEe----ecC----------------CC---ccccchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 275 KALELGL-QVIAKIRGFADA----AQA----------------PE---WFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 275 ~a~~~~~-~~~~~i~g~~~~----~~~----------------~~---~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
.. +. ++.-.+.+.... +++ +. .........++++|+++|++.+|||+|.+|+.
T Consensus 229 ~~---~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg 305 (391)
T PLN03173 229 VL---GVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG 305 (391)
T ss_pred CC---CcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCC
Confidence 21 11 111133222210 000 00 00012246888999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhc------CC-CeeEEeecccccceeeEEEE
Q 015003 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHK------KG-KYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~------~~-~~~l~~~~~~gg~~~a~vl~ 402 (414)
+......+.+.||++++++..+ --+..+||+..+|-...+.++.++-... .+ ++++..++|.|=+..+++|+
T Consensus 306 g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~ 385 (391)
T PLN03173 306 GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLH 385 (391)
T ss_pred cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHh
Confidence 9999999999999999876532 2245689999999777777776431111 12 56777777777676677776
Q ss_pred Ee
Q 015003 403 LM 404 (414)
Q Consensus 403 ~~ 404 (414)
..
T Consensus 386 ~~ 387 (391)
T PLN03173 386 SV 387 (391)
T ss_pred hc
Confidence 54
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-20 Score=185.83 Aligned_cols=256 Identities=15% Similarity=0.079 Sum_probs=186.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I~ 114 (414)
-.......|++++|+++|++|+|||.+|+. ++++...|..+.+|+.++|+++++.+++++ +||++++.+|..|..+++
T Consensus 187 ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 187 EAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 345567778899999999999999999985 667667899999999999998788999998 899999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
++..++|||+++|..+...+
T Consensus 266 ~~~~~~aLVVstE~~S~~~y------------------------------------------------------------ 285 (521)
T PLN02854 266 ANPNSYAVVVSTENITLNWY------------------------------------------------------------ 285 (521)
T ss_pred hCCCCeEEEEEEeeeecCCC------------------------------------------------------------
Confidence 99999999999999873100
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
...| .-++..+++++|||+|+||++.+
T Consensus 286 -------------------------------~g~D----------------------rs~lv~~~LFgDGAAAvlLs~~~ 312 (521)
T PLN02854 286 -------------------------------FGND----------------------RSMLLCNCIFRMGGAAVLLSNKA 312 (521)
T ss_pred -------------------------------CCCc----------------------hhhhcceeeeccceeEEEEeccc
Confidence 0000 11122355699999999999743
Q ss_pred HHHHc-CCcceEEEEEEEEeecC---------------------CCccc------------cc------------hHHHH
Q 015003 275 KALEL-GLQVIAKIRGFADAAQA---------------------PEWFT------------TA------------PSLAI 308 (414)
Q Consensus 275 ~a~~~-~~~~~~~i~g~~~~~~~---------------------~~~~~------------~~------------~~~a~ 308 (414)
..+.. ..+. ..+...-..+++ .+.+. .+ ....+
T Consensus 313 ~~~~~~k~~L-~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i 391 (521)
T PLN02854 313 RDRKRSKYQL-VHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLV 391 (521)
T ss_pred ccccccchhe-eeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHH
Confidence 11110 0010 111111111110 00000 00 12457
Q ss_pred HHHHHHcCCCC------CCCceeeccccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 309 PKAIANAGLEA------SQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 309 ~~al~~aGl~~------~DId~~~~hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
++.|.++|+++ +|||+|.+|+.+......+.+.||+++ ++...+ +..+||+..+|-...+.++...-+.
T Consensus 392 ~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~t--L~rfGNTSSASI~~~L~~~~~kGri 469 (521)
T PLN02854 392 RRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMT--LHRFGNTSSSSLWYELAYTEAKGRV 469 (521)
T ss_pred HHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHH--hhhcCChHhhHHHHHHHHHHHcCCC
Confidence 78888999987 699999999999999999999999984 444333 5678999988877777777766555
Q ss_pred cCCCeeEEeecccccceeeEEEEEeccee
Q 015003 380 KKGKYGVGGICNGGGGASALVLELMQAVR 408 (414)
Q Consensus 380 ~~~~~~l~~~~~~gg~~~a~vl~~~~~~~ 408 (414)
++|++.+..++|.|-...+++++....+.
T Consensus 470 k~GD~Vl~iaFGsGft~~sav~~~~~~~~ 498 (521)
T PLN02854 470 SAGDRVWQIAFGSGFKCNSAVWKALREIP 498 (521)
T ss_pred CCCCEEEEEEEchhhhhhheeeEEeccCC
Confidence 67888888888888888899998877654
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=183.57 Aligned_cols=258 Identities=16% Similarity=0.081 Sum_probs=182.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I 113 (414)
....+++..|+++||+++|++|+|||.+|+ ++++....|..+.+|+.+||+++++.+++++ +||++++.+|..|..++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 467889999999999999999999999988 6777767899999999999998789999999 79999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
+++...+|||+++|..|.. +..
T Consensus 249 ~~~~~~~aLVVstE~~S~~-~~~--------------------------------------------------------- 270 (502)
T PLN02377 249 QVHRNTYAVVVSTENITQN-WYF--------------------------------------------------------- 270 (502)
T ss_pred HcCCCCEEEEEEEeccccc-cCC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
. | + .-.+.-.++++|||+|+||++.
T Consensus 271 -------------~---------------------d-------------------~--~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 271 -------------G---------------------N-------------------K--KSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred -------------C---------------------C-------------------C--ccccccceeeccccEEEEEecc
Confidence 0 0 0 0011134568999999999974
Q ss_pred HHHHHcCCcceEEEEEEEEeecC--------C-Cccc--------cch--------------------------------
Q 015003 274 VKALELGLQVIAKIRGFADAAQA--------P-EWFT--------TAP-------------------------------- 304 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~--------~-~~~~--------~~~-------------------------------- 304 (414)
...++.....+..+......+++ + +..+ .-+
T Consensus 296 ~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~ 375 (502)
T PLN02377 296 SRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLV 375 (502)
T ss_pred cccccccccccceEEEEEEEEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 22111100011112222211111 0 0000 000
Q ss_pred -HHHHHHHHHHcC-CCCCCCceeeccccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 -SLAIPKAIANAG-LEASQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 -~~a~~~al~~aG-l~~~DId~~~~hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.+.+++.++..+ ...+|||+|.+|+.+......+.+.||+++ ++...+ +..+||+..+|-...+.++..+-+.
T Consensus 376 ~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~t--L~r~GNTSSaSI~~aL~~~~~~gri 453 (502)
T PLN02377 376 VKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMT--LHRFGNTSSSSIWYELAYIEAKGRM 453 (502)
T ss_pred HHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHH--HHhcCCchhhHHHHHHHHHHHcCCC
Confidence 012223333332 346899999999999999999999999986 444333 4568999888877777777666555
Q ss_pred cCCCeeEEeecccccceeeEEEEEeccee
Q 015003 380 KKGKYGVGGICNGGGGASALVLELMQAVR 408 (414)
Q Consensus 380 ~~~~~~l~~~~~~gg~~~a~vl~~~~~~~ 408 (414)
++|++.+..++|.|-...+++++....+.
T Consensus 454 k~Gd~VlliaFGsGf~~~s~v~~~~~~~~ 482 (502)
T PLN02377 454 RKGNRVWQIAFGSGFKCNSAVWEALRHVK 482 (502)
T ss_pred CCCCeEEEEEEccccEeeeEEEEEecCCC
Confidence 67888787777777788899998876644
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.6e-19 Score=174.57 Aligned_cols=248 Identities=16% Similarity=0.102 Sum_probs=175.3
Q ss_pred EEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE
Q 015003 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI 95 (414)
Q Consensus 16 ~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v 95 (414)
++.|.+++.+.... ++++..+|+.+|+++||+++ ++++||.+++++.++....+..+..++..||+++.++++++
T Consensus 31 ~~~g~G~~~~~~~~---~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv 105 (379)
T TIGR01835 31 FHIGIGQKKMAVPP---IDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFEL 105 (379)
T ss_pred HHhhcCceEEeeCC---CCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEe
Confidence 55677766665443 35788999999999999998 89999999999999887778899999999999867899999
Q ss_pred ccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 96 ~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
.++|.+++.||..|..+|++|..+.|||+++|.....+
T Consensus 106 ~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~~------------------------------------------ 143 (379)
T TIGR01835 106 KQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYGL------------------------------------------ 143 (379)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhccc------------------------------------------
Confidence 99999999999999999999999999999999743200
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTA 255 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (414)
- + ..-++
T Consensus 144 --------------------------------------------------~--~-------------------~~~~~-- 150 (379)
T TIGR01835 144 --------------------------------------------------E--S-------------------PGEPT-- 150 (379)
T ss_pred --------------------------------------------------C--C-------------------CCCcc--
Confidence 0 0 00011
Q ss_pred CCCCcccCceeEEEEeCHHHHHHcCCcceEEEE-EEEEeecC------CCc--cc------------cchHHHHHHHHHH
Q 015003 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIR-GFADAAQA------PEW--FT------------TAPSLAIPKAIAN 314 (414)
Q Consensus 256 ~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~-g~~~~~~~------~~~--~~------------~~~~~a~~~al~~ 314 (414)
+||||+|+||..++. + ..+. +....+++ |.. .. .....++++.+++
T Consensus 151 -----~GdGA~A~Ll~~~~~-------i-~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~ 217 (379)
T TIGR01835 151 -----QGAGAVAMLVSADPK-------L-LAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKR 217 (379)
T ss_pred -----ccCccEEEEEecCCC-------e-eEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999986421 1 1111 11111111 100 00 0124788899999
Q ss_pred cCCCCCCCceeeccccchhHHHH----HHHHcCCCCC-CcCC----C-CCccccCCCccchHHHHHHHHHHHH-HhcCCC
Q 015003 315 AGLEASQIDYYEINEAFSVVAIA----NQKLLGLDPE-QVNA----H-GGAVSLGHPLGCSGARILVTLLGVL-RHKKGK 383 (414)
Q Consensus 315 aGl~~~DId~~~~hd~~~~~~~~----~~e~lGl~~~-~vn~----~-Gg~~~~Gh~~gasG~~~l~~~~~ql-~~~~~~ 383 (414)
+|++++|||++.+|++|..+.+. .++.++++.+ ++.. + --...+||+..+|-...+.+++..- +.++|+
T Consensus 218 ~g~~~~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd 297 (379)
T TIGR01835 218 TGLSLADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGD 297 (379)
T ss_pred hCCCHHHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCC
Confidence 99999999999999999887543 3444555421 1110 0 0123589999999888888777643 345677
Q ss_pred eeEEeecccccce
Q 015003 384 YGVGGICNGGGGA 396 (414)
Q Consensus 384 ~~l~~~~~~gg~~ 396 (414)
+.+..+.|.|...
T Consensus 298 ~ill~s~GsG~~a 310 (379)
T TIGR01835 298 KIGLFSYGSGAVA 310 (379)
T ss_pred EEEEEEecCCcce
Confidence 7776656555543
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-18 Score=191.08 Aligned_cols=265 Identities=26% Similarity=0.290 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHHcCCCccccC----eEEEEeecCCCCCC-------------------cHHHHHHHHCCCCCCcceeeEc
Q 015003 40 LGSIAIECALKRANVKPLLVQ----EVFFGNVLSANLGQ-------------------APARQAALGAGIPNSVVCTTIN 96 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~~~-------------------~~a~~va~~lgl~~~~~~~~v~ 96 (414)
|..+.+.+||||||+.++.+. .|+.|....++... ..+..++..|++ .+|.+.|+
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcccc
Confidence 999999999999999999888 47777776665221 156788999999 48999999
Q ss_pred cCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHH
Q 015003 97 KVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICA 176 (414)
Q Consensus 97 ~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 176 (414)
++|+|++.|+++|++.|++|++|.+|++|+..... |..... +.
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~-p~~~~~------~~------------------------------ 214 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLS-PESSYL------FS------------------------------ 214 (1061)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccC-Ccceee------ee------------------------------
Confidence 99999999999999999999999999999988766 311100 00
Q ss_pred HHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccC
Q 015003 177 NKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAG 256 (414)
Q Consensus 177 ~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 256 (414)
..+.+ .+++.|++ |+++ .+|++
T Consensus 215 -------------------------~~g~l--------s~~g~c~~---fd~~-------------------adG~v--- 236 (1061)
T COG3321 215 -------------------------AGGML--------SPDGRCKA---FDAD-------------------ADGYV--- 236 (1061)
T ss_pred -------------------------cccCc--------CCCCccee---cccC-------------------CCCEE---
Confidence 00111 12566666 7776 77888
Q ss_pred CCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 257 NASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 257 ~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
.++|++++||...+.|.+.|.++|+.|+|.+...++... ...+..++++++|+++|+++++|+|+|.|-..
T Consensus 237 ----~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTG 312 (1061)
T COG3321 237 ----RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTG 312 (1061)
T ss_pred ----EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCC
Confidence 699999999999999999999999999999998876332 11345789999999999999999999999876
Q ss_pred hhH----H-HHHHHHcCCC--CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc------------------------
Q 015003 332 SVV----A-IANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK------------------------ 380 (414)
Q Consensus 332 ~~~----~-~~~~e~lGl~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~------------------------ 380 (414)
+.. + ..+.+.++-. ..++-+.+-|.++||+..|.|+..+++.+++|+.+
T Consensus 313 T~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v 392 (1061)
T COG3321 313 TPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVV 392 (1061)
T ss_pred CCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEe
Confidence 643 1 2223334422 44677788899999999999999999999999976
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..+|.-+.+++.||+++=+|||...
T Consensus 393 ~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 393 PTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred ecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 1345557788999999999998654
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-19 Score=180.57 Aligned_cols=95 Identities=11% Similarity=0.116 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I~ 114 (414)
...+|+.+|+++||+++|++|+|||.+|+.++++. ..|..+.+|+.+||+++++..++++ +||++++.+|..|.++++
T Consensus 147 ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 147 ETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 37789999999999999999999999999998886 6888999999999998789999999 999999999999999999
Q ss_pred cCCCCeEEEEecccCCC
Q 015003 115 LGINDIVVAGGMESMSN 131 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (414)
++....|||+++|.+|.
T Consensus 226 ~~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 226 VHRNTYALVVSTENITQ 242 (478)
T ss_pred cCCCCeEEEEEEeeccc
Confidence 99999999999999886
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-18 Score=173.53 Aligned_cols=252 Identities=16% Similarity=0.089 Sum_probs=174.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I~ 114 (414)
...++...|+++||+++|++|+|||.+|+. +++....|..+..|+.++|+++++.+++++ +||++++.+|..|.++++
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 466789999999999999999999999986 446566889999999999998678999999 799999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
++....|||+++|.+|...+ . +
T Consensus 254 a~~~~~aLVVstE~~S~n~y-~---------g------------------------------------------------ 275 (511)
T PLN02192 254 VHPNSYALVISMENITLNWY-F---------G------------------------------------------------ 275 (511)
T ss_pred cCCCCeEEEEEEEeccccCC-C---------C------------------------------------------------
Confidence 99999999999999873100 0 0
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
.| .-+....|+++|||+|+||++..
T Consensus 276 ---------------------------------~d----------------------rs~lv~n~LFgDGAaAvLLs~~~ 300 (511)
T PLN02192 276 ---------------------------------ND----------------------RSMLVSNCLFRMGGAAILLSNKR 300 (511)
T ss_pred ---------------------------------CC----------------------HHHHhccccccccceEEEEeccc
Confidence 00 00111224589999999999743
Q ss_pred HHHHcCCcceEEEEE---EEEeecCC---------Cc---------------cccc------------------------
Q 015003 275 KALELGLQVIAKIRG---FADAAQAP---------EW---------------FTTA------------------------ 303 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g---~~~~~~~~---------~~---------------~~~~------------------------ 303 (414)
..+.. ..+ .+.. .-...++. +. .+..
T Consensus 301 ~~~~~--~k~-~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~ 377 (511)
T PLN02192 301 SDRRR--SKY-QLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFAT 377 (511)
T ss_pred ccccc--ccc-eeeeeEEEEecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEE
Confidence 11111 001 1111 10100000 00 0000
Q ss_pred --hHHHHHHHHHHcCCCC---CCCceeeccccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHHHHHHH
Q 015003 304 --PSLAIPKAIANAGLEA---SQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARILVTLLG 375 (414)
Q Consensus 304 --~~~a~~~al~~aGl~~---~DId~~~~hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (414)
.++..+.+.+ .+.+ ++||+|.+|+.+......+.+.||+++ ++...+ +.-+||+..+|-.+.+.++..
T Consensus 378 m~gr~vfk~~~~--~~~p~~~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~t--L~rfGNTSSaSI~~aL~~~ea 453 (511)
T PLN02192 378 LVGKKLFKMKLK--PYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMT--LYRFGNTSSSSLWYELAYSEA 453 (511)
T ss_pred EcChHHHHHHhh--hccHHHHHhhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHH--HhHcCChHHhHHHHHHHHHHH
Confidence 0011111111 1112 589999999999999999999999997 343332 566899988887777777766
Q ss_pred HHHhcCCCeeEEeecccccceeeEEEEEeccee
Q 015003 376 VLRHKKGKYGVGGICNGGGGASALVLELMQAVR 408 (414)
Q Consensus 376 ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~~~~ 408 (414)
+-+.++|++.+..++|.|-...++|++....+.
T Consensus 454 kgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~ 486 (511)
T PLN02192 454 KGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVN 486 (511)
T ss_pred cCCCCCCCEEEEEEEcchHhhhhhheeeecccC
Confidence 555567888888888888888888888766543
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=158.93 Aligned_cols=239 Identities=23% Similarity=0.205 Sum_probs=162.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I 113 (414)
+....+|+.+|+++||+++|++++|||.+++|.... .+..+..++..||+ |.+++.++|+|++.+|..|..+|
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI 119 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV 119 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999987422 34578889999987 56999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+|+|||+++|..+.+-..
T Consensus 120 ~SG~ad~VLVV~Ssh~S~AErq---------------------------------------------------------- 141 (327)
T TIGR02845 120 DGGFADRVLAATSSHYATAERQ---------------------------------------------------------- 141 (327)
T ss_pred hCCCCCEEEEEEecccchhhhh----------------------------------------------------------
Confidence 9999999999999998762100
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
|+ .|.+ + |.-+...+..++|||+|+||...
T Consensus 142 ------------fr---~p~e----y-------------------------------g~q~~~ta~~tgdGAGA~vl~~~ 171 (327)
T TIGR02845 142 ------------FR---YPTE----Y-------------------------------GVQKPPTAQWTVTGAGAVLLAST 171 (327)
T ss_pred ------------cc---cccc----c-------------------------------ccCCCCeeeEEEcccEEEEEeec
Confidence 00 0000 0 00011123337999999999865
Q ss_pred HHHHH-cCCcceEEEEEEEEeecCCCcccc----chHHHHHHHHHHcCCCCCCCceeeccccchhHHHH---HHHHcCCC
Q 015003 274 VKALE-LGLQVIAKIRGFADAAQAPEWFTT----APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLD 345 (414)
Q Consensus 274 ~~a~~-~~~~~~~~i~g~~~~~~~~~~~~~----~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~---~~e~lGl~ 345 (414)
+.... ...+ .++|..++.. ++.+|+. +..+.+.+-|+..|.+++|.|+|..-|-...-... +++.-|++
T Consensus 172 ~~~~~i~~~t-~gkv~d~g~~--d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~~ 248 (327)
T TIGR02845 172 GGGPRITSAT-IGKVVDYGIT--DPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARVGSEILRKLLKERGYD 248 (327)
T ss_pred CCCCceEEEE-EEEEEecCCC--CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHHHHHHHHHHHHHcCCC
Confidence 31100 0111 2455555543 5666653 34578888999999999999999998887765443 34444654
Q ss_pred CCCcCCCCCcccc---------CCCccchHHHHHHHHHHHHHhcCCCeeEEeec
Q 015003 346 PEQVNAHGGAVSL---------GHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390 (414)
Q Consensus 346 ~~~vn~~Gg~~~~---------Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~ 390 (414)
.+....+=|..-| |--.|+|....--..+.+|+.+..+|-|++..
T Consensus 249 ~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~~~~~g~~~r~l~v~t 302 (327)
T TIGR02845 249 VTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTYGHILKEMLRGKLKKVLVVAT 302 (327)
T ss_pred hhhccccCCeEEEcCCCcccCCCcccchhHHHHHHHHHHHHhcCcceEEEEEEc
Confidence 4321111111111 22235566666667788888888888776543
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=161.36 Aligned_cols=242 Identities=20% Similarity=0.216 Sum_probs=190.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I 113 (414)
+++...|+++|++++|+++++||.+|+.|++|+-+.....-..+..|+..||+++++.++++..+|-++..||.+|..+|
T Consensus 48 ~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v 127 (377)
T COG3425 48 DEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWV 127 (377)
T ss_pred chhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999988777777789999999999988999999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
.+|..+.+||++.|.....|-.
T Consensus 128 ~s~~~~~~LvI~sD~a~~~~~~---------------------------------------------------------- 149 (377)
T COG3425 128 ESGMISYGLVIGADTAQYAPGD---------------------------------------------------------- 149 (377)
T ss_pred HcCCccceEEEeehhhccCCCc----------------------------------------------------------
Confidence 9999999999999986542210
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
..+ +. -|+||+|+|++..
T Consensus 150 -------------------------~~E------------------------------~t-------~GAGavA~lIg~n 167 (377)
T COG3425 150 -------------------------ALE------------------------------YT-------AGAGAVAFLIGKN 167 (377)
T ss_pred -------------------------ccC------------------------------cc-------CCCceEEEEEccC
Confidence 000 11 4999999999863
Q ss_pred HHHHHcCCcceEEEEEEEEeecC-CC-----ccc--------------cchHHHHHHHHHHcCCCCCCCceeeccccchh
Q 015003 274 VKALELGLQVIAKIRGFADAAQA-PE-----WFT--------------TAPSLAIPKAIANAGLEASQIDYYEINEAFSV 333 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~-~~-----~~~--------------~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~ 333 (414)
+ ...+.+.+.+.-+.+ ++ ... .....+++..+++.|++++|+|++.+|++|..
T Consensus 168 ~-------~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k 240 (377)
T COG3425 168 P-------PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK 240 (377)
T ss_pred C-------CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCc
Confidence 2 122344344333322 11 110 12257899999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCcc-ccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 334 VAIANQKLLGLDPEQVNAHGGAV-SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 334 ~~~~~~e~lGl~~~~vn~~Gg~~-~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+....++.+++..+++.++--.. ..|++..+|..+.++.++.+-. ..|+|-+....|.|......-++.
T Consensus 241 ~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v 310 (377)
T COG3425 241 FPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITV 310 (377)
T ss_pred hHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEe
Confidence 99999999999987777654444 5799999999999999888877 678887777666666544333333
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.4e-17 Score=156.83 Aligned_cols=239 Identities=21% Similarity=0.180 Sum_probs=161.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I 113 (414)
+....+|+.+|+++||+++|++++|||.+++|.... .+..+..++..||+ |.+.+.++|+++..+|..|..+|
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~lI 125 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI----PFLGLYGACSTMMESLALGSMLI 125 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHHH
Confidence 568889999999999999999999999999997532 34567788888986 78999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+|+|||++.|..+.+-.-+ ||-.+||..
T Consensus 126 ~SG~ad~VLVV~Ssh~s~aerqf-------------------------------------r~P~eyg~q----------- 157 (337)
T PRK08304 126 DGGFADRVLAATSSHFATAERQF-------------------------------------RFPTEYGGQ----------- 157 (337)
T ss_pred hcCCCCEEEEEEcchhhhhhhhc-------------------------------------cCchhcccc-----------
Confidence 99999999999999988731000 000111111
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+| .. -.. .++||+|+||...
T Consensus 158 ---------------------------rp-----------------------~t---aqw-------tvtGAGA~i~~~~ 177 (337)
T PRK08304 158 ---------------------------RP-----------------------PT---AQW-------TVTGAGAVLLSRE 177 (337)
T ss_pred ---------------------------CC-----------------------Cc---ceE-------EeeccEEEEEecC
Confidence 11 00 011 5899999999864
Q ss_pred HHHHHc-CCcceEEEEEEEEeecCCCcccc----chHHHHHHHHHHcCCCCCCCceeeccccchhHHH---HHHHHcCCC
Q 015003 274 VKALEL-GLQVIAKIRGFADAAQAPEWFTT----APSLAIPKAIANAGLEASQIDYYEINEAFSVVAI---ANQKLLGLD 345 (414)
Q Consensus 274 ~~a~~~-~~~~~~~i~g~~~~~~~~~~~~~----~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~---~~~e~lGl~ 345 (414)
...-.. ..+ .++|..++.. ++.+|+. +..+.+.+-|+..|.+++|.|+|..-|-...-.. .+++.-|++
T Consensus 178 ~~~~~i~~~t-~Gkv~D~g~~--d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~~ 254 (337)
T PRK08304 178 GSGPRITHAT-IGKVVDLGIK--DPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKEEGYD 254 (337)
T ss_pred CCCceEEEEe-EEEEEecCCC--CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHHhCCC
Confidence 210000 011 1344444433 5556653 3457888899999999999999999888776433 344444665
Q ss_pred CCCcCCCCCcccc----------CCCccchHHHHHHHHHHHHHhcCCCeeEEeec
Q 015003 346 PEQVNAHGGAVSL----------GHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390 (414)
Q Consensus 346 ~~~vn~~Gg~~~~----------Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~ 390 (414)
.+....+=|..-| |--.|+|....--..+.+|+.+..+|-|++..
T Consensus 255 ~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~~~~g~~~rvl~v~t 309 (337)
T PRK08304 255 IGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKELQKGKLKRVLVVAT 309 (337)
T ss_pred hhhcccccCeEEeccCCCcccCCCcccchhHHHHHHHHHHHHhcCCceEEEEEEc
Confidence 4322222111111 11235565666667788888888888776544
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.2e-17 Score=162.31 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHH---HHCCCCCCcceeeEccCCchHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAA---LGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va---~~lgl~~~~~~~~v~~aC~s~~~al~~A 109 (414)
++++..+|+++|++++|+++|++|++||.|++++.++....+..+..|+ ..||.+ ++.+|++..+|.+++.||..|
T Consensus 49 ~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~A 127 (459)
T PLN02577 49 DVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTNACYGGTAALLNC 127 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhhhhHHHHHHHHHH
Confidence 5689999999999999999999999999999999999877888888775 567776 689999999999999999999
Q ss_pred HHHHHcCCC--CeEEEEecccCCC
Q 015003 110 AQSIQLGIN--DIVVAGGMESMSN 131 (414)
Q Consensus 110 ~~~I~sG~~--~~vLv~g~e~~s~ 131 (414)
..+|++|.. +.|||+++|..+.
T Consensus 128 ~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 128 VNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred HHHHHcCCCCCCeEEEEEechhhc
Confidence 999999974 9999999998654
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-16 Score=143.01 Aligned_cols=254 Identities=19% Similarity=0.180 Sum_probs=180.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I~ 114 (414)
.+..|.++|.++||+.+++.|+|||.+++.++++ ...|.+-..+..+||++|...-+.+ ..||..+..+|..|+..++
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG-~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTG-LATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCHHHCcEEEEEeecc-ccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 5667999999999999999999999999998887 5577777889999999887766665 5899999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
.....+|||+.+|.+|-.-
T Consensus 154 a~P~~~vlvV~vELCSLt~------------------------------------------------------------- 172 (356)
T COG3424 154 AAPDANVLVVCVELCSLTY------------------------------------------------------------- 172 (356)
T ss_pred hCccceEEEEEeeeeeeee-------------------------------------------------------------
Confidence 9999999999999998620
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
+ +.++ . .++.+ -.+.++||+||+|++.+.
T Consensus 173 -----------------~-------------~~d~-t-----------------~s~lV---gtaLF~DG~AA~vv~gd~ 201 (356)
T COG3424 173 -----------------V-------------FADD-T-----------------KSNLV---GTALFGDGAAAVVVSGDR 201 (356)
T ss_pred -----------------e-------------cCCC-C-----------------cccce---eeeeecCCeeEEEEeccc
Confidence 0 0000 0 00011 334589999999999855
Q ss_pred HHHHcC-Ccce------------EEEEEEEEeecC---------CCccccchHHHHHHHHHHcCCCCCCCceeeccccch
Q 015003 275 KALELG-LQVI------------AKIRGFADAAQA---------PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS 332 (414)
Q Consensus 275 ~a~~~~-~~~~------------~~i~g~~~~~~~---------~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~ 332 (414)
.++... .++. -.+.||.....+ |..........+..+|...|++.+||+.|..|-...
T Consensus 202 ~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~ 281 (356)
T COG3424 202 RAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGP 281 (356)
T ss_pred cccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCc
Confidence 433221 1110 023333332221 111112235788999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 333 VVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 333 ~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
...-+..+.|||+++....+-- +.-+||...+|-+.-+-+.+++- -+.+.+|++.+++-|=+.=.+++..
T Consensus 282 KVida~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w 352 (356)
T COG3424 282 KVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDW 352 (356)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEe
Confidence 9999999999999874333221 33468888888555444444333 3678899987776655444455544
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-14 Score=146.60 Aligned_cols=96 Identities=11% Similarity=0.049 Sum_probs=88.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHC---CCCCCcceeeEccCCchHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGA---GIPNSVVCTTINKVCSSGMKAVMLA 109 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~l---gl~~~~~~~~v~~aC~s~~~al~~A 109 (414)
++++..+|+.+|++++|++++++|++||.|++++.++....+..+..|+..| |.+ ++.++++.++|.++..||..|
T Consensus 46 ~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~AC~G~t~AL~~A 124 (454)
T TIGR01833 46 DREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTNACYGGTAALFNA 124 (454)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccccchhHHHHHHHH
Confidence 4689999999999999999999999999999999999888898999888854 555 689999999999999999999
Q ss_pred HHHHHcCC--CCeEEEEecccC
Q 015003 110 AQSIQLGI--NDIVVAGGMESM 129 (414)
Q Consensus 110 ~~~I~sG~--~~~vLv~g~e~~ 129 (414)
..+|++|. .+.|||+++|..
T Consensus 125 ~~~i~s~~~~~~~aLVV~sDia 146 (454)
T TIGR01833 125 INWIESSSWDGRYALVVAGDIA 146 (454)
T ss_pred HHHHHcCCcCCCeEEEEEeccc
Confidence 99999996 599999999983
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=137.82 Aligned_cols=238 Identities=19% Similarity=0.151 Sum_probs=155.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
....+|+.+|+++||+++|++++|||.+++|+...+ ..++..++..||+ |.+.+.++|+++..+|..|+.+|+
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ---~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ---ITPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC---cCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHHH
Confidence 455689999999999999999999999999988732 3444578888986 469999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+|+|||+.......+-. ++ ||-.+||..
T Consensus 125 SG~Ad~VLavtsSH~~~aEr-------------------qf------------------R~P~eyG~Q------------ 155 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEK-------------------QF------------------RYPTEYGGQ------------ 155 (334)
T ss_pred cCCCCEEEEEeCcccchhhh-------------------hc------------------cCcccccCc------------
Confidence 99999999997776554210 00 000111111
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
|| .. ..++ .-||+|+||....
T Consensus 156 --------------------------rp-----------------------~t-aqwT---------vTgaga~~l~~~~ 176 (334)
T PRK12404 156 --------------------------KP-----------------------PT-AQWT---------VTGAGAAILSKTG 176 (334)
T ss_pred --------------------------CC-----------------------Cc-ccEE---------EEceEEEEEecCC
Confidence 11 11 1112 4589999998642
Q ss_pred H-HHHcCCcceEEEEEEEEeecCCCcccc----chHHHHHHHHHHcCCCCCCCceeeccccchhHHHH---HHHHcCCCC
Q 015003 275 K-ALELGLQVIAKIRGFADAAQAPEWFTT----APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA---NQKLLGLDP 346 (414)
Q Consensus 275 ~-a~~~~~~~~~~i~g~~~~~~~~~~~~~----~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~---~~e~lGl~~ 346 (414)
. .+-...+ .++|..++.. ++.+|+. +..+.+.+-|+..|.+++|.|+|..-|-...-... +++.-|++.
T Consensus 177 ~~~~i~~~T-~Gkv~D~g~~--d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~ 253 (334)
T PRK12404 177 DGPRVTSAT-IGRVVDMGLT--DPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHKHGVKV 253 (334)
T ss_pred CCceEEEEE-EEEEEecCCC--CcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHHcCCCC
Confidence 1 0000011 1344444433 5666653 34578888899999999999999998888765433 344446654
Q ss_pred -CCcCCCCCcccc---------CCCccchHHHHHHHHHHHHHhcCCCeeEEeec
Q 015003 347 -EQVNAHGGAVSL---------GHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390 (414)
Q Consensus 347 -~~vn~~Gg~~~~---------Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~ 390 (414)
+....+=|..-| |--.|+|....--..+.+|+.+..+|-|++..
T Consensus 254 ~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~~~~g~~~rvL~v~T 307 (334)
T PRK12404 254 PEEQFQDCGLLIYREGQPVIAGASGPGCSATVTYGHLLNRMKRGELKRILVVAT 307 (334)
T ss_pred CcccccccCeEEecCCCcccCCCcccchHHHHHHHHHHHHHhcCCceEEEEEEc
Confidence 211122111111 12225565666667788888888888776543
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-15 Score=149.81 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=85.2
Q ss_pred CCCHHHHHHH-HHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEcc-CCchHHHHHHHHHH
Q 015003 34 SVSATKLGSI-AIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINK-VCSSGMKAVMLAAQ 111 (414)
Q Consensus 34 ~~~~~~L~~~-A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~-aC~s~~~al~~A~~ 111 (414)
.....+|++. |+++||+++|++|+|||.+|+ ++++....|..+..++.++|+++++..++++. ||++++.+|..|..
T Consensus 130 ~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 130 ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 4566677766 777889999999999999986 45665567889999999999988899999996 99999999999999
Q ss_pred HHHcCCCCeEEEEecccCCC
Q 015003 112 SIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~ 131 (414)
+++++....|||+++|..+.
T Consensus 209 ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 209 LLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHHhCCCCEEEEEEEecccc
Confidence 99999999999999999875
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.1e-14 Score=147.78 Aligned_cols=265 Identities=19% Similarity=0.175 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-----CC----------cHHHHHHHH----CCCCCCccee
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANL-----GQ----------APARQAALG----AGIPNSVVCT 93 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~-----~~----------~~a~~va~~----lgl~~~~~~~ 93 (414)
...|..|+..+|+-||||+|+++.. +++|...++.. .+ ..-.+.+++ +.+ .+|++
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence 4569999999999999999998875 56665544321 11 122334444 455 48999
Q ss_pred eEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHH
Q 015003 94 TINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAE 173 (414)
Q Consensus 94 ~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 173 (414)
.++.+|+|++.+|..|.+.|++|+||.+||.|+...-+ |...-.
T Consensus 165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk-Pt~slQ----------------------------------- 208 (2376)
T KOG1202|consen 165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK-PTTSLQ----------------------------------- 208 (2376)
T ss_pred hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEec-cchhhH-----------------------------------
Confidence 99999999999999999999999999999999987666 432110
Q ss_pred HHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcc
Q 015003 174 ICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSV 253 (414)
Q Consensus 174 ~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 253 (414)
..+-+.++ +++-|+- ||.. .||+.
T Consensus 209 --------------------------FlRLgmls--------~dGsCka---FDea-------------------gnGY~ 232 (2376)
T KOG1202|consen 209 --------------------------FLRLGMLS--------PDGSCKA---FDEA-------------------GNGYC 232 (2376)
T ss_pred --------------------------HHHhcCcC--------CCCcccc---hhcc-------------------CCcee
Confidence 00001111 1333433 4333 56777
Q ss_pred ccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccc------cchHHHHHHHHHHcCCCCCCCceeec
Q 015003 254 TAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFT------TAPSLAIPKAIANAGLEASQIDYYEI 327 (414)
Q Consensus 254 ~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~------~~~~~a~~~al~~aGl~~~DId~~~~ 327 (414)
| +||.++++|.....|++. |+.|......+|+....+ .-..+-+++.|+++|++|+++-|+|.
T Consensus 233 R-------seg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEA 301 (2376)
T KOG1202|consen 233 R-------SEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEA 301 (2376)
T ss_pred e-------cCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEe
Confidence 4 999999999998887754 677777777776533222 22367899999999999999999999
Q ss_pred cccchhH----HHH-HHHHcC-CCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------------
Q 015003 328 NEAFSVV----AIA-NQKLLG-LDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------------- 380 (414)
Q Consensus 328 hd~~~~~----~~~-~~e~lG-l~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------------- 380 (414)
|-..+.. +.- +.+.|= -..+|+-+..-+.++||+--|||+-.++..+..+..+
T Consensus 302 HGtGTkVGDpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dG 381 (2376)
T KOG1202|consen 302 HGTGTKVGDPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDG 381 (2376)
T ss_pred ccCCCCCCChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccc
Confidence 9776642 111 111111 1124677778889999999999999999999988865
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.|+.--..+++.||.++-+||+.-+.
T Consensus 382 rLkVVd~~lp~~GGivGiNSFGFGGsN~HviLks~~~ 418 (2376)
T KOG1202|consen 382 RLKVVDRPLPWRGGIVGINSFGFGGSNAHVILKSNTK 418 (2376)
T ss_pred eeEEecCCCCccCceeeeeccccCCCceeEEeccCCC
Confidence 11222255688889999999987665
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-12 Score=118.62 Aligned_cols=96 Identities=18% Similarity=0.095 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I 113 (414)
....+|+.+|+++||+++|++++||+++|+.++++ ...|..-.++...|||++++.-+.+ ..||.++..+|..|....
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG-~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTG-IAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSS-SECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCC-cCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 35678999999999999999999999999999988 4578888899999999988776665 599999999999999999
Q ss_pred HcCCCCeEEEEecccCCC
Q 015003 114 QLGINDIVVAGGMESMSN 131 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~ 131 (414)
++..-.+|||+.+|.+|.
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 999999999999999885
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=116.33 Aligned_cols=94 Identities=26% Similarity=0.373 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC-----eEEEEeecCCC------------------------CCCcHHHHHHHHCCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ-----EVFFGNVLSAN------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id-----~vi~g~~~~~~------------------------~~~~~a~~va~~lgl 86 (414)
....|+..++.+||+|||+++.+++ .+++|+..+++ ....++.+++..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 4557999999999999999886443 37778776621 111256789999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
+ +|+++++++|+|++.||..|+.+|++|++|+|||+|+|....
T Consensus 166 ~--G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~ 208 (254)
T PF00109_consen 166 R--GPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS 208 (254)
T ss_dssp ---SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred C--Cccccccccccccccccchhcccccccccccccccccccccc
Confidence 4 899999999999999999999999999999999999996554
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-10 Score=108.57 Aligned_cols=226 Identities=23% Similarity=0.216 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLG 116 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG 116 (414)
-..|..+|++.||++++++++|||.++-|-...+. ..+...+..|++ |-+-+-.+|++...+|..|+.+|..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 35699999999999999999999999998665532 344566667865 67889999999999999999999999
Q ss_pred CCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHh
Q 015003 117 INDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKR 196 (414)
Q Consensus 117 ~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~ 196 (414)
-+++||++.......+ ... + ||-.+||..|
T Consensus 124 ~a~~vla~tSSH~~tA---ERQ----------------f------------------R~P~EyG~Qr------------- 153 (329)
T PF07451_consen 124 FADYVLAATSSHFATA---ERQ----------------F------------------RFPTEYGGQR------------- 153 (329)
T ss_dssp S-SEEEEEEEE-CCHH---HHH----------------T---------------------GGGT----------------
T ss_pred CcceEEEEeccccchh---hhh----------------c------------------cCchhccCCC-------------
Confidence 9999999877665441 000 0 1111222222
Q ss_pred HHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHH
Q 015003 197 GIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKA 276 (414)
Q Consensus 197 a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a 276 (414)
| .. ... ..-||+|+||.+...
T Consensus 154 -------------------------p-----------------------~t-Aqw---------TVTGaGa~il~~~~~- 174 (329)
T PF07451_consen 154 -------------------------P-----------------------PT-AQW---------TVTGAGAAILSKEGS- 174 (329)
T ss_dssp -------------------------------------------------TT---E---------E--EEEEEEEESS---
T ss_pred -------------------------C-----------------------Cc-ccE---------EEeceEEEEEecCCC-
Confidence 1 10 001 255999999997542
Q ss_pred HHcCCcceEEEEEEEEe--ec----CCCcccc----chHHHHHHHHHHcCCCCCCCceeeccccchhHHH---HHHHHcC
Q 015003 277 LELGLQVIAKIRGFADA--AQ----APEWFTT----APSLAIPKAIANAGLEASQIDYYEINEAFSVVAI---ANQKLLG 343 (414)
Q Consensus 277 ~~~~~~~~~~i~g~~~~--~~----~~~~~~~----~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~---~~~e~lG 343 (414)
. .+|.+.... .| ++.+|+. +..+.+.+-|+.-|.+++|.|+|..-|-...-.. .+++.-|
T Consensus 175 -----~--p~It~~T~GkVvD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G 247 (329)
T PF07451_consen 175 -----G--PRITHATIGKVVDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKG 247 (329)
T ss_dssp -----S--EEEEEEE----B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT
T ss_pred -----C--cEEEEEEEEEEEEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHHcC
Confidence 2 344444322 11 4556653 3357788889999999999999999888776433 3455556
Q ss_pred CCCC---------------CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeec
Q 015003 344 LDPE---------------QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGIC 390 (414)
Q Consensus 344 l~~~---------------~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~ 390 (414)
++.. +-...||. -.|+|....--..+.+|+.+..+|-|++..
T Consensus 248 ~~i~~~~~DCG~~iyd~~~Qdv~aGGS-----GcgCSA~V~~g~ll~~l~~g~~krvL~vaT 304 (329)
T PF07451_consen 248 YDISENYNDCGLMIYDPEKQDVHAGGS-----GCGCSAVVLCGYLLPKLRKGELKRVLFVAT 304 (329)
T ss_dssp ---GGGEEEHHHCSS-TT-S--TT-EE-----SHHHHHHHHHHCHHHHHHTTS-SEEEEEEE
T ss_pred CCCccccccCCeEeecCCccccccCCC-----CcchHHHHHHHHHHHHHHcCCceEEEEEEc
Confidence 6543 11122222 125666666677888999888888776543
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.5e-10 Score=107.48 Aligned_cols=95 Identities=20% Similarity=0.187 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I~ 114 (414)
....++..|++++|+++|++|+|||.+|+.++.. ...|..+.+|.+++|+++++..+++ ++||++++.+|+.|.++++
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 3455888999999999999999999999876664 4578889999999999988889987 4899999999999999999
Q ss_pred cCCCCeEEEEecccCCC
Q 015003 115 LGINDIVVAGGMESMSN 131 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (414)
......+||+..|..+.
T Consensus 161 ~~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 161 AHPNSYALVVSTENISA 177 (290)
T ss_pred hCCCcEEEEEEEeeccc
Confidence 99999999999999886
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.2e-09 Score=81.52 Aligned_cols=89 Identities=25% Similarity=0.183 Sum_probs=73.5
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecc
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~ 391 (414)
|+++|++++|||++.+|+.+........+.+|++++++..+ ...+||+..++-...+.++.++-+.+++++.+....+
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~--~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G 78 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDN--LAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFG 78 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T--HHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH--HhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEE
Confidence 68999999999999999999999999999999999887665 4778999999999999998887777788998888888
Q ss_pred cccceeeEEEE
Q 015003 392 GGGGASALVLE 402 (414)
Q Consensus 392 ~gg~~~a~vl~ 402 (414)
.|.+.++++++
T Consensus 79 ~G~~~~~~~~~ 89 (90)
T PF08541_consen 79 AGFSWGAAVLR 89 (90)
T ss_dssp TTTEEEEEEEE
T ss_pred hhheeEEEEEE
Confidence 88889999887
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.4e-08 Score=84.24 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCC--CCcceeeEccCCchHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--NSVVCTTINKVCSSGMKAVMLAAQ 111 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~--~~~~~~~v~~aC~s~~~al~~A~~ 111 (414)
+++...|++.|++++|++.++++++|+.+++|+-+.-...-..+.+++..||++ +.+..+++-.+|-++..||..|..
T Consensus 50 ~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~ 129 (174)
T PF01154_consen 50 DEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVN 129 (174)
T ss_dssp TS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHH
Confidence 579999999999999999999999999999998877656666888999999993 346788999999999999999999
Q ss_pred HHHcCCC--CeEEEEecccC
Q 015003 112 SIQLGIN--DIVVAGGMESM 129 (414)
Q Consensus 112 ~I~sG~~--~~vLv~g~e~~ 129 (414)
+|+++.. +.+||++.|..
T Consensus 130 ~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 130 WVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp HHCSTTSTTEEEEEEEEEEE
T ss_pred HHhcCCCCCCeEEEEecccc
Confidence 9999864 69999999974
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.6e-07 Score=76.94 Aligned_cols=97 Identities=27% Similarity=0.331 Sum_probs=67.5
Q ss_pred eEEEEEEEEeecC-CCc-----cccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HH-HHHHHcCCCC--CCcC
Q 015003 284 IAKIRGFADAAQA-PEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AI-ANQKLLGLDP--EQVN 350 (414)
Q Consensus 284 ~~~i~g~~~~~~~-~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~-~~~e~lGl~~--~~vn 350 (414)
|+.|.|++...+. ... ...+..++++++|+++|++++|||+|+.|-..+.. +. .+.+.++-.. .++.
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 5789999998865 221 12345799999999999999999999999888763 22 2333444332 3588
Q ss_pred CCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 351 AHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 351 ~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
++.-|..+||+.+++|+..++.++++|+.+
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred eeccccccccccccchHHHHHHHHHHHhcC
Confidence 888899999999999999999999999865
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.2e-07 Score=70.75 Aligned_cols=39 Identities=26% Similarity=0.293 Sum_probs=35.2
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
|+++++|++++.+|+.|..+|++|.+++|||+++|..+.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 688999999999999999999999999999999999875
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=4.7e-06 Score=83.70 Aligned_cols=107 Identities=22% Similarity=0.213 Sum_probs=82.9
Q ss_pred CCccc-cCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC----c-----
Q 015003 230 EGLEK-FDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE----W----- 299 (414)
Q Consensus 230 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~----~----- 299 (414)
+++++ ++.+++++++++.+ |++++|||+..||++++++++++.. + .++.|.+....+.. .
T Consensus 191 a~~~~eI~~~~v~~~~~~~d---p~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas~i~dga~a~~~~~~~~ 260 (392)
T COG0183 191 AGFFDEITPEDVLNSPVVAD---PLRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNASGINDGAAALLLMSESK 260 (392)
T ss_pred cCCCCceeeEEecCCceecC---CcccCCCCCChhhhcCceeccccCC---c----eEEEecccccccHHHHHHHhhHHH
Confidence 44334 89999999988877 9999999999999999999987642 1 45666553322111 0
Q ss_pred --cccchHHHHHHHHHHcCCCCC--CCceeeccccchhHHHHHHHHcCCCC
Q 015003 300 --FTTAPSLAIPKAIANAGLEAS--QIDYYEINEAFSVVAIANQKLLGLDP 346 (414)
Q Consensus 300 --~~~~~~~a~~~al~~aGl~~~--DId~~~~hd~~~~~~~~~~e~lGl~~ 346 (414)
.-.....+..++|+.+|+++. ++++.++||+|++..+..+|.|||.+
T Consensus 261 ~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e 311 (392)
T COG0183 261 AKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAE 311 (392)
T ss_pred HHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCcee
Confidence 011234678899999999998 99999999999999999999999987
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.024 Score=55.15 Aligned_cols=110 Identities=13% Similarity=0.105 Sum_probs=80.3
Q ss_pred EEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCC---CCCCcce
Q 015003 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAG---IPNSVVC 92 (414)
Q Consensus 16 ~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lg---l~~~~~~ 92 (414)
|=+|.+++.++--. +.++...|..-+.++++++-.|+++.|..+-+|+-+-.-..-..=..+.+.++ =+ .+..
T Consensus 42 ytIGLGq~~Mgfcs---drEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNt-dIEG 117 (462)
T KOG1393|consen 42 YTIGLGQTQMGFCS---DREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DIEG 117 (462)
T ss_pred eEeccCcceecccC---chhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCC-cccc
Confidence 66777776665322 13568889999999999999999999999999975532212223334445444 22 4678
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCC--CCeEEEEecccC
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGI--NDIVVAGGMESM 129 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~--~~~vLv~g~e~~ 129 (414)
++..++|-+|..||-.|.++|++.. -+.+||+..|..
T Consensus 118 iDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIA 156 (462)
T KOG1393|consen 118 IDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIA 156 (462)
T ss_pred ccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEE
Confidence 8888999999999999999999864 467778777763
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.031 Score=51.35 Aligned_cols=89 Identities=15% Similarity=-0.005 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCC---------------C---------cHHHHHHHHCCCCCCcc
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG---------------Q---------APARQAALGAGIPNSVV 91 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~---------------~---------~~a~~va~~lgl~~~~~ 91 (414)
....|+++++.+++++. .++|.+||++..++... | ..+.+++...+. ..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 67788888888877542 46778999988776311 1 156677887777 479
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
..++..+-.+...||..|..+++.| .+.||++.+|....
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 9999999999999999999999999 99999999998664
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.11 Score=53.63 Aligned_cols=91 Identities=18% Similarity=0.160 Sum_probs=58.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCC--CcCCCCCccccCCCccchHH-HHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGA-RILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG~-~~l~~~~~ql 377 (414)
..+++++|+++|++++|||++... ...+.....+.+++|+.++ .++++ .. |++|. ..+.-+...|
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLs-------gm-GCSggl~aLdlA~~lL 252 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLG-------GM-GCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcc-------cc-hhhhHHHHHHHHHHHH
Confidence 478999999999999999998743 3445567778899998642 33332 22 44444 4444444455
Q ss_pred HhcCCCeeEEee--------------------cccccceeeEEEEE
Q 015003 378 RHKKGKYGVGGI--------------------CNGGGGASALVLEL 403 (414)
Q Consensus 378 ~~~~~~~~l~~~--------------------~~~gg~~~a~vl~~ 403 (414)
+....++.|+.. +..|..++|+||++
T Consensus 253 ~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~ 298 (511)
T PLN02192 253 QVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSN 298 (511)
T ss_pred HcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEec
Confidence 555555554222 23455667888887
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.1 Score=53.61 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=60.7
Q ss_pred HHHHHHHHHHcCCCCCCCceee----ccccchhHHHHHHHHcCCCCC--CcCCCCCccccCCCccchH-HHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYE----INEAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSG-ARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~----~hd~~~~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG-~~~l~~~~~ql 377 (414)
..+++++|+++|++++|||++. ..+.++.....+.++||+.++ ..+++ .. |++| +..+--+...+
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~-------gm-GCSggl~aL~lA~~ll 224 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLG-------GM-GCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEec-------cc-hhhhHHHHHHHHHHHH
Confidence 5799999999999999999997 346777778888999998643 34433 12 4444 44444444445
Q ss_pred HhcCCCeeE--------------------EeecccccceeeEEEEEec
Q 015003 378 RHKKGKYGV--------------------GGICNGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~~~~~l--------------------~~~~~~gg~~~a~vl~~~~ 405 (414)
+....++.| ...+-.|..++|+||++.+
T Consensus 225 ~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 225 QVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred HcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEeccc
Confidence 544444443 2234445566788888743
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.27 Score=49.42 Aligned_cols=96 Identities=20% Similarity=0.100 Sum_probs=63.9
Q ss_pred EEEEEEEEeecCCC---ccccchHHHHHHHHHHcCCCCCCCceeeccccchh-HHHHHHHHcCCCCCCcCCCCCccccCC
Q 015003 285 AKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSV-VAIANQKLLGLDPEQVNAHGGAVSLGH 360 (414)
Q Consensus 285 ~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~-~~~~~~e~lGl~~~~vn~~Gg~~~~Gh 360 (414)
+.|.|++....... ....-..++++++|+++|++++|||.+.+...... ....+.+.||+.+.++. .-+
T Consensus 10 vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~~~-------~~~ 82 (384)
T PRK06158 10 TAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRFVD-------GTM 82 (384)
T ss_pred EEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCeeec-------ccc
Confidence 68888887543221 11122368999999999999999998876433111 12346788998764321 124
Q ss_pred CccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 361 PLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 361 ~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
..|+++...+..+...++.+..+..|+
T Consensus 83 ~g~~s~~~al~~A~~~I~sG~~d~vLV 109 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAGLCDVALI 109 (384)
T ss_pred CccHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 557778888889999999777776665
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.22 Score=51.57 Aligned_cols=91 Identities=21% Similarity=0.237 Sum_probs=57.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCC--CcCCCCCccccCCCccchHHH-HHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql 377 (414)
..+++++|+++|++++|||++.+. ...+.....+.++||+.+. .++++| +|++|.. .+.-+...+
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~g--------mGCsggl~aL~lA~~ll 248 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEeccc--------chhhHHHHHHHHHHHHH
Confidence 479999999999999999999752 2345567778899998753 344431 2444444 444444444
Q ss_pred HhcCCCeeEEe--------------------ecccccceeeEEEEE
Q 015003 378 RHKKGKYGVGG--------------------ICNGGGGASALVLEL 403 (414)
Q Consensus 378 ~~~~~~~~l~~--------------------~~~~gg~~~a~vl~~ 403 (414)
+....++.|+. .+-.|..++|+||++
T Consensus 249 ~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~ 294 (502)
T PLN02377 249 QVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSN 294 (502)
T ss_pred HcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEec
Confidence 54444444411 133455667888886
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.41 Score=45.75 Aligned_cols=48 Identities=17% Similarity=0.213 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeec----cccchhHHHHHHHHcCCCCC--CcCCC
Q 015003 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPE--QVNAH 352 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~----hd~~~~~~~~~~e~lGl~~~--~vn~~ 352 (414)
..+++++|+++|++|+|||++.+ ..+.+...-.+.+++|+..+ ..|++
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLs 141 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLS 141 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeeccc
Confidence 47899999999999999999873 44555666778899999875 34443
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.28 Score=47.54 Aligned_cols=75 Identities=12% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch--hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS--VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~--~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~ 382 (414)
.+++++||+++|++++|||++...+... ...-...+.||++. ..++ .-.++++..+..+...++.+..
T Consensus 55 ~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP~--fdV~--------~ACSTf~~AL~lAa~lI~SG~a 124 (327)
T TIGR02845 55 EDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIPF--LGLY--------GACSTSMETLALGAMLVDGGFA 124 (327)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCCE--EEEe--------ccCHHHHHHHHHHHHHHhCCCC
Confidence 6899999999999999999998655321 12334568888632 2221 2236667777788788887766
Q ss_pred CeeEEee
Q 015003 383 KYGVGGI 389 (414)
Q Consensus 383 ~~~l~~~ 389 (414)
++.|+..
T Consensus 125 d~VLVV~ 131 (327)
T TIGR02845 125 DRVLAAT 131 (327)
T ss_pred CEEEEEE
Confidence 7766544
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.22 Score=43.14 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=70.9
Q ss_pred chHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHHH-Hhc
Q 015003 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGVL-RHK 380 (414)
Q Consensus 303 ~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~ql-~~~ 380 (414)
.....++++|++.|++..|+..+.+|-........+.+.|||+++++..+-- +..+||...+|-+.-+-++.++- +.+
T Consensus 41 ~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g 120 (151)
T PF02797_consen 41 NIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEG 120 (151)
T ss_dssp HHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhc
Confidence 4457888999999999778889999999999999999999999975443321 44579999998665555555422 211
Q ss_pred ------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 ------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 ------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+.++++..+++-|=+--.++|+++
T Consensus 121 ~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 121 APPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp TSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred ccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 135677777777767778888875
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.37 Score=47.26 Aligned_cols=78 Identities=18% Similarity=0.120 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||++..... .......+.+.||+.+.....+ ..+ ..++++..+..+...++
T Consensus 65 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~-----v~~-~C~~~~~al~~A~~~i~ 138 (338)
T PRK09258 65 AIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFD-----VSN-ACLGFLNGMLDAANMIE 138 (338)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceee-----hhh-hhHHHHHHHHHHHHHHH
Confidence 368999999999999999999975322 2233455788899875221111 112 23555556666666666
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..++.|+
T Consensus 139 ~g~~~~~Lv 147 (338)
T PRK09258 139 LGQIDYALV 147 (338)
T ss_pred cCCCCEEEE
Confidence 555565553
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.55 Score=43.72 Aligned_cols=95 Identities=24% Similarity=0.202 Sum_probs=63.7
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+... .....-.+.+.+|+..-+... + ....++++..+..+...++.
T Consensus 12 ~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~------i-~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 12 FEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYS------V-NQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcce------e-ccHhHHHHHHHHHHHHHHHC
Confidence 68899999999999999999985433 233445578888985212111 1 12345667777777778887
Q ss_pred cCCCeeEEeec---ccccceeeEEEEEecc
Q 015003 380 KKGKYGVGGIC---NGGGGASALVLELMQA 406 (414)
Q Consensus 380 ~~~~~~l~~~~---~~gg~~~a~vl~~~~~ 406 (414)
+..++.++..+ ..|...+++||++.+.
T Consensus 85 g~~~~~lv~~~e~~~~gdGAaa~vL~~~~~ 114 (254)
T cd00327 85 GKADIVLAGGSEEFVFGDGAAAAVVESEEH 114 (254)
T ss_pred CCCCEEEEEecceeeecceEEEEEECcHHH
Confidence 76777765543 3455667888887654
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.28 Score=49.35 Aligned_cols=76 Identities=28% Similarity=0.289 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchH-HHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG-ARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG-~~~l~~~~~ql~~ 379 (414)
.+++++||+++|++++|||++.+. +..+.....+.+.||+.+...... ..+. ||+| +..+..+...++.
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~-----d~~~-gC~g~~~aL~~A~~~i~~ 179 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVM-----MYQT-GCFGGASVLRVAKDLAEN 179 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeee-----eeCC-ccHHHHHHHHHHHHHHHh
Confidence 589999999999999999999743 334556777899999876321111 1123 3444 4445555555565
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 180 ~~~~~VL 186 (389)
T PLN03168 180 NKGARVL 186 (389)
T ss_pred CCCCEEE
Confidence 5555544
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.44 Score=47.93 Aligned_cols=98 Identities=19% Similarity=0.203 Sum_probs=63.3
Q ss_pred EEEEEEEEeec-CCC-c--cccchHHHHHHHHHHcCCCCCCCceeecc---ccch---hHHHHHHHHcCCCCCCcCCCCC
Q 015003 285 AKIRGFADAAQ-APE-W--FTTAPSLAIPKAIANAGLEASQIDYYEIN---EAFS---VVAIANQKLLGLDPEQVNAHGG 354 (414)
Q Consensus 285 ~~i~g~~~~~~-~~~-~--~~~~~~~a~~~al~~aGl~~~DId~~~~h---d~~~---~~~~~~~e~lGl~~~~vn~~Gg 354 (414)
+.|.|++.... ... . ...-..++++++|+.+|++++|||.+... |.+. .....+.+.||+.+.+...
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~~--- 81 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLIR--- 81 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceEE---
Confidence 67888887543 111 1 11223689999999999999999988764 2221 1224567889986543211
Q ss_pred ccccCCCccchHHHHHHHHHHHHHhcCCCeeEEee
Q 015003 355 AVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGI 389 (414)
Q Consensus 355 ~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~ 389 (414)
. +..+++|...+..+...++.+..+..|+..
T Consensus 82 ---v-~~~casg~~al~~A~~~I~sG~~~~vLVvg 112 (386)
T PRK08313 82 ---V-HTAGSVGGSTAVVAASLVQSGVYRRVLAVA 112 (386)
T ss_pred ---E-eccCHHHHHHHHHHHHHHHCCCCCEEEEEE
Confidence 1 334567777888888888877677666543
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.37 Score=46.99 Aligned_cols=94 Identities=27% Similarity=0.309 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeec-----cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHH-HH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEI-----NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLG-VL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~-----hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~-ql 377 (414)
..+++++||+.||++++|||++.+ ...|+...-.+.+.||+..-.. |==...++|+.-...... .+
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~a--------fDl~aaCsgf~yaL~~A~~~i 127 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAPA--------FDLQAACSGFLYALSVADGLI 127 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcce--------eechhhhHHHHHHHHHHHHHH
Confidence 368999999999999999999983 3456777777889999875221 111235677775555555 45
Q ss_pred HhcCCCeeEE----------------eecccccceeeEEEEEec
Q 015003 378 RHKKGKYGVG----------------GICNGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~~~~~l~----------------~~~~~gg~~~a~vl~~~~ 405 (414)
+.+..++.|+ +.+..|...+++||+..+
T Consensus 128 ~sG~~k~vLVVg~e~~S~~ld~~dR~t~vlFgDGAgAvvl~~~~ 171 (323)
T COG0332 128 RSGGYKNVLVVGAETLSRILDWTDRDTCVLFGDGAGAVVLEATE 171 (323)
T ss_pred HcCCCCEEEEEehhHhhccCCHhhccceEEEcCCceEEEEecCC
Confidence 5555555542 224455567888888876
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.56 Score=48.83 Aligned_cols=109 Identities=14% Similarity=-0.074 Sum_probs=65.6
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHH-HHHHCCCCCCc-
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQ-AALGAGIPNSV- 90 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~-va~~lgl~~~~- 90 (414)
+.|+|.|++...-.......++.........|+++|++.||++++|||.+-+=.+++ .... ....|||.+..
T Consensus 266 ~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~------~~~~~~~E~LGl~~~g~ 339 (498)
T PRK08257 266 RWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP------SAVQVAARELGLDLDDP 339 (498)
T ss_pred ceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH------HHHHHHHHHcCcCCCCC
Confidence 468999987652211111222333344455799999999999999999986533332 2223 33458875431
Q ss_pred ceeeEc--------cCCchHHHHHHHHHHHHHcCCCCeEEEEecc
Q 015003 91 VCTTIN--------KVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127 (414)
Q Consensus 91 ~~~~v~--------~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e 127 (414)
.-.+++ ...++++..+..+...++....++.|+.+.-
T Consensus 340 ~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~G 384 (498)
T PRK08257 340 RPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTANG 384 (498)
T ss_pred CCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECCC
Confidence 022222 2234466777778888886667888887543
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.37 Score=46.69 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=55.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc--hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~--~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~ 382 (414)
.+++++||+++|++++|||++...+.. .......++.||++- +++ +|-| +++...+..+...++.+..
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipssfvar~LGIP~--~gV------~gAC--STg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTSFAARTLGIPY--LGL------FGAC--STSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHHHHHHHhCCCc--cce------eecC--HHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999975543 122235678899543 222 2233 6677778888888888777
Q ss_pred CeeEEeecccc
Q 015003 383 KYGVGGICNGG 393 (414)
Q Consensus 383 ~~~l~~~~~~g 393 (414)
++.|+..+...
T Consensus 129 d~VLavtsSH~ 139 (334)
T PRK12404 129 KYVLTGASSHN 139 (334)
T ss_pred CEEEEEeCccc
Confidence 77776554443
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.32 Score=44.90 Aligned_cols=76 Identities=24% Similarity=0.164 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCC--CcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++||+++..-.+ .+.....+++.|||.+. ++. .++...+.|+..+..+..-.+
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~-------i~~~GC~gg~~~L~~A~~~~~ 177 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTP-------IFGMGCAGGAAGLRRAKDIAR 177 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEE-------EES-GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEE-------EeccchhhHHHHHHHHHHHHh
Confidence 58899999999999999999985433 33457778999999875 222 223333444444544444455
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
...+.+.|+
T Consensus 178 ~~p~a~VLv 186 (226)
T PF00195_consen 178 ANPGARVLV 186 (226)
T ss_dssp HSTT-EEEE
T ss_pred CCccceEEE
Confidence 555655553
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.48 Score=49.23 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=57.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCC--CcCCCCCccccCCCccchHHH-HHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql 377 (414)
-.+++++|+++|++++|||++... .+.+...-.+.++||+.++ ..+++ . .|++|.. .+.-+...|
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLs-------g-mGCSggl~aL~lA~~lL 264 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLG-------G-MGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecc-------c-chhhhHHHHHHHHHHHH
Confidence 368899999999999999999853 2344556778899998643 23332 1 2455544 444444445
Q ss_pred HhcCCCeeEEe--------------------ecccccceeeEEEEEe
Q 015003 378 RHKKGKYGVGG--------------------ICNGGGGASALVLELM 404 (414)
Q Consensus 378 ~~~~~~~~l~~--------------------~~~~gg~~~a~vl~~~ 404 (414)
+....++.|+. .+-.|..++|+||++.
T Consensus 265 ~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~ 311 (521)
T PLN02854 265 KANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNK 311 (521)
T ss_pred HhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecc
Confidence 54445554421 2334556678888763
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.48 Score=47.70 Aligned_cols=43 Identities=28% Similarity=0.229 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcCCCCCCCceeec----cccchhHHHHHHHHcCCCCC
Q 015003 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPE 347 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~----hd~~~~~~~~~~e~lGl~~~ 347 (414)
.+++++||+++|++++|||++.. ...+......+.+.||+.+.
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~ 153 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSS 153 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCcc
Confidence 58999999999999999998753 22356677778999998763
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.46 Score=47.91 Aligned_cols=76 Identities=22% Similarity=0.219 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCCCCCCceee----ccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHH-HHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYE----INEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA-RILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~----~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~-~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++. ....++.....+.+.||+.+.-.... . .-.||+|. ..+..+...++.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~-----~-~~~gC~g~~~aL~~A~~~~~~ 180 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFM-----M-YQQGCFAGGTVLRLAKDLAEN 180 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEe-----e-eCCchHHHHHHHHHHHHHHHc
Confidence 5799999999999999999876 23346667788899999876421110 1 12244443 344444555555
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 181 ~~~~~vL 187 (393)
T PLN03172 181 NAGSRVL 187 (393)
T ss_pred CCCCeEE
Confidence 5455544
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.75 Score=44.97 Aligned_cols=95 Identities=18% Similarity=0.052 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
..++++++|+++|++++|||.+..... .........+.||+...+... . ....++|+..+..+...++.
T Consensus 55 a~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~~~~------v-~~~Casg~~al~~A~~~i~s 127 (326)
T CHL00203 55 AAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAVAFD------I-TAACSGFILALVTATQFIQN 127 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCceee------e-cccchhHHHHHHHHHHHHHc
Confidence 368999999999999999999975421 112234467888976433211 1 11246667677777777776
Q ss_pred cCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 380 KKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 380 ~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
+..++.|+... ..|...+++||+..+
T Consensus 128 g~~~~~Lvv~~e~~s~~~~~~~~~~~~~fgDga~A~ll~~~~ 169 (326)
T CHL00203 128 GSYKNILVVGADTLSKWIDWSDRKTCILFGDGAGAAIIGASY 169 (326)
T ss_pred CCCCEEEEEEehhhhCcCCcccCCceEEEcceeeEEEEEEcC
Confidence 65555553321 134556788887654
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.65 Score=46.63 Aligned_cols=97 Identities=11% Similarity=0.108 Sum_probs=63.3
Q ss_pred EEEEEEEEeecCC-C--ccccchHHHHHHHHHHcCCCCCCCceeeccccch-----hHHHHHHHHcCCCCCCcCCCCCcc
Q 015003 285 AKIRGFADAAQAP-E--WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDPEQVNAHGGAV 356 (414)
Q Consensus 285 ~~i~g~~~~~~~~-~--~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~-----~~~~~~~e~lGl~~~~vn~~Gg~~ 356 (414)
+.|.|++...-.. . ....-..++++++|+++|++++|||.+.+..... .....+.+.+|+...+...
T Consensus 3 v~IvG~g~t~~~~~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~----- 77 (385)
T PRK12578 3 VAVIGVGNSKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLR----- 77 (385)
T ss_pred eEEEeecccceeecCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeE-----
Confidence 5677777553221 1 1112236899999999999999999987543221 1234467888987533211
Q ss_pred ccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
. +..++||+..+..+...++.+..+..|+.
T Consensus 78 -v-~~~casg~~al~~A~~~I~sG~~~~vLvv 107 (385)
T PRK12578 78 -V-EAMCATGLAASLTAYTAVASGLVDMAIAV 107 (385)
T ss_pred -E-eccCHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 1 34568888889999999997777766643
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.91 Score=45.46 Aligned_cols=76 Identities=17% Similarity=0.174 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+..... +......+...||+.+.+... . +..+++++..+..+...++
T Consensus 67 a~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~------v-~~~Cas~~~al~~A~~~i~ 139 (378)
T PRK06816 67 AAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIEVVS------S-AGVCAAGMMALKYAYLSVK 139 (378)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCceee------e-cCcCHHHHHHHHHHHHHHH
Confidence 368899999999999999998875322 222334456788876533211 2 2235667777777777777
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 140 sg~~~~vL 147 (378)
T PRK06816 140 AGESRNAV 147 (378)
T ss_pred CCCCCEEE
Confidence 66556555
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.81 Score=46.03 Aligned_cols=96 Identities=18% Similarity=0.083 Sum_probs=62.7
Q ss_pred EEEEEEEEeecCCC---ccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCC-CCcCCCCCccccCC
Q 015003 285 AKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP-EQVNAHGGAVSLGH 360 (414)
Q Consensus 285 ~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh 360 (414)
+.|.|.+.+.-... ....-..+++++||+.||++.+|||.+............+.+.||+.+ .++.. -+
T Consensus 6 v~IvG~g~t~~~r~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~~-------v~ 78 (386)
T PRK07855 6 AAIVGIGATEFSKNSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKFFSR-------IH 78 (386)
T ss_pred EEEEEeeecccccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCcceee-------ec
Confidence 67888887432211 111223689999999999999999988652211111234678899865 22111 13
Q ss_pred CccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 361 PLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 361 ~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
..|++|...+..+...++.+..+..|+
T Consensus 79 ~gg~sg~~~~~~A~~~I~sG~~d~vLv 105 (386)
T PRK07855 79 YGGGAACATVQQAAMAVATGVADVVVC 105 (386)
T ss_pred CCcHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 457888888999999998877776664
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.51 Score=45.95 Aligned_cols=75 Identities=19% Similarity=0.148 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc--hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~--~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~ 382 (414)
.+++++||+++|++++|||++...+.. ....-...+.||++- +.+ ++ -+++++..+..+...++.+..
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa--~dV------~g--ACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPF--LGL------YG--ACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcE--EEE------ec--cCHHHHHHHHHHHHHHhcCCC
Confidence 689999999999999999999865432 122334567788621 111 11 235666677777777877766
Q ss_pred CeeEEee
Q 015003 383 KYGVGGI 389 (414)
Q Consensus 383 ~~~l~~~ 389 (414)
++.|+..
T Consensus 131 d~VLVV~ 137 (337)
T PRK08304 131 DRVLAAT 137 (337)
T ss_pred CEEEEEE
Confidence 7666544
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.56 E-value=0.85 Score=45.90 Aligned_cols=96 Identities=19% Similarity=0.121 Sum_probs=63.5
Q ss_pred EEEEEEEEeecCCC---ccccchHHHHHHHHHHcCCCCCCCceeecc-ccchhHHHHHHHHcCCCCCCcCCCCCccccCC
Q 015003 285 AKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQIDYYEIN-EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGH 360 (414)
Q Consensus 285 ~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~aGl~~~DId~~~~h-d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh 360 (414)
+.|.|.+.+.-... ....-..+++++|++.+|++++|||.+... +........+.+.||+.+.++.. .+
T Consensus 7 vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~~~-------v~ 79 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHVDS-------TE 79 (388)
T ss_pred EEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeeecc-------cc
Confidence 67888887632211 112234689999999999999999987652 21111112367899996533222 24
Q ss_pred CccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 361 PLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 361 ~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
..|++|...+.++...++.+..+..|+
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~~d~vLv 106 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGKCSVALI 106 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 568888888999999999876666654
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.52 E-value=1.1 Score=43.90 Aligned_cols=96 Identities=22% Similarity=0.097 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCC-ccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHP-LGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~-~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||++..... .....-.+.+.||+.+..... +... ..++++..+..+...+
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~------~~v~~~C~~~~~al~~a~~~l 129 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPC------FDINSTCLSFITALDTISYAI 129 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceE------EEccchhHHHHHHHHHHHHHH
Confidence 368999999999999999999865321 233445567889987531111 1111 2344444555555555
Q ss_pred HhcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 378 RHKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
+.+..++.|+..+ ..|...+++||+..+
T Consensus 130 ~~g~~~~~Lvv~~e~~s~~~~~~~~~~~~lfGDGAaA~ll~~~~ 173 (329)
T PRK07204 130 ECGRYKRVLIISSEISSVGLNWGQNESCILFGDGAAAVVITKGD 173 (329)
T ss_pred HCCCCCEEEEEEeccccCCCCcccCcceEEEecccEEEEEEEcC
Confidence 5554555553321 123455778888654
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=91.35 E-value=1.2 Score=44.73 Aligned_cols=95 Identities=23% Similarity=0.075 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
..++++++|+++|++++|||++...... ......+.+.||+...+. .+ . +...++++..+..+...++.
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~~-~d-----v-~~~Ca~~~~aL~~A~~~l~~ 172 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNALA-FD-----L-TAACSGFVLGLVTAARFIRG 172 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCce-ee-----c-cccchHHHHHHHHHHHHHHc
Confidence 3689999999999999999998753221 123445778899863221 11 1 12234555556566666665
Q ss_pred cCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 380 KKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 380 ~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
+..++.|+.. ...|...+++||+..+
T Consensus 173 g~~~~vLVv~~e~~s~~~~~~d~~~~~lfGDGAaAvlL~~~~ 214 (379)
T PLN02326 173 GGYKNVLVIGADALSRYVDWTDRGTCILFGDGAGAVVLQACD 214 (379)
T ss_pred CCCCEEEEEEechhcCCCCccccCceEEEcceeEEEEEEEcC
Confidence 5445544222 1334556788888754
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.35 Score=37.61 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=42.9
Q ss_pred HHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE----ccCCchHHHHHHHHHHHHHcCCCCeEEEE
Q 015003 49 LKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQLGINDIVVAG 124 (414)
Q Consensus 49 L~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v----~~aC~s~~~al~~A~~~I~sG~~~~vLv~ 124 (414)
|+++|++++|||.+++-... ......++..+|+++.....++ +.+|++...+|..+...=+-.+-|.+|++
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 68999999999999884322 2344568888999754322222 34555555566555542122245788888
Q ss_pred eccc
Q 015003 125 GMES 128 (414)
Q Consensus 125 g~e~ 128 (414)
++-.
T Consensus 76 ~~G~ 79 (90)
T PF08541_consen 76 GFGA 79 (90)
T ss_dssp EEET
T ss_pred EEEh
Confidence 7754
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=91.25 E-value=1.5 Score=43.01 Aligned_cols=95 Identities=18% Similarity=0.026 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHcCCCCCCCceeec-ccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEI-NEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~-hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.. +.. .......+.+.||+...+. .. ..+ .+++++..+..+...+
T Consensus 57 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~~--~~----v~~-~C~~~~~al~~A~~~l 129 (339)
T PRK06840 57 AIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAWA--FD----IMA-VCASFPIALKVAKDLL 129 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCccc--cc----ccc-cchHHHHHHHHHHHHH
Confidence 368999999999999999998862 211 2222345678899864221 11 122 2355555666666666
Q ss_pred Hh-cCCCeeEEee------------------cccccceeeEEEEEec
Q 015003 378 RH-KKGKYGVGGI------------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~-~~~~~~l~~~------------------~~~gg~~~a~vl~~~~ 405 (414)
+. +..++.|++. ...|...+++||+..+
T Consensus 130 ~~~g~~~~~Lvv~~~~~s~~~~~~~~~~~~~~~~GDgAaA~ll~~~~ 176 (339)
T PRK06840 130 YSDPSIENVLLVGGYRNSDLVDYDNPRTRFMFNFAAGGSAALLKKDA 176 (339)
T ss_pred hcCCCccEEEEEeecccccccCcCCCCeeeeccCCCceeEEEEEecC
Confidence 65 3344444332 1125566788887654
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=91.22 E-value=1.7 Score=43.31 Aligned_cols=52 Identities=21% Similarity=0.180 Sum_probs=35.1
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEE
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~ 64 (414)
+.++|.|++...-.......++.....-...|+++||+++|++++|||.+-+
T Consensus 225 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei 276 (375)
T cd00829 225 RPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAEL 276 (375)
T ss_pred CCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4688999886543332221122123445568999999999999999998755
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=91.18 E-value=1 Score=45.52 Aligned_cols=96 Identities=17% Similarity=0.133 Sum_probs=60.9
Q ss_pred EEEEEEEEeecCC--CccccchHHHHHHHHHHcCCCCCCCceeecccc----c--hhHHHHHHHHcCCCCCCcCCCCCcc
Q 015003 285 AKIRGFADAAQAP--EWFTTAPSLAIPKAIANAGLEASQIDYYEINEA----F--SVVAIANQKLLGLDPEQVNAHGGAV 356 (414)
Q Consensus 285 ~~i~g~~~~~~~~--~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~----~--~~~~~~~~e~lGl~~~~vn~~Gg~~ 356 (414)
+.|.|.+.+.-.. .....-..++++++|+++|++++|||.+..... + ......+.+.||+...+...
T Consensus 6 v~Ivg~~~t~~~r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~----- 80 (399)
T PRK06059 6 VYILGAGMHPWGKWGRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSS----- 80 (399)
T ss_pred EEEEEecccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceec-----
Confidence 5666666542221 111223368999999999999999999874311 1 11223467888986533322
Q ss_pred ccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
-+..+++|+..+..+...++.+..+..|+
T Consensus 81 --v~~~Casg~~al~~A~~~I~sG~~~~vLv 109 (399)
T PRK06059 81 --SYAACASGSQALQSARAQILAGLCDVALV 109 (399)
T ss_pred --ccchhHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 13456788888889999999776666554
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=91.17 E-value=1.2 Score=43.15 Aligned_cols=95 Identities=24% Similarity=0.137 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+..... +......+.+.||+...+... . ...+++|+..+..+...++
T Consensus 55 a~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~~~~------v-~~~C~s~~~al~~A~~~i~ 127 (318)
T TIGR00747 55 GFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIPAFD------L-SAACAGFIYALSVAKQYIE 127 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCcEee------h-hhhhHHHHHHHHHHHHHHH
Confidence 468999999999999999999875322 233345577889986522211 1 1234566667777777777
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.++.. ...|...+++||++.+
T Consensus 128 ~g~~~~~Lvv~~e~~~~~~~~~~~~~~~~~GDGAaA~lL~~~~ 170 (318)
T TIGR00747 128 SGKYKTVLVVGAEKLSSTLDWTDRGTCVLFGDGAGAVVLGESE 170 (318)
T ss_pred cCCCCEEEEEEehhhcCcCCcCCCCeEEEEecceeEEEEeecC
Confidence 66555544222 1123455677887765
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.62 Score=47.10 Aligned_cols=76 Identities=21% Similarity=0.234 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCCCCceeec----cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~----hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql~~ 379 (414)
.+++++||+++|++++|||++.+ ...+......+.+.||+.+.-... +-.-.|++|.. .+..+...++.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~------~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRL------MMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHH------HhhcChhHHHHHHHHHHHHHHHc
Confidence 58999999999999999998752 222556677789999987642101 11233455544 44444444454
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 185 ~~~~~vL 191 (401)
T PLN03170 185 NRGARVL 191 (401)
T ss_pred CCCCeEE
Confidence 4455555
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.13 E-value=1.1 Score=45.14 Aligned_cols=97 Identities=18% Similarity=0.034 Sum_probs=63.1
Q ss_pred EEEEEEEEeecCCC---ccccchHHHHHHHHHHcCCCCCCCceeecc---ccc---hhHHHHHHHHcCCCCCCcCCCCCc
Q 015003 285 AKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQIDYYEIN---EAF---SVVAIANQKLLGLDPEQVNAHGGA 355 (414)
Q Consensus 285 ~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~aGl~~~DId~~~~h---d~~---~~~~~~~~e~lGl~~~~vn~~Gg~ 355 (414)
+.|.|++...-... ....-..++++++|+++|++++|||.+.+. +.+ ......+.+.+|+...+...
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~---- 86 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSR---- 86 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEE----
Confidence 67888876533221 111223689999999999999999998754 222 11233356778876533211
Q ss_pred cccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 356 VSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 356 ~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
. +..++||...+..+...++.+..+..|+.
T Consensus 87 --V-~~~gasG~~al~~A~~~I~sG~ad~vLVv 116 (392)
T PRK06065 87 --V-YVGGATGVMTAIAGWYHVASGLCQKVLAV 116 (392)
T ss_pred --E-ecCchhHHHHHHHHHHHHhCCCCCEEEEE
Confidence 1 33478888889999999998777766643
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.01 E-value=1.2 Score=43.40 Aligned_cols=95 Identities=26% Similarity=0.193 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||++..... .......+.+.||+...+. .... ..+++++..+..+...++
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~~------~~v~-~~C~~~~~al~~A~~~l~ 129 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAAA------FDIN-AACAGFLYGLETANGLIT 129 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcE------EEEC-ccchHHHHHHHHHHHHHH
Confidence 468999999999999999998864322 2334455678899864221 1122 224566666667777777
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||++.+
T Consensus 130 ~g~~~~~Lvv~~e~~s~~~~~~~~~~~~~~GDgAaA~ll~~~~ 172 (325)
T PRK12879 130 SGLYKKVLVIGAERLSKVTDYTDRTTCILFGDGAGAVVLEATE 172 (325)
T ss_pred cCCCCEEEEEEehhhcCcCCccccCceEEEeecceEEEEEecC
Confidence 65555555322 1223455678888755
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.3 Score=43.10 Aligned_cols=43 Identities=26% Similarity=0.254 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc----c-cchhHHHHHHHHcCCCC
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN----E-AFSVVAIANQKLLGLDP 346 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h----d-~~~~~~~~~~e~lGl~~ 346 (414)
..++++++|+++|++++|||++..- | ........+.+.||+.+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~ 103 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQN 103 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCC
Confidence 3689999999999999999999742 2 22334456789999865
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=90.92 E-value=1.4 Score=42.69 Aligned_cols=96 Identities=26% Similarity=0.215 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccc----c-chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINE----A-FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd----~-~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+..-. . .......+.+.||+...+... . ...+++++..+..+...++
T Consensus 54 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~~~~------v-~~~C~s~~~al~~A~~~i~ 126 (320)
T cd00830 54 AVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAAAFD------I-NAACSGFLYGLSTAAGLIR 126 (320)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcEee------c-cccchHHHHHHHHHHHHHH
Confidence 36889999999999999999986422 1 233445577889986322111 1 1234666667777777777
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.++.. ...|...+++||+..+.
T Consensus 127 ~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~GDgAaA~ll~~~~~ 170 (320)
T cd00830 127 SGGAKNVLVVGAETLSRILDWTDRSTAVLFGDGAGAVVLEATEE 170 (320)
T ss_pred cCCCCEEEEEEehhhccccCcccCCceEEEeccceEEEEEecCC
Confidence 66656655332 12344557888887654
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.8 Score=46.12 Aligned_cols=76 Identities=22% Similarity=0.171 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++.+.- .+......+.+.||+.+.... .+=+..|++|.. .+..+...++.
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~d~~~gC~g~~~aL~~A~~~~~~ 184 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQR------VMLYFLGCSGGVAGLRVAKDIAEN 184 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCccee------eecccChhHHHHHHHHHHHHHHHh
Confidence 5899999999999999999876432 344556677899998763211 112234556554 44444444555
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 185 ~~~~~vL 191 (391)
T PLN03169 185 NPGSRVL 191 (391)
T ss_pred CCCCeEE
Confidence 5555555
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.98 Score=45.63 Aligned_cols=76 Identities=25% Similarity=0.281 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeec----cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHH-HHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEI----NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLG-VLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~----hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~-ql~~ 379 (414)
.++++++|+++|++++|||++.+ .+.+......+.+.||+.+...... .-+. |++|......... .++.
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~-----~~~~-gC~g~~~aL~~A~~li~~ 186 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTM-----LHLN-GCFAGAAALRLAKDLAEN 186 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceee-----ccCC-ccHHHHHHHHHHHHHHHh
Confidence 58999999999999999999974 3345666777889999875321011 1122 6666554444433 3444
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 187 ~~~~~vL 193 (399)
T PLN03171 187 NRGARVL 193 (399)
T ss_pred CCCCeEE
Confidence 4444444
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.46 Score=39.16 Aligned_cols=99 Identities=22% Similarity=0.192 Sum_probs=52.3
Q ss_pred EEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEE-EeecCCCCCCcHHHHHHHHCCCCC---Ccce
Q 015003 17 IVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF-GNVLSANLGQAPARQAALGAGIPN---SVVC 92 (414)
Q Consensus 17 ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~-g~~~~~~~~~~~a~~va~~lgl~~---~~~~ 92 (414)
|.|++.+-=+.+.......+...+ .+++++||+++|++|++||.|.. |+.++. ....-..-+...++-.. .++.
T Consensus 4 i~g~~~~~dg~~~~~~~~p~~~~~-~~~i~~al~~agi~~~~I~~i~~hg~Gt~~-~D~~E~~ai~~~~~~~~~~~~~~v 81 (119)
T PF02801_consen 4 IRGYGVNSDGARSSSLTAPNGAAL-ARAIRRALADAGISPEDIDYIEAHGTGTPL-GDAAEAEAIARVFGDSARQQPVPV 81 (119)
T ss_dssp EEEEEEEE-SSSTSSSSSTTHHHH-HHHHHHHHHHHTS-GGGEEEEE----SSHH-HHHHHHHHHHHHHGGGGGTSTSEE
T ss_pred EEEEEEECCCCCCCCCcCcCHHHH-HHHHHHHHhhhccccccceeeeeecccccc-chhhhhhhhhhhhcccccccccce
Confidence 556554433322222222344444 77899999999999999998864 222211 11111222333333210 1333
Q ss_pred eeE-----ccCCchHHHHHHHHHHHHHcCC
Q 015003 93 TTI-----NKVCSSGMKAVMLAAQSIQLGI 117 (414)
Q Consensus 93 ~~v-----~~aC~s~~~al~~A~~~I~sG~ 117 (414)
..+ ...+++++..|..+..+++.|.
T Consensus 82 ~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 82 GSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp E-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred eccccccccccccchHHHHHHHHHHHhcCC
Confidence 322 3467889999999999998874
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.73 E-value=1.2 Score=44.14 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCC
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDP 346 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~ 346 (414)
..++++++|+++|++++|||++.+. ...+.....+.+.||+.+
T Consensus 64 a~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~ 111 (353)
T PRK12880 64 GKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSS 111 (353)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC
Confidence 3689999999999999999999743 334456677789999865
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.65 E-value=1.6 Score=44.60 Aligned_cols=96 Identities=18% Similarity=0.102 Sum_probs=61.9
Q ss_pred EEEEEEEEeecCCC----ccccchHHHHHHHHHHcCCCCCCCceeecccc---ch---hHHHHHHHHcCCCCCCcCCCCC
Q 015003 285 AKIRGFADAAQAPE----WFTTAPSLAIPKAIANAGLEASQIDYYEINEA---FS---VVAIANQKLLGLDPEQVNAHGG 354 (414)
Q Consensus 285 ~~i~g~~~~~~~~~----~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~---~~---~~~~~~~e~lGl~~~~vn~~Gg 354 (414)
+.|.|.+.+--... ....-..++++++|+++|++++|||.+..... +. .....+.+.+|+.+.+...
T Consensus 18 VaIvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~--- 94 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKR--- 94 (430)
T ss_pred EEEEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEE---
Confidence 56777765432211 11123468899999999999999998765322 21 1222346889987633222
Q ss_pred ccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 355 AVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 355 ~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
-+..++||...+..+...++.+..+..|+
T Consensus 95 ----v~~~~aSg~~ai~~A~~~I~sG~~~~vLv 123 (430)
T PRK06365 95 ----IEGGGATGGLAFQAGYEEIASGRMDCVAV 123 (430)
T ss_pred ----EeCCcHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 13457899999999999999876665554
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=90.55 E-value=3.1 Score=40.28 Aligned_cols=96 Identities=19% Similarity=0.202 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+... . +...++|+..+..+...++
T Consensus 52 ~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~~~~------v-~~~C~s~~~al~~A~~~i~ 124 (324)
T cd00827 52 AVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAEAFD------L-KQACYGGTAALQLAANLVE 124 (324)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCceee------h-hhhhHHHHHHHHHHHHHHH
Confidence 368999999999999999999974221 223344567889985211111 1 1223556667777777777
Q ss_pred hcCCCeeEEee---------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI---------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~---------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.++.. ...|...+++||+..+.
T Consensus 125 ~g~~~~vlvv~~e~~~~~~~~~~~~~~~~gdgaaA~ll~~~~~ 167 (324)
T cd00827 125 SGPWRYALVVASDIASYLLDEGSALEPTLGDGAAAMLVSRNPG 167 (324)
T ss_pred cCCCCEEEEEEEHHhhhcccCCCCccccccCceEEEEEecCcc
Confidence 66555554222 23344557788877653
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=90.31 E-value=0.91 Score=46.44 Aligned_cols=75 Identities=17% Similarity=0.258 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCC--CcCCCCCccccCCCccchH-HHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSG-ARILVTLLGV 376 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG-~~~l~~~~~q 376 (414)
...+++++|+++|++++|||++... ...+.....+.+++|+.+. .++++ . +|++| +..+..+...
T Consensus 138 i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~-------g-mGCsggv~aL~lA~~l 209 (466)
T PLN00415 138 IFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS-------G-MGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec-------c-ccchHHHHHHHHHHHH
Confidence 3568999999999999999987632 2334556677889998743 22222 1 23344 4444444445
Q ss_pred HHhcCCCeeE
Q 015003 377 LRHKKGKYGV 386 (414)
Q Consensus 377 l~~~~~~~~l 386 (414)
++.+...+.|
T Consensus 210 l~a~~~~~aL 219 (466)
T PLN00415 210 LKANPNTYAV 219 (466)
T ss_pred HHhCCCCEEE
Confidence 5555455544
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.94 Score=44.76 Aligned_cols=87 Identities=16% Similarity=0.058 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCccee-----eE-ccCCchHHHHHHHHH
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-----TI-NKVCSSGMKAVMLAA 110 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~-----~v-~~aC~s~~~al~~A~ 110 (414)
....+.++++++|+++|++++|||.+++=.. .......++..||+++..-.. ++ +++++|-..+|..+.
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~-----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP-----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC-----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence 4556668899999999999999999877211 222445678889987532221 23 345666666777776
Q ss_pred HHHHcCCCCeEEEEecccCC
Q 015003 111 QSIQLGINDIVVAGGMESMS 130 (414)
Q Consensus 111 ~~I~sG~~~~vLv~g~e~~s 130 (414)
..++.| |.+|++++-...
T Consensus 281 ~~~~~G--d~vll~~~G~G~ 298 (345)
T TIGR00748 281 DIAEPG--DRILAVSYGSGA 298 (345)
T ss_pred HhcCCC--CEEEEEEecCCc
Confidence 655655 577777766543
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.72 E-value=1 Score=44.45 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||++.+..+. ......+.+.||+.+...... . +..+++++..+..+...++
T Consensus 55 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~d-----v-~~~C~~~~~aL~~A~~~i~ 128 (347)
T PRK04262 55 AVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAAD-----L-EFACKAGTAALQAAMGLVK 128 (347)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEE-----H-HHhHHHHHHHHHHHHHHHH
Confidence 3689999999999999999998643221 122334568899864221111 1 1224555666666777777
Q ss_pred hcCCCeeEEeec-------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC-------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~-------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 129 sg~~~~aLVv~~e~~~~~~~~~~~~~~GDGA~A~ll~~~~ 168 (347)
T PRK04262 129 SGMIKYALAIGADTAQGAPGDALEYTAAAGGAAFIIGKEE 168 (347)
T ss_pred cCCCCEEEEEEEeeeccCCCCCCCCcCCCCcEEEEEecCc
Confidence 666666653321 123345677777544
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.6 Score=43.21 Aligned_cols=97 Identities=26% Similarity=0.209 Sum_probs=56.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||++....+ .......+...||+.+.-...+ ..+...++++..+.-+...++.+
T Consensus 90 ~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~d-----v~~~~C~~~~~al~~A~~~~~~~ 164 (361)
T cd00831 90 EEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYN-----LGGMGCSAGAIALDLAKDLLEAN 164 (361)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhc-----cccccchhHHHHHHHHHHHHHHC
Confidence 68999999999999999999875222 2223446678899875311111 11112234444444444455555
Q ss_pred CCCeeEEee--------------------cccccceeeEEEEEecc
Q 015003 381 KGKYGVGGI--------------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 381 ~~~~~l~~~--------------------~~~gg~~~a~vl~~~~~ 406 (414)
..++.|++. +..|...+++||+..+.
T Consensus 165 ~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~ 210 (361)
T cd00831 165 PGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPR 210 (361)
T ss_pred CCCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCC
Confidence 455554222 12345567888887553
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=88.68 E-value=1.8 Score=43.64 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=52.8
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch------hHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS------VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~------~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|+++|++++|||.+.+-..+. .......+.+|+.+ .+.... +..++||+..+..+...+
T Consensus 32 ~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V-------~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 32 ATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNV-------NRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEe-------cccchHHHHHHHHHHHHH
Confidence 6899999999999999999987643221 12233456678863 232111 345678888899999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 105 ~sG~~d~vLv 114 (394)
T PRK09051 105 LLGDADVAIG 114 (394)
T ss_pred HcCCCCEEEE
Confidence 8776666654
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=88.20 E-value=1.8 Score=43.54 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+...+ ......+...+|+.. .+... . +..+++|+..+..+...++
T Consensus 27 ~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~------v-~~~c~s~~~al~~A~~~I~ 99 (386)
T cd00751 27 AAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATT------V-NRVCGSGLQAVALAAQSIA 99 (386)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhh------h-ccccHHHHHHHHHHHHHHH
Confidence 689999999999999999998753221 222334567789864 22211 1 3346778878888888888
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..|+
T Consensus 100 sG~~~~vLv 108 (386)
T cd00751 100 AGEADVVVA 108 (386)
T ss_pred CCCCCeEEE
Confidence 766666554
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=88.16 E-value=1.4 Score=44.57 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-..+ ......+.+.+|+...+... =+..++||+..+..+...++
T Consensus 31 ~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~~-------v~~~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 31 MVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVTR-------VENFCATGSEAFRGAVYAVA 103 (398)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEEE-------EecccHHHHHHHHHHHHHHH
Confidence 3689999999999999999988653211 11124457788986422111 13457899999999999999
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..++
T Consensus 104 sG~~d~vlv 112 (398)
T PRK06157 104 SGAYDIALA 112 (398)
T ss_pred CCCCCEEEE
Confidence 877766553
|
|
| >COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=88.04 E-value=1.8 Score=39.91 Aligned_cols=82 Identities=12% Similarity=-0.008 Sum_probs=56.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I 113 (414)
.....+.....++++|.++|+++.|+|.+.++..-+++.|--++.-++..|.+..+.|.+.|++ |...+...
T Consensus 34 ~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss--------L~~~A~~~ 105 (220)
T COG1214 34 KRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS--------LEALAQGG 105 (220)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH--------HHHHHHhh
Confidence 3467789999999999999999999999999988887766655544444444433567887662 33333334
Q ss_pred HcCCCCeEEE
Q 015003 114 QLGINDIVVA 123 (414)
Q Consensus 114 ~sG~~~~vLv 123 (414)
+......+++
T Consensus 106 ~~~~~~~v~v 115 (220)
T COG1214 106 AEKNAGFVLV 115 (220)
T ss_pred hccCCCceEE
Confidence 4444555555
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=87.91 E-value=2.7 Score=41.88 Aligned_cols=93 Identities=23% Similarity=0.188 Sum_probs=58.9
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc-----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd-----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
..+++++|+++|++++|||.+.... .+......+.+.||+.. +. ... +..+++|+..+..+...++.
T Consensus 100 ~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~~------~~v-~~aCasg~~al~~A~~~i~~ 171 (372)
T PRK07515 100 VAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-FA------FDM-NVACSSATFGIQTAANAIRS 171 (372)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-cE------EEe-cchhHHHHHHHHHHHHHHHc
Confidence 5789999999999999999887532 23333455678888752 11 111 23456777777777777876
Q ss_pred cCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 380 KKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 380 ~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
+..++.|+.. +..|...+++||+..+
T Consensus 172 g~~~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~ 213 (372)
T PRK07515 172 GSARRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERAD 213 (372)
T ss_pred CCCCEEEEEeeecccccccccCCCCCEEecCccEEEEEeecc
Confidence 6555554322 1123455678888754
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=87.55 E-value=2.2 Score=43.79 Aligned_cols=96 Identities=10% Similarity=0.081 Sum_probs=61.8
Q ss_pred EEEEEEEEeecCCC------cc--ccchHHHHHHHHHHcCCCCCCCceeecccc---c---hhHHHHHHHHcCCCC-CCc
Q 015003 285 AKIRGFADAAQAPE------WF--TTAPSLAIPKAIANAGLEASQIDYYEINEA---F---SVVAIANQKLLGLDP-EQV 349 (414)
Q Consensus 285 ~~i~g~~~~~~~~~------~~--~~~~~~a~~~al~~aGl~~~DId~~~~hd~---~---~~~~~~~~e~lGl~~-~~v 349 (414)
++|.|.+.+--... .. ..-..++++++|+++|++++|||.+.+-.. + ........+.+|+.+ .+.
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa 127 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPV 127 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcce
Confidence 67888775432221 01 112368999999999999999998864222 1 112234556778865 221
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
.. . +..++||+..+..+..+++.+..+..|+
T Consensus 128 ~~------V-~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv 158 (452)
T PLN02287 128 RT------V-NRQCSSGLQAVADVAAAIKAGFYDIGIG 158 (452)
T ss_pred EE------E-eccCchHHHHHHHHHHHHHcCCCCeEEE
Confidence 11 1 4457899999999999999777666555
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.31 E-value=1.8 Score=43.68 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch-----hHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~-----~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-..+. .........+|++. .|... . +..++||+..+..+...++
T Consensus 31 ~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~------V-~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 31 GIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTET------V-NKVCASGLRAVTLADQIIR 103 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceee------h-hhhhhHHHHHHHHHHHHHH
Confidence 6899999999999999999997643321 22223467788853 22211 1 3446888889999999999
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..|+
T Consensus 104 sG~~d~vLv 112 (393)
T PRK08235 104 AGDASVIVA 112 (393)
T ss_pred CCCCCEEEE
Confidence 776666554
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.13 E-value=3 Score=42.02 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+...+ ..........+|+.. .+... =+..++||+..+..+...++
T Consensus 31 ~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~-------v~~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 31 AIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALT-------INKVCGSGLKAVALAAQAIR 103 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceee-------ecccchHHHHHHHHHHHHHH
Confidence 689999999999999999998764321 111222334567653 22211 12357788888999999998
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..|+
T Consensus 104 sG~~d~vLv 112 (393)
T PRK05790 104 AGDADIVVA 112 (393)
T ss_pred cCCCCEEEE
Confidence 776666554
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=86.99 E-value=2.1 Score=43.06 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||.+.+...+ ......+...+|+.. .+... . +..+++|+..+..+...+
T Consensus 25 a~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~------v-~~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 25 GAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYT------V-NRQCASGLQAVILAAQLI 97 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeee------e-cchhhHHHHHHHHHHHHH
Confidence 3689999999999999999998753321 222334567788864 22211 1 234678888888888888
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 98 ~sG~~~~vLv 107 (386)
T TIGR01930 98 RAGEADVVVA 107 (386)
T ss_pred HCCCCCEEEE
Confidence 8766666654
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=86.96 E-value=5.2 Score=38.78 Aligned_cols=78 Identities=15% Similarity=-0.072 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce-----eeEccCCchHHHHHHHHHHH
Q 015003 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC-----TTINKVCSSGMKAVMLAAQS 112 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~-----~~v~~aC~s~~~al~~A~~~ 112 (414)
.+...++++++|+++|+.++|||.++.-...................+.. ..+. ..=+..++++...|..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHHH
Confidence 35566899999999999999999988644332221111111122222211 0111 11245567788888888888
Q ss_pred HHcC
Q 015003 113 IQLG 116 (414)
Q Consensus 113 I~sG 116 (414)
.+.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 8877
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.92 E-value=1.9 Score=43.58 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-..+ ......+...+|+.+ .|... . +..++||+..+..+...++
T Consensus 31 ~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~------V-~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 31 ATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQ------L-DRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceee------h-hhhhhHHHHHHHHHHHHHH
Confidence 689999999999999999998743321 122334567788764 22211 1 3456889989999999999
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..|+
T Consensus 104 sG~~d~vLv 112 (404)
T PRK06205 104 TGAADVVIA 112 (404)
T ss_pred cCCCCEEEE
Confidence 776665554
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=85.84 E-value=3.8 Score=41.10 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
..+++++|+++ +++|||.+..- +........+.+.||+.+...... ..+ ..++|+..+..+...+..
T Consensus 54 ~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~d-----v~~-aC~gg~~aL~~A~~~i~s 125 (379)
T TIGR01835 54 ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFE-----LKQ-ACYGATAALQMAKGHVAL 125 (379)
T ss_pred HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEE-----ecc-ccHHHHHHHHHHHHHHHc
Confidence 68899999998 89999999743 333455666788899865211111 111 124444455555555665
Q ss_pred cCCCeeEEeec-------------ccccceeeEEEEEecc
Q 015003 380 KKGKYGVGGIC-------------NGGGGASALVLELMQA 406 (414)
Q Consensus 380 ~~~~~~l~~~~-------------~~gg~~~a~vl~~~~~ 406 (414)
+..++.|+... ..|...+|+||+..+.
T Consensus 126 ~~~~~aLVv~~D~a~~~~~~~~~~~~GdGA~A~Ll~~~~~ 165 (379)
T TIGR01835 126 SPDRKVLVIASDIAKYGLESPGEPTQGAGAVAMLVSADPK 165 (379)
T ss_pred CCCCeEEEEEeehhhcccCCCCCccccCccEEEEEecCCC
Confidence 55566653331 2344556788876543
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=84.95 E-value=3.5 Score=39.96 Aligned_cols=95 Identities=24% Similarity=0.156 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
...+++++|+++|++++|||.+.+... .......+.+.+|+...+... .. ..+++|+..+..+...++
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~~~~------v~-~~Casg~~al~~A~~~i~ 128 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAAAFD------LS-AACSGFVYALSTADQFIR 128 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCcEee------cc-ccchhHHHHHHHHHHHHH
Confidence 468999999999999999998865322 223344567889985423211 11 235677777777878787
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..+..++.. ...|...+++||++.+
T Consensus 129 ~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~gDGaaA~ll~~~~ 171 (319)
T PRK09352 129 SGAYKNVLVIGAEKLSRIVDWTDRSTCVLFGDGAGAVVLGASE 171 (319)
T ss_pred cCCCCEEEEEEehhhccccCcccCCceEEEeccceEEEEEEcC
Confidence 66555544322 1223445677887764
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.93 E-value=2.8 Score=42.24 Aligned_cols=76 Identities=17% Similarity=0.165 Sum_probs=53.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-.. .......+...+|++. .+... . +..++||+..+..+...++
T Consensus 31 ~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~------V-~~~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 31 AAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMT------L-NKVCGSGLKALHLAAQAIR 103 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEE------e-cccchhHHHHHHHHHHHHH
Confidence 68999999999999999999876322 1122334567889764 22211 1 3456888888999999998
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..|+
T Consensus 104 sG~~d~vLv 112 (393)
T PRK05656 104 CGDAEVIIA 112 (393)
T ss_pred cCCCCEEEE
Confidence 776666655
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=84.78 E-value=7.6 Score=38.51 Aligned_cols=105 Identities=12% Similarity=0.050 Sum_probs=56.9
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
++|+|.|++... ........+.... .++++++++ ||++|+|||.+-+=-++. .........||+....|
T Consensus 225 ~pv~I~g~~~~~-~~~~~~~~d~~~~----~~~~~a~~~aAgi~~~diD~~Ei~D~F~-----~~~l~~~e~lGl~g~~p 294 (352)
T PRK07937 225 RPAWITGIEHRI-ESPSLGARDLTRS----PSTALAAEAATGGDAGGVDVAELHAPFT-----HQELILREALGLGDKTK 294 (352)
T ss_pred CcEEEEEEEEee-CCccccccccccH----HHHHHHHHHhcCCCHHHCCEEEEeCCCh-----HHHHHHHHHcCCCCCCC
Confidence 468999987531 1111111123332 333445555 699999999885422221 11122334577632112
Q ss_pred eee------EccCCchHHHHHHHHHHHHHcCCCCeEEEEecc
Q 015003 92 CTT------INKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127 (414)
Q Consensus 92 ~~~------v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e 127 (414)
.-+ -.-..++++.-+..+...++.+.++++|+.+.-
T Consensus 295 vN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~G 336 (352)
T PRK07937 295 VNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHATS 336 (352)
T ss_pred cCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEeccc
Confidence 111 111133678888888889988889999987543
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.72 E-value=2.9 Score=42.61 Aligned_cols=75 Identities=12% Similarity=0.038 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCC-CC-cCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDP-EQ-VNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~-~~-vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|+++|++++|||.+.+.... ......+.+.+|++. .+ ++++ ..++||+..+..+...+
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~--------~~CaSg~~al~~A~~~I 103 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ--------RNCASGMQALDSAAANI 103 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc--------chhhHHHHHHHHHHHHH
Confidence 689999999999999999988764332 122234568889854 22 2222 23788888899999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 104 ~sG~~d~vLv 113 (426)
T PRK08170 104 ALGRADLVLA 113 (426)
T ss_pred HCCCCCEEEE
Confidence 8776666554
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.39 E-value=3.4 Score=41.85 Aligned_cols=76 Identities=14% Similarity=0.099 Sum_probs=53.3
Q ss_pred HHHHHHHHHHc-CCCCCCCceeecccc----c--hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANA-GLEASQIDYYEINEA----F--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~a-Gl~~~DId~~~~hd~----~--~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|+++ |++++|||.+.+-.. + ......+.+.+|+...+... -+..++||...+..+...+
T Consensus 32 ~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p~~~-------v~~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 32 AQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLPGTT-------VNRYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCCeee-------eeccchhHHHHHHHHHHHH
Confidence 68999999997 999999998864321 1 11223467889985422211 1345789999999999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 105 ~sG~~d~vLv 114 (406)
T PRK07851 105 KAGEGDVFIS 114 (406)
T ss_pred HCCCCCEEEE
Confidence 9877776654
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.78 E-value=3.5 Score=41.50 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc------hhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF------SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~------~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..+++++|+++|++++|||.+.+-... ..........+|++.+ |... . +..++||+..+..+...+
T Consensus 32 ~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~------V-~~aCaSg~~Al~~A~~~I 104 (392)
T PRK07108 32 GHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMT------V-NRFCSSGLQTIALAAQRV 104 (392)
T ss_pred HHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceee------e-cchhhHHHHHHHHHHHHH
Confidence 689999999999999999988753221 1234445566787642 2211 1 455689999999999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..++
T Consensus 105 ~sG~~d~vla 114 (392)
T PRK07108 105 IAGEGDVFVA 114 (392)
T ss_pred HCCCCCEEEE
Confidence 9776665554
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=83.77 E-value=7.1 Score=39.26 Aligned_cols=101 Identities=17% Similarity=0.132 Sum_probs=56.2
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEE-EEeecCCCCCCcHHHHHHHHCCCCC---C
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF-FGNVLSANLGQAPARQAALGAGIPN---S 89 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi-~g~~~~~~~~~~~a~~va~~lgl~~---~ 89 (414)
.++|.|++.+-=... ...++.... -..+++++||+++|++++|||.+. .|+.++. ....-..-+...+|-.. .
T Consensus 237 ~~~I~g~g~~~d~~~-~~~~~~~~~-~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~-~D~~E~~al~~~f~~~~pv~s 313 (392)
T PRK09185 237 AVALLGVGESSDAHH-MSAPHPEGL-GAILAMQQALADAGLAPADIGYINLHGTATPL-NDAMESRAVAAVFGDGVPCSS 313 (392)
T ss_pred cEEEEEEEEeCCCCC-CCCCCCCHH-HHHHHHHHHHHHcCCCHHHccEEEeCCCCCcC-CCHHHHHHHHHHhCCCCceeC
Confidence 577888775322111 111222322 335899999999999999999975 3333221 12222223444444210 1
Q ss_pred cceeeEccCCchHHHHHHHHHHHHHcCC
Q 015003 90 VVCTTINKVCSSGMKAVMLAAQSIQLGI 117 (414)
Q Consensus 90 ~~~~~v~~aC~s~~~al~~A~~~I~sG~ 117 (414)
.....=...+++++..+..+...++.|.
T Consensus 314 ~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ 341 (392)
T PRK09185 314 TKGLTGHTLGAAGAVEAAICWLALRHGL 341 (392)
T ss_pred CCcccccChhhcchHHHHHHHHHHhcCC
Confidence 1122223557778888888888888874
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.65 E-value=3.4 Score=41.47 Aligned_cols=77 Identities=17% Similarity=0.152 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc-------hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF-------SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~-------~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q 376 (414)
..++++++|+++|++++|||.+.+...+ ......+.+.+|+...+.... +..++||...+..+...
T Consensus 26 a~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~~~~v-------~~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 26 AVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIPATRV-------EAACASGGAALRQAYLA 98 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCCeeEE-------eCCcHHHHHHHHHHHHH
Confidence 4688999999999999999988753321 222334567788863232111 23467888888899998
Q ss_pred HHhcCCCeeEE
Q 015003 377 LRHKKGKYGVG 387 (414)
Q Consensus 377 l~~~~~~~~l~ 387 (414)
++.+..+..|+
T Consensus 99 I~sG~~~~vLv 109 (389)
T PRK06064 99 VASGEADVVLA 109 (389)
T ss_pred HHCCCCCEEEE
Confidence 98766666554
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=83.63 E-value=3.5 Score=39.59 Aligned_cols=67 Identities=22% Similarity=0.260 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch----hHHHHHHHHcCCCCC--CcCCCCCccccCCCccchHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS----VVAIANQKLLGLDPE--QVNAHGGAVSLGHPLGCSGARILVTLLG 375 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~----~~~~~~~e~lGl~~~--~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (414)
.++.++||+.+++.++|||.+.+-.+.- .....+...||+.+. ++.+.| +|=..|++|+....+-++
T Consensus 81 v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~g----lGCaaga~glara~~y~r 153 (356)
T COG3424 81 VDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWG----LGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeec----chhhhhhhHHHHHHHHHh
Confidence 6899999999999999999998644322 345667899999985 455543 455556666555544443
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=83.51 E-value=3.3 Score=41.74 Aligned_cols=77 Identities=18% Similarity=0.192 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccch------hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAFS------VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~~------~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
...+++++|+++|++++|||.+.+-..+. .......+.+|+...+.... +..++||+..+..+...+
T Consensus 27 ~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V-------~~~Casg~~al~~A~~~I 99 (393)
T cd00826 27 GAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGM-------NNLCGSGLRALALAMQLI 99 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCcEEEe-------cchhHHHHHHHHHHHHHH
Confidence 36788999999999999999887543321 11112456677654332221 345688888899999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 100 ~sG~~~~vlv 109 (393)
T cd00826 100 AGGDANCILA 109 (393)
T ss_pred HCCCCCEEEE
Confidence 8766665554
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.04 E-value=3.7 Score=41.34 Aligned_cols=76 Identities=8% Similarity=0.065 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch-----hHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~-----~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..+++++|+++|++++|||.+.+-+.+. .........+|++. .|.... +..++||+..+..+...++
T Consensus 32 ~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V-------~~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 32 AHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTI-------NKVCGSGLKSVALAANSIM 104 (392)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhh-------cchhHHHHHHHHHHHHHHH
Confidence 6899999999999999999988644321 12233457788874 333221 3457899999999999999
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..+..++
T Consensus 105 sG~~dvvla 113 (392)
T PRK06633 105 TGDNEIVIA 113 (392)
T ss_pred cCCCCEEEE
Confidence 776665443
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.91 E-value=8.3 Score=38.77 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=59.7
Q ss_pred EEEEEEEEeecCC---C-ccccchHHHHHHHHHHcC-CCC-CCCceeecc--ccch---hHHHHHHHHcCCCCCCcCCCC
Q 015003 285 AKIRGFADAAQAP---E-WFTTAPSLAIPKAIANAG-LEA-SQIDYYEIN--EAFS---VVAIANQKLLGLDPEQVNAHG 353 (414)
Q Consensus 285 ~~i~g~~~~~~~~---~-~~~~~~~~a~~~al~~aG-l~~-~DId~~~~h--d~~~---~~~~~~~e~lGl~~~~vn~~G 353 (414)
+.|.|.+.+.-.. . ....-..+++++||+.|| +++ +|||.+.+. +.+. .......+.+|+...+...
T Consensus 6 vaIvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~-- 83 (385)
T PRK06066 6 VAIVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRPTMT-- 83 (385)
T ss_pred EEEEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCCeEE--
Confidence 6788888654321 1 112234689999999999 997 799987653 2221 1222345778875433211
Q ss_pred CccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 354 GAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 354 g~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
. +++|...+..+...++.+..+..|+
T Consensus 84 ----v----~~sg~~a~~~A~~aV~sG~~d~vLv 109 (385)
T PRK06066 84 ----V----AGDGLQGLAHAVMHINSGLANVVVV 109 (385)
T ss_pred ----E----eCcHHHHHHHHHHHHHcCCCCEEEE
Confidence 1 5678888889999999877776654
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=82.64 E-value=5 Score=40.33 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc--hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~--~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~ 381 (414)
...+++++|+++|++++|||.+.+.... ..........+|+...+... =+..++||...+..+...++.+.
T Consensus 26 a~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~~~~~~~lGl~~~~~~~-------v~~~caSg~~ai~~A~~~I~sG~ 98 (391)
T PRK08256 26 AAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSGQRALYEVGMTGIPIVN-------VNNNCSTGSTALFLARQAVRSGA 98 (391)
T ss_pred HHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchhHHHHHHcCCCCCCCcc-------cccccHHHHHHHHHHHHHHHCCC
Confidence 3688999999999999999977542211 11112345678875422211 13457888889999999999877
Q ss_pred CCeeEE
Q 015003 382 GKYGVG 387 (414)
Q Consensus 382 ~~~~l~ 387 (414)
.++.|+
T Consensus 99 ~d~vLv 104 (391)
T PRK08256 99 ADCALA 104 (391)
T ss_pred CCEEEE
Confidence 776664
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.34 E-value=4.1 Score=40.95 Aligned_cols=77 Identities=13% Similarity=0.001 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc---ch--hHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA---FS--VVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~---~~--~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||.+.+.+. +. .........+|++. .|..+. +..++||+..+..+...+
T Consensus 30 ~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v-------~~~caSg~~av~~Aa~~I 102 (388)
T PRK06366 30 GGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTV-------NVVCASGMLAVESAAREI 102 (388)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceee-------echhhHHHHHHHHHHHHH
Confidence 368999999999999999999876422 11 11233567889864 232221 245789999999999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 103 ~sG~~d~vla 112 (388)
T PRK06366 103 MLGERDLVIA 112 (388)
T ss_pred hcCCCCEEEE
Confidence 8776665553
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.70 E-value=4.7 Score=40.66 Aligned_cols=77 Identities=22% Similarity=0.138 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc---hhH--HHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF---SVV--AIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~---~~~--~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||.+.+-..+ ... .......+|++. .|... . +..++||+..+..+..++
T Consensus 35 ~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~------V-~~aCaSG~~Av~~A~~~I 107 (397)
T PRK06954 35 GAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTT------V-NKMCGSGMRAAMFAHDML 107 (397)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEee------c-cccchHHHHHHHHHHHHH
Confidence 3689999999999999999998753221 111 111222334443 12111 1 345789999999999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 108 ~sG~~d~vLv 117 (397)
T PRK06954 108 VAGSVDVIVA 117 (397)
T ss_pred HCCCCCEEEE
Confidence 9776665554
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=81.18 E-value=5 Score=40.43 Aligned_cols=77 Identities=17% Similarity=0.178 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc---c--hhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA---F--SVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~---~--~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||.+.+... + ........+.+|++.. |... . +..++||+..+..+...+
T Consensus 29 ~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~------v-~~~caSg~~av~~Aa~~I 101 (394)
T PLN02644 29 GSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTT------V-NKVCASGMKAVMLAAQSI 101 (394)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEE------E-eccchHHHHHHHHHHHHH
Confidence 368999999999999999999976331 1 1122236677898542 2111 1 345789999999999999
Q ss_pred HhcCCCeeEE
Q 015003 378 RHKKGKYGVG 387 (414)
Q Consensus 378 ~~~~~~~~l~ 387 (414)
+.+..+..|+
T Consensus 102 ~sG~~d~vlv 111 (394)
T PLN02644 102 QLGINDVVVA 111 (394)
T ss_pred HcCCCCEEEE
Confidence 9877776554
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=81.06 E-value=3.5 Score=40.81 Aligned_cols=89 Identities=12% Similarity=-0.096 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCC-CCcceee----E-ccCCchHHHHHHHHHH
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP-NSVVCTT----I-NKVCSSGMKAVMLAAQ 111 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~-~~~~~~~----v-~~aC~s~~~al~~A~~ 111 (414)
+=..+++++||+++|+++++||.|+.-. +++.. ...-+.-+...++-. +..+... + +.+.+++...+..+..
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~-~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADL-NGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCC-CCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 4456889999999999999999987422 22211 111111222223311 0122221 1 3445666667777778
Q ss_pred HHHcCC--CCeEEEEeccc
Q 015003 112 SIQLGI--NDIVVAGGMES 128 (414)
Q Consensus 112 ~I~sG~--~~~vLv~g~e~ 128 (414)
+++.|. -+.+||...+-
T Consensus 313 ~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHHcCcCCCCcEEEEecCC
Confidence 888884 57788876654
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=80.44 E-value=12 Score=36.99 Aligned_cols=99 Identities=16% Similarity=0.127 Sum_probs=52.1
Q ss_pred EEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEE-EEeecCCCCCCcHHHHHHHHCCCCCCcceee
Q 015003 16 CIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVF-FGNVLSANLGQAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 16 ~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi-~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~ 94 (414)
.|+|++.+--...... + ....+-..+++++||+++|++|+|||.+- .|+.++. ....-..-+...+|-.+..|...
T Consensus 185 ~I~g~~~~~d~~~~~~-p-~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~-~D~~E~~Ai~~~fg~~~~~~v~s 261 (342)
T PRK14691 185 EIVGYGTSADAYHMTS-G-AEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV-GDLGEINAIKHLFGESNALAITS 261 (342)
T ss_pred EEEEEEEEcCCCCCCC-C-CCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcC-CCHHHHHHHHHHhCCCCCceEEC
Confidence 4667665433322111 1 22345567899999999999999999875 3433331 22222334555555311223222
Q ss_pred E-----ccCCchHHHHHHHHHHHHHcCC
Q 015003 95 I-----NKVCSSGMKAVMLAAQSIQLGI 117 (414)
Q Consensus 95 v-----~~aC~s~~~al~~A~~~I~sG~ 117 (414)
+ ..-++++...+..+..+++.|.
T Consensus 262 ~K~~~GH~~~AaG~~~~~~~~l~l~~~~ 289 (342)
T PRK14691 262 TKSATGHLLGAAGGLETIFTVLALRDQI 289 (342)
T ss_pred CcccccCCcchhhHHHHHHHHHHHhCCc
Confidence 1 2223444444555555677774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 414 | ||||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 8e-94 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-92 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 4e-92 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 4e-87 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 1e-81 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 2e-73 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 4e-71 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 4e-71 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-70 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 2e-70 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 3e-70 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-70 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 5e-70 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 6e-70 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 7e-70 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 7e-70 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-70 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 8e-70 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 1e-69 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-69 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-68 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-68 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 4e-67 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-66 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 1e-56 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 2e-55 | ||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 1e-52 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 1e-52 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 1e-52 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 3e-50 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 8e-50 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 9e-50 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 7e-40 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 4e-38 |
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 643 bits (1661), Expect = 0.0
Identities = 198/399 (49%), Positives = 270/399 (67%), Gaps = 6/399 (1%)
Query: 7 SESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
+ ++V IV RTP+G FLGSLS + ATKLGSIAI+ A+++A + V+E + GN
Sbjct: 2 ASKPTLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGN 61
Query: 67 VLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGM 126
VL GQAP RQA LGAG+P S CTTINKVC+SGMKA+M+A+QS+ G D++VAGGM
Sbjct: 62 VLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGM 121
Query: 127 ESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
ESMSN P + R + G + D ++KDGL DVYN MG CAE A K I R+EQ
Sbjct: 122 ESMSNVPYVM--NRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQ 179
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246
D+YAI S+ R AA +G F E+ PV + + +G+P ++V +DE ++ D +K+ KL+
Sbjct: 180 DAYAINSYTRSKAAWEAGKFGNEVIPVTV-TVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238
Query: 247 F-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
F KE G+VTA NAS ++DGAAALVL++ A L + +A+I FADAA P F AP
Sbjct: 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPV 298
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
A + + GL+ I +E+NEAFS+V +AN K+L +DP++VN +GGAVSLGHP+G S
Sbjct: 299 YAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMS 358
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
GARI+ L L K+G+YG+ ICNGGGGASA++++ +
Sbjct: 359 GARIVGHLTHAL--KQGEYGLASICNGGGGASAMLIQKL 395
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 565 bits (1458), Expect = 0.0
Identities = 176/397 (44%), Positives = 238/397 (59%), Gaps = 6/397 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
+ + V IV ART +G F G+L++V LGS I+ LKRA V P V EV FG+VL
Sbjct: 2 NAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVL 61
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
+A GQ P RQA++GAGIP SV + +C SG+KAV LA QSI +G + IVVAGGME+
Sbjct: 62 AAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMEN 121
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS AP +LA R G ++G + D +L DGL D +++ MG+ AE A K ++R++QD
Sbjct: 122 MSKAP-HLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDK 180
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSF 247
A+ S R AQ +G F EI PV +S+ +G I V DE + + KL+P F
Sbjct: 181 VAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYF 238
Query: 248 KE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
G+VT NAS I+DGAAA+VL+ +A + GL +A+I ++ P P
Sbjct: 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPI 298
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
AI +A+ AG +D +EINEAF+ V+ A K LGL+PE+VN GGA++LGHPLG S
Sbjct: 299 PAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGAS 358
Query: 366 GARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
G RILVTLL L GV +C GGG A+ ++
Sbjct: 359 GCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQ 395
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 549 bits (1418), Expect = 0.0
Identities = 183/392 (46%), Positives = 250/392 (63%), Gaps = 4/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+DV IV RTP+G F G + SA +LG+IA++ A+ R + + EV GNVL L
Sbjct: 5 KDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL 64
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ ARQ A+ AGIPNSV T+NK+C SG+K+V LAAQSI G ND+V+AGG E+MS A
Sbjct: 65 GQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQA 124
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + AR GS++G+ T+VD ML DGL D +N + MG+ AE A K TR+ QD A+
Sbjct: 125 PYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALE 184
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDA--AKLMKLRPSFKEG 250
S + A + F EI PV++ RGK +DKDE K L KL+P+FK+
Sbjct: 185 SQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYP-KLGMTFEGLSKLKPAFKKD 242
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAA L+L+S KA ELG++ +AKI+ +A A PE T P A K
Sbjct: 243 GTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRK 302
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ AGL + ID E NEAF+ A+A + L +D ++N +GGA++LGHP+G SGARIL
Sbjct: 303 ALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARIL 362
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
VTL+ ++ +K + G+ +C GGG ++V+
Sbjct: 363 VTLIYEMQKRKVETGLATLCIGGGQGISMVVS 394
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 540 bits (1393), Expect = 0.0
Identities = 163/393 (41%), Positives = 229/393 (58%), Gaps = 4/393 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ I ART +G F G+ ++ A +LG+ I L+RA V V EV G VL A
Sbjct: 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P +N++C SG++AV L Q I G I+VAGGMESMS A
Sbjct: 63 GQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + A R G ++G ++D M+KDGL D + + MG AE A + ++RDEQD++A+
Sbjct: 123 P-HCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGG 251
S + AAQ G F EI P + +G I VD DE + + KLRP+F + G
Sbjct: 182 SQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDKEG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKA 311
+VTAGNAS ++DGAAA +L+S +A G+Q + +I +A P+ T P A KA
Sbjct: 240 TVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKA 299
Query: 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILV 371
+ AG + +D E NEAF+ A A K LG DP VN +GGA+++GHP+G SGARIL
Sbjct: 300 LERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILN 359
Query: 372 TLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
TLL ++ + + G+ +C GGG A+ +E +
Sbjct: 360 TLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 392
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 526 bits (1358), Expect = 0.0
Identities = 176/392 (44%), Positives = 246/392 (62%), Gaps = 5/392 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
R+V I ART +G F G+ SVSA +LG A + A+KRAN+ P ++ E G VL+A L
Sbjct: 7 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ ARQ ALGAGIP TIN VC SG+++V +A+Q I LG DI++ GG E+MS +
Sbjct: 67 GQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMS 126
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + AR G+R+G VD M+KDGL D++N++ MG+ AE A + ITR+EQD A+
Sbjct: 127 PYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALA 186
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDA--AKLMKLRPSFKEG 250
S + AQ G F EI PV + +G +VDKDE + K KL KLRP+FK+
Sbjct: 187 SQNKAEKAQAEGKFDEEIVPVVIKGRKGDT--VVDKDEYI-KPGTTMEKLAKLRPAFKKD 243
Query: 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPK 310
G+VTAGNAS I+DGAA LV+++ KA ELG++ +A I + A P+ P A K
Sbjct: 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKK 303
Query: 311 AIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARIL 370
A+ A + ID E NEAF+ ++A + L +D +VN +GGA+++GHP+GCSGARIL
Sbjct: 304 ALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARIL 363
Query: 371 VTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
TLL ++ + K G+ +C GGG + L+++
Sbjct: 364 TTLLYEMKRRDAKTGLATLCIGGGMGTTLIVK 395
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 486 bits (1255), Expect = e-172
Identities = 162/396 (40%), Positives = 234/396 (59%), Gaps = 6/396 (1%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVL 68
S +V I R+P+G F G+L +V+ +L ++ A+KR V+P V EV G+ +
Sbjct: 1 SNAMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCI 60
Query: 69 SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMES 128
AR AAL AG P++V TI + CSSGM+A+M AA IQLG++++VVAGG+E+
Sbjct: 61 QRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEA 120
Query: 129 MSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188
MS++P L + R G RL H I D + + L D + MG AE ++ ITR+EQD
Sbjct: 121 MSSSPYALKQHRWGQRLQHGEIRD-TVWEVLEDPIHHIMMGETAENLVEQYEITREEQDE 179
Query: 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPS 246
A+RS + A SG F +I P+ + R + ++ KDE + D A KL L+P+
Sbjct: 180 VALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHP-RADITAEKLAGLKPA 236
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
F++ GSVTAGNAS ++DG+A LVL+S KA E GLQ +A+I G++ A P+ P+
Sbjct: 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAP 296
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSG 366
AI K + D EINEAF+ +A +K L LD E+VN +G V LGHP+GC+G
Sbjct: 297 AIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTG 356
Query: 367 ARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402
ARI V+L+ L+ + + G+ +C GGG AL +E
Sbjct: 357 ARITVSLIHELKRRGLEKGIASLCVGGGIGVALFIE 392
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 441 bits (1136), Expect = e-154
Identities = 148/408 (36%), Positives = 227/408 (55%), Gaps = 18/408 (4%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ IV RTP+G G+L+SV L + A+ + R+ V V++V+ G A
Sbjct: 2 PEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 73 -GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
+ AR A L AG P V T+N++C SG++AV AA++I G + + G+ESMS
Sbjct: 62 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 132 APKYLAEARKGSRLGHDTIVD-----GMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQ 186
AP + + +G G+ + D + + +Y MG AE A + I R+EQ
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQ 181
Query: 187 DSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLR 244
D +A+ S ++ + A G F E+ PV + G+ + I+V++DEG + D KL LR
Sbjct: 182 DRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGP-RRDTSLEKLAALR 238
Query: 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
P F+EGG+VTAGN+S ++DGAAA++LVS A GL+ +A++R A A P P
Sbjct: 239 PVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGP 298
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGHPL 362
A KA+ AGL S + E+NEAF+ A+A + L + +++N +GGA++LGHPL
Sbjct: 299 VPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPL 358
Query: 363 GCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQAVRVG 410
G SGARIL TL+ +R +K ++G+ +C G G A+V+E +G
Sbjct: 359 GASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVE-----GMG 401
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 418 bits (1076), Expect = e-145
Identities = 144/397 (36%), Positives = 205/397 (51%), Gaps = 25/397 (6%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR----ANVKPLLVQEVFFGNV 67
DV IV R+ +G GF G+ V+ L + + R L++EV GNV
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 68 LSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGME 127
L+ G R A L +GIP S +N+ CSSG+ AV A I++G DI +A G+E
Sbjct: 70 LNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVE 129
Query: 128 SMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
SM+N + + LG I L+ MG+ E A I+R +QD
Sbjct: 130 SMTNNY------KNVNPLGM--ISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQD 181
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRP 245
+A S+++ A+N GLF EI P+++ G I DEG + + A L +RP
Sbjct: 182 EFAANSYQKAYKAKNEGLFEDEILPIKLPDG-----SICQSDEGP-RPNVTAESLSSIRP 235
Query: 246 SF-KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAP 304
+F K+ G+ TAGNAS +SDG A ++L A +L L V+ + F PE P
Sbjct: 236 AFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGP 295
Query: 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC 364
+ AIPK + GL+ ID +EINEAF+ A+ LG+D +VN GGA++LGHPLGC
Sbjct: 296 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGC 355
Query: 365 SGARILVTLLGVLRHKKGKYGVGGICNGGG-GASALV 400
+GAR + T+L L KK + GV +C G G GA+A+
Sbjct: 356 TGARQVATILREL--KKDQIGVVSMCIGTGMGAAAIF 390
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 412 bits (1062), Expect = e-143
Identities = 149/397 (37%), Positives = 217/397 (54%), Gaps = 22/397 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN 71
DV +V RT + G + +L S + LK N++P + ++ GNVL
Sbjct: 30 ADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG 89
Query: 72 LGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131
G AR A + IP +V +T+N+ CSSG++AV A I+ G DI +A G+ESMS
Sbjct: 90 AGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 149
Query: 132 APKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191
A + + + D ++ MG+ +E A + I+R++QD++A+
Sbjct: 150 ADRGNPGNITSRLMEKEKARDCLI-----------PMGITSENVAERFGISREKQDTFAL 198
Query: 192 RSFKRGIAAQNSGLFAWEIAPVEMSS----GRGKPFIIVDKDEGLEKFD--AAKLMKLRP 245
S ++ AQ+ G F EI PV + G + I V +DEG+ + L KL+P
Sbjct: 199 ASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRS-ITVTQDEGI-RPSTTMEGLAKLKP 256
Query: 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305
+FK+ GS TAGN+S +SDGAAA++L KA ELGL ++ +R +A P+ P+
Sbjct: 257 AFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPA 316
Query: 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365
AIP A+ AGL S +D +EINEAF+ A + L L PE+VN GGAV+LGHPLGC+
Sbjct: 317 YAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCT 376
Query: 366 GARILVTLLGVL-RHKKGKYGVGGICNGGG-GASALV 400
GAR ++TLL L R K YGV +C G G GA+A+
Sbjct: 377 GARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVF 413
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 409 bits (1054), Expect = e-142
Identities = 146/405 (36%), Positives = 213/405 (52%), Gaps = 24/405 (5%)
Query: 9 SIKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGN 66
S+ RDV IV RTPMG G + A + + I L+R + V P V++V +G
Sbjct: 1 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGC 60
Query: 67 VLSA-NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
V G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG
Sbjct: 61 VNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGG 120
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+E M + + H VD L+ MG+ AE+ H I+R++
Sbjct: 121 VEHMGHVS-----------MMHG--VDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKL 243
QD++A+RS + A G F EI P++ G I D DE + + D L L
Sbjct: 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETI-RPDTTLESLAAL 225
Query: 244 RPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTT 302
+P+F +GG+VTAG +S I+DGA+ ++++S +A +LGL+ +A IR A A P
Sbjct: 226 KPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGY 285
Query: 303 APSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAVSLG 359
P A KA+ AGL + ID+ E+NEAF+ A+ K L + E+VN HGGA++LG
Sbjct: 286 GPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALG 345
Query: 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
HP GCSGARI TLL V++ G +G+ +C G G A V E +
Sbjct: 346 HPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 390
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 402 bits (1036), Expect = e-138
Identities = 145/411 (35%), Positives = 215/411 (52%), Gaps = 24/411 (5%)
Query: 8 ESIKARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGN 66
S+ DV IV RTP+ G+ L + + +++ N+ P V ++ G
Sbjct: 25 TSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGT 84
Query: 67 VLSANLGQA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
VL+ +A R AA AG P +V T+N+ CSSG++AV A +I+ G DI + G
Sbjct: 85 VLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 144
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+ P + + + +L MGV +E A + ++R E
Sbjct: 145 LESMTTNPMAWEGSVNPAVKKFAQAQNCLL-----------PMGVTSENVAQRFGVSRQE 193
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS-----SGRGKPFIIVDKDEGLEKFD--AA 238
QD A+ S ++ AA +G F EI PV+ +G KP I V D+G+ + A
Sbjct: 194 QDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKP-ITVSVDDGI-RPTTTLA 251
Query: 239 KLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE 298
L KL+P FK+ G+ TAGN+S +SDGA A++L+ A++ GL V+ R FA P
Sbjct: 252 SLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPA 311
Query: 299 WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358
P++AIP A+ AGLE ID +EINEAF+ + + LGLDPE++N +GGA+++
Sbjct: 312 IMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAI 371
Query: 359 GHPLGCSGARILVTLL--GVLRHKKGKYGVGGICNGGGGASALVLELMQAV 407
GHPLG +GAR + TLL R K ++GV +C G G +A V E V
Sbjct: 372 GHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGV 422
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 397 bits (1023), Expect = e-137
Identities = 142/401 (35%), Positives = 205/401 (51%), Gaps = 24/401 (5%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSA 70
V IV RTPMG G+ +V A L + + L R ++ + ++++G V
Sbjct: 2 EQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQT 61
Query: 71 -NLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESM 129
G AR AAL A IP+SV T+N++C S M+A+ AA+ I G + + GG+E M
Sbjct: 62 LEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHM 121
Query: 130 SNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSY 189
+ P + H L + MG+ AE+ + H I+R+ QD +
Sbjct: 122 GHVP-----------MSHGVDFHPGLSRNVAKAA--GMMGLTAEMLSRLHGISREMQDQF 168
Query: 190 AIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFD--AAKLMKLRPSF 247
A RS R AA SG F EI P G + DE + + + L LRP+F
Sbjct: 169 AARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVI-RPETTVEALSTLRPAF 226
Query: 248 KE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSL 306
G+VTAG +S +SDGAAA++++S +A ELGL+ A+IR A P P
Sbjct: 227 DPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVP 286
Query: 307 AIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLG 363
A A+ AGL AS ID +E+NEAF+ + K LGL E++N +GGA++LGHPLG
Sbjct: 287 ASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLG 346
Query: 364 CSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
CSGARI TL+ ++ K ++G+ +C G G A V E +
Sbjct: 347 CSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFERV 387
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 331 bits (851), Expect = e-111
Identities = 125/429 (29%), Positives = 196/429 (45%), Gaps = 65/429 (15%)
Query: 13 RDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRAN-VKPLLVQEVFFGNVL-- 68
+ I RTP G GSL+ V L ++ +R + L+ ++ G V
Sbjct: 7 EEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPV 66
Query: 69 ---SANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
++ AR A L AG+P + +N+ C+SG++AV AAQ ++ G +D+V+AGG
Sbjct: 67 GDQGGDI----ARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGG 122
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW--------DVYNDFGMGVCAEICAN 177
+ESMS P M DG G+ A++ A
Sbjct: 123 VESMSRVP--------------------MGSDGGAWATDPETNYRIGFVPQGIGADLIAT 162
Query: 178 KHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFD 236
+R++ D+YA+RS ++ AA + G FA + PV +G +I+D DE +
Sbjct: 163 LEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGL----VILDHDEHMRPDTT 218
Query: 237 AAKLMKLRPSFKEGGS---------------------VTAGNASIISDGAAALVLVSGVK 275
L KL+ +F G T GN+S I DGAA +++ S
Sbjct: 219 MEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKA 278
Query: 276 ALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVA 335
GL A+I A + P T P+ A K + AGL ID +E+NEAF+ V
Sbjct: 279 GKSQGLTPRARIVATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVV 338
Query: 336 IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGG 395
+ QK L + E++N +GGA+++GHPLG +GA I T++ L + + + +C GGG
Sbjct: 339 LKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNARRALITLCIGGGM 398
Query: 396 ASALVLELM 404
A ++E +
Sbjct: 399 GVATIIERV 407
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 52/410 (12%), Positives = 96/410 (23%), Gaps = 124/410 (30%)
Query: 5 EPSESIKARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFF 64
+P E K V VG G +G +S+ L + + +L QE F
Sbjct: 1031 DPYEMYKYVHVSEVGNC---SGSGMGGVSA-----LRGMFKDRFKDEPVQNDIL-QESFI 1081
Query: 65 GNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAG 124
+ + + + P C++ +++V + ++I G I + G
Sbjct: 1082 NTMSAWVN------MLLISSSGPIKTPVGA----CATSVESVDIGVETILSGKARICIVG 1131
Query: 125 GMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRD 184
G + D +G E K T
Sbjct: 1132 GYD--------------------DFQEEGS-----------------FEFGNMKATSNTL 1154
Query: 185 EQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244
E+ F P EMS R P R
Sbjct: 1155 EE-------------------FEHGRTPAEMS--R--PA---TTT--------------R 1174
Query: 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRG---FADAAQ--APEW 299
F + + GA +++ AL++G+ + + D P
Sbjct: 1175 NGF------------MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVP-- 1220
Query: 300 FTTAPSLAIPKAIANAGLEASQIDYYEINEAF--SVVAIANQKLLGLDPEQV---NAHGG 354
AP I A + + +N + + ++ ++
Sbjct: 1221 ---APGKGILTT-AREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAE 1276
Query: 355 AVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404
+ R + G L
Sbjct: 1277 EIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGA 1326
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 1e-07
Identities = 58/396 (14%), Positives = 116/396 (29%), Gaps = 133/396 (33%)
Query: 2 VP-LEPSESIK--------ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRA 52
V L+P ++ A++V I G + G G + V+ S ++C
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDG-----VLGS-GK-TWVALDVCLSYKVQCK---- 179
Query: 53 NVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV------CTTINKVCSSGMKAV 106
+ NL P +V+ I+ +S
Sbjct: 180 ----------MDFKIFWLNLKNC---------NSPETVLEMLQKLLYQIDPNWTSRSDH- 219
Query: 107 MLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSR-LGHDTIVDGMLKDGLWD--VY 163
+ +I+L I+ I + L +++ L +V L + + +
Sbjct: 220 ---SSNIKLRIHSI---------QAELRRLLKSKPYENCL----LV---L-LNVQNAKAW 259
Query: 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGI-----------AAQNSGLFA-W-EI 210
N F + C + TR +Q + + + + L + +
Sbjct: 260 NAFNLS-CKIL-----LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 211 A----PVEMSSGRGKPFII-----VDKD-----EGLEKFDAAKLMK-------------L 243
P E+ + P + +D + + + KL
Sbjct: 314 RPQDLPREVLTT--NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY 371
Query: 244 RPSFKEGGSVTAGNASIISDGA----AALVLVSGVKALELGLQVIAKIRGFADAAQAPEW 299
R F S+ A L L+ + V+ K+ ++ + P+
Sbjct: 372 RKMFDR--------LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 300 FT-TAPSLAI---PKAIANAGLEASQIDYYEINEAF 331
T + PS+ + K L S +D+Y I + F
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 44.6 bits (104), Expect = 9e-06
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 19/45 (42%)
Query: 274 VKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE 318
+K L+ L++ A + +AP+LAI A +E
Sbjct: 22 LKKLQASLKLYA-----------DD---SAPALAI-----KATME 47
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.98 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.98 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.97 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.97 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.97 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.97 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.97 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.97 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.96 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.96 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.96 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.96 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.96 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.96 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.96 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.96 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.95 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.95 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.95 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.95 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.95 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.95 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.95 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.94 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.94 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.94 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.94 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.93 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.93 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.93 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.93 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.93 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.92 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.92 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.92 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.92 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.91 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.91 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.91 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.91 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.91 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.91 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.91 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.91 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.91 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.9 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.89 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.89 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.88 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.88 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.88 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.88 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.84 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.74 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 94.35 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 93.84 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 93.49 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 93.16 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 93.04 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 92.49 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 92.13 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 91.98 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 91.43 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 91.42 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 91.22 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 91.03 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 90.89 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 89.78 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 89.77 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 89.35 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 89.2 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 89.06 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 89.01 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 88.99 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 88.74 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 88.47 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 87.64 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 87.39 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 87.36 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 87.13 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 86.98 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 86.87 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 86.69 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 86.65 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 86.17 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 86.14 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 86.05 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 85.99 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 85.59 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 85.59 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 85.4 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 85.32 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 84.12 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 83.4 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 83.16 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 80.99 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 80.77 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 80.04 |
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-67 Score=523.83 Aligned_cols=390 Identities=45% Similarity=0.697 Sum_probs=360.5
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
|++|+|||+++|||+++++.+++.+..+|+.+|+++||+|+|+++++||.+++|+.++++..++.+.+++..+|+++.+|
T Consensus 6 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 85 (396)
T 4dd5_A 6 MREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP 85 (396)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce
Confidence 47999999999999999888889999999999999999999999999999999999988888999999999999986799
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|.++..|+.....+.+..++.....+++..+++++||.+..|++.
T Consensus 86 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (396)
T 4dd5_A 86 AMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGIT 165 (396)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHH
T ss_pred EEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999998876544444444554445555666788899888899999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG 250 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (414)
|++|+++||+|+|++++|++++|+++..|+.++.|.+||+|++++.+.+. ..+++|+.+|+ +|.|+++++||+|+++
T Consensus 166 a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~l~~~~~v~~p~ 243 (396)
T 4dd5_A 166 AENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGD--TVVDKDEYIKPGTTMEKLAKLRPAFKKD 243 (396)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----C--EEECSCSCCCTTCCHHHHHHCCBSSSTT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCc--eeecCcccccCCCCHHHHhhCCCccCCC
Confidence 99999999999999999999999999999999999999999998877653 35899999998 9999999999999989
Q ss_pred CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 251 GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 251 g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
|++|++|||+++|||+++||++.+.+++++.+++++|.|++...+.|..+..++..+++++|+++|++++|||++|+||+
T Consensus 244 g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 323 (396)
T 4dd5_A 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDLVEANEA 323 (396)
T ss_dssp CSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred CCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCEEEecCh
Confidence 99999999999999999999999999999999999999999988777777778899999999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 331 FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|+...+.+.+.||++++|+|++||++++|||.|++|+.+++++++||++++++++|+++|++||++.++|||+
T Consensus 324 f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 324 FAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp BHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCceeEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999984
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-66 Score=517.94 Aligned_cols=390 Identities=41% Similarity=0.623 Sum_probs=359.4
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
||++|+|||+++|||+++.+.+++.+..+|+.+|+++||+|+|+++++||.+++|+..++..+++++..++..+|+++++
T Consensus 3 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~ 82 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTV 82 (394)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTC
T ss_pred CCceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCc
Confidence 56899999999999999988888999999999999999999999999999999999988777888999999999997679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|.++..|+.....+.+..++.....+++. +++++||....|+.
T Consensus 83 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 161 (394)
T 3ss6_A 83 TGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW-EVLEDPIHHIMMGE 161 (394)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH-HHTBCTTTCCBHHH
T ss_pred eEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc-cccccccccchHHH
Confidence 99999999999999999999999999999999999999999776544333333334333334433 67788888899999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
.|++|+++||+|+|++++|++++|++|..|+.++.|++||+|++++.+.+. ..+++|+.+|+ +|.|++++++|+|++
T Consensus 162 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~--~~~~~d~~~R~~~t~e~~~~~~pvf~~ 239 (394)
T 3ss6_A 162 TAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKE--VVFSKDEHPRADITAEKLAGLKPAFRK 239 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCE--EEECSCCCCCTTCCHHHHHTCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCc--eeecccccccCCCCHHHHhhCCCccCC
Confidence 999999999999999999999999999999999999999999998877654 35899999998 999999999999998
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++||++++||++.+.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||++++||
T Consensus 240 ~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d 319 (394)
T 3ss6_A 240 DGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLEINE 319 (394)
T ss_dssp TCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEEeCC
Confidence 89999999999999999999999999999999999999999998777777777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+.+.|.||++++|+|++||++++|||.|++|+..++++++||++++++++|+++|+|||++.++|||+
T Consensus 320 ~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 320 AFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTTEEEEEEEEE
T ss_pred chHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccCcCceeEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-66 Score=517.60 Aligned_cols=392 Identities=46% Similarity=0.688 Sum_probs=359.0
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
+|++|+|||+++|||+++.+.+++.+..+|+.+|+++||+|+|+++++||.+++|+..++..+++++..++..+|+++++
T Consensus 3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~ 82 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV 82 (395)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence 36899999999999999988888999999999999999999999999999999999988777889999999999997679
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++++.+|+|++.+|..|+.+|++|.+|+|||+|+|+++..|+.....+.+..++.....+++..+++++|+....|+.
T Consensus 83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (395)
T 4e1l_A 83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGI 162 (395)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHH
T ss_pred eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHH
Confidence 99999999999999999999999999999999999999998776543333333344444455556678888888889999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
.|++|+++||+|+|+++++++++|+++..|++++.|++||+|++++.+.++| .++++|+.+|+ +|.|++++++|+|++
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~-~~~~~d~~~r~~~t~e~l~~~~~v~~~ 241 (395)
T 4e1l_A 163 TAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKI-ETIDKDEYPKLGMTFEGLSKLKPAFKK 241 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEE-EEECSCSCCCTTCCHHHHHHCCBSSST
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcc-eEECCccccCCCCCHHHHhhCCCccCC
Confidence 9999999999999999999999999999999999999999999987776665 45789999998 999999999999999
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++||++++||++.+.+++++.+++++|.|++...+.|..+..++..+++++|+++|++++|||++++||
T Consensus 242 ~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~~d 321 (395)
T 4e1l_A 242 DGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLIEANE 321 (395)
T ss_dssp TCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred CCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence 99999999999999999999999999999999999999999998877777777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+.+.+.||++++|+|++||+.++|||.|++|+..++++++||++++++++++++|+|||++.++|||+
T Consensus 322 ~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 322 AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCSEEEEEEESSTTEEEEEEEEC
T ss_pred hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999984
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-65 Score=511.10 Aligned_cols=390 Identities=38% Similarity=0.562 Sum_probs=342.6
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCCCcc
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~~~~ 91 (414)
++|+|||+++|||+++++.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+++. .++.+..++..+|+++++|
T Consensus 2 ~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p 81 (401)
T 1ulq_A 2 PEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA 81 (401)
T ss_dssp -CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE
T ss_pred CceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCcc
Confidence 689999999999999988888899999999999999999999999999999999887765 6889999999999975689
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccc----cccccc-ccccCC
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGM----LKDGLW-DVYNDF 166 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~ 166 (414)
+++++++|+|++.+|..|+++|++|++|+|||+|+|.++..|+.....+.+..++.....+.+ ...++. ++|...
T Consensus 82 ~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 161 (401)
T 1ulq_A 82 GCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE 161 (401)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCC
T ss_pred EeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccc
Confidence 999999999999999999999999999999999999998866533211111111110000110 112333 223345
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
.|+..|++|+++||+|+|+++++++++|+++..||.++.|+++|+|++++++.++ ..+++|+.+|+ +|.|+++++||
T Consensus 162 ~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rp 239 (401)
T 1ulq_A 162 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALRP 239 (401)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSCB
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCc--eeeccccccCCCCCHHHHhhCCC
Confidence 6899999999999999999999999999999999999999999999877655432 45889999998 99999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCcee
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|+++|++|++|||+++|||+++||++++++++++.+++++|.|++...+.+..+..++..+++++|+++|++++|||++
T Consensus 240 if~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~i 319 (401)
T 1ulq_A 240 VFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLI 319 (401)
T ss_dssp SSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEE
T ss_pred ccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99888999999999999999999999999999999999999999999988777777788999999999999999999999
Q ss_pred eccccchhHHHHHHHHcCC--CCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 326 EINEAFSVVAIANQKLLGL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl--~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
|+||+|+.+.+..+|.||+ +.+|+|++||++++|||.|++|+++++++++||++++.+++|.++|++||++.++|||+
T Consensus 320 e~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 320 ELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVEG 399 (401)
T ss_dssp EECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred EEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCCCEEEEEeecCCcccEEEEEEe
Confidence 9999999999999999999 45689999999999999999999999999999999999999999999999999999997
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 400 ~ 400 (401)
T 1ulq_A 400 M 400 (401)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-65 Score=509.88 Aligned_cols=388 Identities=41% Similarity=0.633 Sum_probs=348.2
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV 91 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~ 91 (414)
|++|+|||+++|||+++.+++.+.++.+|+.+|+++||+|+|+++++||.+++|+..++..+++.+.+++..+|+++.+|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 47899999999999999888888999999999999999999999999999999998887777889999999999975589
Q ss_pred eeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHH
Q 015003 92 CTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVC 171 (414)
Q Consensus 92 ~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (414)
+++++++|+|++.+|..|+++|++|++|+|||+|+|.++..|+. ...+.+..++.....+.+..+++++||....|+.+
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHC-AHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTT 160 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEE-ECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHH
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccc-cccccccccCcccccchhhhcccccccccchHHHH
Confidence 99999999999999999999999999999999999999876652 11011111111111222333456667666789999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCC-CCCCceeeecCCCccc-cCHHHHhcCCCCccC
Q 015003 172 AEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSG-RGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKE 249 (414)
Q Consensus 172 a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~-~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (414)
|++|+++||+|+|++++|++++|++|..|++++.|++||+|++.+.+ .++| |++|+.+|+ +|.|+++++||++++
T Consensus 161 a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~---f~~d~~~r~~~t~e~~~~~~~v~~~ 237 (392)
T 2vu1_A 161 AENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDIT---VDADEYIRHGATLDSMAKLRPAFDK 237 (392)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEE---ECSCSSCCTTCCHHHHHTCCCSSCT
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCcee---eccccccCCCCCHHHHhcCCCccCC
Confidence 99999999999999999999999999999999999999999987543 2456 999999999 999999999999988
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++|||+++||++.+.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||+||+||
T Consensus 238 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d 317 (392)
T 2vu1_A 238 EGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANE 317 (392)
T ss_dssp TCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred CCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEEecc
Confidence 89999999999999999999999999999999999999999998877766777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+.+.+.||++++|+|++||++++|||.|++|+++++++++||++++++++|++.|+|||++.++|||+
T Consensus 318 ~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 318 AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCCCEEEEEEecccchheEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-64 Score=503.37 Aligned_cols=388 Identities=45% Similarity=0.658 Sum_probs=347.0
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|+|||+++|||+|+.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+.+.++..+.+++..+|++..+|+
T Consensus 6 ~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~ 85 (397)
T 1wl4_A 6 DPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPA 85 (397)
T ss_dssp SCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCE
T ss_pred CcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccE
Confidence 57999999999999998888889999999999999999999999999999999988877678899999999999656999
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++++++|+|++.||..|+++|++|++|+|||+|+|.++..|+... .+.+..++....++.+...++++||....|+.++
T Consensus 86 ~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a 164 (397)
T 1wl4_A 86 WSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAY-LRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITA 164 (397)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECC-CSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHH
T ss_pred EEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccc-cccccccCcccccchhccccccCccccchHHHHH
Confidence 999999999999999999999999999999999999987665321 1111111111112223334666666667899999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCC-
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEG- 250 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~- 250 (414)
++|+++||+|+|++++|++++|++|..|+..+.|++||+|++++.+.++ ..+++|+.+++ +|.|+++++||+|+++
T Consensus 165 ~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~--~~~~~d~~~r~~~t~e~~~~~rpvfd~~~ 242 (397)
T 1wl4_A 165 ENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGL--IEVKTDEFPRHGSNIEAMSKLKPYFLTDG 242 (397)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHTSCCSSCCSS
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCc--eeeccccccCCCCCHHHHhcCCCccCCCC
Confidence 9999999999999999999999999999999999999999987665432 35778888887 9999999999999765
Q ss_pred -CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 251 -GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 251 -g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
|++|++|||+++|||+++||++++.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||+||+||
T Consensus 243 ~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~d 322 (397)
T 1wl4_A 243 TGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINE 322 (397)
T ss_dssp CCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECC
T ss_pred CCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 8999999999999999999999999999999999999999998877766777889999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+.+.+.+.+.||++++|+|++||++++|||.|++|+++++++++||++++++++|++.|+|||++.++|||+
T Consensus 323 ~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 323 AFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTTEEEEEEEEE
T ss_pred ccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCCCEEEEEEecccchheEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-64 Score=500.32 Aligned_cols=378 Identities=37% Similarity=0.528 Sum_probs=343.5
Q ss_pred CCceEEEeeecCccccCC-CCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCCC
Q 015003 12 ARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIPN 88 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~AL~dA-gi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~~ 88 (414)
|++|+|||+++|||+++. +++++.+..+|+.+|+++||+|+ |+++++||.+++|+..++.. +++.+.+++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 478999999999999997 88888999999999999999999 99999999999999988775 7889999999999976
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
.+|+++++++|+|++.+|.+|+++|++|++|++||+|+|+++..|+... ++ ..+ ..+.+++++ ...|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~-------~~----~~~-~~~~~~~~~-~~~~ 147 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHG-------VD----FHP-GLSRNVAKA-AGMM 147 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTT-------BC----CCT-TCC--------CCC
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccc-------cC----cCc-ccccccccc-cccH
Confidence 7999999999999999999999999999999999999999998765411 11 111 234455666 6789
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSF 247 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 247 (414)
++.|++|+++||+|+|++++|++++|+++..|++++.|+++|+|++++.+.+++ ..+++|+.+|+ +|.|+++++||+|
T Consensus 148 g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~-~~~~~d~~~r~~~t~e~l~~~~p~f 226 (387)
T 3goa_A 148 GLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVL-KQFNYDEVIRPETTVEALSTLRPAF 226 (387)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCE-EEECSCTTCCTTCCHHHHTTSCCSS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcc-cccccccccCCCCCHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999999999988776653 35899999998 9999999999999
Q ss_pred cC-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceee
Q 015003 248 KE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYE 326 (414)
Q Consensus 248 ~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~ 326 (414)
++ +|++|++|||+++||++++||++.+.+++++.+++++|.|++...+.+..+..++..+++++|+++|++++|||++|
T Consensus 227 ~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve 306 (387)
T 3goa_A 227 DPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFE 306 (387)
T ss_dssp CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred cCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 98 89999999999999999999999999999999999999999999988887778889999999999999999999999
Q ss_pred ccccchhHHHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 327 INEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 327 ~hd~~~~~~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+||+|+.+.+...+.||++ ..|+|++||++++|||.|++|+.+++++++||+.+++++++++.|+|||++.++|||+
T Consensus 307 ~h~~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 307 MNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp ECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEC
T ss_pred EeCcchHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCCCEEEEEeccCcCceEEEEEEe
Confidence 9999999999999999994 4589999999999999999999999999999999999999999999999999999986
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-64 Score=507.33 Aligned_cols=385 Identities=36% Similarity=0.571 Sum_probs=340.7
Q ss_pred CCCceEEEeeecCccccCC-CCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCC
Q 015003 11 KARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPN 88 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~ 88 (414)
+|++|+|||+++|||+++. +++++.++.+|+.+|+++||+|+|+++++||.+++|+..++. .+++++..++..+|++.
T Consensus 28 ~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 107 (442)
T 2wu9_A 28 YGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 107 (442)
T ss_dssp GGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCT
T ss_pred cCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCC
Confidence 3578999999999999986 788889999999999999999999999999999999887644 24567889999999965
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
.+|+++++++|+|++.+|..|+++|++|++|+|||+|+|.++..|+.... ...+++..+++ +|+....|
T Consensus 108 ~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~----------~~~~~~~~~~~-~~~~~~~m 176 (442)
T 2wu9_A 108 TVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEG----------SVNPAVKKFAQ-AQNCLLPM 176 (442)
T ss_dssp TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCS----------CCCGGGGGCHH-HHHTTSCH
T ss_pred CceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccc----------ccchhhhhccc-cccchhHH
Confidence 68999999999999999999999999999999999999999875542100 00011111232 44555689
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeec--CCC---CCCceeeecCCCccc-cCHHHHhc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMS--SGR---GKPFIIVDKDEGLEK-FDAAKLMK 242 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~--~~~---~~p~~~~~~~~~~~~-~~~~~~~~ 242 (414)
+..|++|+++||+|+|++++|++++|++|..||.++.|+++|+|++++ ++. +.. .++++||.+|+ +|.|+|++
T Consensus 177 g~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~-~~~~~De~~r~~~t~e~~~~ 255 (442)
T 2wu9_A 177 GVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKP-ITVSVDDGIRPTTTLASLGK 255 (442)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEE-EEECSCTTCCTTCCHHHHHT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCc-eeeecccCcCCCCCHHHHhc
Confidence 999999999999999999999999999999999999999999998764 110 011 35899999998 99999999
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCC
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
+||+|+++|++|++|||+++|||+++||++++.+++++.+|+++|.|++...+.|..+..++..+++++|+++|++++||
T Consensus 256 ~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DI 335 (442)
T 2wu9_A 256 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDI 335 (442)
T ss_dssp SCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHC
Confidence 99999889999999999999999999999999999999999999999999988777677788899999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--CCeeEEeecccccceeeEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--GKYGVGGICNGGGGASALV 400 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--~~~~l~~~~~~gg~~~a~v 400 (414)
|+||+|++|+.+++..++.||++++|+|++||++++|||.|++|+++++++++||+++. .+++|++.|.|||++.++|
T Consensus 336 d~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v 415 (442)
T 2wu9_A 336 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAV 415 (442)
T ss_dssp CEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEE
Confidence 99999999999999999999999999999999999999999999999999999999988 8899988899999999999
Q ss_pred EEEecce
Q 015003 401 LELMQAV 407 (414)
Q Consensus 401 l~~~~~~ 407 (414)
|++.+.+
T Consensus 416 ~~~~~~~ 422 (442)
T 2wu9_A 416 FERGDGV 422 (442)
T ss_dssp EEECSHH
T ss_pred EEecccc
Confidence 9987653
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-63 Score=497.49 Aligned_cols=383 Identities=35% Similarity=0.524 Sum_probs=338.4
Q ss_pred CccccCCCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcC----CCccccCeEEEEeecCCCCCCcHHHHH
Q 015003 6 PSESIKARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRAN----VKPLLVQEVFFGNVLSANLGQAPARQA 80 (414)
Q Consensus 6 ~~~~~~~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAg----i~~~~Id~vi~g~~~~~~~~~~~a~~v 80 (414)
|--..||++|+|||+++|||+++ .+.+++.++.+|+.+|+++||+|+| +++++||.+++|+..+++.+++++.++
T Consensus 3 ~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~v 82 (393)
T 1afw_A 3 SLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAA 82 (393)
T ss_dssp TTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHH
T ss_pred chhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHH
Confidence 33345678999999999999998 4888889999999999999999999 999999999999988776677889999
Q ss_pred HHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccc
Q 015003 81 ALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLW 160 (414)
Q Consensus 81 a~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (414)
+..+|+++.+|+++++++|+|++++|..|+++|++|++|++||+|+|.++..|+...+ .+ ....+.+...++
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~-----~~--~~~~~~~~~~g~- 154 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNP-----LG--MISSEELQKNRE- 154 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCT-----TC--SCCCHHHHHCTT-
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccc-----cc--cccchhhhhccc-
Confidence 9999996568999999999999999999999999999999999999998764432110 00 000001111344
Q ss_pred ccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHH
Q 015003 161 DVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAK 239 (414)
Q Consensus 161 ~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~ 239 (414)
.|..+..|+..|++|+++||+|+|+++++++++|++|..|++++.|.+||+|++++. ++ .+++|+.+|+ +|.|+
T Consensus 155 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~--~~---~~~~d~~~r~~~t~e~ 229 (393)
T 1afw_A 155 AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD--GS---ICQSDEGPRPNVTAES 229 (393)
T ss_dssp GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT--SC---EECSCSSCCSCCCHHH
T ss_pred ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC--Cc---eeccccccCCCCCHHH
Confidence 444446799999999999999999999999999999999999999999999987765 22 4889999998 99999
Q ss_pred HhcCCCCccCC-CccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCC
Q 015003 240 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLE 318 (414)
Q Consensus 240 ~~~~~~~~~~~-g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~ 318 (414)
++++||+|+++ |++|++|||+++|||+++||++++.+++++.+++++|.|++...+.|..+..++..+++++|+++|++
T Consensus 230 ~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~ 309 (393)
T 1afw_A 230 LSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQ 309 (393)
T ss_dssp HHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCC
T ss_pred HhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCC
Confidence 99999999767 89999999999999999999999999999999999999999998877767778899999999999999
Q ss_pred CCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceee
Q 015003 319 ASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398 (414)
Q Consensus 319 ~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a 398 (414)
++|||++|+|++|+.+++..+|.||++++|+|++||++++|||.|++|+++++++++||+++++ +++++|+|||++.+
T Consensus 310 ~~dId~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--gl~~~c~ggg~g~a 387 (393)
T 1afw_A 310 VQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI--GVVSMCIGTGMGAA 387 (393)
T ss_dssp GGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE--EEEEEEETTTEEEE
T ss_pred HHHCCEEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC--cEEEEeecccceEE
Confidence 9999999999999999999999999999999999999999999999999999999999998866 99999999999999
Q ss_pred EEEEE
Q 015003 399 LVLEL 403 (414)
Q Consensus 399 ~vl~~ 403 (414)
++||+
T Consensus 388 ~~~~~ 392 (393)
T 1afw_A 388 AIFIK 392 (393)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99997
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-62 Score=490.31 Aligned_cols=377 Identities=37% Similarity=0.544 Sum_probs=337.8
Q ss_pred CCCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRA-NVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dA-gi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~ 87 (414)
+|++|+|||+++|||+++ .+.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..+++. +++.+.+++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 357899999999999998 588888999999999999999999 99999999999998887654 578899999999997
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+++|+++++++|+|++.+|.+|+++|++|++|+|||+|+|.++..|+.... +... .+..++ |.....
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~------~~~~----~~~~~~---~~~~~~ 149 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV------DPNP----HMSLYA---AKASGM 149 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB------CCCG----GGGGTS---CGGGGS
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc------ccCc----cccccC---CcchhH
Confidence 679999999999999999999999999999999999999999875643210 1000 010111 112245
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCC--CCceeeecCCCccc-cCHHHHhcCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRG--KPFIIVDKDEGLEK-FDAAKLMKLR 244 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~--~p~~~~~~~~~~~~-~~~~~~~~~~ 244 (414)
++..|++|+++||+|++++++|++++|+++..|++++.|.++|+|++.+.+.+ +| |++|+++|+ +|.|+++++|
T Consensus 150 ~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~---fd~d~~~r~~~t~e~~~~~~ 226 (390)
T 1wdk_C 150 MGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKI---FDYDETIRPDTTLESLAALK 226 (390)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEE---ECSCTTCCTTCCHHHHHTSC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCccee---eccccccCCCCCHHHHhcCC
Confidence 89999999999999999999999999999999999999999999987654432 46 999999998 9999999999
Q ss_pred CCccC-CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCc
Q 015003 245 PSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 245 ~~~~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
|++++ +|++|++|||+++|||+++||++++.+++++.+++++|.|++...+.|..+..++..+++++|+++|++++|||
T Consensus 227 ~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 306 (390)
T 1wdk_C 227 PAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADID 306 (390)
T ss_dssp CSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred CcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCc
Confidence 99997 89999999999999999999999999999999999999999998877766677889999999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~v 400 (414)
++|+||+|+...+.+.|.||++ .+|+|++||++++|||.|++|+++++++++||+++++++++++.|++||++.++|
T Consensus 307 ~ve~~d~f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~~~~~ggG~~~a~~ 386 (390)
T 1wdk_C 307 FIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATV 386 (390)
T ss_dssp EEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEE
T ss_pred EEEeccCCHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCCCEEEEEecccchheEEEE
Confidence 9999999999999999999999 6789999999999999999999999999999999999999999999999999999
Q ss_pred EEE
Q 015003 401 LEL 403 (414)
Q Consensus 401 l~~ 403 (414)
||+
T Consensus 387 ~~~ 389 (390)
T 1wdk_C 387 FER 389 (390)
T ss_dssp EEC
T ss_pred EEe
Confidence 986
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-62 Score=490.31 Aligned_cols=377 Identities=33% Similarity=0.479 Sum_probs=319.0
Q ss_pred CCCceEEEeeecCcccc-CCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCC-CCcHHHHHHHHCCCC
Q 015003 11 KARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSANL-GQAPARQAALGAGIP 87 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lgl~ 87 (414)
|+++|+|||+++|||+| +.+++++.+..+|+.+|+++||+| +|+++++||.+++|+..++.. +++++.+++..+|++
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 77899999999999995 677888999999999999999999 999999999999999887653 688999999999996
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
..+|+++++.+|+|++.+|..|+++|++|++|+|||+|+|+++..|+..... . +..++ .+..++....
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~----~----~~~~~----~~~~~~~~~~ 152 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGG----A----WATDP----ETNYRIGFVP 152 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-------------------CCCCT----TTCCCCCCHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCccccccc----c----cccCc----hhhccccccC
Confidence 6799999999999999999999999999999999999999999876543211 0 01111 1223344467
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (414)
++..|+.++++|+++++++++|++.+|++|..+..++.|.++|+|++.++.. ..+++|+++|+ +|.|+++++||+
T Consensus 153 ~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~----~~~~pd~~~r~~~t~e~l~~~~~v 228 (407)
T 3svk_A 153 QGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGL----VILDHDEHMRPDTTMEGLAKLKTA 228 (407)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSC----EEECSCTTCCTTCCHHHHHTSCBS
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCc----eeeCCccccCCCCCHHHHhhCCCe
Confidence 8999999999999999999999999999999999999999999998754431 24789999997 999999999999
Q ss_pred ccCCCc---------------------cccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchH
Q 015003 247 FKEGGS---------------------VTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPS 305 (414)
Q Consensus 247 ~~~~g~---------------------~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (414)
|++.|. +|++|||+++|||+++||++++.+++++.+++++|.+++...+++..+..++.
T Consensus 229 f~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~ 308 (407)
T 3svk_A 229 FDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPT 308 (407)
T ss_dssp CC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHH
T ss_pred ecCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHH
Confidence 986654 39999999999999999999999999999999999999998888777778889
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCee
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~ 385 (414)
.+++++|+++|++++|||++++||+|+.+.+.+.|.||++++|+|++||++++|||+|++|+++++++++||++++++++
T Consensus 309 ~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~~~g 388 (407)
T 3svk_A 309 PATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNARRA 388 (407)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecccccceeeEEEEE
Q 015003 386 VGGICNGGGGASALVLEL 403 (414)
Q Consensus 386 l~~~~~~gg~~~a~vl~~ 403 (414)
|++.|+|||++.++|||+
T Consensus 389 l~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 389 LITLCIGGGMGVATIIER 406 (407)
T ss_dssp EEEEECSSSCEEEEEEEE
T ss_pred EEEeeccCcceEEEEEEc
Confidence 999999999999999997
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-62 Score=487.67 Aligned_cols=388 Identities=50% Similarity=0.791 Sum_probs=345.0
Q ss_pred CCCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 11 KARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 11 ~~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
++++|+|||+++|||+++.+.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..++..+++.+..++..+|++.++
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 34789999999999999988888899999999999999999999999999999999888777889999999999996568
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGV 170 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (414)
|+++++++|+|++.||..|+++|++|++|+|||+|+|.++..|....+ .+..++.....+.+..+++++++....|++
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNR--GSTPYGGVKLEDLIVKDGLTDVYNKIHMGS 163 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECS--SBCCTTCEEEEEHHHHHTTEETTTTEEHHH
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccc--cccccccccccccccccccccccccchHHH
Confidence 999999999999999999999999999999999999998875542111 000011101112222345666776778999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCcc-C
Q 015003 171 CAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK-E 249 (414)
Q Consensus 171 ~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 249 (414)
.|++|+.+||+|+++++++++++|+++..|+..+.|+++|+|+++++. ++|...+++|+.+++++.|.+.+.||+|. +
T Consensus 164 ~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~ 242 (395)
T 2ib8_A 164 CAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-GQPDVVVKEDEEYKRVDFSKVPKLKTVFQKE 242 (395)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-TSCCEEECSCSGGGSCCTTTGGGSCCTTCSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-CCcceeeccccccccCCHHHHhcCCccccCC
Confidence 999999999999999999999999999999999999999999998876 77655689999999889999999999994 4
Q ss_pred CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 250 GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 250 ~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+|++|++|||+++|||+++||++++.+++++.+++++|.|++....+|..+..++..+++++|+++|++++|||++|+||
T Consensus 243 ~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~~D 322 (395)
T 2ib8_A 243 NGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNE 322 (395)
T ss_dssp SCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECC
T ss_pred CCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcCEEEEcc
Confidence 79999999999999999999999999999999999999999987656655666788999999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|+...+..+|.||++++|+|++||++++|||.|++|+++++++++||+. +++++++.|++||++.+++||+
T Consensus 323 ~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 323 AFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--GEYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--TCEEEEEEEETTTEEEEEEEEE
T ss_pred ccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--CCceEEEEecccCHhheEEEEc
Confidence 99999999999999999999999999999999999999999999999996 6789999999999999999997
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-61 Score=481.51 Aligned_cols=381 Identities=39% Similarity=0.587 Sum_probs=332.4
Q ss_pred CCceEEEeeecCccccC-CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 12 ARDVCIVGVARTPMGGF-LGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~-~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
+++|+|+|+++|||+++ .+..++.++.+|+.+|+++||+|+|+++++||.+++|+..+++.+++.+..++..+|++.++
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~ 108 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV 108 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence 36799999999999986 35677899999999999999999999999999999999887665677888899999996568
Q ss_pred ceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccc-cccccccccCCchH
Q 015003 91 VCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGML-KDGLWDVYNDFGMG 169 (414)
Q Consensus 91 ~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 169 (414)
|+++++++|+|++.||..|+++|++|++|+|||+|+|.++..|+.... .. .+.+. .+..++++ ..++
T Consensus 109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~-----~~-----~~~~~~~~~~~~~~--~~~g 176 (418)
T 2iik_A 109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG-----NI-----TSRLMEKEKARDCL--IPMG 176 (418)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC----------CC-----CTTGGGCHHHHGGG--SCHH
T ss_pred eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc-----cc-----chhhhccccccccc--ccHH
Confidence 999999999999999999999999999999999999999886542210 00 00000 11122222 4588
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCC---ceeeecCCCccc-cCHHHHhcCCC
Q 015003 170 VCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKP---FIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 170 ~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p---~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
..+++++++||+|+|++++|++++|++|..|+..+.|+++|+|++++....+| -..+++|+.+|+ +|.|+++++||
T Consensus 177 ~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~ 256 (418)
T 2iik_A 177 ITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKP 256 (418)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCC
Confidence 99999999999999999999999999999999888999999988653111111 134788999998 99999999999
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCcee
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|+++|++|++||+.++|||+|+||++++.+++++.+++++|.|++.....|..+..++..+++++|+++|++++|||++
T Consensus 257 vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~v 336 (418)
T 2iik_A 257 AFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336 (418)
T ss_dssp SSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCee
Confidence 99988999999999999999999999999999999999999999998876666666778899999999999999999999
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCC-eeEEeecccccceeeEEEEEe
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGK-YGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~-~~l~~~~~~gg~~~a~vl~~~ 404 (414)
|+|++|+...+..++.||++++|+|++||.+++|||.|++|+++++++++||++++++ ++++++|++||++.++|||+.
T Consensus 337 E~h~af~~~~~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 337 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp EECCSBHHHHHHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred eeeccchHHHHHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCCCeeeEEEEeeccchhheEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999887 899999999999999999975
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=400.86 Aligned_cols=366 Identities=16% Similarity=0.084 Sum_probs=268.9
Q ss_pred CCceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCC------------CCCCcHHHH
Q 015003 12 ARDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSA------------NLGQAPARQ 79 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~------------~~~~~~a~~ 79 (414)
+|+++|||+++||+.+..+.+++.++.||+.+|++.||+|+|+++++||.+|.|+.... ....+.+..
T Consensus 17 PRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 96 (520)
T 4egv_A 17 PRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS 96 (520)
T ss_dssp TTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred CCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence 46788999999999887777888999999999999999999999999988776654321 124567888
Q ss_pred HHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhc-c--CCCCCCcccccccc
Q 015003 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARK-G--SRLGHDTIVDGMLK 156 (414)
Q Consensus 80 va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~-~--~~~~~~~~~~~~~~ 156 (414)
++..+|+++ .+.++++.+|+|+++++..|+++|++|++|+||++|+|+|++.|+....... . ...........+..
T Consensus 97 va~~lGl~~-~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (520)
T 4egv_A 97 VARNIGADP-AHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGY 175 (520)
T ss_dssp HHHHHTCCC-SEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----------------------------
T ss_pred HHHHcCCCC-ceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCcccccccccccccccc
Confidence 999999984 7888999999999999999999999999999999999999997764332110 0 00000000000001
Q ss_pred c----ccccccc----CCchHHHHHHHHHHcCCCHH----HHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCce
Q 015003 157 D----GLWDVYN----DFGMGVCAEICANKHTITRD----EQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFI 224 (414)
Q Consensus 157 ~----~~~~~~~----~~~~~~~a~~~~~~~g~t~~----~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~ 224 (414)
. .+..+|. ...+.+.+++++.+|+++++ ++..++++.++++..|+.
T Consensus 176 ~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~---------------------- 233 (520)
T 4egv_A 176 DGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPY---------------------- 233 (520)
T ss_dssp -----CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTT----------------------
T ss_pred chhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCcc----------------------
Confidence 1 1112222 13467778888899998865 456677788887776654
Q ss_pred eeecCCCccc-cCHHHHhcCCCCccC--CCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc-
Q 015003 225 IVDKDEGLEK-FDAAKLMKLRPSFKE--GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF- 300 (414)
Q Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~~~~~--~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~- 300 (414)
+.+++ +|.|++...+|.+.. ++..|+.|||.++|||+|+||+|+++++++|.+++++|.+++.....+..+
T Consensus 234 -----a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~ 308 (520)
T 4egv_A 234 -----SSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLL 308 (520)
T ss_dssp -----SSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGG
T ss_pred -----ccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccc
Confidence 33344 899999976665421 346688999999999999999999999999999988888887776544433
Q ss_pred -------ccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCC---CCcCCCCCccccCCCccchHHHHH
Q 015003 301 -------TTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDP---EQVNAHGGAVSLGHPLGCSGARIL 370 (414)
Q Consensus 301 -------~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~---~~vn~~Gg~~~~Gh~~gasG~~~l 370 (414)
..++..+++++|+++|++++|||++|+||+|++..+.++|.||+++ .++|++||++++|||.+++|+..+
T Consensus 309 ~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~ 388 (520)
T 4egv_A 309 ERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGI 388 (520)
T ss_dssp GCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHH
T ss_pred cccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHH
Confidence 2355789999999999999999999999999999999999999964 489999999999999999999999
Q ss_pred HHHHHHHHhcCCCeeEEeecccccc-eeeEEEEEec
Q 015003 371 VTLLGVLRHKKGKYGVGGICNGGGG-ASALVLELMQ 405 (414)
Q Consensus 371 ~~~~~ql~~~~~~~~l~~~~~~gg~-~~a~vl~~~~ 405 (414)
+++++|||++.++++|.+..++-.. .++++|.+..
T Consensus 389 ~~~v~~lr~~~~~~~L~~~~gg~~~~~~~~~l~~~~ 424 (520)
T 4egv_A 389 AEAVNEMRDKPGQFALVGANGGIASKYSVGIYSTEP 424 (520)
T ss_dssp HHHHHHHHHSTTCEEEEEEEETTTTEEEEEEEESSC
T ss_pred HHHHHHHhcCCCCceEEeCCCCeeeeeeEEEEcCCC
Confidence 9999999999999999864333332 3455555543
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=283.98 Aligned_cols=270 Identities=20% Similarity=0.246 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----------------C---------CCcHHHHHHHHCCCCC
Q 015003 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGAGIPN 88 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~va~~lgl~~ 88 (414)
+|+.+|+++||+|||+++++|| .|++|+..+.. . ....+.+++..+|++
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK- 157 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC-
Confidence 8999999999999999999999 79999876531 0 124688999999995
Q ss_pred CcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCch
Q 015003 89 SVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGM 168 (414)
Q Consensus 89 ~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (414)
+|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |..+.. |
T Consensus 158 -gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~~-----------------------------~ 206 (416)
T 1e5m_A 158 -GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT-PLSYAG-----------------------------F 206 (416)
T ss_dssp -SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH-----------------------------H
T ss_pred -CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHH-----------------------------H
Confidence 699999999999999999999999999999999999998543 321110 0
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCcc
Q 015003 169 GVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFK 248 (414)
Q Consensus 169 ~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (414)
.+. +.+..+ ...++..|+| |+++
T Consensus 207 --------~~~------------------------~~ls~~---~~~p~~~~rp---fd~~------------------- 229 (416)
T 1e5m_A 207 --------ASA------------------------RALSFR---NDDPLHASRP---FDKD------------------- 229 (416)
T ss_dssp --------HHT------------------------TCBCCC---TTCGGGTCCT---TBTT-------------------
T ss_pred --------HHc------------------------CCccCC---CCCCcccccc---CccC-------------------
Confidence 000 011100 0012345666 5554
Q ss_pred CCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCCCc
Q 015003 249 EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 249 ~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~DId 323 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|++++|||
T Consensus 230 ~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 302 (416)
T 1e5m_A 230 RDGFV-------MGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302 (416)
T ss_dssp CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred CCCce-------eeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCC
Confidence 45555 8999999999999999999999999999999988752 22334568899999999999999999
Q ss_pred eeeccccchhH----H-HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------------
Q 015003 324 YYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (414)
Q Consensus 324 ~~~~hd~~~~~----~-~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------------- 381 (414)
++++|++++.. + ..+.+.+|....++++++.|..+||+.||+|+..+++++++|+++.
T Consensus 303 ~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~ 382 (416)
T 1e5m_A 303 YINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLD 382 (416)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSC
T ss_pred EEEEECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 99999999863 2 2234556665557888888999999999999999999999999752
Q ss_pred ----------CCeeEEeecccccceeeEEEEEe
Q 015003 382 ----------GKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 382 ----------~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
.++.+.++++.||+++++||+..
T Consensus 383 ~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 383 YVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp CCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred ccCCccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 24677888999999999999863
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=282.55 Aligned_cols=271 Identities=24% Similarity=0.298 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCC--------------------------CCCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~va~~lgl 86 (414)
...|+.+|+++||+|||+++++|| .+++|+..+. ......+..++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 356899999999999999999999 4888766421 1123467889999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++. |.....-.
T Consensus 168 ~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~~~-------------------------- 218 (427)
T 3ho9_A 168 R--GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGVGGFG-------------------------- 218 (427)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHHHH--------------------------
T ss_pred C--CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHHHH--------------------------
Confidence 5 799999999999999999999999999999999999999986 43321100
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
..+.+..+ ...++..++| |+.+
T Consensus 219 -----------------------------------~~~~ls~~---~~~~~~~~~p---fd~~----------------- 240 (427)
T 3ho9_A 219 -----------------------------------AARALSTR---NDNPQAASRP---WDKE----------------- 240 (427)
T ss_dssp -----------------------------------HTTCBCCC---TTCHHHHCCT---TBTT-----------------
T ss_pred -----------------------------------hccCcccC---CCCCCcccCC---ccCC-----------------
Confidence 00000000 0001223455 4444
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. .....+..++++++|+++|++++|
T Consensus 241 --~~G~v-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 311 (427)
T 3ho9_A 241 --RDGFV-------LGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 311 (427)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------eeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 45666 8999999999999999999999999999999887632 223445689999999999999999
Q ss_pred Cceeeccccch-----hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFS-----VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~-----~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||++++|.+++ .....+.+.||...++++++++|..+||+.||+|+.++++++++|+.+
T Consensus 312 Id~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~ 391 (427)
T 3ho9_A 312 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCD 391 (427)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCC
T ss_pred ccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 99999995544 456667788888878999999999999999999999999999999876
Q ss_pred ------------CCCeeEEeecccccceeeEEEEE
Q 015003 381 ------------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+.++++.||+++++||++
T Consensus 392 ~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 392 LDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp CBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 34567888999999999999985
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=278.40 Aligned_cols=275 Identities=24% Similarity=0.312 Sum_probs=213.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cC----eEEEEeecC--------------------------CCCCCcHHHHHHHHC
Q 015003 36 SATKLGSIAIECALKRANVKPLL-VQ----EVFFGNVLS--------------------------ANLGQAPARQAALGA 84 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~-Id----~vi~g~~~~--------------------------~~~~~~~a~~va~~l 84 (414)
...+|+.+|+++||+|||+++++ || .+++|+..+ ....+..+..|+..|
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 35689999999999999999998 88 577776532 122344678899999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (414)
|++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 166 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~-------------------------- 216 (428)
T 3kzu_A 166 KLR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RISLAG-------------------------- 216 (428)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred CCC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHHHHH--------------------------
Confidence 995 699999999999999999999999999999999999998654 322211
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
+. . ...++.+ -...+...++| |+.+
T Consensus 217 ------------------------~~---------~--~~~ls~~--~~~~~~~~~~p---fd~~--------------- 241 (428)
T 3kzu_A 217 ------------------------FA---------A--CKALSTE--RNDDPTAASRP---YDED--------------- 241 (428)
T ss_dssp ------------------------HH---------H--TTCBCCS--CTTSGGGTCCT---TBTT---------------
T ss_pred ------------------------HH---------H--ccccccC--ccCCcccccCC---cccC---------------
Confidence 00 0 0011100 00001234455 4444
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEA 319 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~ 319 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+. +.....+..++++++|+++|+++
T Consensus 242 ----~~G~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~ 310 (428)
T 3kzu_A 242 ----RDGFV-------MGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVP 310 (428)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCcee-------ecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 44555 899999999999999999999999999999988763 22333466899999999999999
Q ss_pred CCCceeeccccchhHH----HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 320 SQIDYYEINEAFSVVA----IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 320 ~DId~~~~hd~~~~~~----~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
+|||++++|++++... ..+.+.+|...+++|+++++.++|||.|++|+..++++++||+.+
T Consensus 311 ~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~ 390 (428)
T 3kzu_A 311 DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQT 390 (428)
T ss_dssp GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCC
T ss_pred HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCC
Confidence 9999999997777433 334555677777899999999999999999999999999999975
Q ss_pred ------------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 ------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 ------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+.++++.||+++++||+...
T Consensus 391 ~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 391 RIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp SSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 1245678889999999999998753
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-32 Score=273.00 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCC-----------------CCC---------CcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSA-----------------NLG---------QAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~-----------------~~~---------~~~a~~va~~lgl 86 (414)
..+|+.+|+++||+|||+++++|| .|++|+..+. ... ...+..++..||+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 456999999999999999999999 8999976421 111 2247789999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....-
T Consensus 154 ~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-~~~~~~~--------------------------- 203 (413)
T 3o04_A 154 K--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPIT-KMSLAGF--------------------------- 203 (413)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHHH---------------------------
T ss_pred C--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCC-HHHHHHH---------------------------
Confidence 5 699999999999999999999999999999999999999765 3222110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
...+.+.. ...++..++| |+.+
T Consensus 204 ----------------------------------~~~~~ls~----~~~p~~~~~p---fd~~----------------- 225 (413)
T 3o04_A 204 ----------------------------------TANKALSL----NPDPETACRP---FDKD----------------- 225 (413)
T ss_dssp ----------------------------------HHTTCBCC----CCCTTTSCCT---TBTT-----------------
T ss_pred ----------------------------------HhcccccC----CCCCCCCcCC---CcCC-----------------
Confidence 00001111 0112345666 5544
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|++++|
T Consensus 226 --~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~d 296 (413)
T 3o04_A 226 --RDGFI-------IGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDK 296 (413)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------EeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 45565 8999999999999999999999999999999887632 222334678999999999999999
Q ss_pred CceeeccccchhH----HHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------
Q 015003 322 IDYYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------- 380 (414)
Q Consensus 322 Id~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------- 380 (414)
||++++|.+++.. +.. +.+.++...++++++++|..+|||.||+|+.++++++++|+.+
T Consensus 297 Id~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~ 376 (413)
T 3o04_A 297 VDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCD 376 (413)
T ss_dssp CCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCC
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCC
Confidence 9999999998863 222 2344566666899999999999999999999999999999865
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+..+++.||+++++||+..+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 377 LDYVPNEAREANVNVVISNSFGFGGHNATLVFKRIE 412 (413)
T ss_dssp SCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cccCCCcccCCCCCEEEEeCccCCceEEEEEEEeCC
Confidence 1245678889999999999999754
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=278.96 Aligned_cols=274 Identities=23% Similarity=0.271 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCC--------------------------CCCCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLV-Q----EVFFGNVLSA--------------------------NLGQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~I-d----~vi~g~~~~~--------------------------~~~~~~a~~va~~lg 85 (414)
..+|+.+|+++||+|||+++++| | .+++|+..+. ...+..+..++..||
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 46799999999999999999999 7 6888876321 123346788999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++. |..+..-
T Consensus 182 l~--Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~-~~~~~~~-------------------------- 232 (451)
T 4ddo_A 182 FR--GPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-KVSLGGF-------------------------- 232 (451)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHHH--------------------------
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccC-HHHHHHH--------------------------
Confidence 95 699999999999999999999999999999999999999876 3322110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
. ........ |..+ +...++| |+.+
T Consensus 233 ------------------------~------~~~~ls~~-~~~~------~~~~~~p---fd~~---------------- 256 (451)
T 4ddo_A 233 ------------------------A------AARALSTG-FSEE------PVRASRP---FDRD---------------- 256 (451)
T ss_dssp ------------------------H------HTTCBCCS-CTTS------GGGSCCT---TBTT----------------
T ss_pred ------------------------H------HHhhhccC-CCcC------ccccccc---cccC----------------
Confidence 0 00000000 1111 1234555 4444
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+|+||++.+.+++++.+++++|.|++...+.... ......++++++|+++|++++
T Consensus 257 ---~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~ 326 (451)
T 4ddo_A 257 ---RDGFV-------MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPE 326 (451)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCcE-------EeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 44555 899999999999999999999999999999988753221 112447899999999999999
Q ss_pred CCceeeccccchhH----HHH-HHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 321 QIDYYEINEAFSVV----AIA-NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 321 DId~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
|||+|++|.+++.. +.. +.+.++. ..++++++.|..+|||.||+|+.++++++++|+.+
T Consensus 327 dId~ve~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~ 405 (451)
T 4ddo_A 327 QVDYVNAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAA 405 (451)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGG
T ss_pred HcCEEEecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccc
Confidence 99999999999863 222 3344565 34678888899999999999999999999999865
Q ss_pred -------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 -------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 -------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
..++.+..+++.||+++++||+....
T Consensus 406 ~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~ 444 (451)
T 4ddo_A 406 DGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPS 444 (451)
T ss_dssp TTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC
T ss_pred ccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCC
Confidence 12456788899999999999998654
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-32 Score=272.07 Aligned_cols=270 Identities=20% Similarity=0.247 Sum_probs=211.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC--------------------------CCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSANL--------------------------GQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~va~~lg 85 (414)
+..+|+.+|+++||+|||+++++|| .+++|+..+++. .+..+.+++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 3567999999999999999999999 688887654321 2347789999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++|+++|+|++.||..|+++|++|++|+|||+|+|.++..+.....
T Consensus 171 l~--gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~--------------------------- 221 (428)
T 3mqd_A 171 IK--GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFD--------------------------- 221 (428)
T ss_dssp CC--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHH---------------------------
T ss_pred CC--CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHH---------------------------
Confidence 94 7999999999999999999999999999999999999997751110000
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
+. +.+..+ ....++..|+| |+.+
T Consensus 222 ------------~~------------------------~~ls~~--~~~~p~~~~rp---fd~~---------------- 244 (428)
T 3mqd_A 222 ------------AM------------------------GAMSSK--YNDTPSTASRA---YDKN---------------- 244 (428)
T ss_dssp ------------HT------------------------TCBCCT--TTTSGGGSCCT---TBTT----------------
T ss_pred ------------Hh------------------------hhhccc--ccCCcccccCc---ccCC----------------
Confidence 00 000100 00012445666 5555
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc---cccchHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+.... ...++.++++++|+ |++ +||
T Consensus 245 ---~~G~v-------~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dI 311 (428)
T 3mqd_A 245 ---RDGFV-------IAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKI 311 (428)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCC
T ss_pred ---CCCcc-------cccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-ccc
Confidence 56676 799999999999999999999999999999998875432 34467899999999 999 999
Q ss_pred ceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+|+.|.+++.. ...+.+.|+...+.+++++.|..+||+.||+|++.++.++++|+.+
T Consensus 312 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 391 (428)
T 3mqd_A 312 DYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFAD 391 (428)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTT
T ss_pred CEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCccccc
Confidence 999999888852 2334556775455578899999999999999999999999999854
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+..+++.||+++++||+..
T Consensus 392 ~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 392 MPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp SCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCccCCccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 124567888999999999999874
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-33 Score=277.44 Aligned_cols=272 Identities=24% Similarity=0.355 Sum_probs=213.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
...+|+.+|+++||+|||+++++||. +++|+..+++ .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 6777654431 01246788999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....-
T Consensus 150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~~-------------------------- 200 (408)
T 1j3n_A 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMAIGAF-------------------------- 200 (408)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHHH--------------------------
T ss_pred CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHHHHH--------------------------
Confidence 95 699999999999999999999999999999999999998655 3221100
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
.. .+.++.. ...++..|+| |+++
T Consensus 201 -----~~------------------------------~~~ls~~---~~~p~~~~~p---fd~~---------------- 223 (408)
T 1j3n_A 201 -----AV------------------------------MRALSTR---NEEPEKASRP---FTLS---------------- 223 (408)
T ss_dssp -----HH------------------------------TTCBCCC---TTCHHHHCCT---TBTT----------------
T ss_pred -----Hh------------------------------cccccCC---CCCCCcCccc---CcCC----------------
Confidence 00 0000000 0001223445 4443
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. .....+..++++++|+++|++++
T Consensus 224 ---~dg~v-------~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~ 293 (408)
T 1j3n_A 224 ---RDGFV-------MGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPE 293 (408)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCceE-------EeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 44555 8999999999999999999999999999999887642 22334567899999999999999
Q ss_pred CCceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc---------------
Q 015003 321 QIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK--------------- 380 (414)
Q Consensus 321 DId~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------- 380 (414)
|||++++|++++.. ...+.+.||...++++++++|..+||+.+++|+..+++++++|+++
T Consensus 294 dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~ 373 (408)
T 1j3n_A 294 QVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPEL 373 (408)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTS
T ss_pred HcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Confidence 99999999999975 4556677887777899999999999999999999999999999974
Q ss_pred -----------CCCeeEEeecccccceeeEEEEE
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.+..+++.||+++++||+.
T Consensus 374 ~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 374 DLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp CSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 13567888899999999999985
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=271.69 Aligned_cols=272 Identities=20% Similarity=0.261 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
..+|+.+|+++||+|||+++++|| .|++|+..+.. .....+.+++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 457999999999999999999999 99999876531 112467899999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 178 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~---------------------------- 226 (437)
T 2gqd_A 178 K--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMAIAG---------------------------- 226 (437)
T ss_dssp C--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH----------------------------
T ss_pred C--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH----------------------------
Confidence 5 699999999999999999999999999999999999998755 322110
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPS 246 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 246 (414)
+. ..+.+.. ...++..|+| |+++
T Consensus 227 ----------------------~~-----------~~~~ls~----~~~p~~~~~p---fd~~----------------- 249 (437)
T 2gqd_A 227 ----------------------FS-----------ASRALST----NDDIETACRP---FQEG----------------- 249 (437)
T ss_dssp ----------------------HH-----------HTTCBCC----CCCTTTSSCT---TCTT-----------------
T ss_pred ----------------------HH-----------hccCccC----CCCCccccCC---CCCC-----------------
Confidence 00 0001110 0012345566 5544
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQ 321 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~D 321 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++|
T Consensus 250 --~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~d 320 (437)
T 2gqd_A 250 --RDGFV-------MGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320 (437)
T ss_dssp --CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGG
T ss_pred --CCCce-------eeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhh
Confidence 44555 89999999999999999999999999999999887532 12334578999999999999999
Q ss_pred CceeeccccchhH----H-HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC---------------
Q 015003 322 IDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK--------------- 381 (414)
Q Consensus 322 Id~~~~hd~~~~~----~-~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~--------------- 381 (414)
||+|++|++++.. + ..+.+.||....++++++.|..+||+.+|+|+..+++++++|+.+.
T Consensus 321 Id~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 400 (437)
T 2gqd_A 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECD 400 (437)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCC
T ss_pred CCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 9999999999974 2 2344556765567888888999999999999999999999999752
Q ss_pred ------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+..+++.||+++++||+..+
T Consensus 401 ~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 401 LDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp SBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECCC
T ss_pred cccCCCccccCCCCEEEEccCcCCCeeEEEEEEecc
Confidence 246778889999999999998753
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=271.55 Aligned_cols=270 Identities=21% Similarity=0.223 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANVKP-LLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~-~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
..+|+.+|+++||+|||+++ ++|| .|++|+..+++ .....+.+++..+|
T Consensus 97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 45699999999999999998 8888 58888775532 12347889999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 177 l~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~--------------------------- 226 (438)
T 2iwz_A 177 LK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSLAG--------------------------- 226 (438)
T ss_dssp CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHHHH---------------------------
Confidence 95 699999999999999999999999999999999999998654 422110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
+.+ .+.+.++ ..++..|+| |+++
T Consensus 227 ----------~~~------------------------~~~ls~~----~~p~~~~~p---fd~~---------------- 249 (438)
T 2iwz_A 227 ----------FSR------------------------ARALSTN----SDPKLACRP---FHPK---------------- 249 (438)
T ss_dssp ----------HHH------------------------TTCBCCC----SCTTTSCCT---TCTT----------------
T ss_pred ----------HHh------------------------cCCcCCC----CCCCccccc---CCCC----------------
Confidence 000 0111110 112455677 5555
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. .....+..++++++|+++|++++
T Consensus 250 ---~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~ 319 (438)
T 2iwz_A 250 ---RDGFV-------MGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPE 319 (438)
T ss_dssp ---CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGG
T ss_pred ---CCCEE-------eeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 55665 8999999999999999999999999999999987752 22334567899999999999999
Q ss_pred CCceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------
Q 015003 321 QIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (414)
Q Consensus 321 DId~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------- 381 (414)
|||++++|++++.. +. .+.+.||....++++++.|..+||+.||+|+..+++++++|+.+.
T Consensus 320 dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~ 399 (438)
T 2iwz_A 320 EISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEF 399 (438)
T ss_dssp GCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTC
T ss_pred HcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 99999999999874 22 234456655557888888999999999999999999999999752
Q ss_pred ----------------CCeeEEeecccccceeeEEEEE
Q 015003 382 ----------------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 ----------------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++++..+++.||+++++||++
T Consensus 400 ~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 400 DLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp CSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 3457788899999999999985
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-31 Score=267.72 Aligned_cols=268 Identities=21% Similarity=0.256 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCC--------------------------CCCCcHHHHHHHHCC
Q 015003 37 ATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSA--------------------------NLGQAPARQAALGAG 85 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi-~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~va~~lg 85 (414)
..+|+.+|+++||+|||+ ++++|| .+++|+..+. ...+..+.+++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 456999999999999999 788888 7888876532 012357889999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++|++|+|||+|+|.++. .....-
T Consensus 157 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~--~~~~~~-------------------------- 206 (412)
T 4ewg_A 157 LK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSG--PAVAVF-------------------------- 206 (412)
T ss_dssp CC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHHH--------------------------
T ss_pred CC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCH--HHHHHH--------------------------
Confidence 95 699999999999999999999999999999999999999653 211100
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
.....+... ...++..|+| |+++
T Consensus 207 -----------------------------------~~~~~l~~~---~~~p~~~~rp---fd~~---------------- 229 (412)
T 4ewg_A 207 -----------------------------------DTLYATSTR---NDEPHLTPRP---FDAK---------------- 229 (412)
T ss_dssp -----------------------------------HTTTCBCCC---TTCGGGCCCT---TBTT----------------
T ss_pred -----------------------------------HHhhccccC---CCCCCCCCCC---CCCC----------------
Confidence 000001100 0112345666 5554
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC---ccccchHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE---WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~---~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... ....+..++++++|+++|++++||
T Consensus 230 ---~~G~~-------~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dI 299 (412)
T 4ewg_A 230 ---RDGLV-------VGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAI 299 (412)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGE
T ss_pred ---CCCCc-------eECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence 55666 79999999999999999999999999999999887432 123456799999999999999999
Q ss_pred ceeeccccchhH----HHHH-HHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSVV----AIAN-QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~~----~~~~-~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+|+.|...+.. +... .+.++ ++++++..|..+|||.||+|+.++++++++|+.+
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~~~---~~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~ 376 (412)
T 4ewg_A 300 AYVNAHGTSTDRGDVAESQATARTFG---ERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAP 376 (412)
T ss_dssp EEEECCCCCCHHHHHHHHHHHHHHHC---TTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC
T ss_pred CEEEccCCCCccccHHHHHHHHHHcC---CCCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccc
Confidence 999999998863 3333 33344 2366677788899999999999999999999864
Q ss_pred -----------CCCeeEEeecccccceeeEEEEEe
Q 015003 381 -----------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 381 -----------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..++.+.++++.||+++++||++.
T Consensus 377 ~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 377 LDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp CEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred cccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 124567888999999999999874
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.4e-31 Score=266.37 Aligned_cols=272 Identities=22% Similarity=0.255 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------CC-------------Cc-HHH----HHH
Q 015003 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------LG-------------QA-PAR----QAA 81 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------~~-------------~~-~a~----~va 81 (414)
.+|+.+|+++||+|||+++++|| .|++|+..+.+ .+ ++ .+. +++
T Consensus 74 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia 153 (424)
T 1tqy_A 74 SQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVA 153 (424)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHH
Confidence 56999999999999999999999 59999876532 00 11 133 899
Q ss_pred HHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccc
Q 015003 82 LGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (414)
Q Consensus 82 ~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (414)
..||++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.+.. |.....
T Consensus 154 ~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~----------------------- 207 (424)
T 1tqy_A 154 WAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVVAC----------------------- 207 (424)
T ss_dssp HHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH-----------------------
T ss_pred HhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHHHH-----------------------
Confidence 999995 699999999999999999999999999999999999999755 322110
Q ss_pred cccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHh
Q 015003 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (414)
Q Consensus 162 ~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (414)
+... +.+..+ ...++..|+| |+++
T Consensus 208 --------------~~~~------------------------~~ls~~---~~~p~~~~rp---fd~~------------ 231 (424)
T 1tqy_A 208 --------------FDAI------------------------RATTAR---NDDPEHASRP---FDGT------------ 231 (424)
T ss_dssp --------------HHHT------------------------TCBCCC---CSCGGGCCCT---TBTT------------
T ss_pred --------------HHhh------------------------ccccCC---CCCCCCCccC---CCCC------------
Confidence 0000 011100 0012345666 5554
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcC
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAG 316 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aG 316 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... ..+....++++++|+++|
T Consensus 232 -------~~G~v-------~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ag 297 (424)
T 1tqy_A 232 -------RDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESR 297 (424)
T ss_dssp -------CCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHT
T ss_pred -------CCcee-------eecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 45555 89999999999999999999999999999998877432 222456789999999999
Q ss_pred CCCCCCceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------
Q 015003 317 LEASQIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------- 380 (414)
Q Consensus 317 l~~~DId~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------- 380 (414)
++++|||++++|++++.. +. .+.+.||....++++++.|..+||+.+++|+..+++++++|+++
T Consensus 298 l~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~ 377 (424)
T 1tqy_A 298 TDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTS 377 (424)
T ss_dssp CCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSB
T ss_pred CCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCC
Confidence 999999999999999863 33 23444565445677778888899999999999999999999975
Q ss_pred ----------------CCCeeEEeecccccceeeEEEEEec
Q 015003 381 ----------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 ----------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..++.+..+++.||+++++||+..+
T Consensus 378 ~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 378 DPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp BTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 2456788889999999999999754
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=8.1e-31 Score=263.72 Aligned_cols=271 Identities=21% Similarity=0.188 Sum_probs=208.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
...+|+.+|+++||+|||+++++|| .+++|+..+++ ..+..+.+++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 3567999999999999999999999 78888775432 13457889999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYND 165 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (414)
++ +|+++++++|+|++.||..|+++|++| +|+|||+|+|.+.. |.....
T Consensus 158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~-~~~~~~--------------------------- 206 (415)
T 1tqy_B 158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PWGWVS--------------------------- 206 (415)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HHHHHH---------------------------
T ss_pred CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCC-HHHHHH---------------------------
Confidence 95 699999999999999999999999999 99999999998544 322110
Q ss_pred CchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCC
Q 015003 166 FGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245 (414)
Q Consensus 166 ~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (414)
+. ..+.+.. ...++..++| |+++
T Consensus 207 -----------------------~~-----------~~~~ls~----~~~~~~~~~p---fd~~---------------- 229 (415)
T 1tqy_B 207 -----------------------QI-----------ASGRIST----ATDPDRAYLP---FDER---------------- 229 (415)
T ss_dssp -----------------------HH-----------TTSCBCC----CSCGGGSCCT---TSTT----------------
T ss_pred -----------------------HH-----------hccCccC----CCCCCCCcCC---CCCC----------------
Confidence 00 0001110 0001234555 5444
Q ss_pred CccCCCccccCCCCcccCceeEEEEeCHHHHHHcCC-cceEEEEEEEEeecCCCcccc--chHHHHHHHHHHcCCCCCCC
Q 015003 246 SFKEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAAQAPEWFTT--APSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 246 ~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~-~~~~~i~g~~~~~~~~~~~~~--~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++. +++++|.|++...+....... +..++++++|+++|++++||
T Consensus 230 ---~~G~~-------~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dI 299 (415)
T 1tqy_B 230 ---AAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDV 299 (415)
T ss_dssp ---CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGC
T ss_pred ---CCCcc-------eeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHC
Confidence 45555 899999999999999999999 999999999998774332111 67899999999999999999
Q ss_pred ceeeccccchh----HHHHHHHH-cCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc-----------------
Q 015003 323 DYYEINEAFSV----VAIANQKL-LGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK----------------- 380 (414)
Q Consensus 323 d~~~~hd~~~~----~~~~~~e~-lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------- 380 (414)
|+++.|.+++. .+...++. +|-. ++.++..|..+||+.||+|+.++++++++|+.+
T Consensus 300 d~ve~Hgtgt~~~D~~E~~al~~~~g~~--~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~ 377 (415)
T 1tqy_B 300 DVVFADGAGVPELDAAEARAIGRVFGRE--GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGI 377 (415)
T ss_dssp CEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCC
T ss_pred CEEEEeCCCCcCcCHHHHHHHHHHhCCC--CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence 99999999984 34433333 4432 366667788899999999999999999999974
Q ss_pred ----------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 ----------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 ----------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
..++.+..+++.||+++++||+..+.
T Consensus 378 ~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~~ 413 (415)
T 1tqy_B 378 DLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFAP 413 (415)
T ss_dssp EECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC--
T ss_pred cccCCCCccCCCCEEEEecCcCCCeEEEEEEecCCC
Confidence 23567888899999999999998654
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=262.55 Aligned_cols=266 Identities=22% Similarity=0.266 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-----------------C---------CcHHHHHHHHCCCC
Q 015003 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANL-----------------G---------QAPARQAALGAGIP 87 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~-----------------~---------~~~a~~va~~lgl~ 87 (414)
.+|+.+|+++||+|||+ +++|. |++|+..+++. . ...+..|+..||++
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 161 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGAR 161 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccC
Confidence 36999999999999998 45553 88887765431 1 13678899999994
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 162 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~~~~----------------------------- 209 (416)
T 2wge_A 162 --AGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE-ALPIAA----------------------------- 209 (416)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC-HHHHHH-----------------------------
T ss_pred --CCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc-hHHHHH-----------------------------
Confidence 799999999999999999999999999999999999999876 321110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+. ..+.+... ...++..++| |+++
T Consensus 210 ---------------------~~-----------~~~~l~~~---~~~~~~~~~p---fd~~------------------ 233 (416)
T 2wge_A 210 ---------------------FS-----------MMRAMSTR---NDEPERASRP---FDKD------------------ 233 (416)
T ss_dssp ---------------------HH-----------TTTCBCCC---TTSGGGSCCT---TBTT------------------
T ss_pred ---------------------HH-----------hcchhhcc---ccCCcccccc---cccC------------------
Confidence 00 00000000 0011334555 4443
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++||++++||++.+.+++++.+++++|.|++...+.. ......+.++++++|+++|++++||
T Consensus 234 -~dg~v-------~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 305 (416)
T 2wge_A 234 -RDGFV-------FGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADI 305 (416)
T ss_dssp -CCCBC-------BBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCcc-------ccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHC
Confidence 34444 8999999999999999999999999999999887642 2233466789999999999999999
Q ss_pred ceeeccccchhH----HHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------------
Q 015003 323 DYYEINEAFSVV----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------------- 381 (414)
|++++|++++.. +...++.+|. .++++++.+..+|||.||+|+.+++++++||+++.
T Consensus 306 d~ve~HgtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~ 383 (416)
T 2wge_A 306 DHVNAHGTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLD 383 (416)
T ss_dssp CEEECCCCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCE
T ss_pred CEEEECCCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 999999999875 5555566643 36888889999999999999999999999999751
Q ss_pred ----------CCeeEEeecccccceeeEEEEE
Q 015003 382 ----------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 ----------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+..+++.||+++++||+.
T Consensus 384 ~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 384 VVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp ECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 2456788899999999999985
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-30 Score=257.70 Aligned_cols=269 Identities=23% Similarity=0.281 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---ccccCeEEEEeecCCCC--------------------------CCcHHHHHHHHCCCC
Q 015003 37 ATKLGSIAIECALKRANVK---PLLVQEVFFGNVLSANL--------------------------GQAPARQAALGAGIP 87 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~---~~~Id~vi~g~~~~~~~--------------------------~~~~a~~va~~lgl~ 87 (414)
..+|+.+|+++||+|||++ +++| .+++|+..+++. ....+..|+..||++
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~ 177 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK 177 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC
Confidence 3579999999999999983 3344 478887665430 113678999999995
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 178 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~----------------------------- 225 (434)
T 2gp6_A 178 --AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIE-AVPIAG----------------------------- 225 (434)
T ss_dssp --SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCC-HHHHHH-----------------------------
T ss_pred --CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------
Confidence 799999999999999999999999999999999999999876 321110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+ ++.++ .+.++ ...++..|+| |+.+
T Consensus 226 ---------------------~---~~~~~-------~ls~~---~~~p~~~~~p---fd~~------------------ 250 (434)
T 2gp6_A 226 ---------------------F---AQMRI-------VMSTN---NDDPAGACRP---FDRD------------------ 250 (434)
T ss_dssp ---------------------H---HTTTS-------SCCCC---TTCTTTSCCS---SBTT------------------
T ss_pred ---------------------H---HHHHH-------HhcCC---CCCCCCceec---cccc------------------
Confidence 0 00000 00000 0012345666 5544
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++||
T Consensus 251 -~~g~v-------~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 322 (434)
T 2gp6_A 251 -RDGFV-------FGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDI 322 (434)
T ss_dssp -CCCCC-------BBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTE
T ss_pred -CCCcc-------eecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHc
Confidence 44554 89999999999999998889899999999998876432 223356789999999999999999
Q ss_pred ceeeccccchhH-HHHH----HHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------
Q 015003 323 DYYEINEAFSVV-AIAN----QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~-~~~~----~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------- 381 (414)
|++++|...+.. .... .+.+| .+++|++++|..+|||.||+|+.+++++++||+++.
T Consensus 323 d~ve~Hgtgt~~~D~~E~~al~~~fg--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 400 (434)
T 2gp6_A 323 DHVNAHATGTQVGDLAEGRAINNALG--GNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDL 400 (434)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHT--TCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCC
T ss_pred CEEEEeCCcCccchHHHHHHHHHHhc--cCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 999999655532 1222 22333 337999999999999999999999999999999762
Q ss_pred -----------CCeeEEeecccccceeeEEEEE
Q 015003 382 -----------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 -----------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+..+++.||+++++||+.
T Consensus 401 ~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 401 DVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp EECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 2467788899999999999985
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=263.08 Aligned_cols=273 Identities=21% Similarity=0.259 Sum_probs=208.1
Q ss_pred CHHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCCC-----------------C---------CCcHHHHHHHHC
Q 015003 36 SATKLGSIAIECALKRANV-KPLLVQ----EVFFGNVLSAN-----------------L---------GQAPARQAALGA 84 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi-~~~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~va~~l 84 (414)
...+|+.+|+++||+|||+ ++++|| .+++|+..+.. . ....+..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 4568999999999999999 998888 58888765431 0 124678999999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccccc
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYN 164 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (414)
|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 167 gl~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~~~-------------------------- 217 (431)
T 2ix4_A 167 GFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID-ALSVAG-------------------------- 217 (431)
T ss_dssp TCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHHHH--------------------------
T ss_pred CCC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH--------------------------
Confidence 995 699999999999999999999999999999999999999876 321110
Q ss_pred CCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCC
Q 015003 165 DFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLR 244 (414)
Q Consensus 165 ~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 244 (414)
+.+. +.+..++ ...++..++| |+.+
T Consensus 218 -----------~~~~------------------------~~ls~~~--~~~~~~~~~p---fd~~--------------- 242 (431)
T 2ix4_A 218 -----------FSRS------------------------RALSTKF--NSSPQEASRP---FDCD--------------- 242 (431)
T ss_dssp -----------HHHT------------------------TCBCCTT--TTCGGGSCCT---TBTT---------------
T ss_pred -----------HHhc------------------------cccCccc--cCCccccccc---CCCC---------------
Confidence 0000 0000000 0001234455 4433
Q ss_pred CCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-----CccccchHHHHHHHHHHcCCCC
Q 015003 245 PSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-----EWFTTAPSLAIPKAIANAGLEA 319 (414)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~aGl~~ 319 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+.. ........++++++|+++|+++
T Consensus 243 ----~~g~~-------~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~ 311 (431)
T 2ix4_A 243 ----RDGFV-------IGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCP 311 (431)
T ss_dssp ----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred ----CCCce-------eecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCH
Confidence 44444 8999999999999999999999999999999887642 2233456789999999999999
Q ss_pred CCCceeeccccchhH----HH-HHHHHcCCC--CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC-----------
Q 015003 320 SQIDYYEINEAFSVV----AI-ANQKLLGLD--PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK----------- 381 (414)
Q Consensus 320 ~DId~~~~hd~~~~~----~~-~~~e~lGl~--~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~----------- 381 (414)
+|||++++|.+++.. +. .+.+.++.. ..++++++++..+||+.|++|+..++++++||+++.
T Consensus 312 ~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~ 391 (431)
T 2ix4_A 312 NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPD 391 (431)
T ss_dssp GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBC
T ss_pred HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCC
Confidence 999999999988752 22 223334432 146788888999999999999999999999999752
Q ss_pred -----------------CCeeEEeecccccceeeEEEEE
Q 015003 382 -----------------GKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 382 -----------------~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.++.+.++++.||+++.+||+.
T Consensus 392 p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 392 PIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp TTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 2467788899999999999985
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=256.21 Aligned_cols=268 Identities=24% Similarity=0.316 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCCCC
Q 015003 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGIP 87 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl~ 87 (414)
.+|+.+|+++||+|||+++++|| .+++|+..++. .....+..|+..+|++
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 173 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN 173 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC
Confidence 37999999999999999999999 58888765431 0113678899999995
Q ss_pred CCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCc
Q 015003 88 NSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFG 167 (414)
Q Consensus 88 ~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
+|+++++++|+|++.||..|+++|++|++|+|||+|+|.+.. |.....
T Consensus 174 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~~~----------------------------- 221 (430)
T 1ox0_A 174 --GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFAIAG----------------------------- 221 (430)
T ss_dssp --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHHHH-----------------------------
T ss_pred --CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------
Confidence 699999999999999999999999999999999999998765 322110
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCc
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSF 247 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (414)
+.. .+.+.. ...++..|+| |+++
T Consensus 222 --------~~~------------------------~~~ls~----~~~p~~~~~p---Fd~~------------------ 244 (430)
T 1ox0_A 222 --------FQA------------------------LTALST----TEDPTRASIP---FDKD------------------ 244 (430)
T ss_dssp --------HHH------------------------TTCBCC----CSSTTSSSCT---TBTT------------------
T ss_pred --------HHh------------------------CCCccC----CCCCCCCCCC---CCCC------------------
Confidence 000 001110 0112345566 5544
Q ss_pred cCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCC
Q 015003 248 KEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 248 ~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DI 322 (414)
++|.+ ++|||+++||++.+.+++++.+++++|.|++...+... .......++++++|+++|++++||
T Consensus 245 -~~g~~-------~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dI 316 (430)
T 1ox0_A 245 -RNGFV-------MGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQV 316 (430)
T ss_dssp -CCSBC-------BCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred -CCCcc-------ccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHc
Confidence 45555 89999999999999999999999999999998876422 223456789999999999999999
Q ss_pred ceeeccccchhHHH-----HHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------
Q 015003 323 DYYEINEAFSVVAI-----ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------- 381 (414)
Q Consensus 323 d~~~~hd~~~~~~~-----~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------- 381 (414)
|+|++|++++...- .+.+.+|- ++.++..|..+||+.||+|+..+++++++|+++.
T Consensus 317 d~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~ 393 (430)
T 1ox0_A 317 AYVNAHGTSTPANEKGESGAIVAVLGK---EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEA 393 (430)
T ss_dssp CCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCS
T ss_pred CEEEEeCCcCcccCHHHHHHHHHHhCC---CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCc
Confidence 99999999997531 23344553 3334444666899999999999999999999752
Q ss_pred -----------CCeeEEeecccccceeeEEEEEec
Q 015003 382 -----------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 -----------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+..+++.||+++++||+...
T Consensus 394 ~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 394 NVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EECBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred ccCCCCCcCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 346778889999999999998743
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=254.56 Aligned_cols=269 Identities=20% Similarity=0.246 Sum_probs=207.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe-----EEEEeecCCC-------------C--------------CCcHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE-----VFFGNVLSAN-------------L--------------GQAPARQAALG 83 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~-----vi~g~~~~~~-------------~--------------~~~~a~~va~~ 83 (414)
...+|+.+|+++||+|||+++++||. |++|+..+.+ . ....+.+++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35679999999999999999999986 9999876542 1 13467889999
Q ss_pred CCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccc
Q 015003 84 AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVY 163 (414)
Q Consensus 84 lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (414)
+|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. |....
T Consensus 150 lgl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~~~-------------------------- 200 (406)
T 2vba_A 150 FKIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW-EMACE-------------------------- 200 (406)
T ss_dssp TTCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH-HHHHH--------------------------
T ss_pred ccCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-hHHHH--------------------------
Confidence 9995 799999999999999999999999999999999999999865 21110
Q ss_pred cCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcC
Q 015003 164 NDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKL 243 (414)
Q Consensus 164 ~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 243 (414)
+.+.| .+..+. ...++..|+| |+++
T Consensus 201 ------------~~~~~------------------------~ls~~~--~~~p~~~~~p---fd~~-------------- 225 (406)
T 2vba_A 201 ------------FDAMG------------------------ALSTKY--NDTPEKASRT---YDAH-------------- 225 (406)
T ss_dssp ------------HHHTT------------------------CBCCSC--TTSGGGSCCT---TBTT--------------
T ss_pred ------------Hhhcc------------------------cccccc--CCCCccccCc---CcCC--------------
Confidence 00111 111000 0002345677 6665
Q ss_pred CCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc---cccchHHHHHHHHHHcCCCCC
Q 015003 244 RPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 244 ~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~aGl~~~ 320 (414)
++|++ ++|||+++||++.+.+++++.+++++|.|++...+.... ...+..++++++|+++| +
T Consensus 226 -----~~G~v-------~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~ 290 (406)
T 2vba_A 226 -----RDGFV-------IAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---T 290 (406)
T ss_dssp -----CCSBC-------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---S
T ss_pred -----CCceE-------eeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---C
Confidence 56666 799999999999999999999999999999998874321 13456789999999999 9
Q ss_pred CCceeeccccchhH----H-HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------
Q 015003 321 QIDYYEINEAFSVV----A-IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------- 381 (414)
Q Consensus 321 DId~~~~hd~~~~~----~-~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------- 381 (414)
|||+++.|++++.. + ..+.+.||... +++++.|..+||+.+|+|+..+++++++|+++.
T Consensus 291 dId~ve~HgtgT~~gD~~E~~al~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~ 368 (406)
T 2vba_A 291 PIDYLNSHGTSTPVGDVKELAAIREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA 368 (406)
T ss_dssp CCCEEECCCCSCHHHHHHHHHHHHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTC
T ss_pred CccEEEeeCccCcccCHHHHHHHHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCc
Confidence 99999999999874 2 22334455432 556666777999999999999999999999752
Q ss_pred -------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 -------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 -------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.+..+++.||+++.+||+..+
T Consensus 369 ~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 369 AGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLK 405 (406)
T ss_dssp TTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC-
T ss_pred cccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeCC
Confidence 245678889999999999998753
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-30 Score=246.73 Aligned_cols=258 Identities=16% Similarity=0.123 Sum_probs=204.7
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+++...++.+..+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..+|+++ +++++++++|+|
T Consensus 36 ~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas 114 (313)
T 1zow_A 36 MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGK-VASMDQLAACSG 114 (313)
T ss_dssp HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCS-CCEEEEECGGGH
T ss_pred hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CcEEEECCcCHH
Confidence 5677766666678899999999999999999999999999999998877767788999999999974 899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|+.+|++|++++|||+|+|.++.. ..
T Consensus 115 ~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-~~---------------------------------------------- 147 (313)
T 1zow_A 115 FMYSMITAKQYVQSGDYHNILVVGADKLSKI-TD---------------------------------------------- 147 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-CC----------------------------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEcccccc-cC----------------------------------------------
Confidence 9999999999999999999999999987651 00
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
| +++ . ++..+
T Consensus 148 ------------------------------~-------------~d~--------------------~-------~~~~~ 157 (313)
T 1zow_A 148 ------------------------------L-------------TDR--------------------S-------TAVLF 157 (313)
T ss_dssp ------------------------------T-------------TCH--------------------H-------HHTTB
T ss_pred ------------------------------c-------------ccc--------------------c-------ceeee
Confidence 0 000 0 12237
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEE-EEEEEEeecC---CC-----cc-c--------cchHHHHHHHHHHcCCCCCCCc
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAK-IRGFADAAQA---PE-----WF-T--------TAPSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~-i~g~~~~~~~---~~-----~~-~--------~~~~~a~~~al~~aGl~~~DId 323 (414)
+|||+|+||++.+. +.+++.. +.+.+...+. +. .+ + ....++++++|+++|++++|||
T Consensus 158 gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did 233 (313)
T 1zow_A 158 GDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDID 233 (313)
T ss_dssp CEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCS
T ss_pred ccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999987642 1222221 2221111100 10 00 0 1345789999999999999999
Q ss_pred eeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 324 YYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+|++|++++.....+.+.||++++++..+ +..+||+.++++...+.+++++-+.+++++.+...+++|.++.+++|+.
T Consensus 234 ~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 234 LFIPHQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred EEEEcCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999999888999999998877643 7789999999999999998887666678889998899999999999986
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-29 Score=242.41 Aligned_cols=253 Identities=22% Similarity=0.192 Sum_probs=203.1
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+++...++.+..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++++|+|
T Consensus 50 rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s 129 (333)
T 4dfe_A 50 RTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSG 129 (333)
T ss_dssp HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGH
T ss_pred hcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHH
Confidence 35666665556678999999999999999999999999999999998877778899999999999667999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|..+|++|.+++|||+|+|.++. +.
T Consensus 130 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~----------------------------------------------- 161 (333)
T 4dfe_A 130 FAYAVATADSFIRSGQHRTALVIGAETFSR-IL----------------------------------------------- 161 (333)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GC-----------------------------------------------
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeecccc-cc-----------------------------------------------
Confidence 999999999999999999999999999876 10
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
+.++ + ..+..+
T Consensus 162 ---------------------------------------------~~~d------------------~------~~~~lf 172 (333)
T 4dfe_A 162 ---------------------------------------------DFKD------------------R------TTCVLF 172 (333)
T ss_dssp ---------------------------------------------CTTC------------------T------TTTTTB
T ss_pred ---------------------------------------------Cccc------------------c------cceeee
Confidence 0000 0 023448
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C-----------Cccc-----------cchHHHHHHH
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P-----------EWFT-----------TAPSLAIPKA 311 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~-----------~~~~-----------~~~~~a~~~a 311 (414)
+|||+|+||+..+. ..+ .+....++. + ..+. ....++++++
T Consensus 173 GDGA~A~vl~~~~~-----~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 243 (333)
T 4dfe_A 173 GDGAGAVILQASDE-----PGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEA 243 (333)
T ss_dssp CEEEEEEEEEEESS-----CSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEEEEcCC-----CCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHH
Confidence 99999999997541 111 111111110 0 0000 1224788999
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecc
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICN 391 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~ 391 (414)
|+++|++++|||+|.+|+.+......+.+.||++++++..+ +..+||+..+|-.+.+.+++++-+.+.|++.+...++
T Consensus 244 l~~~gl~~~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G 321 (333)
T 4dfe_A 244 LEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVG 321 (333)
T ss_dssp HHHTTCCGGGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEE
T ss_pred HHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEc
Confidence 99999999999999999999999999999999999988765 6678999999988888888776555678888888888
Q ss_pred cccceeeEEEE
Q 015003 392 GGGGASALVLE 402 (414)
Q Consensus 392 ~gg~~~a~vl~ 402 (414)
.|-++.+++|+
T Consensus 322 ~G~t~~~~ll~ 332 (333)
T 4dfe_A 322 GGFTWGASVIR 332 (333)
T ss_dssp TTTEEEEEEEE
T ss_pred hhheeEEEEEE
Confidence 88899999987
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-29 Score=238.69 Aligned_cols=240 Identities=19% Similarity=0.168 Sum_probs=194.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
.+..+|+.+|+++||+++|+++++||.+++++..+++..++.+..++..||++. .++++++++|+|++.||..|+.+|+
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDISAACSGFIYALDIADSFIK 126 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecCccchHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999998877767789999999999974 7999999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|++++|||+|+|.++..
T Consensus 127 ~g~~~~vlv~g~e~~s~~-------------------------------------------------------------- 144 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLSEA-------------------------------------------------------------- 144 (309)
T ss_dssp TTSCSEEEEEEEEEGGGT--------------------------------------------------------------
T ss_pred CCCCCEEEEEEecccccc--------------------------------------------------------------
Confidence 999999999999987641
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++++ ...++..++|||+|+||++.+
T Consensus 145 -------------------------------~~~~------------------------~~~~~~~~gdGaaA~vL~~~~ 169 (309)
T 2ebd_A 145 -------------------------------VDWE------------------------DRSTCVLFGDGAGAVVVTRSE 169 (309)
T ss_dssp -------------------------------CCTT------------------------CTTTTTTBCEEEEEEEEEECS
T ss_pred -------------------------------cCcc------------------------chhhccccccccEEEEEEecC
Confidence 0000 001233489999999999765
Q ss_pred HHHHcCCcceEEEEEEEEeecC--------CC----c-ccc--------chHHHHHHHHHHcCCCCCCCceeeccccchh
Q 015003 275 KALELGLQVIAKIRGFADAAQA--------PE----W-FTT--------APSLAIPKAIANAGLEASQIDYYEINEAFSV 333 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~--------~~----~-~~~--------~~~~a~~~al~~aGl~~~DId~~~~hd~~~~ 333 (414)
.+ .. |.+....++. +. . .+. ...++++++|+++|++++|||++++|++++.
T Consensus 170 ~~----~~----i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~ 241 (309)
T 2ebd_A 170 DK----SD----ILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVR 241 (309)
T ss_dssp SS----CE----EEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH
T ss_pred CC----Cc----eeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence 32 11 2222222221 10 0 010 3467999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 334 VAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 334 ~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
....+.+.||++++++..+ +..+||+.+++++..+.+++++-+.+++++.+...++.|.++.+++|+
T Consensus 242 ~~~~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 242 IINALAEKLNIPKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp HHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHhCCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEE
Confidence 8888899999998877543 778999999999999999988755567888888888888899999887
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=265.03 Aligned_cols=268 Identities=21% Similarity=0.267 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCCC------------------CcHHHHHHHHCCCCCCcceee
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG------------------QAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~~------------------~~~a~~va~~lgl~~~~~~~~ 94 (414)
..+|+.+++++||+|||+++++||. |++|+..+++.. ...+..|+..+|++ +|+++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE--GPSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC--SCEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC--CCEEE
Confidence 4579999999999999999999995 888887665421 13677899999995 69999
Q ss_pred EccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHH
Q 015003 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (414)
Q Consensus 95 v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (414)
++++|+|++.||..|+++|++|++|++||+|+|.++. |.....
T Consensus 173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~-p~~~~~------------------------------------ 215 (915)
T 2qo3_A 173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT-PGVFVD------------------------------------ 215 (915)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS-THHHHH------------------------------------
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC-HHHHHH------------------------------------
Confidence 9999999999999999999999999999999999876 422110
Q ss_pred HHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccc
Q 015003 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 175 ~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (414)
+ ...+.+. ++..|+| |+.+ .+|++
T Consensus 216 --------------~-----------~~~~~ls--------~~g~~~~---Fd~~-------------------adG~v- 239 (915)
T 2qo3_A 216 --------------F-----------SRQRALA--------ADGRSKA---FGAG-------------------ADGFG- 239 (915)
T ss_dssp --------------H-----------HTTTCBC--------SSCCCCT---TBTT-------------------CCCBC-
T ss_pred --------------H-----------hhhcccC--------CCCCccc---ccCC-------------------CCcee-
Confidence 0 0001111 2445666 6555 55666
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCc-----cccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
++||++++||++.+.+++.+.++++.|.|++...+.... ...+..++++++|+++|++++|||+|++|+
T Consensus 240 ------~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~Hg 313 (915)
T 2qo3_A 240 ------FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHG 313 (915)
T ss_dssp ------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCC
T ss_pred ------ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecC
Confidence 899999999999999999999999999999988864322 123457899999999999999999999998
Q ss_pred cchhH-----HHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------------
Q 015003 330 AFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------------- 381 (414)
Q Consensus 330 ~~~~~-----~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------------- 381 (414)
+++.. ...+.+.+|.. ..+++++++|.++||+.+++|+..+++++++|+++.
T Consensus 314 tgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~ 393 (915)
T 2qo3_A 314 TGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGG 393 (915)
T ss_dssp CCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSS
T ss_pred CCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCc
Confidence 87643 23345667764 247999999999999999999999999999998741
Q ss_pred ---------------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ---------------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ---------------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++.++.+++.||+++.+|||...
T Consensus 394 ~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 394 VALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp EEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred eeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 245678889999999999999764
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-29 Score=242.70 Aligned_cols=258 Identities=20% Similarity=0.119 Sum_probs=201.4
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+++...++.+..+|+.+|+++||+++|+++++||.+++++..++...+..+..++..+|+ ++++++++++|+|+
T Consensus 36 ~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~ 113 (322)
T 1ub7_A 36 TGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPGW 113 (322)
T ss_dssp TCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHH
T ss_pred cCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHH
Confidence 4454444344568999999999999999999999999999999888766567789999999999 48999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|+.+|++|++++|||+|+|.++... .
T Consensus 114 ~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~--~---------------------------------------------- 145 (322)
T 1ub7_A 114 IYALAQAHALVEAGLAQKVLAVGAEALSKII--D---------------------------------------------- 145 (322)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGTS--C----------------------------------------------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEechhcccc--C----------------------------------------------
Confidence 9999999999999999999999999876410 0
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
| +++ .++.+ ++
T Consensus 146 -----------------------------~-------------~d~--------------------~~~~~-------~G 156 (322)
T 1ub7_A 146 -----------------------------W-------------NDR--------------------ATAVL-------FG 156 (322)
T ss_dssp -----------------------------T-------------TCH--------------------HHHTT-------BC
T ss_pred -----------------------------h-------------hhc--------------------cccee-------ec
Confidence 0 000 11122 79
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEE-EEEEEeecC----------CCc---------cc--------cchHHHHHHHHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKI-RGFADAAQA----------PEW---------FT--------TAPSLAIPKAIAN 314 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i-~g~~~~~~~----------~~~---------~~--------~~~~~a~~~al~~ 314 (414)
|||+|+||++.+. +.+++... .+.+...+. |.. .+ ....++++++|++
T Consensus 157 dGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ 232 (322)
T 1ub7_A 157 DGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEK 232 (322)
T ss_dssp CEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997642 22233222 111110000 111 00 2346789999999
Q ss_pred cCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccccc
Q 015003 315 AGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGG 394 (414)
Q Consensus 315 aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg 394 (414)
+|++++|||++++|+.++.....+.+.||++++++.. .+..+||+.++++...+.+++++-+.+.+++.+...++.|+
T Consensus 233 agl~~~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~--~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~ 310 (322)
T 1ub7_A 233 AGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAV--NVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGL 310 (322)
T ss_dssp HTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTT
T ss_pred cCCCHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHH--HHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhh
Confidence 9999999999999999999888889999999887754 37789999999999999888877666678899999999999
Q ss_pred ceeeEEEEEec
Q 015003 395 GASALVLELMQ 405 (414)
Q Consensus 395 ~~~a~vl~~~~ 405 (414)
++.+++|+..+
T Consensus 311 ~~~~~vl~~~~ 321 (322)
T 1ub7_A 311 TWAAAVLTWGG 321 (322)
T ss_dssp EEEEEEEECCC
T ss_pred eeEEEEEEeCC
Confidence 99999998743
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=263.60 Aligned_cols=268 Identities=25% Similarity=0.294 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCCC-------------------CcHHHHHHHHCCCCCCcceee
Q 015003 38 TKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANLG-------------------QAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~~-------------------~~~a~~va~~lgl~~~~~~~~ 94 (414)
..|+.+++++||+|||+++++||. |++|+...++.. ...+..++..+|++ +|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE--GPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC--CCeEe
Confidence 358999999999999999999995 888887765421 13567899999995 69999
Q ss_pred EccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHH
Q 015003 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (414)
Q Consensus 95 v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (414)
++++|+|++.||++|+++|++|++|++||+|+|.++. |.....-
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~-p~~~~~~----------------------------------- 238 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSS-PGAFTEF----------------------------------- 238 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-THHHHHH-----------------------------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccC-hhhhHhh-----------------------------------
Confidence 9999999999999999999999999999999999887 3221100
Q ss_pred HHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccc
Q 015003 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 175 ~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (414)
...+.+. ++..|+| |+.+ .+|++
T Consensus 239 --------------------------~~~~~ls--------~~g~~~p---Fd~~-------------------adG~~- 261 (917)
T 2hg4_A 239 --------------------------RSQGGLA--------ADGRCKP---FSKA-------------------ADGFG- 261 (917)
T ss_dssp --------------------------TTSSCBC--------TTSCCCT---TBTT-------------------CCCBC-
T ss_pred --------------------------hhccCcC--------CccccCc---cccc-------------------ccCCC-
Confidence 0001111 1345666 5444 44555
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc-----ccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF-----TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~-----~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
++||++++||++.+.+++.+.++++.|.|++...+..... ..+..++++++|+++|++++|||++++|+
T Consensus 262 ------~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHg 335 (917)
T 2hg4_A 262 ------LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHG 335 (917)
T ss_dssp ------BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred ------CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeecc
Confidence 8999999999999999999999999999999988754322 22446899999999999999999999999
Q ss_pred cchhH-----HHHHHHHcCCC---CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC--------------------
Q 015003 330 AFSVV-----AIANQKLLGLD---PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK-------------------- 381 (414)
Q Consensus 330 ~~~~~-----~~~~~e~lGl~---~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~-------------------- 381 (414)
+++.. ...+.+.+|.. ..+++++++|.++||+.+++|+..+++++++|+++.
T Consensus 336 tgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~ 415 (917)
T 2hg4_A 336 TGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGA 415 (917)
T ss_dssp CCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---C
T ss_pred CCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccc
Confidence 99963 22233445643 247899999999999999999999999999998641
Q ss_pred ---------------CCeeEEeecccccceeeEEEEEecc
Q 015003 382 ---------------GKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 382 ---------------~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.++.++.+++.||+++.+|||....
T Consensus 416 ~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 455 (917)
T 2hg4_A 416 VSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPE 455 (917)
T ss_dssp CEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred eeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCCc
Confidence 2456788899999999999997543
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-28 Score=234.25 Aligned_cols=252 Identities=16% Similarity=0.137 Sum_probs=203.3
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
+|++.+++...++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||++ ++++++++.+|+|
T Consensus 43 ~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s 121 (323)
T 3il3_A 43 RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTG 121 (323)
T ss_dssp HTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGH
T ss_pred hcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHH
Confidence 567777766667899999999999999999999999999999999988777788999999999997 6899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTI 181 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~ 181 (414)
++.||..|..+|++|.+++|||+++|.++.. ..+
T Consensus 122 ~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-~~~--------------------------------------------- 155 (323)
T 3il3_A 122 FVYALSVADQFIRAGKVKKALVIGSDLNSRK-LDE--------------------------------------------- 155 (323)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-CCT---------------------------------------------
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEeeccccc-cCc---------------------------------------------
Confidence 9999999999999999999999999998761 000
Q ss_pred CHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcc
Q 015003 182 TRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASII 261 (414)
Q Consensus 182 t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 261 (414)
.| + ..+..+
T Consensus 156 ----------------------------------------------~d-------------------~------~~~~lf 164 (323)
T 3il3_A 156 ----------------------------------------------TD-------------------R------STVVLF 164 (323)
T ss_dssp ----------------------------------------------TC-------------------T------TTTTTB
T ss_pred ----------------------------------------------cc-------------------c------cccccc
Confidence 00 1 023448
Q ss_pred cCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C---------Cccc-c----------chHHHHHHHHH
Q 015003 262 SDGAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P---------EWFT-T----------APSLAIPKAIA 313 (414)
Q Consensus 262 ~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~---------~~~~-~----------~~~~a~~~al~ 313 (414)
||||+|+||+..+ . .. +.+....++. + ..+. . ...++++++|+
T Consensus 165 GDGA~A~vl~~~~---~--~~----i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~ 235 (323)
T 3il3_A 165 GDGAGAVILEASE---Q--EG----IISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLL 235 (323)
T ss_dssp CEEEEEEEEEEES---S--CC----EEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEEEcC---C--CC----eEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999754 1 11 1111111110 0 0000 0 12467889999
Q ss_pred HcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccc
Q 015003 314 NAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG 393 (414)
Q Consensus 314 ~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~g 393 (414)
++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.++|++.+...++.|
T Consensus 236 ~~gl~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G 313 (323)
T 3il3_A 236 ANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGG 313 (323)
T ss_dssp TTTCCTTTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETT
T ss_pred HcCCCHHHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehh
Confidence 999999999999999999999999999999999988765 567899999998888888877656667888888888888
Q ss_pred cceeeEEEE
Q 015003 394 GGASALVLE 402 (414)
Q Consensus 394 g~~~a~vl~ 402 (414)
.++.+++|+
T Consensus 314 ~t~~~~~l~ 322 (323)
T 3il3_A 314 WTWGSALVR 322 (323)
T ss_dssp TEEEEEEEE
T ss_pred heeEEEEEE
Confidence 899999987
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=240.26 Aligned_cols=249 Identities=22% Similarity=0.167 Sum_probs=195.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHH
Q 015003 30 GSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLA 109 (414)
Q Consensus 30 ~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A 109 (414)
...++.+..+|+.+|+++||+++|+++++||.+++++..+++..+..+..++..||++ ++++++++++|+|++.||..|
T Consensus 54 ~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A 132 (335)
T 1u6e_A 54 FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAA 132 (335)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHH
Confidence 3445789999999999999999999999999999999888777788999999999996 589999999999999999999
Q ss_pred HHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHH
Q 015003 110 AQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSY 189 (414)
Q Consensus 110 ~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~ 189 (414)
+.+|++|.+++|||+|+|.++..
T Consensus 133 ~~~i~~g~~~~vLv~g~e~~s~~--------------------------------------------------------- 155 (335)
T 1u6e_A 133 ADMIRGGGAATMLVVGTEKLSPT--------------------------------------------------------- 155 (335)
T ss_dssp HHHHHHTSCSSEEEEEEEECGGG---------------------------------------------------------
T ss_pred HHHHHcCCCCEEEEEEEcccccc---------------------------------------------------------
Confidence 99999999999999999998641
Q ss_pred HHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEE
Q 015003 190 AIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALV 269 (414)
Q Consensus 190 a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~v 269 (414)
++++ ...++..++|||+|+|
T Consensus 156 ------------------------------------~~~~------------------------d~~~~~~~gDGA~A~v 175 (335)
T 1u6e_A 156 ------------------------------------IDMY------------------------DRGNCFIFADGAAAVV 175 (335)
T ss_dssp ------------------------------------CCTT------------------------CTTTTTTBCEEEEEEE
T ss_pred ------------------------------------cCcc------------------------ccccceEeccccEEEE
Confidence 0000 0013445899999999
Q ss_pred EeCHHHHHHcCCcceEEEEE-EEEeec-------------CCC----cc---c--------cchHHHHHHHHHHcCCCCC
Q 015003 270 LVSGVKALELGLQVIAKIRG-FADAAQ-------------APE----WF---T--------TAPSLAIPKAIANAGLEAS 320 (414)
Q Consensus 270 L~s~~~a~~~~~~~~~~i~g-~~~~~~-------------~~~----~~---~--------~~~~~a~~~al~~aGl~~~ 320 (414)
|++.+. .+ ++..+.+ .+...+ .+. .+ + ....++++++|+++|++++
T Consensus 176 l~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~ 250 (335)
T 1u6e_A 176 VGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPD 250 (335)
T ss_dssp EEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 987542 11 1112211 110000 000 00 0 1235789999999999999
Q ss_pred CCceeeccccchhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeE
Q 015003 321 QIDYYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (414)
Q Consensus 321 DId~~~~hd~~~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~ 399 (414)
|||++++|++++.....+.+.||++++ ++..+ +..+||+.+++....+.++..+-+.+.+++.+...+++|.++.++
T Consensus 251 dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~ 328 (335)
T 1u6e_A 251 QIDVFVPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQ 328 (335)
T ss_dssp GCCEEEECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEE
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEE
Confidence 999999999999999999999999988 66544 567899999998877777666544456788899889999999999
Q ss_pred EEEE
Q 015003 400 VLEL 403 (414)
Q Consensus 400 vl~~ 403 (414)
+|+.
T Consensus 329 vl~~ 332 (335)
T 1u6e_A 329 VVRM 332 (335)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9986
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=235.65 Aligned_cols=260 Identities=17% Similarity=0.058 Sum_probs=205.5
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+...++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++++|+++
T Consensus 52 tGI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~ 131 (354)
T 4efi_A 52 IGVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGY 131 (354)
T ss_dssp HCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHH
T ss_pred cCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHH
Confidence 44555554556789999999999999999999999999999999988777889999999999996579999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|..+|++|.+++|||+++|.++.. .
T Consensus 132 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-~------------------------------------------------ 162 (354)
T 4efi_A 132 PQALWLGMNLIQTGAAKRVLLAVGDTISKM-I------------------------------------------------ 162 (354)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGGG-C------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEechhccc-C------------------------------------------------
Confidence 999999999999999999999999998761 0
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+.+ +.. .+..+|
T Consensus 163 --------------------------------------------~~~---------------------d~~---~~~lfG 174 (354)
T 4efi_A 163 --------------------------------------------DPT---------------------DRS---TSLLFG 174 (354)
T ss_dssp --------------------------------------------CTT---------------------CHH---HHTTBC
T ss_pred --------------------------------------------Ccc---------------------ccc---cccccc
Confidence 000 000 123389
Q ss_pred CceeEEEEeCHHHHHHcCCcce-EEEEEEEEeec---------CCC--------------ccc-----------cchHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVI-AKIRGFADAAQ---------APE--------------WFT-----------TAPSLA 307 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~-~~i~g~~~~~~---------~~~--------------~~~-----------~~~~~a 307 (414)
|||+|+||+..+.. ..+ ..+...+...+ .|. .+. ....++
T Consensus 175 DGA~A~vl~~~~~~-----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 249 (354)
T 4efi_A 175 DAGTMTALETSNGD-----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKL 249 (354)
T ss_dssp CEEEEEEEEECCSC-----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHH
T ss_pred cceeEEEEeecCCC-----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHH
Confidence 99999999875421 111 11111110000 000 000 011357
Q ss_pred HHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEE
Q 015003 308 IPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVG 387 (414)
Q Consensus 308 ~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~ 387 (414)
++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.++|++.+.
T Consensus 250 i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll 327 (354)
T 4efi_A 250 VSRTLDIAGRDKDSYDAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEETLQLGM 327 (354)
T ss_dssp HHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEE
T ss_pred HHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEE
Confidence 889999999999999999999999999999999999999987764 677899999999999999988777777888888
Q ss_pred eecccccceeeEEEEEecc
Q 015003 388 GICNGGGGASALVLELMQA 406 (414)
Q Consensus 388 ~~~~~gg~~~a~vl~~~~~ 406 (414)
..++.|.++.+++|+..+-
T Consensus 328 ~~fG~G~t~~~~ll~~~~~ 346 (354)
T 4efi_A 328 FGFGVGYSWASAALAVGPL 346 (354)
T ss_dssp EEEETTTEEEEEEEEECCC
T ss_pred EEEchhhhheeeEEEECCc
Confidence 8899999999999998654
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-28 Score=234.67 Aligned_cols=255 Identities=17% Similarity=0.132 Sum_probs=199.9
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
+++.+++-..++.+..+|+.+|+++||+++|+++++||.+++|+..+++..+..+.+++..+|+++ +|+++++++|+|+
T Consensus 37 ~Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~~aCas~ 115 (317)
T 1hnj_A 37 TGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG-CPAFDVAAACAGF 115 (317)
T ss_dssp HCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS-SCEEEECCGGGHH
T ss_pred hCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-CeEEeeCcccHHH
Confidence 334344333456899999999999999999999999999999998887767789999999999974 8999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|+.+|++|.+++|||+|+|.++. ..
T Consensus 116 ~~al~~A~~~i~~g~~~~vlv~g~e~~s~-~~------------------------------------------------ 146 (317)
T 1hnj_A 116 TYALSVADQYVKSGAVKYALVVGSDVLAR-TC------------------------------------------------ 146 (317)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECHHH-HS------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEechhcc-cC------------------------------------------------
Confidence 99999999999999999999999998654 00
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
++++ . .+|.+ ++
T Consensus 147 --------------------------------------------~~~d------~-----------~~~~~-------~G 158 (317)
T 1hnj_A 147 --------------------------------------------DPTD------R-----------GTIII-------FG 158 (317)
T ss_dssp --------------------------------------------CTTC------H-----------HHHTT-------BC
T ss_pred --------------------------------------------Cchh------c-----------cccee-------ec
Confidence 0000 0 01123 79
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEE-EEEeec---CCCc-------------ccc--------chHHHHHHHHHHcCC
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRG-FADAAQ---APEW-------------FTT--------APSLAIPKAIANAGL 317 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g-~~~~~~---~~~~-------------~~~--------~~~~a~~~al~~aGl 317 (414)
|||+|+||++.+. .++++.+.+ .+...+ .+.. .+. ...++++++|+++|+
T Consensus 159 dGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl 233 (317)
T 1hnj_A 159 DGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNL 233 (317)
T ss_dssp CEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999987642 234444433 111101 0110 011 335789999999999
Q ss_pred CCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeeccccccee
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGAS 397 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~ 397 (414)
+++|||+|++|+.++.....+.+.||++++++.. .+..+||+.++++...+.+++++-+.++|++.+...++.|.++.
T Consensus 234 ~~~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~--~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~ 311 (317)
T 1hnj_A 234 DRSQLDWLVPHQANLRIISATAKKLGMSMDNVVV--TLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWG 311 (317)
T ss_dssp CGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEE
T ss_pred CHHHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHh--hHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeE
Confidence 9999999999999999988899999999887753 47789999999999999888776555678888988899888999
Q ss_pred eEEEE
Q 015003 398 ALVLE 402 (414)
Q Consensus 398 a~vl~ 402 (414)
+++|+
T Consensus 312 ~~~l~ 316 (317)
T 1hnj_A 312 SALVR 316 (317)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99987
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=237.79 Aligned_cols=269 Identities=16% Similarity=0.078 Sum_probs=203.6
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHH
Q 015003 26 GGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKA 105 (414)
Q Consensus 26 ~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~a 105 (414)
.+|+-..++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++.+|+|++.|
T Consensus 57 ~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~a 136 (345)
T 3s21_A 57 HARRLWDQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFING 136 (345)
T ss_dssp SEEEECSSCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHH
T ss_pred eeEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHH
Confidence 33333446789999999999999999999999999999999888777788999999999997679999999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHH
Q 015003 106 VMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185 (414)
Q Consensus 106 l~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~ 185 (414)
|..|..+|++|.+++|||+|+|.++. .......+
T Consensus 137 l~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~~~~--------------------------------------------- 170 (345)
T 3s21_A 137 MDIAARMLERGEIDYALVVDGETANL-VYEKTLER--------------------------------------------- 170 (345)
T ss_dssp HHHHHHHHHHTSCSEEEEEEEECCHH-HHHHHHHH---------------------------------------------
T ss_pred HHHHHHHHHCCCCCEEEEEEEcccch-hhcccccc---------------------------------------------
Confidence 99999999999999999999999875 21110000
Q ss_pred HHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCce
Q 015003 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGA 265 (414)
Q Consensus 186 l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGA 265 (414)
.. .+ ...++| |+.+ ..+.+ +||||
T Consensus 171 ---------------~~----~~--------~~~~~~---f~~~-------------------~~~~~-------~GdGA 194 (345)
T 3s21_A 171 ---------------MT----SP--------DVTEEE---FRNE-------------------LAALT-------LGCGA 194 (345)
T ss_dssp ---------------HT----CT--------TCCHHH---HHHH-------------------HGGGG-------BCCEE
T ss_pred ---------------cc----CC--------ccchhh---hhhh-------------------cccee-------eccce
Confidence 00 00 000000 1100 11122 79999
Q ss_pred eEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-Cc--------cc-c----------chHHHHHHHHHHcCCCCCCCcee
Q 015003 266 AALVLVSGVKALELGLQVIAKIRGFADAAQAP-EW--------FT-T----------APSLAIPKAIANAGLEASQIDYY 325 (414)
Q Consensus 266 aA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-~~--------~~-~----------~~~~a~~~al~~aGl~~~DId~~ 325 (414)
+|+||.+.+... + . ..|.+....++.. .. +. . ...++++++|+++|++++|||+|
T Consensus 195 ~A~vl~~~~~~~--~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~ 269 (345)
T 3s21_A 195 AAMVMARSELVP--D--A-PRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQF 269 (345)
T ss_dssp EEEEEEEGGGST--T--S-CEEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEE
T ss_pred eEEEEecCCCCC--C--C-cceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 999999765311 1 1 2444444333210 00 00 0 12367889999999999999999
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.+.|++.+...++.|-++.+++|+.
T Consensus 270 v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 270 VIHQVSRPHTAAFVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp EECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred EeCCCCHHHHHHHHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEEC
Confidence 999999999999999999999987654 5678999999999999998887666778888888889998999999873
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=235.22 Aligned_cols=258 Identities=16% Similarity=0.081 Sum_probs=200.3
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+-..++++..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++++++++++.+|+|+
T Consensus 66 tGI~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~ 145 (365)
T 3gwa_A 66 TGIRERRIAAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGY 145 (365)
T ss_dssp HCCCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHH
T ss_pred cCccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHH
Confidence 34444444456789999999999999999999999999999999988777788999999999998679999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
+.||..|..+|++|.+++|||+++|.++. ....
T Consensus 146 ~~Al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~---------------------------------------------- 178 (365)
T 3gwa_A 146 VYGLSLAKGLVETGAARCVLLLTADTYSK-YLHP---------------------------------------------- 178 (365)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECGGG-GSCT----------------------------------------------
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEchhhc-cCCc----------------------------------------------
Confidence 99999999999999999999999999886 1100
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+ .. ..+..+|
T Consensus 179 ----------------------------------------------~---------------------dr---~~~~lfG 188 (365)
T 3gwa_A 179 ----------------------------------------------L---------------------DK---SVRTLFG 188 (365)
T ss_dssp ----------------------------------------------T---------------------CH---HHHTTBC
T ss_pred ----------------------------------------------c---------------------cc---ccccccc
Confidence 0 00 0122389
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEE-EEEee----------cCCC-------------------ccc-----------
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRG-FADAA----------QAPE-------------------WFT----------- 301 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g-~~~~~----------~~~~-------------------~~~----------- 301 (414)
|||+|+||+..+... . ..+....+ .+... ..+. .+.
T Consensus 189 DGAaA~vl~~~~~~~-~--~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~ 265 (365)
T 3gwa_A 189 DGASATAVIAEHGEL-E--RIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSL 265 (365)
T ss_dssp CEEEEEEEEEECSSS-C--SEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHH
T ss_pred ceeEEEEEEecCCCC-C--ceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHH
Confidence 999999998754210 0 11111111 00000 0000 000
Q ss_pred cchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC
Q 015003 302 TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK 381 (414)
Q Consensus 302 ~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~ 381 (414)
....++++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+.++|-.+.+.+++++-+.+.
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~g~~~~ 343 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRANGTLAR 343 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHcCCCCC
Confidence 011367899999999999999999999999999999999999999987754 567899999998888888877666667
Q ss_pred CCeeEEeecccccceeeEEEE
Q 015003 382 GKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 382 ~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|++.+...++.|-++.+++|+
T Consensus 344 Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 344 GMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp TCEEEEEEEETTTEEEEEEEE
T ss_pred CCEEEEEEEehhheeEEEEEE
Confidence 888888889999899999987
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=234.63 Aligned_cols=250 Identities=18% Similarity=0.088 Sum_probs=198.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHH
Q 015003 32 LSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQ 111 (414)
Q Consensus 32 ~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~ 111 (414)
.++.+..+|+.+|+++||+++|+++++||.+++|+.++++..++.+..++..||+++ +++++++++|+|++.||..|+.
T Consensus 55 ~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 55 EPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN-AGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT-CEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCC-ccEEEccccchHHHHHHHHHHH
Confidence 346799999999999999999999999999999998887767788999999999974 8999999999999999999999
Q ss_pred HHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHH
Q 015003 112 SIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAI 191 (414)
Q Consensus 112 ~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~ 191 (414)
+|++|.+++|||+|+|.++.. .
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~-~--------------------------------------------------------- 155 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDV-I--------------------------------------------------------- 155 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGG-S---------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEcccccc-c---------------------------------------------------------
Confidence 999999999999999997631 0
Q ss_pred HhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEe
Q 015003 192 RSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLV 271 (414)
Q Consensus 192 ~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~ 271 (414)
. + .++ .++.+ ++|||+|+||+
T Consensus 156 ---------------~----~-------------~d~--------------------~~~~~-------~GdGA~A~vL~ 176 (339)
T 1mzj_A 156 ---------------D----L-------------ADR--------------------SLSFL-------FGDGAGAAVVG 176 (339)
T ss_dssp ---------------C----S-------------SCT--------------------TTTTT-------BCEEEEEEEEE
T ss_pred ---------------C----c-------------ccc--------------------ccceE-------eccCceEEEEE
Confidence 0 0 000 12233 89999999998
Q ss_pred CHHHHHHcCCcceEE-EEEEEEeecC-------CCc-------------cc--------cchHHHHHHHHHHcCCCCCCC
Q 015003 272 SGVKALELGLQVIAK-IRGFADAAQA-------PEW-------------FT--------TAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 272 s~~~a~~~~~~~~~~-i~g~~~~~~~-------~~~-------------~~--------~~~~~a~~~al~~aGl~~~DI 322 (414)
+.+. .+++.. +.+.+...+. |.. .+ ....++++++|+++|++++||
T Consensus 177 ~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~di 251 (339)
T 1mzj_A 177 PSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDL 251 (339)
T ss_dssp EESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGC
T ss_pred ecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 7542 122221 1121111000 000 00 234578999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCC-CcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPE-QVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~-~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl 401 (414)
|+|++|+.++.....+.+.||++++ ++..+ +..+||+.++++...+.+++++-+.+.+++.+...++.|.++.+++|
T Consensus 252 d~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l 329 (339)
T 1mzj_A 252 VAFVPHQANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQAL 329 (339)
T ss_dssp SEEEECCSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEE
Confidence 9999999999988889999999988 76533 56799999999999988888776667788999999999999999999
Q ss_pred EEecc
Q 015003 402 ELMQA 406 (414)
Q Consensus 402 ~~~~~ 406 (414)
+..+.
T Consensus 330 ~~~~~ 334 (339)
T 1mzj_A 330 LLPDP 334 (339)
T ss_dssp ECCCC
T ss_pred EeCCC
Confidence 87543
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=232.39 Aligned_cols=257 Identities=18% Similarity=0.154 Sum_probs=200.9
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+-..++++..+|+.+|+++||+++|++|+|||.||++++++++..|..+..|+..||++ +.++|+++++|+++
T Consensus 48 tGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~ 126 (350)
T 4ewp_A 48 TGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGY 126 (350)
T ss_dssp HCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHH
T ss_pred cCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhH
Confidence 55555555567889999999999999999999999999999999999888899999999999997 47899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
++||..|..+|++|.++.|||+++|.+|..
T Consensus 127 ~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-------------------------------------------------- 156 (350)
T 4ewp_A 127 CYGVAQADALVRSGTARHVLVVGVERLSDV-------------------------------------------------- 156 (350)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEEEGGGG--------------------------------------------------
T ss_pred HHHHHHhhhhhhCCCccceeEeeeeeceec--------------------------------------------------
Confidence 999999999999999999999999998751
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
+++.. +. .+..++
T Consensus 157 -------------------------------------------~d~~~------------------~~------~~~lfg 169 (350)
T 4ewp_A 157 -------------------------------------------VDPTD------------------RS------ISFLLG 169 (350)
T ss_dssp -------------------------------------------CCTTC------------------TT------TGGGBC
T ss_pred -------------------------------------------ccccc------------------cc------cccccc
Confidence 00000 00 112279
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEEE-EEeec----------------------CCC-----------ccc-------
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRGF-ADAAQ----------------------APE-----------WFT------- 301 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g~-~~~~~----------------------~~~-----------~~~------- 301 (414)
|||+|+||...+. .+... ...+. +.... +.. .+.
T Consensus 170 DGA~A~vl~~~~~---~~~~~--~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 244 (350)
T 4ewp_A 170 DGAGAVIVAASDE---PGISP--SVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVF 244 (350)
T ss_dssp EEEEEEEEEEESS---CCBCC--CEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHH
T ss_pred cchheeeeecccC---CCccc--eeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHH
Confidence 9999999986432 11111 11110 00000 000 000
Q ss_pred ----cchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 302 ----TAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 302 ----~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
....++++++|+++|++++|||+|.+|+.+......+.+.||++++++... ....+||+..+|-.+.+.+++++-
T Consensus 245 ~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g 323 (350)
T 4ewp_A 245 RWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEEN 323 (350)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHC
T ss_pred HHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhC
Confidence 012468899999999999999999999999999999999999999875432 245689999999999999988887
Q ss_pred HhcCCCeeEEeecccccceeeEEEEE
Q 015003 378 RHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 378 ~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+.+.|++.+...+|.|-++.++||+.
T Consensus 324 ~~~~Gd~vll~~fG~G~t~~~~vlr~ 349 (350)
T 4ewp_A 324 PELSGGLALQIGFGAGLVYGAQVVRL 349 (350)
T ss_dssp GGGTTSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCcCEEEEEEEchhhEeEEEEEEe
Confidence 77888998888888888899999975
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=233.67 Aligned_cols=257 Identities=16% Similarity=0.103 Sum_probs=200.8
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHH
Q 015003 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (414)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~ 103 (414)
++.+++...++++..+|+.+|+++||+++|+++++||.+++++++++...|..+..++..||++ ++++++++.+|++++
T Consensus 61 Gi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~ 139 (359)
T 3h78_A 61 GVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLL 139 (359)
T ss_dssp CCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHH
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHH
Confidence 4444444455789999999999999999999999999999999988777788999999999997 689999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCH
Q 015003 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (414)
Q Consensus 104 ~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 183 (414)
.||..|..+|++|.+++|||+++|.++.. ..+
T Consensus 140 ~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-~~~----------------------------------------------- 171 (359)
T 3h78_A 140 YGLQMARGQILAGLARHVLVVCGEVLSKR-MDC----------------------------------------------- 171 (359)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEEECGGG-CCC-----------------------------------------------
T ss_pred HHHHHHHHHHHCCCcCEEEEEEEchhccc-CCc-----------------------------------------------
Confidence 99999999999999999999999998761 000
Q ss_pred HHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccC
Q 015003 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (414)
Q Consensus 184 ~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (414)
++ . .. ..+..+||
T Consensus 172 ---------------------------------------------~d------------------~-~~---~t~~lfGD 184 (359)
T 3h78_A 172 ---------------------------------------------SD------------------R-GR---NLSILLGD 184 (359)
T ss_dssp ---------------------------------------------ST------------------T-TH---HHHTTBCE
T ss_pred ---------------------------------------------cc------------------c-cc---cccceecc
Confidence 00 0 00 01233899
Q ss_pred ceeEEEEeCHHHHHHcCCcceEEEEEEEEeecC--------C-----C-c-------------cc-c----------chH
Q 015003 264 GAAALVLVSGVKALELGLQVIAKIRGFADAAQA--------P-----E-W-------------FT-T----------APS 305 (414)
Q Consensus 264 GAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~--------~-----~-~-------------~~-~----------~~~ 305 (414)
||+|+||+..+. .+. .|.+....++. + . . +. . ...
T Consensus 185 GAaA~vl~~~~~---~~~----~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~ 257 (359)
T 3h78_A 185 GAGAVVVSAGES---LED----GLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLV 257 (359)
T ss_dssp EEEEEEEECCSC---SSS----EEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCC---CCC----ceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHH
Confidence 999999997531 011 12222111110 0 0 0 00 0 113
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCee
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYG 385 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~ 385 (414)
++++++|+++|++++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++ .+.|++.
T Consensus 258 ~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~v 333 (359)
T 3h78_A 258 RIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPD--IQPGQRV 333 (359)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGG--SCTTCEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHh--CCCCCEE
Confidence 68899999999999999999999999999999999999999988765 6678999999999988888877 5678888
Q ss_pred EEeecccccceeeEEEEEecce
Q 015003 386 VGGICNGGGGASALVLELMQAV 407 (414)
Q Consensus 386 l~~~~~~gg~~~a~vl~~~~~~ 407 (414)
+...++.|-++.+++|+..+.|
T Consensus 334 ll~~fG~G~t~~~~ll~~~~~~ 355 (359)
T 3h78_A 334 LVLTYGSGATWGAALYRKPEEV 355 (359)
T ss_dssp EEEEEETTTEEEEEEEECC---
T ss_pred EEEEEchhhhheeeeEEehhhh
Confidence 8888898889999999986654
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=232.65 Aligned_cols=246 Identities=19% Similarity=0.168 Sum_probs=196.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
.+..+|+.+|+++||+++|+ ++||.+++++.++++..+..+..++..||+++ +++++++++|+|++.||..|..+|+
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~-~~~~~v~~aCas~~~Al~~A~~~i~ 127 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVG-ALAFDLSAAATGFVYGLASVGSLIS 127 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTT-SEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCC-CcEEEEcCcChHHHHHHHHHHHHHH
Confidence 68999999999999999999 89999999988876656778899999999974 8999999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++.. ...
T Consensus 128 ~g~~~~vLv~g~e~~s~~--~~~--------------------------------------------------------- 148 (331)
T 2x3e_A 128 AGLADSALLVGVDTFSHT--LDP--------------------------------------------------------- 148 (331)
T ss_dssp TTSCSEEEEEEEECGGGG--SCT---------------------------------------------------------
T ss_pred cCCCCEEEEEEeeccccC--CCc---------------------------------------------------------
Confidence 999999999999987631 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
. ++ ..+.+ ++|||+|+||++.+
T Consensus 149 ------------~-------------------d~--------------------~~~~~-------~GdGA~A~vL~~~~ 170 (331)
T 2x3e_A 149 ------------A-------------------DR--------------------STRAL-------FGDGAGAVVLRAGD 170 (331)
T ss_dssp ------------T-------------------CH--------------------HHHHH-------BCCEEEEEEEEEEC
T ss_pred ------------c-------------------cc--------------------cccee-------eccccEEEEEEecC
Confidence 0 00 01122 79999999998765
Q ss_pred HHHHcCCcceEEEEEEEEeecCC--Cc----------------------cc--------cchHHHHHHHHHHcCCCCCCC
Q 015003 275 KALELGLQVIAKIRGFADAAQAP--EW----------------------FT--------TAPSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~~~--~~----------------------~~--------~~~~~a~~~al~~aGl~~~DI 322 (414)
.+ .+.+++ +....++.. +. .+ ....++++++|+++|++++||
T Consensus 171 ~a--~~~~i~----~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~di 244 (331)
T 2x3e_A 171 AE--EEGALL----AFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDL 244 (331)
T ss_dssp TT--STTBEE----EEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred CC--CCCceE----EEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 32 122222 222211110 00 00 123578999999999999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEE
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~ 402 (414)
|+|.+|+.++.....+.+.||++++++..+ +..+||+.+++....+.+++++-+.+++++.+...++.|.++.+++|+
T Consensus 245 d~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 245 HHLVPHQANTRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp SEEEECCCCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEcCCCHHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEE
Confidence 999999999999889999999998887654 567999999999999988887766677889999999999999999999
Q ss_pred Eeccee
Q 015003 403 LMQAVR 408 (414)
Q Consensus 403 ~~~~~~ 408 (414)
..+.|+
T Consensus 323 ~~~~~~ 328 (331)
T 2x3e_A 323 WPKIVP 328 (331)
T ss_dssp CCCCCC
T ss_pred ECCccc
Confidence 876654
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=252.73 Aligned_cols=264 Identities=20% Similarity=0.209 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-------------------CCCcHHHHHHHHCCCCCCcceee
Q 015003 38 TKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-------------------LGQAPARQAALGAGIPNSVVCTT 94 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-------------------~~~~~a~~va~~lgl~~~~~~~~ 94 (414)
..|+.+++++||+|||+++++|| .+++|+...++ .....+..|+..+|++ +|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~--GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC--SCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC--CCeee
Confidence 34999999999999999999999 78888765543 1234678999999995 79999
Q ss_pred EccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHH
Q 015003 95 INKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEI 174 (414)
Q Consensus 95 v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 174 (414)
|+++|+|++.||++|+++|++|++|++||+|+|.++. |..... |.
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~-p~~~~~-----------------------------~~----- 203 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLK-PNTSVQ-----------------------------FL----- 203 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCC-HHHHHH-----------------------------HH-----
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHHHH-----------------------------HH-----
Confidence 9999999999999999999999999999999999887 422210 00
Q ss_pred HHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccc
Q 015003 175 CANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVT 254 (414)
Q Consensus 175 ~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (414)
+.+.++ ++..|+| |+.+ .+|++
T Consensus 204 ---------------------------~~~~ls--------~~g~~~~---Fd~~-------------------adG~~- 225 (965)
T 3hhd_A 204 ---------------------------RLGMLS--------PEGTCKA---FDTA-------------------GNGYC- 225 (965)
T ss_dssp ---------------------------HHTCBC--------TTCCCCT---TBTT-------------------CCSBC-
T ss_pred ---------------------------hccCcC--------CCCcccc---chhc-------------------cCCcc-
Confidence 000111 2456777 6665 66777
Q ss_pred cCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc------ccchHHHHHHHHHHcCCCCCCCceeecc
Q 015003 255 AGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------TTAPSLAIPKAIANAGLEASQIDYYEIN 328 (414)
Q Consensus 255 ~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~------~~~~~~a~~~al~~aGl~~~DId~~~~h 328 (414)
++||++++||++.+.|+ ++++.|+|++...+..... ..+..++++++|+++|++++|||+||.|
T Consensus 226 ------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaH 295 (965)
T 3hhd_A 226 ------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAH 295 (965)
T ss_dssp ------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred ------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhcccccc
Confidence 69999999999987764 5789999999988764321 1245789999999999999999999999
Q ss_pred ccchhH----HHH-HHHHcCCC-CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc----------------------
Q 015003 329 EAFSVV----AIA-NQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK---------------------- 380 (414)
Q Consensus 329 d~~~~~----~~~-~~e~lGl~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------------- 380 (414)
.+++.. +.. +.+.++-. ..++.+.+.|..+||+.+|+|+..+++++++|+.+
T Consensus 296 gTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~ 375 (965)
T 3hhd_A 296 GTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGR 375 (965)
T ss_dssp CCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCc
Confidence 999842 332 34456532 34678888899999999999999999999999875
Q ss_pred ----------CCCeeEEeecccccceeeEEEEEecc
Q 015003 381 ----------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 381 ----------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
..++..+.+++.||+|+.+|||....
T Consensus 376 ~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~~ 411 (965)
T 3hhd_A 376 LQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNTQ 411 (965)
T ss_dssp EEECCSCEECCSCEEEEEEECTTSEEEEEEEEECCC
T ss_pred eeecCCCccCCCCeEEEecccCCCceEEEEeccCCc
Confidence 01234678899999999999997643
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=238.35 Aligned_cols=252 Identities=15% Similarity=0.080 Sum_probs=195.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHH
Q 015003 34 SVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQS 112 (414)
Q Consensus 34 ~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~ 112 (414)
+.+..+|+.+|+++||+++|+++++||.+++++..+ +..+..+..++..||++..++++++ +++|+|++.||..|..+
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~ 159 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF 159 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHH
Confidence 346689999999999999999999999999998877 5567889999999999755799999 89999999999999999
Q ss_pred HHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHH
Q 015003 113 IQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (414)
Q Consensus 113 I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~ 192 (414)
|++|.+++|||+|+|.++.. +..
T Consensus 160 i~~g~~~~vLv~g~e~~s~~-~~~-------------------------------------------------------- 182 (382)
T 1u0m_A 160 CTAYPEANALIVACEFCSLC-YQP-------------------------------------------------------- 182 (382)
T ss_dssp HHHSTTCEEEEEEEEEGGGG-CCT--------------------------------------------------------
T ss_pred HHcCCCCEEEEEEEeccchh-cCc--------------------------------------------------------
Confidence 99999999999999997641 000
Q ss_pred hHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeC
Q 015003 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (414)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s 272 (414)
++++ .+.. ..+.+ ++|||+|+||++
T Consensus 183 ---------------------------------~d~~-------~~~~--------~~~~l-------fGDGA~A~vL~~ 207 (382)
T 1u0m_A 183 ---------------------------------TDLG-------VGSL--------LCNGL-------FGDGIAAAVVRG 207 (382)
T ss_dssp ---------------------------------TCCS-------HHHH--------HHHHH-------BCEEEEEEEEET
T ss_pred ---------------------------------ccCC-------HHHh--------hccch-------hcCCcEEEEEec
Confidence 0000 0000 00122 799999999987
Q ss_pred HHHHHHcCCcceEEEEEEEEee--cCC------------------Ccc---ccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 273 GVKALELGLQVIAKIRGFADAA--QAP------------------EWF---TTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~--~~~------------------~~~---~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
.+. .+ .+|.+..... +.. ..+ ..... +++++|+++|++++|||+|.+|+
T Consensus 208 ~~~---~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~ 279 (382)
T 1u0m_A 208 RGG---TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHA 279 (382)
T ss_dssp TTC---SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEEC
T ss_pred cCC---CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECC
Confidence 542 11 3455544321 110 000 11234 89999999999999999999999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEecc
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.++.....+.+.||+++++++++ ..+..+||+.+++....+.+++++-+.+.|++.+...++.|.++.+++|+..++
T Consensus 280 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~~~~ 357 (382)
T 1u0m_A 280 GGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCWQTA 357 (382)
T ss_dssp SHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEEeec
Confidence 99999999999999999887642 235679999999999999998887666678888888888888999999988643
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-27 Score=237.52 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=196.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...+..+..++..||++..++.+++ +++|+|++.||..|..+|
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999998887 5567889999999999755678898 899999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++.. +.+ +.+++
T Consensus 190 ~~G~~~~vLv~g~e~~s~~-~~~-------------------------------------------~~~r~--------- 216 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSVN-AVF-------------------------------------------ADDIN--------- 216 (393)
T ss_dssp HHSTTCEEEEEEEEECGGG-CCC-------------------------------------------CSSHH---------
T ss_pred HcCCCCEEEEEEEEecccc-CCC-------------------------------------------CCCHH---------
Confidence 9999999999999998751 000 00000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+...+..+||||+|+||++.
T Consensus 217 ------------------------------------------------------------~~~~~~lfGDGA~A~vL~~~ 236 (393)
T 1ted_A 217 ------------------------------------------------------------DVVIHSLFGDGCAALVIGAS 236 (393)
T ss_dssp ------------------------------------------------------------HHHHHHHBCEEEEEEEEEEE
T ss_pred ------------------------------------------------------------HhhhhhhhcCccEEEEEecC
Confidence 00011227999999999876
Q ss_pred HHHHHcCCcceEEEEEEEEe--ecCCCc-------------cc--------cchHHHHHHHHHHcCCCCCCCceeecccc
Q 015003 274 VKALELGLQVIAKIRGFADA--AQAPEW-------------FT--------TAPSLAIPKAIANAGLEASQIDYYEINEA 330 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~--~~~~~~-------------~~--------~~~~~a~~~al~~aGl~~~DId~~~~hd~ 330 (414)
+.+...+. .+.+|.+++.. .+.... .+ ....++++++|+++|++++|||+|.+|+.
T Consensus 237 ~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~ 315 (393)
T 1ted_A 237 QVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPG 315 (393)
T ss_dssp CTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCS
T ss_pred CCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCC
Confidence 53211122 34577777544 221110 01 12346889999999999999999999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHh-cCCCeeEEeecccccceeeEEEEEe
Q 015003 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRH-KKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~-~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+......+.+.||++++++..+ -.+..+||+.+++....+.+++++-+. +.+++.+...+++|.++.+++|+..
T Consensus 316 ~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 316 GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeec
Confidence 9999999999999999887532 124568999999988888888776554 3678888888888889999999864
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-27 Score=232.86 Aligned_cols=250 Identities=14% Similarity=0.067 Sum_probs=191.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ +..+..+..++..||+++.++++++. ++|+|++.||..|..+|
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i 171 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA 171 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999998876 45678899999999997557999996 89999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+|+|.++...... .+++
T Consensus 172 ~~g~~~~vLv~g~e~~s~~~~~~--------------------------------------------~dr~--------- 198 (374)
T 2h84_A 172 KASPRNRILVVCTEVCSLHFSNT--------------------------------------------DGGD--------- 198 (374)
T ss_dssp TTCTTCEEEEEEEECCGGGCCCS--------------------------------------------SSHH---------
T ss_pred HcCCCCEEEEEEEEecchhhcCC--------------------------------------------CCHH---------
Confidence 99999999999999987410000 0000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
+..++..++|||+|+||++.
T Consensus 199 ------------------------------------------------------------~~~~~~lfGDGA~A~vL~~~ 218 (374)
T 2h84_A 199 ------------------------------------------------------------QMVASSIFADGSAAYIIGCN 218 (374)
T ss_dssp ------------------------------------------------------------HHHHHHHBCCEEEEEEEESS
T ss_pred ------------------------------------------------------------HHhhhhhhccCcEEEEEecC
Confidence 00011227999999999986
Q ss_pred HHHHHcCCcceEEEEEEEEeecC-----------CCc---------c---ccchHHHHHHHHHHcC------CCCCCCce
Q 015003 274 VKALELGLQVIAKIRGFADAAQA-----------PEW---------F---TTAPSLAIPKAIANAG------LEASQIDY 324 (414)
Q Consensus 274 ~~a~~~~~~~~~~i~g~~~~~~~-----------~~~---------~---~~~~~~a~~~al~~aG------l~~~DId~ 324 (414)
+.+++. .+ .++.+.+..... ... + .....++++++|+++| ++++|||+
T Consensus 219 ~~~~~~--~~-~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~ 295 (374)
T 2h84_A 219 PRIEET--PL-YEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEF 295 (374)
T ss_dssp CCTTCC--CC-EEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEE
T ss_pred CCcccC--Cc-eeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCE
Confidence 543211 12 366665543110 000 0 0123578899999999 99999999
Q ss_pred eeccccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEE
Q 015003 325 YEINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 325 ~~~hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
| +|+.++.....+.+.||++++++..+ -.+..+||+..++....+.+++++-+ .|++.+...+++|.++.+++|+.
T Consensus 296 ~-~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 296 L-IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp E-ECCCCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred e-ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccchhhhhhhhee
Confidence 9 99999999999999999999887642 22456899999998888888876544 57788888888888889999886
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 373 ~ 373 (374)
T 2h84_A 373 V 373 (374)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=222.44 Aligned_cols=240 Identities=16% Similarity=0.075 Sum_probs=186.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHc
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQL 115 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~s 115 (414)
+..+|+.+|+++||+++|+++++||.|++++++++...|..+..++..||++ +++++++.+|+++++||..|..+|++
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv~~aC~g~~~aL~~A~~~i~~ 193 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDMNVACSSATFGLKTAADFVGG 193 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEECCccHHHHHHHHHHHHHHHC
Confidence 4789999999999999999999999999999988777888999999999993 79999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHH
Q 015003 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (414)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~ 195 (414)
|.+++|||+|+|.+|..
T Consensus 194 g~~~~vLvvg~E~~S~~--------------------------------------------------------------- 210 (392)
T 3led_A 194 GSVDAVLMVNPEICSGH--------------------------------------------------------------- 210 (392)
T ss_dssp TSCSEEEEEEEEEGGGG---------------------------------------------------------------
T ss_pred CCCCEEEEEeehhcCCc---------------------------------------------------------------
Confidence 99999999999998751
Q ss_pred hHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHH
Q 015003 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (414)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~ 275 (414)
++.++ ++ .|..+||||+|+||+..+.
T Consensus 211 ------------------------------~d~~d------------------r~------t~~lFGDGA~A~vl~~~~~ 236 (392)
T 3led_A 211 ------------------------------LNFRD------------------RD------SHFIFGDVATAAIVERADD 236 (392)
T ss_dssp ------------------------------CCTTC------------------TT------TTTTBCEEEEEEEEEEGGG
T ss_pred ------------------------------CCcCc------------------cc------CCcccccccEEEEEEecCC
Confidence 00000 10 2445899999999997642
Q ss_pred HHHcCCcceEEEEEEEEeecC---------------CCc-------cc-c----------chHHHHHHHHHHcCCCCCCC
Q 015003 276 ALELGLQVIAKIRGFADAAQA---------------PEW-------FT-T----------APSLAIPKAIANAGLEASQI 322 (414)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~---------------~~~-------~~-~----------~~~~a~~~al~~aGl~~~DI 322 (414)
. . +...|.+....++. +.. +. . ...++++++|+++|++++||
T Consensus 237 ~----~-~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dI 311 (392)
T 3led_A 237 A----Q-GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGL 311 (392)
T ss_dssp C----C-SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred C----C-CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 1 0 11244444332210 000 00 0 11357899999999999999
Q ss_pred ceeeccccchhHHHHHHHHc-CC--CCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeE
Q 015003 323 DYYEINEAFSVVAIANQKLL-GL--DPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASAL 399 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~l-Gl--~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~ 399 (414)
|+|.+|+.+......+.+.| |+ +++++..+ ...+||+..+|-.+.+.++.. +.+.|++.+...+++|-++.++
T Consensus 312 d~~v~Hqan~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsipl~L~~~~~--~~~~Gd~vll~gfG~G~t~~~~ 387 (392)
T 3led_A 312 KRMWLHQANINMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSIIAFHKHQD--DMAQGDLGLICSFGAGYSAGTV 387 (392)
T ss_dssp SEEEECSSCHHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHHHHHHHCCT--TCCTTCEEEEEEEETTTEEEEE
T ss_pred cEEEEcCCCHHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHHHHHHHHhC--CCCCCCEEEEEEEChhhEeEEE
Confidence 99999999999988889986 75 55665544 677899999998877766521 3346778888888888899999
Q ss_pred EEEE
Q 015003 400 VLEL 403 (414)
Q Consensus 400 vl~~ 403 (414)
+|+.
T Consensus 388 ll~~ 391 (392)
T 3led_A 388 FVQK 391 (392)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=218.00 Aligned_cols=249 Identities=15% Similarity=0.112 Sum_probs=189.8
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+-..++. ..+|+.+|+++||+++|+++++||.++++++++++..|..+..++..||+++ +++++++++|+|+
T Consensus 39 ~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~-~~~~~v~~aC~s~ 116 (321)
T 3il6_A 39 TGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE-AFAFDISAACSGF 116 (321)
T ss_dssp HSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT-CEEEEECCGGGHH
T ss_pred cCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC-ceEEEeCcccHHH
Confidence 4555554333444 9999999999999999999999999999999887778889999999999985 9999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTIT 182 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t 182 (414)
++||..|..+|++|.+++|||+++|.+|..
T Consensus 117 ~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-------------------------------------------------- 146 (321)
T 3il6_A 117 VYALSMAEKLVLSGRYQTGLVIGGETFSKM-------------------------------------------------- 146 (321)
T ss_dssp HHHHHHHHHHHHTSSCCCEEEEEEECGGGG--------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEcccccc--------------------------------------------------
Confidence 999999999999999999999999998751
Q ss_pred HHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCccc
Q 015003 183 RDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIIS 262 (414)
Q Consensus 183 ~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 262 (414)
++.++ +. .+..+|
T Consensus 147 -------------------------------------------~~~~d------------------r~------~~~lfG 159 (321)
T 3il6_A 147 -------------------------------------------LDWTD------------------RS------TAVLFG 159 (321)
T ss_dssp -------------------------------------------SCTTC------------------TT------TGGGBC
T ss_pred -------------------------------------------CCccc------------------cc------cceeec
Confidence 00000 10 123489
Q ss_pred CceeEEEEeCHHHHHHcCCcceEEEEEEEEeec---------------CCCc---------ccc-c------hHHHHHHH
Q 015003 263 DGAAALVLVSGVKALELGLQVIAKIRGFADAAQ---------------APEW---------FTT-A------PSLAIPKA 311 (414)
Q Consensus 263 DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~---------------~~~~---------~~~-~------~~~a~~~a 311 (414)
|||+|+||+..+. + . +.+....++ .+.. +.. + ..+.+.++
T Consensus 160 DGA~A~vl~~~~~----~-~----i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 230 (321)
T 3il6_A 160 DGAAGVLIEAAET----P-H----FLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQN 230 (321)
T ss_dssp CEEEEEEEEEESS----C-C----EEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHH
T ss_pred cccEEEEEEEcCC----C-C----EEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHH
Confidence 9999999997542 1 1 111111111 0000 000 0 01223333
Q ss_pred HHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCC--CeeEEee
Q 015003 312 IANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKG--KYGVGGI 389 (414)
Q Consensus 312 l~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--~~~l~~~ 389 (414)
++++ +.++|||+|.+|+.+......+.+.||++++++..+ ...+||+..+|-.+.+.+++++-+.+.| ++.+...
T Consensus 231 i~~~-l~~~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~ 307 (321)
T 3il6_A 231 ILSL-VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN--MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTG 307 (321)
T ss_dssp HHTT-CCGGGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC--GGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEE
T ss_pred HHHH-cCcccCCEEEEcCCCHHHHHHHHHHcCcCHHHhhhh--HhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEE
Confidence 3332 228999999999999999999999999999988764 6779999999988888888876666677 8888888
Q ss_pred cccccceeeEEEE
Q 015003 390 CNGGGGASALVLE 402 (414)
Q Consensus 390 ~~~gg~~~a~vl~ 402 (414)
++.|-++.+++|+
T Consensus 308 fG~G~t~~~~~l~ 320 (321)
T 3il6_A 308 FGGGLTWGSLLLT 320 (321)
T ss_dssp EETTTEEEEEEEE
T ss_pred EehhheeEEEEEE
Confidence 8998899999987
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=220.98 Aligned_cols=259 Identities=20% Similarity=0.156 Sum_probs=197.0
Q ss_pred ecCccccCCCCCCCC--CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecC-CCCCCcHHHHHHHHCCCCCCcceeeEcc
Q 015003 21 ARTPMGGFLGSLSSV--SATKLGSIAIECALKRANVKPLLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTINK 97 (414)
Q Consensus 21 ~~t~~~~~~~~~~~~--~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~-~~~~~~~a~~va~~lgl~~~~~~~~v~~ 97 (414)
.+|++.+++...+++ +..+|+.+|+++||+++|+++++||.|++++++. ....+.++..++..||++ +++++++++
T Consensus 36 ~~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~ 114 (357)
T 3s3l_A 36 KLRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQ 114 (357)
T ss_dssp HHHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEEC
T ss_pred HHcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcC
Confidence 346666655444445 8999999999999999999999999999998741 122346789999999996 699999999
Q ss_pred CCchHHHHHHHHHHHHHcCCCC--eEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 98 VCSSGMKAVMLAAQSIQLGIND--IVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 98 aC~s~~~al~~A~~~I~sG~~~--~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
+|+++++||..|..+|++|.++ +|||+++|.++. +.
T Consensus 115 aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~-~~----------------------------------------- 152 (357)
T 3s3l_A 115 RCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAG-PR----------------------------------------- 152 (357)
T ss_dssp GGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCT-TT-----------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccc-cc-----------------------------------------
Confidence 9999999999999999999999 999999999884 10
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTA 255 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (414)
++.. .. +
T Consensus 153 --------------------------------------------------~~~~-------------------~~---~- 159 (357)
T 3s3l_A 153 --------------------------------------------------IDRW-------------------NS---V- 159 (357)
T ss_dssp --------------------------------------------------CCTT-------------------TS---S-
T ss_pred --------------------------------------------------cccc-------------------cc---c-
Confidence 0000 00 0
Q ss_pred CCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCC-------------C------cc--c-------------
Q 015003 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAP-------------E------WF--T------------- 301 (414)
Q Consensus 256 ~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~-------------~------~~--~------------- 301 (414)
.+..+||||+|+||+..+. + ..|.+....++.. . .. .
T Consensus 160 -~~~lfGDGA~A~vl~~~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 230 (357)
T 3s3l_A 160 -DVTMYGDGAAALVLSTRDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLP 230 (357)
T ss_dssp -SSCCBCCEEEEEEEESSCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCT
T ss_pred -CCcccccccEEEEEecCCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchh
Confidence 2344899999999987531 1 2344433322210 0 00 0
Q ss_pred -------cchHHHHHHHHHHcCCCCCCCceeec-cccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHH
Q 015003 302 -------TAPSLAIPKAIANAGLEASQIDYYEI-NEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTL 373 (414)
Q Consensus 302 -------~~~~~a~~~al~~aGl~~~DId~~~~-hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~ 373 (414)
....++++++|+++|++++|||+|.+ |+.+.. ...+.+.||++++++...- ...+||+..++-.+.+.++
T Consensus 231 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~~-~~~~GNt~aAsipl~L~~~ 308 (357)
T 3s3l_A 231 DLTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWAY-GRTTGHVGAGDQYAGLAHL 308 (357)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHHH-HHHHCBCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHHh-ccccccchHhHHHHHHHHH
Confidence 01246789999999999999999996 999988 7788999999999876421 1237999999988888888
Q ss_pred HHHHHhcCCCeeEEeecccccceeeEEEEEecc
Q 015003 374 LGVLRHKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 374 ~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+++-+.+.|++.+...++.|.++.+++|+..+.
T Consensus 309 ~~~g~l~~Gd~vll~~fG~G~t~~a~ll~~~~~ 341 (357)
T 3s3l_A 309 VENALVQPGDRVLLFGGGAGYTCTAAVVEILRM 341 (357)
T ss_dssp HHTTCCCTTCEEEEECCBTTTEEEEEEEEECCC
T ss_pred HHcCCCCCCCEEEEEEEchhhhheeeeEEeccC
Confidence 876666678888888888888999999998765
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=263.74 Aligned_cols=280 Identities=18% Similarity=0.175 Sum_probs=211.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC--------eEEEEeecCCC------------------------CCCcHHHHHHH-
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ--------EVFFGNVLSAN------------------------LGQAPARQAAL- 82 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id--------~vi~g~~~~~~------------------------~~~~~a~~va~- 82 (414)
....|+.+|+++||+|||+++++|+ .+++|+..+.. .....+..++.
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 4567999999999999999999885 58888764321 01224556665
Q ss_pred HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 83 ~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
.+|++ +|+++++++|+|++.||..|+++|++|++|++||+|+|.++. .....-
T Consensus 2726 ~lGl~--GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~--~~~~~f----------------------- 2778 (3089)
T 3zen_D 2726 YVGGY--GAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTL--EAIIGF----------------------- 2778 (3089)
T ss_dssp TTCCC--SCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHHH-----------------------
T ss_pred HcCCC--CCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCH--HHHHHH-----------------------
Confidence 46994 799999999999999999999999999999999999999653 211100
Q ss_pred ccCCchHHHH-HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHh
Q 015003 163 YNDFGMGVCA-EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (414)
Q Consensus 163 ~~~~~~~~~a-~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (414)
..++.++ +.++.+++. .++..|+| |+.+
T Consensus 2779 ---~~~~als~~~~~~~~~~---------------------------------sp~~~crp---Fd~~------------ 2807 (3089)
T 3zen_D 2779 ---GDMAATADTEMMRAKGI---------------------------------SDSKFSRA---NDRR------------ 2807 (3089)
T ss_dssp ---HHHTCBCCHHHHHHTTC---------------------------------CTTTSCCS---SBTT------------
T ss_pred ---HHhhhhhcchhhhhccC---------------------------------CcccccCc---cccC------------
Confidence 0000000 001111111 12556777 6666
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc------------ccchHHHHH
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------------TTAPSLAIP 309 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~------------~~~~~~a~~ 309 (414)
++|++ ++|||+++||++.+.|+++|.++++.|.+.+...+..... ..+..++++
T Consensus 2808 -------~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~ 2873 (3089)
T 3zen_D 2808 -------RLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLA 2873 (3089)
T ss_dssp -------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHH
T ss_pred -------CCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHH
Confidence 67887 7999999999999999999999999888888766532210 013346899
Q ss_pred HHHHHcCCCCCCCceeeccccchhH----HH----HHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 310 KAIANAGLEASQIDYYEINEAFSVV----AI----ANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 310 ~al~~aGl~~~DId~~~~hd~~~~~----~~----~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
++|+++|++++|||+|+.|.+++.. +. .+.+.||... .+++++++|..+||+.||+|+.+++.++++|+.+
T Consensus 2874 ~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g 2953 (3089)
T 3zen_D 2874 RSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDG 2953 (3089)
T ss_dssp HHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcC
Confidence 9999999999999999999988852 22 3556788765 5799999999999999999999999999999864
Q ss_pred C----------------------------------CCeeEEeecccccceeeEEEEEecce
Q 015003 381 K----------------------------------GKYGVGGICNGGGGASALVLELMQAV 407 (414)
Q Consensus 381 ~----------------------------------~~~~l~~~~~~gg~~~a~vl~~~~~~ 407 (414)
- .++.+.++++.||+|+.+||+..+.+
T Consensus 2954 ~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~ 3014 (3089)
T 3zen_D 2954 VIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAF 3014 (3089)
T ss_dssp CBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGT
T ss_pred ccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchh
Confidence 0 24577888999999999999987763
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=220.20 Aligned_cols=255 Identities=15% Similarity=0.126 Sum_probs=189.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.|+++++++ +..|..+..++..||+++..+ +++++.+|+++++||..|..+|+
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~ 179 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999988 667889999999999985443 89999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++..-.
T Consensus 180 sg~~~~vLvvg~E~~s~~~~------------------------------------------------------------ 199 (393)
T 3ov2_A 180 NNRGARVLVVACEITVLSFR------------------------------------------------------------ 199 (393)
T ss_dssp HSTTCEEEEEEEECGGGTCC------------------------------------------------------------
T ss_pred cCCCCEEEEEEEeccchhcc------------------------------------------------------------
Confidence 99999999999999873100
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++++ + .+-.+..+.++||||+|+||+..+
T Consensus 200 --------------------------------~~~d------------------~-~~~~~~~~~lFGDGAaA~vl~~~~ 228 (393)
T 3ov2_A 200 --------------------------------GPNE------------------G-DFEALAGQAGFGDGAGAVVVGADP 228 (393)
T ss_dssp --------------------------------CCCT------------------T-CHHHHHHHHHBCCEEEEEEEESSC
T ss_pred --------------------------------CCcc------------------c-chhhhcccccccCccEEEEEEecC
Confidence 0000 0 000001223389999999999754
Q ss_pred HHHHcCCcceEEEEEEEEeec-CC-------------------Ccc---ccchHHHHHHHHHHcCCCC-CCCceeecccc
Q 015003 275 KALELGLQVIAKIRGFADAAQ-AP-------------------EWF---TTAPSLAIPKAIANAGLEA-SQIDYYEINEA 330 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~-~~-------------------~~~---~~~~~~a~~~al~~aGl~~-~DId~~~~hd~ 330 (414)
.. .. ..+...+...+.... .. ..+ .....++++++|+++|++. +|| ++.+|+.
T Consensus 229 ~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~ 305 (393)
T 3ov2_A 229 LE-GI-EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPG 305 (393)
T ss_dssp CT-TT-CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCC
T ss_pred CC-cc-cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCC
Confidence 21 11 112223333222111 00 000 0112468999999999997 888 8999999
Q ss_pred chhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHH-H---hcCC---CeeEEeecccccceeeEEEE
Q 015003 331 FSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVL-R---HKKG---KYGVGGICNGGGGASALVLE 402 (414)
Q Consensus 331 ~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql-~---~~~~---~~~l~~~~~~gg~~~a~vl~ 402 (414)
+......+.+.||++++++..+ --...+||+..+|-...+.++.++. + .+.| ++.+...+|.|-++.+++|+
T Consensus 306 n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~ 385 (393)
T 3ov2_A 306 NWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLR 385 (393)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEE
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeE
Confidence 9999999999999999987542 1134589999999988888887651 1 1234 77888888888899999999
Q ss_pred Eec
Q 015003 403 LMQ 405 (414)
Q Consensus 403 ~~~ 405 (414)
..+
T Consensus 386 ~~~ 388 (393)
T 3ov2_A 386 SMP 388 (393)
T ss_dssp ECB
T ss_pred Ecc
Confidence 764
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=220.67 Aligned_cols=251 Identities=16% Similarity=0.084 Sum_probs=182.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++..+ +++++.+|++++.||..|..+|+
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~ 173 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999888 667889999999999985443 89999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++.. +..
T Consensus 174 sg~~~~vLvvg~E~~s~~-~~~---------------------------------------------------------- 194 (387)
T 3oit_A 174 NSRGARVLVVAAELTLMY-FTG---------------------------------------------------------- 194 (387)
T ss_dssp SSTTCEEEEEEEECGGGT-CCC----------------------------------------------------------
T ss_pred cCCCCEEEEEEEeccchh-ccC----------------------------------------------------------
Confidence 999999999999998731 000
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
| - | + .+-.+..+.++||||+|+||+..+
T Consensus 195 -----------------~-------------~--d-------------------~-~~~~~~~~~lFGDGAaA~vl~~~~ 222 (387)
T 3oit_A 195 -----------------P-------------D--E-------------------G-CFRTLLVQGLFGDGAAAVIVGADA 222 (387)
T ss_dssp -----------------C-------------C--S-------------------S-SCHHHHHHHHBCCEEEEEEEESSC
T ss_pred -----------------c-------------c--c-------------------c-chHhhhcccccccceEEEEEecCC
Confidence 0 0 0 0 000011233489999999999754
Q ss_pred HHHHcCCcceEEEEEEEEeec-CC-C---------c----cc--------cchHHHHHHHHHHc----CCCCCCCc--ee
Q 015003 275 KALELGLQVIAKIRGFADAAQ-AP-E---------W----FT--------TAPSLAIPKAIANA----GLEASQID--YY 325 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~-~~-~---------~----~~--------~~~~~a~~~al~~a----Gl~~~DId--~~ 325 (414)
. . ...+...+.+.+.... .. . . +. ....++++++|+++ |++ |+| +|
T Consensus 223 ~--~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~ 297 (387)
T 3oit_A 223 D--D-VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFW 297 (387)
T ss_dssp C--S-SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEE
T ss_pred C--c-ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEE
Confidence 1 1 1122345555443221 00 0 0 00 01135777888888 887 555 99
Q ss_pred eccccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC------CeeEEeecccccceee
Q 015003 326 EINEAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG------KYGVGGICNGGGGASA 398 (414)
Q Consensus 326 ~~hd~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~------~~~l~~~~~~gg~~~a 398 (414)
.+|+.+......+.+.||++++++..+ --...+||+..+|-...+.++.++ +.+.| ++.+...+|.|-++.+
T Consensus 298 v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~fG~G~t~~~ 376 (387)
T 3oit_A 298 AVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMAFGPGMTVDA 376 (387)
T ss_dssp EECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEEEETTTEEEE
T ss_pred EECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEEecccceeee
Confidence 999999999999999999999987542 113458999999988888887655 33333 6788888888889999
Q ss_pred EEEEEe
Q 015003 399 LVLELM 404 (414)
Q Consensus 399 ~vl~~~ 404 (414)
++|+..
T Consensus 377 ~ll~~~ 382 (387)
T 3oit_A 377 MLLHAT 382 (387)
T ss_dssp EEEEEC
T ss_pred eeeEec
Confidence 999975
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=216.39 Aligned_cols=257 Identities=14% Similarity=0.058 Sum_probs=194.4
Q ss_pred ecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCC
Q 015003 21 ARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVC 99 (414)
Q Consensus 21 ~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC 99 (414)
.+|++.+++.... .+..+|+.+|+++||+++|+++++||.++++++++ ...|..+.+++..||+++.++.+++ +.+|
T Consensus 122 ~rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~~~P~~a~~v~~~LGl~~~~~~~~v~~~~C 199 (413)
T 3v7i_A 122 ASQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTT-PALPGLDVALANRLPLRGDTMLLPATQWAC 199 (413)
T ss_dssp CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSS-CCSSCHHHHHHHHTTCCTTCEEEEESSCGG
T ss_pred cCCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCC-CCcCHHHHHHHHHhCCCCCceEEEeeCCcc
Confidence 3567766643323 47889999999999999999999999999999887 4678899999999999866888999 9999
Q ss_pred chHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHc
Q 015003 100 SSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKH 179 (414)
Q Consensus 100 ~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 179 (414)
+++++||..|..+|++|.+++|||+|+|.+|.. +
T Consensus 200 agg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~-~--------------------------------------------- 233 (413)
T 3v7i_A 200 VAGTRSLALAADLVAADPDRVVLVVISEALSTT-Y--------------------------------------------- 233 (413)
T ss_dssp GHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG-C---------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc-c---------------------------------------------
Confidence 999999999999999999999999999999861 0
Q ss_pred CCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCC
Q 015003 180 TITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNAS 259 (414)
Q Consensus 180 g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 259 (414)
+.++ ++ .-.+..+.
T Consensus 234 -----------------------------------------------~~~d------------------~~-~~~lv~~~ 247 (413)
T 3v7i_A 234 -----------------------------------------------QPAD------------------DT-LESLIVRL 247 (413)
T ss_dssp -----------------------------------------------CSSC------------------CS-TTHHHHHH
T ss_pred -----------------------------------------------Cccc------------------cc-hhhhhcce
Confidence 0000 00 00011133
Q ss_pred cccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeec-CC-Cc-----------cc---------cchHHHHHHHHH----
Q 015003 260 IISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ-AP-EW-----------FT---------TAPSLAIPKAIA---- 313 (414)
Q Consensus 260 ~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~-~~-~~-----------~~---------~~~~~a~~~al~---- 313 (414)
.+||||+|+||++.+.. .+...+.+...... +. .. +. ....++++++|+
T Consensus 248 LFGDGAaAvvl~~~~~~-----~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~ 322 (413)
T 3v7i_A 248 LFADTAVAAVVTGRPRP-----ESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYE 322 (413)
T ss_dssp HBCCEEEEEEEESSCCT-----TEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTS
T ss_pred eeccccEEEEEEecCCC-----CCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccc
Confidence 48999999999975420 11123444332211 00 00 00 012467889999
Q ss_pred --HcCCCCCCCceeeccccchhHHHHHHHHcC--CCCCCc---CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeE
Q 015003 314 --NAGLEASQIDYYEINEAFSVVAIANQKLLG--LDPEQV---NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGV 386 (414)
Q Consensus 314 --~aGl~~~DId~~~~hd~~~~~~~~~~e~lG--l~~~~v---n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l 386 (414)
++|++ ||+|.+|+.+......+.+.|| ++++++ ..+ +. +||+..+|-...+.++. +-+.+.|++.+
T Consensus 323 ~~~~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~--l~-~GNtssAsi~~~L~~~~-~~~~~~Gd~vl 395 (413)
T 3v7i_A 323 DDPSSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDS--YT-SGNRGGAAVFDILRRAH-DAGQKTGSRAV 395 (413)
T ss_dssp SSCTTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHH--HT-TCBCGGGHHHHHHHHHH-HHCCCTTCEEE
T ss_pred cccCCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceE--ec-eeChHHHHHHHHHHHHH-hCCCCCCCEEE
Confidence 89997 9999999999999999999999 999987 222 45 89999999888888877 43445778889
Q ss_pred EeecccccceeeEEEEE
Q 015003 387 GGICNGGGGASALVLEL 403 (414)
Q Consensus 387 ~~~~~~gg~~~a~vl~~ 403 (414)
...+|.|-++.+++|+.
T Consensus 396 l~~fG~Glt~~~~ll~w 412 (413)
T 3v7i_A 396 LYAAAPGLTATALEGEW 412 (413)
T ss_dssp EEEEETTTEEEEEEEEE
T ss_pred EEEECHHHhHhhhheEe
Confidence 88888888999999875
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=214.79 Aligned_cols=256 Identities=14% Similarity=0.075 Sum_probs=192.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I 113 (414)
.+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|+|++.||..|..+|
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999998875 456778999999999975454 8999999999999999999999
Q ss_pred HcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHh
Q 015003 114 QLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRS 193 (414)
Q Consensus 114 ~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~ 193 (414)
++|.+++|||+++|.++.. +..
T Consensus 175 ~~g~~~~vLvvg~e~~s~~-~~~--------------------------------------------------------- 196 (387)
T 3a5r_A 175 ENNKGARVLIVCSEMTTTC-FRG--------------------------------------------------------- 196 (387)
T ss_dssp HHSTTCEEEEEEEECCTTT-CCC---------------------------------------------------------
T ss_pred HhCCCCEEEEEEEeccchh-hcC---------------------------------------------------------
Confidence 9999999999999998751 000
Q ss_pred HHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCH
Q 015003 194 FKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSG 273 (414)
Q Consensus 194 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~ 273 (414)
| .+.+ +-....+..+||||+|+||++.
T Consensus 197 ------------------~-------------~d~~----------------------~~~~~~~~lfGDGA~A~vl~~~ 223 (387)
T 3a5r_A 197 ------------------P-------------SETH----------------------LDSMIGQAILGDGAAAVIVGAD 223 (387)
T ss_dssp ------------------C-------------CSSC----------------------CSSTTHHHHBCCEEEEEEEESS
T ss_pred ------------------C-------------Cccc----------------------hhhccccceeccceeEEEEecC
Confidence 0 0000 0001122238999999999875
Q ss_pred HHHHHcC-CcceEEEEEEEEeecC-C-Cc-----------c--c--------cchHHHHHHHHHHcCCC-CCCCceeecc
Q 015003 274 VKALELG-LQVIAKIRGFADAAQA-P-EW-----------F--T--------TAPSLAIPKAIANAGLE-ASQIDYYEIN 328 (414)
Q Consensus 274 ~~a~~~~-~~~~~~i~g~~~~~~~-~-~~-----------~--~--------~~~~~a~~~al~~aGl~-~~DId~~~~h 328 (414)
+.. + ..+..++.+.+..... . .. + . ....++++++|+++|++ .+|| ++.+|
T Consensus 224 ~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~H 299 (387)
T 3a5r_A 224 PDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAH 299 (387)
T ss_dssp CCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEEC
T ss_pred CCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEEC
Confidence 421 1 1112345544432110 0 00 0 0 11246788999999998 8888 89999
Q ss_pred ccchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeE
Q 015003 329 EAFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASAL 399 (414)
Q Consensus 329 d~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~ 399 (414)
+.+......+.+.||++++++..+ -.+..+||+.++|..+.+.++.++-+ +.| ++.+...++.|.++.++
T Consensus 300 q~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ 378 (387)
T 3a5r_A 300 PGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVLFGFGPGITVETV 378 (387)
T ss_dssp CSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEE
T ss_pred CCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCcceeeeh
Confidence 999999888999999999887542 12456899999999999999988766 545 78888888888899999
Q ss_pred EEEEecce
Q 015003 400 VLELMQAV 407 (414)
Q Consensus 400 vl~~~~~~ 407 (414)
+|+..+.+
T Consensus 379 ll~~~~~~ 386 (387)
T 3a5r_A 379 VLRSVPVI 386 (387)
T ss_dssp EEEECBCC
T ss_pred hheecccc
Confidence 99886543
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=236.92 Aligned_cols=259 Identities=15% Similarity=0.027 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCC-cceeeEccCCchHHHHHHHHHHHHHc
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNS-VVCTTINKVCSSGMKAVMLAAQSIQL 115 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~-~~~~~v~~aC~s~~~al~~A~~~I~s 115 (414)
..+|+.+|+++||+++|+++++||.++++++.+ ...|..+..++..||+++. +++++++++|++++.||..|..+|++
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s 767 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence 567999999999999999999999999998554 5578899999999999632 46899999999999999999999999
Q ss_pred CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHH
Q 015003 116 GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSFK 195 (414)
Q Consensus 116 G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~ 195 (414)
|.+++|||+|+|.++... ..
T Consensus 768 G~~~~vLvvg~e~~~~~~-~~----------------------------------------------------------- 787 (979)
T 3tsy_A 768 NAGARVLVVCSEITVVTF-RG----------------------------------------------------------- 787 (979)
T ss_dssp STTCEEEEEEEECTTTTC-CC-----------------------------------------------------------
T ss_pred CCCCEEEEEEEEecchhe-eC-----------------------------------------------------------
Confidence 999999999999865410 00
Q ss_pred hHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHH
Q 015003 196 RGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVK 275 (414)
Q Consensus 196 ~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~ 275 (414)
++ ....-...+++.+||||+|+||++.+.
T Consensus 788 --------------------------------~~-------------------~~~~~~~~~~~lfGDGA~A~vL~~~~~ 816 (979)
T 3tsy_A 788 --------------------------------PS-------------------EDALDSLVGQALFGDGSAAVIVGSDPD 816 (979)
T ss_dssp --------------------------------CC-------------------SSCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred --------------------------------CC-------------------ccCHHHHhhhhhccCceEEEEEecCCC
Confidence 00 000001113344899999999998665
Q ss_pred HHHcCCcceEEEEEEEEeecCCCcc-----c----------------cchHHHHHHHHHHcCCCCCCCceeeccccchhH
Q 015003 276 ALELGLQVIAKIRGFADAAQAPEWF-----T----------------TAPSLAIPKAIANAGLEASQIDYYEINEAFSVV 334 (414)
Q Consensus 276 a~~~~~~~~~~i~g~~~~~~~~~~~-----~----------------~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~ 334 (414)
+...+........+........... . ....++++++|+++|++++|||+|.+|+++...
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i 896 (979)
T 3tsy_A 817 ISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAI 896 (979)
T ss_dssp SSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHH
T ss_pred ccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHH
Confidence 4333333333333333322111000 0 013578999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcCCCC-CccccCCCccchHHHHHHHHHHHHHhcC-C------CeeEEeecccccceeeEEEEEecc
Q 015003 335 AIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKK-G------KYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 335 ~~~~~e~lGl~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~ql~~~~-~------~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
...+.+.||++++++..+- ....+||+..+|-.+.+.++...++.+. . +.++...+|+|.++.+++|+..+.
T Consensus 897 ~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~ 976 (979)
T 3tsy_A 897 LDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPM 976 (979)
T ss_dssp HHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBC
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhccc
Confidence 9999999999999876531 1345899999999999998887654321 1 234888888888999999998765
Q ss_pred e
Q 015003 407 V 407 (414)
Q Consensus 407 ~ 407 (414)
+
T Consensus 977 ~ 977 (979)
T 3tsy_A 977 V 977 (979)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=237.26 Aligned_cols=279 Identities=15% Similarity=0.151 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHHcCC-Cccc----cC----eEEEEeecCCC------------------------CCCcHHHHHHHH
Q 015003 37 ATKLGSIAIECALKRANV-KPLL----VQ----EVFFGNVLSAN------------------------LGQAPARQAALG 83 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi-~~~~----Id----~vi~g~~~~~~------------------------~~~~~a~~va~~ 83 (414)
...|+++++.+||++||+ +|.+ |+ .+++|+..+.+ .....+.+++..
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 456899999999999999 4777 44 45566553320 012256678884
Q ss_pred -CCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 84 -AGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 84 -lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
||+. +|+++++++|+|++.||+.|+..|++|++|++||+|+|.++. .....
T Consensus 1291 ~lgl~--GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~--~~~~~------------------------ 1342 (1887)
T 2uv8_A 1291 LISSS--GPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE--EGSFE------------------------ 1342 (1887)
T ss_dssp TTCCC--SCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH--HHHHH------------------------
T ss_pred HcCCc--cceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHH------------------------
Confidence 9994 799999999999999999999999999999999999998753 11100
Q ss_pred ccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhc
Q 015003 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (414)
Q Consensus 163 ~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 242 (414)
+...+.+.+..++++ ....++..|+| |+.+
T Consensus 1343 -------------f~~m~als~~~~e~~---------------------~g~~p~~~~RP---fd~~------------- 1372 (1887)
T 2uv8_A 1343 -------------FGNMKATSNTLEEFE---------------------HGRTPAEMSRP---ATTT------------- 1372 (1887)
T ss_dssp -------------HHHTTCBCCHHHHHH---------------------TTCCGGGSCCT---TBTT-------------
T ss_pred -------------HHHhhhhccchhhhc---------------------ccCCCccCcCC---Cccc-------------
Confidence 011111111111111 00112456777 6555
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc----c----------------c
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----T----------------T 302 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~----------------~ 302 (414)
++|++ ++||++++||++.+.|+++|.++++.|.|++.+++..... . .
T Consensus 1373 ------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~p 1439 (1887)
T 2uv8_A 1373 ------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYA 1439 (1887)
T ss_dssp ------CCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSC
T ss_pred ------CCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCC
Confidence 77887 7999999999999999999999999999999988743110 0 0
Q ss_pred c-----------------------------------------------------------------------------hH
Q 015003 303 A-----------------------------------------------------------------------------PS 305 (414)
Q Consensus 303 ~-----------------------------------------------------------------------------~~ 305 (414)
. ..
T Consensus 1440 s~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~ 1519 (1887)
T 2uv8_A 1440 SPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRI 1519 (1887)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSS
T ss_pred CcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHH
Confidence 0 03
Q ss_pred HHHHHHHHHcCCCCCCCceeeccccchhH-----HHHH---HHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHH
Q 015003 306 LAIPKAIANAGLEASQIDYYEINEAFSVV-----AIAN---QKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGV 376 (414)
Q Consensus 306 ~a~~~al~~aGl~~~DId~~~~hd~~~~~-----~~~~---~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q 376 (414)
.+++++|+++|++++|||++++|.+++.. ...+ ...+|-.. .++.+...|..+|||.||+|+.+++.++++
T Consensus 1520 ~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~ 1599 (1887)
T 2uv8_A 1520 APLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQI 1599 (1887)
T ss_dssp CHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHH
Confidence 68999999999999999999999999932 1112 23334432 357777778889999999999999999999
Q ss_pred HHhc-------------------------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 377 LRHK-------------------------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 377 l~~~-------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
|+.+ ..++.++++++.||+++.+||+..+.
T Consensus 1600 L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~~ 1660 (1887)
T 2uv8_A 1600 LNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDY 1660 (1887)
T ss_dssp HTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTHH
T ss_pred HHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCCc
Confidence 9864 12456778889999999999987654
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-24 Score=211.78 Aligned_cols=252 Identities=14% Similarity=0.081 Sum_probs=189.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcc-eeeEccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVV-CTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~-~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|+++++||.++++++++ ...|..+..++..||+++.++ +++++++|+++++||..|..+|+
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~ 202 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE 202 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998887 446778899999999975453 89999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|.++.. +.. |.
T Consensus 203 ~G~~~~vLvvg~E~~s~~-~~~-------------------------~~------------------------------- 225 (413)
T 1xes_A 203 NNRGARVLVICSETTAVT-FRG-------------------------PS------------------------------- 225 (413)
T ss_dssp TSTTCCEEEEEEECTTTT-CCC-------------------------CC-------------------------------
T ss_pred cCCCCEEEEEEehhhhhh-hcC-------------------------CC-------------------------------
Confidence 999999999999998751 000 00
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
. ++ ++ ....+..+||||+|+||+..+
T Consensus 226 --------d-----------------~~---~~--------------------------~~~~~~lfGDGA~A~vl~~~~ 251 (413)
T 1xes_A 226 --------E-----------------TH---LD--------------------------SLVGQALFGDGASALIVGADP 251 (413)
T ss_dssp --------T-----------------TC---HH--------------------------HHHHHHHBCCEEEEEEEESSC
T ss_pred --------c-----------------cc---hh--------------------------hcccceeEecccEEEEEecCC
Confidence 0 00 00 000112279999999998754
Q ss_pred HHHHcCC-cceEEEEEEEEeec-CC-Cc-------------cc--------cchHHHHHHHHHHcCCC-CCCCceeeccc
Q 015003 275 KALELGL-QVIAKIRGFADAAQ-AP-EW-------------FT--------TAPSLAIPKAIANAGLE-ASQIDYYEINE 329 (414)
Q Consensus 275 ~a~~~~~-~~~~~i~g~~~~~~-~~-~~-------------~~--------~~~~~a~~~al~~aGl~-~~DId~~~~hd 329 (414)
.. +. .+..++.+.+.... .. .. +. ....++++++|+++|++ .+|| ++.+|+
T Consensus 252 ~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq 327 (413)
T 1xes_A 252 IP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHP 327 (413)
T ss_dssp CT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECC
T ss_pred Cc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECC
Confidence 21 11 11234555443211 00 00 00 11246888999999998 8888 799999
Q ss_pred cchhHHHHHHHHcCCCCCCcCCC-CCccccCCCccchHHHHHHHHHHHHHhcCC--------CeeEEeecccccceeeEE
Q 015003 330 AFSVVAIANQKLLGLDPEQVNAH-GGAVSLGHPLGCSGARILVTLLGVLRHKKG--------KYGVGGICNGGGGASALV 400 (414)
Q Consensus 330 ~~~~~~~~~~e~lGl~~~~vn~~-Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~--------~~~l~~~~~~gg~~~a~v 400 (414)
.+......+.+.||++++++..+ -.+..+||+..++..+.+.+++++-+ +.| ++.+...++.|.++.+++
T Consensus 328 ~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~l 406 (413)
T 1xes_A 328 GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVV 406 (413)
T ss_dssp SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEE
Confidence 99999999999999999987542 11356899999999999999988766 444 788888888888999999
Q ss_pred EEEe
Q 015003 401 LELM 404 (414)
Q Consensus 401 l~~~ 404 (414)
|+..
T Consensus 407 l~~~ 410 (413)
T 1xes_A 407 LKSV 410 (413)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9875
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=213.25 Aligned_cols=257 Identities=17% Similarity=0.175 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHHHc-
Q 015003 38 TKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQL- 115 (414)
Q Consensus 38 ~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I~s- 115 (414)
.+|+.+|+++||+++|++++|||.||+++++ ++..|..+.+++..||+++....+++ +++|+++++||..|..+|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence 5999999999999999999999999999887 56788999999999999854448999 79999999999999999997
Q ss_pred ---CCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHH
Q 015003 116 ---GINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192 (414)
Q Consensus 116 ---G~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~ 192 (414)
|.+++|||+++|.++.. +.... +.+.
T Consensus 190 ~~~G~~~~vLVvg~E~~S~~-~~~~~------------------------------------------------~~~~-- 218 (465)
T 3e1h_A 190 TARGKPARILVLALEVSTTM-VRSEL------------------------------------------------ESID-- 218 (465)
T ss_dssp HHTTCCCEEEEEEEECCGGG-HHHHH------------------------------------------------HHHH--
T ss_pred cccCCCCEEEEEEEeecchh-cCccc------------------------------------------------cccc--
Confidence 99999999999998751 11000 0000
Q ss_pred hHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeC
Q 015003 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVS 272 (414)
Q Consensus 193 ~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s 272 (414)
.+. . .+..+.++||||+|+||+.
T Consensus 219 -------~~~-----------------------------------------------~---d~~t~~LFGDGAaAvVl~~ 241 (465)
T 3e1h_A 219 -------ALQ-----------------------------------------------E---TRIGIALFSDCASAVILSN 241 (465)
T ss_dssp -------HHT-----------------------------------------------C---CCCHHHHBCCEEEEEEEEC
T ss_pred -------ccc-----------------------------------------------c---ccccccccccceeEEEEEc
Confidence 000 0 0112344899999999997
Q ss_pred HHHHHHcCCcceEEEEEEEEeecC--------------------CCccc---cchHHHHHHHHHH-------cCCCCCCC
Q 015003 273 GVKALELGLQVIAKIRGFADAAQA--------------------PEWFT---TAPSLAIPKAIAN-------AGLEASQI 322 (414)
Q Consensus 273 ~~~a~~~~~~~~~~i~g~~~~~~~--------------------~~~~~---~~~~~a~~~al~~-------aGl~~~DI 322 (414)
.+... ....+...+.+....... +..+. ....+.++++|++ +|++++||
T Consensus 242 ~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DI 320 (465)
T 3e1h_A 242 GIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADF 320 (465)
T ss_dssp CTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGS
T ss_pred cCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHc
Confidence 53210 001222345554332210 00000 1124678888887 67999999
Q ss_pred ceeeccccchhHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHH--HHhcCC----CeeEEeecccccc
Q 015003 323 DYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGV--LRHKKG----KYGVGGICNGGGG 395 (414)
Q Consensus 323 d~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~q--l~~~~~----~~~l~~~~~~gg~ 395 (414)
|++ +|+.+..+...+.+.||++++++..+-- ...+||+..+|-...+.++.++ -+.+.+ ++.+...++.|-+
T Consensus 321 d~~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~gfG~Glt 399 (465)
T 3e1h_A 321 DWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGIN 399 (465)
T ss_dssp EEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEEEETTTE
T ss_pred eEE-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEEEhHHHh
Confidence 988 9999999999999999999998744311 2346999999977777776654 111222 6778888888889
Q ss_pred eeeEEEEEec
Q 015003 396 ASALVLELMQ 405 (414)
Q Consensus 396 ~~a~vl~~~~ 405 (414)
+.+++|+...
T Consensus 400 ~~~~llr~~~ 409 (465)
T 3e1h_A 400 VEMCMLKRRM 409 (465)
T ss_dssp EEEEEEEECC
T ss_pred hhheeeEEec
Confidence 9999999865
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=236.57 Aligned_cols=279 Identities=17% Similarity=0.155 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCC-------C-----------------CCcHHHHHHH-
Q 015003 37 ATKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSAN-------L-----------------GQAPARQAAL- 82 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~-~~~----Id----~vi~g~~~~~~-------~-----------------~~~~a~~va~- 82 (414)
...|+++++.+||++|||+ |.+ |+ .+++|+..+.+ . ....+.+++.
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4568999999999999997 776 44 46777654430 0 0124668888
Q ss_pred HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccccccccc
Q 015003 83 GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDV 162 (414)
Q Consensus 83 ~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (414)
.||+. +|++++.++|+|++.+|+.|+..|++|++|++||+|+|.++. .....
T Consensus 1266 ~lg~~--GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~--~~~~~------------------------ 1317 (1878)
T 2uv9_A 1266 LLSST--GPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE--EGSYE------------------------ 1317 (1878)
T ss_dssp TCCCC--CCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH--HHHHH------------------------
T ss_pred hcCCC--CCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh--HHHHH------------------------
Confidence 49994 799999999999999999999999999999999999998653 11100
Q ss_pred ccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhc
Q 015003 163 YNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMK 242 (414)
Q Consensus 163 ~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 242 (414)
+...+.+.+..++++ ....++..|+| |+.+
T Consensus 1318 -------------f~~m~als~~~de~a---------------------~g~~p~~~~RP---fd~~------------- 1347 (1878)
T 2uv9_A 1318 -------------FANMGATSNAKEEFA---------------------RGREPGEMSRP---TSTT------------- 1347 (1878)
T ss_dssp -------------HHHHTCBCCHHHHHT---------------------TTCCTTSSCCS---SBTT-------------
T ss_pred -------------HHHhhhhccchhhhh---------------------cCCCcccCcCC---CccC-------------
Confidence 011111111111111 00113557777 6555
Q ss_pred CCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc----ccc---------------
Q 015003 243 LRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF----TTA--------------- 303 (414)
Q Consensus 243 ~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~----~~~--------------- 303 (414)
++|++ .+||++++||++.+.|+++|.++++.|.|++.+++..... +.+
T Consensus 1348 ------r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~ 1414 (1878)
T 2uv9_A 1348 ------RNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSP 1414 (1878)
T ss_dssp ------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCG
T ss_pred ------CCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCc
Confidence 77888 7999999999999999999999999999999988743110 000
Q ss_pred -----------------------------------------------------h--------------------------
Q 015003 304 -----------------------------------------------------P-------------------------- 304 (414)
Q Consensus 304 -----------------------------------------------------~-------------------------- 304 (414)
.
T Consensus 1415 ~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~ 1494 (1878)
T 2uv9_A 1415 LLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFW 1494 (1878)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred ccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 0
Q ss_pred -----HHHHHHHHHHcCCCCCCCceeeccccchhH-H-------HHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHH
Q 015003 305 -----SLAIPKAIANAGLEASQIDYYEINEAFSVV-A-------IANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARIL 370 (414)
Q Consensus 305 -----~~a~~~al~~aGl~~~DId~~~~hd~~~~~-~-------~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l 370 (414)
..+++++|+.+|++++|||++++|.+++.. . ......+|-.. .++.+...|..+|||.||+|+.++
T Consensus 1495 ~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~l 1574 (1878)
T 2uv9_A 1495 RRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWML 1574 (1878)
T ss_dssp TTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHH
T ss_pred ccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHH
Confidence 168999999999999999999999999942 1 11223334332 357777778889999999999999
Q ss_pred HHHHHHHHhc-------------------------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 371 VTLLGVLRHK-------------------------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 371 ~~~~~ql~~~-------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+.++++|+.+ ..++.+++++|.||+++.+||+..+.
T Consensus 1575 i~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~~ 1641 (1878)
T 2uv9_A 1575 NGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPKY 1641 (1878)
T ss_dssp HHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCCc
Confidence 9999999864 12456778899999999999997654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-24 Score=237.76 Aligned_cols=280 Identities=14% Similarity=0.146 Sum_probs=199.6
Q ss_pred CHHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCCC------------------------CCcHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVK-PLL----VQ----EVFFGNVLSANL------------------------GQAPARQAAL 82 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~-~~~----Id----~vi~g~~~~~~~------------------------~~~~a~~va~ 82 (414)
....|+.+++.+||++||++ |.+ |+ .+++|+..+.+. ....+.+++.
T Consensus 1011 P~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~ 1090 (1688)
T 2pff_A 1011 PITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1090 (1688)
T ss_dssp SSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHH
Confidence 34569999999999999997 766 34 355555443310 1124567887
Q ss_pred -HCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccc
Q 015003 83 -GAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWD 161 (414)
Q Consensus 83 -~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (414)
.||+. +|+++++++|+|++.||..|+.+|++|++|++||+|+|.++..++....
T Consensus 1091 ~~LGl~--GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa----------------------- 1145 (1688)
T 2pff_A 1091 LLISSS--GPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFG----------------------- 1145 (1688)
T ss_dssp SSCCCC--CCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTT-----------------------
T ss_pred HHcCCc--CCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHH-----------------------
Confidence 68984 7999999999999999999999999999999999999997653211100
Q ss_pred cccCCchHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHh
Q 015003 162 VYNDFGMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLM 241 (414)
Q Consensus 162 ~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (414)
.++.++ .+. ..+.. ...++..|+| |+.+
T Consensus 1146 -----~mgaLS--------~~~--------------------~e~a~----G~~Pd~~cRP---Fd~~------------ 1173 (1688)
T 2pff_A 1146 -----NMKATS--------NTL--------------------EEFEH----GRTPAEMSRP---ATTT------------ 1173 (1688)
T ss_dssp -----TTSCSC--------CTT--------------------TTTTS----SCCSSSSCCS---SSSS------------
T ss_pred -----hccccc--------cCh--------------------hhhhc----CCChhhccCc---CccC------------
Confidence 000000 000 00000 0113556777 5555
Q ss_pred cCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCCcc------cc-------------
Q 015003 242 KLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWF------TT------------- 302 (414)
Q Consensus 242 ~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~~~------~~------------- 302 (414)
++|++ ++|||+++||++.+.|+++|.++++.|.|++.+.+..... +.
T Consensus 1174 -------rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~ta 1239 (1688)
T 2pff_A 1174 -------RNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239 (1688)
T ss_dssp -------CCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSC
T ss_pred -------CCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCC
Confidence 67777 7999999999999999999999999999998887632110 00
Q ss_pred ------------------------------------------------------------------------------ch
Q 015003 303 ------------------------------------------------------------------------------AP 304 (414)
Q Consensus 303 ------------------------------------------------------------------------------~~ 304 (414)
..
T Consensus 1240 PSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~ 1319 (1688)
T 2pff_A 1240 ASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPR 1319 (1688)
T ss_dssp SSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTT
T ss_pred CCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHH
Confidence 00
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhH-----HHHHHHHc---CCCC-CCcCCCCCccccCCCccchHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLL---GLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLG 375 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~-----~~~~~e~l---Gl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ 375 (414)
..+++++|+++|++++|||+++.|.+++.. ...+.+.+ |-.. .++.+...|..+|||.||+|+.+++.+++
T Consensus 1320 ~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~ll 1399 (1688)
T 2pff_A 1320 IAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQ 1399 (1688)
T ss_dssp CCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHH
Confidence 367899999999999999999999888831 11112233 3322 35777777888999999999999999999
Q ss_pred HHHhc-------------------------------CCCeeEEeecccccceeeEEEEEecc
Q 015003 376 VLRHK-------------------------------KGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 376 ql~~~-------------------------------~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+|+.+ ..++.++++++.||+++.+||+..+.
T Consensus 1400 aL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~~ 1461 (1688)
T 2pff_A 1400 ILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDY 1461 (1688)
T ss_dssp HSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSSS
T ss_pred HHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCCc
Confidence 99864 11345677889999999999998665
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=209.20 Aligned_cols=254 Identities=14% Similarity=0.085 Sum_probs=189.8
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHH
Q 015003 24 PMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGM 103 (414)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~ 103 (414)
++.++.-..++.+..+|+.+|+++||++ +++++||.+++|+.++....+..+..++..||+++++++++++++|+|++
T Consensus 38 Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~ 115 (396)
T 1xpm_A 38 GQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAAT 115 (396)
T ss_dssp CCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHH
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHH
Confidence 3333332335689999999999999998 78999999999998887777889999999999976689999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCH
Q 015003 104 KAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITR 183 (414)
Q Consensus 104 ~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 183 (414)
.||..|..+|++|.+++|||+|+|. +... .
T Consensus 116 ~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~--~----------------------------------------------- 145 (396)
T 1xpm_A 116 PAIQLAKDYLATRPNEKVLVIATDT-ARYG--L----------------------------------------------- 145 (396)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEEEE-ECCC--T-----------------------------------------------
T ss_pred HHHHHHHHHHHcCCCCEEEEEeehh-hccc--c-----------------------------------------------
Confidence 9999999999999999999999997 3200 0
Q ss_pred HHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccC
Q 015003 184 DEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISD 263 (414)
Q Consensus 184 ~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~D 263 (414)
+. +++++ +||
T Consensus 146 -------------------------------------------~~--------------------~~~~~-------~Gd 155 (396)
T 1xpm_A 146 -------------------------------------------NS--------------------GGEPT-------QGA 155 (396)
T ss_dssp -------------------------------------------TC--------------------SSGGG-------CEE
T ss_pred -------------------------------------------CC--------------------CCCcc-------ccc
Confidence 00 11123 799
Q ss_pred ceeEEEEeCHHHHHHcCCcceEEEEEEEEee-c-----CCCc------ccc--------chHHHHHHHHHHcCCCCCCCc
Q 015003 264 GAAALVLVSGVKALELGLQVIAKIRGFADAA-Q-----APEW------FTT--------APSLAIPKAIANAGLEASQID 323 (414)
Q Consensus 264 GAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~-~-----~~~~------~~~--------~~~~a~~~al~~aGl~~~DId 323 (414)
||+|+||++.+ .++....+.+... + .|.. .+. ...++++++|+++|++++|||
T Consensus 156 GA~A~vl~~~~-------~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did 228 (396)
T 1xpm_A 156 GAVAMVIAHNP-------SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFA 228 (396)
T ss_dssp EEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS
T ss_pred ceEEEEeccCC-------ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999998642 2333333333222 1 1111 010 135789999999999999999
Q ss_pred eeeccccchhHHHHHHHHc-----CCCCCCcCCC-----CCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccc
Q 015003 324 YYEINEAFSVVAIANQKLL-----GLDPEQVNAH-----GGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGG 393 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~l-----Gl~~~~vn~~-----Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~g 393 (414)
+|.+|+++..+.....+.| +++++++... --...+||+..+|-...+.+++.+-+.+.|++.+..++|.|
T Consensus 229 ~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG 308 (396)
T 1xpm_A 229 SLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSG 308 (396)
T ss_dssp EEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETT
T ss_pred EEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcc
Confidence 9999999999888888887 6665433100 00245899999999888888887644456788888777777
Q ss_pred cceeeEEEEEecc
Q 015003 394 GGASALVLELMQA 406 (414)
Q Consensus 394 g~~~a~vl~~~~~ 406 (414)
-+...++++..+.
T Consensus 309 ~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 309 SVGEFYSATLVEG 321 (396)
T ss_dssp TEEEEEEEEECTT
T ss_pred hhheEEEEEEccc
Confidence 6777788887765
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-23 Score=199.59 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=176.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHH
Q 015003 35 VSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 35 ~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~ 114 (414)
....+|+.+|+++||+++|++++|||.+++++.+++ ...+..++..|+ .|.++++++|+|++++|..|..+|+
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q---~~~A~~va~~Lg----ipafdV~~ACsg~~~AL~~Aa~~I~ 125 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ---NVTANYVARHLK----IPFLCLFGACSTSMESIAISSALID 125 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS---STTHHHHHHHHC----CCEEEBCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc---hhHHHHHHHHhC----CCEEEecChhHHHHHHHHHHHHHHh
Confidence 466889999999999999999999999999998873 237778888885 4799999999999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.+++|||+|+|+++..+..+..
T Consensus 126 sG~~~~VLVVGaE~~S~aerq~r~-------------------------------------------------------- 149 (347)
T 3lma_A 126 GGFAKRALAATSSHNATAERQFRY-------------------------------------------------------- 149 (347)
T ss_dssp TTSCSEEEEEEEECGGGTTCCC----------------------------------------------------------
T ss_pred cCCCCEEEEEEeccccchhhhccC--------------------------------------------------------
Confidence 999999999999999874211100
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
|. ++-..+|. ....++|||+|+||+...
T Consensus 150 -----------------p~-------------------------e~g~q~p~----------ta~~t~dGAGA~VL~~~g 177 (347)
T 3lma_A 150 -----------------PT-------------------------EYGGQKPG----------TATSTVTGSGAVVLSQQP 177 (347)
T ss_dssp ------------------------------------------------------------------CCCEEEEEEEESSC
T ss_pred -----------------cc-------------------------hhcccCCc----------hhcEEccceeEEEEEecC
Confidence 00 00000010 111147999999999642
Q ss_pred HHHHcCCcceEEEEEEEEee--c----CCCcccc----chHHHHHHHHHHcCCCCCCCceee---ccccchhHHHHHHHH
Q 015003 275 KALELGLQVIAKIRGFADAA--Q----APEWFTT----APSLAIPKAIANAGLEASQIDYYE---INEAFSVVAIANQKL 341 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~--~----~~~~~~~----~~~~a~~~al~~aGl~~~DId~~~---~hd~~~~~~~~~~e~ 341 (414)
.. .+|++..... + ++..++. ...+++++.|+++|++++|+|+|. +|+.+......++++
T Consensus 178 ------~~--p~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~ 249 (347)
T 3lma_A 178 ------GG--IKITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKE 249 (347)
T ss_dssp ------CS--EEEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHH
T ss_pred ------CC--CceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHH
Confidence 12 2444443221 1 2233331 234678999999999999999999 778888888889999
Q ss_pred cCCCCCCcCCCCCccccCCC-c--------cchHHHHHHHHHHHHHhcCCCeeEEeecccccc-------------eeeE
Q 015003 342 LGLDPEQVNAHGGAVSLGHP-L--------GCSGARILVTLLGVLRHKKGKYGVGGICNGGGG-------------ASAL 399 (414)
Q Consensus 342 lGl~~~~vn~~Gg~~~~Gh~-~--------gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~-------------~~a~ 399 (414)
+|++.++...+=|..-|+.. . |++....-...+.+|+.+..+|-|.+..+..-+ .-++
T Consensus 250 ~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~~ril~~~tGalls~~~~~q~~sip~iah~v 329 (347)
T 3lma_A 250 EGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGRLNRVLVVATGALLSPTIIQQKESIPCIAHGV 329 (347)
T ss_dssp TTCCCGGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTSCSEEEEEEEEECCCHHHHHTTCCCCEEEEEE
T ss_pred cCCChhHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCcccEEEEEecccccCcchhccCCccChhhEEE
Confidence 99998766555445555532 2 667677777788899988888877765554431 3467
Q ss_pred EEEEecc
Q 015003 400 VLELMQA 406 (414)
Q Consensus 400 vl~~~~~ 406 (414)
++|..++
T Consensus 330 ~~e~~~~ 336 (347)
T 3lma_A 330 VFERAER 336 (347)
T ss_dssp EEEEC--
T ss_pred EEEeecc
Confidence 8887665
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=204.14 Aligned_cols=244 Identities=15% Similarity=0.096 Sum_probs=182.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchHHHHHHHHH
Q 015003 31 SLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAA 110 (414)
Q Consensus 31 ~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~~~al~~A~ 110 (414)
..++++..+|+.+|+++||++++ +++||.|++++.+++...|..+..++..||+++.+++++++++|++++.||..|.
T Consensus 50 ~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~ 127 (388)
T 3v4n_A 50 NPISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAK 127 (388)
T ss_dssp CCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHH
Confidence 34578999999999999999997 9999999999999888788999999999999866899999999999999999999
Q ss_pred HHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHH
Q 015003 111 QSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYA 190 (414)
Q Consensus 111 ~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a 190 (414)
.+|++|.+++|||+++|.++...
T Consensus 128 ~~i~sg~~~~vLVvg~e~~s~~~--------------------------------------------------------- 150 (388)
T 3v4n_A 128 NHVALHPDKKVLVVAADIAKYGL--------------------------------------------------------- 150 (388)
T ss_dssp HHHHHCTTCEEEEEEEEEECCCT---------------------------------------------------------
T ss_pred HHHhcCCCCEEEEEEehhhcccC---------------------------------------------------------
Confidence 99999999999999999987510
Q ss_pred HHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEE
Q 015003 191 IRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVL 270 (414)
Q Consensus 191 ~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL 270 (414)
+. . ++..+||||+|+||
T Consensus 151 ------------------------------------~~--------------------~-------~~~lfGDGA~A~ll 167 (388)
T 3v4n_A 151 ------------------------------------NS--------------------G-------GEPTQGAGAVAMLV 167 (388)
T ss_dssp ------------------------------------TC--------------------T-------TGGGCEEEEEEEEE
T ss_pred ------------------------------------CC--------------------C-------CCCccccceeEEEe
Confidence 00 0 01127999999999
Q ss_pred eCHHHHHHcCCcceEEEE--EEEEeec-----CCC--ccc------------cchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 271 VSGVKALELGLQVIAKIR--GFADAAQ-----APE--WFT------------TAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 271 ~s~~~a~~~~~~~~~~i~--g~~~~~~-----~~~--~~~------------~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
+..+. + ..+. ..+...+ .|. .+. .....+++++++++|++++|||++.+|+
T Consensus 168 ~~~~~-------i-l~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 168 SSEPR-------I-LALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp EESCS-------S-EEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred ecCCC-------c-eEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 87431 1 1111 1111111 111 000 1124688999999999999999999999
Q ss_pred cchhHH------------HHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHH-HHhcCCCeeEEeecccccce
Q 015003 330 AFSVVA------------IANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV-LRHKKGKYGVGGICNGGGGA 396 (414)
Q Consensus 330 ~~~~~~------------~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q-l~~~~~~~~l~~~~~~gg~~ 396 (414)
+|..+. ....+.|+++.++.... ...+||+..+|-...+.+++.+ -+.+.|++.+..++|.|-+.
T Consensus 240 p~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~a 317 (388)
T 3v4n_A 240 PYTKMGKKALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVA 317 (388)
T ss_dssp SSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEE
T ss_pred CcchHHHHHHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCccee
Confidence 775532 23466777777765543 5668999999988888888776 34456777777666666666
Q ss_pred eeEEEEEecc
Q 015003 397 SALVLELMQA 406 (414)
Q Consensus 397 ~a~vl~~~~~ 406 (414)
....++..+.
T Consensus 318 e~~~~~v~~~ 327 (388)
T 3v4n_A 318 EFFTGELVAG 327 (388)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEEccC
Confidence 5555555444
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=197.24 Aligned_cols=248 Identities=14% Similarity=0.103 Sum_probs=186.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCC--CCCcceeeEccCCchHHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI--PNSVVCTTINKVCSSGMKAVMLAA 110 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl--~~~~~~~~v~~aC~s~~~al~~A~ 110 (414)
++++..+|+.+|+++||+++|+++++||.+++++.++....+..+..++..||+ ++++++++++++|++++.||..|.
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~ 127 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCV 127 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHH
Confidence 468999999999999999999999999999999988877788999999999998 446899999999999999999999
Q ss_pred HHHHcCCC--CeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHH
Q 015003 111 QSIQLGIN--DIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDS 188 (414)
Q Consensus 111 ~~I~sG~~--~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~ 188 (414)
.+|++|.+ ++|||+|+|.++..+ +
T Consensus 128 ~~I~sg~~~~~~vLVvg~e~~~~~~----~-------------------------------------------------- 153 (450)
T 2f82_A 128 NWVESNSWDGRYGLVICTDSAVYAE----G-------------------------------------------------- 153 (450)
T ss_dssp HHHHSTTCCSCEEEEEEEEEECCSS----S--------------------------------------------------
T ss_pred HHHHcCCCcCCeEEEEEeeeccccC----C--------------------------------------------------
Confidence 99999997 999999999864200 0
Q ss_pred HHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEE
Q 015003 189 YAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAAL 268 (414)
Q Consensus 189 ~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~ 268 (414)
...++ +||||+|+
T Consensus 154 ------------------------------------------------------------~~~~~-------fGDGA~A~ 166 (450)
T 2f82_A 154 ------------------------------------------------------------PARPT-------GGAAAIAM 166 (450)
T ss_dssp ------------------------------------------------------------TTGGG-------CEEEEEEE
T ss_pred ------------------------------------------------------------CCCcc-------cccceEEE
Confidence 00122 79999999
Q ss_pred EEeCHHHHHHcCCcceEEEEEEEEee----cCCC---cc--cc----------chHHHHHHHHH------HcCCCCCCCc
Q 015003 269 VLVSGVKALELGLQVIAKIRGFADAA----QAPE---WF--TT----------APSLAIPKAIA------NAGLEASQID 323 (414)
Q Consensus 269 vL~s~~~a~~~~~~~~~~i~g~~~~~----~~~~---~~--~~----------~~~~a~~~al~------~aGl~~~DId 323 (414)
||+..+. . .......+..... ..+. .+ .. ....+++.+++ ++|++++|||
T Consensus 167 ll~~~~~---~--~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~~did 241 (450)
T 2f82_A 167 LIGPDAP---I--VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDAD 241 (450)
T ss_dssp EEESSCS---E--EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGCS
T ss_pred EeccCCc---e--EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCChhhcC
Confidence 9986531 0 1111112222211 0111 00 01 12357777776 7899999999
Q ss_pred eeeccccchhHHHHHHHHcCC------------------CC---------------C-------------CcCCCCC-cc
Q 015003 324 YYEINEAFSVVAIANQKLLGL------------------DP---------------E-------------QVNAHGG-AV 356 (414)
Q Consensus 324 ~~~~hd~~~~~~~~~~e~lGl------------------~~---------------~-------------~vn~~Gg-~~ 356 (414)
+|.+|+++..+.....+.|++ ++ + ++.++-- ..
T Consensus 242 ~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~ 321 (450)
T 2f82_A 242 YFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPK 321 (450)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHH
T ss_pred EEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHH
Confidence 999999999999999999983 22 1 1111100 23
Q ss_pred ccCCCccchHHHHHHHHHHHHH-hcCCCeeEEeecccccceeeEEEEEecc
Q 015003 357 SLGHPLGCSGARILVTLLGVLR-HKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~ql~-~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
.+||+..+|-...+.+++.+-+ ...|++.+..++|.|-++.+++++..+.
T Consensus 322 ~~GN~~saSi~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 322 QVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp HHCCCGGGHHHHHHHHHHHHHGGGCTTCEEEEEEEETTTEEEEEEEEECCC
T ss_pred hcCchHHHHHHHHHHHHHHhCccCCCCCEEEEEeecCCcccEEEEEEEeCC
Confidence 5899999999999999888753 5578888887888887888888887654
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=231.80 Aligned_cols=262 Identities=20% Similarity=0.215 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-----C--------------CCcHHHHHHHHCCCCCCcceeeE
Q 015003 39 KLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN-----L--------------GQAPARQAALGAGIPNSVVCTTI 95 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~-----~--------------~~~~a~~va~~lgl~~~~~~~~v 95 (414)
.|+.+++.+||+|||+++++++ .|++|+...++ . ....+..|+..+|+ ++|+++|
T Consensus 80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~tv 157 (2512)
T 2vz8_A 80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSITI 157 (2512)
T ss_dssp HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEEE
T ss_pred HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCceee
Confidence 4899999999999999987765 58888765432 0 11267889999999 4899999
Q ss_pred ccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHH
Q 015003 96 NKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEIC 175 (414)
Q Consensus 96 ~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 175 (414)
+++|+|++.||++|++.|++|++|.+||+|++.+.. |.....
T Consensus 158 ~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~~~~------------------------------------- 199 (2512)
T 2vz8_A 158 DTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNSSLQ------------------------------------- 199 (2512)
T ss_dssp ECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHHHHH-------------------------------------
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHHHHH-------------------------------------
Confidence 999999999999999999999999999999999876 432211
Q ss_pred HHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCcccc
Q 015003 176 ANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTA 255 (414)
Q Consensus 176 ~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (414)
+ .+.+.++ +++.|+| ||.+ ++|+.
T Consensus 200 -------------~-----------~~~~~ls--------~~g~c~~---Fd~~-------------------adG~~-- 223 (2512)
T 2vz8_A 200 -------------F-----------MKLGMLS--------QDGTCRS---FDAE-------------------GTGYC-- 223 (2512)
T ss_dssp -------------H-----------HHTTCBC--------TTCSCCS---SSTT-------------------CCCBC--
T ss_pred -------------H-----------ccCCCCC--------CCCCCCC---CCCC-------------------CCCcc--
Confidence 0 0001111 2567888 7877 78898
Q ss_pred CCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeecCCC--c----cccchHHHHHHHHHHcCCCCCCCceeeccc
Q 015003 256 GNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPE--W----FTTAPSLAIPKAIANAGLEASQIDYYEINE 329 (414)
Q Consensus 256 ~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~~~~--~----~~~~~~~a~~~al~~aGl~~~DId~~~~hd 329 (414)
.|||++++||.+.+.|+ ++++.|+|++.+.|... . .+.+..++++++|++||++++||||||.|-
T Consensus 224 -----~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHG 294 (2512)
T 2vz8_A 224 -----RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHG 294 (2512)
T ss_dssp -----BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCC
T ss_pred -----eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeec
Confidence 69999999999987764 58999999999988632 1 123457899999999999999999999998
Q ss_pred cchhH-----HHHHHHHcCCC-CCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcC----------------------
Q 015003 330 AFSVV-----AIANQKLLGLD-PEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKK---------------------- 381 (414)
Q Consensus 330 ~~~~~-----~~~~~e~lGl~-~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~---------------------- 381 (414)
..+.. ...+.+.||-. ..++.++.-|..+||+.+|+|+..++.++++|+.+-
T Consensus 295 TgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~ 374 (2512)
T 2vz8_A 295 TGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRL 374 (2512)
T ss_dssp CCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSC
T ss_pred CCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCce
Confidence 88753 23345567643 246778888999999999999999999999998640
Q ss_pred ----------CCeeEEeecccccceeeEEEEEec
Q 015003 382 ----------GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 382 ----------~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.++..+.+++.||+|+.+|||...
T Consensus 375 ~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 375 QVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp EECCSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred EecCCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 124567789999999999999754
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=190.22 Aligned_cols=247 Identities=14% Similarity=0.084 Sum_probs=178.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHH---CCCCCCcceeeEccCCchHHHHHHHH
Q 015003 33 SSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALG---AGIPNSVVCTTINKVCSSGMKAVMLA 109 (414)
Q Consensus 33 ~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~---lgl~~~~~~~~v~~aC~s~~~al~~A 109 (414)
++++..+|+.+|+++||+++|+++++||.+++++.++....+..+..++.. +|++ +++++++.++|++++.||..|
T Consensus 69 ~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC~gg~~AL~~A 147 (478)
T 2p8u_A 69 DREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTTNACYGGTAAVFNA 147 (478)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-CceEEEEcchhHHHHHHHHHH
Confidence 467999999999999999999999999999999998877788899999944 5555 689999999999999999999
Q ss_pred HHHHHcCC--CCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHH
Q 015003 110 AQSIQLGI--NDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187 (414)
Q Consensus 110 ~~~I~sG~--~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~ 187 (414)
..+|++|. +++|||+++|...-.
T Consensus 148 ~~~i~sg~~~~~~aLVV~~Eia~~~------------------------------------------------------- 172 (478)
T 2p8u_A 148 VNWIESSSWDGRYALVVAGDIAVYA------------------------------------------------------- 172 (478)
T ss_dssp HHHHTSTTCCSCEEEEEEEEEECCC-------------------------------------------------------
T ss_pred HHHHHcCCccCCEEEEEEeeeeccc-------------------------------------------------------
Confidence 99999999 999999999952110
Q ss_pred HHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeE
Q 015003 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAA 267 (414)
Q Consensus 188 ~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA 267 (414)
+ .++ +..+||||+|
T Consensus 173 ------------------------~------------------------------------~~~------~~~fGdGA~A 186 (478)
T 2p8u_A 173 ------------------------T------------------------------------GNA------RPTGGVGAVA 186 (478)
T ss_dssp ------------------------S------------------------------------STT------GGGCEEEEEE
T ss_pred ------------------------C------------------------------------CCC------CCcccceeEE
Confidence 0 000 1127999999
Q ss_pred EEEeCHHHHHHcCCcceEEEEEEEEe-e-c--CCC---cc--ccc-------------hHHHHHHHHH--------HcCC
Q 015003 268 LVLVSGVKALELGLQVIAKIRGFADA-A-Q--APE---WF--TTA-------------PSLAIPKAIA--------NAGL 317 (414)
Q Consensus 268 ~vL~s~~~a~~~~~~~~~~i~g~~~~-~-~--~~~---~~--~~~-------------~~~a~~~al~--------~aGl 317 (414)
+||+..+.. .+... +.+.... . + .|. .. ..+ ..+.+++.++ ++|+
T Consensus 187 ~Ll~~~~~~-~l~~~----~~gs~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~ 261 (478)
T 2p8u_A 187 LLIGPNAPL-IFERG----LRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF 261 (478)
T ss_dssp EEEESSCSE-EECTT----CCEEEECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEEecCCCc-eEeec----cceecccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCC
Confidence 999865310 00000 0111100 0 0 111 00 000 0134556665 6799
Q ss_pred CCCCCceeeccccchhHHHHHHHHcC------------------------CCC---------C-------------CcCC
Q 015003 318 EASQIDYYEINEAFSVVAIANQKLLG------------------------LDP---------E-------------QVNA 351 (414)
Q Consensus 318 ~~~DId~~~~hd~~~~~~~~~~e~lG------------------------l~~---------~-------------~vn~ 351 (414)
+++|||++.+|+++..+.....+.|+ +++ + ++.+
T Consensus 262 ~~~did~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~ 341 (478)
T 2p8u_A 262 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKA 341 (478)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTG
T ss_pred ChHHcCEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHH
Confidence 99999999999999999999999998 433 2 2211
Q ss_pred CC-CccccCCCccchHHHHHHHHHHHHH--hcCCCeeEEeecccccceeeEEEEEecc
Q 015003 352 HG-GAVSLGHPLGCSGARILVTLLGVLR--HKKGKYGVGGICNGGGGASALVLELMQA 406 (414)
Q Consensus 352 ~G-g~~~~Gh~~gasG~~~l~~~~~ql~--~~~~~~~l~~~~~~gg~~~a~vl~~~~~ 406 (414)
+- ....+||+..+|-...+.+++.+-+ ...|++.+..+.|.|-++.+++++..+.
T Consensus 342 ~~~~~~~~GN~~saSi~l~L~~ll~~~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~ 399 (478)
T 2p8u_A 342 SLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQD 399 (478)
T ss_dssp GGHHHHHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHhCCccCCCCCEEEEEEEcchhhhEEEEEEEeCC
Confidence 21 1345899999998888888877643 3468888887788888888888887654
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.9e-18 Score=171.39 Aligned_cols=102 Identities=11% Similarity=-0.056 Sum_probs=87.7
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCC--CCcceeeEccCCchH
Q 015003 25 MGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIP--NSVVCTTINKVCSSG 102 (414)
Q Consensus 25 ~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~--~~~~~~~v~~aC~s~ 102 (414)
+.++.-..++++..+|+++|+++||+++|++|++||.|++++.+++...|..+..++..||+. +++.+|++.++|+++
T Consensus 42 i~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~ 121 (460)
T 2wya_A 42 QTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGG 121 (460)
T ss_dssp CCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhH
Confidence 334434456789999999999999999999999999999999999888899999999998642 257889999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEec
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGM 126 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~ 126 (414)
++||..|..+|++|.++.++++.+
T Consensus 122 ~~al~~A~~~i~~g~~~~~lvvv~ 145 (460)
T 2wya_A 122 TASLFNAANWMESSSWDGRYAMVV 145 (460)
T ss_dssp HHHHHHHHHHHTSTTCCSCEEEEE
T ss_pred HHHHHHHHHHHHhccccceEEEEE
Confidence 999999999999999876655533
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.21 Score=47.85 Aligned_cols=95 Identities=19% Similarity=0.201 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.+. +......-.+.+.||+.+.+. . .+ ..|++|.. .+..+...+
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~a-~-----di--~~~C~g~~~aL~~A~~~i 137 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAPA-Y-----DV--SAACAGYCYGVAQADALV 137 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSCE-E-----EE--ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCceE-E-----Ee--ecchhhHHHHHHHhhhhh
Confidence 3689999999999999999988732 233445566788999865321 1 12 12455544 455555556
Q ss_pred HhcCCCeeEEeec----------------ccccceeeEEEEEecc
Q 015003 378 RHKKGKYGVGGIC----------------NGGGGASALVLELMQA 406 (414)
Q Consensus 378 ~~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~~ 406 (414)
+.+..++.|+... ..|...++++|+..+.
T Consensus 138 ~~g~~~~~Lvv~~E~~s~~~d~~~~~~~~lfgDGA~A~vl~~~~~ 182 (350)
T 4ewp_A 138 RSGTARHVLVVGVERLSDVVDPTDRSISFLLGDGAGAVIVAASDE 182 (350)
T ss_dssp HTTSCSEEEEEEEEEGGGGCCTTCTTTGGGBCEEEEEEEEEEESS
T ss_pred hCCCccceeEeeeeeceecccccccccccccccchheeeeecccC
Confidence 6666677664431 2344557788877654
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=93.84 E-value=0.3 Score=46.24 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+.+.+. ..+ +..+++++..+..+...++
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v-~~aC~s~~~al~~A~~~i~ 128 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFA------FDI-SAACSGFVYALSMAEKLVL 128 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceE------EEe-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 2334556788899864221 112 2345666777777777788
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.|+.. ...|...+++||+..+.
T Consensus 129 ~g~~~~vLvvg~e~~s~~~~~~dr~~~~lfGDGA~A~vl~~~~~ 172 (321)
T 3il6_A 129 SGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAET 172 (321)
T ss_dssp TSSCCCEEEEEEECGGGGSCTTCTTTGGGBCCEEEEEEEEEESS
T ss_pred CCCCCEEEEEEEccccccCCccccccceeeccccEEEEEEEcCC
Confidence 76666655322 22444667888887653
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.49 E-value=0.37 Score=46.36 Aligned_cols=97 Identities=16% Similarity=0.081 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+++.... ..+ +..+++++..+..+...++
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~-----~~v-~~aC~s~~~al~~A~~~i~ 143 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLA-----LDI-NLGCSGYPQALWLGMNLIQ 143 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEE-----EEE-CCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccE-----Eee-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 22345667888998532111 112 3445677777888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.|+.. ...|...+++||+..+.
T Consensus 144 ~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGDGA~A~vl~~~~~ 187 (354)
T 4efi_A 144 TGAAKRVLLAVGDTISKMIDPTDRSTSLLFGDAGTMTALETSNG 187 (354)
T ss_dssp TTSCSEEEEEEEECGGGGCCTTCHHHHTTBCCEEEEEEEEECCS
T ss_pred CCCCCEEEEEEechhcccCCccccccccccccceeEEEEeecCC
Confidence 76666665332 12344567888887653
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.47 Score=45.03 Aligned_cols=95 Identities=22% Similarity=0.141 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+. ... +..+++|+..+..+...++
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~------~~v-~~~C~s~~~al~~A~~~i~ 134 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAIS------FDL-AAACTGFVYALSVADQFIR 134 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCEE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCccE------EEE-CCccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 2334556678899853221 112 2345666777777777788
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 135 ~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGDGA~A~vl~~~~ 177 (323)
T 3il3_A 135 AGKVKKALVIGSDLNSRKLDETDRSTVVLFGDGAGAVILEASE 177 (323)
T ss_dssp TTSCSEEEEEEEEEGGGSCCTTCTTTTTTBCEEEEEEEEEEES
T ss_pred CCCCCEEEEEEeeccccccCccccccccccccceEEEEEEEcC
Confidence 76666655332 1234456788888754
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.04 E-value=0.46 Score=45.14 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+++.... ... +..+++++..+..+...++
T Consensus 69 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~-----~~v-~~~C~s~~~al~~A~~~i~ 142 (333)
T 4dfe_A 69 AFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAA-----FDV-QAVCSGFAYAVATADSFIR 142 (333)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEE-----EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcE-----EEe-CcccHHHHHHHHHHHHHHH
Confidence 368999999999999999999875322 23345567888998532111 112 3445677777888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 143 ~g~~~~vLvvg~e~~s~~~~~~d~~~~~lfGDGA~A~vl~~~~ 185 (333)
T 4dfe_A 143 SGQHRTALVIGAETFSRILDFKDRTTCVLFGDGAGAVILQASD 185 (333)
T ss_dssp TTSCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEES
T ss_pred cCCCCEEEEEEeeccccccCcccccceeeeccccEEEEEEEcC
Confidence 76666655332 1234455788888765
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=92.49 E-value=0.52 Score=45.52 Aligned_cols=97 Identities=18% Similarity=0.072 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.+ .......+.+.||+.+..... .. +..+++|+..+..+...++
T Consensus 84 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~-----~v-~~~C~s~~~Al~~A~~~i~ 157 (365)
T 3gwa_A 84 AYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGAL-----DV-NLGCSGYVYGLSLAKGLVE 157 (365)
T ss_dssp HHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEE-----EE-ECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEE-----Ee-cccChHHHHHHHHHHHHHH
Confidence 368999999999999999999875321 233445678889987421111 12 2335677777888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
.+..++.|+.. ...|...+++||+..+.
T Consensus 158 ~g~~~~vLvvg~e~~s~~~~~~dr~~~~lfGDGAaA~vl~~~~~ 201 (365)
T 3gwa_A 158 TGAARCVLLLTADTYSKYLHPLDKSVRTLFGDGASATAVIAEHG 201 (365)
T ss_dssp TTSCSEEEEEEEECGGGGSCTTCHHHHTTBCCEEEEEEEEEECS
T ss_pred cCCCCEEEEEEEchhhccCCcccccccccccceeEEEEEEecCC
Confidence 76666665332 12444667888887653
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=92.13 E-value=0.81 Score=43.70 Aligned_cols=78 Identities=13% Similarity=0.038 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-... ......+.+.||+.+.-... .. +..+++++..+..+...++
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~-----~v-~~aC~s~~~al~~A~~~i~ 145 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTF-----DV-ANACLAFINGMDIAARMLE 145 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEE-----EC-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEE-----eE-CCcCHHHHHHHHHHHHHHH
Confidence 3689999999999999999998754222 23355667889986421111 12 2245677777888888888
Q ss_pred hcCCCeeEE
Q 015003 379 HKKGKYGVG 387 (414)
Q Consensus 379 ~~~~~~~l~ 387 (414)
.+..++.|+
T Consensus 146 ~g~~~~vLv 154 (345)
T 3s21_A 146 RGEIDYALV 154 (345)
T ss_dssp HTSCSEEEE
T ss_pred CCCCCEEEE
Confidence 766666653
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=91.98 E-value=0.27 Score=47.09 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc--------------ceeeEccCCchHHH-
Q 015003 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV--------------VCTTINKVCSSGMK- 104 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~--------------~~~~v~~aC~s~~~- 104 (414)
.+.+++.++|+|+|++|+|+|.++.|-... .+..+...+..++|++... +++.=.+||+.+..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v 285 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVV 285 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHH
Confidence 344556899999999999999999863221 2334566777788876421 11112345554443
Q ss_pred HHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 105 AVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 105 al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
--..-...++.|+.+++|+++.-..-+
T Consensus 286 ~~~~~~~~~~~g~~~ril~~~tGalls 312 (347)
T 3lma_A 286 TFAHIFKEIEAGRLNRVLVVATGALLS 312 (347)
T ss_dssp HHHTHHHHHHTTSCSEEEEEEEEECCC
T ss_pred HHHHHHHHHhcCcccEEEEEecccccC
Confidence 334455689999999999998887655
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=91.43 E-value=0.75 Score=42.87 Aligned_cols=95 Identities=18% Similarity=0.076 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+.. .. ...+++++..+..+...++
T Consensus 54 ~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~~~------~v-~~~C~s~~~al~~A~~~i~ 126 (309)
T 2ebd_A 54 ATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAF------DI-SAACSGFIYALDIADSFIK 126 (309)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCEEE------EE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCceEE------ec-CccchHHHHHHHHHHHHHH
Confidence 368899999999999999998875322 22244566788998752211 12 2446788888888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 127 ~g~~~~vlv~g~e~~s~~~~~~~~~~~~~~gdGaaA~vL~~~~ 169 (309)
T 2ebd_A 127 SGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSE 169 (309)
T ss_dssp TTSCSEEEEEEEEEGGGTCCTTCTTTTTTBCEEEEEEEEEECS
T ss_pred CCCCCEEEEEEecccccccCccchhhccccccccEEEEEEecC
Confidence 776666553321 123345678888765
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=91.42 E-value=0.53 Score=46.36 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||.+.+-. ........+.+.||+.+.-.... ..+..+++|+..+..+...++.+
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~-----v~~~~Cagg~~AL~~A~~~i~ag 216 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLP-----ATQWACVAGTRSLALAADLVAAD 216 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEEEE-----ESSCGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceEEE-----eeCCccHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999988532 23344566788999876311111 12444566676777777777776
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
..++.|
T Consensus 217 ~~~~vL 222 (413)
T 3v7i_A 217 PDRVVL 222 (413)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 666655
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=91.22 E-value=0.68 Score=45.23 Aligned_cols=94 Identities=21% Similarity=0.065 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccc-----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd-----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-. ........+.+.||+.. + ...+ +..+++++..+..+...++
T Consensus 121 a~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~-~------~~dv-~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 121 AVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG-F------AFDM-NVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS-E------EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC-e------EEEE-CCccHHHHHHHHHHHHHHH
Confidence 36899999999999999999987532 22334455678899831 1 1112 3345566667777777788
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 193 ~g~~~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~ 235 (392)
T 3led_A 193 GGSVDAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERAD 235 (392)
T ss_dssp TTSCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGG
T ss_pred CCCCCEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecC
Confidence 76666665332 2244456788888765
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=91.03 E-value=0.66 Score=50.77 Aligned_cols=97 Identities=20% Similarity=0.166 Sum_probs=64.7
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
..++++||+++|++++|||.+.+- .......-.+.+.||+........ .. +..+++|+..+..+...++.+
T Consensus 694 ~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~----~v-~~aCsg~~~Al~~A~~~i~sG 768 (979)
T 3tsy_A 694 KEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVM----LY-HQGCYAGGTVLRTAKDLAENN 768 (979)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE----EE-SCCTTHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEe----ee-ccccHhHHHHHHHHHHHHHhC
Confidence 358999999999999999998742 223334556688899865321010 01 234567777888888888877
Q ss_pred CCCeeEEeecc----------------------cccceeeEEEEEecc
Q 015003 381 KGKYGVGGICN----------------------GGGGASALVLELMQA 406 (414)
Q Consensus 381 ~~~~~l~~~~~----------------------~gg~~~a~vl~~~~~ 406 (414)
..++.|+...- .|...+++||+..+.
T Consensus 769 ~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~ 816 (979)
T 3tsy_A 769 AGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPD 816 (979)
T ss_dssp TTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred CCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCC
Confidence 77777654432 255667888887553
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=89.78 E-value=1.2 Score=41.79 Aligned_cols=94 Identities=14% Similarity=0.006 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+ .-+. ... ...+++++..+..+...++
T Consensus 54 a~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~~------~~v-~~aCas~~~al~~A~~~i~ 125 (322)
T 1ub7_A 54 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAFA------YDL-LAGCPGWIYALAQAHALVE 125 (322)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCEE------EEE-ECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCEE------Eee-CccchHHHHHHHHHHHHHH
Confidence 368899999999999999997764221 22234566788998 3221 112 2345777888888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 126 ~g~~~~vlv~g~e~~s~~~~~~d~~~~~~~GdGA~A~vL~~~~ 168 (322)
T 1ub7_A 126 AGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVR 168 (322)
T ss_dssp TTSCSEEEEEEEECGGGTSCTTCHHHHTTBCCEEEEEEEECCC
T ss_pred cCCCCEEEEEEechhccccChhhcccceeeccccEEEEEEecC
Confidence 776666654332 233345678888764
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=89.77 E-value=1.2 Score=42.13 Aligned_cols=95 Identities=20% Similarity=0.061 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+..-+. ... ...+++++..+..+...++
T Consensus 65 a~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aC~s~~~al~~A~~~i~ 137 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILG------FDL-SAGAAGFGYALGAAADMIR 137 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCcE------eee-ccccHHHHHHHHHHHHHHH
Confidence 368899999999999999998875322 2233456678899852121 112 2345777778888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 138 ~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~gDGA~A~vl~~~~ 180 (335)
T 1u6e_A 138 GGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGETP 180 (335)
T ss_dssp HTSCSSEEEEEEEECGGGCCTTCTTTTTTBCEEEEEEEEEECS
T ss_pred cCCCCEEEEEEEcccccccCccccccceEeccccEEEEEEecC
Confidence 776666554321 123345678888765
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=89.35 E-value=0.92 Score=45.35 Aligned_cols=77 Identities=22% Similarity=0.010 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh-
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH- 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~- 379 (414)
.+++++||+++|++++|||++.+-.+ .......+.+.||+.+...... ..+..+++|+..+..+...++.
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~d-----v~~~~Csgg~~AL~~A~~~i~a~ 189 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVL-----LHGIGCSGGLAALRTAANLCLGH 189 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEE-----ECSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEE-----ecCCcchHHHHHHHHHHHHHhcc
Confidence 57899999999999999999985432 3344566788999876431111 1123345555566666666653
Q ss_pred ---cCCCeeE
Q 015003 380 ---KKGKYGV 386 (414)
Q Consensus 380 ---~~~~~~l 386 (414)
+..++.|
T Consensus 190 ~~~G~~~~vL 199 (465)
T 3e1h_A 190 TARGKPARIL 199 (465)
T ss_dssp HHTTCCCEEE
T ss_pred cccCCCCEEE
Confidence 3345544
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=89.20 E-value=0.92 Score=44.15 Aligned_cols=77 Identities=22% Similarity=0.148 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++.+-.+ .......+.+.||+.+... ... -+..+++++..+..+...++.
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~------~~~~C~~~~~al~~A~~~i~s 174 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTML------HLNGCFAGCAALRLAKDLAEN 174 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEE------ECCGGGHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeE------ECchhHHHHHHHHHHHHHHhc
Confidence 58999999999999999999975322 3334556788899876321 111 134455666677777777776
Q ss_pred cCCCeeEE
Q 015003 380 KKGKYGVG 387 (414)
Q Consensus 380 ~~~~~~l~ 387 (414)
+..++.|+
T Consensus 175 g~~~~vLv 182 (387)
T 3oit_A 175 SRGARVLV 182 (387)
T ss_dssp STTCEEEE
T ss_pred CCCCEEEE
Confidence 66666553
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=89.06 E-value=1 Score=43.97 Aligned_cols=76 Identities=20% Similarity=0.102 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++.+-. ........+.+.||+.+... ... + +..+++++..+..+...++.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~-----v-~~~C~g~~~al~~A~~~i~s 180 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMI-----Y-SQACHMGAAMLRIAKDLAEN 180 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEE-----E-SCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeE-----E-cCccHHHHHHHHHHHHHHHc
Confidence 5899999999999999999987532 23344556788999876431 111 1 23345666667777777776
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 181 g~~~~vL 187 (393)
T 3ov2_A 181 NRGARVL 187 (393)
T ss_dssp STTCEEE
T ss_pred CCCCEEE
Confidence 6666655
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=89.01 E-value=0.97 Score=43.51 Aligned_cols=95 Identities=23% Similarity=0.117 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+ . ... +..+++++..+..+...++
T Consensus 78 a~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~----~~v-~~aC~s~~~Al~~A~~~i~ 150 (359)
T 3h78_A 78 MVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP--V----LDI-RAQASGLLYGLQMARGQIL 150 (359)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCC--E----EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc--E----EEE-CCHhHHHHHHHHHHHHHHH
Confidence 368999999999999999999885322 233456678899985322 1 112 2345666777777777787
Q ss_pred hcCCCeeEEee------------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI------------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~------------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. ...|...+++||+..+
T Consensus 151 sG~~~~vLvvg~e~~S~~~~~~d~~~~t~~lfGDGAaA~vl~~~~ 195 (359)
T 3h78_A 151 AGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGE 195 (359)
T ss_dssp TTSCSEEEEEEEEECGGGCCCSTTTHHHHTTBCEEEEEEEEECCS
T ss_pred CCCcCEEEEEEEchhcccCCcccccccccceecceeEEEEEEecC
Confidence 66566655322 1134456788888654
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=88.47 E-value=0.93 Score=42.86 Aligned_cols=83 Identities=18% Similarity=0.117 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE----ccCCchHHHHHHHHHHHHH
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI----NKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v----~~aC~s~~~al~~A~~~I~ 114 (414)
+...++++++|+++|++++|||.++.- ..+......+...||+++.....++ +..++|...+|..+ ++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H-----~~~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPH-----QANTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC-----CCCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc-----CCCHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 456778999999999999999998762 1122344567888998643222222 23444545455443 45
Q ss_pred cCC---CCeEEEEecccC
Q 015003 115 LGI---NDIVVAGGMESM 129 (414)
Q Consensus 115 sG~---~~~vLv~g~e~~ 129 (414)
.|. -|.+|++++...
T Consensus 296 ~~~~~~G~~vll~~~G~G 313 (331)
T 2x3e_A 296 QGILRDGGNMVLTGFGAG 313 (331)
T ss_dssp TTCSCTTCEEEEEEEETT
T ss_pred hCCCCCCCEEEEEEEeHH
Confidence 553 378888877653
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=87.64 E-value=1.6 Score=40.91 Aligned_cols=95 Identities=23% Similarity=0.176 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .....-.+...||+...+. ... ...+++++..+..+...++
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~al~~A~~~i~ 127 (317)
T 1hnj_A 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPA------FDV-AAACAGFTYALSVADQYVK 127 (317)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSCE------EEE-CCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCeE------Eee-CcccHHHHHHHHHHHHHHH
Confidence 368899999999999999998764321 2234455678899863221 223 3456788888888888898
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|-..+++||+..+
T Consensus 128 ~g~~~~vlv~g~e~~s~~~~~~d~~~~~~~GdGA~A~vL~~~~ 170 (317)
T 1hnj_A 128 SGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASE 170 (317)
T ss_dssp TTSCSEEEEEEEECHHHHSCTTCHHHHTTBCCEEEEEEEEEES
T ss_pred CCCCCEEEEEEechhcccCCchhcccceeeccccEEEEEEecC
Confidence 776666553321 223344678888764
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=87.36 E-value=1.6 Score=42.26 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||.+.+-.. +......+.+.||+.......+ .....+++++..+..+...++.+
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~-----v~~~aCss~~~Al~~A~~~i~~g 163 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIP-----IAQLGCAAGGAAINRAHDFCTAY 163 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEE-----ECSCGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEE-----ccCCcCHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999875322 2334456688899865211111 11344567777888888888877
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
..++.|
T Consensus 164 ~~~~vL 169 (382)
T 1u0m_A 164 PEANAL 169 (382)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 666655
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=87.13 E-value=1.8 Score=42.04 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=55.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-... ......+...+|+++.... ... +..++|++..+..+...++.
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~-----~~v-~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS-----YTV-NKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE-----EEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE-----EEc-cccchHHHHHHHHHHHHHhC
Confidence 689999999999999999998764321 2234456778898642111 111 45678888899999999997
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 108 G~~~~vlv~ 116 (395)
T 4e1l_A 108 GENDVVIAG 116 (395)
T ss_dssp TSCSEEEEE
T ss_pred CCCCEEEEE
Confidence 777766653
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=86.98 E-value=1.3 Score=43.01 Aligned_cols=75 Identities=24% Similarity=0.181 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCC--cCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||++.+-. ........+.+.||+...- ... . +..+++++..+..+...++
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~------v-~~aC~s~~~al~~A~~~i~ 175 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMF------Y-HLGCYAGGTVLRLAKDIAE 175 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEE------E-SCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeee------E-ccccHHHHHHHHHHHHHHH
Confidence 5889999999999999999887532 2333456678889986531 111 1 2334666777777777787
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 176 ~g~~~~vL 183 (387)
T 3a5r_A 176 NNKGARVL 183 (387)
T ss_dssp HSTTCEEE
T ss_pred hCCCCEEE
Confidence 76666555
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=86.87 E-value=1.5 Score=40.89 Aligned_cols=95 Identities=22% Similarity=0.136 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+.+.||+...+. ... +..+++++..+..+...++
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~al~~A~~~i~ 127 (313)
T 1zow_A 55 AYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVAS------MDQ-LAACSGFMYSMITAKQYVQ 127 (313)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCCE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCcE------EEE-CCcCHHHHHHHHHHHHHHH
Confidence 368899999999999999998764322 1223456678899864221 112 3446788888888888888
Q ss_pred hcCCCeeEEeec----------------ccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGIC----------------NGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~~----------------~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+... ..|...+++||+..+
T Consensus 128 ~g~~~~vLv~g~e~~s~~~~~~d~~~~~~~gdGa~A~vl~~~~ 170 (313)
T 1zow_A 128 SGDYHNILVVGADKLSKITDLTDRSTAVLFGDGAGAVIIGEVS 170 (313)
T ss_dssp TTSCSCEEEEEEEEGGGTCCTTCHHHHTTBCEEEEEEEEEECS
T ss_pred CCCCCEEEEEEEcccccccCcccccceeeeccceEEEEEEecC
Confidence 776666553321 123345678888765
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=86.69 E-value=1.2 Score=43.59 Aligned_cols=76 Identities=21% Similarity=0.193 Sum_probs=50.9
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCCc-CCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQV-NAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~v-n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.+ +......+.+.||+...-. ..+ . +..+++++..+..+...++.
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v-~~aCas~~~AL~~A~~~i~~ 203 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGV-----F-QHGCFAGGTVLRMAKDLAEN 203 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEE-----E-SCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhce-----e-cCccHHHHHHHHHHHHHHHc
Confidence 57899999999999999998874322 3334456788899865310 111 1 23346667777777777877
Q ss_pred cCCCeeE
Q 015003 380 KKGKYGV 386 (414)
Q Consensus 380 ~~~~~~l 386 (414)
+..++.|
T Consensus 204 G~~~~vL 210 (413)
T 1xes_A 204 NRGARVL 210 (413)
T ss_dssp STTCCEE
T ss_pred CCCCEEE
Confidence 6666555
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=86.05 E-value=2.4 Score=41.29 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=55.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+.... ......+...||+++.... ... +..+++++..+..+...++.
T Consensus 36 ~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~-----~~v-~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 36 VTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPA-----MTI-NIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCE-----EEE-CCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceE-----EEe-ccccHHHHHHHHHHHHHHhc
Confidence 689999999999999999998864321 2334456788898642111 112 44567888889999999998
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 110 G~~~~vLv~ 118 (396)
T 4dd5_A 110 GDADIMLVG 118 (396)
T ss_dssp TSCSEEEEE
T ss_pred CCCCEEEEE
Confidence 777766653
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=85.99 E-value=1.7 Score=41.77 Aligned_cols=77 Identities=17% Similarity=0.079 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||.+.+-. ........+.+.||+.......+ .....+++++..+..+...++.+
T Consensus 100 ~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~-----v~~~aCss~~~al~~A~~~i~~g 174 (374)
T 2h84_A 100 QQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVS-----LNLMGCLAGLSSLRTAASLAKAS 174 (374)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE-----EESCGGGHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEE-----ecCCcCHHHHHHHHHHHHHHHcC
Confidence 5789999999999999999987432 22233456678899865211111 11134567777788888888877
Q ss_pred CCCeeE
Q 015003 381 KGKYGV 386 (414)
Q Consensus 381 ~~~~~l 386 (414)
..++.|
T Consensus 175 ~~~~vL 180 (374)
T 2h84_A 175 PRNRIL 180 (374)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 666655
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.59 E-value=4 Score=39.98 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=52.7
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch-----hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS-----VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~-----~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-.... .........+|++..-. .... +..++|++..+..+...++.
T Consensus 60 ~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p-----~~~v-~~aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 60 SAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVP-----LSTV-NRQCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC-----EEEE-ECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCce-----EEEe-CCCCHHHHHHHHHHHHHHHC
Confidence 5889999999999999999887543221 22333446688842111 1112 44578888899999999998
Q ss_pred cCCCeeEEe
Q 015003 380 KKGKYGVGG 388 (414)
Q Consensus 380 ~~~~~~l~~ 388 (414)
+..+..|+.
T Consensus 134 G~~d~vLv~ 142 (418)
T 2iik_A 134 GSYDIGMAC 142 (418)
T ss_dssp TSCSEEEEE
T ss_pred CCCCEEEEe
Confidence 777766543
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=85.59 E-value=2.1 Score=42.42 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccc-----cchhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd-----~~~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
...+++++|+++|++++|||.+.+.. .+......+.+.||+.. ..+.. ..+ ...+++|+..+..+...+
T Consensus 56 a~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~----~~v-~~aC~gg~~AL~~A~~~I 130 (450)
T 2f82_A 56 SFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEG----VDS-TNACYGGTAALLNCVNWV 130 (450)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBC----CEE-CSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceE----EEh-hhhhHHHHHHHHHHHHHH
Confidence 36889999999999999999998532 23344555677888721 11211 112 234566677777777777
Q ss_pred HhcCC--CeeEEeec------------ccccceeeEEEEEec
Q 015003 378 RHKKG--KYGVGGIC------------NGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~~--~~~l~~~~------------~~gg~~~a~vl~~~~ 405 (414)
+.+.. ++.|+... ..|...+++||+..+
T Consensus 131 ~sg~~~~~~vLVvg~e~~~~~~~~~~~~fGDGA~A~ll~~~~ 172 (450)
T 2f82_A 131 ESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDA 172 (450)
T ss_dssp HSTTCCSCEEEEEEEEEECCSSSTTGGGCEEEEEEEEEESSC
T ss_pred HcCCCcCCeEEEEEeeeccccCCCCCcccccceEEEEeccCC
Confidence 76653 66654331 233345678887544
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=85.40 E-value=1.7 Score=41.73 Aligned_cols=76 Identities=9% Similarity=-0.041 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc------chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~------~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.+-.. .......+.+.||+...+. ..+ +..+++++..+..+...+
T Consensus 58 a~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~~------~~v-~~aC~~~~~al~~A~~~i 130 (357)
T 3s3l_A 58 AARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPA------FGL-AQRCNGGMGAIELAGAYL 130 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSCE------EEE-ECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCcE------EEE-cCccHHHHHHHHHHHHHH
Confidence 368999999999999999999975432 1123455678889843121 112 233456666777777777
Q ss_pred HhcCCC--eeE
Q 015003 378 RHKKGK--YGV 386 (414)
Q Consensus 378 ~~~~~~--~~l 386 (414)
+.+..+ +.|
T Consensus 131 ~sg~~~~~~vL 141 (357)
T 3s3l_A 131 GSGIGAGHAAL 141 (357)
T ss_dssp HTTSSSSSEEE
T ss_pred HcCCCCCCEEE
Confidence 766666 655
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=85.32 E-value=1.7 Score=41.11 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..++++++|+++|++++|||.+.+-.. .......+...||+..-+. ... ...+++++..+..+...++
T Consensus 64 a~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~~------~~v-~~aCas~~~Al~~A~~~i~ 136 (339)
T 1mzj_A 64 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAGG------FDL-SAACAGFCHALSIAADAVE 136 (339)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCEE------EEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCccE------EEc-cccchHHHHHHHHHHHHHH
Confidence 368899999999999999997764321 2223456678899864221 112 2345777778888888888
Q ss_pred hcCCCeeEEee----------------cccccceeeEEEEEec
Q 015003 379 HKKGKYGVGGI----------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 379 ~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~ 405 (414)
.+..++.|+.. +..|-..+++||+..+
T Consensus 137 ~G~~~~vLv~g~e~~s~~~~~~d~~~~~~~GdGA~A~vL~~~~ 179 (339)
T 1mzj_A 137 SGGSRHVLVVATERMTDVIDLADRSLSFLFGDGAGAAVVGPSD 179 (339)
T ss_dssp HSSCSCEEEEEEEEGGGGSCSSCTTTTTTBCEEEEEEEEEEES
T ss_pred CCCCCEEEEEEEcccccccCccccccceEeccCceEEEEEecC
Confidence 77666655322 1223344678888764
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=84.12 E-value=1.5 Score=42.69 Aligned_cols=75 Identities=20% Similarity=0.140 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCCCCCceeecccc----chhHHHHHHHHcCCCCCC--cCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEA----FSVVAIANQKLLGLDPEQ--VNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~----~~~~~~~~~e~lGl~~~~--vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
..+++++|+++|++++|||.+.+-.. .......+.+.||+.... +.+ ....+++|+..+..+...++
T Consensus 118 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v-------~~~aCas~~~Al~~A~~~i~ 190 (393)
T 1ted_A 118 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVV-------NFMGCAAAMNALGTATNYVR 190 (393)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE-------ESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEe-------ccchhHHHHHHHHHHHHHHH
Confidence 57899999999999999999874322 233345667889986531 111 13345677778888888888
Q ss_pred hcCCCeeE
Q 015003 379 HKKGKYGV 386 (414)
Q Consensus 379 ~~~~~~~l 386 (414)
.+..++.|
T Consensus 191 ~G~~~~vL 198 (393)
T 1ted_A 191 AHPAMKAL 198 (393)
T ss_dssp HSTTCEEE
T ss_pred cCCCCEEE
Confidence 77666554
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=83.40 E-value=2.6 Score=40.99 Aligned_cols=77 Identities=12% Similarity=0.106 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccc-----hhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAF-----SVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~-----~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||.+.+-... ......+...+|++...... .=+..++|++..+..+...++.
T Consensus 34 ~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~------~v~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 34 VPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGY------TIQRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEE------EEECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEE------EecCcchHHHHHHHHHHHHHhC
Confidence 689999999999999999998754322 22344557778986421111 1145567888889899999988
Q ss_pred cCCCeeEE
Q 015003 380 KKGKYGVG 387 (414)
Q Consensus 380 ~~~~~~l~ 387 (414)
+..+..|+
T Consensus 108 G~~~~vlv 115 (394)
T 3ss6_A 108 GVSEVVVA 115 (394)
T ss_dssp TSCSEEEE
T ss_pred CCCCEEEE
Confidence 77776665
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.16 E-value=2.7 Score=42.05 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecccc-----chhHHHHHHHHcCCCC-CCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEA-----FSVVAIANQKLLGLDP-EQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~-----~~~~~~~~~e~lGl~~-~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
...+++++|+++|++++|||++.+... .......+.+.|+... ..+... .+ ....++|+..+..+...+
T Consensus 77 a~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~----dv-~~aC~gg~~AL~~A~~~i 151 (478)
T 2p8u_A 77 CMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGI----DT-TNACYGGTAAVFNAVNWI 151 (478)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCBCC----EE-ESGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCceEE----EE-cchhHHHHHHHHHHHHHH
Confidence 368999999999999999999985422 2333344444444321 112111 12 123455566666676777
Q ss_pred HhcC--CCeeEEee------------cccccceeeEEEEEec
Q 015003 378 RHKK--GKYGVGGI------------CNGGGGASALVLELMQ 405 (414)
Q Consensus 378 ~~~~--~~~~l~~~------------~~~gg~~~a~vl~~~~ 405 (414)
+.+. .++.|+.. ..+|...+|+||+..+
T Consensus 152 ~sg~~~~~~aLVV~~Eia~~~~~~~~~~fGdGA~A~Ll~~~~ 193 (478)
T 2p8u_A 152 ESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNA 193 (478)
T ss_dssp TSTTCCSCEEEEEEEEEECCCSSTTGGGCEEEEEEEEEESSC
T ss_pred HcCCccCCEEEEEEeeeecccCCCCCCcccceeEEEEEecCC
Confidence 7666 66666443 2233355677886543
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=80.99 E-value=4.9 Score=39.75 Aligned_cols=78 Identities=10% Similarity=0.158 Sum_probs=53.2
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccch------hHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFS------VVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLR 378 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~------~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~ 378 (414)
.++++++|+++|++++|||.+.+-.... .....+...||++.... .... +..++||+..+..+...++
T Consensus 60 ~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p-----~~~v-~~aCaSg~~Al~~A~~~I~ 133 (442)
T 2wu9_A 60 APVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVA-----VRTV-NRQCSSGLQAVADVAAAIK 133 (442)
T ss_dssp HHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSC-----EEEE-ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCce-----EEEe-CCcCHHHHHHHHHHHHHHH
Confidence 5789999999999999999877543322 22344567789842111 1112 3456788889999999999
Q ss_pred hcCCCeeEEe
Q 015003 379 HKKGKYGVGG 388 (414)
Q Consensus 379 ~~~~~~~l~~ 388 (414)
.+..+..|+.
T Consensus 134 sG~~d~vLvg 143 (442)
T 2wu9_A 134 AGFYDIGIGA 143 (442)
T ss_dssp TTSCSEEEEE
T ss_pred CCCCCEEEEE
Confidence 7766665543
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=80.77 E-value=5.1 Score=38.78 Aligned_cols=78 Identities=14% Similarity=0.032 Sum_probs=53.4
Q ss_pred HHHHHHHHHHc-CCCCCCCceeecccc------chhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHH
Q 015003 305 SLAIPKAIANA-GLEASQIDYYEINEA------FSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVL 377 (414)
Q Consensus 305 ~~a~~~al~~a-Gl~~~DId~~~~hd~------~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql 377 (414)
.++++++|+++ |++++|||.+.+-.. .......+...+|++..... .. =+..++|++..+..+...+
T Consensus 32 ~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~-----~~-v~~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 32 AHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPA-----VT-VNRLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCC-----EE-EECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcE-----eE-ecCcchHHHHHHHHHHHHH
Confidence 68999999999 999999998875322 22334445667887532111 11 1455678888899999999
Q ss_pred HhcCCCeeEEe
Q 015003 378 RHKKGKYGVGG 388 (414)
Q Consensus 378 ~~~~~~~~l~~ 388 (414)
+.+..+..|+.
T Consensus 106 ~sG~~d~vLv~ 116 (387)
T 3goa_A 106 MTGDAQVCLVG 116 (387)
T ss_dssp HTTSCSEEEEE
T ss_pred hCCCCCEEEEE
Confidence 97777766653
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=80.04 E-value=13 Score=36.13 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCCc----eeeccccc------------------------h-------hHHHHHHHHcCCCCCCc
Q 015003 305 SLAIPKAIANAGLEASQID----YYEINEAF------------------------S-------VVAIANQKLLGLDPEQV 349 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId----~~~~hd~~------------------------~-------~~~~~~~e~lGl~~~~v 349 (414)
.+++++||+.||++++||| .+.+-... . ...-.+...||+....+
T Consensus 79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 158 (413)
T 3o04_A 79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINS 158 (413)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcce
Confidence 5789999999999999998 55432211 0 01223455667654222
Q ss_pred CCCCCccccCCCccchHHHHHHHHHHHHHhcCCCeeEEe
Q 015003 350 NAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGG 388 (414)
Q Consensus 350 n~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~ 388 (414)
.+ ...++|++..+..+...|+.+..+..|+.
T Consensus 159 ~v--------~~aCss~~~Al~~A~~~I~~G~~d~~lvg 189 (413)
T 3o04_A 159 TT--------VTACATATNSIGDAFKVIERGDADAMITG 189 (413)
T ss_dssp CC--------CCGGGHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred ee--------cchhHHHHHHHHHHHHHHHcCCCCEEEEe
Confidence 22 34568888899999999998776666543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 414 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 8e-78 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 5e-65 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 3e-47 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 1e-45 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 2e-36 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 4e-31 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 2e-30 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 2e-27 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 0.002 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 239 bits (612), Expect = 8e-78
Identities = 113/269 (42%), Positives = 156/269 (57%), Gaps = 4/269 (1%)
Query: 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANL 72
+ I ART +G F G+ ++ A +LG+ I L+RA V V EV G VL A
Sbjct: 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE 62
Query: 73 GQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
GQ PARQAA+ AG+P +N++ SG++AV L Q I G I+VAGGMESMS A
Sbjct: 63 GQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 133 PKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIR 192
P + A R G ++G ++D M+KDGL D + + MG AE A + ++RDEQD++A+
Sbjct: 123 P-HCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVA 181
Query: 193 SFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLRPSFKEGG 251
S + AAQ G F EI P + +G I VD DE + + KLRP+F + G
Sbjct: 182 SQNKAEAAQKDGRFKDEIVPFIVKGRKGD--ITVDADEYIRHGATLDSMAKLRPAFDKEG 239
Query: 252 SVTAGNASIISDGAAALVLVSGVKALELG 280
+VTAGNAS ++DGAAA +L+S +A G
Sbjct: 240 TVTAGNASGLNDGAAAALLMSEAEASRRG 268
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 207 bits (527), Expect = 5e-65
Identities = 98/275 (35%), Positives = 148/275 (53%), Gaps = 9/275 (3%)
Query: 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLG 73
+ IV RTP+G G+L+SV L + A+ + R+ V V++V+ G A
Sbjct: 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGED 60
Query: 74 QA-PARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNA 132
AR A L AG P V T+N++C SG++AV AA++I G + + G+ESMS A
Sbjct: 61 NRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA 120
Query: 133 PKYLAEARKGSRLGHDTIVDG-----MLKDGLWDVYNDFGMGVCAEICANKHTITRDEQD 187
P + + +G G+ + D + + +Y MG AE A + I R+EQD
Sbjct: 121 PYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQD 180
Query: 188 SYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKF-DAAKLMKLRPS 246
+A+ S ++ + A G F E+ PV + G+ I+V++DEG + KL LRP
Sbjct: 181 RFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKE--EILVEQDEGPRRDTSLEKLAALRPV 238
Query: 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281
F+EGG+VTAGN+S ++DGAAA++LVS A GL
Sbjct: 239 FREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 160 bits (406), Expect = 3e-47
Identities = 90/273 (32%), Positives = 129/273 (47%), Gaps = 20/273 (7%)
Query: 11 KARDVCIVGVARTPMG-GFLGSLSSVSATKLGSIAIECALKRA----NVKPLLVQEVFFG 65
+ DV IV R+ +G GF G+ V+ L + + R L++EV G
Sbjct: 8 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACG 67
Query: 66 NVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
NVL+ G R A L +GIP S +N+ CSSG+ AV A I++G DI +A G
Sbjct: 68 NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALG 127
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+ESM+N K + I L+ MG+ E A I+R +
Sbjct: 128 VESMTNNYKNVNP--------LGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKD 179
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGL-EKFDAAKLMKLR 244
QD +A S+++ A+N GLF EI P+++ G I DEG A L +R
Sbjct: 180 QDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGS-----ICQSDEGPRPNVTAESLSSIR 234
Query: 245 PSF-KEGGSVTAGNASIISDGAAALVLVSGVKA 276
P+F K+ G+ TAGNAS +SDG A ++L A
Sbjct: 235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVA 267
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 156 bits (395), Expect = 1e-45
Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 17/275 (6%)
Query: 9 SIKARDVCIVGVARTPMGGFLGSLSS-VSATKLGSIAIECALKR-ANVKPLLVQEV-FFG 65
S+ RDV IV RTPMG G + A + + I L+R + V P V++V +
Sbjct: 1 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGC 60
Query: 66 NVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGG 125
+ G AR A+L IP++ T++++C S M A+ AAQ+I G D+ V GG
Sbjct: 61 VNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGG 120
Query: 126 MESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDE 185
+E M + VD L+ MG+ AE+ H I+R++
Sbjct: 121 VEHMGHVS-------------MMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQ 167
Query: 186 QDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRP 245
QD++A+RS + A G F EI P++ G I + L L+P
Sbjct: 168 QDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKP 227
Query: 246 SFK-EGGSVTAGNASIISDGAAALVLVSGVKALEL 279
+F +GG+VTAG +S I+DGA+ ++++S +A +L
Sbjct: 228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 127 bits (320), Expect = 2e-36
Identities = 49/122 (40%), Positives = 71/122 (58%)
Query: 281 LQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK 340
+Q + +I +A P+ T P A KA+ AG + +D E NEAF+ A A K
Sbjct: 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNK 60
Query: 341 LLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALV 400
LG DP VN +GGA+++GHP+G SGARIL TLL ++ + + G+ +C GGG A+
Sbjct: 61 DLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMC 120
Query: 401 LE 402
+E
Sbjct: 121 IE 122
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 113 bits (284), Expect = 4e-31
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 279 LGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIAN 338
L L V+ + F PE P+ AIPK + GL+ ID +EINEAF+ A+
Sbjct: 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYC 60
Query: 339 QKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASA 398
LG+D +VN GGA++LGHPLGC+GAR + T+L L+ K + GV +C G G +A
Sbjct: 61 IHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELK--KDQIGVVSMCIGTGMGAA 118
Query: 399 LVLE 402
+
Sbjct: 119 AIFI 122
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 111 bits (279), Expect = 2e-30
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 284 IAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQK--L 341
+A++R A A P P A KA+ AGL S + E+NEAF+ A+A +
Sbjct: 3 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 62
Query: 342 LGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVL 401
L ++ +++N +GGA++LGHPLG SGARIL TL+ +R +K ++G+ +C G G A+V+
Sbjct: 63 LSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVV 122
Query: 402 ELM 404
E M
Sbjct: 123 EGM 125
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 103 bits (258), Expect = 2e-27
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 280 GLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIA-- 337
GL+ +A IR A A P P A KA+ AGL + ID+ E+NEAF+ A+
Sbjct: 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60
Query: 338 -NQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGA 396
+ K+L E+VN HGGA++LGHP GCSGARI TLL V++ G +G+ +C G G
Sbjct: 61 KDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQG 120
Query: 397 SALVLE 402
A V E
Sbjct: 121 IATVFE 126
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 37.4 bits (85), Expect = 0.002
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 99 CSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKG 142
+ G+ A+ A ++I+ G +VV+GG++S + ++++ G
Sbjct: 160 QAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASG 202
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.93 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.93 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.92 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.92 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.91 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.76 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.74 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.74 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.72 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.72 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.7 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.67 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.66 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.59 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.57 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.55 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.54 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.5 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.39 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.35 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.28 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.26 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.25 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.25 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.11 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.01 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.99 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.94 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.94 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.85 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.8 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 98.76 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 98.56 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 98.25 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.22 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 98.21 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.53 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 95.44 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 95.17 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 95.05 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 94.63 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 94.43 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 94.39 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 94.11 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 94.07 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 93.61 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 93.09 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 91.09 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 84.4 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=1.5e-43 Score=332.32 Aligned_cols=265 Identities=42% Similarity=0.622 Sum_probs=244.1
Q ss_pred CceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcce
Q 015003 13 RDVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 13 ~~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~ 92 (414)
.+|+||+..+|||+++.+.+.+.++.+|+..+++.+|+++|++|++||.+++|+..+...+++++.++++..|++..+|+
T Consensus 3 ~~V~Iv~~~RTP~g~~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vpa 82 (268)
T d1m3ka1 3 PSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATA 82 (268)
T ss_dssp CCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEE
T ss_pred CCEEEEeceeCcccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCcccccc
Confidence 57999999999999999999999999999999999999999999999999999999877889999999999999988999
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHH
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCA 172 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (414)
++|+..|+|++.++..|+++|++|++|++|++|+|+||..|+... .+.+..++.....+.+..+++++++....|+..|
T Consensus 83 ~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~-~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~~A 161 (268)
T d1m3ka1 83 WGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAH-LRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTA 161 (268)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEEC-CSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHHHH
T ss_pred eeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhh-cccCCcCCCcccccccccccCcCcccCCcHHHHH
Confidence 999999999999999999999999999999999999999886653 2334455555555666677889999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCCccCCC
Q 015003 173 EICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPSFKEGG 251 (414)
Q Consensus 173 ~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 251 (414)
+.+.++||+||+++++|++.||+++..++.++.|.++++|+..+...+.. .+++|+.+|+ ++.|.|.+.||+|+++|
T Consensus 162 e~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~~g~~--~v~~d~~~r~~tt~e~L~~L~p~f~~~G 239 (268)
T d1m3ka1 162 ENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDI--TVDADEYIRHGATLDSMAKLRPAFDKEG 239 (268)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCE--EECSCSSCCTTCCHHHHHTCCBSSCTTC
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCCCCCe--EEeCCCCCCCCCCHHHHcCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999887776653 5889999998 99999999999999899
Q ss_pred ccccCCCCcccCceeEEEEeCHHHHHHcC
Q 015003 252 SVTAGNASIISDGAAALVLVSGVKALELG 280 (414)
Q Consensus 252 ~~~~~~~~~~~DGAaA~vL~s~~~a~~~~ 280 (414)
.+|+.++|+++|||+|+||+|+++++++|
T Consensus 240 tvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 240 TVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp CCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred cEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999999875
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.2e-42 Score=327.66 Aligned_cols=266 Identities=37% Similarity=0.529 Sum_probs=235.8
Q ss_pred ceEEEeeecCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCCCCCcce
Q 015003 14 DVCIVGVARTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVC 92 (414)
Q Consensus 14 ~v~ivG~~~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl~~~~~~ 92 (414)
++|||+..||||+|+.|.+++.++.+|+..+++.+|+++||+|++||.+++|++.+.. .+++++.++++..|++.++|+
T Consensus 1 ~a~Iv~~~RTPfgk~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~ 80 (273)
T d1ulqa1 1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG 80 (273)
T ss_dssp CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred CEEEEccccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccce
Confidence 5899999999999999999999999999999999999999999999999999998754 567899999999999888999
Q ss_pred eeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCcccccccc-----ccccccccCCc
Q 015003 93 TTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLK-----DGLWDVYNDFG 167 (414)
Q Consensus 93 ~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 167 (414)
++|+..|+|++.++..|++.|++|.+|++|++|+|+||..|+...+.+.+.+.+.....+.... .+..+++....
T Consensus 81 ~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T d1ulqa1 81 CTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTES 160 (273)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCC
T ss_pred EEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhccccccc
Confidence 9999999999999999999999999999999999999999987766555544444333332222 23334455678
Q ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCCC
Q 015003 168 MGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRPS 246 (414)
Q Consensus 168 ~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (414)
|+..|+.++++||+|||++++|++++|+++..+++++.|.++++|+..+..... ..+++|+.+|+ ++.|.+.+.||+
T Consensus 161 m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~~~~~--~~v~~d~~~r~~tt~e~La~L~p~ 238 (273)
T d1ulqa1 161 MGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEE--ILVEQDEGPRRDTSLEKLAALRPV 238 (273)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEE--EEECSCSCCCTTCCHHHHHHSCBS
T ss_pred hHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccccccCc--eEEeCCCCcCCCCCHHHHccCCCC
Confidence 999999999999999999999999999999999999999999999877655432 35789999999 999999999999
Q ss_pred ccCCCccccCCCCcccCceeEEEEeCHHHHHHcCC
Q 015003 247 FKEGGSVTAGNASIISDGAAALVLVSGVKALELGL 281 (414)
Q Consensus 247 ~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~ 281 (414)
|.++|.+|+.+||+++|||+|+||+|++.++++|+
T Consensus 239 f~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 239 FREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp SSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred cCCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 99899999999999999999999999999999874
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.8e-41 Score=316.83 Aligned_cols=256 Identities=34% Similarity=0.487 Sum_probs=229.8
Q ss_pred cCCCceEEEeeecCccccCC-CCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCC-CCCcHHHHHHHHCCC
Q 015003 10 IKARDVCIVGVARTPMGGFL-GSLSSVSATKLGSIAIECALKR-ANVKPLLVQEVFFGNVLSAN-LGQAPARQAALGAGI 86 (414)
Q Consensus 10 ~~~~~v~ivG~~~t~~~~~~-~~~~~~~~~~L~~~A~~~AL~d-Agi~~~~Id~vi~g~~~~~~-~~~~~a~~va~~lgl 86 (414)
.++|+|||||..+|||+|.+ +.+.+.++.||+.++++++|++ +|++|++||.+++|+..+.. .+++++.++++..|+
T Consensus 2 ~n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~ 81 (262)
T d1wdkc1 2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI 81 (262)
T ss_dssp CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred CCCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhc
Confidence 34689999999999999874 5678999999999999999996 89999999999999998764 678999999999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+.++|+++|+..|+|++.++..|+..|++|.+|++|++|+|+||..|..... +......+++++...
T Consensus 82 p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~-------------~~~~~~~~~~~~~~~ 148 (262)
T d1wdkc1 82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV-------------DPNPHMSLYAAKASG 148 (262)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB-------------CCCGGGGGTSCGGGG
T ss_pred ccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccccccccc-------------ccccccccccccccc
Confidence 9899999999999999999999999999999999999999999997753321 122234555666678
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
.++..|+++.++||++|+++++|++.+|+++..++..+.|++||+|++.+++.+.+ ..++.|+.+|+ +|.|.+.+.||
T Consensus 149 ~mg~tae~~a~~~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~~~-~~~~~De~~R~~tt~E~La~LkP 227 (262)
T d1wdkc1 149 MMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFL-KIFDYDETIRPDTTLESLAALKP 227 (262)
T ss_dssp SHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCE-EEECSCTTCCTTCCHHHHHTSCC
T ss_pred chhhhHHHHHHHhccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccccc-cccccccCCCCCCCHHHHcCCCC
Confidence 89999999999999999999999999999999999999999999999998877765 35789999998 99999999999
Q ss_pred CccC-CCccccCCCCcccCceeEEEEeCHHHHHHc
Q 015003 246 SFKE-GGSVTAGNASIISDGAAALVLVSGVKALEL 279 (414)
Q Consensus 246 ~~~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~ 279 (414)
+|.+ +|.+|+.++|+++|||+|+||+|+++++++
T Consensus 228 ~f~~~~GtvTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp SSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred cccCCCCcCcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 9974 699999999999999999999999999874
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.1e-40 Score=307.27 Aligned_cols=254 Identities=35% Similarity=0.487 Sum_probs=222.5
Q ss_pred CCceEEEeeecCcccc-CCCCCCCCCHHHHHHHHHHHHHHH----cCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCC
Q 015003 12 ARDVCIVGVARTPMGG-FLGSLSSVSATKLGSIAIECALKR----ANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGI 86 (414)
Q Consensus 12 ~~~v~ivG~~~t~~~~-~~~~~~~~~~~~L~~~A~~~AL~d----Agi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl 86 (414)
+++|+|||..+|||+| +.|.+.+.++.+|+..+++++|++ ++++|++||.+++|++.+...+++++.++++..|+
T Consensus 9 ~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~agl 88 (269)
T d1afwa1 9 PEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGI 88 (269)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhccc
Confidence 5789999999999998 578999999999999999999985 46999999999999998877778899999999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDF 166 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (414)
+.++|+++|+..|+|+++++..|++.|++|.+|++|++|+|+||+.|..... +... ........++.++...
T Consensus 89 p~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~------~~~~--~~~~~~~~~~~~~~~~ 160 (269)
T d1afwa1 89 PYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNP------LGMI--SSEELQKNREAKKCLI 160 (269)
T ss_dssp CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCT------TCSC--CCHHHHHCTTGGGGGS
T ss_pred cccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccccccccccc------cccc--ccchhccccccccccc
Confidence 9899999999999999999999999999999999999999999986654322 1110 0111223344556668
Q ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhHHhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccc-cCHHHHhcCCC
Q 015003 167 GMGVCAEICANKHTITRDEQDSYAIRSFKRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEK-FDAAKLMKLRP 245 (414)
Q Consensus 167 ~~~~~a~~~~~~~g~t~~~l~~~a~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~ 245 (414)
.|+..|+.+.++||+||+++++|++.+|++|..++..+.|.++|+|++.++.. .++.||.+|+ +|.|.+.+.+|
T Consensus 161 ~Mg~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~~~-----~~~~De~~R~~tt~E~La~L~P 235 (269)
T d1afwa1 161 PMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGS-----ICQSDEGPRPNVTAESLSSIRP 235 (269)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSC-----EECSCSSCCSCCCHHHHHHCCB
T ss_pred ccccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceeccccc-----EEecCCCcCCCCCHHHHcCCCC
Confidence 89999999999999999999999999999999999999999999999887652 4899999998 99999999999
Q ss_pred CccC-CCccccCCCCcccCceeEEEEeCHHHHHH
Q 015003 246 SFKE-GGSVTAGNASIISDGAAALVLVSGVKALE 278 (414)
Q Consensus 246 ~~~~-~g~~~~~~~~~~~DGAaA~vL~s~~~a~~ 278 (414)
+|.+ +|.+|+.++|+++|||+|+||+|+++|++
T Consensus 236 ~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 236 AFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp SCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred ccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 9965 49999999999999999999999999875
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.93 E-value=6.7e-26 Score=183.51 Aligned_cols=123 Identities=40% Similarity=0.639 Sum_probs=119.6
Q ss_pred cceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCC
Q 015003 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHP 361 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~ 361 (414)
+|+++|.++.....+|..+..+|..+++++|+++|++.+|||+||+|++|..+.+.+.+.||++++++|++||.+++|||
T Consensus 2 ~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGHP 81 (124)
T d1m3ka2 2 QPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHP 81 (124)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCC
T ss_pred CcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCccccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 362 LGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 362 ~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+|+||.+.+..++++|+.+.+++|+++.|.+||++.++++|+.
T Consensus 82 ~GaSGarl~~tl~~~L~~~~~~~Glas~C~gGG~g~A~liE~v 124 (124)
T d1m3ka2 82 IGASGARILNTLLFEMKRRGARKGLATLCIGGGMGVAMCIESL 124 (124)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 9999999999999999999999999999999999999999973
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=1.4e-25 Score=181.94 Aligned_cols=123 Identities=40% Similarity=0.655 Sum_probs=117.6
Q ss_pred cceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHH--cCCCCCCcCCCCCccccC
Q 015003 282 QVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKL--LGLDPEQVNAHGGAVSLG 359 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~--lGl~~~~vn~~Gg~~~~G 359 (414)
+|+++|.++.....+|..+..+|..+++++|+++|++.+|||+||+|++|..+.+.+++. ++++++++|++||.+++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlG 80 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALG 80 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHC
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCccccc
Confidence 478999999999999999999999999999999999999999999999999999999999 566888999999999999
Q ss_pred CCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 360 HPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 360 h~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
||+|+||.+.+..++++|+.+.+++++++.|.+||++.++++|+.
T Consensus 81 HP~GASGari~~tl~~~L~~~~~~~G~as~C~gGG~g~A~~iE~i 125 (125)
T d1ulqa2 81 HPLGASGARILTTLVHEMRRRKVQFGLATMCIGVGQGIAVVVEGM 125 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCccccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 999999999999999999999999999999999999999999974
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=1e-25 Score=182.65 Aligned_cols=124 Identities=40% Similarity=0.696 Sum_probs=118.5
Q ss_pred cCCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCcccc
Q 015003 279 LGLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSL 358 (414)
Q Consensus 279 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~ 358 (414)
++.+|+++|.++.....+|..+..+|..+++++|+++|++.+|||+||+|++|+.+.+.+.+.|+++++++|++||.+++
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAl 80 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIAL 80 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHH
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCcccee
Confidence 36789999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 359 GHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 359 Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
|||+|+||.+.+.+++++|+. +++++++.|.+||++.++++|++
T Consensus 81 GHP~GaSGarlv~~l~~~L~~--~~~glas~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 81 GHPLGCTGARQVATILRELKK--DQIGVVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp CBCTTTHHHHHHHHHHHHSCT--TCEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCcCCchHHHHHHHHHHhcc--CCEEEEEEcccCCcEEEEEEEeC
Confidence 999999999999999999974 57899999999999999999974
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=1.9e-25 Score=219.00 Aligned_cols=255 Identities=16% Similarity=0.133 Sum_probs=185.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|++|+|||.||+++++ ++..|..+.+|+..||+++.+..+.+. .+|+++++||..|..+|+
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~ 169 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR 169 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHh
Confidence 467899999999999999999999999998876 467899999999999998766667775 589999999999999999
Q ss_pred cCCCCeEEEEecccCCCCchhhhhhhccCCCCCCccccccccccccccccCCchHHHHHHHHHHcCCCHHHHHHHHHHhH
Q 015003 115 LGINDIVVAGGMESMSNAPKYLAEARKGSRLGHDTIVDGMLKDGLWDVYNDFGMGVCAEICANKHTITRDEQDSYAIRSF 194 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~~~l~~~a~~~~ 194 (414)
+|.++.+||+++|.++.... . .
T Consensus 170 sg~~~~~LVV~~E~~s~~~~-~---------~------------------------------------------------ 191 (372)
T d1teda_ 170 AHPAMKALVVCIELCSVNAV-F---------A------------------------------------------------ 191 (372)
T ss_dssp HSTTCEEEEEEEEECGGGCC-C---------C------------------------------------------------
T ss_pred cCCCccceeeeehhhccccc-C---------C------------------------------------------------
Confidence 99999999999998764110 0 0
Q ss_pred HhHHHhhcCCCcccccceeeecCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHH
Q 015003 195 KRGIAAQNSGLFAWEIAPVEMSSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGV 274 (414)
Q Consensus 195 ~~a~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~ 274 (414)
++ .++. ....+ +||||+|+||+..+
T Consensus 192 -------------d~---------------------------~~~~--------~~~~l-------fGDGAaA~ll~~~~ 216 (372)
T d1teda_ 192 -------------DD---------------------------INDV--------VIHSL-------FGDGCAALVIGASQ 216 (372)
T ss_dssp -------------SS---------------------------HHHH--------HHHHH-------BCEEEEEEEEEEEC
T ss_pred -------------Cc---------------------------chhh--------hhhhh-------hcccceeEEeccCC
Confidence 00 0000 00012 79999999998754
Q ss_pred HHHHcCCcceEEEEEEEEeec-CCCc----------c------------ccchHHHHHHHHHHcCCCCCCCceeeccccc
Q 015003 275 KALELGLQVIAKIRGFADAAQ-APEW----------F------------TTAPSLAIPKAIANAGLEASQIDYYEINEAF 331 (414)
Q Consensus 275 ~a~~~~~~~~~~i~g~~~~~~-~~~~----------~------------~~~~~~a~~~al~~aGl~~~DId~~~~hd~~ 331 (414)
...... .....+.+...... .... + .....+.++++|+++|++++|||++.+|+.+
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~ 295 (372)
T d1teda_ 217 VQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGG 295 (372)
T ss_dssp TTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSC
T ss_pred cccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCcc
Confidence 322111 11122333221110 0000 0 0112578999999999999999999999999
Q ss_pred hhHHHHHHHHcCCCCCCcCCCC-CccccCCCccchHHHHHHHHHHHHHhcC-CCeeEEeecccccceeeEEEEEec
Q 015003 332 SVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKK-GKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 332 ~~~~~~~~e~lGl~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~ql~~~~-~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
..+...+.+.||++++++..+- .+..+||+.++|-...+.+++++-+... +++.+...+|.|-++.++|||...
T Consensus 296 ~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~ 371 (372)
T d1teda_ 296 PKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 371 (372)
T ss_dssp HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence 9999999999999998874431 1345799998887777666666544333 356677777777788999999764
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.91 E-value=7.2e-25 Score=178.62 Aligned_cols=125 Identities=44% Similarity=0.695 Sum_probs=118.5
Q ss_pred CCcceEEEEEEEEeecCCCccccchHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCC---CCCCcCCCCCcc
Q 015003 280 GLQVIAKIRGFADAAQAPEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGL---DPEQVNAHGGAV 356 (414)
Q Consensus 280 ~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl---~~~~vn~~Gg~~ 356 (414)
|.+|+++|.++.....+|..+..+|..+++++|+++|++.+|||+||+|++|..+.+.+++.+++ +.+++|++||.+
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGai 80 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAI 80 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHH
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcc
Confidence 46789999999999999999999999999999999999999999999999999999999999876 347899999999
Q ss_pred ccCCCccchHHHHHHHHHHHHHhcCCCeeEEeecccccceeeEEEEEe
Q 015003 357 SLGHPLGCSGARILVTLLGVLRHKKGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 357 ~~Gh~~gasG~~~l~~~~~ql~~~~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
++|||+|+||.+.+..++++|+.+++++++++.|.+||++.++++|+.
T Consensus 81 AlGHP~GASGaRlv~~l~~~L~~~~~~~Glas~C~gGG~g~A~~iErv 128 (128)
T d1wdkc2 81 ALGHPFGCSGARISGTLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 128 (128)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred cccccccccchhHHHHHHHHHHhcCCCEEEEEecccccceeEEEEEeC
Confidence 999999999999999999999999999999999999999999999974
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=2.2e-18 Score=150.22 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=98.4
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+++...++.+..+|+.+|+++||+++|++|++||.+++++.++++..|..+..++..||++ ++.+++++++|+++
T Consensus 37 ~Gi~~r~~~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~ 115 (174)
T d1hnja1 37 TGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGF 115 (174)
T ss_dssp HCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHH
T ss_pred cCcceeeecCCCccchHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC-chhhhhhhhhhccH
Confidence 44444444456789999999999999999999999999999999999988899999999999997 69999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
++||..|..+|++|.++.+||+++|..|.
T Consensus 116 ~~al~~A~~~i~sg~~~~~Lvv~~e~~S~ 144 (174)
T d1hnja1 116 TYALSVADQYVKSGAVKYALVVGSDVLAR 144 (174)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECHHH
T ss_pred HHHHHHHHHHHhcCCcceeEEEeeehhhc
Confidence 99999999999999999999999998764
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.74 E-value=6.9e-18 Score=147.91 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=99.2
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+|+...++++..+|+.+|+++||+++|++|++||.+++++.++++..|..+..++..|+.+ ++.+++++++|+++
T Consensus 44 tGi~~R~~~~~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~ 122 (181)
T d1mzja1 44 TGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGF 122 (181)
T ss_dssp HCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHH
T ss_pred cCcceehhhccCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCC-CccceeHHhhhccH
Confidence 55555555567889999999999999999999999999999999999888999999999999986 68999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
++||..|..+|++|.++.+||+++|..+.
T Consensus 123 ~~aL~~A~~~i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 123 CHALSIAADAVESGGSRHVLVVATERMTD 151 (181)
T ss_dssp HHHHHHHHHHHHHSSCSCEEEEEEEEGGG
T ss_pred HHHHHHHhCHhhcCCCceeEEeeeccccc
Confidence 99999999999999999999999998764
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.72 E-value=9.4e-18 Score=145.81 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=98.6
Q ss_pred cCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCch
Q 015003 22 RTPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSS 101 (414)
Q Consensus 22 ~t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s 101 (414)
.|++.+|+...++++..+|+.+|+++||+++|++|+|||.|++++.++++..|..+..++.+||. ++.+++++.+|++
T Consensus 34 ~~Gi~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~--~~~~~di~~~C~g 111 (172)
T d1ub7a1 34 RTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCPG 111 (172)
T ss_dssp HTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTTH
T ss_pred ccCceeeeeccccccccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhcc--Cccceeehhcccc
Confidence 35565565556678999999999999999999999999999999999988889999999999995 4899999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 102 GMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 102 ~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
++.+|..|..++++|.++.+||+++|..|.
T Consensus 112 ~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 112 WIYALAQAHALVEAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred HHHHHHHHhhhhhcCCcceeEEeccccccc
Confidence 999999999999999999999999998875
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.72 E-value=7.6e-17 Score=142.64 Aligned_cols=157 Identities=23% Similarity=0.163 Sum_probs=127.6
Q ss_pred cCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCC-cceEEEEEEEEee
Q 015003 216 SSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGL-QVIAKIRGFADAA 294 (414)
Q Consensus 216 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~-~~~~~i~g~~~~~ 294 (414)
|++.|+| ||++ ++|++ ++||++++||++.+.|++++. ++++.|.|++...
T Consensus 2 p~~~~rP---FD~~-------------------a~G~~-------~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~ 52 (194)
T d1tqyb2 2 PDRAYLP---FDER-------------------AAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTF 52 (194)
T ss_dssp GGGSCCT---TSTT-------------------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEE
T ss_pred CCCCcCc---ccCC-------------------CCCEe-------eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccc
Confidence 3567888 8877 78898 799999999999999999887 5899999999887
Q ss_pred cCCC--ccccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCccccCCCccchHH
Q 015003 295 QAPE--WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGAVSLGHPLGCSGA 367 (414)
Q Consensus 295 ~~~~--~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~ 367 (414)
+... ....+..++++++|+++|++++||++++.|-..+.. +. .+.+.|| .+.+.++..|..+||+.+++|+
T Consensus 53 d~~~~~~~~~g~~~~i~~aL~~a~i~~~di~~v~ahgtGt~~~D~~E~~al~~~f~--~~~~~v~s~K~~~GH~~~AsG~ 130 (194)
T d1tqyb2 53 DPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFG--REGVPVTVPKTTTGRLYSGGGP 130 (194)
T ss_dssp CCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHC--TTCSEEECGGGGTCBCGGGHHH
T ss_pred cccccccchhhhhhhhhhhcccccccccceeeeeccccCcccccHHHhhhhhhhhh--cccccccccccccccccccccc
Confidence 6432 223456789999999999999999999999888764 22 2234455 3446677779999999999999
Q ss_pred HHHHHHHHHHHhc---------------------------CCCeeEEeecccccceeeEEEEE
Q 015003 368 RILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 368 ~~l~~~~~ql~~~---------------------------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
..++.++.+|+.+ ..++.+.++++.||+++++||++
T Consensus 131 ~~li~~~~~l~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 131 LDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp HHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred ceehhhhhhhhhceeccccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 9999999999865 23456788899999999999986
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.70 E-value=5.5e-17 Score=144.93 Aligned_cols=161 Identities=25% Similarity=0.277 Sum_probs=132.2
Q ss_pred cCCCCCCceeeecCCCccccCHHHHhcCCCCccCCCccccCCCCcccCceeEEEEeCHHHHHHcCCcceEEEEEEEEeec
Q 015003 216 SSGRGKPFIIVDKDEGLEKFDAAKLMKLRPSFKEGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQ 295 (414)
Q Consensus 216 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~DGAaA~vL~s~~~a~~~~~~~~~~i~g~~~~~~ 295 (414)
|++.||| ||++ ++|++ ++||++++||++.+.+++++.++++.|.|++...+
T Consensus 3 P~~~~rp---FD~~-------------------adG~v-------~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~d 53 (205)
T d1tqya2 3 PEHASRP---FDGT-------------------RDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCN 53 (205)
T ss_dssp GGGCCCT---TBTT-------------------CCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC
T ss_pred CCCCCCC---ccCC-------------------CCCEe-------eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEcccc
Confidence 4678899 8887 88998 69999999999999999999999999999998876
Q ss_pred CCCc-----cccchHHHHHHHHHHcCCCCCCCceeeccccchhH-----HHHHHHHcCCCCCCcCCCCCccccCCCccch
Q 015003 296 APEW-----FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV-----AIANQKLLGLDPEQVNAHGGAVSLGHPLGCS 365 (414)
Q Consensus 296 ~~~~-----~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~-----~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gas 365 (414)
.... ......++++++|++++++++||++|+.|-..+.. ...+.+.++-...++.++.-|..+||+.+++
T Consensus 54 g~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~As 133 (205)
T d1tqya2 54 AYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAI 133 (205)
T ss_dssp SSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTH
T ss_pred ccccCcccccccccchhhhhHHhhhcCCccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeeccccccccccc
Confidence 4322 12334688999999999999999999999888865 2223444554445677888899999999999
Q ss_pred HHHHHHHHHHHHHhc---------------------------CCCeeEEeecccccceeeEEEEEec
Q 015003 366 GARILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 366 G~~~l~~~~~ql~~~---------------------------~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
|+..++.++++|+.+ ..++.+.+.++.||+++++||+..+
T Consensus 134 G~~~li~~~~~l~~g~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 134 GSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp HHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred chhHHHHHHHHHhCCeEcccCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEeeCC
Confidence 999999999999865 2346678888999999999998654
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.66 E-value=4.3e-17 Score=145.04 Aligned_cols=95 Identities=14% Similarity=0.020 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeE-ccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTI-NKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v-~~aC~s~~~al~~A~~~I~ 114 (414)
...+|+.+|+++||+++|++|+|||.||++++++ +..|..+..++.+||+++++..+++ +++|++++++|..|..+|+
T Consensus 74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~-~~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~ 152 (200)
T d1u0ma1 74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCT 152 (200)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCC-CCcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHH
Confidence 5778999999999999999999999999988775 4578899999999999878889998 5799999999999999999
Q ss_pred cCCCCeEEEEecccCCC
Q 015003 115 LGINDIVVAGGMESMSN 131 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (414)
+|..+.|||+++|.+|.
T Consensus 153 ~~~~~~vLvv~~e~~S~ 169 (200)
T d1u0ma1 153 AYPEANALIVACEFCSL 169 (200)
T ss_dssp HSTTCEEEEEEEEEGGG
T ss_pred hCCCCEEEEEEEecccc
Confidence 99999999999999875
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.59 E-value=2.2e-15 Score=138.54 Aligned_cols=95 Identities=22% Similarity=0.244 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
...|+..++++||+|+|+++++.+. +++|+..... ....++..|+..+|+
T Consensus 72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 151 (250)
T d2gfva1 72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence 4578999999999999998776663 6666544221 011257789999999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCch
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPK 134 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~ 134 (414)
+ +|+++++++|+|++.||.+|+.+|++|++|++||+|+|.... |+
T Consensus 152 ~--Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~ 196 (250)
T d2gfva1 152 R--GPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PL 196 (250)
T ss_dssp C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH
T ss_pred C--CCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcC-cH
Confidence 4 899999999999999999999999999999999999998765 43
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.57 E-value=3.9e-15 Score=136.80 Aligned_cols=94 Identities=27% Similarity=0.384 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
....|+..++.+||+|||+++++++ .+++|+..+.. .....+..++..+|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 3456799999999999999987766 57787654431 01225668999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
++ +|+++++++|+|++.||.+|+.+|++|++|++||+|+|....
T Consensus 150 l~--Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~ 193 (249)
T d1j3na1 150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193 (249)
T ss_dssp CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred CC--CCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhC
Confidence 94 899999999999999999999999999999999999998665
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.55 E-value=3e-15 Score=129.04 Aligned_cols=107 Identities=15% Similarity=0.124 Sum_probs=94.8
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEccCCchH
Q 015003 23 TPMGGFLGSLSSVSATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTINKVCSSG 102 (414)
Q Consensus 23 t~~~~~~~~~~~~~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~~aC~s~ 102 (414)
|++.+++-..++++..+|+.+|++++|++. ++++||.+++++.++++..+..+..++..||+++.+.+|++..+|+++
T Consensus 36 ~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~ 113 (166)
T d1xpma1 36 IGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAA 113 (166)
T ss_dssp TCCSEEEECCTTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTH
T ss_pred cCcEEEEeCCCccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccccchhHHHHHHhhccccceEEeeecccHHHH
Confidence 445455445567899999999999999876 478999999999999888899999999999998778999999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 103 MKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 103 ~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
+++|..|..+|++|..+.+||+++|..+.
T Consensus 114 ~~al~~A~~~i~~~~~~~alvV~sd~~~~ 142 (166)
T d1xpma1 114 TPAIQLAKDYLATRPNEKVLVIATDTARY 142 (166)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEEEEECC
T ss_pred HHHHHHHhhHHhcCCCCeEEEEEEceEec
Confidence 99999999999999999999999997553
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.54 E-value=2.8e-14 Score=129.65 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceee-EccCCchHHHHHHHHHHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT-INKVCSSGMKAVMLAAQSIQ 114 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~-v~~aC~s~~~al~~A~~~I~ 114 (414)
+..+|+.+|+++||+++|++++|||.||++++++... +.+...+...+++.+++..+. ++.+|++++++|..|..+|+
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~-p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~ 179 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS-SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc-CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999988664 445556667777655666665 47899999999999999999
Q ss_pred cCCCCeEEEEecccCCC
Q 015003 115 LGINDIVVAGGMESMSN 131 (414)
Q Consensus 115 sG~~~~vLv~g~e~~s~ 131 (414)
+|.++.|||+++|..|.
T Consensus 180 ~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 180 NNKGARVLVVCSEVTAV 196 (235)
T ss_dssp TSTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEeeecce
Confidence 99999999999999876
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.50 E-value=7.2e-14 Score=127.95 Aligned_cols=93 Identities=17% Similarity=0.219 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCCC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAGI 86 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lgl 86 (414)
...++.+++.+||++||++++.+. .+++|+..... .....+..++..+|+
T Consensus 72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (250)
T d1e5ma1 72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence 346899999999999999876554 36777643321 011257788889999
Q ss_pred CCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 87 PNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 87 ~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
.+|+++++++|+|++.||.+|..+|++|++|.+||+|+|....
T Consensus 152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~ 194 (250)
T d1e5ma1 152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT 194 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred --CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcC
Confidence 4899999999999999999999999999999999999998655
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=8.5e-13 Score=120.85 Aligned_cols=93 Identities=26% Similarity=0.298 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC-----eEEEEeecCCC---------------------------CCCcHHHHHHHHC
Q 015003 37 ATKLGSIAIECALKRANVKPLLVQ-----EVFFGNVLSAN---------------------------LGQAPARQAALGA 84 (414)
Q Consensus 37 ~~~L~~~A~~~AL~dAgi~~~~Id-----~vi~g~~~~~~---------------------------~~~~~a~~va~~l 84 (414)
...+...+..+|+.++++..+..+ .+++|+..+.. .....+..|+..+
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 150 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence 355889999999999998754321 35565543320 0112567899999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCC
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSN 131 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~ 131 (414)
|+ ++|+++++++|+|++.||.+|+++|++|++|++||+|+|....
T Consensus 151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~ 195 (253)
T d2vbaa1 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW 195 (253)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhc
Confidence 99 4899999999999999999999999999999999999997654
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.35 E-value=2.3e-12 Score=118.74 Aligned_cols=97 Identities=23% Similarity=0.254 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-----cCeEEEEeecCC--------------------------CCCCcHHHHHHHHC
Q 015003 36 SATKLGSIAIECALKRANVKPLL-----VQEVFFGNVLSA--------------------------NLGQAPARQAALGA 84 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~-----Id~vi~g~~~~~--------------------------~~~~~~a~~va~~l 84 (414)
.....+..|..+|+.+++....+ ...+........ ......+..|+..+
T Consensus 87 ~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 166 (270)
T d2ix4a1 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (270)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHh
Confidence 34566788888999998864322 122333322211 01122677899999
Q ss_pred CCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchh
Q 015003 85 GIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKY 135 (414)
Q Consensus 85 gl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~ 135 (414)
|+ ++|+++++++|+|++.||.+|+.+|++|++|.+||+|+|.... |..
T Consensus 167 ~l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~-p~~ 214 (270)
T d2ix4a1 167 GF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID-ALS 214 (270)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH
T ss_pred CC--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhh-hhh
Confidence 99 4899999999999999999999999999999999999998765 433
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.28 E-value=1.1e-11 Score=105.16 Aligned_cols=121 Identities=20% Similarity=0.308 Sum_probs=96.6
Q ss_pred cceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HHHH-HHHcCCCCCCcCC
Q 015003 282 QVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIAN-QKLLGLDPEQVNA 351 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~~~-~e~lGl~~~~vn~ 351 (414)
++|++|.|++...|... ..+.+..++++++|+++|++++|||+++.|-..+.. +... .+.|| +++.+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg---~~~~v 77 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG---KEVPV 77 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC---SSSEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC---CcccC
Confidence 36899999999987533 223345689999999999999999999999888764 2222 33455 45677
Q ss_pred CCCccccCCCccchHHHHHHHHHHHHHhc---------------------------CCCeeEEeecccccceeeEEEEEe
Q 015003 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+.-|..+||+.+++|+..++.++.+|+.+ ..++.+..+++.||+++++||++.
T Consensus 78 ~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 78 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 88899999999999999999999999875 224567888999999999999975
Q ss_pred c
Q 015003 405 Q 405 (414)
Q Consensus 405 ~ 405 (414)
+
T Consensus 158 ~ 158 (158)
T d1ox0a2 158 E 158 (158)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.26 E-value=1.1e-11 Score=105.72 Aligned_cols=123 Identities=17% Similarity=0.199 Sum_probs=98.0
Q ss_pred cceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HHHHH-HHcCCCCCCcCC
Q 015003 282 QVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIANQ-KLLGLDPEQVNA 351 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~~~~-e~lGl~~~~vn~ 351 (414)
|+|++|.|++...|... +.+.+..++++++|+++|++++|||+++.|-..+.. +...+ +.|+-...++.+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 57899999999987432 223455789999999999999999999999888764 33333 335534446778
Q ss_pred CCCccccCCCccchHHHHHHHHHHHHHhc---------------------------CCCeeEEeecccccceeeEEEEEe
Q 015003 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~---------------------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+.-|..+||+.+++|+..++.++++++.+ ..++.+..+++.||+++++||+..
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~y 160 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEeee
Confidence 88899999999999999999999999865 134567888999999999999863
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=1.5e-11 Score=104.89 Aligned_cols=123 Identities=24% Similarity=0.332 Sum_probs=97.8
Q ss_pred cceEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HHH-HHHHcCCCCCCcCC
Q 015003 282 QVIAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIA-NQKLLGLDPEQVNA 351 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~ 351 (414)
|+|+.|.|++...|... ..+.+...+++++|+++|++++|||+++.|-..+.. +.. +.+.|+-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 57899999999887532 223345789999999999999999999999888764 222 33445544456778
Q ss_pred CCCccccCCCccchHHHHHHHHHHHHHhc----------------------------CCCeeEEeecccccceeeEEEEE
Q 015003 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK----------------------------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------------------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+.-|..+||+.+++|+..++.++++|+.+ ..++.+..+++.||+++.+|||.
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 88899999999999999999999999865 22456778899999999999986
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
.
T Consensus 161 ~ 161 (161)
T d2gfva2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.25 E-value=9e-12 Score=105.96 Aligned_cols=123 Identities=23% Similarity=0.394 Sum_probs=96.5
Q ss_pred cceEEEEEEEEeecC-----CCccccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HHH-HHHHcCCCCCCcCC
Q 015003 282 QVIAKIRGFADAAQA-----PEWFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIA-NQKLLGLDPEQVNA 351 (414)
Q Consensus 282 ~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~~-~~e~lGl~~~~vn~ 351 (414)
|+|+.|.|++.+.|. +...+.....+++++|+++|++++|||+++.|-..+.. +.. +.+.|+-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 578999999998874 23333456789999999999999999999999888864 222 22333322335667
Q ss_pred CCCccccCCCccchHHHHHHHHHHHHHhc--------------------------CCCeeEEeecccccceeeEEEEEe
Q 015003 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK--------------------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~--------------------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+..|..+||+.+++|+..++.++.+|+.+ ..++.+..+++.||+++.+|||++
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~kv 159 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKRV 159 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEECC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEEC
Confidence 78899999999999999999999999865 235567888999999999999964
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.11 E-value=1.6e-10 Score=98.21 Aligned_cols=121 Identities=18% Similarity=0.253 Sum_probs=93.2
Q ss_pred eEEEEEEEEeecCCC-----ccccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HHH-HHHHcCCC--CCCcCC
Q 015003 284 IAKIRGFADAAQAPE-----WFTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AIA-NQKLLGLD--PEQVNA 351 (414)
Q Consensus 284 ~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~~-~~e~lGl~--~~~vn~ 351 (414)
|++|.|++...|... ..+.....+++++|++++++++|||+++.|-..+.. +.. +.+.++-. ..++.+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 589999999887532 222334578999999999999999999999887764 222 23334421 235677
Q ss_pred CCCccccCCCccchHHHHHHHHHHHHHhc----------------------------CCCeeEEeecccccceeeEEEEE
Q 015003 352 HGGAVSLGHPLGCSGARILVTLLGVLRHK----------------------------KGKYGVGGICNGGGGASALVLEL 403 (414)
Q Consensus 352 ~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~----------------------------~~~~~l~~~~~~gg~~~a~vl~~ 403 (414)
+..|..+||+.+++|+..++.++++|+.+ ..++.+..+++.||+++.+||+.
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 88899999999999999999999999865 23456788899999999999986
Q ss_pred e
Q 015003 404 M 404 (414)
Q Consensus 404 ~ 404 (414)
+
T Consensus 161 ~ 161 (161)
T d2ix4a2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.01 E-value=3.7e-10 Score=100.41 Aligned_cols=98 Identities=20% Similarity=0.317 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC--------------------------------CCcHHHH
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQE----VFFGNVLSANL--------------------------------GQAPARQ 79 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id~----vi~g~~~~~~~--------------------------------~~~~a~~ 79 (414)
+...|+..|+++||+|||+++++++. +++++..+... ...++..
T Consensus 70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 149 (216)
T d1tqya1 70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 149 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence 45679999999999999999877654 44444332110 0125678
Q ss_pred HHHHCCCCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhh
Q 015003 80 AALGAGIPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYL 136 (414)
Q Consensus 80 va~~lgl~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~ 136 (414)
++..+|+ .+|.++++++|+|+++||.+|..+|++|++|++||+|+|.... |..+
T Consensus 150 ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~-p~~~ 203 (216)
T d1tqya1 150 VAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVV 203 (216)
T ss_dssp HHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH
T ss_pred HHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH
Confidence 9999999 4899999999999999999999999999999999999998765 5444
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.99 E-value=6.8e-10 Score=92.85 Aligned_cols=97 Identities=24% Similarity=0.167 Sum_probs=86.0
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCe
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~ 384 (414)
.++++++|+++|++++|||++.+||++......+++.||++++++..+ ....+||+.++|-...+.+++++-+.+++++
T Consensus 51 ~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~-~~~~~GNt~sasip~~L~~a~~~g~i~~Gd~ 129 (148)
T d1u6ea2 51 GDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVAN-DIEHTGNTSAASIPLAMAELLTTGAAKPGDL 129 (148)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC-THHHHCBCGGGHHHHHHHHHHHHTSSCTTCE
T ss_pred HHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhh-hHHhhCCCccchHHHHHHHHHHcCCCCCCCE
Confidence 578999999999999999999999999999999999999999886654 2456899999999999999988877778888
Q ss_pred eEEeecccccceeeEEEE
Q 015003 385 GVGGICNGGGGASALVLE 402 (414)
Q Consensus 385 ~l~~~~~~gg~~~a~vl~ 402 (414)
.+...+++|-+++++||+
T Consensus 130 vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 130 ALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred EEEEEEchhhhheEEEEe
Confidence 888888888888899886
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.94 E-value=9e-10 Score=97.31 Aligned_cols=98 Identities=22% Similarity=0.290 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC--------------------------CCCcHHHHHHHHCC
Q 015003 36 SATKLGSIAIECALKRANVKPLLVQ----EVFFGNVLSAN--------------------------LGQAPARQAALGAG 85 (414)
Q Consensus 36 ~~~~L~~~A~~~AL~dAgi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~lg 85 (414)
....|+..|+.+||+++|+++++++ .+++|+..+.. .....+.+++..+|
T Consensus 69 ~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 148 (208)
T d1tqyb1 69 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 148 (208)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred cccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhccc
Confidence 4567999999999999999988876 36777654311 00125678999999
Q ss_pred CCCCcceeeEccCCchHHHHHHHHHHHHHcCCCCeEEEEecccCCCCchhhh
Q 015003 86 IPNSVVCTTINKVCSSGMKAVMLAAQSIQLGINDIVVAGGMESMSNAPKYLA 137 (414)
Q Consensus 86 l~~~~~~~~v~~aC~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~p~~~~ 137 (414)
++ +|+++++++|+|++.||..|+++|++| +|++||+|+|.... |..+.
T Consensus 149 l~--Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~-p~~~~ 196 (208)
T d1tqyb1 149 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PWGWV 196 (208)
T ss_dssp CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HHHHH
T ss_pred cc--ceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccC-HHHHH
Confidence 94 899999999999999999999999999 89999999998665 65543
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.94 E-value=1e-09 Score=91.95 Aligned_cols=98 Identities=23% Similarity=0.148 Sum_probs=88.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCe
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~ 384 (414)
.++++++|+++|++++|||+|.+|+++..+...+.+.||++++++..+ ...+||+.++|-...+.++.++-+.+++++
T Consensus 50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~--~~~~Gn~~sasip~~L~~~~~~~~~~~Gd~ 127 (149)
T d1ub7a2 50 NTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREGDH 127 (149)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCE
T ss_pred HHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHH--HHHhcCCcchhHHHHHHHHHHcCCCCCCCE
Confidence 478999999999999999999999999999999999999999988766 566899999999988888888877788888
Q ss_pred eEEeecccccceeeEEEEEe
Q 015003 385 GVGGICNGGGGASALVLELM 404 (414)
Q Consensus 385 ~l~~~~~~gg~~~a~vl~~~ 404 (414)
.+...++.|-++.++||+..
T Consensus 128 vll~g~G~G~s~ga~llrw~ 147 (149)
T d1ub7a2 128 VLLVSFGAGLTWAAAVLTWG 147 (149)
T ss_dssp EEEEEEETTTEEEEEEEECC
T ss_pred EEEEEEchHhhhEEEEEEEC
Confidence 88888888889999999865
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=3.8e-09 Score=87.70 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=85.5
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCe
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~ 384 (414)
.+.++++|+++|++++|||++.+||++......+.+.||++++++..+ ...+||+..++-...+.+++++-+.+.+++
T Consensus 47 ~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~--~~~~GN~~sasip~~L~~~~~~~~~~~Gd~ 124 (143)
T d1hnja2 47 AHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDGRIKPGQL 124 (143)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCE
T ss_pred hHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhh--hhhhcccccchHHHHHHHHHHhCCCCCCCE
Confidence 578999999999999999999999999999999999999999988765 567899999998888888888777778888
Q ss_pred eEEeecccccceeeEEEE
Q 015003 385 GVGGICNGGGGASALVLE 402 (414)
Q Consensus 385 ~l~~~~~~gg~~~a~vl~ 402 (414)
.+...++.|-++++++|+
T Consensus 125 vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 125 VLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred EEEEEEehhhhhEEEEEE
Confidence 888888888888888886
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=1.6e-08 Score=84.52 Aligned_cols=116 Identities=19% Similarity=0.277 Sum_probs=86.9
Q ss_pred eEEEEEEEEeecCCCc---cccchHHHHHHHHHHcCCCCCCCceeeccccchhH----HH-HHHHHcCCCCCCcCCCCCc
Q 015003 284 IAKIRGFADAAQAPEW---FTTAPSLAIPKAIANAGLEASQIDYYEINEAFSVV----AI-ANQKLLGLDPEQVNAHGGA 355 (414)
Q Consensus 284 ~~~i~g~~~~~~~~~~---~~~~~~~a~~~al~~aGl~~~DId~~~~hd~~~~~----~~-~~~e~lGl~~~~vn~~Gg~ 355 (414)
|++|.|++.+.|..+. ...+..++++++++.+ +.|||+++.|-..+.. +. .+.+.||- .++.++.-|
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~--~~~~v~s~K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD--KSPAISATK 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT--CCCEEECTH
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC--CCcccccch
Confidence 5899999998875322 2234567888888755 5799999999877753 22 23444553 345556779
Q ss_pred cccCCCccchHHHHHHHHHHHHHhc---------------------------CCCeeEEeecccccceeeEEEEEe
Q 015003 356 VSLGHPLGCSGARILVTLLGVLRHK---------------------------KGKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 356 ~~~Gh~~gasG~~~l~~~~~ql~~~---------------------------~~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
..+||+.+++|+..++.++++|+.+ ..++.+..+++.||+++++|||++
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~v 151 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 151 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred hhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEEC
Confidence 9999999999999999999999865 124557888999999999999974
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.76 E-value=9.7e-09 Score=86.12 Aligned_cols=100 Identities=19% Similarity=0.052 Sum_probs=84.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhcCCCe
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHKKGKY 384 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~~~~~ 384 (414)
.++++++|+++|++.+|||+|.+|+.+..+...+.+.||++++++... ....+||+.++|-...+.++.++-+.+.+++
T Consensus 51 p~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~-~~~~~GNt~Sasip~~L~~~~~~~~~~~Gd~ 129 (153)
T d1mzja2 51 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR-DAEDTGNTSSASVALALDRLVRSGAVPGGGP 129 (153)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC-THHHHCBCTTHHHHHHHHHHHHHTSSCTTCE
T ss_pred HHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh-hhhhcCCcccchHHHHHHHHHHcCCCCCCCE
Confidence 478999999999999999999999999999999999999999886332 2456899999998888888888777777888
Q ss_pred eEEeecccccceeeEEEEEec
Q 015003 385 GVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 385 ~l~~~~~~gg~~~a~vl~~~~ 405 (414)
.+...++.|-++++++|+..+
T Consensus 130 ill~~fG~G~s~~~~~l~~~~ 150 (153)
T d1mzja2 130 ALMIGFGAGLSYAGQALLLPD 150 (153)
T ss_dssp EEEEEEETTTEEEEEEEECCC
T ss_pred EEEEEEchhhhhhEEEEEecC
Confidence 888777877788888887654
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.56 E-value=2.1e-08 Score=83.52 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCC-CccccCCCccchHHHHHHHHHHHHHhcCC
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~ql~~~~~ 382 (414)
..+.++++|+++|++++|||+|.+|+.+......+.+.||++++++..+- -..-+||...+|-...+.++.++-+.+.+
T Consensus 45 ~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~~~~~~G 124 (148)
T d1u0ma2 45 LAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEG 124 (148)
T ss_dssp HHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSS
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHcCCCCCC
Confidence 35789999999999999999999999999999999999999999875431 13457999999977777777765555667
Q ss_pred CeeEEeecccccceeeEEEEEec
Q 015003 383 KYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 383 ~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
++.+...++.|-+..+++++...
T Consensus 125 d~ill~gfG~G~s~~~~llrW~~ 147 (148)
T d1u0ma2 125 ARGLLAGFGPGITAEMSLGCWQT 147 (148)
T ss_dssp CCCEEEEEETTTEEEEEEEEEEC
T ss_pred CEEEEEEEchHhEeeEEEEEEcc
Confidence 88888888888888999998753
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=98.25 E-value=1.1e-06 Score=73.56 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCC-CccccCCCccchHHHHHHHHHHHHHhcCC
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHG-GAVSLGHPLGCSGARILVTLLGVLRHKKG 382 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~G-g~~~~Gh~~gasG~~~l~~~~~ql~~~~~ 382 (414)
..+.++++|+++|++.+|||++.+|+.+......+.+.||++++++..+- -+..+||+..+|-...+.++...-...++
T Consensus 49 v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~ 128 (160)
T d1ee0a2 49 IENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGK 128 (160)
T ss_dssp HHHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCC
Confidence 35788999999999999999999999999999999999999999875541 24468999999988888888776554432
Q ss_pred -------CeeEEeecccccceeeEEEEEe
Q 015003 383 -------KYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 383 -------~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
+.++..++|.|=+..+++|++.
T Consensus 129 ~~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 129 STTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp SBTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 4577877888888899999875
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.22 E-value=1.3e-06 Score=72.72 Aligned_cols=101 Identities=17% Similarity=0.110 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHHHHhcC-
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGVLRHKK- 381 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~ql~~~~- 381 (414)
..+.++++|+++|++.+|||++.+|+.+......+.+.||++++++..+-- +..+||+.++|-...+.++.++-...+
T Consensus 44 i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~ 123 (154)
T d1bi5a2 44 ITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGL 123 (154)
T ss_dssp HHHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCC
Confidence 357889999999999999999999999999999999999999998765422 446899999998888888777654332
Q ss_pred ------CCeeEEeecccccceeeEEEEEe
Q 015003 382 ------GKYGVGGICNGGGGASALVLELM 404 (414)
Q Consensus 382 ------~~~~l~~~~~~gg~~~a~vl~~~ 404 (414)
.++++..++|.|=+..+++|+..
T Consensus 124 ~~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 124 KTTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp SBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred cccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 25567877888878889999875
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=98.21 E-value=1.2e-06 Score=73.07 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCCCcCCCCC-ccccCCCccchHHHHHHHHHHHHHhc--
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPEQVNAHGG-AVSLGHPLGCSGARILVTLLGVLRHK-- 380 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~~vn~~Gg-~~~~Gh~~gasG~~~l~~~~~ql~~~-- 380 (414)
..+.++++|+++|++.+|||++.+|+.+......+.+.||++++++..+-- ...+||+.++|-...+.++.++...+
T Consensus 45 i~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~ 124 (156)
T d1u0ua2 45 IENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGC 124 (156)
T ss_dssp HHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccC
Confidence 357889999999999999999999999999999999999999998765422 34689999999888777777665432
Q ss_pred -----CCCeeEEeecccccceeeEEEEEec
Q 015003 381 -----KGKYGVGGICNGGGGASALVLELMQ 405 (414)
Q Consensus 381 -----~~~~~l~~~~~~gg~~~a~vl~~~~ 405 (414)
++++++..++|.|=+..++||+...
T Consensus 125 ~~~~~~~~~~~~~gfG~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 125 STTGEGLEMGVLFGFGPGLTIETVVLKSVP 154 (156)
T ss_dssp SBSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred CCcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence 3466788778888888899998764
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.53 E-value=0.047 Score=45.05 Aligned_cols=95 Identities=27% Similarity=0.277 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.+. +........+.+.||+.. ... +--..+++|.. .+.-+...+
T Consensus 55 a~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~--~~~------~di~~~C~g~~~al~~A~~~i 126 (174)
T d1hnja1 55 GFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG--CPA------FDVAAACAGFTYALSVADQYV 126 (174)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCS--SCE------EEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCc--hhh------hhhhhhhccHHHHHHHHHHHH
Confidence 3689999999999999999999742 334556667789999853 111 11122444444 444444555
Q ss_pred HhcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 378 RHKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 378 ~~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
+.+..++.|+.. ...|...++++|+..+.
T Consensus 127 ~sg~~~~~Lvv~~e~~S~~~~~~d~~~~~lfGDgA~A~vl~~~~~ 171 (174)
T d1hnja1 127 KSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEE 171 (174)
T ss_dssp HTTSCSEEEEEEEECHHHHSCTTCHHHHTTBCCEEEEEEEEEESS
T ss_pred hcCCcceeEEEeeehhhcccCCCCCCeEEEeceeeEEEEEEeCCC
Confidence 555566666443 23355667888887653
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.44 E-value=0.031 Score=44.98 Aligned_cols=84 Identities=12% Similarity=-0.041 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceee-E---c-cCCchHHHHHHHHHHHH
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTT-I---N-KVCSSGMKAVMLAAQSI 113 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~-v---~-~aC~s~~~al~~A~~~I 113 (414)
....++++++|+++|++++|||.+++= ......-..++..||++++....+ + . ++++|-..+|..+...=
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~H-----qa~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~g 122 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPH-----QANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 122 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEC-----CSCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEec-----cccHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHcC
Confidence 445678899999999999999998862 223445667889999976543333 2 2 22333344565555442
Q ss_pred HcCCCCeEEEEecc
Q 015003 114 QLGINDIVVAGGME 127 (414)
Q Consensus 114 ~sG~~~~vLv~g~e 127 (414)
+-..-|.+|++++-
T Consensus 123 ~i~~Gd~vll~gfG 136 (148)
T d1u6ea2 123 AAKPGDLALLIGYG 136 (148)
T ss_dssp SSCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEEEc
Confidence 22234777776654
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=95.17 E-value=0.031 Score=47.36 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHHHHhc
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 380 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~ql~~~ 380 (414)
.++++++|+++|++++|||++... +........+..+||+.+.-.... ..+...++++..+..+...++.+
T Consensus 80 ~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~~-----i~~~gC~g~~~al~~A~~~l~~~ 154 (200)
T d1u0ma1 80 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIP-----IAQLGCAAGGAAINRAHDFCTAY 154 (200)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEE-----ECSCGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEec-----cccchhhHHHHHHHHHHHHHHhC
Confidence 689999999999999999999842 233344566688899876322111 12333444555566666667766
Q ss_pred CCCeeEEe
Q 015003 381 KGKYGVGG 388 (414)
Q Consensus 381 ~~~~~l~~ 388 (414)
..++.|++
T Consensus 155 ~~~~vLvv 162 (200)
T d1u0ma1 155 PEANALIV 162 (200)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEEE
Confidence 66666644
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.05 E-value=0.028 Score=52.29 Aligned_cols=96 Identities=23% Similarity=0.232 Sum_probs=61.6
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccc----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccc-hHHHHHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINE----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGC-SGARILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~ga-sG~~~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++..-- ..+...-.+.+.||+.+.-.... ..+ .|| +++..+..+...++.
T Consensus 97 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~-----~~~-~gC~g~~~aL~~A~~~l~s 170 (372)
T d1teda_ 97 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVV-----VNF-MGCAAAMNALGTATNYVRA 170 (372)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE-----EES-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEee-----ccc-cCccHHHHHHHHHHHHHhc
Confidence 6899999999999999999998431 12344566789999876322111 112 234 444455556666776
Q ss_pred cCCCeeEEeec--------------------ccccceeeEEEEEecc
Q 015003 380 KKGKYGVGGIC--------------------NGGGGASALVLELMQA 406 (414)
Q Consensus 380 ~~~~~~l~~~~--------------------~~gg~~~a~vl~~~~~ 406 (414)
+..++.|++.. ..|...+++||+..+.
T Consensus 171 g~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~ 217 (372)
T d1teda_ 171 HPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQV 217 (372)
T ss_dssp STTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECT
T ss_pred CCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCc
Confidence 76777765432 2355667888887654
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=94.63 E-value=0.069 Score=43.91 Aligned_cols=94 Identities=15% Similarity=0.095 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHcCCCCCCCceeecc-----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHHHHHHHHHH-H
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEIN-----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGV-L 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~h-----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~~l~~~~~q-l 377 (414)
..++++++|+++|++++|||++.+. .........+.+.||... . .+-...+++|.....+.... +
T Consensus 53 a~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~--~-------~~di~~~C~g~~~al~~a~~~~ 123 (172)
T d1ub7a1 53 AFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKA--F-------AYDLLAGCPGWIYALAQAHALV 123 (172)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCC--E-------EEEEECSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccCc--c-------ceeehhccccHHHHHHHHhhhh
Confidence 3688999999999999999999843 233344556678898432 1 22333456665544444443 4
Q ss_pred HhcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 378 RHKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 378 ~~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
+.+..++.|+.. ...|...+++||+..+.
T Consensus 124 ~~~~~~~~Lvv~~e~~S~~~~~~d~~~~~lfGDgAaA~ll~~~~~ 168 (172)
T d1ub7a1 124 EAGLAQKVLAVGAEALSKIIDWNDRATAVLFGDGGGAAVVGKVRE 168 (172)
T ss_dssp HTTSCSEEEEEEEECGGGTSCTTCHHHHTTBCCEEEEEEEECCCT
T ss_pred hcCCcceeEEecccccccccCCCCcCeEEEecceeEEEEEEEcCC
Confidence 444456665333 23355667788877653
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=94.39 E-value=0.065 Score=42.97 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc-cCCchHHHHHHHHHHHHHcC--
Q 015003 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN-KVCSSGMKAVMLAAQSIQLG-- 116 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~-~aC~s~~~al~~A~~~I~sG-- 116 (414)
..-++++++|+++|++++|||.+++= .........++..|++++..-..++. .|+.++.+-...-..+++.|
T Consensus 48 ~vp~~i~~~L~~~g~~~~dId~~i~H-----qa~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~~ 122 (149)
T d1ub7a2 48 VMNTATLEAIEKAGLTPEDIRLFVPH-----QANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGRI 122 (149)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEC-----CSCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHhhccccccccEEEee-----ccchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCCC
Confidence 34578889999999999999998762 22344666788899997654333332 23233322222233344443
Q ss_pred -CCCeEEEEeccc
Q 015003 117 -INDIVVAGGMES 128 (414)
Q Consensus 117 -~~~~vLv~g~e~ 128 (414)
.-|.+|++|+-.
T Consensus 123 ~~Gd~vll~g~G~ 135 (149)
T d1ub7a2 123 REGDHVLLVSFGA 135 (149)
T ss_dssp CTTCEEEEEEEET
T ss_pred CCCCEEEEEEEch
Confidence 347888877654
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=94.11 E-value=0.094 Score=45.40 Aligned_cols=77 Identities=23% Similarity=0.195 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCCCCCceeecc----ccchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHHHh
Q 015003 305 SLAIPKAIANAGLEASQIDYYEIN----EAFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVLRH 379 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~h----d~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql~~ 379 (414)
.++++++|+++|++++|||++.+. +......-.....+|+.+.-.... . +-.|++|.. .+.-+...++.
T Consensus 107 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~-----~-~~~~C~g~~~al~~A~~~i~~ 180 (235)
T d1bi5a1 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYM-----M-YQQGCFAGGTVLRLAKDLAEN 180 (235)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE-----E-ESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEe-----e-ecCccchHHHHHHHHHHHHHc
Confidence 589999999999999999999843 222333445667777655321111 1 233455544 44555555565
Q ss_pred cCCCeeEE
Q 015003 380 KKGKYGVG 387 (414)
Q Consensus 380 ~~~~~~l~ 387 (414)
+..++.|+
T Consensus 181 ~~~~~vLv 188 (235)
T d1bi5a1 181 NKGARVLV 188 (235)
T ss_dssp STTCEEEE
T ss_pred CCCCeEEE
Confidence 55666653
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=94.07 E-value=0.13 Score=42.54 Aligned_cols=95 Identities=20% Similarity=0.231 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHcCCCCCCCceeeccc-----cchhHHHHHHHHcCCCCCCcCCCCCccccCCCccchHHH-HHHHHHHHH
Q 015003 304 PSLAIPKAIANAGLEASQIDYYEINE-----AFSVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGAR-ILVTLLGVL 377 (414)
Q Consensus 304 ~~~a~~~al~~aGl~~~DId~~~~hd-----~~~~~~~~~~e~lGl~~~~vn~~Gg~~~~Gh~~gasG~~-~l~~~~~ql 377 (414)
..++++++|+++|++++|||++.... ........+.+.||... +.. ..+ +. +++|.. .+.-+...+
T Consensus 62 a~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~--~~~----~Dv-~~-~C~g~~~aL~~A~~~i 133 (181)
T d1mzja1 62 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADN--AGG----FDL-SA-ACAGFCHALSIAADAV 133 (181)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTT--CEE----EEE-EC-GGGHHHHHHHHHHHHH
T ss_pred hHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCC--ccc----eeH-Hh-hhccHHHHHHHHhCHh
Confidence 36899999999999999999987432 22333444567787542 111 112 22 344444 444454555
Q ss_pred HhcCCCeeEEee----------------cccccceeeEEEEEecc
Q 015003 378 RHKKGKYGVGGI----------------CNGGGGASALVLELMQA 406 (414)
Q Consensus 378 ~~~~~~~~l~~~----------------~~~gg~~~a~vl~~~~~ 406 (414)
+.+..++.|+.. ...|...+++||+..+.
T Consensus 134 ~~~~~~~~LvV~~e~~s~~~~~~d~~~~~lfGDGAaA~ll~~~~~ 178 (181)
T d1mzja1 134 ESGGSRHVLVVATERMTDVIDLADRSLSFLFGDGAGAAVVGPSDV 178 (181)
T ss_dssp HHSSCSCEEEEEEEEGGGGSCSSCTTTTTTBCEEEEEEEEEEESS
T ss_pred hcCCCceeEEeeeccccccCCCCCcceEEEeeeeeEEEEEEeCCC
Confidence 655556655333 22344567888887653
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=93.61 E-value=0.12 Score=41.05 Aligned_cols=81 Identities=14% Similarity=0.050 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCcceeeEc----cCCchHHHHHHHHHHHHHc
Q 015003 40 LGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTIN----KVCSSGMKAVMLAAQSIQL 115 (414)
Q Consensus 40 L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~~v~----~aC~s~~~al~~A~~~I~s 115 (414)
...++++++|+++|++++|||.+++= .........++..+|+++.....++. .+++|-..+|..+ ++.
T Consensus 45 ~~~~~i~~~L~~~g~~~~dId~~i~H-----q~~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~---~~~ 116 (143)
T d1hnja2 45 ELAHIVDETLAANNLDRSQLDWLVPH-----QANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---VRD 116 (143)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEC-----CSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred hhhHHHHHHHHHhhhcccccceEEec-----cCchHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHH---HHh
Confidence 44668889999999999999999762 22334566788999998643333332 2333333344444 444
Q ss_pred CC---CCeEEEEeccc
Q 015003 116 GI---NDIVVAGGMES 128 (414)
Q Consensus 116 G~---~~~vLv~g~e~ 128 (414)
|+ -|.+|.+|+-.
T Consensus 117 ~~~~~Gd~vll~g~G~ 132 (143)
T d1hnja2 117 GRIKPGQLVLLEAFGG 132 (143)
T ss_dssp TCSCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEeh
Confidence 43 37888877654
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=93.09 E-value=0.13 Score=41.36 Aligned_cols=85 Identities=13% Similarity=0.019 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCccee-eEc-cCCchHHHHHHHHHHHHHcC
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCT-TIN-KVCSSGMKAVMLAAQSIQLG 116 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~~~~-~v~-~aC~s~~~al~~A~~~I~sG 116 (414)
.-..++++++|+++|++++|||.+++= +.+......++..||+++..... .+. -|..++.+-...-..+++.|
T Consensus 48 ~~vp~~i~~~L~~~gl~~~dId~~i~H-----q~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~~ 122 (153)
T d1mzja2 48 ADVVPAAREALEVAGLTVGDLVAFVPH-----QANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSG 122 (153)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEC-----CSCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccCCEEEEc-----CCcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHcC
Confidence 445567888999999999999999862 22345667889999997543222 232 23222222222223344444
Q ss_pred C---CCeEEEEeccc
Q 015003 117 I---NDIVVAGGMES 128 (414)
Q Consensus 117 ~---~~~vLv~g~e~ 128 (414)
. -|.+|++++-.
T Consensus 123 ~~~~Gd~ill~~fG~ 137 (153)
T d1mzja2 123 AVPGGGPALMIGFGA 137 (153)
T ss_dssp SSCTTCEEEEEEEET
T ss_pred CCCCCCEEEEEEEch
Confidence 3 47888776643
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=91.09 E-value=0.42 Score=40.69 Aligned_cols=90 Identities=10% Similarity=-0.037 Sum_probs=61.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeeccccchhHHHHHHHHcCCCCC---------CcCCC-CCccccCCCccchHHHHHHHHH
Q 015003 305 SLAIPKAIANAGLEASQIDYYEINEAFSVVAIANQKLLGLDPE---------QVNAH-GGAVSLGHPLGCSGARILVTLL 374 (414)
Q Consensus 305 ~~a~~~al~~aGl~~~DId~~~~hd~~~~~~~~~~e~lGl~~~---------~vn~~-Gg~~~~Gh~~gasG~~~l~~~~ 374 (414)
..+.+...++.|.+.+|+|++.+|.+|..+.....+.|..... ++-++ --..-.|+...+|-...++.++
T Consensus 43 ~~~~~~~~~~~g~~~~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaSlyl~L~Sll 122 (221)
T d1xpma2 43 QQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL 122 (221)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHHHHHHHHhhh
Confidence 4667777888999999999999999999999988888754321 01100 0012369999999877888777
Q ss_pred HHHHhcCCCeeEEeeccccc
Q 015003 375 GVLRHKKGKYGVGGICNGGG 394 (414)
Q Consensus 375 ~ql~~~~~~~~l~~~~~~gg 394 (414)
.+-...+|++-+..+.|.|.
T Consensus 123 ~~~~~~~G~rIglfSYGSG~ 142 (221)
T d1xpma2 123 ENRDLQAGETIGLFSYGSGS 142 (221)
T ss_dssp HHSCCCTTCEEEEEEEETTT
T ss_pred ccccCCCCCEEEEEEecCCc
Confidence 65444466665554444443
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=84.40 E-value=0.43 Score=37.82 Aligned_cols=47 Identities=4% Similarity=-0.188 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCCcHHHHHHHHCCCCCCc
Q 015003 39 KLGSIAIECALKRANVKPLLVQEVFFGNVLSANLGQAPARQAALGAGIPNSV 90 (414)
Q Consensus 39 ~L~~~A~~~AL~dAgi~~~~Id~vi~g~~~~~~~~~~~a~~va~~lgl~~~~ 90 (414)
+-...+++++|+++|++++|||.+++= ..+......++..||+++..
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~H-----q~~~~i~~~i~~~Lgl~~~k 89 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVH-----AGGPRILDDLSTFLEVDPHA 89 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEE-----CSHHHHHHHHHHHSCSCGGG
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEEC-----CCCHHHHHHHHHHhCCChhh
Confidence 445688999999999999999987752 11234556788999997643
|