Citrus Sinensis ID: 015046

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----
Protein Sequence
MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHENSNSA
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHcccccccHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHEEEEEccccccHHHHHcHHHHccHHHHHHHHHHHEEEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHcccccccEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
mglfksevavcpsnlhcAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNvfgcllepatlptQYYMAMLYTLTTVILTAQTMYyshiyprlkhnkrpqtglmpnqpeaaektrpssngvgeqvnssgkwkidsdtsdtenfsipiplppfprngspgrelyYTSArslssshtptagsfiaqrmspshhsrisieepllgghistqsppstntktmlCLVPIMIFLTTFnfhysntehdtvfekpnkGFVIQVRRKLLQVSGgllqesvtggssgigSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNsvdwsrirpnlpwladaggcvlldSFILIQFIYYRYrsfqedkhensnsa
Flexible Loop (DISEMBL)
mglfksevavcpsnLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAaektrpssngvgeqvnssgkwkIDSDTSDTEnfsipiplppfprngsPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGllqesvtggssGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSfqedkhensnsa
Low Complexity Region (SEG)
MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHENSNSA
Disordered region (IsUnstruct)
*****SEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRL**************************************************************************************************************************KTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSF***********
Disordered Region (DISOPRED)
********AVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIY***************************************************************************************************************************NTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQV****************TGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYY****************
Disordered Region (DISEMBL)
MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPN********************************DTENFSIPIPLPPFPRNGSPGRELYYTSA********PTAGSFIA*********RISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQ**********
Disordered Region (DISPRO)
********AVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKH*************************************************************************************************************************TMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQ**VTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYR*************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHENSNSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	414	2.2.26 [Sep-21-2011]
Q12010	308	Uncharacterized membrane	yes	no	0.227	0.305	0.389	3e-13
P38279	296	Protein RTC2 OS=Saccharom	no	no	0.217	0.304	0.410	9e-13
Q95XZ6	311	Lysosomal amino acid tran	yes	no	0.205	0.273	0.388	3e-11
Q10482	271	Seven transmembrane prote	yes	no	0.195	0.298	0.409	8e-08
Q6ZP29	291	Lysosomal amino acid tran	yes	no	0.268	0.381	0.327	3e-07
Q5ZJX0	303	Lysosomal amino acid tran	no	no	0.217	0.297	0.347	1e-06
Q06328	317	Vacuolar integral membran	no	no	0.219	0.287	0.319	2e-06
Q8C4N4	293	Lysosomal amino acid tran	yes	no	0.280	0.395	0.314	3e-06
A1A4F0	135	Putative uncharacterized	no	no	0.214	0.659	0.367	4e-05

>sp|Q12010|YO092_YEAST Uncharacterized membrane protein YOL092W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL092W PE=1 SV=1

 Score = 77.0 bits (188), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)

Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
           +    G+  A +Y+G R+PQI LN +R   EG++ L F+FA +GN T++ S++V S+DW 
Sbjct: 211 MAQIFGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDWK 270

Query: 370 RIRPNLPWLADAGGCVLLDSFILIQ-FIYYRYRSF 403
            +  N  WL  + G + +D  I  Q FIY R + F
Sbjct: 271 YLIMNASWLVGSIGTLFMDFVIFSQFFIYKRNKKF 305

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P38279|RTC2_YEAST Protein RTC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTC2 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)

Query: 41  GLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYM 100
           G  S+  W V  VPQI  N++ +S EGLS+ F+  W+LGD+FNV G +++   LPT   +
Sbjct: 18  GSISICCWIVVFVPQIYENFRRQSAEGLSLLFIVLWLLGDIFNVMGAMMQ-NLLPTMIIL 76

Query: 101 AMLYTLTTVILTAQTMYYSH----IYPRLKHNKRP 131
           A  YTL  +IL  Q M+Y      I   +K N  P
Sbjct: 77  AAYYTLADLILLIQCMWYDKEKKSILQEVKKNVDP 111

Required for optimal growth in synthetic medium.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q95XZ6|LAAT1_CAEEL Lysosomal amino acid transporter 1 OS=Caenorhabditis elegans GN=laat-1 PE=1 SV=2

 Score = 70.5 bits (171), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 49/90 (54%)

Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
           +G  +G   A  Y GGR+PQI  N R    EGL+  MF   +  N TY  S+L+ +  W 
Sbjct: 200 LGYIIGSMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFYIIVAANFTYGISVLLATTSWL 259

Query: 370 RIRPNLPWLADAGGCVLLDSFILIQFIYYR 399
            +  +LPWLA + GC   D+ I+ Q+  YR
Sbjct: 260 YLLRHLPWLAGSLGCCCFDAVIISQYYLYR 289

Lysosomal lysine/arginine transporter that specifically mediates the export of lysine and arginine from lysosomes.

Caenorhabditis elegans (taxid: 6239)

>sp|Q10482|STM1_SCHPO Seven transmembrane protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=stm1 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 319 AAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILV--NSVDWSRIRPNLP 376
           + +Y   R+PQI  N +    EGL+ + FV A VGN +Y  SILV   S   +    NLP
Sbjct: 186 SVLYFCARIPQIIKNHKAKSTEGLSIIFFVLASVGNTSYAFSILVFPASDYLNYTYANLP 245

Query: 377 WLADAGGCVLLDSFILIQFIYYR 399
           W+  A   + LD +I  QFI YR
Sbjct: 246 WILGAFSTIFLDIYIFYQFIKYR 268

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q6ZP29|LAAT1_HUMAN Lysosomal amino acid transporter 1 homolog OS=Homo sapiens GN=PQLC2 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 11/122 (9%)

Query: 11  CPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTE-GLS 69
           CPS     +W    +  C     D  S+GLGL S++ +  +  PQ I  YK  + +  LS
Sbjct: 14  CPSG--SIQWIWDVLGECAQDGWDEASVGLGLISILCFAASTFPQFIKAYKTGNMDQALS 71

Query: 70  IAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNK 129
           + FL  WI GD  N+ G  L    LP Q Y A+ Y L  +++     YY       K   
Sbjct: 72  LWFLLGWIGGDSCNLIGSFLAD-QLPLQTYTAVYYVLADLVMLTLYFYY-------KFRT 123

Query: 130 RP 131
           RP
Sbjct: 124 RP 125

Homo sapiens (taxid: 9606)

>sp|Q5ZJX0|LAAT1_CHICK Lysosomal amino acid transporter 1 homolog OS=Gallus gallus GN=PQLC2 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNS---- 365
           IG  +G   + +Y+  RLPQI  N RR    G++ L+F   ++GN  Y  S+L+ +    
Sbjct: 189 IGFAIGSISSVLYLCSRLPQIYTNYRRKSTAGVSFLLFALVMLGNLLYGTSVLLKNPEPG 248

Query: 366 -VDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYR 399
             +   I  +LPWL  + G + LD  I  QF+ YR
Sbjct: 249 QSEGDYILHHLPWLIGSLGVLSLDVIISFQFLAYR 283

Gallus gallus (taxid: 9031)

>sp|Q06328|YD352_YEAST Vacuolar integral membrane protein YDR352W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR352W PE=1 SV=1

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 305 GGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASI--- 361
           G +S +G+ L W  A+ Y+G R+PQ+  N  R   +GL+P +F   L+ N TY  SI   
Sbjct: 179 GKNSQLGTILSWIGASFYVGARIPQLIKNYNRKSTDGLSPFLFATTLLCNITYNLSIFTS 238

Query: 362 ---LVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQF 395
              L N      I   LP++  + G +  D     Q+
Sbjct: 239 CRFLDNQNKREFIVNELPFIFGSAGTIAFDLIYFYQY 275

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q8C4N4|LAAT1_MOUSE Lysosomal amino acid transporter 1 homolog OS=Mus musculus GN=Pqlc2 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 6   SEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKST 65
           S  + CP+     +W       C     D  S+GLGL S++ +  +  PQ I   K  + 
Sbjct: 9   SNFSTCPNG--SVQWIWDVFGECAQDGWDEASVGLGLVSILCFAASTFPQYIKACKTGNM 66

Query: 66  E-GLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPR 124
           +  LS+ FL  WI GD  N+ G  L    LP Q Y A+ Y L  +++   T+Y+ +    
Sbjct: 67  DQALSLWFLLGWIGGDSCNLIGSFLADQ-LPLQTYTAVYYVLADLMML--TLYFHY---- 119

Query: 125 LKHNKRP 131
            K  KRP
Sbjct: 120 -KFKKRP 125

Mus musculus (taxid: 10090)

>sp|A1A4F0|CC055_HUMAN Putative uncharacterized protein C3orf55 OS=Homo sapiens GN=C3orf55 PE=2 SV=2

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 17/106 (16%)

Query: 55  QIITNYKE-KSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTA 113
           Q+   Y+  +  E +S+ FL  WI GDL N  GC L    LP Q + A+    T VI+ +
Sbjct: 29  QLFVAYRNGRVDEAVSLGFLDCWIGGDLTNFKGCYLTNQ-LPIQIFTAIFDMNTDVIILS 87

Query: 114 QTMYYSHIYPRLKHNKRPQTGLMPNQPE------AAEKTRPSSNGV 153
           Q MYY     RLK+ K+     M  QP+        EK R S  GV
Sbjct: 88  QFMYY-----RLKNQKKK----MIFQPQLFKDSITREKVRLSLWGV 124

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	414
224137504	403	predicted protein [Populus trichocarpa]	0.954	0.980	0.633	1e-142
449437964	420	PREDICTED: uncharacterized protein LOC10	0.980	0.966	0.598	1e-136
449511496	420	PREDICTED: uncharacterized protein LOC10	0.980	0.966	0.596	1e-135
224086677	366	predicted protein [Populus trichocarpa]	0.857	0.969	0.584	1e-127
359481322	406	PREDICTED: uncharacterized protein LOC10	0.961	0.980	0.568	1e-124
297827747	380	PQ-loop repeat family protein [Arabidops	0.857	0.934	0.592	1e-115
30688510	376	PQ loop repeat-containing protein [Arabi	0.852	0.938	0.576	1e-111
242056953	419	hypothetical protein SORBIDRAFT_03g01054	0.963	0.952	0.527	1e-110
356503326	387	PREDICTED: uncharacterized membrane prot	0.910	0.974	0.542	1e-110
357130326	418	PREDICTED: uncharacterized protein LOC10	0.910	0.901	0.538	1e-108

>gi|224137504|ref|XP_002322574.1| predicted protein [Populus trichocarpa] gi|222867204|gb|EEF04335.1| predicted protein [Populus trichocarpa]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/409 (63%), Positives = 315/409 (77%), Gaps = 14/409 (3%)

Query: 11  CPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSI 70
           CP   +C++WARIY++YCLCS++DGVSL LG+ SV+SWGVAE+PQIITNYKEKSTEGLS+
Sbjct: 4   CPQ--YCSQWARIYVKYCLCSMKDGVSLTLGVISVLSWGVAEIPQIITNYKEKSTEGLSL 61

Query: 71  AFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKR 130
           AFL TWI+GDLFNVFGC+LEPATLPTQYYMA+LYT+TT +LTAQT+YY HIY RLK N+R
Sbjct: 62  AFLLTWIIGDLFNVFGCMLEPATLPTQYYMAVLYTITTSVLTAQTIYYGHIYHRLKRNRR 121

Query: 131 PQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSD-TENFSIPIPLPPFPRNGS 189
                   + E A + R  ++  G QVN++GK + ++ + D T   S PIP P   +  S
Sbjct: 122 CI------KTEEAGRIRQGNSDAGAQVNNAGKQRNETASPDGTNGSSSPIPFPTLFQKSS 175

Query: 190 PGRELYYTSARSLSSSHTPTAGSFIAQRM-SPSHHSRISIEEPLLGGHISTQSPPSTNTK 248
           PGRELYY SARSLSSSHTP  GSF+AQR+ SPS   R SIE+PLLGG  +TQS P+ NTK
Sbjct: 176 PGRELYYMSARSLSSSHTPAVGSFLAQRVASPSFSMRNSIEDPLLGGDATTQSAPNLNTK 235

Query: 249 TMLCLVPIMIFLTTFNFHYS-NTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGS 307
           TMLC+V ++  L T N H S N      FE  ++GFVIQV RK+LQ S  +  E+ + G 
Sbjct: 236 TMLCVVSVVTLLGTLNLHQSANNRLARAFENKHQGFVIQVGRKILQASSRMSHENYSEG- 294

Query: 308 SGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVD 367
           SGIG++LGW+MAAIYMGGRLPQI LNI+RG+VEGLNPLMFVFAL+GN TYVASILV+SV 
Sbjct: 295 SGIGTFLGWSMAAIYMGGRLPQIFLNIKRGNVEGLNPLMFVFALIGNITYVASILVDSVA 354

Query: 368 WSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQ--EDKHENSNSA 414
           WS+I  NLPWL DAGGCVLLD+ IL+QF Y+R+R  Q  E+K  N NSA
Sbjct: 355 WSKISANLPWLVDAGGCVLLDTCILLQFAYFRHRRRQLLENKLLNCNSA 403

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437964|ref|XP_004136760.1| PREDICTED: uncharacterized protein LOC101209754 [Cucumis sativus]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/416 (59%), Positives = 315/416 (75%), Gaps = 10/416 (2%)

Query: 1   MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNY 60
           MG F+S   +CPSN HC+EW +  M+YCLC  +DGVSL LG+ SVISWGVAE+PQI+TNY
Sbjct: 1   MGSFQSSKPICPSNKHCSEWVKNNMKYCLCGTKDGVSLTLGMISVISWGVAEIPQIVTNY 60

Query: 61  KEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSH 120
           +EKS++GLS+AFL TWILGDLFNVFGC+LEPATLPTQYYMA+LYT+TT IL  Q +YY H
Sbjct: 61  REKSSDGLSLAFLLTWILGDLFNVFGCILEPATLPTQYYMALLYTITTGILFTQAIYYGH 120

Query: 121 IYPRLKHNKRPQTGLMPN----QPEAAEKTRPSSNGVG-EQVNSSGKWKIDSDTSDTENF 175
           IYP++K+ +R   GL+ +    Q +A +K + S   V   QVN+    K ++   ++ + 
Sbjct: 121 IYPQMKYRRRQCKGLVHSEANAQIDARDKAQQSYGSVNVNQVNNDDMSKFNTSKRESAST 180

Query: 176 SIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSH-HSRISIEEPLLG 234
           S PIPLP   +N S GRELYY SARSLS SHTPT+GSF+ Q+M+P + H+   ++EPLL 
Sbjct: 181 S-PIPLPMLRQNSSTGRELYYMSARSLSRSHTPTSGSFLRQKMTPPYIHN--PMQEPLLD 237

Query: 235 GHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYS-NTEHDTVFEKPNKGFVIQVRRKLLQ 293
           G+  + +P   N KTMLCLV ++ F +T N H+S  +   +V +  NKGFVI V RKLLQ
Sbjct: 238 GNEPSSAPRPPNVKTMLCLVFMLTFFSTLNHHHSAESRFYSVSDNSNKGFVIPVGRKLLQ 297

Query: 294 VSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVG 353
           V+G L      GG  GIG+YLGWAMA IYMGGRLPQICLNI+RGHVEGL+PLMF+FAL+G
Sbjct: 298 VAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVEGLSPLMFIFALIG 357

Query: 354 NATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHE 409
           N+TYVASILV+S  WS+I+PNLPWL DA GCVLLD+FILIQFIY+RYR  Q++K +
Sbjct: 358 NSTYVASILVSSTSWSKIKPNLPWLVDAFGCVLLDTFILIQFIYFRYRIRQDEKDK 413

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511496|ref|XP_004163970.1| PREDICTED: uncharacterized protein LOC101227133 [Cucumis sativus]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/416 (59%), Positives = 314/416 (75%), Gaps = 10/416 (2%)

Query: 1   MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNY 60
           MG F+S   +CPSN HC+EW +  M+YCLC  +DGVSL LG+ SVISWGVAE+PQI+TNY
Sbjct: 1   MGSFQSSKPICPSNKHCSEWVKNNMKYCLCGTKDGVSLTLGMISVISWGVAEIPQIVTNY 60

Query: 61  KEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSH 120
           +EKS++GLS+AFL TWILGDLFNVFGC+LEPATLPTQYYMA+LYT+TT IL  Q +YY H
Sbjct: 61  REKSSDGLSLAFLLTWILGDLFNVFGCILEPATLPTQYYMALLYTITTGILFTQAIYYGH 120

Query: 121 IYPRLKHNKRPQTGLMPN----QPEAAEKTRPSSNGVG-EQVNSSGKWKIDSDTSDTENF 175
           IYP++K+ +R   GL+ +    Q +A +K + S   V   QVN+    K ++   ++ + 
Sbjct: 121 IYPQMKYRRRQCKGLVHSEANAQIDARDKAQQSYGSVNVNQVNNDDMSKFNTSKRESAST 180

Query: 176 SIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSH-HSRISIEEPLLG 234
           S PIPLP   +N S GRELYY SARSLS SHTPT+GSF+ Q+M+P + H+   ++EPLL 
Sbjct: 181 S-PIPLPMLRQNSSTGRELYYMSARSLSRSHTPTSGSFLRQKMTPPYIHN--PMQEPLLD 237

Query: 235 GHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYS-NTEHDTVFEKPNKGFVIQVRRKLLQ 293
           G+  + +    N KTMLCLV ++ F +T N H+S  +   +V +  NKGFVI V RKLLQ
Sbjct: 238 GNEPSSAARPPNVKTMLCLVFMLTFFSTLNHHHSAESRFYSVSDNSNKGFVIPVGRKLLQ 297

Query: 294 VSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVG 353
           V+G L      GG  GIG+YLGWAMA IYMGGRLPQICLNI+RGHVEGL+PLMF+FAL+G
Sbjct: 298 VAGVLQNNVNEGGGGGIGTYLGWAMAVIYMGGRLPQICLNIKRGHVEGLSPLMFIFALIG 357

Query: 354 NATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQEDKHE 409
           N+TYVASILV+S  WS+I+PNLPWL DA GCVLLD+FILIQFIY+RYR  Q++K +
Sbjct: 358 NSTYVASILVSSTSWSKIKPNLPWLVDAFGCVLLDTFILIQFIYFRYRIRQDEKDK 413

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086677|ref|XP_002307928.1| predicted protein [Populus trichocarpa] gi|222853904|gb|EEE91451.1| predicted protein [Populus trichocarpa]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/414 (58%), Positives = 292/414 (70%), Gaps = 59/414 (14%)

Query: 10  VCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLS 69
           +CP   HC+ WAR+YMEYCLC+++DGVSL LG+ SV+SWGVAE+PQI+TNYKEKSTEGLS
Sbjct: 3   ICPQ--HCSRWARVYMEYCLCNMKDGVSLTLGMISVLSWGVAEIPQIVTNYKEKSTEGLS 60

Query: 70  IAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNK 129
           +AFL TWI+GDLFNVFGC+LEPATLPTQYYMA+LYT+T+ +LTAQT++Y HIY RLK N+
Sbjct: 61  LAFLLTWIIGDLFNVFGCMLEPATLPTQYYMAVLYTMTSTLLTAQTVHYGHIYHRLKSNR 120

Query: 130 RPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPFPRNGS 189
           R    L  N+P A E T    NG+                      S PIP P  P+  S
Sbjct: 121 R---RLKRNEPAAPEGT----NGL----------------------SSPIPFPTLPQKSS 151

Query: 190 PGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHS-RISIEEPLLGGHISTQSPPSTNTK 248
           P R+LYY SARSLSSSHTPT GSF+AQR +P   S R SIEEPLLG  ++TQS P+ NTK
Sbjct: 152 PERDLYYASARSLSSSHTPTVGSFLAQRTTPPSFSIRNSIEEPLLGEDVATQSAPNLNTK 211

Query: 249 TMLCL------VPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQES 302
           TML        V ++ FL T N H+S                     +L + S  +  E+
Sbjct: 212 TMLFTDNFLFQVSVVTFLGTLNLHHS------------------ANSRLDRTSSIMSHEN 253

Query: 303 VTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASIL 362
              G+  IG++LGW+MAAIYMGGRLPQICLNI+RG VEGLNPLMFVFALVGN TYVASIL
Sbjct: 254 DIDGNV-IGTFLGWSMAAIYMGGRLPQICLNIKRGKVEGLNPLMFVFALVGNITYVASIL 312

Query: 363 VNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQ--EDKHENSNSA 414
           V+S+ WS+IR NLPWL DAGGCVLLD+ IL+QF+Y+RYR  Q  EDK ++SN A
Sbjct: 313 VDSLAWSKIRANLPWLVDAGGCVLLDTCILLQFVYFRYRRRQVVEDKLQSSNGA 366

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481322|ref|XP_003632607.1| PREDICTED: uncharacterized protein LOC100853498 [Vitis vinifera]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/422 (56%), Positives = 297/422 (70%), Gaps = 24/422 (5%)

Query: 1   MGLFKSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNY 60
           M LF+S + +CP + HC+ WA  +M++CLCSV+D +SL LG+ SVISW +AE+PQIITNY
Sbjct: 1   MELFESSLPLCPRHQHCSLWAWRFMKFCLCSVKDEISLTLGVISVISWAIAEIPQIITNY 60

Query: 61  KEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSH 120
           KEKS+EGLSIAFL TWI+GDLFNV GC LEPATLPTQ+YMA+LYT+TT+ILTAQ++YY H
Sbjct: 61  KEKSSEGLSIAFLMTWIVGDLFNVLGCFLEPATLPTQFYMAVLYTITTLILTAQSIYYGH 120

Query: 121 IYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIP 180
           IY RLK  +     + PNQ     K R  +N  G +  S G  K +S+       S PIP
Sbjct: 121 IYHRLKSGRWYHKEIKPNQTGTINKNREDNNSAGGRQVSDG-LKNESNVFGEVPLSSPIP 179

Query: 181 --LPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQR-MSPSHHSRISIEEPLLGGHI 237
             LP  PRN SP RELYY SARSLS SH P  GSF+AQR  SPS H   S+EEPLL   +
Sbjct: 180 VNLPASPRNISPSRELYYMSARSLSKSHAPAMGSFLAQRKTSPSVHDSNSLEEPLLSSVV 239

Query: 238 STQSPPSTNTKTMLCLV-PIMIFLTTFNFHYSNTEHDTV-FEKPNK-GFVIQVRRKLLQV 294
            +QS P++ TK+ML ++   M FL  FNF  S    D +  EKPN+ G  ++V R LLQ+
Sbjct: 240 LSQSAPASTTKSMLSMLSATMFFLGCFNFLPSENNRDGIAAEKPNQGGIALKVGRTLLQL 299

Query: 295 SGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGN 354
           S G       GG+SGIG++LGW+MAAIY+GGRLPQI LNIRRG +E         AL GN
Sbjct: 300 SEG-------GGNSGIGTFLGWSMAAIYLGGRLPQIILNIRRGTIE--------XALTGN 344

Query: 355 ATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRS--FQEDKHENSN 412
           ATYV SILV+S+DWS+I+PNLPWL DAGGCVLLD+FIL QFI++  R+   QE+K  N N
Sbjct: 345 ATYVGSILVSSLDWSKIKPNLPWLVDAGGCVLLDAFILTQFIHFHSRTPEDQENKDGNFN 404

Query: 413 SA 414
           +A
Sbjct: 405 AA 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827747|ref|XP_002881756.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297327595|gb|EFH58015.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/375 (59%), Positives = 274/375 (73%), Gaps = 20/375 (5%)

Query: 31  SVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLE 90
           S RDG+SL LG+ SVISWGVAE+PQI+TNY EKSTEGLSIAFLTTW++GD+FN+ GCL+E
Sbjct: 6   SFRDGLSLSLGVISVISWGVAEIPQIMTNYTEKSTEGLSIAFLTTWMIGDIFNLLGCLME 65

Query: 91  PATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSS 150
           PATLPTQ+YMA+LYT+TT +L  Q++YY HIYPRLK N+R       NQ   AE+     
Sbjct: 66  PATLPTQFYMALLYTVTTSVLYVQSIYYGHIYPRLK-NRR-------NQMVEAERI---- 113

Query: 151 NGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPFP-RNGSPGRELYYTSARSLSSSHTPT 209
           + +   V   G+W+  SDT+     + PI + P   R    GREL+YTSARSLSSSHTP 
Sbjct: 114 SSISSDVKIPGRWRNSSDTTTCGGQTTPITMIPGSHRTSFTGRELFYTSARSLSSSHTPP 173

Query: 210 AGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPST--NTKTMLCLVPIMIFLTTFNFHY 267
           AGS +AQRM+  H S  ++EEPLL G     +PPS   +TK+MLC+V + +FL TFN   
Sbjct: 174 AGSVLAQRMARGH-SEPTLEEPLLPGD---STPPSLPPSTKSMLCVVSVFLFLGTFNLPN 229

Query: 268 SNTEHDTV-FEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGR 326
             +E  T+   + ++ FV++  RKLLQV+   + E   G SS IG +LGWAMAAIYMGGR
Sbjct: 230 MLSESRTMALGERDRVFVVRAARKLLQVTSSNVGEHSGGESSRIGMFLGWAMAAIYMGGR 289

Query: 327 LPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVL 386
           LPQICLN+RRGHVEGLNPLMF FALVGN TYVASILVNSV+W +I PNLPWL DAGGCV+
Sbjct: 290 LPQICLNMRRGHVEGLNPLMFFFALVGNMTYVASILVNSVEWLKIAPNLPWLVDAGGCVV 349

Query: 387 LDSFILIQFIYYRYR 401
           LD  IL+QF ++R R
Sbjct: 350 LDFLILLQFFHFRCR 364

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688510|ref|NP_850340.1| PQ loop repeat-containing protein [Arabidopsis thaliana] gi|19347739|gb|AAL86295.1| unknown protein [Arabidopsis thaliana] gi|22136728|gb|AAM91683.1| unknown protein [Arabidopsis thaliana] gi|330254825|gb|AEC09919.1| PQ loop repeat-containing protein [Arabidopsis thaliana]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/373 (57%), Positives = 269/373 (72%), Gaps = 20/373 (5%)

Query: 31  SVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLE 90
           S RDG+SL LG+ SVISWGVAE+PQI+TNY EKSTEGLSI FLTTW++GD+FN+ GCL+E
Sbjct: 6   SFRDGLSLSLGIISVISWGVAEIPQIMTNYSEKSTEGLSITFLTTWMIGDIFNLLGCLME 65

Query: 91  PATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSS 150
           PATLPTQ+YMA+LYT+TT +L  Q++YY HIYPRLK N+R Q           E  R S+
Sbjct: 66  PATLPTQFYMALLYTVTTSVLYVQSIYYGHIYPRLK-NRRDQ---------MVEAERISN 115

Query: 151 NGVGEQVNSSGKWKIDSDTSDTENFSIPIPL-PPFPRNGSPGRELYYTSARSLSSSHTPT 209
             +   V   G+W+  SDT+     + PI + P   R    GREL+YTSARSLSSSHTP 
Sbjct: 116 --IISDVKIPGRWRNSSDTTTCGGQTTPITMIPGSQRTSFTGRELFYTSARSLSSSHTPP 173

Query: 210 AGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSN 269
           AGS +AQRM+  + S  ++EEPLL   ++  S     TK++LC+V + +FL TFN     
Sbjct: 174 AGSVLAQRMARGY-SEPTLEEPLLPEDVTHPS-----TKSLLCVVSVFLFLGTFNLPNLL 227

Query: 270 TEHDTV-FEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLP 328
           +E  T+   + ++ FV++  RKLLQV+   + E   G SS IG +LGWAMAAIYMGGRLP
Sbjct: 228 SESRTMALGEGDRVFVVRAARKLLQVTSSNVAEHSGGESSRIGMFLGWAMAAIYMGGRLP 287

Query: 329 QICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLD 388
           QICLN+RRGHVEGLNPLMF FALVGN TYVASILVNSV+W ++ PNLPWL DAGGCV+LD
Sbjct: 288 QICLNMRRGHVEGLNPLMFFFALVGNMTYVASILVNSVEWLKLAPNLPWLVDAGGCVVLD 347

Query: 389 SFILIQFIYYRYR 401
             IL+QF ++R R
Sbjct: 348 FLILLQFFHFRCR 360

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242056953|ref|XP_002457622.1| hypothetical protein SORBIDRAFT_03g010545 [Sorghum bicolor] gi|241929597|gb|EES02742.1| hypothetical protein SORBIDRAFT_03g010545 [Sorghum bicolor]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/434 (52%), Positives = 286/434 (65%), Gaps = 35/434 (8%)

Query: 1   MGLF-KSEVAVCPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITN 59
           MG F ++  A CP+  HCAEWARIY++YCLCS ++G +L LGL SVISWG+AEVPQIITN
Sbjct: 1   MGFFGRTPPASCPATRHCAEWARIYLKYCLCSQKEGAALALGLISVISWGLAEVPQIITN 60

Query: 60  YKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYS 119
           Y++KSTEGLS+AFL TWI+GDLFN+ GC LEPATLPTQ+YMA+LYT+TT+ILT QT+YYS
Sbjct: 61  YRQKSTEGLSVAFLMTWIVGDLFNLVGCFLEPATLPTQFYMALLYTMTTLILTGQTLYYS 120

Query: 120 HIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNS--SGKWKIDSDTSDTENFSI 177
           HIY RLK  K            AA K +    G           K    S  ++  + ++
Sbjct: 121 HIYHRLKAKKS----------RAASKPQKHHRGDASLREKLLGAKDGAASRNNNESDATV 170

Query: 178 PIPLPPFPRN---------GSPGRELYYTSARSLSSSHTPTAGSFI-AQRMSPSHHSRIS 227
            IP  P P N          SP  + YY SARSLSSS  PTAG+++ + R S     + +
Sbjct: 171 LIPSSPIPVNMKFVDQCHGSSPSTDYYYMSARSLSSSPVPTAGTWLGSNRQSSRTPPQTN 230

Query: 228 IEEPLLGGHIS-TQSPPSTNTKTMLCLVPIMIFLTTFNFHY---SNTEHDTVFEKPNKGF 283
            +   L G I+   S PST TK  L + P M  L      +    NT      E P+ G 
Sbjct: 231 DQRGSLVGEIAPAHSAPSTVTKNALSVAPWMGLLLGMCLLHILVGNTHR----EMPS-GT 285

Query: 284 VIQVRRKLLQVSGGLLQESVTGGS-SGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGL 342
           VI V R+LL         S++ GS S IGS+LGWAMA IYMGGRLPQI LN++RGHVEGL
Sbjct: 286 VIPVGRRLLLFVDDHGNSSLSHGSGSEIGSFLGWAMAIIYMGGRLPQILLNMQRGHVEGL 345

Query: 343 NPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRS 402
           NPLMF FALVGN+TYV SILVNS+DWS++RPNLPWL DAGGCVLLDSFI++QF+Y+ YR 
Sbjct: 346 NPLMFAFALVGNSTYVGSILVNSMDWSKLRPNLPWLVDAGGCVLLDSFIILQFLYFHYRK 405

Query: 403 FQE--DKHENSNSA 414
            +E  D+H++++ A
Sbjct: 406 QREPSDEHDDADKA 419

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503326|ref|XP_003520461.1| PREDICTED: uncharacterized membrane protein YOL092W-like [Glycine max]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/402 (54%), Positives = 272/402 (67%), Gaps = 25/402 (6%)

Query: 1   MGLFKSEVAV--CPSNLHCAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIIT 58
           MG+F++      C SN HC + A+ +M     SVR+  S  LGL SVI W VAE+PQI+T
Sbjct: 1   MGVFENSTLSLWCHSNQHCLQLAKEHMG----SVRETASFLLGLISVIVWVVAEIPQILT 56

Query: 59  NYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYY 118
           NY+ KS EGLS+ FL TWI+GDLFN+ GCLLEPATLPTQ YMAMLYT+ T+ L AQT+YY
Sbjct: 57  NYRTKSAEGLSVTFLITWIIGDLFNLSGCLLEPATLPTQLYMAMLYTIITIALGAQTIYY 116

Query: 119 SHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIP 178
            HIYP+LK+ ++ +            +T      V +  ++    ++D     T+  S P
Sbjct: 117 GHIYPQLKYKRQLKI-----------ETFTKVGHVEKASDAEQSIQVDGSNRSTD-LSSP 164

Query: 179 IPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHIS 238
           IPLP  P+  S GREL+Y SAR LS S+TPTAGS +AQ+  P+  S   I+E LLG  I+
Sbjct: 165 IPLPARPQRISTGRELFYQSARYLSKSNTPTAGSILAQK-PPTLDS---IQESLLGSTIA 220

Query: 239 TQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEH-DTVFEKPNKGFVIQVRRKLLQVSGG 297
           TQS P+   K  LCLV  + FL   N      E  +++   P + FVI V RKL QVS  
Sbjct: 221 TQSAPALKMKNTLCLVSTLTFLGAINLLQPLDERINSMASNPRQQFVIYVGRKLFQVSDD 280

Query: 298 LLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATY 357
            L ++   GS  IG++ GWAM  IY+GGRLPQICLNIRRGHVEGLNPLMF+FA++GNATY
Sbjct: 281 QLPKTDVSGS--IGTFFGWAMTFIYLGGRLPQICLNIRRGHVEGLNPLMFLFAVIGNATY 338

Query: 358 VASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYR 399
           VASILV S+DWS+IRPNLPWL DAGGCVLLD FIL+QFIY+R
Sbjct: 339 VASILVISLDWSKIRPNLPWLVDAGGCVLLDFFILMQFIYFR 380

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357130326|ref|XP_003566800.1| PREDICTED: uncharacterized protein LOC100836633 [Brachypodium distachyon]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/403 (53%), Positives = 267/403 (66%), Gaps = 26/403 (6%)

Query: 17  CAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTW 76
           CA+WA+ Y++YCLCS +DGV+LGLGLASVISWGVAEVPQIITNYK+KSTEGLSIAFL TW
Sbjct: 18  CAQWAQTYLKYCLCSTKDGVALGLGLASVISWGVAEVPQIITNYKQKSTEGLSIAFLMTW 77

Query: 77  ILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLM 136
           I+GDLFN+ GC LEPATLPTQ+YMA+LYT+TTVILT QT+YYSHIY  +K  K   TG  
Sbjct: 78  IVGDLFNLAGCFLEPATLPTQFYMALLYTITTVILTGQTLYYSHIYHHVKATKTRATG-- 135

Query: 137 PNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPF--------PRNG 188
             Q             +G + + + +       +     +IPIP  P          R+G
Sbjct: 136 KPQKHLRRDASLRDKLLGHRDDEAPR------NNSQSGVTIPIPSSPIQVSTEVFRQRHG 189

Query: 189 --SPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIE-EPLLGGHISTQSPPST 245
             SP  + YY SARSLS S  P  G+++      +   + + + E L+G     QS P+T
Sbjct: 190 SISPSSDYYYVSARSLSRSPVPIGGAWLGNNRQTTKTPQTNDQNESLVGEFAPAQSAPAT 249

Query: 246 NTKTMLCLVP-IMIFLTTFNFH-YSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESV 303
            TK  L +VP I + L     H    T H  V    + G +I V RKLL ++      S+
Sbjct: 250 ITKNSLSVVPWISVLLGMCVLHILVGTAHKEV----SNGIIIPVGRKLLALADDHADSSL 305

Query: 304 TGGS-SGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASIL 362
             GS S IGS+LGWAMA IYMGGRLPQI LN++RGH EGL+PLMF FALVGN+TYV SIL
Sbjct: 306 RHGSGSEIGSFLGWAMAIIYMGGRLPQIFLNMQRGHAEGLSPLMFTFALVGNSTYVGSIL 365

Query: 363 VNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQE 405
           VNS+DWSR+RPNLPWL DAGGCVLLDSFI++QF+Y+ YR   E
Sbjct: 366 VNSMDWSRLRPNLPWLVDAGGCVLLDSFIILQFLYFHYRKQSE 408

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	414
TAIR|locus:2063208	376	AT2G41050 "AT2G41050" [Arabido	0.881	0.970	0.567	3.1e-106
TAIR|locus:2119777	288	AT4G20100 "AT4G20100" [Arabido	0.437	0.628	0.517	8.2e-85
TAIR|locus:2115270	392	AT4G36850 "AT4G36850" [Arabido	0.309	0.326	0.515	1.2e-75
CGD|CAL0004748	331	orf19.7370 [Candida albicans (	0.248	0.311	0.384	1.9e-27
UNIPROTKB|Q5A4G4	331	CaO19.7370 "Putative uncharact	0.248	0.311	0.384	1.9e-27
SGD|S000005452	308	YPQ1 "Putative vacuolar membra	0.214	0.288	0.411	1.6e-25
WB|WBGene00021546	311	laat-1 [Caenorhabditis elegans	0.415	0.553	0.284	3.6e-25
UNIPROTKB|Q95XZ6	311	laat-1 "Lysosomal amino acid t	0.415	0.553	0.284	3.6e-25
SGD|S000000351	296	RTC2 "Putative vacuolar membra	0.236	0.331	0.403	6.6e-24
CGD|CAL0000296	335	orf19.6950 [Candida albicans (	0.246	0.304	0.365	6.6e-24

TAIR|locus:2063208 AT2G41050 "AT2G41050" [Arabidopsis thaliana (taxid:3702)]

 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 220/388 (56%), Positives = 280/388 (72%)

Query:    31 SVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLE 90
             S RDG+SL LG+ SVISWGVAE+PQI+TNY EKSTEGLSI FLTTW++GD+FN+ GCL+E
Sbjct:     6 SFRDGLSLSLGIISVISWGVAEIPQIMTNYSEKSTEGLSITFLTTWMIGDIFNLLGCLME 65

Query:    91 PATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSS 150
             PATLPTQ+YMA+LYT+TT +L  Q++YY HIYPRLK N+R       +Q   AE+    S
Sbjct:    66 PATLPTQFYMALLYTVTTSVLYVQSIYYGHIYPRLK-NRR-------DQMVEAERI---S 114

Query:   151 NGVGEQVNSSGKWKIDSDTSDTENFSIPIPL-PPFPRNGSPGRELYYTSARSLSSSHTPT 209
             N + + V   G+W+  SDT+     + PI + P   R    GREL+YTSARSLSSSHTP 
Sbjct:   115 NIISD-VKIPGRWRNSSDTTTCGGQTTPITMIPGSQRTSFTGRELFYTSARSLSSSHTPP 173

Query:   210 AGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSN 269
             AGS +AQRM+  + S  ++EEPLL   ++    PST  K++LC+V + +FL TFN     
Sbjct:   174 AGSVLAQRMARGY-SEPTLEEPLLPEDVTH---PST--KSLLCVVSVFLFLGTFNLPNLL 227

Query:   270 TEHDTV-FEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLP 328
             +E  T+   + ++ FV++  RKLLQV+   + E   G SS IG +LGWAMAAIYMGGRLP
Sbjct:   228 SESRTMALGEGDRVFVVRAARKLLQVTSSNVAEHSGGESSRIGMFLGWAMAAIYMGGRLP 287

Query:   329 QICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLD 388
             QICLN+RRGHVEGLNPLMF FALVGN TYVASILVNSV+W ++ PNLPWL DAGGCV+LD
Sbjct:   288 QICLNMRRGHVEGLNPLMFFFALVGNMTYVASILVNSVEWLKLAPNLPWLVDAGGCVVLD 347

Query:   389 SFILIQFIYYRYRSFQED---KHENSNS 413
               IL+QF ++R R  ++    KHE + +
Sbjct:   348 FLILLQFFHFRCRKDKDTDKKKHETAEA 375

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0016571 "histone methylation" evidence=RCA

TAIR|locus:2119777 AT4G20100 "AT4G20100" [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
 Identities = 103/199 (51%), Positives = 131/199 (65%)

Query:   222 HHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSNTEHDTVFEKPNK 281
             +H  + +EEPLL         PST  K++LC+V + +FL +FN    +   D      ++
Sbjct:   101 NHQMVDVEEPLLREEAKR---PST--KSLLCVVSVFLFLGSFNVLSGSRSMD--LRGKDR 153

Query:   282 GFVI--QVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHV 339
              FV+     RKLL+VS G L     G ++ IG +LGWAMAAIYMGGRLPQIC+N+RRG+V
Sbjct:   154 VFVVGGAGARKLLEVSSGNL-----GENNNIGMWLGWAMAAIYMGGRLPQICMNVRRGNV 208

Query:   340 EGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYR 399
             EGLNPLMF FA +GN TYVASILVNSV+WS+I PNLPWL D+GGC +LD  IL+QF Y+ 
Sbjct:   209 EGLNPLMFFFAFIGNVTYVASILVNSVEWSKIEPNLPWLVDSGGCAVLDFLILLQFFYFH 268

Query:   400 YRSFQED----KHENSNSA 414
              R  + D    KHE    A
Sbjct:   269 CRKVEADSVKKKHETGEEA 287

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2115270 AT4G36850 "AT4G36850" [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
 Identities = 68/132 (51%), Positives = 95/132 (71%)

Query:    17 CAEWARIYMEYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTW 76
             C  W  IY + CLC++ D VS  LG+AS++ WGVAE+PQ+ITN++ KS+ G+S++FL  W
Sbjct:    14 CVRWVEIYFDDCLCNLNDDVSFALGIASLLCWGVAEIPQVITNFRTKSSNGVSLSFLLAW 73

Query:    77 ILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLM 136
             + GD+FN+ GCLLEPATLPTQ+Y A+LYT++TV+L  QT+YY +IY   +H +   T + 
Sbjct:    74 VAGDIFNLVGCLLEPATLPTQFYTALLYTVSTVVLVIQTIYYDYIYKLCRHRR---TKIC 130

Query:   137 PNQPEAAEKTRP 148
                 E  EK RP
Sbjct:   131 QKDEEDEEK-RP 141

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

CGD|CAL0004748 orf19.7370 [Candida albicans (taxid:5476)]

 Score = 188 (71.2 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
 Identities = 40/104 (38%), Positives = 58/104 (55%)

Query:   310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
             +    GW  A  Y+G R+PQI LN  R   +G++ + F+FA +GN TYV SIL   + W+
Sbjct:   210 LAQIFGWLCAFFYLGSRIPQIVLNYERKSCDGISFMFFLFACLGNLTYVISILSIDMSWN 269

Query:   370 RIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQE-DKHENSN 412
              +  N  WLA + G + LD  I IQF  Y      E  ++E+S+
Sbjct:   270 YLWVNSSWLAGSLGTLGLDFTIFIQFFLYNENKDDEFSEYESSS 313

GO:0003674 "molecular_function" evidence=ND

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A4G4 CaO19.7370 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 188 (71.2 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
 Identities = 40/104 (38%), Positives = 58/104 (55%)

Query:   310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
             +    GW  A  Y+G R+PQI LN  R   +G++ + F+FA +GN TYV SIL   + W+
Sbjct:   210 LAQIFGWLCAFFYLGSRIPQIVLNYERKSCDGISFMFFLFACLGNLTYVISILSIDMSWN 269

Query:   370 RIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQE-DKHENSN 412
              +  N  WLA + G + LD  I IQF  Y      E  ++E+S+
Sbjct:   270 YLWVNSSWLAGSLGTLGLDFTIFIQFFLYNENKDDEFSEYESSS 313

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

SGD|S000005452 YPQ1 "Putative vacuolar membrane transporter for cationic amino acids" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 190 (71.9 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
 Identities = 37/90 (41%), Positives = 56/90 (62%)

Query:   315 GWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPN 374
             G+  A +Y+G R+PQI LN +R   EG++ L F+FA +GN T++ S++V S+DW  +  N
Sbjct:   216 GYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDWKYLIMN 275

Query:   375 LPWLADAGGCVLLDSFILIQF-IYYRYRSF 403
               WL  + G + +D  I  QF IY R + F
Sbjct:   276 ASWLVGSIGTLFMDFVIFSQFFIYKRNKKF 305

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0015326 "cationic amino acid transmembrane transporter activity" evidence=ISA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0016020 "membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0071627 "integral to fungal-type vacuolar membrane" evidence=IDA

GO:0034488 "basic amino acid transmembrane export from vacuole" evidence=ISA;IMP

WB|WBGene00021546 laat-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 186 (70.5 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
 Identities = 51/179 (28%), Positives = 92/179 (51%)

Query:   234 GGHISTQSPPSTNT-KTMLCLVPIMIFLTTFNFHYSNTEHDTVFE-KPNKGFVIQVRRKL 291
             G ++   + P+T++ ++   +VP++   +  +F    +    V + +  + F+  +  + 
Sbjct:   120 GYYLKIYNRPTTSSARSNTIVVPVLALASVGSFFVFESALPPVGDHRVKRSFLESLNHQE 179

Query:   292 -LQVSGGLLQESV-TGGSSGIGSYLGWAMAAI-YMGGRLPQICLNIRRGHVEGLNPLMFV 348
              L + G L    + T  +  +G  +G +MAA+ Y GGR+PQI  N R    EGL+  MF 
Sbjct:   180 GLPLEGILKMWPIFTSYTDMLGYIIG-SMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFY 238

Query:   349 FALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRS-FQED 406
               +  N TY  S+L+ +  W  +  +LPWLA + GC   D+ I+ Q+  YR ++   ED
Sbjct:   239 IIVAANFTYGISVLLATTSWLYLLRHLPWLAGSLGCCCFDAVIISQYYLYRPKTPLAED 297

GO:0016021 "integral to membrane" evidence=IEA

GO:0008340 "determination of adult lifespan" evidence=IMP

UNIPROTKB|Q95XZ6 laat-1 "Lysosomal amino acid transporter 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 186 (70.5 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
 Identities = 51/179 (28%), Positives = 92/179 (51%)

Query:   234 GGHISTQSPPSTNT-KTMLCLVPIMIFLTTFNFHYSNTEHDTVFE-KPNKGFVIQVRRKL 291
             G ++   + P+T++ ++   +VP++   +  +F    +    V + +  + F+  +  + 
Sbjct:   120 GYYLKIYNRPTTSSARSNTIVVPVLALASVGSFFVFESALPPVGDHRVKRSFLESLNHQE 179

Query:   292 -LQVSGGLLQESV-TGGSSGIGSYLGWAMAAI-YMGGRLPQICLNIRRGHVEGLNPLMFV 348
              L + G L    + T  +  +G  +G +MAA+ Y GGR+PQI  N R    EGL+  MF 
Sbjct:   180 GLPLEGILKMWPIFTSYTDMLGYIIG-SMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFY 238

Query:   349 FALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRS-FQED 406
               +  N TY  S+L+ +  W  +  +LPWLA + GC   D+ I+ Q+  YR ++   ED
Sbjct:   239 IIVAANFTYGISVLLATTSWLYLLRHLPWLAGSLGCCCFDAVIISQYYLYRPKTPLAED 297

GO:0015809 "arginine transport" evidence=IDA

GO:0015181 "arginine transmembrane transporter activity" evidence=IDA

GO:0015819 "lysine transport" evidence=IDA

GO:0015189 "L-lysine transmembrane transporter activity" evidence=IDA

GO:0031301 "integral to organelle membrane" evidence=IDA

GO:0005765 "lysosomal membrane" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IDA

SGD|S000000351 RTC2 "Putative vacuolar membrane transporter for cationic amino acids" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 185 (70.2 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
 Identities = 42/104 (40%), Positives = 57/104 (54%)

Query:    41 GLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYM 100
             G  S+  W V  VPQI  N++ +S EGLS+ F+  W+LGD+FNV G +++   LPT   +
Sbjct:    18 GSISICCWIVVFVPQIYENFRRQSAEGLSLLFIVLWLLGDIFNVMGAMMQNL-LPTMIIL 76

Query:   101 AMLYTLTTVILTAQTMYYSH----IYPRLKHNKRPQTGLMPNQP 140
             A  YTL  +IL  Q M+Y      I   +K N  P   L P  P
Sbjct:    77 AAYYTLADLILLIQCMWYDKEKKSILQEVKKNVDP-VHLPPANP 119

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0015326 "cationic amino acid transmembrane transporter activity" evidence=ISA;IMP

GO:0034488 "basic amino acid transmembrane export from vacuole" evidence=ISA;IMP

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0071627 "integral to fungal-type vacuolar membrane" evidence=IDA

CGD|CAL0000296 orf19.6950 [Candida albicans (taxid:5476)]

 Score = 190 (71.9 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
 Identities = 38/104 (36%), Positives = 58/104 (55%)

Query:    30 CSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLL 89
             CS+   +S      S ISW  A++PQI+ NY+ KS EG+S +FL  W +GD  +   CL+
Sbjct:     3 CSI-SFISTTFSTTSCISWIFAQLPQILENYRNKSAEGISPSFLILWFMGDFLSFTSCLV 61

Query:    90 E-PATLPTQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQ 132
                  L  Q Y+++ +    V L  Q  YY+ +YPRL+  ++ Q
Sbjct:    62 NIDIVLDFQLYLSVFFLCNDVTLCFQYYYYNSVYPRLQQQQQQQ 105

GO:0003674 "molecular_function" evidence=ND

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	414
pfam04193	61	pfam04193, PQ-loop, PQ loop repeat	2e-15
pfam04193	61	pfam04193, PQ-loop, PQ loop repeat	5e-14
smart00679	32	smart00679, CTNS, Repeated motif present between t	2e-09
smart00679	32	smart00679, CTNS, Repeated motif present between t	1e-06
TIGR00951	220	TIGR00951, 2A43, Lysosomal Cystine Transporter	0.001

>gnl|CDD|202926 pfam04193, PQ-loop, PQ loop repeat

 Score = 69.9 bits (172), Expect = 2e-15
 Identities = 27/61 (44%), Positives = 37/61 (60%)

Query: 36 VSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLP 95
          +S  LG  S++ W V+ +PQII NY+ KSTEGLSI FL  W+LGD+  +   +L      
Sbjct: 1  LSNVLGYISLVLWLVSYIPQIIKNYRRKSTEGLSILFLLLWLLGDILYLLYNILNGFPPL 60

Query: 96 T 96
           
Sbjct: 61 L 61

Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localisation of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Length = 61

>gnl|CDD|202926 pfam04193, PQ-loop, PQ loop repeat

 Score = 66.0 bits (162), Expect = 5e-14
 Identities = 16/60 (26%), Positives = 30/60 (50%)

Query: 310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWS 369
           + + LG+    +++   +PQI  N RR   EGL+ L  +  L+G+  Y+   ++N     
Sbjct: 1   LSNVLGYISLVLWLVSYIPQIIKNYRRKSTEGLSILFLLLWLLGDILYLLYNILNGFPPL 60

Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localisation of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Length = 61

>gnl|CDD|128923 smart00679, CTNS, Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 20/32 (62%), Positives = 26/32 (81%)

Query: 50 VAEVPQIITNYKEKSTEGLSIAFLTTWILGDL 81
          V+ +PQII NY+ KSTEGLSI F+  W+LGD+
Sbjct: 1  VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI 32

Function unknown, but likely to be associated with the glycosylation machinery. Length = 32

>gnl|CDD|128923 smart00679, CTNS, Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 324 GGRLPQICLNIRRGHVEGLNPLMFVFALVGN 354
              LPQI  N RR   EGL+ L  +  L+G+
Sbjct: 1   VSLLPQIIKNYRRKSTEGLSILFVLLWLLGD 31

Function unknown, but likely to be associated with the glycosylation machinery. Length = 32

>gnl|CDD|130026 TIGR00951, 2A43, Lysosomal Cystine Transporter

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 39 GLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFL 73
           LG   V +W ++  PQII N++ KS EGLS  F+
Sbjct: 6  ILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFV 40

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 220

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	414
KOG2913	260	consensus Predicted membrane protein [Function unk	100.0
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	99.92
KOG3145	372	consensus Cystine transporter Cystinosin [Amino ac	99.8
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	99.63
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	99.49
PF04193	61	PQ-loop: PQ loop repeat	99.4
PF04193	61	PQ-loop: PQ loop repeat	99.35
KOG3145	372	consensus Cystine transporter Cystinosin [Amino ac	99.31
KOG2913	260	consensus Predicted membrane protein [Function unk	99.2
smart00679	32	CTNS Repeated motif present between transmembrane	98.87
smart00679	32	CTNS Repeated motif present between transmembrane	98.82
COG4095	89	Uncharacterized conserved protein [Function unknow	98.65
COG4095	89	Uncharacterized conserved protein [Function unknow	98.61
PF03083	87	MtN3_slv: Sugar efflux transporter for intercellul	98.22
PF03083	87	MtN3_slv: Sugar efflux transporter for intercellul	97.71
PHA02246	192	hypothetical protein	97.26
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	97.24
KOG1623	243	consensus Multitransmembrane protein [General func	97.08
PHA02246	192	hypothetical protein	97.05
KOG1623	243	consensus Multitransmembrane protein [General func	95.04
PF00810	147	ER_lumen_recept: ER lumen protein retaining recept	85.03

>KOG2913 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.1e-36  Score=294.07  Aligned_cols=248  Identities=38%  Similarity=0.581  Sum_probs=176.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHHHHHHH
Q 015046           31 SVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVI  110 (414)
Q Consensus        31 ~~~~~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~~~d~i  110 (414)
                      ..++.+|.++|.+|.+||+++.+|||++|||+||+||+|+.|++.|++||++|++|+++++ +.|+|++.+.||++.|++
T Consensus         3 ~~~~~~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wligdi~nl~g~~l~~-~~~~~~~~~~yy~~~d~~   81 (260)
T KOG2913|consen    3 MINDTLSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLIGDIFNLVGFFLQP-LGSTLKVQAVYYTLADSV   81 (260)
T ss_pred             chHHHHHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHHccHHHHHHHHhcc-cchhHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999999999999999995 788999999999999999


Q ss_pred             HHhhhhhcccccc-ccccCCCCCCCCCCCCCccccccCCCCCCCCccccCCCCccccCCCCCCCCCCcCCCCCCCCCCCC
Q 015046          111 LTAQTMYYSHIYP-RLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIPLPPFPRNGS  189 (414)
Q Consensus       111 l~~Q~~yY~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  189 (414)
                      ++.|++||+..++ +..            .+      +++.              +     ...+.....          
T Consensus        82 l~~q~~yy~~~~~~~pl------------l~------~~s~--------------~-----s~~~~~~~~----------  114 (260)
T KOG2913|consen   82 LFVQCLYYGNIYPREPL------------LP------VPSF--------------R-----SLLGGLEAL----------  114 (260)
T ss_pred             HHHHHHhcchhcccCcc------------cc------ccch--------------h-----hhhcchHHH----------
Confidence            9999999987555 100            00      0000              0     000000000          


Q ss_pred             CCccccccccccccCCCCCCCCccccccCCCCCCCCccccccccCCCCCCCCCCCCccchhhhhhHHHHHhhhhcccccc
Q 015046          190 PGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFLTTFNFHYSN  269 (414)
Q Consensus       190 ~~~~~~~~sars~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  269 (414)
                           ...+.....    +        +..                     .   ...........+....+.  .... 
T Consensus       115 -----~~~~~~~~~----~--------~~~---------------------~---~~~~~~g~~~~~~~~~~~--~~~~-  150 (260)
T KOG2913|consen  115 -----LILSIKLFS----P--------RFV---------------------K---WPVVALGFLAIVFLICGA--AYES-  150 (260)
T ss_pred             -----HHHHhhccC----c--------chh---------------------h---ccchhhhhHHHHHHHHHH--Hhhc-
Confidence                 000000000    0        000                     0   000000001111111111  0000 


Q ss_pred             CcccccccCCCCCcchhhhcccccccCCCccccCCCCcchhHHHHHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHH
Q 015046          270 TEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVF  349 (414)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~~~~~~~g~ilG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~  349 (414)
                        .               .+.         ........+..|.++||+++++|.++|+|||++||+||+|+|+++.+|++
T Consensus       151 --~---------------~~~---------~~~~~~~~~~lg~ilG~l~a~ly~~~rIPQI~~n~~~~s~eGls~~~F~~  204 (260)
T KOG2913|consen  151 --L---------------LRA---------VRVNGLEIDSLGAILGSLSALLYLGARIPQIILNHLRKSTEGLSLLAFAF  204 (260)
T ss_pred             --c---------------ccc---------cccchhhhcchHHHHHHHHHHHHcccccchhhhhhccCccchhHHHHHHH
Confidence              0               000         00000336779999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCccccccchhhHHHhHHHHHHHHHHHHHhheecCCCCc
Q 015046          350 ALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSFQ  404 (414)
Q Consensus       350 ~~~Gn~~y~~si~~~~~~~~~l~~~lp~l~~s~~~~~lD~iil~Q~~~Y~~~~~~  404 (414)
                      +++||.+|..|        +++..|+||+.++.++..+|++++.|+++|++.+.+
T Consensus       205 ~~~~n~~y~~s--------~~~~~n~~w~~~~~~~~~~D~~~~~q~~~~~~~~~~  251 (260)
T KOG2913|consen  205 NSLGNTTYILS--------SYLVTNLPWLVDSKGTIYLDIFIFLQFFNYRASKAQ  251 (260)
T ss_pred             HHccccccccc--------cccccCCcccccCCcchhHHHHHHHHHHHhhccccc
Confidence            99999999986        567789999999999999999999999999988844

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=99.92  E-value=8.5e-24  Score=200.99  Aligned_cols=205  Identities=19%  Similarity=0.215  Sum_probs=143.3

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhc------CCCchHH--------HHH
Q 015046           35 GVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLE------PATLPTQ--------YYM  100 (414)
Q Consensus        35 ~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~------~~~lp~q--------~~~  100 (414)
                      .+|+++|++++++|+++++||++||||+||++|+|+.|+++|++|.++.+++.+..      .++.|+.        ++.
T Consensus         2 ~iS~~lG~~~~~~~~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~~v~~edl~~   81 (220)
T TIGR00951         2 LLSQILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSPGVTQNDVFF   81 (220)
T ss_pred             chHHHHHHHHHHHHHHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccCCCcHHHHHH
Confidence            47999999999999999999999999999999999999999999999999985321      1234443        444


Q ss_pred             HHHHHHHHHHHHhhhhhccccccccccCCCCCCCCCCCCCccccccCCCCCCCCccccCCCCccccCCCCCCCCCCcCCC
Q 015046          101 AMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTENFSIPIP  180 (414)
Q Consensus       101 a~~~~~~d~il~~Q~~yY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  180 (414)
                      ++..++++++++.|+.+|+...+     +.                                 .+            +  
T Consensus        82 ai~~~il~~l~~~q~~~~~~~~~-----~~---------------------------------s~------------~--  109 (220)
T TIGR00951        82 TLHAILICFIVLHQCGDYERGWQ-----RV---------------------------------SN------------P--  109 (220)
T ss_pred             HHHHHHHHHHHHHHHhhcccccc-----cc---------------------------------ch------------h--
Confidence            55667788888899887752110     00                                 00            0  


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCCCCccccccCCCCCCCCccccccccCCCCCCCCCCCCccchhhhhhHHHHHh
Q 015046          181 LPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCLVPIMIFL  260 (414)
Q Consensus       181 ~~~~~~~~~~~~~~~~~sars~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (414)
                                  .                                                     .. .........+.
T Consensus       110 ------------~-----------------------------------------------------~~-~~~~~~~~~~~  123 (220)
T TIGR00951       110 ------------W-----------------------------------------------------IL-RILVALLACFA  123 (220)
T ss_pred             ------------H-----------------------------------------------------HH-HHHHHHHHHHH
Confidence                        0                                                     00 00000000000


Q ss_pred             hhhccccccCcccccccCCCCCcchhhhcccccccCCCccccCCCCcchhHHHHHHHHHHHHhhcchhhhhhHHhcCccC
Q 015046          261 TTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVE  340 (414)
Q Consensus       261 g~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~~~~~~~g~ilG~is~~l~~~sriPQI~~NyrrKSt~  340 (414)
                      ........   .                                ......-..++++...+.+++++||++.|||||||+
T Consensus       124 ~~~~~~~~---~--------------------------------~~~l~~l~~l~~iki~is~ikyiPQi~~Ny~~ksT~  168 (220)
T TIGR00951       124 TLLVALLS---P--------------------------------ITPLAFVTMLSYIKVAVTLVKYFPQAATNYHNKSTG  168 (220)
T ss_pred             HHHHHHHh---c--------------------------------CChHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCC
Confidence            00000000   0                                001224456888999999999999999999999999


Q ss_pred             ccCHHHHHHHHHHHHHHHHHHhhcccCccccccchhhHHHhHHHHHHHHHHHHHhheec
Q 015046          341 GLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYR  399 (414)
Q Consensus       341 GlS~~~~~~~~~Gn~~y~~si~~~~~~~~~l~~~lp~l~~s~~~~~lD~iil~Q~~~Y~  399 (414)
                      |+|+...+++++|.+-..+..+...       .+...+.....++++|.+++.|+++|+
T Consensus       169 glSi~~i~Ld~~G~lqri~ts~~~~-------gd~~~l~~~~~s~~~n~i~~~Q~~~y~  220 (220)
T TIGR00951       169 QLSIITVFLDFTGLLQRIFQSVNET-------GDPLKAGLFVVSSLFNGLFAAQVFFYW  220 (220)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999655444333221       566788889999999999999999996

>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]

Probab=99.80  E-value=1.3e-20  Score=181.30  Aligned_cols=220  Identities=20%  Similarity=0.259  Sum_probs=157.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHh-------cCC--------Cch-
Q 015046           32 VRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLL-------EPA--------TLP-   95 (414)
Q Consensus        32 ~~~~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l-------~~~--------~lp-   95 (414)
                      ....+.+++||+-.+.|.++..||||.|||+||+.||+.-|+.+.+.|-..+.++.++       +++        -.| 
T Consensus       119 ~l~il~~IvGwvYf~aWSISfYPqii~N~RrKSv~gLnfDFv~LNl~Gfs~y~ifn~~ly~~~~iq~~y~~~~p~g~~pv  198 (372)
T KOG3145|consen  119 ALVILDQIVGWVYFVAWSISFYPQIILNWRRKSVVGLNFDFVMLNLTGFSAYSIFNFLLYYCPKIQNQYDTSYPLGVPPV  198 (372)
T ss_pred             hHHHHHhhhheeEEEEEeeeechHHHhhhhhcceeccccceeeehhhhhHHHHHHHHHHHhcHHhccceeccCCCCCCcc
Confidence            4677889999999999999999999999999999999999999999999988776553       110        112 


Q ss_pred             --HHHHHHHHHHHHHHHHHhhhhhccccccccccCCCCCCCCCCCCCccccccCCCCCCCCccccCCCCccccCCCCCCC
Q 015046           96 --TQYYMAMLYTLTTVILTAQTMYYSHIYPRLKHNKRPQTGLMPNQPEAAEKTRPSSNGVGEQVNSSGKWKIDSDTSDTE  173 (414)
Q Consensus        96 --~q~~~a~~~~~~d~il~~Q~~yY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (414)
                        .-++.++.-+++.++++.|++.|.+..+|.                       +            +           
T Consensus       199 ~~nDv~fslHa~lmt~Iti~Qc~~yeR~~q~v-----------------------s------------~-----------  232 (372)
T KOG3145|consen  199 TLNDVVFSLHAVLMTVITILQCFFYERGWQRV-----------------------S------------K-----------  232 (372)
T ss_pred             chhhhhhhHHHHHHHHHHHHHHHhhhhccccc-----------------------c------------h-----------
Confidence              124556667889999999999997422110                       0            0           


Q ss_pred             CCCcCCCCCCCCCCCCCCccccccccccccCCCCCCCCccccccCCCCCCCCccccccccCCCCCCCCCCCCccchhhhh
Q 015046          174 NFSIPIPLPPFPRNGSPGRELYYTSARSLSSSHTPTAGSFIAQRMSPSHHSRISIEEPLLGGHISTQSPPSTNTKTMLCL  253 (414)
Q Consensus       174 ~~~~~i~~~~~~~~~~~~~~~~~~sars~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (414)
                          +|                                 .                   +                 ..+
T Consensus       233 ----~i---------------------------------a-------------------l-----------------gil  239 (372)
T KOG3145|consen  233 ----GI---------------------------------A-------------------L-----------------GIL  239 (372)
T ss_pred             ----hH---------------------------------H-------------------H-----------------HHH
Confidence                00                                 0                   0                 000


Q ss_pred             hHHHHHhhhhccccccCcccccccCCCCCcchhhhcccccccCCCccccCCCCcchhHHHHHHHHHHHHhhcchhhhhhH
Q 015046          254 VPIMIFLTTFNFHYSNTEHDTVFEKPNKGFVIQVRRKLLQVSGGLLQESVTGGSSGIGSYLGWAMAAIYMGGRLPQICLN  333 (414)
Q Consensus       254 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ll~~~~~~~~~~~~~~~~~~g~ilG~is~~l~~~sriPQI~~N  333 (414)
                       .+..+..+..+...   .         +.++    +                +-..-..+.++...+.++.++||.+.|
T Consensus       240 -~i~~~f~~~~~~va---~---------~~~~----~----------------wL~f~~~~syiKl~mTliKYiPQa~mN  286 (372)
T KOG3145|consen  240 -AIFWLFAVVFMYVA---Y---------WYVI----R----------------WLAFLNNLSYIKLAMTLIKYIPQAYMN  286 (372)
T ss_pred             -HHHHHHHHHHHHHh---h---------HHHH----H----------------HHHHHHHHHHHHHHHHHHHhhhHHhhc
Confidence             00001111000000   0         0000    0                111234577888889999999999999


Q ss_pred             HhcCccCccCHHHHHHHHHHHHHHHHHHhhcc---cCccccccchhhHHHhHHHHHHHHHHHHHhheecCCCC
Q 015046          334 IRRGHVEGLNPLMFVFALVGNATYVASILVNS---VDWSRIRPNLPWLADAGGCVLLDSFILIQFIYYRYRSF  403 (414)
Q Consensus       334 yrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~~---~~~~~l~~~lp~l~~s~~~~~lD~iil~Q~~~Y~~~~~  403 (414)
                      |+||||+|+|+.-+++++.|+++..++.++++   .+|+-+..+.-...-++.++++|++.++|++.|+++++
T Consensus       287 ~tRKSt~gwsIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi~FdiiFm~QhyVly~~~~  359 (372)
T KOG3145|consen  287 FTRKSTVGWSIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSIFFDIIFMMQHYVLYPRGH  359 (372)
T ss_pred             ceeccccccccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHHHHHHHHHhhheeEecccc
Confidence            99999999999999999999999999998864   46776777877777789999999999999987665443

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=99.63  E-value=3.2e-15  Score=137.89  Aligned_cols=89  Identities=27%  Similarity=0.306  Sum_probs=83.2

Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHH
Q 015046           26 EYCLCSVRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYT  105 (414)
Q Consensus        26 ~~C~~~~~~~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~  105 (414)
                      .+|.   ...+|+.+|+......+..++|||.|.-.+||++|||..-+.++++|.+..+.|++-.|  +|+..|++..|+
T Consensus        23 ~~cl---~~llsklLg~~~va~sl~vKlPQI~kI~aakSa~GLSv~s~~LElvgytvtl~Y~~~~g--~pFss~gE~~fL   97 (230)
T KOG3211|consen   23 KDCL---KALLSKLLGLSTVAGSLLVKLPQIMKIRAAKSARGLSVVSLLLELVGYTVTLSYSYTSG--YPFSSYGEYPFL   97 (230)
T ss_pred             ccch---HHHHHhhhhHHHHHHHHHhhhhHHHHHHhhcccccccHHHHHHHHHHHHheeeehhhcC--CCchhHHHHHHH
Confidence            3688   89999999999999999999999999999999999999999999999999999999985  899999987776


Q ss_pred             HH-HHHHHhhhhhcc
Q 015046          106 LT-TVILTAQTMYYS  119 (414)
Q Consensus       106 ~~-d~il~~Q~~yY~  119 (414)
                      ++ +++++.++++|+
T Consensus        98 l~Q~vili~~if~f~  112 (230)
T KOG3211|consen   98 LLQAVILILCIFHFS  112 (230)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            66 999999999997

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=99.49  E-value=9.1e-14  Score=132.37  Aligned_cols=98  Identities=23%  Similarity=0.195  Sum_probs=81.2

Q ss_pred             hhHHHHHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhc----ccCcccccc----chhhHHH
Q 015046          309 GIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVN----SVDWSRIRP----NLPWLAD  380 (414)
Q Consensus       309 ~~g~ilG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~----~~~~~~l~~----~lp~l~~  380 (414)
                      .+++++||+++++|+.+++||++|||||||++|+|+.|++++++|+++|.++.+..    ..+.++...    +..+++.
T Consensus         2 ~iS~~lG~~~~~~~~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~~v~~edl~~   81 (220)
T TIGR00951         2 LLSQILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSPGVTQNDVFF   81 (220)
T ss_pred             chHHHHHHHHHHHHHHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccCCCcHHHHHH
Confidence            36789999999999999999999999999999999999999999999999875443    112223222    3358999


Q ss_pred             hHHHHHHHHHHHHHhheecCCCCccc
Q 015046          381 AGGCVLLDSFILIQFIYYRYRSFQED  406 (414)
Q Consensus       381 s~~~~~lD~iil~Q~~~Y~~~~~~~~  406 (414)
                      ++++++++++++.|+.+|.+..++..
T Consensus        82 ai~~~il~~l~~~q~~~~~~~~~~~s  107 (220)
T TIGR00951        82 TLHAILICFIVLHQCGDYERGWQRVS  107 (220)
T ss_pred             HHHHHHHHHHHHHHHhhccccccccc
Confidence            99999999999999999977655543

>PF04193 PQ-loop: PQ loop repeat

Probab=99.40  E-value=3.9e-13  Score=102.39  Aligned_cols=56  Identities=43%  Similarity=0.746  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcC
Q 015046           36 VSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEP   91 (414)
Q Consensus        36 ~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~   91 (414)
                      ++.++|++++++|+++++|||+||||+||++|+|+.++++++.|+++++++.++.+
T Consensus         1 i~~~~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~~~   56 (61)
T PF04193_consen    1 ISNILGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSILSN   56 (61)
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999999999999999999885

>PF04193 PQ-loop: PQ loop repeat

Probab=99.35  E-value=1.6e-12  Score=99.02  Aligned_cols=57  Identities=25%  Similarity=0.403  Sum_probs=52.9

Q ss_pred             hHHHHHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhccc
Q 015046          310 IGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSV  366 (414)
Q Consensus       310 ~g~ilG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~~~  366 (414)
                      ++.++|+++.++++.+++||++||||+|+++|+|+.+++++++|++++.++.+....
T Consensus         1 i~~~~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~~~~   57 (61)
T PF04193_consen    1 ISNILGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSILSNY   57 (61)
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            367899999999999999999999999999999999999999999999998877644

>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]

Probab=99.31  E-value=3.7e-13  Score=130.25  Aligned_cols=101  Identities=22%  Similarity=0.238  Sum_probs=84.8

Q ss_pred             cchhHHHHHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhc--c--cCccc--------cccc
Q 015046          307 SSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVN--S--VDWSR--------IRPN  374 (414)
Q Consensus       307 ~~~~g~ilG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~--~--~~~~~--------l~~~  374 (414)
                      ..++.+|+||++.+.|.+|++||||.||||||++||++.|..+++.|-..|.+..++.  .  ...+|        ....
T Consensus       120 l~il~~IvGwvYf~aWSISfYPqii~N~RrKSv~gLnfDFv~LNl~Gfs~y~ifn~~ly~~~~iq~~y~~~~p~g~~pv~  199 (372)
T KOG3145|consen  120 LVILDQIVGWVYFVAWSISFYPQIILNWRRKSVVGLNFDFVMLNLTGFSAYSIFNFLLYYCPKIQNQYDTSYPLGVPPVT  199 (372)
T ss_pred             HHHHHhhhheeEEEEEeeeechHHHhhhhhcceeccccceeeehhhhhHHHHHHHHHHHhcHHhccceeccCCCCCCccc
Confidence            5678899999999999999999999999999999999999999999999999876552  1  11111        2223


Q ss_pred             hhhHHHhHHHHHHHHHHHHHhheecCCCCcccc
Q 015046          375 LPWLADAGGCVLLDSFILIQFIYYRYRSFQEDK  407 (414)
Q Consensus       375 lp~l~~s~~~~~lD~iil~Q~~~Y~~~~~~~~~  407 (414)
                      +.++..+++.+++.++++.|++.|.+..++..+
T Consensus       200 ~nDv~fslHa~lmt~Iti~Qc~~yeR~~q~vs~  232 (372)
T KOG3145|consen  200 LNDVVFSLHAVLMTVITILQCFFYERGWQRVSK  232 (372)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHhhhhcccccch
Confidence            567899999999999999999999998877543

>KOG2913 consensus Predicted membrane protein [Function unknown]

Probab=99.20  E-value=4.1e-11  Score=116.46  Aligned_cols=92  Identities=25%  Similarity=0.373  Sum_probs=77.3

Q ss_pred             cchhHHHHHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhcccCccccccchhhHHHhHHHHH
Q 015046          307 SSGIGSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVL  386 (414)
Q Consensus       307 ~~~~g~ilG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~~~~~~~l~~~lp~l~~s~~~~~  386 (414)
                      .+.++.++|.++.+||.+..+|||++|||+|+++|+|+.|++.|++|+++..++.+.......       -++.+...++
T Consensus         5 ~~~~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wligdi~nl~g~~l~~~~~~-------~~~~~~yy~~   77 (260)
T KOG2913|consen    5 NDTLSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLIGDIFNLVGFFLQPLGST-------LKVQAVYYTL   77 (260)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHHccHHHHHHHHhcccchh-------HHHHHHHHHH
Confidence            456889999999999999999999999999999999999999999999999998877644321       1233445578


Q ss_pred             HHHHHHHHhheecCCCCcc
Q 015046          387 LDSFILIQFIYYRYRSFQE  405 (414)
Q Consensus       387 lD~iil~Q~~~Y~~~~~~~  405 (414)
                      .|.+++.|++||+...+++
T Consensus        78 ~d~~l~~q~~yy~~~~~~~   96 (260)
T KOG2913|consen   78 ADSVLFVQCLYYGNIYPRE   96 (260)
T ss_pred             HHHHHHHHHHhcchhcccC
Confidence            8999999999999876633

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=98.87  E-value=1.2e-09  Score=72.68  Aligned_cols=32  Identities=63%  Similarity=1.093  Sum_probs=30.0

Q ss_pred             HhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhH
Q 015046           50 VAEVPQIITNYKEKSTEGLSIAFLTTWILGDL   81 (414)
Q Consensus        50 ~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~   81 (414)
                      ++++||+++|||+||++|+|+.|+++|+.||+
T Consensus         1 ~~~~PQi~~~~~~ks~~glS~~~~~l~~~G~~   32 (32)
T smart00679        1 VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI   32 (32)
T ss_pred             CcchhHHHHHHHcCCcCcCCHHHHHHHHhcCC
Confidence            36899999999999999999999999999984

Function unknown, but likely to be associated with the glycosylation machinery.

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=98.82  E-value=2.2e-09  Score=71.36  Aligned_cols=32  Identities=41%  Similarity=0.557  Sum_probs=29.9

Q ss_pred             hcchhhhhhHHhcCccCccCHHHHHHHHHHHH
Q 015046          324 GGRLPQICLNIRRGHVEGLNPLMFVFALVGNA  355 (414)
Q Consensus       324 ~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~  355 (414)
                      ++++||+++|||+|+++|+|+.|++++++|++
T Consensus         1 ~~~~PQi~~~~~~ks~~glS~~~~~l~~~G~~   32 (32)
T smart00679        1 VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI   32 (32)
T ss_pred             CcchhHHHHHHHcCCcCcCCHHHHHHHHhcCC
Confidence            47899999999999999999999999999974

Function unknown, but likely to be associated with the glycosylation machinery.

>COG4095 Uncharacterized conserved protein [Function unknown]

Probab=98.65  E-value=7.6e-08  Score=77.97  Aligned_cols=83  Identities=17%  Similarity=0.171  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhcccCccccccchhhHHHhHHHHHHHHH
Q 015046          311 GSYLGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSF  390 (414)
Q Consensus       311 g~ilG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~~~~~~~l~~~lp~l~~s~~~~~lD~i  390 (414)
                      -.++||+++.+...+++||.+|-+|.|+++++|+.||..-..|-.+++++        +++..++|-++.+..++.+..+
T Consensus         5 ~~viG~ia~ilttf~flPQ~iki~ktK~t~~Isl~~fii~~ia~~lwliy--------gILi~~lPii~aN~i~~il~li   76 (89)
T COG4095           5 IEVIGTIAGILTTFAFLPQLIKIIKTKNTASISLPMFIILNIALFLWLIY--------GILINDLPIIIANIISFILSLI   76 (89)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHH--------HHHHccCcchhHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999988873        3445689999999999999999


Q ss_pred             HHHHhheecCC
Q 015046          391 ILIQFIYYRYR  401 (414)
Q Consensus       391 il~Q~~~Y~~~  401 (414)
                      +++-...|..+
T Consensus        77 Il~~kI~~~~k   87 (89)
T COG4095          77 ILFYKIKYILK   87 (89)
T ss_pred             HHHHHHHHHHh
Confidence            99988877654

>COG4095 Uncharacterized conserved protein [Function unknown]

Probab=98.61  E-value=3.8e-07  Score=73.96  Aligned_cols=74  Identities=20%  Similarity=0.204  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHHHHHHH
Q 015046           36 VSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVI  110 (414)
Q Consensus        36 ~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~~~d~i  110 (414)
                      .-.+.|++...+-.++.+||.+|.+|.|+++++|+.|+.+-..|-.++++|+++.+ ++|..++..+.+.+--++
T Consensus         4 ~~~viG~ia~ilttf~flPQ~iki~ktK~t~~Isl~~fii~~ia~~lwliygILi~-~lPii~aN~i~~il~liI   77 (89)
T COG4095           4 FIEVIGTIAGILTTFAFLPQLIKIIKTKNTASISLPMFIILNIALFLWLIYGILIN-DLPIIIANIISFILSLII   77 (89)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHc-cCcchhHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999995 799988777666544333

>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []

Probab=98.22  E-value=1.6e-06  Score=70.55  Aligned_cols=82  Identities=15%  Similarity=0.150  Sum_probs=67.1

Q ss_pred             HHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhcccCccccccchhhHHHhHHHHHHHHHHHH
Q 015046          314 LGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILI  393 (414)
Q Consensus       314 lG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~~~~~~~l~~~lp~l~~s~~~~~lD~iil~  393 (414)
                      +|.+.+++-..+.+||+++.+|+|+++++|+.+++..++++.++...=+.        .++.+.++.+...+++.++.++
T Consensus         6 ~~~~~~i~~~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~YG~l--------~~d~~i~~~N~~g~~~~~~~~~   77 (87)
T PF03083_consen    6 LASVSSIIMFLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLIYGIL--------INDWPIIVPNVFGLVLSIIYLV   77 (87)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhhhhhh--------cCCeeEEeeHHHHHHHHHHHHh
Confidence            55666777788899999999999999999999999999999998873333        3344566777888899999999


Q ss_pred             HhheecCCCC
Q 015046          394 QFIYYRYRSF  403 (414)
Q Consensus       394 Q~~~Y~~~~~  403 (414)
                      -+++|.++++
T Consensus        78 ~~~~y~~~~~   87 (87)
T PF03083_consen   78 VYYIYPSKKK   87 (87)
T ss_pred             heEEeCCCCC
Confidence            9999987764

Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane

>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []

Probab=97.71  E-value=5.1e-05  Score=61.65  Aligned_cols=79  Identities=19%  Similarity=0.137  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhhhhhc
Q 015046           39 GLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYY  118 (414)
Q Consensus        39 ~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~~~d~il~~Q~~yY  118 (414)
                      ++|.++.++-.++.+||+++.+|+|+++++|+..++.-+++..+++.|+++.+ +.|.. ..-+..+++.++.+.-|++|
T Consensus         5 ~~~~~~~i~~~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~YG~l~~-d~~i~-~~N~~g~~~~~~~~~~~~~y   82 (87)
T PF03083_consen    5 ILASVSSIIMFLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLIYGILIN-DWPII-VPNVFGLVLSIIYLVVYYIY   82 (87)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhhhhhhcC-CeeEE-eeHHHHHHHHHHHHhheEEe
Confidence            45666667778888999999999999999999999999999999999999996 44443 23345566677777777777


Q ss_pred             c
Q 015046          119 S  119 (414)
Q Consensus       119 ~  119 (414)
                      .
T Consensus        83 ~   83 (87)
T PF03083_consen   83 P   83 (87)
T ss_pred             C
Confidence            5

Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane

>PHA02246 hypothetical protein

Probab=97.26  E-value=0.0018  Score=58.12  Aligned_cols=83  Identities=25%  Similarity=0.229  Sum_probs=65.5

Q ss_pred             hhHHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH
Q 015046           33 RDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILT  112 (414)
Q Consensus        33 ~~~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~~~d~il~  112 (414)
                      +..+++..|.++++   .+.+|||+.=||+|+.||.++++.++.-.|-.+-.+...+++ ..+..++++..-.++-++..
T Consensus       108 ~~evtQtVat~tIi---LaYi~QIIqfyKTK~SEg~n~~l~lii~~GL~~L~~~m~Lth-v~~hIiiTEf~N~iLiLiCy  183 (192)
T PHA02246        108 FTALTQTVATITII---LAYVTQITTFYKTKSAEGTNRFLFLIIGLGLASLIVSMVLTH-TYVHIIATEFVNFVLILICY  183 (192)
T ss_pred             hHHHHHHHHHHHHH---HHHHHHHHHHhhhcccCCCChhHHHHHHHHHHHHHHHHhhhC-CcceeeHHHHHHHHHHHHHH
Confidence            34556666666664   688999999999999999999999999999888888878875 45666666766666677777


Q ss_pred             hhhhhcc
Q 015046          113 AQTMYYS  119 (414)
Q Consensus       113 ~Q~~yY~  119 (414)
                      +|-=||+
T Consensus       184 ~qA~~Ys  190 (192)
T PHA02246        184 LQANYYS  190 (192)
T ss_pred             HHHhhhc
Confidence            7877776

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=97.24  E-value=0.0012  Score=62.00  Aligned_cols=73  Identities=23%  Similarity=0.166  Sum_probs=62.6

Q ss_pred             HHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhhhhhccc
Q 015046           47 SWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMYYSH  120 (414)
Q Consensus        47 ~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~~~d~il~~Q~~yY~~  120 (414)
                      +...+++|||.+|||+|++.-+|....++-+.|-+..+++.+.++ .-+.....-+...+++.++..|++.|+.
T Consensus       152 i~v~sr~~Qi~~n~~~~~tgqls~it~fLsf~g~lARiftsiq~t-~d~~mll~~v~s~~~Ng~i~aq~l~Y~s  224 (230)
T KOG3211|consen  152 IVVVSRLLQIQCNYHNRSTGQLSLITVFLSFGGCLARIFTSIQET-GDFLMLLRFVISLALNGLITAQVLRYWS  224 (230)
T ss_pred             hhhHHHHHHHHHHhcccccchhHHHHHHHHhhhHHHHHHHHHHhc-CChhhHHHHHHHHHHhHHHHHHHHHHHh
Confidence            556789999999999999999999999999999999999999985 3455544445667789999999999974

>KOG1623 consensus Multitransmembrane protein [General function prediction only]

Probab=97.08  E-value=0.0069  Score=58.65  Aligned_cols=81  Identities=19%  Similarity=0.089  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHhhhhh
Q 015046           38 LGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYYMAMLYTLTTVILTAQTMY  117 (414)
Q Consensus        38 ~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~~a~~~~~~d~il~~Q~~y  117 (414)
                      .++|.+..++-+++.+|-.++.+|+||+||.|..=+++-+++..+++-|+++..+.....++. ..-+++..+-+.-|+|
T Consensus        10 ~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~llitIN-~~G~~ie~~Yi~~f~~   88 (243)
T KOG1623|consen   10 GILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDYLLITIN-GIGLVIETVYISIFLY   88 (243)
T ss_pred             HHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCceEEEEEe-hhcHHHHHHHHHHHhe
Confidence            344445555556888899999999999999999999999999999999998875223332222 3345555666677888


Q ss_pred             cc
Q 015046          118 YS  119 (414)
Q Consensus       118 Y~  119 (414)
                      |.
T Consensus        89 ya   90 (243)
T KOG1623|consen   89 YA   90 (243)
T ss_pred             ec
Confidence            85

>PHA02246 hypothetical protein

Probab=97.05  E-value=0.016  Score=52.20  Aligned_cols=64  Identities=20%  Similarity=0.168  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHHHHhcCCCchHHHH
Q 015046           35 GVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFGCLLEPATLPTQYY   99 (414)
Q Consensus        35 ~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g~~l~~~~lp~q~~   99 (414)
                      -++-.+...-+..-.+..+||+-.-+|.|+.+|.|-+|-.+-..--.+.+...+.++ .--||+.
T Consensus         3 ~~~~~~s~~yailit~gYipgL~slvk~~nv~GvS~~FWYLi~~tvgiSfyNlL~T~-~~~fqi~   66 (192)
T PHA02246          3 NLSHYLSILYAILITVGYIPGLVALVKAESVKGVSNYFWYLIVATVGISFYNLLLTD-ASVFQIV   66 (192)
T ss_pred             hHHHHHHHHHHHHHHhhhhhhHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEe
Confidence            345566666677778889999999999999999999886666555555555555554 4556654

>KOG1623 consensus Multitransmembrane protein [General function prediction only]

Probab=95.04  E-value=0.043  Score=53.22  Aligned_cols=83  Identities=17%  Similarity=0.277  Sum_probs=59.1

Q ss_pred             HHHHHHHHHhhcchhhhhhHHhcCccCccCHHHHHHHHHHHHHHHHHHhhcccCccccccchhhHHHhHHHHHHHHHHHH
Q 015046          314 LGWAMAAIYMGGRLPQICLNIRRGHVEGLNPLMFVFALVGNATYVASILVNSVDWSRIRPNLPWLADAGGCVLLDSFILI  393 (414)
Q Consensus       314 lG~is~~l~~~sriPQI~~NyrrKSt~GlS~~~~~~~~~Gn~~y~~si~~~~~~~~~l~~~lp~l~~s~~~~~lD~iil~  393 (414)
                      +|-+..++-+.+.+|=.++-+||||+||.|..-|++.+++..+|.-.=+....  +++     .+.-+...+++..+.+.
T Consensus        12 ~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~--d~l-----litIN~~G~~ie~~Yi~   84 (243)
T KOG1623|consen   12 LGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVH--DYL-----LITINGIGLVIETVYIS   84 (243)
T ss_pred             HHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccC--ceE-----EEEEehhcHHHHHHHHH
Confidence            34444445567889999999999999999999999999999998753323222  222     22234555677777777


Q ss_pred             HhheecCCCC
Q 015046          394 QFIYYRYRSF  403 (414)
Q Consensus       394 Q~~~Y~~~~~  403 (414)
                      -|++|..+++
T Consensus        85 ~f~~ya~~k~   94 (243)
T KOG1623|consen   85 IFLYYAPKKK   94 (243)
T ss_pred             HHheecCchh
Confidence            7888887766

>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway

Probab=85.03  E-value=2.7  Score=37.80  Aligned_cols=55  Identities=18%  Similarity=0.001  Sum_probs=47.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhhCCCCCcCHHHHHHHHHhhHHHHHH
Q 015046           32 VRDGVSLGLGLASVISWGVAEVPQIITNYKEKSTEGLSIAFLTTWILGDLFNVFG   86 (414)
Q Consensus        32 ~~~~~s~~lG~is~~~w~~~~lPQI~~N~r~KS~eGLS~~fl~~wl~Gd~~nl~g   86 (414)
                      ....+.+++...|+.+..++.+||++.-.|++.+|.+...+++.--+.=++++++
T Consensus        88 ~~~~~~ei~wtfSi~LEsvAIlPQL~m~~k~~~ve~ltshYv~~Lg~yR~ly~~~  142 (147)
T PF00810_consen   88 NSFFFLEILWTFSIYLESVAILPQLFMLQKTGEVENLTSHYVFALGLYRALYLLN  142 (147)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhHHHHHHHHhcCeeehHHHHHHHHHHHHHHHHHH
Confidence            5668899999999999999999999999999999999999887776666666554

The receptor for this signal is a ~26 kDa Golgi membrane protein, initially identified as the ERD2 gene product in S. cerevisiae. The receptor molecule, known variously as the ER lumen protein retaining receptor or the 'KDEL receptor', is believed to cycle between the cis side of the Golgi apparatus and the ER. It has also been characterised in a number of other species, including plants, Plasmodium, Drosophila and mammals. In mammals, 2 highly related forms of the receptor are known. The KDEL receptor is a highly hydrophobic protein of 220 residues; its sequence exhibits 7 hydrophobic regions, all of which have been suggested to traverse the membrane []. More recently, however, it has been suggested that only 6 of these regions are transmembrane (TM), resulting in both N- and C-termini on the cytoplasmic side of the membrane.; GO: 0046923 ER retention sequence binding, 0006621 protein retention in ER lumen, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00