Citrus Sinensis ID: 015055


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----
MGIEVTDVCMDKEADCVIVYSNGVSHDSDHETIPNHHDVAGPFEHFDGDPQLQSLVESTEVKEYEVKECTSETSIEVEKGKEEQNVVSSMPEAGLPAEKTKPEDVKTKENNKSHLVVKHASKATAGNVRTKHTIPQPFSLATEKRASNGTRPTAAELKSVNKSSNTNSLRHLNSKKQNQVASATESRFPIFFPVKPPLVPRKPLQPNNKKLPDEEDSCSVASSTAASVRTVKSRIIVAAAPTFRCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKKMPPTRAKSPKLGRRKSCSDAASLNQGDQVKGTSRTGNRQSLGNYREDTTLFSTDKKDPSNIPNGHVICKLQDNPKLAEDIMAPKVNVHSNPEIGVVFQP
ccccccccccccccccEEEccccccccccccccccccccccccccccccccccHHHcccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccEEEccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccEEEccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccEEcccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccEEEcc
mgievtdvcmdkeaDCVIVysngvshdsdhetipnhhdvagpfehfdgdpqlqslvestevkeyevkectsetsIEVEkgkeeqnvvssmpeaglpaektkpedvktkennksHLVVKHAskatagnvrtkhtipqpfslatekrasngtrptaaELKSVNKSSNTNSLRHLNskkqnqvasatesrfpiffpvkpplvprkplqpnnkklpdeedscsvaSSTAASVRTVKSRIIVaaaptfrcteRAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLtfkaspmpsfyhdgpppkvelkkmpptrakspklgrrkscsdaaslnqgdqvkgtsrtgnrqslgnyredttlfstdkkdpsnipnghvicklqdnpklaedimapkvnvhsnpeigvvfqp
mgievtdvcmdkeADCVIVYSNGVSHDSDHETIPNHHDVAGPFEHFDGDPQLQSLVESTEvkeyevkectsetsievekgkeeqnvvssmpeaglpaektkpedvktkennkshlvvkhaskatagnvrtkhtipqpfslatekrasngtrptaaelksvnkssntnslrhlnskkqnqvaSATESRFPIFFPVKPPLVPRKPLQPnnkklpdeedSCSVASStaasvrtvksriivaaaptfrcteraEKRKEFYSKLEEKHQAleaeksqseartkEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKKMPptrakspklgrrkscsdaaslnqgdqvkgtsrtgnrqslgnyredttlfstdkkdpsnipNGHVICKLQDNPKLAEDIMAPkvnvhsnpeigvvfqp
MGIEVTDVCMDKEADCVIVYSNGVSHDSDHETIPNHHDVAGPFEHFDGDPQLQSLVESTEVKEYEVKECTSETSIEVEKGKEEQNVVSSMPEAGLPAEKTKPEDVKTKENNKSHLVVKHASKATAGNVRTKHTIPQPFSLATEKRASNGTRPTAAELKSVNKSSNTNSLRHLNSKKQNQVASATESRFPIFFpvkpplvprkplqpNNKKLPDEEDscsvasstaasvrtvksRIIVAAAPTFRCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKKMPPTRAKSPKLGRRKSCSDAASLNQGDQVKGTSRTGNRQSLGNYREDTTLFSTDKKDPSNIPNGHVICKLQDNPKLAEDIMAPKVNVHSNPEIGVVFQP
****VTDVCMDKEADCVIVYSNGV*********************************************************************************************************************************************************************IFF*************************************TVKSRIIVAAAPTFRCT*************************************************************************************************************************************HVICKLQ****************************
*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************VVF**
MGIEVTDVCMDKEADCVIVYSNGVSHDSDHETIPNHHDVAGPFEHFDGDPQLQSLVESTEV******************************EAGLPAEKTKPEDVKTKENNKSHLVVKHASKATAGNVRTKHTIPQPFSLATEKRASNGTRPTAAELKSVNKSSNTNSLRHL************ESRFPIFFPVKPPLVPRKPLQPNN********************RTVKSRIIVAAAPTFRCTERAEKRKEFYSKLEEKH********************AIKQLRKSLTFKASPMPSFYHDGPPPKVELKKM**********************************GNRQSLGNYREDTTLFSTDKKDPSNIPNGHVICKLQDNPKLAEDIMAPKVNVHSNPEIGVVFQP
**IEVTDVCMDKEADCVIVYSN*************************************************************************************************************************************************************************************************************************APTFRCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKK**P********************************************************NIPNGHVICKLQDN****EDIMAPKVNVHSNPEIGVVFQP
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MGIEVTDVCMDKEADCVIVYSNGVSHDSDHETIPNHHDVAGPFEHFDGDPQLQSLVESTEVKEYEVKECTSETSIEVEKGKEEQNVVSSMPEAGLPAEKTKPEDVKTKENNKSHLVVKHASKATAGNVRTKHTIPQPFSLATEKRASNGTRPTAAELKSVNKSSNTNSLRHLNSKKQNQVASATESRFPIFFPVKPPLVPRKPLQPNNKKLPDEEDSCSVASSTAASVRTVKSRIIVAAAPTFRCTERxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAIKQLRKSLTFKASPMPSFYHDGPPPKVELKKMPPTRAKSPKLGRRKSCSDAASLNQGDQVKGTSRTGNRQSLGNYREDTTLFSTDKKDPSNIPNGHVICKLQDNPKLAEDIMAPKVNVHSNPEIGVVFQP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query414 2.2.26 [Sep-21-2011]
Q8GYX9286 Protein WVD2-like 1 OS=Ar no no 0.391 0.566 0.585 6e-42
Q84ZT9202 Protein WAVE-DAMPENED 2 O no no 0.338 0.693 0.593 4e-37
>sp|Q8GYX9|WDL1_ARATH Protein WVD2-like 1 OS=Arabidopsis thaliana GN=WDL1 PE=2 SV=1 Back     alignment and function desciption
 Score =  172 bits (435), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 120/164 (73%), Gaps = 2/164 (1%)

Query: 196 PPLVPRKPLQPNNKKLPDEEDSCSVASSTAASVRTVKSRIIVAAAPTFRCTERAEKRKEF 255
           P L  RKPLQP NKK  D+ED+CS+ASS A S+R  KS +   +APTFR  +RAEKRKE+
Sbjct: 81  PLLAVRKPLQPENKKHIDDEDNCSIASSVATSMRMGKSGLTYGSAPTFRSAQRAEKRKEY 140

Query: 256 YSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKK 315
           Y KLEEK+QALEAE+++ E R K+E EAA+KQLRK+L FKA P+P+FY++ PP K ELKK
Sbjct: 141 YQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKAKPVPNFYYEAPPAKPELKK 200

Query: 316 MPPTRAKSPK--LGRRKSCSDAASLNQGDQVKGTSRTGNRQSLG 357
           +P TR KSPK  L RRKS SDA S +  +++  T    NR S G
Sbjct: 201 LPLTRPKSPKLILSRRKSFSDAVSSSSREEILKTVSNRNRHSTG 244




Microtubule-associated protein (MAP) that regulates the orientation of interphase cortical microtubules. Modulates both rotational polarity and anisotropic cell expansion during organ growth. Promotes clockwise root and etiolated hypocotyls coiling, clockwise leaf curling, but left-handed petiole twisting.
Arabidopsis thaliana (taxid: 3702)
>sp|Q84ZT9|WVD2_ARATH Protein WAVE-DAMPENED 2 OS=Arabidopsis thaliana GN=WVD2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query414
297737172450 unnamed protein product [Vitis vinifera] 0.908 0.835 0.621 1e-123
225432945412 PREDICTED: uncharacterized protein LOC10 0.905 0.910 0.627 1e-123
255551931391 conserved hypothetical protein [Ricinus 0.925 0.979 0.607 1e-122
118482393404 unknown [Populus trichocarpa] 0.905 0.928 0.603 1e-119
224107901409 predicted protein [Populus trichocarpa] 0.905 0.916 0.594 1e-117
224102173387 predicted protein [Populus trichocarpa] 0.905 0.968 0.580 1e-115
449465376393 PREDICTED: uncharacterized protein LOC10 0.816 0.860 0.548 9e-92
363806656392 uncharacterized protein LOC100798109 [Gl 0.915 0.966 0.507 2e-91
358248926388 uncharacterized protein LOC100797456 [Gl 0.915 0.976 0.507 1e-89
357441027383 hypothetical protein MTR_1g075310 [Medic 0.864 0.934 0.476 5e-85
>gi|297737172|emb|CBI26373.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/399 (62%), Positives = 293/399 (73%), Gaps = 23/399 (5%)

Query: 1   MGIEVTDVCMDKEADCVIVYSNGVSHDSDHETIPNHHDVAGPFEHFDGDPQLQSLVESTE 60
           MG+EVTD+CMD E +CV++YSNGVS DS HET P HHD A  ++H +GDP+ Q L E  E
Sbjct: 39  MGMEVTDICMDNEPNCVMIYSNGVSCDSSHETAPIHHDFAESYKHINGDPEPQILEEKVE 98

Query: 61  VKEYEVKECTSETSIEVEK-----GKEEQNVVSSMPEAGLPAEKTKPEDVKTKENNKSHL 115
            KEYEVKECT+E+S+E+ +       EEQ   SS  EA LP EK K E  K+K++ K   
Sbjct: 99  GKEYEVKECTTESSVEISQLCQVEKCEEQEKPSSNFEADLPEEKVKSEVPKSKDDKKLKS 158

Query: 116 VVKHASKATAGNVRTKHTIPQPFSLATEKRASNGTRP--TAAELKSV-NKSSNTNSLRHL 172
            VK ASK   G+ RT +T+PQPF+LATEKRAS GTRP  T +++ +V NKSS T +L+  
Sbjct: 159 SVKPASKPAVGSARTNYTVPQPFALATEKRASCGTRPFGTESDVGTVANKSSITKNLQTP 218

Query: 173 NSKKQNQVASATESRFPIFFPVKPPLVPRKPLQPNNKKLPDEEDSCSVASSTAASVRTVK 232
            + K NQ  S               LVPRKPL+P+NKK PDEEDSCSV SSTA S RTVK
Sbjct: 219 TATKHNQQTSL--------------LVPRKPLEPDNKKHPDEEDSCSVTSSTAPSARTVK 264

Query: 233 SRIIVAAAPTFRCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSL 292
           SR IVA+AP FRCT RAEKRKEFYSKLEEKHQALEAEK+Q EARTKEE EAAIKQLRKSL
Sbjct: 265 SRAIVASAPVFRCTARAEKRKEFYSKLEEKHQALEAEKNQCEARTKEEREAAIKQLRKSL 324

Query: 293 TFKASPMPSFYHDGPPPKVELKKMPPTRAKSPKLGRRKSCSDAASLNQGDQVKGTSRTGN 352
            FKASPMPSFYH+GPPPK ELKK+PPTRAKSPKLGRRKSCSDA S +QGD+ K +   GN
Sbjct: 325 MFKASPMPSFYHEGPPPKAELKKLPPTRAKSPKLGRRKSCSDAVSFSQGDKGKESRGRGN 384

Query: 353 RQSLGNYREDT-TLFSTDKKDPSNIPNGHVICKLQDNPK 390
           RQSLG+++EDT T+ +T+ KD  NI NG+   K +D  K
Sbjct: 385 RQSLGSHKEDTSTIRTTNSKDQINIQNGNASFKFKDESK 423




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432945|ref|XP_002284360.1| PREDICTED: uncharacterized protein LOC100258034 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255551931|ref|XP_002517010.1| conserved hypothetical protein [Ricinus communis] gi|223543645|gb|EEF45173.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|118482393|gb|ABK93119.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224107901|ref|XP_002314647.1| predicted protein [Populus trichocarpa] gi|222863687|gb|EEF00818.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224102173|ref|XP_002312576.1| predicted protein [Populus trichocarpa] gi|222852396|gb|EEE89943.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449465376|ref|XP_004150404.1| PREDICTED: uncharacterized protein LOC101216353 [Cucumis sativus] Back     alignment and taxonomy information
>gi|363806656|ref|NP_001242515.1| uncharacterized protein LOC100798109 [Glycine max] gi|255639491|gb|ACU20040.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|358248926|ref|NP_001239708.1| uncharacterized protein LOC100797456 [Glycine max] gi|255647775|gb|ACU24348.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357441027|ref|XP_003590791.1| hypothetical protein MTR_1g075310 [Medicago truncatula] gi|355479839|gb|AES61042.1| hypothetical protein MTR_1g075310 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query414
TAIR|locus:2094583338 AT3G23090 "AT3G23090" [Arabido 0.533 0.653 0.472 6.9e-55
TAIR|locus:2020048338 AT1G54460 "AT1G54460" [Arabido 0.446 0.547 0.427 2.2e-40
TAIR|locus:2084878286 WDL1 "AT3G04630" [Arabidopsis 0.362 0.524 0.513 1.5e-37
TAIR|locus:504955059202 WVD2 "AT5G28646" [Arabidopsis 0.342 0.702 0.532 6.4e-37
TAIR|locus:2127771437 AT4G32330 "AT4G32330" [Arabido 0.318 0.302 0.511 5.5e-32
TAIR|locus:2039235432 AT2G35880 "AT2G35880" [Arabido 0.574 0.550 0.359 6.2e-30
TAIR|locus:2040090403 AT2G25480 "AT2G25480" [Arabido 0.231 0.238 0.614 1.4e-25
TAIR|locus:2013985478 AT1G70950 "AT1G70950" [Arabido 0.195 0.169 0.567 5.4e-19
TAIR|locus:2082364391 AT3G01710 "AT3G01710" [Arabido 0.159 0.168 0.402 0.00013
TAIR|locus:2092115533 AT3G26050 "AT3G26050" [Arabido 0.289 0.225 0.278 0.00058
TAIR|locus:2094583 AT3G23090 "AT3G23090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 462 (167.7 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
 Identities = 111/235 (47%), Positives = 134/235 (57%)

Query:   145 RASNGTRPTAAELKSVNKSSNTNSLRHLNSKKQNQVASATESRFPIFFXXXXXXXXXXXX 204
             R +N TR T  +  S+      +S R   S+    + SA   +FP               
Sbjct:    98 RGNNKTRNTVPQPFSLATEKRASSTRSFTSES---LESAGLKKFPDGHSKVQSQATKVPR 154

Query:   205 XX---NNKKLPDEEDXXXXXXXXXXXXXXXXXRIIVAAAPTFRCTERAEKRKEFYSKLEE 261
                   NKKL DEED                 R +V AAP+FR TERAEKRKEFY+KLEE
Sbjct:   155 KPLQPKNKKLSDEEDSCSVASYATSGAKSAKSRTVVTAAPSFRSTERAEKRKEFYTKLEE 214

Query:   262 KHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPMPSFYHDGPPPKVELKKMPPTRA 321
             KHQA+EAEK+QSEAR KE TEAA++QLRKSL FKA+PMP FYH+GPPPKVELKK  PTRA
Sbjct:   215 KHQAMEAEKTQSEARNKEATEAALRQLRKSLRFKANPMPKFYHEGPPPKVELKKPLPTRA 274

Query:   322 KSPKLGRRKSCSDAASLNQGDQVKGTSRTGN-RQSLGNYREDTTLFSTDKKDPSN 375
             KSPKLGRR          +G++ KG SR    R++L   +ED    +T   D  N
Sbjct:   275 KSPKLGRRNP-------KEGNRAKGASRRHETRKTLVISKEDHDDETTRNADQIN 322


GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0006826 "iron ion transport" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2020048 AT1G54460 "AT1G54460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084878 WDL1 "AT3G04630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955059 WVD2 "AT5G28646" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127771 AT4G32330 "AT4G32330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039235 AT2G35880 "AT2G35880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040090 AT2G25480 "AT2G25480" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013985 AT1G70950 "AT1G70950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082364 AT3G01710 "AT3G01710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092115 AT3G26050 "AT3G26050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query414
pfam0688657 pfam06886, TPX2, Targeting protein for Xklp2 (TPX2 5e-20
>gnl|CDD|191634 pfam06886, TPX2, Targeting protein for Xklp2 (TPX2) Back     alignment and domain information
 Score = 82.8 bits (205), Expect = 5e-20
 Identities = 38/57 (66%), Positives = 42/57 (73%)

Query: 243 FRCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPM 299
               ERAEKR EF  KLEEK +ALEAEK ++EAR KEE E AIKQLRK L  KA+PM
Sbjct: 1   LHSDERAEKRAEFDKKLEEKEKALEAEKEEAEARQKEEEEEAIKQLRKELVPKANPM 57


This family represents a conserved region approximately 60 residues long within the eukaryotic targeting protein for Xklp2 (TPX2). Xklp2 is a kinesin-like protein localised on centrosomes throughout the cell cycle and on spindle pole microtubules during metaphase. In Xenopus, it has been shown that Xklp2 protein is required for centrosome separation and maintenance of spindle bi-polarity. TPX2 is a microtubule-associated protein that mediates the binding of the C-terminal domain of Xklp2 to microtubules. It is phosphorylated during mitosis in a microtubule-dependent way. Length = 57

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 414
PF0688657 TPX2: Targeting protein for Xklp2 (TPX2); InterPro 99.79
>PF06886 TPX2: Targeting protein for Xklp2 (TPX2); InterPro: IPR009675 This family represents a conserved region approximately 60 residues long within the eukaryotic targeting protein for Xklp2 (TPX2) Back     alignment and domain information
Probab=99.79  E-value=2e-19  Score=138.09  Aligned_cols=57  Identities=63%  Similarity=0.824  Sum_probs=56.4

Q ss_pred             ccchhHHHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhcccccCCC
Q 015055          243 FRCTERAEKRKEFYSKLEEKHQALEAEKSQSEARTKEETEAAIKQLRKSLTFKASPM  299 (414)
Q Consensus       243 frsdERAeKRKEFy~KLEEK~~AkE~EK~qleAKsKEEeEaeIKqLRKSL~FKA~Pm  299 (414)
                      |+||+||++|+|||.+|+||++++|+++.++++++++++|++|++|||+|+|||+||
T Consensus         1 l~t~~RA~~R~eF~~kl~EK~~~~e~~~~~~e~~~~e~ee~eik~LRk~lv~kA~Pm   57 (57)
T PF06886_consen    1 LHTDERAEERKEFDKKLEEKEKAKEAEKEEREAKQKEEEEEEIKQLRKELVFKAQPM   57 (57)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence            799999999999999999999999999999999999999999999999999999998



Xklp2 is a kinesin-like protein localised on centrosomes throughout the cell cycle and on spindle pole microtubules during metaphase. In Xenopus, it has been shown that Xklp2 protein is required for centrosome separation and maintenance of spindle bi-polarity []. TPX2 is a microtubule-associated protein that mediates the binding of the C-terminal domain of Xklp2 to microtubules. It is phosphorylated during mitosis in a microtubule-dependent way [].


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00