Citrus Sinensis ID: 015152

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
Protein Sequence
MKQATFRSKILPPSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGWPNS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccHHHHcccccccccccHHHHccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccHcccccccccccccccc
Coil and Loop (DISEMBL)
mkqatfrskilppshfipktllklqpsittltfpskspnpltfktlsclesqsqsetkTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRvilslippVIAFTMVAVVIASYNSaldshllpgflpvlrasslpyqltAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVIsgtdnstdecIKDSLLRYIMAFPVALKghvicdsdvsgdlqdlldaddlaivldskhrprCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCeqlmgipiplsytrLTSRFLVLWHLTlpiilwddchwivvPATFISAASLFCIEEVgvlieepfpmlALDELCNLVQSNIQEAIATQKVIQAQVSAkrkshsyqhcangwpns
Flexible Loop (DISEMBL)
mkqatfrskilppshfipKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTLTLISVlraipdwadrvkergvkqkrtlyshekwvehrsslRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQAQVSAKrkshsyqhcangwpns
Low Complexity Region (SEG)
MKQATFRSKILPPSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHrsslrhvrhllsslssrvilsliPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGdlqdlldaddlaivldSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGWPNS
Disordered region (IsUnstruct)
**************HFIPKTLLKLQPSITTLTF************L***********KTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQA*********************
Disordered Region (DISOPRED)
************************************************************************************RTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQ**************************
Disordered Region (DISEMBL)
MKQATFRSKILPPSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKV****************CANGWPNS
Disordered Region (DISPRO)
*******SKILPPSHFIPKTLLKLQPSITTLTF**********KTLSCLE****SETKTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQ**********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKQATFRSKILPPSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGWPNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	412	2.2.26 [Sep-21-2011]
Q9M2D2	410	UPF0187 protein At3g61320	yes	no	0.956	0.960	0.695	1e-148
O80832	410	UPF0187 protein At2g45870	no	no	0.917	0.921	0.664	1e-140
P72926	307	UPF0187 protein sll1024 O	N/A	no	0.529	0.710	0.283	1e-18
Q8YSU5	307	UPF0187 protein alr2987 O	yes	no	0.611	0.820	0.275	1e-16
Q8XTY1	306	UPF0187 protein RSc3414 O	yes	no	0.640	0.862	0.228	4e-13
Q8XAZ3	304	UPF0187 protein YneE OS=E	N/A	no	0.633	0.858	0.232	2e-09
Q98E66	309	UPF0187 protein mll4386 O	yes	no	0.652	0.870	0.219	3e-09
P76146	304	UPF0187 protein YneE OS=E	N/A	no	0.633	0.858	0.229	4e-09
Q8ZPI0	304	UPF0187 protein YneE OS=S	yes	no	0.575	0.779	0.204	7e-09
Q8Z706	304	UPF0187 protein YneE OS=S	N/A	no	0.575	0.779	0.204	7e-09

>sp|Q9M2D2|YU88_ARATH UPF0187 protein At3g61320, chloroplastic OS=Arabidopsis thaliana GN=At3g61320 PE=2 SV=2

 Score =  526 bits (1354), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/397 (69%), Positives = 325/397 (81%), Gaps = 3/397 (0%)

Query: 14  SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDW 72
           S+F  ++LL+ +  I +  F  KS N    +  S  ES  S  ET T  LI +LRA+PDW
Sbjct: 11  SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDW 69

Query: 73  ADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVI 132
           AD +KERG++QKR+LY+HEKWVEHRSSLRHVRHLLSS SSRVILSLIPPV  FT VAVVI
Sbjct: 70  ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 129

Query: 133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
           ASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW  IIA
Sbjct: 130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189

Query: 193 GTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDL 251
           GTND A  VI   D+S DE  IKD LLRYI AFPVALK HVI  SD++ DL++L++ADDL
Sbjct: 190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249

Query: 252 AIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSY 311
           +++L +KHRPRC+IEFISQS+QLL L+  K+++LESK+   HEGIGVCEQLMGIPIPLSY
Sbjct: 250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSY 309

Query: 312 TRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 371
           TRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL
Sbjct: 310 TRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 369

Query: 372 CNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
           C+LV SNIQEA+ ++KVI+ ++ AK K H ++H +NG
Sbjct: 370 CDLVHSNIQEAVKSEKVIRNRIIAKIKLHEFKHSSNG 406

Arabidopsis thaliana (taxid: 3702)

>sp|O80832|YU87_ARATH UPF0187 protein At2g45870, chloroplastic OS=Arabidopsis thaliana GN=At2g45870 PE=2 SV=1

 Score =  498 bits (1281), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/382 (66%), Positives = 313/382 (81%), Gaps = 4/382 (1%)

Query: 35  SKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIPDWADRVKERGVKQKRTLYSHE 91
           +++P  L FK   SC+ S  +S+   L+  LIS+L+A+P+W+D +KER ++QKR+LY+HE
Sbjct: 29  ARAPKSLHFKFNPSCVSSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHE 88

Query: 92  KWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVL 151
            WV HRSSLRH+RH+ SS SSRVILSLIPPV  FT VA++IA YNSA+D   LP F PVL
Sbjct: 89  NWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAILIAGYNSAVDLDWLPDFFPVL 148

Query: 152 RASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE 211
           RAS LPYQLTAPALALLLVFRTEASYSRF  G+KAW +II+GTND A +VIS    S DE
Sbjct: 149 RASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDE 208

Query: 212 -CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQ 270
             I+D+LLRYI+AFPVALK HVI  SD++ DL+++++ DDL+++L SKHRPRC+I+FISQ
Sbjct: 209 LIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQFISQ 268

Query: 271 SLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIIL 330
           SLQLLNL++TK +MLE+K+    EGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLP+IL
Sbjct: 269 SLQLLNLDSTKIDMLETKMMQLQEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPVIL 328

Query: 331 WDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQ 390
           WDDCHW VVPATFISAASLFCIEEVGVLIEEPF MLALDELC +V SN  EA+ +++VI+
Sbjct: 329 WDDCHWNVVPATFISAASLFCIEEVGVLIEEPFSMLALDELCAMVLSNSDEAVESKEVIR 388

Query: 391 AQVSAKRKSHSYQHCANGWPNS 412
            ++ AK++    +H +NGW  S
Sbjct: 389 NRIIAKKRILEIKHSSNGWHKS 410

Arabidopsis thaliana (taxid: 3702)

>sp|P72926|Y1024_SYNY3 UPF0187 protein sll1024 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1024 PE=3 SV=2

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 11/229 (4%)

Query: 165 LALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSL--LRYIM 222
           L LLLVFRT  +Y RF +G+KAW  ++    + + ++       + +  +D +  L  ++
Sbjct: 68  LGLLLVFRTNTAYERFWEGRKAWGTMVNTIRNLSRIIWVSVAEPSPQAHQDKIKILHLLV 127

Query: 223 AFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLL----NLE 278
           AF VA K H +    ++ ++  LL       + D  + P  I  +IS  LQ      N+ 
Sbjct: 128 AFAVATKLH-LRSQPLNEEIWALLPESGYRKLEDLNNPPLEIAFWISNYLQREYDQNNIN 186

Query: 279 ATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIV 338
           A +   +   +    + +G CE+++  PIPL+Y     + + L+    P  + +  HW  
Sbjct: 187 AYQLTAMLRLVDTMVDVLGSCERILKTPIPLAYAIHLRQLIFLYCFITPFQIVNTLHWAT 246

Query: 339 VPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAI 383
                I A ++F IEE+GV IE PF      L LD++C  +Q+N+++ I
Sbjct: 247 AFVVGIIAFTVFGIEEIGVEIENPFGHDANDLPLDQICQTMQANLEDLI 295

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q8YSU5|Y2987_NOSS1 UPF0187 protein alr2987 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2987 PE=3 SV=1

 Score = 87.8 bits (216), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)

Query: 123 IAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPA-------------LALLL 169
           IAF +   VI +    +    L G L      +L YQL  P              L LLL
Sbjct: 11  IAFQLRGSVIGAIYKRVICCALFGVL-----VTLLYQLKIPVSQPILGSVIPSIVLGLLL 65

Query: 170 VFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNST--DECIKDSLLRYIMAFPVA 227
           VFRT  +Y RF +G+KAW  I+  T + A  +    +  +  D   K S+L  ++AF VA
Sbjct: 66  VFRTNTAYDRFWEGRKAWGSIVNNTRNLARQIWVSVEEVSLKDREAKISVLNLLVAFAVA 125

Query: 228 LKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRC-----IIEFISQSLQLLNLEATKQ 282
            K H+  +  ++ +L+DL+        L S + P       I +++ Q      L + + 
Sbjct: 126 TKLHLRGEP-INSELEDLISTSRY-FKLKSMNNPPLEVAFWIGDYLQQQYTCKCLNSYQL 183

Query: 283 NMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPAT 342
             ++  ++   + +G CE+++  P+PL+Y+    + L+L+   LP  + +   W      
Sbjct: 184 TSIQELLNNLVDNLGSCERILRTPMPLAYSIHLKQLLLLYCFLLPFQMVESLGWWTGLVV 243

Query: 343 FISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQE 381
            + + +LF IE +G+ IE PF      L LD +CN ++ NI +
Sbjct: 244 GLVSFTLFGIEAIGLEIENPFGYDPNDLPLDAICNTMKRNIDD 286

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q8XTY1|Y3414_RALSO UPF0187 protein RSc3414 OS=Ralstonia solanacearum (strain GMI1000) GN=RSc3414 PE=3 SV=1

 Score = 76.6 bits (187), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 12/276 (4%)

Query: 117 SLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEAS 176
           S++P ++    +   I+    A+  H LP     +  S+ P+ L   ALA+ L FR  AS
Sbjct: 19  SVLPQLLPRLFLIFCISLVAMAVHVHWLP---ITVNLSTTPFSLIGIALAVFLGFRNNAS 75

Query: 177 YSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDS 236
           Y R+ + +K W Q++          ++    +         ++ + A P AL+ H +  +
Sbjct: 76  YDRYWEARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVLGALPHALR-HQLRRT 134

Query: 237 DVSGDLQDLLDADDLAIVLDSKHRPRCII----EFISQSLQLLNLEATKQNMLESKISCF 292
           D   DL   L A     V+ S++RP  ++    E++ Q  +  +L+A      +  +   
Sbjct: 135 DPRDDLSARLPAPLFERVMASRYRPAALMLWLGEWVRQRSREGSLDAWAVLAFDRNLGSL 194

Query: 293 HEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCI 352
              IG CE+++  P+P +Y+ +  R +  +   LP  L +         +   A +    
Sbjct: 195 SNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFTPVFSVFVAYAFMAH 254

Query: 353 EEVGVLIEEPFPM----LALDELCNLVQSNIQEAIA 384
           E +   IEEPF      LAL+ +  +++  +++ I 
Sbjct: 255 EAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIG 290

Ralstonia solanacearum (strain GMI1000) (taxid: 267608)

>sp|Q8XAZ3|YNEE_ECO57 UPF0187 protein YneE OS=Escherichia coli O157:H7 GN=yneE PE=3 SV=2

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 44/305 (14%)

Query: 106 LLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPAL 165
           +LS +SSR++L+ +     F++  + +  + + L           ++ +  P+ +   A+
Sbjct: 20  VLSKISSRLLLNFL-----FSIAVIFMLPWYTHLG----------IKFTLAPFSILGVAI 64

Query: 166 ALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFP 225
           A+ L FR  A Y+R+V+ +K W Q++  +      V +   +S          R  +AF 
Sbjct: 65  AIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSAS---VREFARLQIAFA 121

Query: 226 VALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNM- 284
             L+  +     V   L   L  +DL  VL S      I+  + + L +        ++ 
Sbjct: 122 HCLRMTLRKQPQVEV-LAHYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDIL 180

Query: 285 ---LESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW----- 336
              L  +++     +  CE++   PIP +YT +  R + L+ + LP  L  D H+     
Sbjct: 181 FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI 240

Query: 337 -IVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKVIQA 391
            +++  TFI   SL C+ E    +E+PF      L LD +CN ++ ++      Q   +A
Sbjct: 241 SVLISYTFI---SLDCLAEE---LEDPFGTENNDLPLDAICNAIEIDL-----LQMNDEA 289

Query: 392 QVSAK 396
           ++ AK
Sbjct: 290 EIPAK 294

Escherichia coli O157:H7 (taxid: 83334)

>sp|Q98E66|Y4386_RHILO UPF0187 protein mll4386 OS=Rhizobium loti (strain MAFF303099) GN=mll4386 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 18/287 (6%)

Query: 105 HLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPA 164
            L   +   V+  ++P +  F + + VI +     +  L  G   +      P+ L    
Sbjct: 19  QLFFIMRGSVVPRILPQIFGFAVYSAVILALARWFELDL--GVFNIT-----PFGLVGVT 71

Query: 165 LALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAF 224
           L++ L FR  A+Y R+ + +K W  ++    + A    + T    D   + +LL   +AF
Sbjct: 72  LSIYLSFRNNAAYDRWWEARKLWGTLVFEIRNLAR---ATTSLIPDPAEQRALLMEALAF 128

Query: 225 PVALKGHVICDSDVSGDLQDLLDADD---LAIVLDSKHRPRCIIEFISQSLQLLNLEATK 281
              L+G  +  +D   D +  +DA           +    R +    +   +  +++   
Sbjct: 129 CHFLRGQ-LRKTDSIKDARAFIDAQAETVAGFANPADEMVRRMGRRANAQRRAGDVDPIG 187

Query: 282 QNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPA 341
             +L+ +++        CE++ G P+P +YT L  R   +  L LPI L     W     
Sbjct: 188 FRILDERLASITAIQAGCERIAGTPLPFAYTLLVHRTAYIVCLLLPIGLISTTGWATPLF 247

Query: 342 TFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIA 384
           T + A + F ++ +   +E+PF      LALD LC + + ++ EA+ 
Sbjct: 248 TALIAYTFFGLDALSEELEDPFGTEANDLALDGLCRVCEISVFEALG 294

Rhizobium loti (strain MAFF303099) (taxid: 266835)

>sp|P76146|YNEE_ECOLI UPF0187 protein YneE OS=Escherichia coli (strain K12) GN=yneE PE=3 SV=2

 Score = 63.2 bits (152), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 44/305 (14%)

Query: 106 LLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPAL 165
           +LS +SSR++L+ +     F++  + +  + + L           ++ +  P+ +   A+
Sbjct: 20  VLSKISSRLLLNFL-----FSIAVIFMLPWYTHLG----------IKFTLAPFSILGVAI 64

Query: 166 ALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFP 225
           A+ L FR  A Y+R+V+ +K W Q++  +      V +   +S          R  +AF 
Sbjct: 65  AIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSAS---VREFARLQIAFA 121

Query: 226 VALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNM- 284
             L+   +     +  L   L  +DL  VL S      I+  + + L +        ++ 
Sbjct: 122 HCLR-MTLRKQPQAEVLAHYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDIL 180

Query: 285 ---LESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW----- 336
              L  +++     +  CE++   PIP +YT +  R + L+ + LP  L  D H+     
Sbjct: 181 FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI 240

Query: 337 -IVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKVIQA 391
            +++  TFI   SL C+ E    +E+PF      L LD +CN ++ ++      Q   +A
Sbjct: 241 SVLISYTFI---SLDCLAEE---LEDPFGTENNDLPLDAICNAIEIDL-----LQMNDEA 289

Query: 392 QVSAK 396
           ++ AK
Sbjct: 290 EIPAK 294

Escherichia coli (strain K12) (taxid: 83333)

>sp|Q8ZPI0|YNEE_SALTY UPF0187 protein YneE OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yneE PE=3 SV=2

 Score = 62.0 bits (149), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 111/249 (44%), Gaps = 12/249 (4%)

Query: 157 PYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDS 216
           P+ +   A+A+ L FR  A Y+R+V+ +  W Q++  +      V        DE   + 
Sbjct: 56  PFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREV---KTTLPDERGIED 112

Query: 217 LLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLN 276
            +R  +AF   L+   +     +  L + LD + L  V+ S      I+  + + L +  
Sbjct: 113 FVRLQIAFAHCLR-MTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAIRR 171

Query: 277 LEATKQNML----ESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWD 332
                 ++L     ++++     +  CE++   P+P +YT +  R + L+ + LP  L  
Sbjct: 172 RSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALVV 231

Query: 333 DCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKV 388
           D H++    + + + +   ++ +   +E+PF      L LD +CN ++ ++ +    + +
Sbjct: 232 DLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDI 291

Query: 389 IQAQVSAKR 397
              ++  KR
Sbjct: 292 PAKRIPDKR 300

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

>sp|Q8Z706|YNEE_SALTI UPF0187 protein YneE OS=Salmonella typhi GN=yneE PE=3 SV=2

 Score = 62.0 bits (149), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 111/249 (44%), Gaps = 12/249 (4%)

Query: 157 PYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDS 216
           P+ +   A+A+ L FR  A Y+R+V+ +  W Q++  +      V        DE   + 
Sbjct: 56  PFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREV---KTTLPDERGIED 112

Query: 217 LLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLN 276
            +R  +AF   L+   +     +  L + LD + L  V+ S      I+  + + L +  
Sbjct: 113 FVRLQIAFAHCLR-MTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAIRR 171

Query: 277 LEATKQNML----ESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWD 332
                 ++L     ++++     +  CE++   P+P +YT +  R + L+ + LP  L  
Sbjct: 172 RSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALVV 231

Query: 333 DCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKV 388
           D H++    + + + +   ++ +   +E+PF      L LD +CN ++ ++ +    + +
Sbjct: 232 DLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDI 291

Query: 389 IQAQVSAKR 397
              ++  KR
Sbjct: 292 PAKRIPDKR 300

Salmonella typhi (taxid: 90370)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
255541568	417	conserved hypothetical protein [Ricinus	0.956	0.944	0.749	1e-163
225454194	419	PREDICTED: UPF0187 protein At3g61320, ch	0.968	0.952	0.724	1e-160
224127656	348	predicted protein [Populus trichocarpa]	0.844	1.0	0.804	1e-152
22331898	410	Bestrophin-like protein [Arabidopsis tha	0.956	0.960	0.695	1e-146
6850899	406	putative protein [Arabidopsis thaliana]	0.956	0.970	0.695	1e-146
297745270	339	unnamed protein product [Vitis vinifera]	0.805	0.979	0.786	1e-146
297817446	410	hypothetical protein ARALYDRAFT_907660 [	0.956	0.960	0.692	1e-145
110741398	354	hypothetical protein [Arabidopsis thalia	0.842	0.980	0.747	1e-144
297824643	411	hypothetical protein ARALYDRAFT_483727 [	0.961	0.963	0.653	1e-139
15225904	410	Bestrophin-like protein [Arabidopsis tha	0.917	0.921	0.664	1e-138

>gi|255541568|ref|XP_002511848.1| conserved hypothetical protein [Ricinus communis] gi|223549028|gb|EEF50517.1| conserved hypothetical protein [Ricinus communis]

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 302/403 (74%), Positives = 347/403 (86%), Gaps = 9/403 (2%)

Query: 14  SHFIPKTLLKLQPSITTLTFPSKSPN----PLTFKTLSCLESQSQSETKTLTLISVLRAI 69
           S+F PK LL L  +    TFPSK PN     L+ KTL      +  +T TLTLIS+LRAI
Sbjct: 20  SNFTPKILLTLHLT----TFPSK-PNRKKSNLSLKTLCSKPPPNPHKTLTLTLISLLRAI 74

Query: 70  PDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVA 129
           PDW+DR+KERG++QKRTLY+H KWVEHRSSLRH+RHLLSSL SRVILSLIPPVIAFT VA
Sbjct: 75  PDWSDRIKERGMQQKRTLYNHNKWVEHRSSLRHLRHLLSSLQSRVILSLIPPVIAFTSVA 134

Query: 130 VVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQ 189
           V+IASYNSA++ H  PGF PVLRASSLPYQLTAPALALLLVFRTEASYSR+ +G+KAWT+
Sbjct: 135 VIIASYNSAVEMHFFPGFFPVLRASSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWTK 194

Query: 190 IIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDAD 249
           +I+G NDFA  VI+  DNS D  +K++LL+Y++AFPVALK HVI  SD++ DL++LL+ D
Sbjct: 195 VISGVNDFARQVIATVDNSKDAVLKNALLQYVIAFPVALKCHVIYGSDINRDLRNLLEVD 254

Query: 250 DLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPL 309
           DLA++L+S+HRPRCIIEFISQSLQLLNLE +K+++LESKISC HEGIGVCEQLMGIPIPL
Sbjct: 255 DLAMLLNSRHRPRCIIEFISQSLQLLNLEESKRHLLESKISCLHEGIGVCEQLMGIPIPL 314

Query: 310 SYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALD 369
           SYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALD
Sbjct: 315 SYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALD 374

Query: 370 ELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGWPNS 412
           ELCNLV SNIQEAIAT+K IQ Q+ AKRK H+ +H  NGWPNS
Sbjct: 375 ELCNLVNSNIQEAIATEKAIQNQLIAKRKRHACEHSTNGWPNS 417

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454194|ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis vinifera]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 292/403 (72%), Positives = 341/403 (84%), Gaps = 4/403 (0%)

Query: 13  PSHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQSQSE---TKTLTLISVLRAI 69
           P++  P + LK  P+   L  PSK P  L+F+  S   + S      T+ LTLIS+LR +
Sbjct: 11  PTNLAPYSSLKTIPNFHFLPLPSK-PTKLSFRVFSSRSADSPPPPSSTQNLTLISILRTV 69

Query: 70  PDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVA 129
           PDWAD +KERG++QKR+LY+HE WVEHRSS RHVRHLLSS SSRVILSLIPPVIAFT VA
Sbjct: 70  PDWADAIKERGMQQKRSLYNHETWVEHRSSRRHVRHLLSSFSSRVILSLIPPVIAFTSVA 129

Query: 130 VVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQ 189
           V++ASYNSA+  H LP F P+LRASSLPYQLTAPALALLLVFRTEASYSRF +G+KAWT+
Sbjct: 130 VIVASYNSAVTFHWLPEFFPLLRASSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTK 189

Query: 190 IIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDAD 249
           IIAGTNDFA  V++G ++S D  +K +LL+YIMAFPVALK HVI  SD+  DLQ+LL+ D
Sbjct: 190 IIAGTNDFARQVVAGVESSGDALLKKALLQYIMAFPVALKCHVIYGSDIRQDLQNLLEVD 249

Query: 250 DLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPL 309
           DLA+VL SKHRPRCIIEFISQSLQLLNL+  K+++LESK+SCFHEGIGVCEQLMGIPIPL
Sbjct: 250 DLAVVLSSKHRPRCIIEFISQSLQLLNLDDAKRHVLESKLSCFHEGIGVCEQLMGIPIPL 309

Query: 310 SYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALD 369
           SYTRLTSRFLVLWHLTLPIILW+DC+WIVVPATFISAASLFCIEEVGVLIEEPFPMLALD
Sbjct: 310 SYTRLTSRFLVLWHLTLPIILWEDCNWIVVPATFISAASLFCIEEVGVLIEEPFPMLALD 369

Query: 370 ELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGWPNS 412
           ELC LV +NIQEAIA++K+IQAQ+ AKRK+H+ +H  NG P+S
Sbjct: 370 ELCKLVHNNIQEAIASEKLIQAQLIAKRKNHADEHSPNGRPSS 412

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127656|ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|222860901|gb|EEE98443.1| predicted protein [Populus trichocarpa]

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/348 (80%), Positives = 314/348 (90%)

Query: 62  LISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPP 121
           + S+LRAIPDWADRVKERG+++KR+LY+HEKWVEHRSS RHVRHLLSSLSSRV+LSL+PP
Sbjct: 1   ITSLLRAIPDWADRVKERGMRKKRSLYNHEKWVEHRSSFRHVRHLLSSLSSRVVLSLVPP 60

Query: 122 VIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFV 181
           VIAFT VAVV+ASYNSA++ H LPGF PVLR SSLPYQLTAPALALLLVFRTEASYSRF 
Sbjct: 61  VIAFTSVAVVVASYNSAVEMHFLPGFFPVLRTSSLPYQLTAPALALLLVFRTEASYSRFE 120

Query: 182 DGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGD 241
           DGK AWT++I+GTNDFA  VISG D S++  +K  LLRYIMAFP+ALK HV   S++  D
Sbjct: 121 DGKTAWTKVISGTNDFARQVISGVDGSSNSALKSELLRYIMAFPIALKCHVTYGSNIGQD 180

Query: 242 LQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQ 301
           LQ+LL+A DLAIVL S+HRPRCIIEFISQ LQLLNL+ + +N+LESKISCFHEGIGVCEQ
Sbjct: 181 LQNLLEAGDLAIVLKSRHRPRCIIEFISQCLQLLNLDESMRNLLESKISCFHEGIGVCEQ 240

Query: 302 LMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEE 361
           LMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVP+TFISAASLFCIEEVGVLIEE
Sbjct: 241 LMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPSTFISAASLFCIEEVGVLIEE 300

Query: 362 PFPMLALDELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGW 409
           PFPMLALDELCN+VQSNI EAIAT+K IQA++ AKRKSHS +H  NGW
Sbjct: 301 PFPMLALDELCNVVQSNIWEAIATEKEIQARLVAKRKSHSCEHSTNGW 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331898|ref|NP_191691.2| Bestrophin-like protein [Arabidopsis thaliana] gi|20141056|sp|Q9M2D2.2|YU88_ARATH RecName: Full=UPF0187 protein At3g61320, chloroplastic; Flags: Precursor gi|16604549|gb|AAL24280.1| AT3g61320/T20K12_220 [Arabidopsis thaliana] gi|23296291|gb|AAN12915.1| At3g61320/T20K12_220 [Arabidopsis thaliana] gi|332646666|gb|AEE80187.1| Bestrophin-like protein [Arabidopsis thaliana]

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/397 (69%), Positives = 325/397 (81%), Gaps = 3/397 (0%)

Query: 14  SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDW 72
           S+F  ++LL+ +  I +  F  KS N    +  S  ES  S  ET T  LI +LRA+PDW
Sbjct: 11  SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDW 69

Query: 73  ADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVI 132
           AD +KERG++QKR+LY+HEKWVEHRSSLRHVRHLLSS SSRVILSLIPPV  FT VAVVI
Sbjct: 70  ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 129

Query: 133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
           ASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW  IIA
Sbjct: 130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189

Query: 193 GTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDL 251
           GTND A  VI   D+S DE  IKD LLRYI AFPVALK HVI  SD++ DL++L++ADDL
Sbjct: 190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249

Query: 252 AIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSY 311
           +++L +KHRPRC+IEFISQS+QLL L+  K+++LESK+   HEGIGVCEQLMGIPIPLSY
Sbjct: 250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSY 309

Query: 312 TRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 371
           TRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL
Sbjct: 310 TRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 369

Query: 372 CNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
           C+LV SNIQEA+ ++KVI+ ++ AK K H ++H +NG
Sbjct: 370 CDLVHSNIQEAVKSEKVIRNRIIAKIKLHEFKHSSNG 406

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6850899|emb|CAB71062.1| putative protein [Arabidopsis thaliana]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/397 (69%), Positives = 325/397 (81%), Gaps = 3/397 (0%)

Query: 14  SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDW 72
           S+F  ++LL+ +  I +  F  KS N    +  S  ES  S  ET T  LI +LRA+PDW
Sbjct: 7   SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDW 65

Query: 73  ADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVI 132
           AD +KERG++QKR+LY+HEKWVEHRSSLRHVRHLLSS SSRVILSLIPPV  FT VAVVI
Sbjct: 66  ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 125

Query: 133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
           ASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW  IIA
Sbjct: 126 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 185

Query: 193 GTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDL 251
           GTND A  VI   D+S DE  IKD LLRYI AFPVALK HVI  SD++ DL++L++ADDL
Sbjct: 186 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 245

Query: 252 AIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSY 311
           +++L +KHRPRC+IEFISQS+QLL L+  K+++LESK+   HEGIGVCEQLMGIPIPLSY
Sbjct: 246 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSY 305

Query: 312 TRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 371
           TRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL
Sbjct: 306 TRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 365

Query: 372 CNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
           C+LV SNIQEA+ ++KVI+ ++ AK K H ++H +NG
Sbjct: 366 CDLVHSNIQEAVKSEKVIRNRIIAKIKLHEFKHSSNG 402

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745270|emb|CBI40350.3| unnamed protein product [Vitis vinifera]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/332 (78%), Positives = 299/332 (90%)

Query: 81  VKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALD 140
           ++QKR+LY+HE WVEHRSS RHVRHLLSS SSRVILSLIPPVIAFT VAV++ASYNSA+ 
Sbjct: 1   MQQKRSLYNHETWVEHRSSRRHVRHLLSSFSSRVILSLIPPVIAFTSVAVIVASYNSAVT 60

Query: 141 SHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATM 200
            H LP F P+LRASSLPYQLTAPALALLLVFRTEASYSRF +G+KAWT+IIAGTNDFA  
Sbjct: 61  FHWLPEFFPLLRASSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKIIAGTNDFARQ 120

Query: 201 VISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHR 260
           V++G ++S D  +K +LL+YIMAFPVALK HVI  SD+  DLQ+LL+ DDLA+VL SKHR
Sbjct: 121 VVAGVESSGDALLKKALLQYIMAFPVALKCHVIYGSDIRQDLQNLLEVDDLAVVLSSKHR 180

Query: 261 PRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLV 320
           PRCIIEFISQSLQLLNL+  K+++LESK+SCFHEGIGVCEQLMGIPIPLSYTRLTSRFLV
Sbjct: 181 PRCIIEFISQSLQLLNLDDAKRHVLESKLSCFHEGIGVCEQLMGIPIPLSYTRLTSRFLV 240

Query: 321 LWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQ 380
           LWHLTLPIILW+DC+WIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELC LV +NIQ
Sbjct: 241 LWHLTLPIILWEDCNWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCKLVHNNIQ 300

Query: 381 EAIATQKVIQAQVSAKRKSHSYQHCANGWPNS 412
           EAIA++K+IQAQ+ AKRK+H+ +H  NG P+S
Sbjct: 301 EAIASEKLIQAQLIAKRKNHADEHSPNGRPSS 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817446|ref|XP_002876606.1| hypothetical protein ARALYDRAFT_907660 [Arabidopsis lyrata subsp. lyrata] gi|297322444|gb|EFH52865.1| hypothetical protein ARALYDRAFT_907660 [Arabidopsis lyrata subsp. lyrata]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/397 (69%), Positives = 323/397 (81%), Gaps = 3/397 (0%)

Query: 14  SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLES-QSQSETKTLTLISVLRAIPDW 72
           S+F  ++LL+ +  I +  F  KS N    +  S  ES  S  ET T  LI +LRA+PDW
Sbjct: 11  SNFAHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESGDSGHETLTEKLILLLRAVPDW 69

Query: 73  ADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVI 132
           AD +KERG++QKR+LY+HEKWVEHRSSLRHVRHLLSS SSRVILSLIPPV  FT VAVVI
Sbjct: 70  ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 129

Query: 133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
           ASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW  IIA
Sbjct: 130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189

Query: 193 GTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDL 251
           GTND A  VI   D+S DE  IKD LLRYI AFPVALK HVI  SD++ DL++L++ADDL
Sbjct: 190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249

Query: 252 AIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSY 311
           +++L +KHRPRC+IEFISQS+QLL L+  K+++LESK+   HEGIGVCEQLMGIPIPLSY
Sbjct: 250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSY 309

Query: 312 TRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 371
           TRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL
Sbjct: 310 TRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 369

Query: 372 CNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
           C+LV SNIQEA  ++KVI+ ++ AK K   ++H +NG
Sbjct: 370 CDLVHSNIQEAAKSEKVIRNRIIAKIKLREFKHSSNG 406

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110741398|dbj|BAF02248.1| hypothetical protein [Arabidopsis thaliana]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/348 (74%), Positives = 302/348 (86%), Gaps = 1/348 (0%)

Query: 62  LISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPP 121
           LI +LRA+PDWAD +KERG++QKR+LY+HEKWVEHRSSLRHVRHLLSS SSRVILSLIPP
Sbjct: 3   LIHLLRAVPDWADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPP 62

Query: 122 VIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFV 181
           V  FT VAVVIASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ 
Sbjct: 63  VFFFTSVAVVIASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYE 122

Query: 182 DGKKAWTQIIAGTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSG 240
           +G+KAW  IIAGTND A  VI   D+S DE  IKD LLRYI AFPVALK HVI  SD++ 
Sbjct: 123 EGRKAWVGIIAGTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIAR 182

Query: 241 DLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCE 300
           DL++L++ADDL+++L +KHRPRC+IEFISQS+QLL L+  K+++LESK+   HEGIGVCE
Sbjct: 183 DLRNLIEADDLSLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCE 242

Query: 301 QLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIE 360
           QLMGIPIPLSYTRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIE
Sbjct: 243 QLMGIPIPLSYTRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIE 302

Query: 361 EPFPMLALDELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
           EPFPMLALDELC+LV SNIQEA+ ++KVI+ ++ AK K H ++H +NG
Sbjct: 303 EPFPMLALDELCDLVHSNIQEAVKSEKVIRNRIIAKIKLHEFKHSSNG 350

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824643|ref|XP_002880204.1| hypothetical protein ARALYDRAFT_483727 [Arabidopsis lyrata subsp. lyrata] gi|297326043|gb|EFH56463.1| hypothetical protein ARALYDRAFT_483727 [Arabidopsis lyrata subsp. lyrata]

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/404 (65%), Positives = 324/404 (80%), Gaps = 8/404 (1%)

Query: 14  SHFIPKTLLKLQPSITTLTFPSKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIP 70
           S+F  ++ LK  P + +    +++P  L FK   SCL S S+S+   L+  LIS+L+A+P
Sbjct: 11  SNFTNRSFLK--PRLCS-GISARAPKSLHFKFNPSCLSSGSKSDDSPLSEKLISLLKAVP 67

Query: 71  DWADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAV 130
           +W+D +KER ++QKR+LY+HE WV HRSSLRH+RH+ SS SSRVILSLIPPV  FT VA 
Sbjct: 68  NWSDGIKERRMEQKRSLYTHENWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAF 127

Query: 131 VIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQI 190
           +IA YNSA+D   LP F PVLRAS LPYQLTAPALALLLVFRTEASYSRF  G+KAW +I
Sbjct: 128 LIAGYNSAVDLDWLPDFFPVLRASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKI 187

Query: 191 IAGTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALK-GHVICDSDVSGDLQDLLDA 248
           I+GTND A +VIS    S DE  I+D+LLRYI+AFPVALK  HVI  SD++ DLQ++++A
Sbjct: 188 ISGTNDLARLVISSVHGSGDELVIRDALLRYIVAFPVALKVCHVIYGSDIATDLQNVIEA 247

Query: 249 DDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIP 308
           DDL+++L SKHRPRC+I+FISQSLQLLNL++TK +MLESK+    EGIGVCEQLMGIPIP
Sbjct: 248 DDLSLILQSKHRPRCVIQFISQSLQLLNLDSTKIDMLESKMMQLQEGIGVCEQLMGIPIP 307

Query: 309 LSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLAL 368
           LSYTRLTSRFLVLWHLTLP+ILWDDCHW VVPATFISAASLFCIEEVGVLIEEPF MLAL
Sbjct: 308 LSYTRLTSRFLVLWHLTLPVILWDDCHWNVVPATFISAASLFCIEEVGVLIEEPFSMLAL 367

Query: 369 DELCNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANGWPNS 412
           DELC +V SN  EA+ +++VI+ ++ AK++    +H +NGW  S
Sbjct: 368 DELCAMVLSNSDEAVESKEVIRNRIIAKKRIREIKHSSNGWHQS 411

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15225904|ref|NP_182111.1| Bestrophin-like protein [Arabidopsis thaliana] gi|20140947|sp|O80832.1|YU87_ARATH RecName: Full=UPF0187 protein At2g45870, chloroplastic; Flags: Precursor gi|3386607|gb|AAC28537.1| hypothetical protein [Arabidopsis thaliana] gi|18491251|gb|AAL69450.1| At2g45870/F4I18.15 [Arabidopsis thaliana] gi|330255518|gb|AEC10612.1| Bestrophin-like protein [Arabidopsis thaliana]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/382 (66%), Positives = 313/382 (81%), Gaps = 4/382 (1%)

Query: 35  SKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIPDWADRVKERGVKQKRTLYSHE 91
           +++P  L FK   SC+ S  +S+   L+  LIS+L+A+P+W+D +KER ++QKR+LY+HE
Sbjct: 29  ARAPKSLHFKFNPSCVSSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHE 88

Query: 92  KWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVL 151
            WV HRSSLRH+RH+ SS SSRVILSLIPPV  FT VA++IA YNSA+D   LP F PVL
Sbjct: 89  NWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAILIAGYNSAVDLDWLPDFFPVL 148

Query: 152 RASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE 211
           RAS LPYQLTAPALALLLVFRTEASYSRF  G+KAW +II+GTND A +VIS    S DE
Sbjct: 149 RASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDE 208

Query: 212 -CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQ 270
             I+D+LLRYI+AFPVALK HVI  SD++ DL+++++ DDL+++L SKHRPRC+I+FISQ
Sbjct: 209 LIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQFISQ 268

Query: 271 SLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIIL 330
           SLQLLNL++TK +MLE+K+    EGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLP+IL
Sbjct: 269 SLQLLNLDSTKIDMLETKMMQLQEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPVIL 328

Query: 331 WDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQ 390
           WDDCHW VVPATFISAASLFCIEEVGVLIEEPF MLALDELC +V SN  EA+ +++VI+
Sbjct: 329 WDDCHWNVVPATFISAASLFCIEEVGVLIEEPFSMLALDELCAMVLSNSDEAVESKEVIR 388

Query: 391 AQVSAKRKSHSYQHCANGWPNS 412
            ++ AK++    +H +NGW  S
Sbjct: 389 NRIIAKKRILEIKHSSNGWHKS 410

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
TAIR|locus:2098881	410	AT3G61320 "AT3G61320" [Arabido	0.956	0.960	0.619	3.6e-121
TAIR|locus:2050740	410	AT2G45870 "AT2G45870" [Arabido	0.917	0.921	0.599	2.7e-116
UNIPROTKB|Q4KAA3	299	PFL_3728 "Uncharacterized prot	0.626	0.862	0.215	1.4e-09
UNIPROTKB|Q602K6	277	MCA3057 "Putative uncharacteri	0.308	0.458	0.248	2e-09
UNIPROTKB|Q887D1	314	PSPTO_1371 "Conserved effector	0.553	0.726	0.202	2.2e-09
UNIPROTKB|Q87U13	295	PSPTO_5502 "Uncharacterized pr	0.550	0.769	0.217	3.9e-09
ASPGD|ASPL0000042484	499	BEST1 [Emericella nidulans (ta	0.283	0.234	0.238	8.1e-09
ASPGD|ASPL0000000571	390	BEST2 [Emericella nidulans (ta	0.325	0.343	0.217	3e-08
UNIPROTKB|Q4KBN5	299	yneE "Swarming motility protei	0.614	0.846	0.201	1.7e-07
UNIPROTKB|P76146	304	yneE "conserved inner membrane	0.182	0.246	0.318	4.1e-07

TAIR|locus:2098881 AT3G61320 "AT3G61320" [Arabidopsis thaliana (taxid:3702)]

 Score = 1192 (424.7 bits), Expect = 3.6e-121, P = 3.6e-121
 Identities = 246/397 (61%), Positives = 288/397 (72%)

Query:    14 SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDW 72
             S+F  ++LL+ +  I +  F  KS N    +  S  ES  S  ET T  LI +LRA+PDW
Sbjct:    11 SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDW 69

Query:    73 ADRVKERGVKQKRTLYSHEKWVEHXXXXXXXXXXXXXXXXXXXXXXXPPVIAFTMVAVVI 132
             AD +KERG++QKR+LY+HEKWVEH                       PPV  FT VAVVI
Sbjct:    70 ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 129

Query:   133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
             ASYNSA+    LPG  P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW  IIA
Sbjct:   130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189

Query:   193 GTNDFATMVISGTDNSTDECI-KDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXX 251
             GTND A  VI   D+S DE I KD LLRYI AFPVALK HVI  SD++            
Sbjct:   190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249

Query:   252 XXXXXSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSY 311
                  +KHRPRC+IEFISQS+QLL L+  K+++LESK+   HEGIGVCEQLMGIPIPLSY
Sbjct:   250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSY 309

Query:   312 TRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 371
             TRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL
Sbjct:   310 TRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 369

Query:   372 CNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
             C+LV SNIQEA+ ++KVI+ ++ AK K H ++H +NG
Sbjct:   370 CDLVHSNIQEAVKSEKVIRNRIIAKIKLHEFKHSSNG 406

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2050740 AT2G45870 "AT2G45870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 229/382 (59%), Positives = 278/382 (72%)

Query:    35 SKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIPDWADRVKERGVKQKRTLYSHE 91
             +++P  L FK   SC+ S  +S+   L+  LIS+L+A+P+W+D +KER ++QKR+LY+HE
Sbjct:    29 ARAPKSLHFKFNPSCVSSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHE 88

Query:    92 KWVEHXXXXXXXXXXXXXXXXXXXXXXXPPVIAFTMVAVVIASYNSALDSHLLPGFLPVL 151
              WV H                       PPV  FT VA++IA YNSA+D   LP F PVL
Sbjct:    89 NWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAILIAGYNSAVDLDWLPDFFPVL 148

Query:   152 RASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE 211
             RAS LPYQLTAPALALLLVFRTEASYSRF  G+KAW +II+GTND A +VIS    S DE
Sbjct:   149 RASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDE 208

Query:   212 CI-KDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXXXXXXXSKHRPRCIIEFISQ 270
              I +D+LLRYI+AFPVALK HVI  SD++                 SKHRPRC+I+FISQ
Sbjct:   209 LIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQFISQ 268

Query:   271 SLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIIL 330
             SLQLLNL++TK +MLE+K+    EGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLP+IL
Sbjct:   269 SLQLLNLDSTKIDMLETKMMQLQEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPVIL 328

Query:   331 WDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQ 390
             WDDCHW VVPATFISAASLFCIEEVGVLIEEPF MLALDELC +V SN  EA+ +++VI+
Sbjct:   329 WDDCHWNVVPATFISAASLFCIEEVGVLIEEPFSMLALDELCAMVLSNSDEAVESKEVIR 388

Query:   391 AQVSAKRKSHSYQHCANGWPNS 412
              ++ AK++    +H +NGW  S
Sbjct:   389 NRIIAKKRILEIKHSSNGWHKS 410

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009909 "regulation of flower development" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

UNIPROTKB|Q4KAA3 PFL_3728 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 58/269 (21%), Positives = 110/269 (40%)

Query:   123 IAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVD 182
             IA   + V + +    L   L P +   + A+  P+ L   +L++ + FR  A Y R+ +
Sbjct:    24 IALRSLLVTLLASAIVLIETLHPAYFSKVNAT--PFTLLGLSLSIFMSFRNNACYDRWYE 81

Query:   183 GKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGXX 242
              +KA   ++         +I  T    D   + ++LR +  F  ALK  +  + ++S   
Sbjct:    82 ARKALGTVVTEVRS----MIRETQVLEDTRARSAILRDLCGFAHALKARLRREDELSAAE 137

Query:   243 XXXXXXXXXXXXXXSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQL 302
                                R I    S   Q   L   +  +L ++++        CE++
Sbjct:   138 TWLSQLPPASTSNLPDSLLRQIARQCSDQAQAGRLSEWRYLLLANQLAAITGAQSTCERI 197

Query:   303 MGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEP 362
                P+P  YT L  R   ++ + LP  + +   W+    T I + + F ++ +G  +E+P
Sbjct:   198 KATPLPFPYTLLLHRTSYMFCILLPFAMAEPLGWLTPIFTAIVSYTFFGLDAIGDELEDP 257

Query:   363 FPM----LALDELCNLVQSNIQEAI-ATQ 386
             F      L L  +   ++  I EA+ AT+
Sbjct:   258 FGHDENDLPLSAIVRNIEREILEALGATE 286

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q602K6 MCA3057 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 115 (45.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
 Identities = 34/137 (24%), Positives = 65/137 (47%)

Query:   257 SKHRP-RCIIEFISQSLQLLN---LEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYT 312
             ++HRP R   +  +++ +L +   L   +   L   +S F E  G CE++   PIP SY+
Sbjct:   136 AEHRPNRIAAQLFAETARLRDRGDLSGDQLLCLNPDLSAFAEVCGGCERIQKTPIPYSYS 195

Query:   313 RLTSRFLVLWHLTLPIILWDDCH-WIVVPATFISAASLFCIEEVGVLIEEPFPM----LA 367
                 +F+ L+ +++P     + H W  +  T +    L  +E +   IE PF      L 
Sbjct:   196 LFLKKFIFLYIVSMPFCFVPEFHYWTALITTLVFYV-LASLELIAEEIENPFGEDANDLP 254

Query:   368 LDELCNLVQSNIQEAIA 384
              D++   ++  ++E +A
Sbjct:   255 TDDIAASIRLRVRELLA 271

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q887D1 PSPTO_1371 "Conserved effector locus protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 162 (62.1 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 49/242 (20%), Positives = 102/242 (42%)

Query:   156 LPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDEC--- 212
             +P  L   AL +L+ FR  ++Y+R+ + +  W  ++  +  F   V++  D   D+    
Sbjct:    50 MPLTLLCSALIVLISFRNSSAYNRWWEARTLWGAMVNTSRSFGRQVLTLIDGERDDLNNP 109

Query:   213 IKDSLLRYIMAFPVALKGHVICDSDV-SGXXXXXXXXXXXXXXXXSKHRPRCIIE----F 267
             +K  L +  +A+  AL+ H+    DV +                 S + P  I+      
Sbjct:   110 VKAILFQRHVAYLRALRAHL--KGDVKTAKLDGLLSPDEIQRASQSNNFPNDILNGSAAV 167

Query:   268 ISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLP 327
             ISQ+      ++ +   LES +       G  E++   P+P  Y      F  L+ + +P
Sbjct:   168 ISQAFAAGQFDSIRLTRLESTMVDLSNCQGGMERIANTPLPYPYVYFPRLFSTLFCILMP 227

Query:   328 IILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFP----MLALDELCNLVQSNIQEAI 383
             + +     W     + +    L  ++ +G  ++ PF      + +++LCN ++ N+Q   
Sbjct:   228 LSMVTTLGWFTPAISTVVGCMLLAMDRIGTDLQAPFGNSQHRIRMEDLCNTIEKNLQSMF 287

Query:   384 AT 385
             ++
Sbjct:   288 SS 289

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q87U13 PSPTO_5502 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 159 (61.0 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 52/239 (21%), Positives = 102/239 (42%)

Query:   155 SLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVIS--GTDNSTDEC 212
             SLP  L   AL +L  FR  ++Y+R+ + +  W  ++  +  FA  V++    DN  +  
Sbjct:    49 SLPLTLLGSALVVLTSFRNSSAYNRWWEARTLWGAMVNSSRSFARQVLTLVEDDNGINP- 107

Query:   213 IKDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXXXXXXXSKHRPRCIIE----FI 268
             +K  LLR  +A+   L  H +   +                   + + P  ++      +
Sbjct:   108 VKAILLRRHVAYVKCLSAH-LKGVEPGDEIQMLIPREEFERRRDTNNFPNDLLNTSAALL 166

Query:   269 SQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPI 328
             ++  Q   L++ +   LES +       G  E++   P+P  Y      F+ L+ L +PI
Sbjct:   167 AKEYQAGRLDSIRLARLESTMVDLSNCQGGMERIANTPLPYPYVAFPRLFITLFCLIVPI 226

Query:   329 ILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFP----MLALDELCNLVQSNIQEAI 383
              L +   W    A+ +    L  IE++G  ++ PF     ++ ++ LC  ++ N+   +
Sbjct:   227 GLVETLGWFTPLASTVVGFMLLAIEKIGTDLQSPFRASEHVIQMNALCENIERNLDSML 285

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000042484 BEST1 [Emericella nidulans (taxid:162425)]

 Score = 112 (44.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
 Identities = 30/126 (23%), Positives = 63/126 (50%)

Query:   259 HRPRCIIEFISQSLQ-LLNLEATKQNMLESK-ISCF---HEGIGVCEQLMGIPIPLSYTR 313
             H P  I+  +S  +  ++  E    ++ +S+ I+C    +E +   E+++  P+P++Y+ 
Sbjct:   292 HLPLEILNHLSAYIDSVIRNETLNISLHQSQAIACLAQLNEVVTGTERVLDTPLPVAYSI 351

Query:   314 LTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALD 369
               ++   ++ L LP  L+D   W+ +P + ++A  +  +  +G  IE PF      L LD
Sbjct:   352 AIAQIAWIYVLVLPFQLYDSLGWVTIPGSIVAAYIILGLATIGSEIENPFGHDVNDLPLD 411

Query:   370 ELCNLV 375
               C  +
Sbjct:   412 TYCRQI 417

GO:0006820 "anion transport" evidence=IDA

GO:0008509 "anion transmembrane transporter activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005253 "anion channel activity" evidence=IDA

ASPGD|ASPL0000000571 BEST2 [Emericella nidulans (taxid:162425)]

 Score = 116 (45.9 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
 Identities = 30/138 (21%), Positives = 64/138 (46%)

Query:   267 FISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTL 326
             FI + ++     A   + ++++++   +  G  E +   PIP+++     + L L+   L
Sbjct:   223 FIKRGVERGWFNAPGASQMQAQLNVLMDAFGKMETIKLTPIPVAHLIHQKQVLALYGCVL 282

Query:   327 PIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEA 382
             P  + DD  W  +P   +   +L+ IE +G  +E+PF      + +D L    +  I+  
Sbjct:   283 PFAMVDDMGWWTIPIVSLVIFTLYGIEGIGSQLEDPFGYDRNDIKMDALVGDARMEIEAV 342

Query:   383 IATQKVIQAQVSAKRKSH 400
             +   + + A V  +R S+
Sbjct:   343 LEEWRRVMAVVERERASY 360

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005253 "anion channel activity" evidence=ISA

UNIPROTKB|Q4KBN5 yneE "Swarming motility protein YneE" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 53/263 (20%), Positives = 109/263 (41%)

Query:   123 IAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVD 182
             IA   V V + +    L   L P +   + A+  P+ L   +L++ + FR  A Y R+ +
Sbjct:    24 IALRCVLVTLLASVIVLVETLQPSYFSKVNAT--PFTLLGLSLSIFMSFRNNACYDRWWE 81

Query:   183 GKKAWTQIIAGTNDFA--TMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSG 240
             G+K   Q+I         +++I G         ++ +LR +  F  +L   +  + + + 
Sbjct:    82 GRKQLGQLIIEVRSLIRESLIIDGHPE------REGMLRDLCGFAHSLIARLRHEDEAAA 135

Query:   241 XXXXXXXXXXXXXXXXSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCE 300
                             +  + + I +  SQ  Q   +   +   LE+++         CE
Sbjct:   136 LRPWAQASLDPGHPNLTDAQLQRIGQRCSQWAQQGLISEWRYTQLETRLVSLSLVQAACE 195

Query:   301 QLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIE 360
             ++   P+P  YT L  R + L+ + LP  + +   W+    T I + +   ++E+G  +E
Sbjct:   196 RIQNTPLPFPYTLLLHRTIYLFCILLPFAMAEPLGWLTPIFTAIVSYTFLGLDEIGDDLE 255

Query:   361 EPFPMLALDELCNLVQSNIQEAI 383
             +PF     D  C+ +   ++  +
Sbjct:   256 DPFGYDDNDLPCSALLRGLEREV 278

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P76146 yneE "conserved inner membrane protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 100 (40.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
 Identities = 29/91 (31%), Positives = 48/91 (52%)

Query:   299 CEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW------IVVPATFISAASLFCI 352
             CE++   PIP +YT +  R + L+ + LP  L  D H+      +++  TFIS   L C+
Sbjct:   198 CERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFISVLISYTFIS---LDCL 254

Query:   353 EEVGVLIEEPFPM----LALDELCNLVQSNI 379
              E    +E+PF      L LD +CN ++ ++
Sbjct:   255 AEE---LEDPFGTENNDLPLDAICNAIEIDL 282

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006928 "cellular component movement" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M2D2	YU88_ARATH	No assigned EC number	0.6952	0.9563	0.9609	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026838001 SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (419 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	412
pfam01062	284	pfam01062, Bestrophin, Bestrophin, RFP-TM, chlorid	3e-60
COG3781	306	COG3781, COG3781, Predicted membrane protein [Func	1e-31

>gnl|CDD|216274 pfam01062, Bestrophin, Bestrophin, RFP-TM, chloride channel

 Score =  196 bits (502), Expect = 3e-60
 Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 19/289 (6%)

Query: 101 RHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQL 160
            +   LL      ++ S+ P ++ F +++ ++ +         +   L        P+ L
Sbjct: 7   PNFFRLLFRWRGSILKSIWPELLVFLLLSALVTAIY-------IFELLAKYCLPIAPFTL 59

Query: 161 TAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRY 220
              AL+  L FR  A+Y R+ + +K W  ++  +   A  V +      +   +  LLR 
Sbjct: 60  IGLALSFFLGFRNNAAYDRWWEARKLWGALVNWSRSLARQVSTLIPGDDE---RRRLLRR 116

Query: 221 IMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLL----N 276
            +A+  AL+   +     + DL+ LL  ++   +L S + P  ++   + SL        
Sbjct: 117 TIAYAHALRAL-LRGISPAVDLEHLLSEEEEEKLLQSSNPPYALLIVWAASLAKARREGR 175

Query: 277 LEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW 336
           ++  +   L+ +++   + +G CE++   PIPL+YT+L  R + L+ L LP  L D   W
Sbjct: 176 IDDIQLVQLDEELNELRDALGGCERIDWTPIPLAYTQLVHRAVYLYCLLLPFGLQDTLGW 235

Query: 337 IVVPATFISAASLFCIEEVGVLIEEPF----PMLALDELCNLVQSNIQE 381
                T +     F +++VG  +E PF      L L+ LC  ++ N+ E
Sbjct: 236 FTPLFTVLIFYFFFGLDKVGEELENPFGEDDNDLPLNALCRTIERNLLE 284

Bestrophin is a 68-kDa basolateral plasma membrane protein expressed in retinal pigment epithelial cells (RPE). It is encoded by the VMD2 gene, which is mutated in Best macular dystrophy, a disease characterized by a depressed light peak in the electrooculogram. VMD2 encodes a 585-amino acid protein with an approximate mass of 68 kDa which has been designated bestrophin. Bestrophin shares homology with the Caenorhabditis elegans RFP gene family, named for the presence of a conserved arginine (R), phenylalanine (F), proline (P), amino acid sequence motif. Bestrophin is a plasma membrane protein, localised to the basolateral surface of RPE cells consistent with a role for bestrophin in the generation or regulation of the EOG light peak. Bestrophin and other RFP family members represent a new class of chloride channels, indicating a direct role for bestrophin in generating the light peak. The VMD2 gene underlying Best disease was shown to represent the first human member of the RFP-TM protein family. More than 97% of the disease-causing mutations are located in the N-terminal RFP-TM domain implying important functional properties. The bestrophins are four-pass transmembrane chloride-channel proteins, and the RFP-TM or bestrophin domain extends from the N-terminus through approximately 350 amino acids and contains all of the TM domains as well as nearly all reported disease causing mutations. Interestingly, the RFP motif is not conserved evolutionarily back beyond Metazoa, neither is it in plant members. Length = 284

>gnl|CDD|226304 COG3781, COG3781, Predicted membrane protein [Function unknown]

 Score =  122 bits (307), Expect = 1e-31
 Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 16/278 (5%)

Query: 114 VILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRT 173
           V+  ++P ++   + ++V+    +A+     P  +P       P+ +   ALA+ L FR 
Sbjct: 20  VLPKILPRLLLCFLFSLVV----TAVLPWYTPLSIPFTLT---PFSIPGIALAIFLGFRN 72

Query: 174 EASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVI 233
            A+Y R+ + +K W Q++    + A  + +    + D       LR ++AF  AL+   +
Sbjct: 73  NAAYDRYWEARKLWGQLVNAIRNLARQIWTLVPETLDSADVREFLRLLVAFAHALRLQ-L 131

Query: 234 CDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLL----NLEATKQNMLESKI 289
                + DL  LL   D   VL S + P  I  ++ + LQ       L+A +   L+ ++
Sbjct: 132 RKQPQNEDLAALLPTSDYEKVLASNNPPLEIALWMGEWLQQQRRNGQLDAIQFTSLDRRL 191

Query: 290 SCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASL 349
           +     +G CE++   PIP +YT    R + L+   LP  L +   W     + + A + 
Sbjct: 192 NSISAVLGGCERIAYTPIPFAYTLHLHRTVYLFCFLLPFGLVETLGWATPFFSVLIAYTF 251

Query: 350 FCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAI 383
           F +E +   IE+PF      L LD +CN ++ N+ + I
Sbjct: 252 FGLEAIAEEIEDPFGTEANDLPLDAICNTIEINLLDLI 289

Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	412
COG3781	306	Predicted membrane protein [Function unknown]	100.0
PF01062	293	Bestrophin: Bestrophin, RFP-TM, chloride channel;	100.0
KOG3547	450	consensus Bestrophin (Best vitelliform macular dys	99.85
PF14023	209	DUF4239: Protein of unknown function (DUF4239)	97.31

>COG3781 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=9.7e-74  Score=541.16  Aligned_cols=280  Identities=25%  Similarity=0.426  Sum_probs=261.1

Q ss_pred             hhHHHHHHhcchhhHhhhHHHHHHHHHHHHHHHHHhhhhhccCCCCcccccccCCchhhhhhhHHHHHHHhcchhHHHHH
Q 015152          101 RHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRF  180 (412)
Q Consensus       101 R~~~~ll~~~~gsV~~~i~~~vl~~~~~a~~V~~l~~~~~~~~~p~~~p~l~~~~~p~sllg~aLsLLLvFRtNsaY~Rw  180 (412)
                      .||..+++.|+|||+++|.++++++++++++|..++...    .|.   .......||++.|++||++||||||+|||||
T Consensus         7 ~hw~r~~f~~rGSVl~~i~~rll~~~~fS~~v~~~~~w~----~~~---~i~~~~tpf~i~giaLai~L~FRnNaaYdR~   79 (306)
T COG3781           7 QHWLRLIFVWRGSVLPKILPRLLLCFLFSLVVTAVLPWY----TPL---SIPFTLTPFSIPGIALAIFLGFRNNAAYDRY   79 (306)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhh----ccc---cceeccCcchhHHHHHHHHHhhccchHHHHH
Confidence            456679999999999999999999999999998887621    121   2345668999999999999999999999999


Q ss_pred             HHHHHHhhHHHHhHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHhcccCCCCCchhHhhhcCHhHHHHHhcCCCc
Q 015152          181 VDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHR  260 (412)
Q Consensus       181 wEaRk~WG~ivn~sR~lar~~~~~~~~~~d~~~~~~l~r~liAf~~aLk~hLR~~~~~~~eL~~lL~~~El~~l~~~~n~  260 (412)
                      |||||+||+++|.+||++|++++.++.+.|++.++++++.++||++|+|.|||++ +..+|+..+|+.+.++.+.++.|+
T Consensus        80 wEaRKlWG~lvn~~Rnl~R~i~t~v~e~~d~a~~~~~l~llvAFahalr~~LR~q-p~~~~l~a~l~~~~~~kv~a~~np  158 (306)
T COG3781          80 WEARKLWGQLVNAIRNLARQIWTLVPETLDSADVREFLRLLVAFAHALRLQLRKQ-PQNEDLAALLPTSDYEKVLASNNP  158 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHhCC-CchHHHHHhcCHHHHHHHHhccCC
Confidence            9999999999999999999999999877788999999999999999999999976 568999999999999999999999


Q ss_pred             HHHHHHHHHHHHH----cccCChhhHHHHHHHHHHHHhhhhccccccCCCCchhHHHHHHHHHHHHHHHhhhHhhhcCCc
Q 015152          261 PRCIIEFISQSLQ----LLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW  336 (412)
Q Consensus       261 P~~il~~l~~~l~----~~~l~~~~~~~m~~~l~~l~d~~G~cERI~~TPiP~sYt~h~~~fl~lylllLPf~Lv~~~gW  336 (412)
                      |+.++.+|+++++    +|.+++.+...|++.++.+++.+||||||.+||+||+|+.|+||.+++||++|||+||.++||
T Consensus       159 p~ei~~wmGe~l~~q~r~g~l~~~~~~sl~~~L~~~s~vlggCERI~~TPiPfAYtl~lhrtvyl~C~~LPF~lV~tlgw  238 (306)
T COG3781         159 PLEIALWMGEWLQQQRRNGQLDAIQFTSLDRRLNSISAVLGGCERIAYTPIPFAYTLHLHRTVYLFCFLLPFGLVETLGW  238 (306)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHHhHHHHHHHccc
Confidence            9999999998885    479999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhhCCCCC----CCHHHHHHHHHHHHHHHHhcccc
Q 015152          337 IVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKV  388 (412)
Q Consensus       337 ~tip~t~lva~~llGie~Ig~eIEePFg~----LPLd~ic~~Ie~~l~e~l~~~~~  388 (412)
                      +|+.++++|||.|+|+|+||+|||||||.    ||||+||++||+|+.+++++.+.
T Consensus       239 ~Tp~~s~lIayTffgleaia~EiEdPFGte~NDLpLD~ic~~ie~~l~dl~~e~p~  294 (306)
T COG3781         239 ATPFFSVLIAYTFFGLEAIAEEIEDPFGTEANDLPLDAICNTIEINLLDLIGEAPI  294 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCccCCCCCcCcHHHHHHHHHHHHHHHhCCCCc
Confidence            99999999999999999999999999995    99999999999999999998874

>PF01062 Bestrophin: Bestrophin, RFP-TM, chloride channel; InterPro: IPR021134 Bestrophin is a 68kDa basolateral plasma membrane protein expressed in retinal pigment epithelial cells (RPE)

Probab=100.00  E-value=2.5e-64  Score=494.08  Aligned_cols=276  Identities=30%  Similarity=0.512  Sum_probs=246.5

Q ss_pred             hhhhccchhHHHHHHhcchhhHhhhHHHHHHHHHHHHHHHHHhhhhhccCCCCcccccccCCchhhhhhhHHHHHHHhcc
Q 015152           94 VEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRT  173 (412)
Q Consensus        94 ~~hrs~~R~~~~ll~~~~gsV~~~i~~~vl~~~~~a~~V~~l~~~~~~~~~p~~~p~l~~~~~p~sllg~aLsLLLvFRt  173 (412)
                      ..||++ ++++++++.|+|||+++++++++++++++++|++++....       ...+..+..+++++|++|||+|||||
T Consensus         7 ~~~~~~-~~~~~~l~~~~gsv~~~i~~~ll~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~l~g~~l~~lL~Fr~   78 (293)
T PF01062_consen    7 QDVRTS-RSWWRLLFRWRGSVLKRIWPPLLVFLALAAAVALLYIFEP-------ICWLSLPSSPFSLLGIALSFLLVFRT   78 (293)
T ss_pred             cccCCc-ccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-------cccccccccchhHHHHHHHHHHHHHH
Confidence            446666 7777899999999999999999999999999999874221       12345667789999999999999999


Q ss_pred             hhHHHHHHHHHHHhhHHHHhHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHhcccCCCCCchhHhhhc---CHhH
Q 015152          174 EASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLL---DADD  250 (412)
Q Consensus       174 NsaY~RwwEaRk~WG~ivn~sR~lar~~~~~~~~~~d~~~~~~l~r~liAf~~aLk~hLR~~~~~~~eL~~lL---~~~E  250 (412)
                      |+||+|||||||+||.++|.+||++++++++++++   ..+++++|+++||++++|+|||++++ ..++++++   .++|
T Consensus        79 n~ay~Rwwe~r~~wg~l~~~~r~l~~~~~~~~~~~---~~~~~l~r~~ia~~~~~~~~lR~~~~-~~~~~~ll~~g~~~~  154 (293)
T PF01062_consen   79 NTAYDRWWEARKLWGNLVNWSRNLARQICAFVPDD---DERRRLLRRLIAFAVALKAHLRGEST-SEELEDLLEAGLTEE  154 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---hhHHHHHHHHHHHHHHHHHHhcCCCh-hhhhhhhhhccchHH
Confidence            99999999999999999999999999999999643   23789999999999999999998754 44576766   6655


Q ss_pred             HHHHhcCCCcHHHHHHHHHHHHHc----ccCChhhHHHHHHHHHHHHhhhhccccccCCCCchhHHHHHHHHHHHHHHHh
Q 015152          251 LAIVLDSKHRPRCIIEFISQSLQL----LNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTL  326 (412)
Q Consensus       251 l~~l~~~~n~P~~il~~l~~~l~~----~~l~~~~~~~m~~~l~~l~d~~G~cERI~~TPiP~sYt~h~~~fl~lylllL  326 (412)
                      .+.+.++.|+|++++..+++.+++    |.+++....+|++.++++.+++|+||||++||||++|++|+++++++|++++
T Consensus       155 ~~~l~~~~~~p~~i~~~~~~~l~~~~~~g~~~~~~~~~l~~~l~~l~~~~g~~eri~~TPiP~~Y~~~~~~~l~~y~~~l  234 (293)
T PF01062_consen  155 ERRLESADNPPNWILIQWSQRLREARREGLIDSFQLAQLDNELNALRDAQGGCERIKNTPIPFAYTQHLSRFLYIYLLLL  234 (293)
T ss_pred             HHHHHhhcCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHhhhheeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence            558888899999999888877754    5689999999999999999999999999999999999999999999999999


Q ss_pred             hhHhhhcCCcchhHHHHHHHHHHHHHHHHHHHhhCCCCC----CCHHHHHHHHHHHHHH
Q 015152          327 PIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQE  381 (412)
Q Consensus       327 Pf~Lv~~~gW~tip~t~lva~~llGie~Ig~eIEePFg~----LPLd~ic~~Ie~~l~e  381 (412)
                      ||++++++||++||++++++|+|+|+|+||+|||||||.    ||||++|++||+|++|
T Consensus       235 Pf~l~~~~~~~~~~~~~l~~~~~~gl~~ig~~ledPFg~d~~dlpl~~~~~~ie~~l~~  293 (293)
T PF01062_consen  235 PFGLVDSLGWLTPPITFLVSFFFLGLEEIGEELEDPFGNDPNDLPLDAICRTIERNLRQ  293 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCcCcHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999985    9999999999999975

It is encoded by the VMD2 gene, which is mutated in Best macular dystrophy, a disease characterised by a depressed light peak in the electrooculogram []. VMD2 encodes a 585-amino acid protein with an approximate mass of 68 kDa which has been designated bestrophin. Bestrophin shares homology with the Caenorhabditis elegans RFP gene family, named for the presence of a conserved arginine (R), phenylalanine (F), proline (P), amino acid sequence motif. Bestrophin is a plasma membrane protein, localised to the basolateral surface of RPE cells consistent with a role for bestrophin in the generation or regulation of the EOG light peak. Bestrophin and other RFP family members represent a new class of chloride channels, indicating a direct role for bestrophin in generating the light peak []. The VMD2 gene underlying Best disease was shown to represent the first human member of the RFP-TM protein family. More than 97% of the disease-causing mutations are located in the N-terminal RFP-TM domain implying important functional properties []. This entry also includes a number of hypothetical proteins belonging to protein family UPF0187.

>KOG3547 consensus Bestrophin (Best vitelliform macular dystrophy-associated protein) [General function prediction only]

Probab=99.85  E-value=3e-20  Score=191.44  Aligned_cols=259  Identities=13%  Similarity=0.136  Sum_probs=194.5

Q ss_pred             ccchhHHHHHHhcchhhHhhhHHHHHHHHHHHHHHHHHhhhhhccCCCCcccccccCCchhhhhhhHHHHHHHhcchhHH
Q 015152           98 SSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASY  177 (412)
Q Consensus        98 s~~R~~~~ll~~~~gsV~~~i~~~vl~~~~~a~~V~~l~~~~~~~~~p~~~p~l~~~~~p~sllg~aLsLLLvFRtNsaY  177 (412)
                      +....+.++++.|+|||++.|+.+++++.+...+|.+++++.........++.+......+ .-.++|+|+|||..++..
T Consensus        12 ~~~~~f~kll~rWkGSiwKai~~el~~~l~~Y~~i~~iYR~~l~~~qq~~Fe~~~~~~d~~-~~~iPLtFmLGFfVt~Vv   90 (450)
T KOG3547|consen   12 SYSFTFLKLLLRWKGSIWKAIWKELLIWLILYYIISVIYRFALTESQQETFEKFVMYCDSR-LDFIPLTFMLGFFVTIVV   90 (450)
T ss_pred             hccHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcc-cccccchHhhhhhHHHHH
Confidence            4566788999999999999999999999999999998888543222222233332211111 123489999999999999


Q ss_pred             HHHHHHHHHhhHHHHhHHHHHHHHHhcCCCCC--chHHHHHHHHHHH-HHHH-----HHHhcccCCCCCchhH--hhhcC
Q 015152          178 SRFVDGKKAWTQIIAGTNDFATMVISGTDNST--DECIKDSLLRYIM-AFPV-----ALKGHVICDSDVSGDL--QDLLD  247 (412)
Q Consensus       178 ~RwwEaRk~WG~ivn~sR~lar~~~~~~~~~~--d~~~~~~l~r~li-Af~~-----aLk~hLR~~~~~~~eL--~~lL~  247 (412)
                      +|||+.-..-|.+    ++++..+++++++.+  ....|+.++||++ +-+.     ++|-..|. ++ .+.+  +|+|+
T Consensus        91 ~RW~~~f~nig~i----d~~a~~vs~~i~g~d~~~r~~RRtIiRY~vLsqvLv~RdIS~~VrkRF-Pt-~d~lv~AG~mt  164 (450)
T KOG3547|consen   91 DRWWKQFRNIGWI----DNLALLVSAYIPGTDERARLIRRTIIRYLVLSQVLVFRDISMKVRKRF-PT-LDHLVEAGLMT  164 (450)
T ss_pred             HHHHHHHhccCch----HHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC-hHHHHHhcCCc
Confidence            9999999999999    688888889998743  2346788888884 3332     33334443 22 3344  78999


Q ss_pred             HhHHHHHhcC---CC-c---H-HHHHHHHHHHHHcccCChhhHHHHHHHHHHHHhhhhccccccC---CCCchhHHHHHH
Q 015152          248 ADDLAIVLDS---KH-R---P-RCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMG---IPIPLSYTRLTS  316 (412)
Q Consensus       248 ~~El~~l~~~---~n-~---P-~~il~~l~~~l~~~~l~~~~~~~m~~~l~~l~d~~G~cERI~~---TPiP~sYt~h~~  316 (412)
                      ++|++.+.+.   .| +   | +|+.+.+.++.++|.+.+.-  .++..+.++.+...+|+.+.+   .|||++|+|.+.
T Consensus       165 ~~E~~~~~~~~~~~~~kyw~Pi~Wa~sl~~~a~~~g~i~~d~--~~~~~~~ei~~fR~~l~~L~~yDwVpIPL~YpQvV~  242 (450)
T KOG3547|consen  165 EEELDILENIVDSKYMKYWVPINWAFSLLRKARKEGRIESDY--LYNSLLGEIKKFRTGLSLLCNYDWVPIPLVYPQVVF  242 (450)
T ss_pred             HHHHHHHHhcccccccceeecHHHHHHHHHHHHHcCCccccH--HHHHHHHHHHHHHHhhccccCCCceeccccccceee
Confidence            9999988543   34 2   5 69999999999999884432  334445566666666777766   999999999999


Q ss_pred             HHHHHHHHHhhhH--hhh-------cCCcchhHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 015152          317 RFLVLWHLTLPII--LWD-------DCHWIVVPATFISAASLFCIEEVGVLIEEPFPM  365 (412)
Q Consensus       317 ~fl~lylllLPf~--Lv~-------~~gW~tip~t~lva~~llGie~Ig~eIEePFg~  365 (412)
                      ..+.+|.++.=|+  ..+       ..+++.|.+|.+...+++|+.++|+.+-||||.
T Consensus       243 lAVr~YF~~cL~~RQ~l~~~~~~~~~id~~fPi~T~lQFiF~vGWmKVaE~LlNP~GE  300 (450)
T KOG3547|consen  243 LAVRSYFFICLFGRQYLDRDDSKKTEIDLYFPIMTILQFIFYVGWLKVAEVLLNPLGE  300 (450)
T ss_pred             eehHHhHHHHhhccccCCcccccccccceeehhHHHHHHHHHhhHHHHHHHHhCCCCC
Confidence            9999998887776  222       467999999999999999999999999999994

>PF14023 DUF4239: Protein of unknown function (DUF4239)

Probab=97.31  E-value=0.052  Score=51.08  Aligned_cols=67  Identities=19%  Similarity=0.347  Sum_probs=52.0

Q ss_pred             hhhhhhHHHHHHHhcchhHHHHHHHHHHHhhHHHHhHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHH
Q 015152          158 YQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVAL  228 (412)
Q Consensus       158 ~sllg~aLsLLLvFRtNsaY~RwwEaRk~WG~ivn~sR~lar~~~~~~~~~~d~~~~~~l~r~liAf~~aL  228 (412)
                      ++.+|+..|++|+|=.+.+|+|+.++++.--.=.+..+++.+.+..+...+.    ++++...+..|..++
T Consensus         2 ~~~vg~l~al~laf~~~~~~~~~~~a~~~v~~EA~al~~l~~~~~~lp~~~~----~~~~r~~l~~Y~~~v   68 (209)
T PF14023_consen    2 FGVVGVLFALLLAFTISSAWSRYDNARQAVNQEANALGTLYRLLASLPEPPD----RDEIRALLRAYTRAV   68 (209)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCch----hHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999887641221    334445555555554

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	412
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 52/278 (18%), Positives = 90/278 (32%), Gaps = 99/278 (35%)

Query: 10  ILPPSHFIPKTLLKL----QPSITTLTFPSKSPNPLTFKTLSCLESQSQSETKTLTLISV 65
           + PPS  IP  LL L          +   +K          S +E Q +  T +      
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNK------LHKYSLVEKQPKESTIS------ 427

Query: 66  LRAIPDWADRVKERGVKQKRTLYSHEKWVEHRSSLR------------------HV-RHL 106
              IP     +K + ++ +  L  H   V+H +  +                  H+  HL
Sbjct: 428 ---IPSIYLELKVK-LENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 107 LS-SLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPV-LRASSLPYQLTAPA 164
            +     R+ L        F MV      +   LD      FL   +R  S  +  +   
Sbjct: 482 KNIEHPERMTL--------FRMV------F---LDFR----FLEQKIRHDSTAWNASGSI 520

Query: 165 LALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAF 224
           L  L   +    Y  ++                        DN       + L+  I+ F
Sbjct: 521 LNTLQQLKF---YKPYI-----------------------CDNDPK---YERLVNAILDF 551

Query: 225 PVALKGHVICD--SDVSGDLQDLLDADDLAIVLDSKHR 260
              ++ ++IC   +D+   L+  L A+D AI  ++ H+
Sbjct: 552 LPKIEENLICSKYTDL---LRIALMAEDEAIFEEA-HK 585

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00