Citrus Sinensis ID: 015427

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------
Protein Sequence
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEccccccHHHHHHHccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccHHHHHHccccccccccccccccccccccccccEEEEcccccEEEEEEEEcccccccccccccccEEccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mawwssasasstfnsSFLLRSSlssysnkklssnhvahappslfspyitinsfKKRCIIVTNCtttnkknmessstvdcvetgtdveclisptdkeEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFAssqgrklpsgfNAWVSIFLFALVDASCFQGFLAQGLqrtsaglgsviidsqPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLleapafdesnsslwgsGEWWMLLAAQSMAVGTVMVRWVSkysdpvmatgwHMVIGGLPLMVISVLnhdpvygesvkeLTSSDILALLYTSIFGSAISYGVYFYsatkgsltklssltfltpMFASIFGFLylgetfsplqlVGAAVTVVAIYLVNFRGSV
Flexible Loop (DISEMBL)
mawwssasasstfnsSFLLRSSLSSYSNKKLSSNHvahappslfspyitINSFKKRCIIVTNCtttnkknmessstvdcvetgTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Low Complexity Region (SEG)
MawwssasasstfnssfllrsslssysnkklssNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESiglvgagglvlgvigllllEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYsatkgsltklssltfltPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Disordered region (IsUnstruct)
*****************************************SLFSPYITINSFKKRCIIVTNCTTTN*********VDCVETGTDVECLI*****************QVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF****
Disordered Region (DISOPRED)
********AS***NSSFLLRSSLS***N*K***NHVAHAPPSLFSPYITINSFK*************************VETGTDVEC*****************************WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG**
Disordered Region (DISEMBL)
*************NSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKK*********CVETGTDVECLISPTDK*********QDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Disordered Region (DISPRO)
***************************************PPSLFSPYITINSFKKRCIIVTNCTTT******SSSTVDCVETGTDVECLISP****************VMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAWWSSASASSTFNSSFLLRSSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCIIVTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	407	2.2.26 [Sep-21-2011]
Q93V85	417	WAT1-related protein At3g	yes	no	0.791	0.772	0.765	1e-132
P74436	330	Uncharacterized transport	N/A	no	0.687	0.848	0.511	3e-68
O34416	292	Uncharacterized transport	yes	no	0.678	0.945	0.250	4e-13
O32256	305	Uncharacterized transport	no	no	0.660	0.881	0.281	2e-11
P42194	297	Protein PecM OS=Dickeya d	yes	no	0.626	0.858	0.287	8e-09
O29740	289	Uncharacterized transport	yes	no	0.646	0.910	0.259	2e-08
O29973	276	Uncharacterized transport	no	no	0.646	0.952	0.222	4e-07
P96680	306	Uncharacterized transport	no	no	0.614	0.816	0.260	5e-07
Q56072	299	Probable amino-acid metab	yes	no	0.486	0.662	0.259	7e-06
B0B8F4	327	S-adenosylmethionine/S-ad	yes	no	0.658	0.819	0.262	7e-06

>sp|Q93V85|WTR16_ARATH WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana GN=At3g02690 PE=1 SV=1

 Score =  471 bits (1213), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/329 (76%), Positives = 283/329 (86%), Gaps = 7/329 (2%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC+ +  D EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQGFLA
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQGFLA 203

Query: 197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF--D 254
           QGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LGV GLLLLE P+   D
Sbjct: 204 QGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSVTSD 263

Query: 255 ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH 314
            +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+NH
Sbjct: 264 GNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVINH 323

Query: 315 DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIF 374
           DPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTKLSSLTFLTPMFASIF
Sbjct: 324 DPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFASIF 383

Query: 375 GFLYLGETFSPLQLVGAAVTVVAIYLVNF 403
           G+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 GYLYLNETFSSLQLVGAAVTLVAIYLVNF 412

Arabidopsis thaliana (taxid: 3702)

>sp|P74436|Y355_SYNY3 Uncharacterized transporter sll0355 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0355 PE=3 SV=1

 Score =  259 bits (662), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/297 (51%), Positives = 198/297 (66%), Gaps = 17/297 (5%)

Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
           L++PFF WGTAMVAMK VL     FFVA  RLIPAG+L++ +A  Q R  P  +  W  I
Sbjct: 17  LIAPFFLWGTAMVAMKGVLADTTPFFVATVRLIPAGILVLLWAMGQKRPQPQNWQGWGWI 76

Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE-----SIGLVGA 235
            LFALVD + FQGFLAQGL+RT AGLGSVIIDSQP++VA+L++ LF E         +  
Sbjct: 77  ILFALVDGTLFQGFLAQGLERTGAGLGSVIIDSQPIAVALLSSWLFKEVIGGIGWLGLLL 136

Query: 236 GGLVLGVIG--------LLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
           G   + +IG        L  L+  + + S S+L  SGE WMLLA+ SMAVGTV++ +VS+
Sbjct: 137 GVGGISLIGLPDEWFYQLWHLQGLSINWSGSALGSSGELWMLLASLSMAVGTVLIPFVSR 196

Query: 288 YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV 347
             DPV+ATGWHM+IGGLPL+ I+++       E  + +       L Y ++FGSAI+YG+
Sbjct: 197 RVDPVVATGWHMIIGGLPLLAIALVQDS----EPWQNIDLWGWGNLAYATVFGSAIAYGI 252

Query: 348 YFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 404
           +FY A+KG+LT LSSLTFLTP+FA  F  L L E  S LQ +G A T+V+IYL+N R
Sbjct: 253 FFYLASKGNLTSLSSLTFLTPIFALSFSNLILEEQLSSLQWLGVAFTLVSIYLINQR 309

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|O34416|YOAV_BACSU Uncharacterized transporter YoaV OS=Bacillus subtilis (strain 168) GN=yoaV PE=3 SV=1

 Score = 76.3 bits (186), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 15/291 (5%)

Query: 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
           ++S    WG   VAMK  +        +  RL    + L      Q +KL        S 
Sbjct: 8   IISVTLIWGYTWVAMKVGIHDIPPLLFSGLRLFIGAVPLFLILFIQRKKLSIQKEHLKSY 67

Query: 181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVL 240
            + +L+    + G L  G+Q   +G  SV++ + P+ V V++     E + +    GLV 
Sbjct: 68  IIMSLLMGLGYMGILTYGMQFVDSGKTSVLVYTMPIFVTVISHFSLNEKMNVYKTMGLVC 127

Query: 241 GVIGLLLL---EAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGW 297
           G+ GLL +   E    D+S       GE  +L+AA S  +  V  +   K+ D +    W
Sbjct: 128 GLFGLLFIFGKEMLNIDQSAL----FGELCVLVAALSWGIANVFSKLQFKHIDIIHMNAW 183

Query: 298 HMVIGGLPLMVISVLNHDPVYGESV--KELTSSDILALLYTSIFGSAISYGVYFYSATKG 355
           H+++G + L+V S +       E+V   E T   + +LL+  +  +  ++ V+F+   + 
Sbjct: 184 HLMMGAVMLLVFSFIF------EAVPSAEWTYQAVWSLLFNGLLSTGFTFVVWFWVLNQI 237

Query: 356 SLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 406
             +K S      P+ A  FG+L L E  +   ++GA +    I++  F  S
Sbjct: 238 QASKASMALMFVPVLALFFGWLQLHEQITINIILGALLICCGIFMNTFTFS 288

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|O32256|YVBV_BACSU Uncharacterized transporter YvbV OS=Bacillus subtilis (strain 168) GN=yvbV PE=3 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 8/277 (2%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WG      K  L  +     A  R +  GLLL+  A  +  KL      W    + AL++
Sbjct: 20  WGVNWPLSKAALAYSPPLLFAGIRTLIGGLLLVIVALPRIHKLRLK-ETWPIYLVSALLN 78

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247
            + F G    GL    AGL S I+  QP+ + V + L  GES+ ++   GL+LG  G+ +
Sbjct: 79  ITLFYGLQTIGLNYLPAGLFSAIVFFQPVLMGVFSWLWLGESMFVMKVIGLILGFAGVAV 138

Query: 248 LEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLM 307
           + A  F    S +   G    L +A S A+GTV ++      D +      + IG + L+
Sbjct: 139 ISAAGFGGHISVI---GVLLALGSAVSWALGTVYMKKTGSRVDSIWMVALQLTIGSVFLL 195

Query: 308 VISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT 367
           +            S  + T+  I +LL+ S+F  A+ + V+F     G  +K++S TFL 
Sbjct: 196 ISGFWTES----FSAIQWTAPFITSLLFISVFVIALGWLVFFTLVGSGEASKVASYTFLI 251

Query: 368 PMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 404
           P+ + +   ++L E  +   L G  + V +I LVN +
Sbjct: 252 PLISIVASSIFLHEPLTLSLLAGLLLIVTSICLVNTK 288

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P42194|PECM_DICD3 Protein PecM OS=Dickeya dadantii (strain 3937) GN=pecM PE=3 SV=1

 Score = 62.0 bits (149), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 27/282 (9%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WGT      + LP       A  R +PAG++LI      G+ LP     W  +F+   ++
Sbjct: 14  WGTTYFVTTQFLPADKPLLAALIRALPAGIILIL-----GKNLPPVGWLW-RLFVLGALN 67

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGL-L 246
              F   L     R   G+ +++   QPL V +L+ LL  + +        V G IG+ L
Sbjct: 68  IGVFFVMLFFAAYRLPGGVVALVGSLQPLIVILLSFLLLTQPVLKKQMVAAVAGGIGIVL 127

Query: 247 LLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP-----VMATGWHMVI 301
           L+  P    + + L  S      LA  SMA G V+ +   K+  P     +  TGW +  
Sbjct: 128 LISLPKAPLNPAGLVASA-----LATMSMASGLVLTK---KWGRPAGMTMLTFTGWQLFC 179

Query: 302 GGLPLMVISVLNHDPVYGESVKEL-TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKL 360
           GGL ++ + +L       E + +L T +++   LY +I GS ++Y ++F      S   +
Sbjct: 180 GGLVILPVQMLT------EPLPDLVTLTNLAGYLYLAIPGSLLAYFMWFSGLEANSPVIM 233

Query: 361 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 402
           S L FL+P+ A + GFL+L +  S  QLVG      A+ +V 
Sbjct: 234 SLLGFLSPLVALLLGFLFLQQGLSGAQLVGVVFIFSALIIVQ 275

Involved in pectinase, cellulase, and blue pigment regulation.

Dickeya dadantii (strain 3937) (taxid: 198628)

>sp|O29740|Y510_ARCFU Uncharacterized transporter AF_0510 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0510 PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 14/277 (5%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFAS-SQGRKLPSGFNAWVSIFLFALV 186
           W  + + +K  L +   F +A +R + A  LL+ +    +G   PSG + W+ + + AL 
Sbjct: 16  WAGSFIFIKIGLKELDPFNLAFYRFLLASPLLMAWVFWKRGLAKPSG-SEWLHLSVLALS 74

Query: 187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLL 246
             +    F    L+ T+A   S++I++  + VA L  L+ GE+       G+ L   G++
Sbjct: 75  GVTLLYAFQFLALKYTTATNASILINTSAVFVA-LWGLVKGEA-NPRKLAGVFLSFAGVV 132

Query: 247 LLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVM-VRWVSKYSDPVMATGWHMVIGGLP 305
           L+ +    E  SS    G+  M++     AV TV+  + + KY    + T +   +G + 
Sbjct: 133 LIVSKGTLEFFSSKTIFGDVLMIVDGFLWAVYTVLGSKMLLKYDHETL-TAYAFALGTIF 191

Query: 306 LMVISVLN--HDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSL 363
           L+  ++++   +PV            + ALLY SI  S  +Y V++Y+ T    T ++  
Sbjct: 192 LIPFALMSGFANPV------TFNPETVAALLYLSILCSVFAYVVWYYALTNADSTSVAVY 245

Query: 364 TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 400
            +L P+F +IF F  L E       +G  +T+  +YL
Sbjct: 246 VYLVPLFTAIFAFYALNEKPDFFTAIGGIITIAGVYL 282

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

>sp|O29973|Y266_ARCFU Uncharacterized transporter AF_0266 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0266 PE=3 SV=1

 Score = 56.2 bits (134), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 135/292 (46%), Gaps = 29/292 (9%)

Query: 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPA----GLLLITFASSQGRKLPS 172
           +W VL     FWG A  A+K  +       +A+ R   A     +++I     + + LP 
Sbjct: 3   KWIVLALTVTFWGLAFTAIKYSVRFLSPIAIASLRFAIANTLFAVIIILGKRIKWKDLPK 62

Query: 173 GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGL 232
                  +F   +   S +  FL  G    S+G+ SV+I   P+ V +L+A+   E I  
Sbjct: 63  -------VFALGIFGVSVYHVFLNLGEVYISSGVASVVISLAPIFVLILSAIFLRERITY 115

Query: 233 VGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDP 291
               G+++  +G++++  P++    ++++G     ++++  + A+ T   +  +SKY +P
Sbjct: 116 SKVVGIIIAFLGVVVISEPSY----ANIYGIA--LVMVSTVAAAIYTTFGKSLLSKY-NP 168

Query: 292 VMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS--SDILALLYTSIFGSAISYGVYF 349
           +  T   MV+G +PL         P   +S++ L    + I ++++  IF +   Y  ++
Sbjct: 169 ITLTSNAMVLGSIPLY--------PFLPDSIRSLGGDLNLIGSIVFLGIFSTFFGYLGWY 220

Query: 350 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 401
           Y   K   ++ S      P+ + + G + L E  +   + G+ + ++ IY+V
Sbjct: 221 YFLEKEEASRASVFLLAIPVVSLLAGNILLAEPLTLRTVAGSGLVLLGIYIV 272

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

>sp|P96680|YDFC_BACSU Uncharacterized transporter YdfC OS=Bacillus subtilis (strain 168) GN=ydfC PE=3 SV=1

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 15/265 (5%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           W +A   ++  L       +A FRL+   + L+ FA     +LP       +IFL   + 
Sbjct: 19  WASAFPGIRAGLEGYTPEHLALFRLLIGSMALLLFAVLTQMRLPD-LKDIPAIFLLGFLG 77

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247
            + +   L  G +  SAG+ S+++ + P+  A+L+ L + E  G     G ++ ++G+LL
Sbjct: 78  FAFYHILLNIGEKTVSAGVASLLVTTAPIFSAMLSRLFYKEHFGFTKWLGSMISLLGVLL 137

Query: 248 LEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVM-VRWVSKYS--DPVMATGWHMVIGGL 304
           +   A D + S    SG   +LLAA S ++  V   R++ KY     V  T W    G +
Sbjct: 138 IAFGAGDFTYSM---SGILVILLAAFSESIYFVFQARYIKKYGFIPFVTFTIWG---GTI 191

Query: 305 PLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT 364
           P++V       P  GE +   + S  L+++Y  +  + I Y    Y  +    ++ +   
Sbjct: 192 PMLVFL-----PGLGEEMMNASISATLSIVYLGLLPTVIPYFALAYVTSFVGASEATLSL 246

Query: 365 FLTPMFASIFGFLYLGETFSPLQLV 389
           ++TP  A I  +L++GE  + L L+
Sbjct: 247 YVTPALALIISWLWIGEIPTLLSLL 271

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q56072|EAMA_SALTY Probable amino-acid metabolite efflux pump OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=eamA PE=3 SV=2

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)

Query: 204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGS 263
           AGL S+++ +Q      L A +F E +      G+ L +IG+L+L   + +  + ++  S
Sbjct: 86  AGLASLVLQAQAFFTMALGAFVFSERLQRKQLAGIALAIIGVLVLIEASLNGQHIAM--S 143

Query: 264 GEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMA-TGWHMVIGGLPLMVISVLNHDPVY-G 319
           G    L AA S A G +  + + ++S    VM+   W  +I  LP ++ S+L     +  
Sbjct: 144 GFMLTLAAAFSWACGNIFNKKIMQHSPRPAVMSLVVWSALIPILPFLLSSLLLEGADHIT 203

Query: 320 ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYL 379
           +S+  +  + IL+LLY +   + + YG++     +    +++ L+ L P+       + L
Sbjct: 204 QSLITIDMTTILSLLYLAFVATILGYGIWGALLGRYETWRVAPLSLLVPVVGLASAAVLL 263

Query: 380 GETFSPLQLVGAAVTVVAIYLVNF 403
           GET + +QL GA + +  +Y+  F
Sbjct: 264 GETLTGMQLAGAVLIMAGLYINVF 287

May be an export pump for several amino acids and their metabolites, including cysteine.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

>sp|B0B8F4|SAMHT_CHLT2 S-adenosylmethionine/S-adenosylhomocysteine transporter OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) GN=CTL0843 PE=1 SV=1

 Score = 52.4 bits (124), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 29/297 (9%)

Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLL--ITFASSQGRKLPSGFNAWVSIFLF 183
           F W ++    K  +  A   FV   R++ AG++L  +     +  +LP    A + I L 
Sbjct: 34  FIWSSSFALSKSAMEAAAPLFVTGSRMVLAGVVLFGLLLCKRESLRLPR--PAIMPIVLL 91

Query: 184 ALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVI 243
           +++           GLQR S+     I    P + A  + +   E +     GGL LG++
Sbjct: 92  SVIGFYLTNVLEFIGLQRLSSSTACFIYGFSPFTAAFCSYVQLREVVTWKKLGGLSLGLV 151

Query: 244 GLLLLEAPAFDESNSSLWGSGEWW-------MLLAAQSMA-VGTVMVRWVSKYSDPVMAT 295
             L+       E  +  WG    W       +L+AA  ++  G  ++R + +  + +  T
Sbjct: 152 SYLVYLLFGGSEDVAE-WG----WQLGLPELLLIAATCLSSYGWTLLRKLGRRCESLSMT 206

Query: 296 G---WHMVIGGLPLMVISVLNH--DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 350
               + MVI G+  ++ S +    +PV  E+   L    I AL+   IF + I Y ++  
Sbjct: 207 AINAYAMVIAGVLSLIHSAVTEVWNPVPVEN-PLLFLQAIGALV---IFSNLICYNLFAK 262

Query: 351 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVA---IYLVNFR 404
                S T LS    + P+FAS FG+L LGE+F P  L      V+    IY   FR
Sbjct: 263 LLRSFSSTFLSFCNLVMPLFASFFGWLLLGESFPPGLLFAVGFMVLGCRLIYHEEFR 319

Transports S-adenosylmethionine (SAM) and S-adenosylhomocysteine (SAH). Allows bacteria to acquire SAM from the eukaryotic host cell and to likely remove the toxic by-product SAH.

Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) (taxid: 471472)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	407
356569422	412	PREDICTED: uncharacterized transporter s	0.975	0.963	0.670	1e-143
356537734	412	PREDICTED: uncharacterized transporter s	0.837	0.827	0.751	1e-141
297828730	424	integral membrane family protein [Arabid	0.936	0.898	0.691	1e-134
255579425	475	Protein pecM, putative [Ricinus communis	0.955	0.818	0.678	1e-133
18396278	417	nodulin MtN21 /EamA-like transporter pro	0.791	0.772	0.765	1e-130
225466171	382	PREDICTED: uncharacterized transporter s	0.722	0.769	0.824	1e-128
6957732	432	unknown protein [Arabidopsis thaliana]	0.791	0.745	0.729	1e-127
449445186	424	PREDICTED: uncharacterized transporter s	0.862	0.827	0.703	1e-125
224119940	279	predicted protein [Populus trichocarpa]	0.675	0.985	0.855	1e-122
116786937	464	unknown [Picea sitchensis]	0.842	0.739	0.639	1e-120

>gi|356569422|ref|XP_003552900.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/416 (67%), Positives = 321/416 (77%), Gaps = 19/416 (4%)

Query: 2   AWWSSASASSTFNSSFLLR--SSLSSYSNKKLSSNHVAHAPPSLFSPYITINSFKKRCII 59
           +WW S+ +++   S+   R  S LS  S  ++ +      PPS F+ + T     +  + 
Sbjct: 3   SWWCSSPSATLTVSTTTTRHFSLLSHTSQFRIQTLTF---PPSSFTRFTTAPPSLRFRVP 59

Query: 60  VTNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLL--- 116
            +N T    +  E    VDCV TG DVECL+   + EE + E             +L   
Sbjct: 60  CSNKTAFETELPEDG--VDCVGTGQDVECLV---NTEEKQSEPSSSSSSSSSSSSMLCLA 114

Query: 117 ----EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS 172
               E AVLVSPFFFWGTAMVAMKEVLPK G FFV+AFRLIPAG LL+ FA+S+GR LPS
Sbjct: 115 EALWEGAVLVSPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRTLPS 174

Query: 173 GFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGL 232
           GFNAW+SI LFALVDA+CFQGFLA+GLQRTSAGLGSVIIDSQPL+VAVLAALLFGESIG+
Sbjct: 175 GFNAWLSITLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGV 234

Query: 233 VGAGGLVLGVIGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD 290
           VGA GLVLGVIGL+LLE PA  FDESN SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSD
Sbjct: 235 VGAAGLVLGVIGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSD 294

Query: 291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 350
           PVMATGWHMVIGGLPL++ +VLN+DP    S+KE +S+DILALLYTSIFGSA+SYGV+FY
Sbjct: 295 PVMATGWHMVIGGLPLVLFAVLNNDPAVSLSLKEYSSTDILALLYTSIFGSAVSYGVFFY 354

Query: 351 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 406
           SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSP+QLVGA VTV  IY+VNFR +
Sbjct: 355 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLVGALVTVAGIYMVNFRST 410

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537734|ref|XP_003537380.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 260/346 (75%), Positives = 291/346 (84%), Gaps = 5/346 (1%)

Query: 66  TNKKNMESS---STVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLV 122
           +NK   E+      VDCV TG DVECL++  +K+            +     L E AVLV
Sbjct: 65  SNKTAFETELPEDGVDCVGTGQDVECLVNTEEKQSEPTSSSSSSSMLCLAEALWEGAVLV 124

Query: 123 SPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFL 182
           SPFFFWGTAMVAMKEVLPK G FFV+AFRLIPAG LL+ FA+S+GR LPSGF AW+SI L
Sbjct: 125 SPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRSLPSGFIAWLSITL 184

Query: 183 FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGV 242
           FALVDA+CFQGFLA+GLQRTSAGLGS+IIDSQPL+VAVLAALLFGESIG+VGA GLVLGV
Sbjct: 185 FALVDATCFQGFLAEGLQRTSAGLGSIIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGV 244

Query: 243 IGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV 300
           IGL+LLE PA  FDESN SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV
Sbjct: 245 IGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV 304

Query: 301 IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKL 360
           IGGLPL++ +VLN+DP    S+KE +S+DILALLYTS+FGSA+SYGV+FYSATKGSLTKL
Sbjct: 305 IGGLPLVLFAVLNNDPALSLSLKEYSSTDILALLYTSVFGSAVSYGVFFYSATKGSLTKL 364

Query: 361 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 406
           SSLTFLTPMFASIFGFLYLGETFSP+QLVGA VTV  IY+VN R +
Sbjct: 365 SSLTFLTPMFASIFGFLYLGETFSPVQLVGALVTVAGIYMVNLRST 410

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828730|ref|XP_002882247.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297328087|gb|EFH58506.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/396 (69%), Positives = 317/396 (80%), Gaps = 15/396 (3%)

Query: 18  LLRSSLSSYSNKKLSSNHVAHAPPSLF-SPYITINSFKKRCI---IVTNCTTTNKKNMES 73
           + R + SS +NK  S+  V     S F S +I ++ FK+R     +V   TT+NK   E+
Sbjct: 29  ITRRANSSCANKYPSNILVKSLRHSRFDSKHILVSIFKRRINGDSVVRRSTTSNKSTEET 88

Query: 74  SST----VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWG 129
            S+    VDCV  G+DVEC+ +  D EE     +   G+    G LLEW VL+SPFFFWG
Sbjct: 89  ESSSSSSVDCVGMGSDVECVYNGED-EENRSSGILNGGE----GTLLEWTVLISPFFFWG 143

Query: 130 TAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDAS 189
           TAMVAMKEVLP  G FFVAAFRLIPAGLLL+ FA  + R LP G NAW+SI LFALVDA+
Sbjct: 144 TAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKARPLPKGINAWLSIALFALVDAT 203

Query: 190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE 249
           CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LGV GLLLLE
Sbjct: 204 CFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLE 263

Query: 250 APAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLM 307
            P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+
Sbjct: 264 VPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLL 323

Query: 308 VISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT 367
            ISV+NHDPV+  S++EL+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTKLSSLTFLT
Sbjct: 324 AISVINHDPVFNGSLQELSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLT 383

Query: 368 PMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 403
           PMFASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 PMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 419

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579425|ref|XP_002530556.1| Protein pecM, putative [Ricinus communis] gi|223529894|gb|EEF31824.1| Protein pecM, putative [Ricinus communis]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 283/417 (67%), Positives = 327/417 (78%), Gaps = 28/417 (6%)

Query: 18  LLRSSLSSYSNKKLSSNHVAHAP-------PSLFSPYITINSFKKRCI---IVTNCTTTN 67
           LL  SL +  + K S  H++  P       PS  S +   +S +        + NCTT++
Sbjct: 3   LLSPSLPNNLSVKFSLLHISPPPYNRLFKYPSPISSHTITDSTRTTRRRPNFIANCTTSS 62

Query: 68  KK-NMESSST----VDCVETGTDVECLISP----------TDKEEIEQEQVEQDGQVMEL 112
           +   +ES+S+    +DCV TG DVECLIS           T+   +EQ + E++ +  +L
Sbjct: 63  RNVGLESTSSDSTDLDCVGTGLDVECLISSESSSNGTMSSTETTAVEQGREERESKRDDL 122

Query: 113 -GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP 171
             M++E  VLVSPFFFWGTAMVAMKEVLP  G FFVAAFRLIPAGL+LI FA+ + R  P
Sbjct: 123 LEMVVENGVLVSPFFFWGTAMVAMKEVLPLTGPFFVAAFRLIPAGLILIAFAAYKDRPFP 182

Query: 172 SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIG 231
           SGFNAW+SIFLF LVDA+ FQGFLA+GLQRTSAGLGSVIIDSQPL+VAVLAALLFGESIG
Sbjct: 183 SGFNAWLSIFLFGLVDATFFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIG 242

Query: 232 LVGAGGLVLGVIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS 289
           LVGAGGLVLGV+GLLLLE PA   D+SN SLWGSGEWWMLLAAQSMAVGTVMVRWV+KYS
Sbjct: 243 LVGAGGLVLGVVGLLLLEVPALSIDQSNFSLWGSGEWWMLLAAQSMAVGTVMVRWVTKYS 302

Query: 290 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 349
           DPVMATGWHMVIGGLPL VIS+LNHDP++  S++ELT SDI ALLYTSIFGSAISYGV+F
Sbjct: 303 DPVMATGWHMVIGGLPLTVISILNHDPLFNGSLQELTVSDIAALLYTSIFGSAISYGVFF 362

Query: 350 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 406
           YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQL GAAVT+VAIY++   G+
Sbjct: 363 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLFGAAVTLVAIYMLGPPGA 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396278|ref|NP_566180.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|16226571|gb|AAL16203.1|AF428434_1 AT3g02690/F16B3_32 [Arabidopsis thaliana] gi|15010664|gb|AAK73991.1| AT3g02690/F16B3_32 [Arabidopsis thaliana] gi|21593005|gb|AAM64954.1| unknown [Arabidopsis thaliana] gi|22137110|gb|AAM91400.1| At3g02690/F16B3_32 [Arabidopsis thaliana] gi|332640327|gb|AEE73848.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/329 (76%), Positives = 283/329 (86%), Gaps = 7/329 (2%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC+ +  D EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQGFLA
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQGFLA 203

Query: 197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF--D 254
           QGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LGV GLLLLE P+   D
Sbjct: 204 QGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSVTSD 263

Query: 255 ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH 314
            +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHMVIGGLPL+ ISV+NH
Sbjct: 264 GNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISVINH 323

Query: 315 DPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIF 374
           DPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTKLSSLTFLTPMFASIF
Sbjct: 324 DPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFASIF 383

Query: 375 GFLYLGETFSPLQLVGAAVTVVAIYLVNF 403
           G+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 GYLYLNETFSSLQLVGAAVTLVAIYLVNF 412

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466171|ref|XP_002263956.1| PREDICTED: uncharacterized transporter sll0355 [Vitis vinifera]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/296 (82%), Positives = 271/296 (91%), Gaps = 2/296 (0%)

Query: 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSG 173
           +L EW VLVSPFFFWGTAMVAMK+VLPKAG FFV++FRLIPAGLL+I +A+S+GRK PSG
Sbjct: 86  VLWEWGVLVSPFFFWGTAMVAMKQVLPKAGPFFVSSFRLIPAGLLIIAYAASRGRKQPSG 145

Query: 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLV 233
           F+AW+SIFLFALVDA+CFQGFLA+GLQRTSAGLGSVIIDSQPL+VAVLAALLFGESIG +
Sbjct: 146 FSAWLSIFLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGFI 205

Query: 234 GAGGLVLGVIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP 291
           GA GLVLGVIGLLLLE PA   D SN SLWGSGEWWMLLAAQSMAVGTVM+RWV+KYSDP
Sbjct: 206 GAAGLVLGVIGLLLLEVPALSVDGSNFSLWGSGEWWMLLAAQSMAVGTVMIRWVTKYSDP 265

Query: 292 VMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS 351
           VMATGWHMVIGGLPL++IS+LNHDP    S  ELTSSD+LALLYTSIFGSAISY V+FY 
Sbjct: 266 VMATGWHMVIGGLPLVLISILNHDPALSGSFNELTSSDLLALLYTSIFGSAISYSVFFYY 325

Query: 352 ATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV 407
           AT+GSLTKLSSLTFLTPMFASIFGFLYLGET SPLQLVGA VT++ IY+VN+R S+
Sbjct: 326 ATRGSLTKLSSLTFLTPMFASIFGFLYLGETLSPLQLVGALVTILGIYMVNYRDSM 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6957732|gb|AAF32476.1| unknown protein [Arabidopsis thaliana]

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/344 (72%), Positives = 283/344 (82%), Gaps = 22/344 (6%)

Query: 77  VDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMK 136
           VDCV  G+DVEC ++  + EE     +   G+    G  LEW VL+SPFFFWGTAMVAMK
Sbjct: 89  VDCVGMGSDVEC-VNNGEDEENRSSGILSGGE----GTFLEWTVLISPFFFWGTAMVAMK 143

Query: 137 EVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ---- 192
           EVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI LFALVDA+CFQ    
Sbjct: 144 EVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQILVC 203

Query: 193 -----------GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLG 241
                      GFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGESIG+V AGGL+LG
Sbjct: 204 MLVMLVRIMVQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLG 263

Query: 242 VIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHM 299
           V GLLLLE P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWHM
Sbjct: 264 VAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHM 323

Query: 300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTK 359
           VIGGLPL+ ISV+NHDPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFYSATKGSLTK
Sbjct: 324 VIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTK 383

Query: 360 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 403
           LSSLTFLTPMFASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct: 384 LSSLTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 427

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445186|ref|XP_004140354.1| PREDICTED: uncharacterized transporter sll0355-like [Cucumis sativus]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/364 (70%), Positives = 295/364 (81%), Gaps = 13/364 (3%)

Query: 53  FKKRCIIVTNCTTTN-KKNMESSSTVDCVETGTDVECLISPTDKEEIEQ----------E 101
           F    I V NCT +     ++ + ++DCV T  DVEC++SP D++               
Sbjct: 56  FHYVAIPVANCTRSGGDTELDFTESIDCVGTAQDVECVVSPNDEDPSSSIGVPLKLGISS 115

Query: 102 QVEQDGQVMELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLIT 161
               DG V  L    E+AVLVSPFFFWGTAMVAMKEVLP++G FFV+AFRLIPAG LLI 
Sbjct: 116 DYSGDGSVAVLEKAWEFAVLVSPFFFWGTAMVAMKEVLPRSGPFFVSAFRLIPAGFLLIA 175

Query: 162 FASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVL 221
           FA+ +GR  PSGF+AW+SI LFALVDA+ FQGFLAQGLQRTSAGLGSVIIDSQPL+VAVL
Sbjct: 176 FAAFRGRPFPSGFSAWISIILFALVDATFFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVL 235

Query: 222 AALLFGESIGLVGAGGLVLGVIGLLLLEAPA--FDESNSSLWGSGEWWMLLAAQSMAVGT 279
           AA LFGES+GLVGA GLVLGV+GLLLLE P+  FD ++ SLWGSGEWWM LAAQSMAVGT
Sbjct: 236 AAFLFGESLGLVGAAGLVLGVLGLLLLEVPSLTFDANSFSLWGSGEWWMFLAAQSMAVGT 295

Query: 280 VMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 339
           VMVRWVSKYSDP+MATGWHMVIGGLPL++I +LNHDP    S+K+ T++DILALLY SIF
Sbjct: 296 VMVRWVSKYSDPIMATGWHMVIGGLPLLMICILNHDPAVSGSLKDFTTNDILALLYASIF 355

Query: 340 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIY 399
           GSA+SYG +FYSATKGSLTKLSSLTFLTPMFAS+FGFLYLGETFSP+QLVGA VTVVAIY
Sbjct: 356 GSAVSYGSFFYSATKGSLTKLSSLTFLTPMFASVFGFLYLGETFSPIQLVGAVVTVVAIY 415

Query: 400 LVNF 403
           +VN+
Sbjct: 416 VVNY 419

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119940|ref|XP_002318202.1| predicted protein [Populus trichocarpa] gi|222858875|gb|EEE96422.1| predicted protein [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/277 (85%), Positives = 253/277 (91%), Gaps = 2/277 (0%)

Query: 132 MVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF 191
           MVAMKEVLP  G FFV++FRLIPAGLLL+ FA  +GR LPSG  AW++I LFALVDASCF
Sbjct: 1   MVAMKEVLPLTGPFFVSSFRLIPAGLLLVAFAGFKGRPLPSGLTAWLTITLFALVDASCF 60

Query: 192 QGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP 251
           QGFLAQGLQRTSAGLGSVIIDSQPL+VA+LA LLFGESIG+VGA GLVLGVIGLLLLE P
Sbjct: 61  QGFLAQGLQRTSAGLGSVIIDSQPLTVAILANLLFGESIGIVGASGLVLGVIGLLLLEVP 120

Query: 252 A--FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVI 309
              FDESN SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPL+ I
Sbjct: 121 TLTFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLLAI 180

Query: 310 SVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPM 369
           SVLNHDP +  S+K+LT+SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPM
Sbjct: 181 SVLNHDPAFNLSLKDLTASDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPM 240

Query: 370 FASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 406
           FASIFGFLYLGETFSPLQL GA VTVVAIY+VN+R S
Sbjct: 241 FASIFGFLYLGETFSPLQLAGAIVTVVAIYMVNYRNS 277

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116786937|gb|ABK24307.1| unknown [Picea sitchensis]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/377 (63%), Positives = 283/377 (75%), Gaps = 34/377 (9%)

Query: 64  TTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVM------------- 110
           TT     M  S  +DC++ G DVEC++ PT  EE      + + + +             
Sbjct: 84  TTHKIPEMGPSVEMDCIDNGLDVECVV-PTTAEEANGRPTDAEDEKLLPNSFSFDMTEKQ 142

Query: 111 ELGMLL----EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ 166
           E+G LL    +  VL+SPFFFWG++MVAMKEVLPK G  FVAA RLIP+GLLLI+FA   
Sbjct: 143 EMGGLLNAIRDTLVLISPFFFWGSSMVAMKEVLPKTGPLFVAAVRLIPSGLLLISFAHYS 202

Query: 167 GRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLF 226
           G+K PSG  AW+S+ LF LVDA CFQGFLA+GL RTSAGLGSVIIDSQPL+VAVLAA+ +
Sbjct: 203 GKKQPSGLMAWLSVALFGLVDAGCFQGFLAEGLTRTSAGLGSVIIDSQPLTVAVLAAIFY 262

Query: 227 GESIGLVGAGGLVLGVIGLLLLEAPAF----------------DESNSSLWGSGEWWMLL 270
           GESIG +GA GLVLGVIGLLLLE PAF                 +S S+LWGSGEWWMLL
Sbjct: 263 GESIGTIGAAGLVLGVIGLLLLEVPAFYGNDISETVVSQSEVVQKSISTLWGSGEWWMLL 322

Query: 271 AAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDI 330
           AAQSMAVGTVMVRWV KYSDPVMATGWHM+IGGLPL+V+SV+ HDP +  S++EL   D 
Sbjct: 323 AAQSMAVGTVMVRWVCKYSDPVMATGWHMIIGGLPLLVLSVIKHDPAFTGSLQELDYGDW 382

Query: 331 LALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVG 390
           LAL+YTSIFGSAISYGVYFY+AT+GSLTKLSSLTFLTPMFASIFG+  L ETFSP+QL+G
Sbjct: 383 LALIYTSIFGSAISYGVYFYNATRGSLTKLSSLTFLTPMFASIFGYFLLDETFSPIQLLG 442

Query: 391 AAVTVVAIYLVNFRGSV 407
           A VTV+AIY+VN R +V
Sbjct: 443 ALVTVIAIYMVNTRNNV 459

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	407
TAIR|locus:2076954	417	AT3G02690 [Arabidopsis thalian	0.830	0.810	0.652	2.8e-114
UNIPROTKB|Q3Z7M8	287	DET1056 "Membrane protein, put	0.675	0.958	0.255	3.3e-18
TIGR_CMR|DET_1056	287	DET_1056 "membrane protein, pu	0.675	0.958	0.255	3.3e-18
TIGR_CMR|SPO_3584	306	SPO_3584 "membrane protein, dr	0.299	0.398	0.297	2.2e-14
UNIPROTKB|Q3AAZ7	303	CHY_1867 "Putative membrane pr	0.616	0.828	0.247	1.9e-12
TIGR_CMR|CHY_1867	303	CHY_1867 "putative membrane pr	0.616	0.828	0.247	1.9e-12
TIGR_CMR|BA_0829	303	BA_0829 "transporter, EamA fam	0.675	0.907	0.212	7.3e-11
UNIPROTKB|P0AA70	306	yedA "putative membrane transp	0.683	0.908	0.242	2.3e-10
TIGR_CMR|BA_3061	303	BA_3061 "transporter, EamA fam	0.692	0.930	0.222	4.4e-09
UNIPROTKB|Q5LM21	292	SPO3743 "Membrane protein, put	0.253	0.352	0.262	7.1e-09

TAIR|locus:2076954 AT3G02690 [Arabidopsis thaliana (taxid:3702)]

 Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
 Identities = 225/345 (65%), Positives = 259/345 (75%)

Query:    61 TNCTTTNKKNMESSSTVDCVETGTDVECLISPTDKEEIEQEQVEQDGQVMELGMLLEWAV 120
             +N +T   ++  SSS+VDCV  G+DVEC+ +  D EE     +   G+    G  LEW V
Sbjct:    73 SNNSTEETESSSSSSSVDCVGMGSDVECVNNGED-EENRSSGILSGGE----GTFLEWTV 127

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L+SPFFFWGTAMVAMKEVLP  G FFVAAFRLIPAGLLL+ FA  +GR LP G NAW SI
Sbjct:   128 LISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSI 187

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
              LFALVDA+CFQGFLAQGLQRTSAGLGSVIIDSQPL+VAVLA+ LFGES           
Sbjct:   188 ALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLL 247

Query:   241 XXXXXXXXEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
                     E P+   D +N SLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDP+MATGWH
Sbjct:   248 GVAGLLLLEVPSVTSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWH 307

Query:   299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXX 358
             MVIGGLPL+ ISV+NHDPV+  S+++L+++D++ALLYTSIFGSA+SYGVYFY        
Sbjct:   308 MVIGGLPLLAISVINHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLT 367

Query:   359 XXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 403
                      PMFASIFG+LYL ETFS LQLVGAAVT+VAIYLVNF
Sbjct:   368 KLSSLTFLTPMFASIFGYLYLNETFSSLQLVGAAVTLVAIYLVNF 412

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

UNIPROTKB|Q3Z7M8 DET1056 "Membrane protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 221 (82.9 bits), Expect = 3.3e-18, P = 3.3e-18
 Identities = 73/286 (25%), Positives = 121/286 (42%)

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L+    FW +A  A++  L       +A  R + A L L+ +A     +LP   +   +I
Sbjct:     9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
             FL  L+  S +   L  G +  +AG  S+II S P+   +LA   + +            
Sbjct:    68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127

Query:   241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
                           E  +  +    +W+LLAA   ++  V  R  + KYS    +T  + 
Sbjct:   128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182

Query:   300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXX 359
             +  G  L+++      P   + + E  +S  LA++Y  IF +AISY +Y Y         
Sbjct:   183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQ 238

Query:   360 XXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 405
                     P+FA    FL+LGE  +P+ L+G  + +  + LVN  G
Sbjct:   239 VISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|DET_1056 DET_1056 "membrane protein, putative" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 221 (82.9 bits), Expect = 3.3e-18, P = 3.3e-18
 Identities = 73/286 (25%), Positives = 121/286 (42%)

Query:   121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSI 180
             L+    FW +A  A++  L       +A  R + A L L+ +A     +LP   +   +I
Sbjct:     9 LIFTILFWSSAFAAIRVSLADYSPSHLALLRFLVASLALVIYALITRMRLPDKRDL-PAI 67

Query:   181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXX 240
             FL  L+  S +   L  G +  +AG  S+II S P+   +LA   + +            
Sbjct:    68 FLLGLIGISLYHFALNYGEKTVTAGAASLIIASAPIFSVLLARFFYKDKLTPAGWLGILL 127

Query:   241 XXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSDPVMATGWHM 299
                           E  +  +    +W+LLAA   ++  V  R  + KYS    +T  + 
Sbjct:   128 SFGGIAVI---TLGEGQTLSFEPHAFWVLLAALFTSIYIVFQRPLLKKYSGFEFST--YA 182

Query:   300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXX 359
             +  G  L+++      P   + + E  +S  LA++Y  IF +AISY +Y Y         
Sbjct:   183 IWAGTLLLMVGA----PGLLKEISEAPASSTLAVVYLGIFPTAISYLLYSYALSKARISQ 238

Query:   360 XXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 405
                     P+FA    FL+LGE  +P+ L+G  + +  + LVN  G
Sbjct:   239 VISFLYLNPVFAIGIAFLWLGEIPAPISLLGGLLALAGVILVNRYG 284

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|SPO_3584 SPO_3584 "membrane protein, drug/metabolite transporter (DMT) family" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 137 (53.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
 Identities = 39/131 (29%), Positives = 66/131 (50%)

Query:   272 AQSMAVGTVMVR-WVSKYSDPVMA-TGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSD 329
             A SMAVG V+ R W  +   P++  T W +  GGL L+ ++ L      G     L+ ++
Sbjct:   156 ALSMAVGVVLTRKW--RPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPG-----LSLTN 208

Query:   330 ILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLV 389
             + AL +  + G A++Y ++F                  P+ A I G+L LGE  SP+Q +
Sbjct:   209 LAALAWLGLIGGALTYILWFRGLARIEPAAVSLLGILSPLTAVILGWLALGEALSPVQGL 268

Query:   390 GAAVTVVAIYL 400
             GA + + A+++
Sbjct:   269 GAVIVLGAVWI 279

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q3AAZ7 CHY_1867 "Putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 65/263 (24%), Positives = 110/263 (41%)

Query:   145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
             FF   F L+P  L  I     +  KL +G + ++  FL  L++      FL  G+  T A
Sbjct:    39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93

Query:   205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
              L + I  S PL V + A L+  E                         +   S ++G  
Sbjct:    94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152

Query:   265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
                ++LAA +  + TV+ +  S+ +D V+   +  ++G + L+ I +L H P++      
Sbjct:   153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206

Query:   325 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 384
             L    IL + Y + F + ++Y  YF                  P+ AS F +  LGE  +
Sbjct:   207 LQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKIT 266

Query:   385 PLQLVGAAVTVVAIYLVNFRGSV 407
                + G  V ++ IY+V + G V
Sbjct:   267 FEFIAGTMVILLGIYIVQWAGQV 289

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1867 CHY_1867 "putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 186 (70.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 65/263 (24%), Positives = 110/263 (41%)

Query:   145 FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA 204
             FF   F L+P  L  I     +  KL +G + ++  FL  L++      FL  G+  T A
Sbjct:    39 FFFGGFVLLPVALSNI---KRKNVKL-TGSD-FLFAFLIGLLNVVLSMSFLQIGINMTKA 93

Query:   205 GLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSG 264
              L + I  S PL V + A L+  E                         +   S ++G  
Sbjct:    94 SLAAAIFSSNPLFVVLFAYLILDEKLNFQKILGLFIGIVGVVIVFYKDLELGISHVYGI- 152

Query:   265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE 324
                ++LAA +  + TV+ +  S+ +D V+   +  ++G + L+ I +L H P++      
Sbjct:   153 -LMLILAAVTYGLYTVLGKRFSQKTDSVIMNSFSFILGSVFLLPIILLKHYPLFS----- 206

Query:   325 LTSSDILALLYTSIFGSAISYGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFS 384
             L    IL + Y + F + ++Y  YF                  P+ AS F +  LGE  +
Sbjct:   207 LQPKAILPMAYLTFFVTGLAYYTYFLGLTNISAGNGSMVFFIKPVLASFFAWAILGEKIT 266

Query:   385 PLQLVGAAVTVVAIYLVNFRGSV 407
                + G  V ++ IY+V + G V
Sbjct:   267 FEFIAGTMVILLGIYIVQWAGQV 289

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TIGR_CMR|BA_0829 BA_0829 "transporter, EamA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 173 (66.0 bits), Expect = 7.3e-11, P = 7.3e-11
 Identities = 60/282 (21%), Positives = 114/282 (40%)

Query:   120 VLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVS 179
             +L+     WG   V  K ++  A    + + R I A + L+     + +K+     A + 
Sbjct:     8 LLLLTSLLWGGNFVVGKSLVDHASPMTLTSLRWIIAIVCLLPMVWFKEKKIIPPRAAILP 67

Query:   180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESXXXXXXXXXX 239
             + L  +   + F  F    L++TSA    +I     +S+A+ + L   E           
Sbjct:    68 LILMGISGVALFNIFQFLALEKTSATNVGLISTLNAISIALFSVLFLKEKVNTLQILSMI 127

Query:   240 XXXXXXXXXEAPA-FDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWH 298
                           F    S  + SG+ WM+ A     + +V  +W +K + P+MAT + 
Sbjct:   128 LSFFGVILVLLKGNFALLFSLHFNSGDLWMIAAVCIWGIYSVCSKWATKTTTPLMATLYS 187

Query:   299 MVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYXXXXXXXX 358
              + G + L+  ++ +       +V  + +S I +LLYT +  + +    +          
Sbjct:   188 GIFGVILLLPFNIGSF------TVTNINTSFITSLLYTGLISTVLCMVFWNIGVQKLGAT 241

Query:   359 XXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 400
                      P+F +I  FL+LGE  + +Q+VG  + +   YL
Sbjct:   242 TSGIFLNFNPIFTAILAFLFLGEELTWIQIVGTMIVMTGCYL 283

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

UNIPROTKB|P0AA70 yedA "putative membrane transport protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 169 (64.5 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 72/297 (24%), Positives = 121/297 (40%)

Query:   110 MELGMLLE-WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR 168
             M    LL  +  L + +  WG+    ++  +       +A  R + AG+LL+ F   +G 
Sbjct:     1 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH 60

Query:   169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGL-QRTSAGLGSVIIDSQPLSVAVLAALLFG 227
             KLP      ++  L  L+  +   G +     Q   +G+ +V++ + PL     + L FG
Sbjct:    61 KLPP-LRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FG 118

Query:   228 ESXXXXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
                                   +      N   WG+    +L+ + S A G+V   + S+
Sbjct:   119 IKTRKLEWVGIAIGLAGIIMLNSGGNLSGNP--WGA--ILILIGSISWAFGSV---YGSR 171

Query:   288 YSDPV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTS-SDILALLYTSIFGSAIS 344
              + PV  MA    M+  G+ LM+ S+     + GE +  L S S  LA+ Y ++FGS I+
Sbjct:   172 ITLPVGMMAGAIEMLAAGVVLMIASM-----IAGEKLTALPSLSGFLAVGYLALFGSIIA 226

Query:   345 YGVYFYXXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 401
                Y Y                 P+ A + G    GET S ++ +   V V A+ LV
Sbjct:   227 INAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLV 283

GO:0055085 "transmembrane transport" evidence=IMP;RCA

GO:0022857 "transmembrane transporter activity" evidence=IMP;RCA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA;RCA

GO:0016020 "membrane" evidence=IEA

TIGR_CMR|BA_3061 BA_3061 "transporter, EamA family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 66/297 (22%), Positives = 119/297 (40%)

Query:   116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAG--LLLITFASSQGRKLPSG 173
             +EW +LVS    WG      K  +    +    + R + A   LLLITF   +  ++   
Sbjct:     6 MEW-LLVSVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLLITFLMERSLRIER- 63

Query:   174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE--SXX 231
                W+ +    +V  + +Q      ++ TSA   S++I   P+   +LA L   E  S  
Sbjct:    64 -KDWLRLVAVGIVGTTMYQTMFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMK 122

Query:   232 XXXXXXXXXXXXXXXXXEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVR-WVSKYSD 290
                                     +    W  G    L+AA +     ++ +  ++KYS 
Sbjct:   123 VQIGSIVAFIGAAFVLLTGHTGGATYEYAW-LGNIIGLVAAIAWGWYPILAQPLITKYS- 180

Query:   291 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 350
              +  T W  +IG +PL++  + N + +    V  L+     +L Y+ IF +     +++ 
Sbjct:   181 AMRVTSWSTLIGIVPLVIYCLFNVNSLTWP-VDTLSWG---SLAYSIIFATIFGLAMWYV 236

Query:   351 XXXXXXXXXXXXXXXXXPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGSV 407
                              P+FA IF  + +GE  + +QLVG  +  V +Y+V  +G +
Sbjct:   237 GISQIGSTKVMVYMYLVPLFAVIFAAVTIGEQINMMQLVGGLIIFVGLYVVK-KGGI 292

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

UNIPROTKB|Q5LM21 SPO3743 "Membrane protein, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 117 (46.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 27/103 (26%), Positives = 49/103 (47%)

Query:   126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFAL 185
             F W +A  + + ++  A   F  A R + +GLL +  A + G+      N W +  +F +
Sbjct:    14 FMWSSAFSSARIIVADASPLFSLACRFLISGLLGVIIARAMGQTWRLTRNQWKATIVFGI 73

Query:   186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGE 228
                + + G     +Q   A + ++I  + PL VA+ +  LFGE
Sbjct:    74 CQNALYLGLNFYAMQTVEASVAAIIASTMPLLVALASWGLFGE 116

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93V85	WTR16_ARATH	No assigned EC number	0.7659	0.7911	0.7721	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.3__210__AT3G02690.1 annotation not avaliable (424 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	407
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	5e-25
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	9e-25
PRK11272	292	PRK11272, PRK11272, putative DMT superfamily trans	5e-17
pfam00892	126	pfam00892, EamA, EamA-like transporter family	9e-17
pfam00892	126	pfam00892, EamA, EamA-like transporter family	9e-14
PRK11453	299	PRK11453, PRK11453, O-acetylserine/cysteine export	7e-11
COG2510	140	COG2510, COG2510, Predicted membrane protein [Func	0.001
COG5006	292	COG5006, rhtA, Threonine/homoserine efflux transpo	0.003

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score =  102 bits (256), Expect = 5e-25
 Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 16/272 (5%)

Query: 128 WGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVD 187
           WGT  V + + L      + A FR +   LLL+        +        + + L   + 
Sbjct: 1   WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPL----LRRRPPLKRLLRLLLLGALQ 56

Query: 188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL 247
              F       ++R   G  ++++   PL V +L+ L+  E    +     VLG+ G +L
Sbjct: 57  IGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVL 116

Query: 248 LEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMV-RWVSKYSDP-VMATGWHMVIGGLP 305
           L      + N S+  +G    L +  S A+GTV+  R V K     +  TGW +++G L 
Sbjct: 117 L----LSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALL 172

Query: 306 LMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTF 365
           L+  +             +  S    ALLY  + G+A++Y ++    T    +  S L  
Sbjct: 173 LLPFAWFL------GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL 226

Query: 366 LTPMFASIFGFLYLGETFSPLQLVGAAVTVVA 397
             P+ A + G L LGET S  QL+G A+ + A
Sbjct: 227 AEPLVALLLGLLILGETLSLPQLIGGALIIAA 258

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score =  102 bits (256), Expect = 9e-25
 Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 11/297 (3%)

Query: 110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAF-RLIPAGLLLITFASSQGR 168
           M+  +LL    L+     WG + +A+K  +     F  AA  R + A LLL+     + R
Sbjct: 1   MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPR 60

Query: 169 KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLF-G 227
            L      W+ + L AL+  +     L   L+ TSA + S+II   PL  A+LA LL  G
Sbjct: 61  GLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLG 120

Query: 228 ESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK 287
           E + L+   G++L + G+LL+          SL G      L AA   A+ T +V+ +S+
Sbjct: 121 ERLSLLQILGILLALAGVLLILLGGGGGGILSLLG--LLLALAAALLWALYTALVKRLSR 178

Query: 288 YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV 347
                +A    +++  L L++  +             + S   L LLY  +F + ++Y +
Sbjct: 179 LGPVTLALLLQLLLALLLLLLFFLSGFGAP-------ILSRAWLLLLYLGVFSTGLAYLL 231

Query: 348 YFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 404
           ++Y+      + ++ L+ L P+FA++ G L LGE  SP QL+GAA+ V+ + L + R
Sbjct: 232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288

Length = 292

>gnl|CDD|183067 PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional

 Score = 80.4 bits (199), Expect = 5e-17
 Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 24/294 (8%)

Query: 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGF 174
           L  +  L + +  WG+  + ++  +       +A  R + AG+LL+ F   +G  LP+  
Sbjct: 7   LPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPT-L 65

Query: 175 NAWVSIFLFALVDASCFQGF--LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGL 232
             W++  L  L+  +   G   +A+  Q   +G+ +V++ + PL   +  + LFG     
Sbjct: 66  RQWLNAALIGLLLLAVGNGMVTVAEH-QNVPSGIAAVVVATVPL-FTLCFSRLFGIRTRK 123

Query: 233 VGAGGLVLGVIGLLLLEAPAFDESNSSLWGS--GEWWMLLAAQSMAVGTVMVRWVSKYSD 290
           +   G+ +G+ G++LL       S  +L G+  G   +L+A+ S A G+V   W S+   
Sbjct: 124 LEWLGIAIGLAGIVLLN------SGGNLSGNPWGAILILIASASWAFGSV---WSSRLPL 174

Query: 291 PV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKEL-TSSDILALLYTSIFGSAISYGV 347
           PV  MA    M+  G+ L++ S+L+     GE +  L T S  LAL Y ++FGS I+   
Sbjct: 175 PVGMMAGAAEMLAAGVVLLIASLLS-----GERLTALPTLSGFLALGYLAVFGSIIAISA 229

Query: 348 YFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 401
           Y Y          +S  ++ P+ A + G    GET SP++ +   V V A+ LV
Sbjct: 230 YMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 75.7 bits (187), Expect = 9e-17
 Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 274 SMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILAL 333
           S A+  V  + + +   P+  T +  +I G+ L+++  L       +    L+   ILAL
Sbjct: 2   SWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFL-----LRKPFALLSLKAILAL 56

Query: 334 LYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAV 393
           LY  +FG+A+ Y +YFY+    S +  S +T L+P+F  I   L LGE  +  QL+G  +
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 394 TVVAIYLVNF 403
            ++ + L+  
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 67.3 bits (165), Expect = 9e-14
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 1/124 (0%)

Query: 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS-GFNAWVSIFLFA 184
             W    V  K++L +       A+R + AG+LLI       +        A +++    
Sbjct: 1   LSWALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLG 60

Query: 185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIG 244
           L   +         L+  SA   SVI    P+   +L+ LL GE + L    G+VL ++G
Sbjct: 61  LFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLG 120

Query: 245 LLLL 248
           +LL+
Sbjct: 121 VLLI 124

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|183142 PRK11453, PRK11453, O-acetylserine/cysteine export protein; Provisional

 Score = 62.5 bits (152), Expect = 7e-11
 Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 6/204 (2%)

Query: 204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGS 263
           AGL S+++ +Q     VL A  FGE +      G+ L + G+L+L   + +  + ++   
Sbjct: 86  AGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAM--L 143

Query: 264 GEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMA-TGWHMVIGGLPLMVISVLNHDP-VYG 319
           G    L AA S A G +  + +  +S    VM+   W  +I  +P  V S++        
Sbjct: 144 GFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI 203

Query: 320 ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYL 379
            S+  +  + IL+L+Y +   + + YG++     +    +++ L+ L P+       L L
Sbjct: 204 HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLL 263

Query: 380 GETFSPLQLVGAAVTVVAIYLVNF 403
            E  + LQ +GA + +  +Y+  F
Sbjct: 264 DERLTGLQFLGAVLIMAGLYINVF 287

Length = 299

>gnl|CDD|225308 COG2510, COG2510, Predicted membrane protein [Function unknown]

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 267 WMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELT 326
           + LL+A    +  +  +   +  DP  AT    ++  L  ++I +L    V G   +   
Sbjct: 7   YALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVI-LIFLLIVLL----VTGNW-QAGG 60

Query: 327 SSDILALLYTSIFG--SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFS 384
                + L+  + G    +S+ +YF +  KG  +++  L   + + A +   L+LGE  S
Sbjct: 61  EIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLS 120

Query: 385 PLQLVGAAVTVVAIYLVNFR 404
               +G  + V+   LV+ R
Sbjct: 121 LPTWIGIVLIVIGAILVSLR 140

Length = 140

>gnl|CDD|227339 COG5006, rhtA, Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 22/281 (7%)

Query: 119 AVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWV 178
           A+LV+       A  A K + P  G   V A RL  A L+L+       R+L       +
Sbjct: 16  ALLVAMVSIQSGASFA-KSLFPLVGAAGVTALRLAIAALILLALFRPWRRRLSK--PQRL 72

Query: 179 SIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAA--LLFGESIGLVGAG 236
           ++  + +        F    ++R   G+   I  + PL+VA+L++  L     + L   G
Sbjct: 73  ALLAYGVSLGGMNLLFYL-SIERIPLGIAVAIEFTGPLAVALLSSRRLRDFVWVALAVLG 131

Query: 237 GLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATG 296
             +L  +G          +S  SL   G    L A    A+  V+ +   +         
Sbjct: 132 IWLLLPLG----------QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVA 181

Query: 297 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS 356
             M++  L ++ I      P         + S +   L  ++  SA+ Y +   +  +  
Sbjct: 182 VGMLVAALIVLPIGAAQAGPAL------FSPSLLPLALGVAVLSSALPYSLEMIALRRLP 235

Query: 357 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVA 397
                +L  L P  A++ G ++LGET + +Q +  A  + A
Sbjct: 236 ARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAA 276

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	407
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.98
PRK15430	296	putative chloramphenical resistance permease RarD;	99.98
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.96
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.95
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.92
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.91
COG2962	293	RarD Predicted permeases [General function predict	99.9
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.87
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
KOG2765	416	consensus Predicted membrane protein [Function unk	99.82
KOG2766	336	consensus Predicted membrane protein [Function unk	99.72
COG2510	140	Predicted membrane protein [Function unknown]	99.67
COG2510	140	Predicted membrane protein [Function unknown]	99.59
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.59
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.56
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.54
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.54
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.52
KOG1580	337	consensus UDP-galactose transporter related protei	99.52
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.47
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.47
KOG1581	327	consensus UDP-galactose transporter related protei	99.43
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.36
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.35
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.28
PRK13499	345	rhamnose-proton symporter; Provisional	99.28
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.27
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.26
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.22
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.19
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.19
PRK11272	292	putative DMT superfamily transporter inner membran	99.13
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.13
PRK15430	296	putative chloramphenical resistance permease RarD;	99.13
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.1
PRK11689	295	aromatic amino acid exporter; Provisional	99.07
PLN00411	358	nodulin MtN21 family protein; Provisional	99.06
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.98
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.91
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.91
KOG1582	367	consensus UDP-galactose transporter related protei	98.84
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.82
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.81
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.78
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.74
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.73
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.73
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.72
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.68
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.66
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.61
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.61
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.59
COG2962	293	RarD Predicted permeases [General function predict	98.57
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.49
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	98.1
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.09
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.06
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.97
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.95
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.9
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.79
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.78
COG2076	106	EmrE Membrane transporters of cations and cationic	97.76
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.73
COG2076	106	EmrE Membrane transporters of cations and cationic	97.73
PRK11431	105	multidrug efflux system protein; Provisional	97.73
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.72
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.69
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.68
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.66
PRK11431	105	multidrug efflux system protein; Provisional	97.6
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.51
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.34
PRK13499	345	rhamnose-proton symporter; Provisional	97.32
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.3
KOG2765	416	consensus Predicted membrane protein [Function unk	97.19
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.09
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.9
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.75
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.75
KOG1581	327	consensus UDP-galactose transporter related protei	96.69
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.62
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.62
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.41
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.14
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.96
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.73
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.62
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.43
KOG1580	337	consensus UDP-galactose transporter related protei	93.77
KOG4831	125	consensus Unnamed protein [Function unknown]	93.39
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.23
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.11
KOG2922	335	consensus Uncharacterized conserved protein [Funct	92.87
PRK02237	109	hypothetical protein; Provisional	92.56
PRK02237	109	hypothetical protein; Provisional	91.11
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	90.87
KOG3912	372	consensus Predicted integral membrane protein [Gen	90.53
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.07
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	90.02
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	89.46
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	89.2
KOG1582	367	consensus UDP-galactose transporter related protei	89.07
TIGR02865	764	spore_II_E stage II sporulation protein E. Stage I	84.18

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=5.5e-32  Score=258.19  Aligned_cols=290  Identities=15%  Similarity=0.174  Sum_probs=235.6

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhcc-CcCHHHHHHHHHHHHHHHHHHHHHHhCC-C-CC-CChhhHHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGR-K-LP-SGFNAWVSIFLFALVDAS  189 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~-~~~p~~~~~~r~~~~~l~~~~~~~~~~~-~-~~-~~~~~~~~~~~~g~~~~~  189 (407)
                      +.+.++.++...+.++...++.|.+.+ +++|..+.++|+.++.++++++.+.+++ + .+ ..++++.++.+.|+++ .
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~   89 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-S   89 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-H
Confidence            456788999999999999999999887 5999999999999999999998876543 2 22 2467778888888887 5


Q ss_pred             HHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHH------cCCcchHHHHHHHHHHHHHHHHhhcCCCC---------
Q 015427          190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALL------FGESIGLVGAGGLVLGVIGLLLLEAPAFD---------  254 (407)
Q Consensus       190 ~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~------l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~---------  254 (407)
                      ..+.+++.++++++++.++++.++.|+++.++++++      +|||+++.+++|++++++|+.++..++..         
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            577789999999999999999999999999999999      69999999999999999999998753211         


Q ss_pred             -----------CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhcccCChH-HHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 015427          255 -----------ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV-MATGWHMVIGGLPLMVISVLNHDPVYGESV  322 (407)
Q Consensus       255 -----------~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (407)
                                 .........|+.+.++++++|++|+++.|+..++.++. ..+++.+.++.+...+.....++.......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~  249 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI  249 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence                       01112234699999999999999999999987777554 566677777777666666655432211111


Q ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          323 KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       323 ~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      ..++.. ...++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+++..
T Consensus       250 ~~~~~~-~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        250 IHFDIT-LITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             eccchH-HHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            233433 3447777765 67899999999999999999999999999999999999999999999999999999999988


Q ss_pred             ccCC
Q 015427          403 FRGS  406 (407)
Q Consensus       403 ~~~~  406 (407)
                      +.++
T Consensus       328 ~~~~  331 (358)
T PLN00411        328 WGKA  331 (358)
T ss_pred             hhhh
Confidence            7553

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=1.5e-31  Score=251.14  Aligned_cols=278  Identities=25%  Similarity=0.403  Sum_probs=236.3

Q ss_pred             HHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 015427          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ  197 (407)
Q Consensus       118 ~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  197 (407)
                      .+.++...++||.+.++.|...++++|.+++++|+.++.++++++...++++ .++++++......|.++...++.++++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~   88 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHP-LPTLRQWLNAALIGLLLLAVGNGMVTV   88 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556888999999999999999999999999999999999998887765544 334577778888888776667788899


Q ss_pred             Hh-hccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHH
Q 015427          198 GL-QRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA  276 (407)
Q Consensus       198 al-~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a  276 (407)
                      +. ++++++.++++.++.|+++.+++.+ +|||+++++++|++++++|+.++..++. .   +....|++++++++++|+
T Consensus        89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-~---~~~~~G~l~~l~a~~~~a  163 (292)
T PRK11272         89 AEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-L---SGNPWGAILILIASASWA  163 (292)
T ss_pred             HHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-c---ccchHHHHHHHHHHHHHH
Confidence            99 9999999999999999999999975 6999999999999999999999875431 1   123469999999999999


Q ss_pred             HHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015427          277 VGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS  356 (407)
Q Consensus       277 ~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~  356 (407)
                      .+.+..|+..++ ++.....+...++.++..+.....+.+.    ....+...|..+++++++++++++.+|++++++.+
T Consensus       164 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~  238 (292)
T PRK11272        164 FGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVR  238 (292)
T ss_pred             HHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999998654 3455667788888887777766544321    11235678889999999999999999999999999


Q ss_pred             hhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          357 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       357 ~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      +++++.+.+++|+++++++++++||++++.+++|+++++.|+++.++.++
T Consensus       239 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        239 PALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999876543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=9.9e-32  Score=252.59  Aligned_cols=277  Identities=17%  Similarity=0.133  Sum_probs=218.8

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (407)
                      .+++++++++.++||.+++..|...+++||..+.++|+.++.+++.++..  +++   .++.+++.++.+.+...+++.+
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~--~~~---~~~~~~~~~~~~~l~~~~~~~~   77 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG--FPR---LRQFPKRYLLAGGLLFVSYEIC   77 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc--ccc---cccccHHHHHHHhHHHHHHHHH
Confidence            34677889999999999999999999999999999999999998887631  111   1122333445556566667777


Q ss_pred             HHHHhhc----cchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCC------CcchhhhH
Q 015427          195 LAQGLQR----TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDES------NSSLWGSG  264 (407)
Q Consensus       195 ~~~al~~----~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~------~~~~~~~G  264 (407)
                      ++.++++    ++++.++++.++.|+++.+++++++|||+++.+++|++++++|+.++..++.+.+      +......|
T Consensus        78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G  157 (295)
T PRK11689         78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS  157 (295)
T ss_pred             HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence            7777754    6788889999999999999999999999999999999999999999987642111      11122469


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 015427          265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS  344 (407)
Q Consensus       265 ~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  344 (407)
                      ++++++++++|++|.++.|+..++.++.....   ..+.+...+.....+.+.     ...+...|..+++.+ ++++++
T Consensus       158 ~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~-~~t~~~  228 (295)
T PRK11689        158 YGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAA-AAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHH-HHHHHH
Confidence            99999999999999999999987777765422   223333333333332221     235667788888877 579999


Q ss_pred             HHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          345 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       345 ~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      |.+|++++|+.++.+++.+.+++|+++++++++++||+++..+++|+++|+.|+++....+
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            9999999999999999999999999999999999999999999999999999997765543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=6.6e-31  Score=247.55  Aligned_cols=278  Identities=22%  Similarity=0.336  Sum_probs=220.1

Q ss_pred             HHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 015427          119 AVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQG  198 (407)
Q Consensus       119 l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a  198 (407)
                      ++.++++++||.++++.|...++++|..+.++|+.++.+.++++..  +++  .   .+...+..|.......+.+++.+
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~--~~~--~---~~~~~~~~g~~~~~~~~~~~~~~   79 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVA--RPK--V---PLNLLLGYGLTISFGQFAFLFCA   79 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc--CCC--C---chHHHHHHHHHHHHHHHHHHHHH
Confidence            4578889999999999999999999999999999998877665542  111  1   12234444554444455677889


Q ss_pred             hhc-cchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHHH
Q 015427          199 LQR-TSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAV  277 (407)
Q Consensus       199 l~~-~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a~  277 (407)
                      +++ .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++.+.  ......|++++++++++|++
T Consensus        80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~--~~~~~~G~~l~l~aal~~a~  157 (299)
T PRK11453         80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG--QHVAMLGFMLTLAAAFSWAC  157 (299)
T ss_pred             HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC--cchhHHHHHHHHHHHHHHHH
Confidence            988 588999999999999999999999999999999999999999999998654222  12223699999999999999


Q ss_pred             HHHHHHhhcccCCh---HHHHHHHHHHHHHHHHHHHHHhcCCCc-ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015427          278 GTVMVRWVSKYSDP---VMATGWHMVIGGLPLMVISVLNHDPVY-GESVKELTSSDILALLYTSIFGSAISYGVYFYSAT  353 (407)
Q Consensus       278 ~~v~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~  353 (407)
                      |.++.|+..++.+.   .....+.+..+.+.........+++.. ...+...+...|..++++++++++++|.+|+++++
T Consensus       158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~  237 (299)
T PRK11453        158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG  237 (299)
T ss_pred             HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999997654432   233444455554444444444443221 11223457788999999999999999999999999


Q ss_pred             cCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          354 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       354 ~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+.+
T Consensus       238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            9999999999999999999999999999999999999999999999876544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=3.8e-30  Score=241.61  Aligned_cols=274  Identities=19%  Similarity=0.195  Sum_probs=225.9

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG  193 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (407)
                      +.+++.+++++.++|+.++.+.|...+++||..+.++|+.++.++++++...+++  +.++++++..+..|++. ...+.
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~~~~~~~~~~~~~g~~~-~~~~~   86 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRL--RFAKEQRLPLLFYGVSL-GGMNY   86 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhc--cCCHHHHHHHHHHHHHH-HHHHH
Confidence            4678999999999999999999999999999999999999999998877644332  33457777787888765 44677


Q ss_pred             HHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHH
Q 015427          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQ  273 (407)
Q Consensus       194 ~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~  273 (407)
                      ++++++++++++.++++.++.|+++.+++.    |++..  ..++.++++|+.++..++.+.++  ....|+++++++++
T Consensus        87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~--~~~~G~ll~l~aa~  158 (293)
T PRK10532         87 LFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSH--VDLTGAALALGAGA  158 (293)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCccc--CChHHHHHHHHHHH
Confidence            899999999999999999999999998873    66554  45567889999988754422222  22469999999999


Q ss_pred             HHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015427          274 SMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSAT  353 (407)
Q Consensus       274 ~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~  353 (407)
                      +|+.|.+..|+..++.++... .+..++++++..+.....+..      ...+...|..++++|+++++++|.+|+++++
T Consensus       159 ~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~  231 (293)
T PRK10532        159 CWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPYSLEMIALT  231 (293)
T ss_pred             HHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999888887765 455666666666666543321      1245566777789999999999999999999


Q ss_pred             cCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          354 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       354 ~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +.++.+++++.++||+++.+++++++||+++..+++|+++|++|++...+.+
T Consensus       232 ~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        232 RLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             hcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999886554

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=4.8e-30  Score=237.32  Aligned_cols=256  Identities=27%  Similarity=0.388  Sum_probs=222.1

Q ss_pred             HHhHHHHHHhhcc-CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhh
Q 015427          128 WGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL  206 (407)
Q Consensus       128 ~~~~~~~~k~~~~-~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~  206 (407)
                      ||.+++..|...+ ..|+....+.|+..+.+++.++...+     ++++++.+.+..+.++..+++.++++|+++++++.
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~   75 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE   75 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence            7899999999876 57899999999999999888776543     34467778888888888889999999999999999


Q ss_pred             HHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 015427          207 GSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVS  286 (407)
Q Consensus       207 a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~  286 (407)
                      ++++.++.|+++.+++.+++|||+++++++|++++++|+.++..++ +   .+....|+.++++++++|+.+.++.|+..
T Consensus        76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-~---~~~~~~G~~~~l~a~~~~a~~~~~~k~~~  151 (260)
T TIGR00950        76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-N---LSINPAGLLLGLGSGISFALGTVLYKRLV  151 (260)
T ss_pred             hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-c---ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999987654 1   12235799999999999999999999998


Q ss_pred             ccCChH--HHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhh
Q 015427          287 KYSDPV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT  364 (407)
Q Consensus       287 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~  364 (407)
                      ++.++.  ....+.+.++.++..+.....++..      ..+...|..+++.++++++++|.+|++++++.++.+++.+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~  225 (260)
T TIGR00950       152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA  225 (260)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence            777744  4444667788888777776654332      23567788899999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 015427          365 FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAI  398 (407)
Q Consensus       365 ~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~  398 (407)
                      +++|+++++++++++||++++.+++|+++++.|+
T Consensus       226 ~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999986

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.98  E-value=1.3e-29  Score=242.89  Aligned_cols=285  Identities=13%  Similarity=0.096  Sum_probs=225.6

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCC-C--ChhhHHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLP-S--GFNAWVSIFLFALVDAS  189 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~-~--~~~~~~~~~~~g~~~~~  189 (407)
                      +.+..++.+....+-......+|.+++.+| |+.++.+|++++.+++.+++....++.+ .  .+++++.++..|+++..
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~  126 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF  126 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            455666666666666777788899999999 9999999999998877666543322222 2  23467788888888766


Q ss_pred             HHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHH
Q 015427          190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWML  269 (407)
Q Consensus       190 ~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l  269 (407)
                      . +...+.|+++++++.++++++++|+++++++++++|||+++.++++++++++|++++...+.     +....|+++++
T Consensus       127 ~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-----~~~~~G~~~~l  200 (350)
T PTZ00343        127 V-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-----HFTWLAFWCAM  200 (350)
T ss_pred             H-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-----hhHHHHHHHHH
Confidence            4 55678999999999999999999999999999999999999999999999999999886432     22347999999


Q ss_pred             HHHHHHHHHHHHHHhhccc-------CChHHHHHHHHHHHHHHHHHHHHHhcCCCccccc----ccCCHHHHHHHHHHHH
Q 015427          270 LAAQSMAVGTVMVRWVSKY-------SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESV----KELTSSDILALLYTSI  338 (407)
Q Consensus       270 ~sa~~~a~~~v~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~g~  338 (407)
                      ++++++++++++.|+..++       .++.....+..+.++++++|...+.+.......+    ...+...+..+++ .+
T Consensus       201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i  279 (350)
T PTZ00343        201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KI  279 (350)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HH
Confidence            9999999999999997764       3465666667889999999888765543211000    0111112222333 35


Q ss_pred             HHHHHHHHHHHH----HhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          339 FGSAISYGVYFY----SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       339 ~~~~~~~~l~~~----al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +.+++.+.+++.    ++++.+|.+.++.++++|+++++++++++||++++.+++|+++++.|+++|++.|
T Consensus       280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            667888888885    9999999999999999999999999999999999999999999999999998764

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.98  E-value=2.9e-29  Score=236.00  Aligned_cols=273  Identities=15%  Similarity=0.122  Sum_probs=207.0

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CChhhHHHHHHHHHHH
Q 015427          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP-----SGFNAWVSIFLFALVD  187 (407)
Q Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~  187 (407)
                      ++.+|.+++++++++||.+.++.|.. ++++|.++.++|+.++.+++.+++..+++...     .+++++ .....+.++
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   82 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVL   82 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHH
Confidence            34678999999999999999999985 67999999999999999888777655432211     122222 334466667


Q ss_pred             HHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHH
Q 015427          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWW  267 (407)
Q Consensus       188 ~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~  267 (407)
                      ...++.++++++++++++.++++.++.|+++.+++++++|||+++.+++|+++++.|+.++..++.   +.      .++
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---~~------~~~  153 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG---SL------PII  153 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---Cc------cHH
Confidence            777899999999999999999999999999999999999999999999999999999999875421   10      246


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCh--HHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHH
Q 015427          268 MLLAAQSMAVGTVMVRWVSKYSDP--VMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (407)
Q Consensus       268 ~l~sa~~~a~~~v~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  345 (407)
                      +++++++|+.|.+..|+..++...  .....+....+.....+.   ...+..  .....+...+..+++.+ +++.++|
T Consensus       154 ~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~g-~~t~i~~  227 (296)
T PRK15430        154 ALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTS--HMGQNPMSLNLLLIAAG-IVTTVPL  227 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcc--cccCCcHHHHHHHHHHH-HHHHHHH
Confidence            888999999999999997543322  222333333333222111   111110  01111222233344444 4688999


Q ss_pred             HHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          346 GVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       346 ~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      .+|++++++.++.+++++.+++|+++.+++++++||++++.+++|+++|+.|+.++.
T Consensus       228 ~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        228 LCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999988876654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=2.1e-28  Score=231.11  Aligned_cols=282  Identities=14%  Similarity=0.107  Sum_probs=221.5

Q ss_pred             HHHHHHHHHHHhHHHHHHhhccC-cCHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 015427          119 AVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASS-QGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (407)
Q Consensus       119 l~~~~~~~~~~~~~~~~k~~~~~-~~p~~~~~~r~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (407)
                      ++.+...++-....+.+|.+.++ .+|..++++|+.++.+.+.+.+.. .+++.+.++++++.++..|++. +..+.+.+
T Consensus         5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~   83 (302)
T TIGR00817         5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSN   83 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence            34445555555666788999988 559999999999998877666322 2233345678888899999985 66788999


Q ss_pred             HHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHH
Q 015427          197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA  276 (407)
Q Consensus       197 ~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a  276 (407)
                      +++++++++.++++.++.|+++++++++++|||+++.++++++++++|+++....+     .+....|++++++++++|+
T Consensus        84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-----~~~~~~G~~~~l~a~~~~a  158 (302)
T TIGR00817        84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-----LSFNWAGFLSAMISNITFV  158 (302)
T ss_pred             HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-----ccccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998765322     1223469999999999999


Q ss_pred             HHHHHHHhhcc--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCccc-cccc----CCH-HHHHHHHHHHHHHHHHHHHHH
Q 015427          277 VGTVMVRWVSK--YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGE-SVKE----LTS-SDILALLYTSIFGSAISYGVY  348 (407)
Q Consensus       277 ~~~v~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~-~~~~~ll~~g~~~~~~~~~l~  348 (407)
                      ++.++.|+..+  +.++.....+++..+++.+.|.....++..... .+..    ... ..+...+..++.+....+.++
T Consensus       159 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T TIGR00817       159 SRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVA  238 (302)
T ss_pred             HHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999887  789999999999999999999887765432110 0000    011 112112222222333333456


Q ss_pred             HHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          349 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       349 ~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      ++++++.+|.++++..+++|+++++++++++||+++..+++|++++++|++++++.|+
T Consensus       239 ~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       239 FMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            6899999999999999999999999999999999999999999999999999987653

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.96  E-value=2.6e-27  Score=221.21  Aligned_cols=272  Identities=18%  Similarity=0.227  Sum_probs=208.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 015427          118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRKLPSGFNAWVSIFLFALVDASCFQGFL  195 (407)
Q Consensus       118 ~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  195 (407)
                      .++.++++++|+..+...|...++.++.  .++++..+.+++.|+...+  +++.+..+++++..+..+.++...++.++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL   80 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            4567899999999999999666665553  4677777777777777654  23333334555556666666677788899


Q ss_pred             HHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHH
Q 015427          196 AQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSM  275 (407)
Q Consensus       196 ~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~  275 (407)
                      ++++++.+++.++++.++.|+++.+++++++|||+++.+++|+.++++|+.++..++.+.    ....|+.++++++++|
T Consensus        81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~----~~~~g~~~~l~aal~~  156 (281)
T TIGR03340        81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ----HRRKAYAWALAAALGT  156 (281)
T ss_pred             HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc----cchhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999988654221    1236888999999999


Q ss_pred             HHHHHHHHhhcccCChHH----HHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015427          276 AVGTVMVRWVSKYSDPVM----ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYS  351 (407)
Q Consensus       276 a~~~v~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~a  351 (407)
                      ++|.+..|+..++.++..    ...+.....++...+.....+...     .......+..+++.++++++++|.+|+++
T Consensus       157 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~l~~~l~~~a  231 (281)
T TIGR03340       157 AIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-----MFPYARQILPSATLGGLMIGGAYALVLWA  231 (281)
T ss_pred             HHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998765544322    222222222122222221112211     11223355667888889999999999999


Q ss_pred             hccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 015427          352 ATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL  400 (407)
Q Consensus       352 l~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l  400 (407)
                      +++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+++
T Consensus       232 l~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       232 MTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999999999976

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.96  E-value=7e-31  Score=227.94  Aligned_cols=282  Identities=16%  Similarity=0.156  Sum_probs=233.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (407)
                      .+|.+++.++.++-.++.+..|..  +.+|.+..-.|+++-.++..|...+.+...-.+...+.+++++|+.+.+ +..+
T Consensus        37 ~~gl~l~~vs~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~t-gvml  113 (346)
T KOG4510|consen   37 NLGLLLLTVSYFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFT-GVML  113 (346)
T ss_pred             ccCceehhhHHHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhh-HHHH
Confidence            456777777855555666555553  5778889999988888888887766655542233445567788888877 5558


Q ss_pred             HHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCC---------CCCcchhhhHH
Q 015427          195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD---------ESNSSLWGSGE  265 (407)
Q Consensus       195 ~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~---------~~~~~~~~~G~  265 (407)
                      .|||++|++.++|++|.+++|+|+.+++|+++|||+++.+.++..+.+.||+++.+|.+-         .........|.
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt  193 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT  193 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence            899999999999999999999999999999999999999999999999999999998731         11112345789


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHH
Q 015427          266 WWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (407)
Q Consensus       266 l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  345 (407)
                      ..++.++++.+-.+++.|+++|+.|......|+.+++.+..++.....+...     .+....+|+..+.+|++ +.+++
T Consensus       194 ~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~-----lP~cgkdr~l~~~lGvf-gfigQ  267 (346)
T KOG4510|consen  194 VAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQ-----LPHCGKDRWLFVNLGVF-GFIGQ  267 (346)
T ss_pred             HHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcccee-----cCccccceEEEEEehhh-hhHHH
Confidence            9999999999999999999999999998899999999998888776665432     35577888888889877 45677


Q ss_pred             HHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          346 GVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       346 ~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      .+.++++|++.+..++++.+++.+++.++++++||+.|+++.++|+++|+.+.++..+.|
T Consensus       268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            888999999999999999999999999999999999999999999999999998876544

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=2.8e-25  Score=204.86  Aligned_cols=246  Identities=13%  Similarity=0.035  Sum_probs=184.0

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCC------CC-CChhh-HHHHHHHHHHH
Q 015427          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK------LP-SGFNA-WVSIFLFALVD  187 (407)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~------~~-~~~~~-~~~~~~~g~~~  187 (407)
                      +|++++++++++||.+.++.|. .++++|.++.++|++++.+++++++..++++      .+ .++++ +....+.|++ 
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL-   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence            4788999999999999999998 4679999999999999998887776443321      11 11223 2334555554 


Q ss_pred             HHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHH
Q 015427          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWW  267 (407)
Q Consensus       188 ~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~  267 (407)
                      ..+++.++++|++++++++++++.++.|+++++++++++|||++++++++++++++|+.++..++.+  .       .++
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~--~-------~~~  150 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS--L-------PWE  150 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC--c-------hHH
Confidence            5668889999999999999999999999999999999999999999999999999999998764211  1       146


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHH
Q 015427          268 MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGV  347 (407)
Q Consensus       268 ~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l  347 (407)
                      +++++++|++|.+..|+..++ +....... .+.......+.....+.+..   ........|.++++.|++ +.++|.+
T Consensus       151 ~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g~~-t~i~~~l  224 (256)
T TIGR00688       151 ALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATV---QQTNPFPIWLLLVLAGLI-TGTPLLA  224 (256)
T ss_pred             HHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCcc---cccCchhHHHHHHHHHHH-HHHHHHH
Confidence            789999999999999998654 32222211 11222222212111121110   011122478888888865 8899999


Q ss_pred             HHHHhccCChhhHhhhhhhhHHHHHHHHHHH
Q 015427          348 YFYSATKGSLTKLSSLTFLTPMFASIFGFLY  378 (407)
Q Consensus       348 ~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~  378 (407)
                      +++++++.++++++++.|++|+++.+++.++
T Consensus       225 ~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       225 FVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=9.6e-25  Score=204.10  Aligned_cols=287  Identities=17%  Similarity=0.117  Sum_probs=230.9

Q ss_pred             HHHHHHH-HHHHHHHHhHHHHHHhhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCC---CCChhhHHHHHHHHHHHHH
Q 015427          115 LLEWAVL-VSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKL---PSGFNAWVSIFLFALVDAS  189 (407)
Q Consensus       115 ~~~~l~~-~~~~~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~  189 (407)
                      .+..++. +++.+.-+++.....+..++.+ |....++.+..-.++..++..+++.+.   +..+++|++.++.+++...
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~   91 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVE   91 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHH
Confidence            3344444 3444444444444444444555 888889999888888877766654432   2345788899999999877


Q ss_pred             HHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCC----CCcchhhhHH
Q 015427          190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDE----SNSSLWGSGE  265 (407)
Q Consensus       190 ~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~----~~~~~~~~G~  265 (407)
                       ++.+.+.|++|++++.++++..+..+++.+++++++|||+++.+++|+++|++|++++...|...    .+.++..+|+
T Consensus        92 -aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GD  170 (334)
T PF06027_consen   92 -ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGD  170 (334)
T ss_pred             -HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhH
Confidence             55599999999999999999999999999999999999999999999999999999998876222    1234567999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHH
Q 015427          266 WWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (407)
Q Consensus       266 l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  345 (407)
                      ++++++++.||+++++.++..++.+.....+...+++.++..+...+.+.....  ..+++...+..++..+ ++..+-|
T Consensus       171 ll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~--~~~w~~~~~~~~v~~~-~~lf~~y  247 (334)
T PF06027_consen  171 LLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIE--SIHWTSQVIGLLVGYA-LCLFLFY  247 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhh--ccCCChhhHHHHHHHH-HHHHHHH
Confidence            999999999999999999999999999999999999999999988887766542  2345555555444443 4566667


Q ss_pred             HHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          346 GVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       346 ~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      .+....+++.+|+...+-..+..+++++++++++|+++++..++|.++|+.|.++++..+
T Consensus       248 ~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  248 SLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            777888999999999999999999999999999999999999999999999999998754

Some of the sequences in this family are annotated as putative membrane proteins.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.95  E-value=4.3e-24  Score=200.32  Aligned_cols=283  Identities=29%  Similarity=0.427  Sum_probs=226.2

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccC-cCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~-~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      ...+....+...+.|+......|...++ .++....+.|...+.+...+....++.......+.+++..+.+.+.....+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence            3456677788889999999999998887 667777788999999885444443321122222235566777777778888


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHH-HHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHH
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAA-LLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLA  271 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~-l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~s  271 (407)
                      .+++.++++++++.++++.++.|+++.+++. +++|||+++.+++++++++.|+.++..++......  ...|+++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~--~~~g~~~~l~a  162 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL--SLLGLLLALAA  162 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--HHHHHHHHHHH
Confidence            9999999999999999999999999999997 77799999999999999999999999877433222  45899999999


Q ss_pred             HHHHHHHHHHHHhhcccCChHHHHH-HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 015427          272 AQSMAVGTVMVRWVSKYSDPVMATG-WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY  350 (407)
Q Consensus       272 a~~~a~~~v~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~  350 (407)
                      +++++++.+..|+.. +.++..... +...  ...............     .+.+...+..+.+.|++++++++.++++
T Consensus       163 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~i~~~~~~~  234 (292)
T COG0697         163 ALLWALYTALVKRLS-RLGPVTLALLLQLL--LALLLLLLFFLSGFG-----APILSRAWLLLLYLGVFSTGLAYLLWYY  234 (292)
T ss_pred             HHHHHHHHHHHHHhc-CCChHHHHHHHHHH--HHHHHHHHHHhcccc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999987 666666555 3333  112221111111110     2456778899999999999999999999


Q ss_pred             HhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          351 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       351 al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      ++++.++..++++.+++|++++++++++++|+++..+++|+++++.|+++..++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~  290 (292)
T COG0697         235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR  290 (292)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999987654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.92  E-value=3.5e-22  Score=172.99  Aligned_cols=268  Identities=21%  Similarity=0.235  Sum_probs=230.1

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (407)
                      .++.++.+++..-....+.|.+...+++...+.+|..++.+++++++...++  +..+++++.++.+|+.... .|.+||
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~--r~~~~~~~~~~~yGvsLg~-MNl~FY   89 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRR--RLSKPQRLALLAYGVSLGG-MNLLFY   89 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHh--ccChhhhHHHHHHHHHHHH-HHHHHH
Confidence            4667777777777777888999999999999999999999999988765543  4566889999999997655 677999


Q ss_pred             HHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHH
Q 015427          197 QGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMA  276 (407)
Q Consensus       197 ~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a  276 (407)
                      .+++++|.+.+..+-++.|+.+.+++      .-+..+.+.+.+++.|+.++.-.+.+.+  ..+..|..+++.++.+|+
T Consensus        90 ~si~riPlGiAVAiEF~GPL~vA~~~------sRr~~d~vwvaLAvlGi~lL~p~~~~~~--~lDp~Gv~~Al~AG~~Wa  161 (292)
T COG5006          90 LSIERIPLGIAVAIEFTGPLAVALLS------SRRLRDFVWVALAVLGIWLLLPLGQSVW--SLDPVGVALALGAGACWA  161 (292)
T ss_pred             HHHHhccchhhhhhhhccHHHHHHHh------ccchhhHHHHHHHHHHHHhheeccCCcC--cCCHHHHHHHHHHhHHHH
Confidence            99999999999999999999998877      4556677888888999988876542322  234489999999999999


Q ss_pred             HHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015427          277 VGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS  356 (407)
Q Consensus       277 ~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~  356 (407)
                      .|.+..||..+..+...-....+.+++++.+|+.....++.      -.++.....-+..+++.+++.|.+.+.++++.+
T Consensus       162 ~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~------l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp  235 (292)
T COG5006         162 LYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA------LFSPSLLPLALGVAVLSSALPYSLEMIALRRLP  235 (292)
T ss_pred             HHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchh------hcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence            99999999987778888889999999999999988766654      346677777888999999999999999999999


Q ss_pred             hhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Q 015427          357 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV  401 (407)
Q Consensus       357 ~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~  401 (407)
                      +..++++..+||.++.+.|++++||.++..||+|++.|+.+..-.
T Consensus       236 ~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         236 ARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             hhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999887633

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.91  E-value=1.3e-21  Score=182.89  Aligned_cols=272  Identities=16%  Similarity=0.128  Sum_probs=208.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (407)
                      ++++.++++++||+..+..|... +.++.+..  |..++.+++..+....+.+....++.+...++.|++ ...++.+++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~-w~ig~~~~~   77 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAF-WALGQINQF   77 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHH-HHhhhhhHH
Confidence            46788999999999999999865 67766654  787787777665554433222223444445555554 455778999


Q ss_pred             HHhhccchhhHHHHhh-cHHHHHHHHHHHHcCCcchHHH----HHHHHHHHHHHHHhhcCCCCCCC-c--chhhhHHHHH
Q 015427          197 QGLQRTSAGLGSVIID-SQPLSVAVLAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAFDESN-S--SLWGSGEWWM  268 (407)
Q Consensus       197 ~al~~~~~s~a~~i~~-~~p~~~~lla~l~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~-~--~~~~~G~l~~  268 (407)
                      .++++++++.+..+.. +.+++..+++.+++||+.++.+    ++|++++++|+.++...+.+... .  ....+|+.++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~  157 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLL  157 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHH
Confidence            9999999999999977 8899999999999999999999    99999999999998775422211 0  2235799999


Q ss_pred             HHHHHHHHHHHHHHHhhcccCChHHHHHHHHH----HHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 015427          269 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV----IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS  344 (407)
Q Consensus       269 l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  344 (407)
                      ++++++|+.|.+..|+..  .++....+.+..    .+.++..+.   ...       .+...+.++..+..|++ ..++
T Consensus       158 l~sg~~y~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~Gi~-~~ia  224 (290)
T TIGR00776       158 LMSTIGYLVYVVVAKAFG--VDGLSVLLPQAIGMVIGGIIFNLGH---ILA-------KPLKKYAILLNILPGLM-WGIG  224 (290)
T ss_pred             HHHHHHHHHHHHHHHHcC--CCcceehhHHHHHHHHHHHHHHHHH---hcc-------cchHHHHHHHHHHHHHH-HHHH
Confidence            999999999999999863  677776444444    333333222   111       11233344444447777 7999


Q ss_pred             HHHHHHHhc-cCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHH----HHHHHHHHHHHHhcccC
Q 015427          345 YGVYFYSAT-KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       345 ~~l~~~al~-~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~----iG~~lil~g~~l~~~~~  405 (407)
                      +.+|..+.+ +.++++.+++.+++|+.+.+++++++||+.++.++    +|.++++.|+.+....|
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK  290 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence            999999999 99999999999999999999999999999999999    99999999999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.90  E-value=1.4e-20  Score=167.74  Aligned_cols=274  Identities=16%  Similarity=0.133  Sum_probs=226.0

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChhhHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDA  188 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~  188 (407)
                      ..+|+++.+.+.++||......|. .+++|+.++...|.+.+..+++......++..     .++++.+....+.+.+ .
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKL-LEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence            467899999999999999999997 58999999999999999998887766654432     2344555555555554 5


Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHH
Q 015427          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWM  268 (407)
Q Consensus       189 ~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~  268 (407)
                      ..+...|.+|..+..+-+++.=.+..|++.++++++++|||+++.|++++.++.+||........+-         -..+
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~l---------pwva  153 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSL---------PWVA  153 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCC---------cHHH
Confidence            6699999999999999999999999999999999999999999999999999999999988753111         1357


Q ss_pred             HHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHH
Q 015427          269 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVY  348 (407)
Q Consensus       269 l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~  348 (407)
                      +.=+++|+.|...-|+..  .++.+-....++.-..+...+.+..+....  ...+.+...+..++..| ..|+++..++
T Consensus       154 l~la~sf~~Ygl~RK~~~--v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~~~~~~LLv~aG-~vTavpL~lf  228 (293)
T COG2962         154 LALALSFGLYGLLRKKLK--VDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNANSLWLLLVLAG-LVTAVPLLLF  228 (293)
T ss_pred             HHHHHHHHHHHHHHHhcC--CchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCCchHHHHHHHhh-HHHHHHHHHH
Confidence            777899999998877754  577777777777777777777776665431  11224555666667676 4588999999


Q ss_pred             HHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          349 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       349 ~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      ..+-++.+-++.+.++|.+|..-.+++++++||+++..+++..++|.+|.+++..
T Consensus       229 ~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         229 AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999988763

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.87  E-value=5.3e-22  Score=183.29  Aligned_cols=283  Identities=12%  Similarity=0.068  Sum_probs=225.9

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhcc--CcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCC--ChhhHHHHHHHHHHHHHH
Q 015427          116 LEWAVLVSPFFFWGTAMVAMKEVLP--KAG-TFFVAAFRLIPAGLLLITFASSQGRKLPS--GFNAWVSIFLFALVDASC  190 (407)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~~~k~~~~--~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~  190 (407)
                      ...+......++-......+|.+++  +.+ |..++.++...+.+.++.....+..+.++  ++..+..++..|++. ++
T Consensus        17 ~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~   95 (316)
T KOG1441|consen   17 RIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CI   95 (316)
T ss_pred             HHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HH
Confidence            3344444444455555566698888  666 99999999999999888887776655433  445677777777764 55


Q ss_pred             HHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHH
Q 015427          191 FQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLL  270 (407)
Q Consensus       191 ~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~  270 (407)
                      +..+.+.|+++.+++.+++++.++|++++++++++.+|+.+...++.+++...||.+.+..+.+     .+..|.+.++.
T Consensus        96 ~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~-----fn~~G~i~a~~  170 (316)
T KOG1441|consen   96 SHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELS-----FNLFGFISAMI  170 (316)
T ss_pred             HHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecccc-----ccHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999999999999999885533     34589999999


Q ss_pred             HHHHHHHHHHHHHhhcc----cCChHHHHHHHHHHHHHHHH-HHHHHhcCCCcc-cccccCCHHHHHHHHHHHHHHHHHH
Q 015427          271 AAQSMAVGTVMVRWVSK----YSDPVMATGWHMVIGGLPLM-VISVLNHDPVYG-ESVKELTSSDILALLYTSIFGSAIS  344 (407)
Q Consensus       271 sa~~~a~~~v~~r~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~g~~~~~~~  344 (407)
                      +.+.++.++++.|+..+    +.++.++..+..-++.+.++ |+....++.... .....++...+..++ .. ++....
T Consensus       171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s-v~~f~~  248 (316)
T KOG1441|consen  171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL-NS-VLAFLL  248 (316)
T ss_pred             HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH-HH-HHHHHH
Confidence            99999999999998763    46899999999999999888 877776665430 001133333333333 33 344444


Q ss_pred             HHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          345 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       345 ~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      +...+..+.+++|.+.++.+.++.++.++.++++|++++++.+.+|.++.++|+++|++.|.
T Consensus       249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~  310 (316)
T KOG1441|consen  249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL  310 (316)
T ss_pred             HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            55667889999999999999999999999999999999999999999999999999998764

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=1.1e-17  Score=157.91  Aligned_cols=261  Identities=18%  Similarity=0.153  Sum_probs=209.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHH
Q 015427          143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA  222 (407)
Q Consensus       143 ~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla  222 (407)
                      .|..+++.++....+...+.....+++ +.++..++..+..+++... +..+.+.|+++++...-.+++.+.|+.+++++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~  108 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFP-KSRKIPLKKYAILSFLFFL-ASVLSNAALKYISYPTQIVFKSSKPIPVMILG  108 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcccc-CCCcChHHHHHHHHHHHHH-HHHHHHHHHHhCChHHHHHHhhhHHHHHHHHH
Confidence            388999999999999888777666522 3333556667777776544 77799999999999999999999999999999


Q ss_pred             HHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcc-----hhhhHHHHHHHHHHHHHHHHHHHHhhcc--cCChHHHH
Q 015427          223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSS-----LWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMAT  295 (407)
Q Consensus       223 ~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~-----~~~~G~l~~l~sa~~~a~~~v~~r~~~~--~~~~~~~~  295 (407)
                      .+++|+|++..+++++++..+|+++....+.+.+..+     ....|+.+.+++.++.+...++.++..+  +.++.+..
T Consensus       109 ~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~m  188 (303)
T PF08449_consen  109 VLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELM  188 (303)
T ss_pred             HHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence            9999999999999999999999999988763222111     1224999999999999999999999765  45778899


Q ss_pred             HHHHHHHHHHHHHHHHH--hcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHH
Q 015427          296 GWHMVIGGLPLMVISVL--NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASI  373 (407)
Q Consensus       296 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i  373 (407)
                      ++..+.+.++..+..+.  .++...........+..+..++... ++..++....+...++.++...+++..+.-+.+++
T Consensus       189 fy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sil  267 (303)
T PF08449_consen  189 FYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSIL  267 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHH
Confidence            99999999988888777  3332211112223344455555454 55666677778889999999999999999999999


Q ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          374 FGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       374 ~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      +++++||+++++.+|+|.++++.|..++.+.|+
T Consensus       268 lS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~  300 (303)
T PF08449_consen  268 LSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK  300 (303)
T ss_pred             HHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence            999999999999999999999999999988664

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.82  E-value=6.6e-19  Score=160.96  Aligned_cols=294  Identities=16%  Similarity=0.108  Sum_probs=226.1

Q ss_pred             chhhHHHHHHHHHHHHHHHhHHHHHHhhccCcC---HHHHHHHHHHHHHHHHHHHH------HHh-CC------------
Q 015427          111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFA------SSQ-GR------------  168 (407)
Q Consensus       111 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~---p~~~~~~r~~~~~l~~~~~~------~~~-~~------------  168 (407)
                      ..+...|+.++++..++|-.+.-+++.+.++-.   |+..+++....-.+.+.++.      ... ++            
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            345678999999999999999999998877533   88777766555555444422      110 00            


Q ss_pred             ---------------------------------C----------------CCCChh------------hH-HHHHHHHHH
Q 015427          169 ---------------------------------K----------------LPSGFN------------AW-VSIFLFALV  186 (407)
Q Consensus       169 ---------------------------------~----------------~~~~~~------------~~-~~~~~~g~~  186 (407)
                                                       .                .+.+.+            +. ...+..+.+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                             0                000011            22 223444555


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCC---CCCcchhhh
Q 015427          187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD---ESNSSLWGS  263 (407)
Q Consensus       187 ~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~---~~~~~~~~~  263 (407)
                      ... .+..++.|+.+++++..+++..++-+|+.+++.++.+||++..+.++++++++|+++++..+..   +........
T Consensus       169 WF~-anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ll  247 (416)
T KOG2765|consen  169 WFL-ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLL  247 (416)
T ss_pred             HHH-HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhH
Confidence            544 6668999999999999999999999999999999999999999999999999999999987632   223334568


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccC----ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 015427          264 GEWWMLLAAQSMAVGTVMVRWVSKYS----DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  339 (407)
Q Consensus       264 G~l~~l~sa~~~a~~~v~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~  339 (407)
                      |+++++++|+.||+|.++.|+...++    +.-...++..++..+++.|..++.+.... +.+.-++......++..+++
T Consensus       248 G~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~~vv~~~li  326 (416)
T KOG2765|consen  248 GNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFSLVVFNNLI  326 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeEeeeHhhHH
Confidence            99999999999999999999865443    55556667777777777766655433211 12233455566667788899


Q ss_pred             HHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          340 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       340 ~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      +++++-.+|.+|+-..+|.++.+...++...+++.+.++-|..+++.+++|++.|++|.+++++..+
T Consensus       327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            9999999999999999999999999999999999999999999999999999999999999987643

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=2.1e-18  Score=149.50  Aligned_cols=280  Identities=16%  Similarity=0.138  Sum_probs=223.2

Q ss_pred             HHHHHHH-HHHHHHHHhHHHHHHhhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVL-VSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       115 ~~~~l~~-~~~~~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      +.++.+. +++.++.+....-..++-++++ |...+|+.+..-.++..+++.++++.   ....|++.++.+++....++
T Consensus        17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~~~~~~hYilla~~DVEaNy   93 (336)
T KOG2766|consen   17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY---IKAKWRHYILLAFVDVEANY   93 (336)
T ss_pred             hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH---HHHHHHHhhheeEEeecccE
Confidence            4444433 5666666666666666656566 99999999999999999999887633   23566778888988877554


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC---CCCCCcchhhhHHHHHH
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA---FDESNSSLWGSGEWWML  269 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~~~~~~G~l~~l  269 (407)
                       +...|.||++...+..+-......+.+++|++++.|....++.|+++|++|++++...+   .+..+.+...+|+.+.+
T Consensus        94 -~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi  172 (336)
T KOG2766|consen   94 -FVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI  172 (336)
T ss_pred             -EEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence             77899999999999999999999999999999999999999999999999999998876   23334556679999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 015427          270 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF  349 (407)
Q Consensus       270 ~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~  349 (407)
                      +++-+||+.++..+.+.|+.+..+++....++++++..+. ++.+....  ...+++......+.  ..++..+-|.+..
T Consensus       173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~--~tl~w~~~i~~yl~--f~L~MFllYsl~p  247 (336)
T KOG2766|consen  173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHV--STLHWDSAIFLYLR--FALTMFLLYSLAP  247 (336)
T ss_pred             ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-Hhhhccce--eeEeehHHHHHHHH--HHHHHHHHHHhhH
Confidence            9999999999999999999999999999999999999998 44443322  22344433222222  2344555555656


Q ss_pred             HHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          350 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       350 ~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      .-++.-+++...+-..+.-.|+++.  ..||.+.++...+..+.+..|.++|..++
T Consensus       248 il~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  248 ILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             HheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence            6788889999988889999999988  67899999999999999999999987654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.67  E-value=7.6e-16  Score=119.86  Aligned_cols=133  Identities=20%  Similarity=0.225  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChhhHHHHHHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASCFQG  193 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~  193 (407)
                      ..++.++++++++...++.|...+++||...+++|.++..+++..++...++....   ..|.|..+.+.|.. ...+..
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHHHH
Confidence            46788999999999999999999999999999999999999999998888776544   66888888888865 466888


Q ss_pred             HHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 015427          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (407)
Q Consensus       194 ~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  250 (407)
                      +||+|++...++...++..++|+++++++++++|||++..+|+|++++.+|++++..
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999999988754

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.59  E-value=2.2e-14  Score=111.74  Aligned_cols=137  Identities=20%  Similarity=0.319  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 015427          264 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  343 (407)
Q Consensus       264 G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~  343 (407)
                      ...+++++++.+++..++.|-..++.||...+....+...+.+..+....+....   ....+...|..++.-| +.+++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSG-la~gl   79 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSG-LAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHH-HHHHH
Confidence            5689999999999999999999999999999999999999888888888776542   2235778888787777 77899


Q ss_pred             HHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhccc
Q 015427          344 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  404 (407)
Q Consensus       344 ~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~  404 (407)
                      +..+|++|++..+++++.++.-+.|+++++++++++||+++..+++|+++|++|++++.++
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~~  140 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSLR  140 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEecC
Confidence            9999999999999999999999999999999999999999999999999999999988753

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.59  E-value=3.6e-13  Score=120.47  Aligned_cols=263  Identities=14%  Similarity=0.105  Sum_probs=199.7

Q ss_pred             HhhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHH
Q 015427          136 KEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRK-----LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSV  209 (407)
Q Consensus       136 k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~  209 (407)
                      |...++++ |..++..++++-.++....-...+.+     .+..|++..+-+...++..+...++-+++++|++++..++
T Consensus        36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM  115 (349)
T KOG1443|consen   36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTM  115 (349)
T ss_pred             hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeee
Confidence            34444566 88888888887777655544333222     2456666666666666677889999999999999999999


Q ss_pred             HhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhccc-
Q 015427          210 IIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKY-  288 (407)
Q Consensus       210 i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~-  288 (407)
                      .++..++|+.+++.+|.=||+++.-..-++++.+|+.+.++++.+     ....|..+.+++.++-++...+.+.+.++ 
T Consensus       116 ~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq-----f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~  190 (349)
T KOG1443|consen  116 TKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ-----FNIEGFFLVLAASLLSGLRWAFTQMLLRNQ  190 (349)
T ss_pred             ccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc-----eeehhHHHHHHHHHhhhhhHHHHHHHHhcC
Confidence            999999999999988888999999999999999999999987533     33479999999999999998888876654 


Q ss_pred             ----CChHHHHHHHHHHHHHHHHHHHHHhcCCCcc---cccccCCHHHHHHHHHHHHHHHHHHHHH---HHHHhccCChh
Q 015427          289 ----SDPVMATGWHMVIGGLPLMVISVLNHDPVYG---ESVKELTSSDILALLYTSIFGSAISYGV---YFYSATKGSLT  358 (407)
Q Consensus       289 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~g~~~~~~~~~l---~~~al~~~~~~  358 (407)
                          .+|....+...-...+.+++..+.+|++...   ..+...+.......+..-..+..+++.+   .+.-+.+.+..
T Consensus       191 ~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~l  270 (349)
T KOG1443|consen  191 PSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSL  270 (349)
T ss_pred             ccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccce
Confidence                3678888888888888888888888886432   1112222222222222222444445533   24457788999


Q ss_pred             hHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          359 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       359 ~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      +.++....+-+...+++.++.+|.++..+|+|..+.+.|+.+...
T Consensus       271 tlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  271 TLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             eeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999843

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.56  E-value=2.7e-12  Score=116.54  Aligned_cols=274  Identities=15%  Similarity=0.138  Sum_probs=209.0

Q ss_pred             HHHHHhHHHHHHhhccCcC-HHHHHH--HHHHHHHHHHHHHHHHhCCCC-CCChhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 015427          125 FFFWGTAMVAMKEVLPKAG-TFFVAA--FRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFLAQGLQ  200 (407)
Q Consensus       125 ~~~~~~~~~~~k~~~~~~~-p~~~~~--~r~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~al~  200 (407)
                      ++.-..+.+.+|.++...+ |..+..  .+++...+.+...-..+-.+. +.+++..++++...++... ....-..+++
T Consensus        21 ~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~-~i~t~~~slk   99 (314)
T KOG1444|consen   21 CLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVG-MLFTGSKSLK   99 (314)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHH-HHHHcccccc
Confidence            3333445667798887655 555444  788777776655443333233 4566777777777776433 6667778999


Q ss_pred             ccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 015427          201 RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTV  280 (407)
Q Consensus       201 ~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a~~~v  280 (407)
                      +.++...++++..+|+++++.+.+++|.+++...|.++....+|......++...+     ..|+.+++...+..+.+.+
T Consensus       100 ~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~-----~~gY~w~~~n~~~~a~~~v  174 (314)
T KOG1444|consen  100 YLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFN-----LRGYSWALANCLTTAAFVV  174 (314)
T ss_pred             ccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceec-----chhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999887664333     2589999999999999999


Q ss_pred             HHHhhcc--cCChHHHHHHHHHHHHHHHHHHHHHhcCCC-ccccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015427          281 MVRWVSK--YSDPVMATGWHMVIGGLPLMVISVLNHDPV-YGESV-KELTSSDILALLYTSIFGSAISYGVYFYSATKGS  356 (407)
Q Consensus       281 ~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~  356 (407)
                      ..|+..+  +.+.+.+.+|..+.+........++.++.. ...+. ...+...+..+..-++++.++.|.. ....+..+
T Consensus       175 ~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~~ct~~~S  253 (314)
T KOG1444|consen  175 YVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS-FLCTRVNS  253 (314)
T ss_pred             HHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhcc
Confidence            9998654  346677899999999999988888777633 10011 1234556777777777777777754 67788889


Q ss_pred             hhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          357 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       357 ~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +.+.++.....-..+.+.+.++++++.++...+|..+-++|.++|++.+
T Consensus       254 AtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  254 ATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             ccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            9999988866666666777777788899999999999999999998754

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.54  E-value=1.7e-12  Score=117.72  Aligned_cols=217  Identities=16%  Similarity=0.060  Sum_probs=167.0

Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          172 SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       172 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      ..+++.+++.+++++... .+.+.++++++++++..+++..+..+++++++.+++|+|+++.||+++++.++|+.++..+
T Consensus        12 ~~~~~~~~~~vPA~lY~~-qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   12 KSPKDTLKLAVPALLYAI-QNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HhHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence            345788889999998755 6679999999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCC----C-C-------cchhhhHHHHHHHHHHHHHHHHHHHHhhcccC--ChHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015427          252 AFDE----S-N-------SSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPV  317 (407)
Q Consensus       252 ~~~~----~-~-------~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (407)
                      +...    + .       ......|+++.++++++.++..++.++..|+.  +.+..+....+.+.++.++.....+...
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~  170 (244)
T PF04142_consen   91 SSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA  170 (244)
T ss_pred             CccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            6322    0 0       12346899999999999999999999987765  4455555666677776666655544322


Q ss_pred             cc--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 015427          318 YG--ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVT  394 (407)
Q Consensus       318 ~~--~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~li  394 (407)
                      ..  ..+..++...|..++..++     +=.+....+|+.+...=.....+..+++.+.++++|+.+++....+|+.++
T Consensus       171 ~~~~g~f~G~~~~~~~~i~~~a~-----gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  171 ISESGFFHGYSWWVWIVIFLQAI-----GGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cccCCchhhcchHHHHHHHHHHH-----hhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            11  1122334444443333332     223445667999998889999999999999999999999999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.54  E-value=5.9e-11  Score=109.44  Aligned_cols=284  Identities=14%  Similarity=0.064  Sum_probs=212.0

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhccC----cCHHHHHHHHHHHHHHHHHHHHHHhCCC----C--------CCChhhHHH
Q 015427          116 LEWAVLVSPFFFWGTAMVAMKEVLPK----AGTFFVAAFRLIPAGLLLITFASSQGRK----L--------PSGFNAWVS  179 (407)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~~~k~~~~~----~~p~~~~~~r~~~~~l~~~~~~~~~~~~----~--------~~~~~~~~~  179 (407)
                      .-++.++...+.++......|.....    ..|....+.-=++-.+++...+++..++    .        ...+++..+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            44666777788888888888876542    4577778877777777777776665321    1        123456778


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCC-----
Q 015427          180 IFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFD-----  254 (407)
Q Consensus       180 ~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-----  254 (407)
                      +.+++++... .+-++|+++.+.+++..++...+-.+.++++..+++++|+++.||.++++.+.|+.++..+..+     
T Consensus        95 ~~vPa~iYal-qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~  173 (345)
T KOG2234|consen   95 VSVPALIYAL-QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK  173 (345)
T ss_pred             HHHHHHHHHH-hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence            8888887655 5669999999999999999999999999999999999999999999999999999999844321     


Q ss_pred             -CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhcccC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCc--ccccccCCHHH
Q 015427          255 -ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVY--GESVKELTSSD  329 (407)
Q Consensus       255 -~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  329 (407)
                       .........|....+.+++.-+...++.+++.|+.  +.+..+.-...++.+..+...+..++...  ...+..++...
T Consensus       174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v  253 (345)
T KOG2234|consen  174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV  253 (345)
T ss_pred             CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence             12233456899999999999999999999987653  44555555556666666666655544322  12234556666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          330 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       330 ~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      |..++..++-+-.++     ..+++.+-..-.-...+..+++.+.++.+|+-.++....+|+.+++.++.+|...+
T Consensus       254 w~vVl~~a~gGLlvs-----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P  324 (345)
T KOG2234|consen  254 WLVVLLNAVGGLLVS-----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYP  324 (345)
T ss_pred             HHHHHHHhccchhHH-----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCC
Confidence            776666654433333     33566666666666778889999999999999999999999999999999998543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.52  E-value=1.1e-13  Score=112.64  Aligned_cols=123  Identities=24%  Similarity=0.383  Sum_probs=108.6

Q ss_pred             HHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 015427          126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK--LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTS  203 (407)
Q Consensus       126 ~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~  203 (407)
                      ++||...++.|...++.||....++|+..+.+ +++.....+++  ...+++++...+..++++...++.++++++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            46899999999999999999999999999997 55555444433  4556678888888888877788999999999999


Q ss_pred             hhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 015427          204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (407)
Q Consensus       204 ~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  249 (407)
                      ++.++++.+++|+++.+++++++||++++.+++|++++++|+.++.
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.52  E-value=3.7e-13  Score=115.74  Aligned_cols=254  Identities=11%  Similarity=0.026  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHH
Q 015427          144 TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAA  223 (407)
Q Consensus       144 p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~  223 (407)
                      ...++++++.+-.++.-++...+++ .+..+..-+.....++ ...+.++..+.+++++|--...+-+++-|+=+++++.
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~-~~~D~t~~~~YaAcs~-sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV  130 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKK-TEIDNTPTKMYAACSA-SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV  130 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeeccc-ccccCCcchHHHHHHH-HHHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence            3445555555555544333222221 2222222222333333 4455777889999999988888889999999999999


Q ss_pred             HHcCCcchHHHHHHHHHHHHHHHHhhcCCC--CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhcccC--ChHHHHHHHH
Q 015427          224 LLFGESIGLVGAGGLVLGVIGLLLLEAPAF--DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS--DPVMATGWHM  299 (407)
Q Consensus       224 l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~--~~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~--~~~~~~~~~~  299 (407)
                      ++.+++.++.+..+++++++||++..+.+.  .+.+......|.++.+++-..-+.....+.++++..  ...+++.+..
T Consensus       131 l~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~N  210 (337)
T KOG1580|consen  131 LFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTN  210 (337)
T ss_pred             hhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHH
Confidence            999999999999999999999999999762  222334456899999999988888888887766543  4456788888


Q ss_pred             HHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHh
Q 015427          300 VIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYL  379 (407)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~  379 (407)
                      +.+.+.+..-.++.++-.....+.+..+..|+-+..++ +++.+++++.++-....+|.+-+++..+.-.++++.++++|
T Consensus       211 lwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~a-i~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf  289 (337)
T KOG1580|consen  211 LWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLA-IASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLF  289 (337)
T ss_pred             HHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHH-HHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHh
Confidence            88888777666665553211122334555666677676 66888999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHH
Q 015427          380 GETFSPLQLVGAAVTVVAIYL  400 (407)
Q Consensus       380 ~e~~~~~~~iG~~lil~g~~l  400 (407)
                      +.+++..||+|.+++..+...
T Consensus       290 ~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  290 NNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             cCcCcHHHHHHHHHHHHHhhh
Confidence            999999999999999988764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.47  E-value=3.7e-11  Score=108.54  Aligned_cols=245  Identities=16%  Similarity=0.107  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHH
Q 015427          144 TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLA  222 (407)
Q Consensus       144 p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla  222 (407)
                      |.+..+---+-+.++-+......+.....+.+.+...++.|++... ++...+.|+++..++.+.++ ..++-+.+.+.+
T Consensus        12 ~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~i-Gq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   12 PANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAI-GQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            5555544444444444545554444443334777888888887755 78899999999999999999 678888899999


Q ss_pred             HHHcCCcchHHH----HHHHHHHHHHHHHhhcCCCCCCC---cchhhhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHH
Q 015427          223 ALLFGESIGLVG----AGGLVLGVIGLLLLEAPAFDESN---SSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMAT  295 (407)
Q Consensus       223 ~l~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~---~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~  295 (407)
                      .++++|--+..+    .+++++.++|+.+.+..+.+++.   ......|.+..+++.++|..|.+..|..  +.+++...
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~  168 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAF  168 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhH
Confidence            999999776555    44899999999999988743332   3355689999999999999999998874  35777766


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHH
Q 015427          296 GWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFG  375 (407)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~  375 (407)
                      .-+.+...+-..++..+.+.+..       ....|. -+..| +.-.++..++..+.++.+.+..-.+..+.++++.+.+
T Consensus       169 lPqaiGm~i~a~i~~~~~~~~~~-------~k~~~~-nil~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgG  239 (269)
T PF06800_consen  169 LPQAIGMLIGAFIFNLFSKKPFF-------EKKSWK-NILTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGG  239 (269)
T ss_pred             HHHHHHHHHHHHHHhhccccccc-------ccchHH-hhHHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhh
Confidence            65555444444444443322211       122222 22233 3456677888999999999999999999999999999


Q ss_pred             HHHhCCCCCHHH----HHHHHHHHHHHHH
Q 015427          376 FLYLGETFSPLQ----LVGAAVTVVAIYL  400 (407)
Q Consensus       376 ~~~~~e~~~~~~----~iG~~lil~g~~l  400 (407)
                      ++++||+=+..+    ++|.++++.|.++
T Consensus       240 I~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  240 IFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             heEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999987664    6788888888765

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.47  E-value=5.2e-13  Score=108.73  Aligned_cols=125  Identities=30%  Similarity=0.560  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015427          273 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA  352 (407)
Q Consensus       273 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al  352 (407)
                      ++|+.+.+..|+..++.|+.....+.+..+.+ ..+...+.+...    ....+...+...++.+++++++++.++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            36889999999999999999999999999998 666666655432    2456777888889899888899999999999


Q ss_pred             ccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          353 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       353 ~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      ++.+++.++++.+++|+++.+++++++||+++..+++|+++++.|++++.
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.43  E-value=8.3e-11  Score=105.57  Aligned_cols=258  Identities=12%  Similarity=0.059  Sum_probs=205.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHH
Q 015427          143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLA  222 (407)
Q Consensus       143 ~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla  222 (407)
                      ++..+.+.+-+.+.++-..++..++.+ ....+.+++....++.+.. +-.|.|.|++|++--.-.+-+++--+-+++++
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn~~-s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTNTL-SSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHhhc-chHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            478888999999988887666555554 3344677777777776655 55699999999998888888999999999999


Q ss_pred             HHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCC----CCcchhhhHHHHHHHHHHHHHHHHHHHHhhcc--cCChHHHHH
Q 015427          223 ALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDE----SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATG  296 (407)
Q Consensus       223 ~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~----~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~--~~~~~~~~~  296 (407)
                      .++.|.|++..+.+...++-+|+.+....+.++    ........|+.+....-+.-++.+..+.++-+  +.+.+++++
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            999999999999999999999999887654221    11123457998888888888888888887655  457899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHH
Q 015427          297 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF  376 (407)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~  376 (407)
                      +..+.+++......+..+...-.-.+....+..+.-++.+. +|.++++.+.++-+++.++.+.+.++.+.-+++++++.
T Consensus       208 ~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~  286 (327)
T KOG1581|consen  208 GVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSC  286 (327)
T ss_pred             HHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHH
Confidence            99999999988874433332211233445677777777776 55777888889999999999999999999999999999


Q ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          377 LYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       377 ~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      +.||.+++..|++|..++..|+.+-.+
T Consensus       287 i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  287 IVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHhCCccchhhccCeeeehHHHHHHHH
Confidence            999999999999999999999887443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.36  E-value=1.1e-10  Score=103.20  Aligned_cols=273  Identities=18%  Similarity=0.153  Sum_probs=188.2

Q ss_pred             HhHHHHHHhhcc----Cc----CHHHHHHHHHHHHHHHHHHHHHHhCCCCC--------------CChhhHHHHHHHHHH
Q 015427          129 GTAMVAMKEVLP----KA----GTFFVAAFRLIPAGLLLITFASSQGRKLP--------------SGFNAWVSIFLFALV  186 (407)
Q Consensus       129 ~~~~~~~k~~~~----~~----~p~~~~~~r~~~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~g~~  186 (407)
                      +.+.+..|++.+    +.    +|+.....-++.-.+++..+.+.+.+...              .++-.....+..+.+
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~   95 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC   95 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence            445666687653    12    26666655555555666666555433211              011112223346666


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCC-----CCCCcchh
Q 015427          187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF-----DESNSSLW  261 (407)
Q Consensus       187 ~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-----~~~~~~~~  261 (407)
                      ..+ +..+.|.++.+++++.-+++.....+|+.+++.-+++.+++..+|+|+....+|++++-..+.     .-.+.+..
T Consensus        96 Di~-gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~i  174 (372)
T KOG3912|consen   96 DIA-GSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSI  174 (372)
T ss_pred             HHh-hhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccc
Confidence            655 556889999999999999999999999999999999999999999999999999999876641     11223445


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcc--cCChHHHHHHHHHHHHHHHHHHHHHhcC---C-CcccccccCCHHHHHH---
Q 015427          262 GSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATGWHMVIGGLPLMVISVLNHD---P-VYGESVKELTSSDILA---  332 (407)
Q Consensus       262 ~~G~l~~l~sa~~~a~~~v~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~---  332 (407)
                      ..|+++.+++-+.-|+.+++.+|..+  +.+|.....+..+++.++...++.....   + .+..+ ......+|..   
T Consensus       175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~-~~g~~eD~~~~~~  253 (372)
T KOG3912|consen  175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCN-PRGVLEDWGDAFA  253 (372)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCC-CCcchhhHHHHHH
Confidence            68999999999999999999888655  4689999999999997666555443211   1 11100 0111222221   


Q ss_pred             ------HHHHHHHHHHHHHHHHHH----HhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          333 ------LLYTSIFGSAISYGVYFY----SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       333 ------ll~~g~~~~~~~~~l~~~----al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                            .++....+..+.-.+++.    .-+..++++-.++..+...+--++++....|.+...|+.|.++.+.|+++|+
T Consensus       254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  122222222222222222    2456788999999999999999999999999999999999999999999987


Q ss_pred             c
Q 015427          403 F  403 (407)
Q Consensus       403 ~  403 (407)
                      .
T Consensus       334 ~  334 (372)
T KOG3912|consen  334 Q  334 (372)
T ss_pred             H
Confidence            4

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.35  E-value=4.4e-11  Score=110.44  Aligned_cols=132  Identities=19%  Similarity=0.254  Sum_probs=115.1

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcCH--HHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGT--FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCF  191 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p--~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  191 (407)
                      ..+|.++.++++++|+...+..|...++.++  .....+++.++.++++++....++....+.+++...+..+.++...+
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALA  205 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            3578999999999999999999998877774  45555789999999988877765544445567777888888888889


Q ss_pred             HHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Q 015427          192 QGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGL  245 (407)
Q Consensus       192 ~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv  245 (407)
                      +.++++++++.+++.++.+.+++|+++++++++++||+++..+++|..+.+.|+
T Consensus       206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999986

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.28  E-value=3.3e-12  Score=112.46  Aligned_cols=269  Identities=14%  Similarity=0.095  Sum_probs=204.3

Q ss_pred             HHHHhhccC----cC-HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHh
Q 015427          133 VAMKEVLPK----AG-TFFVAAFRLIPAGLLLITFASSQGR--------KLPSGFNAWVSIFLFALVDASCFQGFLAQGL  199 (407)
Q Consensus       133 ~~~k~~~~~----~~-p~~~~~~r~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al  199 (407)
                      +.+|.++..    +| |...+..++++...+++.+-....+        +.+.+.+..+..+-..++. .+...+-++++
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence            344666653    44 8999999999988877766543322        1122333444444444443 22445668899


Q ss_pred             hccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHH
Q 015427          200 QRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGT  279 (407)
Q Consensus       200 ~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a~~~  279 (407)
                      +++++++..+=..+..+|++++..+++|+|-+..-..+..+++.|-.+=...+..  .......|.++++++.++-|+..
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~--~~~ls~~GvifGVlaSl~vAlna  201 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS--TGTLSWIGVIFGVLASLAVALNA  201 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccc--cCccchhhhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988775544322  23334589999999999999999


Q ss_pred             HHHHhhcccC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCccccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015427          280 VMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESV-KELTSSDILALLYTSIFGSAISYGVYFYSATKGS  356 (407)
Q Consensus       280 v~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~  356 (407)
                      +..|+.....  ..+.+..|..+.+.++..|...+.++-..-... ..++...|..+..-|+++..++|.- ..=+|-.+
T Consensus       202 iytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT-g~QIK~TS  280 (347)
T KOG1442|consen  202 IYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVT-GWQIKVTS  280 (347)
T ss_pred             HhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhee-eEEEEecc
Confidence            9999865443  357789999999999999998887664321111 2346777887777777776666643 33467789


Q ss_pred             hhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          357 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       357 ~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      |.++.+-...+-....+++..+++|.-+...|-|-.+++.|...|.+.|
T Consensus       281 plThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  281 PLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             cceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.28  E-value=4.6e-11  Score=95.55  Aligned_cols=105  Identities=22%  Similarity=0.291  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCC----CChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHH
Q 015427          149 AFRLIPAGLLLITFASSQGRKLP----SGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAAL  224 (407)
Q Consensus       149 ~~r~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l  224 (407)
                      .+|+.++.+++..+...+++..+    .+++.+.+.+..|.++...++.++++|+++.+ +.++++.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            57999999988888777554321    22355566677777777678899999999999 58889999999999999999


Q ss_pred             HcCCcchHHHHHHHHHHHHHHHHhhcCCCC
Q 015427          225 LFGESIGLVGAGGLVLGVIGLLLLEAPAFD  254 (407)
Q Consensus       225 ~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~  254 (407)
                      ++|||+++.++++++++++|++++..++.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999987744

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.28  E-value=2e-08  Score=94.56  Aligned_cols=286  Identities=14%  Similarity=0.067  Sum_probs=180.8

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHH-HHHHHHHHHHHHH-HHhCCC-----CCCChhhHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAF-RLIPAGLLLITFA-SSQGRK-----LPSGFNAWVSIFLFALV  186 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~-r~~~~~l~~~~~~-~~~~~~-----~~~~~~~~~~~~~~g~~  186 (407)
                      ...|++..+++.++||+.++..|+ .+.-+ ++.... -.+++.++..... ....+.     ...+.+.+...++.|++
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~   82 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL   82 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH
Confidence            467899999999999999999998 45443 222211 1112222222111 010010     12345677778888887


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcc-------hHHHHHHHHHHHHHHHHhhc----CCCC
Q 015427          187 DASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESI-------GLVGAGGLVLGVIGLLLLEA----PAFD  254 (407)
Q Consensus       187 ~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~-------~~~~~~~~~l~~~Gv~l~~~----~~~~  254 (407)
                      ... ++..++.++++..++.+..+ ..++-++..++..++++|=.       ...-.+|++++++|+++...    .+.+
T Consensus        83 W~i-G~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~  161 (345)
T PRK13499         83 WGI-GGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERK  161 (345)
T ss_pred             HHh-hhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            755 77899999999999999987 88999999999999998633       24578899999999999998    4422


Q ss_pred             C----CCcchhhhHHHHHHHHHHHHHHHHH-------HHHhh-cccCChHHHHHHHHH---HHHH-HHHHHHHH---hcC
Q 015427          255 E----SNSSLWGSGEWWMLLAAQSMAVGTV-------MVRWV-SKYSDPVMATGWHMV---IGGL-PLMVISVL---NHD  315 (407)
Q Consensus       255 ~----~~~~~~~~G~l~~l~sa~~~a~~~v-------~~r~~-~~~~~~~~~~~~~~~---~~~~-~~~~~~~~---~~~  315 (407)
                      .    ++.....+|..+++++.+.++.|+.       ..+.. ....++.....-+..   .+.+ ..+++..+   ..+
T Consensus       162 ~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~  241 (345)
T PRK13499        162 MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNK  241 (345)
T ss_pred             cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            1    2234567999999999999999994       33321 112333322222222   3333 22233332   211


Q ss_pred             CC-cccccccCC----HHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHh----hhhhhhHHHHHHHHHHHhCCCCC--
Q 015427          316 PV-YGESVKELT----SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLS----SLTFLTPMFASIFGFLYLGETFS--  384 (407)
Q Consensus       316 ~~-~~~~~~~~~----~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s----~~~~~~pv~a~i~~~~~~~e~~~--  384 (407)
                      +. ...+ ...+    ..... +..++.+.=.+++.+|..+-++.+.....    ..+.+..+++.++|++ +||.=+  
T Consensus       242 ~~~~~~~-~~~~~~~~~~n~l-~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~  318 (345)
T PRK13499        242 DLSLKAD-FSLAKPLLITNVL-LSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGAS  318 (345)
T ss_pred             Ccccchh-ccccchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCC
Confidence            10 0001 1111    12222 22233344566777778877777544333    3447888999999995 999877  


Q ss_pred             ----HHHHHHHHHHHHHHHHhcccC
Q 015427          385 ----PLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       385 ----~~~~iG~~lil~g~~l~~~~~  405 (407)
                          ...++|.+++++|.+++...+
T Consensus       319 ~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        319 RRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcc
Confidence                667999999999999987654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.27  E-value=1.7e-10  Score=97.58  Aligned_cols=139  Identities=18%  Similarity=0.289  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc-------cCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC-------CHHH
Q 015427          264 GEWWMLLAAQSMAVGTVMVRWVSK-------YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL-------TSSD  329 (407)
Q Consensus       264 G~l~~l~sa~~~a~~~v~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  329 (407)
                      |.++++.+.++.++++++.|+..+       +.++.++..+....+.+++.+..++.|++.........       +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            678999999999999999988544       45899999999999999999999998887532222111       2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          330 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       330 ~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      +..++..|++ ....+...+..+++.+|.+.++.+.++.+..++.++++|||+++..+++|.++.+.|.++|++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5555555544 344455668899999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.26  E-value=4e-10  Score=105.94  Aligned_cols=137  Identities=14%  Similarity=0.108  Sum_probs=114.3

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF  194 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  194 (407)
                      ..|.++.++++++|+...+..|...++.++.... +-..++.+++.++..........+...+...+..++++..+++.+
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l  225 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL  225 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999999999887778877765 445666666777666544322334445555678888888889999


Q ss_pred             HHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          195 LAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       195 ~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      +++++++.+++.++++.+++|++..+++++++||+++..+++|..++++|++......
T Consensus       226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999987655

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.22  E-value=5e-10  Score=104.62  Aligned_cols=268  Identities=13%  Similarity=0.074  Sum_probs=159.9

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015427          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      +...|.++.+.++++.+....+.|....+.+...   .|                .............++.|.+...++.
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~---~~----------------~~~~~~~~l~~~~W~~G~~~~~~g~   64 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGS---LR----------------AGSGGRSYLRRPLWWIGLLLMVLGE   64 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cc----------------ccchhhHHHhhHHHHHHHHHHhcch
Confidence            4567889999999999999999988654332100   00                0000000111123344444445567


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCc-chh-------hhH
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNS-SLW-------GSG  264 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~-~~~-------~~G  264 (407)
                      .+.+.|+.+.|.+..+++..+.-++.++++..++|||+++.++.|+.+++.|..++..-+.++++. +..       ..+
T Consensus        65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~  144 (300)
T PF05653_consen   65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPG  144 (300)
T ss_pred             HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcc
Confidence            788999999999999999999999999999999999999999999999999998876533222111 100       011


Q ss_pred             HHH--HHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHH-------HHHHHHHHhcCCCcccccccCCHHHHHHHHH
Q 015427          265 EWW--MLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGL-------PLMVISVLNHDPVYGESVKELTSSDILALLY  335 (407)
Q Consensus       265 ~l~--~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  335 (407)
                      .+.  .+...+...+.....++..++ +.........+++..       +.........+..     .-..+..|..++.
T Consensus       145 fl~y~~~~~~~~~~L~~~~~~r~g~~-~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~-----~f~~~~~y~l~~~  218 (300)
T PF05653_consen  145 FLVYFILVLVLILILIFFIKPRYGRR-NILVYISICSLIGSFTVLSAKAISILIKLTFSGDN-----QFTYPLTYLLLLV  218 (300)
T ss_pred             eehhHHHHHHHHHHHHHhhcchhccc-ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCch-----hhhhhHHHHHHHH
Confidence            111  111112222222222232221 111111111111110       1111111111111     1123445544443


Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHhhhhh-hhHHHHHHHHHHHhCCC--CCH----HHHHHHHHHHHHHHHhcccCC
Q 015427          336 TSIFGSAISYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGET--FSP----LQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       336 ~g~~~~~~~~~l~~~al~~~~~~~~s~~~~-~~pv~a~i~~~~~~~e~--~~~----~~~iG~~lil~g~~l~~~~~~  406 (407)
                      . +.+...+....++|+++.++..+.++.+ .-...+++-+.++|+|.  .+.    ....|..+++.|+++++..|+
T Consensus       219 ~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  219 L-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             H-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            3 5667778888899999999998888877 56677788888899976  444    346788999999999987664

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.19  E-value=2.1e-10  Score=96.35  Aligned_cols=208  Identities=12%  Similarity=0.038  Sum_probs=154.3

Q ss_pred             HHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHH
Q 015427          191 FQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLL  270 (407)
Q Consensus       191 ~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~  270 (407)
                      .+..|..++.+.++++++.+..+.-.|+.+++++.+|+|+...++++.++++.|++++.+.+.   ......+|+.++..
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN---~~a~e~iGi~~AV~  142 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN---EHADEIIGIACAVG  142 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc---hhhhhhhhHHHHHH
Confidence            445899999999999999999999999999999999999999999999999999999997551   22234589999999


Q ss_pred             HHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHH----HHHH-HHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHH
Q 015427          271 AAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGL----PLMV-ISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY  345 (407)
Q Consensus       271 sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~  345 (407)
                      ++..-|+|.+..|+.....+-.....+.+..+..    ..++ ..+.+.+..   .+.......|..+...+.+..+.. 
T Consensus       143 SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE---~~qsFA~~PWG~l~G~A~L~lAFN-  218 (290)
T KOG4314|consen  143 SAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVE---HLQSFAAAPWGCLCGAAGLSLAFN-  218 (290)
T ss_pred             HHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchH---HHHHHhhCCchhhhhHHHHHHHHh-
Confidence            9999999999999977655433333333322221    1111 112222211   122233445666665555543333 


Q ss_pred             HHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          346 GVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       346 ~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      .+.+.++....|...++............++++-+-..+...+.|..+|+.|.+++..++
T Consensus       219 ~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  219 FLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             hheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            455778888999999999999999999999986666688899999999999998877654

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.19  E-value=1.1e-09  Score=93.94  Aligned_cols=270  Identities=15%  Similarity=0.156  Sum_probs=197.4

Q ss_pred             HHHHHHhhccCcC---HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhH
Q 015427          131 AMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLG  207 (407)
Q Consensus       131 ~~~~~k~~~~~~~---p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a  207 (407)
                      +.+..|.+....+   -+.+++.+.+...+-+...-..+-.+.+.  ++..+++...++... ....--.+++|+++...
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~--t~aK~WfpiSfLLv~-MIyt~SKsLqyL~vpiY   97 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRL--TKAKKWFPISFLLVV-MIYTSSKSLQYLAVPIY   97 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheeh--hhhhhhcCHHHHHHH-HHHhcccceeeeeeeHH
Confidence            3455577766433   56666777666555444433332222222  222233333333222 22344679999999999


Q ss_pred             HHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhh
Q 015427          208 SVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDES--NSSLWGSGEWWMLLAAQSMAVGTVMVRWV  285 (407)
Q Consensus       208 ~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~--~~~~~~~G~l~~l~sa~~~a~~~v~~r~~  285 (407)
                      ++.++++.+.++....+++|.|++-.+....++.+..-+...+.+....  .....+.|+++...-.+..+.+-...|+-
T Consensus        98 TiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkr  177 (309)
T COG5070          98 TIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKR  177 (309)
T ss_pred             HHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHh
Confidence            9999999999999999999999999999999999988888877663111  11245679999999999999998888764


Q ss_pred             cc--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhh
Q 015427          286 SK--YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSL  363 (407)
Q Consensus       286 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~  363 (407)
                      .+  +..-....+|..+++..++..+.++++++...+-....+.....++...|+...++.| +-.+.++-.+.++.+++
T Consensus       178 i~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy-~saWcvrVtSSTtySMv  256 (309)
T COG5070         178 IKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY-CSAWCVRVTSSTTYSMV  256 (309)
T ss_pred             hcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh-ccceeEeehhhhHHHHH
Confidence            43  2334567899999999999999988887654322344556666777878877777776 44778899999999999


Q ss_pred             hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhccc
Q 015427          364 TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  404 (407)
Q Consensus       364 ~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~  404 (407)
                      ..++-.-..+.|.++|+|+.+...+....+-..+..+|...
T Consensus       257 GALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava  297 (309)
T COG5070         257 GALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             HHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988877777777654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.13  E-value=2.5e-09  Score=100.53  Aligned_cols=136  Identities=14%  Similarity=0.146  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCChhhHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL--PSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      ..|.++.++++++|+...+..|...+. ++...+.+++.++.+.+.++........  ..+...+..++..++++..+.+
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~  227 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI  227 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence            468899999999999999999886543 3455677888888888877766544322  2344677788888888888899


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      .++++++++.+++.++.+.+++|++.++++++++||+++..+++|.++++.|+.++...
T Consensus       228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.13  E-value=2.4e-09  Score=100.05  Aligned_cols=133  Identities=17%  Similarity=0.216  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 015427          265 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS  344 (407)
Q Consensus       265 ~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~  344 (407)
                      .++.++++++++..+++.|+..++.++.  ..+......++..++........   .+...+. .++..+..+.++....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQV---GWSRLPA-TFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccC---CCCCcch-hhHHHHHHHHHHHHHH
Confidence            5688999999999999999887775553  35555566666666655431111   1222233 3333444555667778


Q ss_pred             HHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          345 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       345 ~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      +.++++++++.+++.++++.+++|+++.+++++++||+++..+++|.++++.|++++..
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.13  E-value=1.9e-09  Score=101.48  Aligned_cols=140  Identities=14%  Similarity=0.209  Sum_probs=112.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 015427          260 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  339 (407)
Q Consensus       260 ~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~  339 (407)
                      ...+|+++.+++++.|+...+..|.. .+.++.+..+++.+++.++..+......+...... ...+...+. ....+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKT-LIQTPQKIF-MLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HHcCHHHHH-HHHHHHH
Confidence            34589999999999999999999876 67899999999999998877766554432110000 001233333 3335667


Q ss_pred             HHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          340 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       340 ~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      +.+..+.++++++++.+++.++++.++.|++..+++.+++||+++..+++|.++.++|++++.
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            778889999999999999999999999999999999999999999999999999999998865

>TIGR00688 rarD rarD protein

Probab=99.10  E-value=2.8e-09  Score=98.20  Aligned_cols=139  Identities=17%  Similarity=0.192  Sum_probs=109.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccccccCCHHH-HHHHHHHHHHH
Q 015427          263 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVY-GESVKELTSSD-ILALLYTSIFG  340 (407)
Q Consensus       263 ~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~ll~~g~~~  340 (407)
                      +|..+.+++++.|+...+..|.. .+.++.++.+++++++.+++.++.....+... .......+... +..+...| +.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG-LL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH-HH
Confidence            48899999999999999999984 56999999999999998887766654432110 00011112222 33334444 34


Q ss_pred             HHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          341 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       341 ~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      ....+.+++.++++.+++.++.+.++.|+++++++.+++||+++..+++|.++.++|++++..
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            667788999999999999999999999999999999999999999999999999999987643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.07  E-value=5.4e-09  Score=98.40  Aligned_cols=133  Identities=17%  Similarity=0.110  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDASCFQG  193 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~  193 (407)
                      ..|.++.++++++|+...+..|...++.++.....   ..+.+.+.+.....+. ....+...+..++..++ ...+++.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~-~t~~~~~  230 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAA-AMGFGYA  230 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHH-HHHHHHH
Confidence            45889999999999999999998777777765432   2233333332222322 12344456666666554 5677889


Q ss_pred             HHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       194 ~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      ++++++++.+++.++.+.+++|++..+++++++||+++..+++|.++++.|+.+....
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999887654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.06  E-value=6.3e-09  Score=99.91  Aligned_cols=137  Identities=13%  Similarity=0.142  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCH-HHHHHHHHHHHHHHHHHHHHHhCCC-CC---CCh-hhHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGT-FFVAAFRLIPAGLLLITFASSQGRK-LP---SGF-NAWVSIFLFALVDA  188 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p-~~~~~~r~~~~~l~~~~~~~~~~~~-~~---~~~-~~~~~~~~~g~~~~  188 (407)
                      ..|.+++++++++|++..++.|...++.++ ...+++...++.+.+.+......+. ..   ... ......+..+++ .
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t  266 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-T  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-H
Confidence            458889999999999999999887777654 4666777777766665544443221 11   111 112223333443 4


Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       189 ~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      .+.+.++++++++.+++.+++..+++|++++++++++++|+++..+++|.++++.|+.++..+.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            5578899999999999999999999999999999999999999999999999999999998654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.98  E-value=3.4e-08  Score=93.17  Aligned_cols=138  Identities=15%  Similarity=0.146  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcC---HHHHHHHHHHHHHHHHHHHHHHhCCC-------CCCChhhHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFASSQGRK-------LPSGFNAWVSIFLFA  184 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~---p~~~~~~r~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~g  184 (407)
                      ..|.++.++++++|+...+..|...++.+   .....++...++.+.+.......+..       ...+...+..++..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            46889999999999999999988655433   23334444444444333332222211       133456788888899


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      ++...+.+.++++++++.++..++.+..++|++..+++++++||+++..+++|.+++++|+.+...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            99999999999999999999999999999999999999999999999999999999999999887654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.91  E-value=2.9e-10  Score=98.98  Aligned_cols=273  Identities=17%  Similarity=0.137  Sum_probs=191.9

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (407)
                      .+++.++-++.||....+..+.  +-+|.+.+.---+-+.++.+..++.  .....+.+.+...++.|++... ++...+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~~--~~p~~T~~~~iv~~isG~~Ws~-GQ~~Qf   77 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFLF--VSPELTLTIFIVGFISGAFWSF-GQANQF   77 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHhee--ecCccchhhHHHHHHhhhHhhh-hhhhhh
Confidence            4677889999999988776432  3446666555444444444444443  2233455777777888887765 778999


Q ss_pred             HHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHH----HHHHHHHHHHHHHhhcCCC---CCCCcchhhhHHHHH
Q 015427          197 QGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVG----AGGLVLGVIGLLLLEAPAF---DESNSSLWGSGEWWM  268 (407)
Q Consensus       197 ~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~---~~~~~~~~~~G~l~~  268 (407)
                      .|+++..++.+.++ +.+.-+-+.+++.+.++|-.+..+    .+++++.+.|+.+....+.   ++++.+...+|....
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L  157 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL  157 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence            99999999999988 778888899999999999777665    5688899999999888762   333444566899999


Q ss_pred             HHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHH
Q 015427          269 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVY  348 (407)
Q Consensus       269 l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~  348 (407)
                      +.+.++|..|-++.+...  .+.+....-+. ++.++.....-.....      .. ..+..+.-+.-|++ -+.+...+
T Consensus       158 ~iSt~GYv~yvvl~~~f~--v~g~saiLPqA-iGMv~~ali~~~~~~~------~~-~~K~t~~nii~G~~-Wa~GNl~m  226 (288)
T COG4975         158 LISTLGYVGYVVLFQLFD--VDGLSAILPQA-IGMVIGALILGFFKME------KR-FNKYTWLNIIPGLI-WAIGNLFM  226 (288)
T ss_pred             eeeccceeeeEeeecccc--ccchhhhhHHH-HHHHHHHHHHhhcccc------cc-hHHHHHHHHhhHHH-HHhhHHHH
Confidence            999999999999888764  33333333222 2222222222222211      11 22222233334433 45567788


Q ss_pred             HHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHH----HHHHHHHHHHHHHhcccC
Q 015427          349 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       349 ~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~----~iG~~lil~g~~l~~~~~  405 (407)
                      ..+-++.+.++.=.+..+..+++.+-|+++++|+=+..+    ++|.++++.|..++...|
T Consensus       227 l~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         227 LLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             HHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence            888888888888888899999999999999999999877    678899999988877655

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.91  E-value=5.1e-08  Score=79.17  Aligned_cols=122  Identities=17%  Similarity=0.257  Sum_probs=93.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 015427          263 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  342 (407)
Q Consensus       263 ~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~  342 (407)
                      .|+++.+++.++.+..+++.|+-.++.+....... .    . ......             .++   ...++.|+++.+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~----~-~~~~~~-------------~~p---~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F----I-AALLAF-------------GLA---LRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H----H-HHHHHH-------------hcc---HHHHHHHHHHHH
Confidence            47889999999999999999998766543221111 0    0 000000             011   114567888999


Q ss_pred             HHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHH--HhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          343 ISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFL--YLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       343 ~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~--~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      +++.+|.+++++.+++++.++....++...+.++.  +|||++++.+++|.++|++|++++++.++
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999999999999999998888888874  89999999999999999999999987654

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.84  E-value=2.7e-07  Score=81.70  Aligned_cols=272  Identities=12%  Similarity=0.046  Sum_probs=183.6

Q ss_pred             HhHHHHHHhhcc--CcC--HHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 015427          129 GTAMVAMKEVLP--KAG--TFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSA  204 (407)
Q Consensus       129 ~~~~~~~k~~~~--~~~--p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  204 (407)
                      =.+.....++.+  ++.  -|.+++.++++-..+.+..+...+.+.  ....|+.....+++... .+++..-++.|++-
T Consensus        56 l~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~--r~iP~rtY~~la~~t~g-tmGLsn~SlgYLNY  132 (367)
T KOG1582|consen   56 LVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR--RVIPWRTYVILAFLTVG-TMGLSNGSLGYLNY  132 (367)
T ss_pred             HHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccc--eecchhHhhhhHhhhhh-ccccCcCccccccC
Confidence            334444444444  344  467788887776655554432222111  11334444555554433 56677788888876


Q ss_pred             hhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHh
Q 015427          205 GLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW  284 (407)
Q Consensus       205 s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~  284 (407)
                      -.-.+.+.+--+=+.+.+.++-|.|.+..+.++..+...|.++.+..+...+ ......|+.+.-.+-++-|+---++++
T Consensus       133 PtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s-PNF~~~Gv~mIsgALl~DA~iGNvQEk  211 (367)
T KOG1582|consen  133 PTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS-PNFNLIGVMMISGALLADAVIGNVQEK  211 (367)
T ss_pred             cHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC-CCcceeeHHHHHHHHHHHHHhhHHHHH
Confidence            6556667877777888888899999999999999999999999998773332 233447888777777777766666666


Q ss_pred             hccc--CChHHHHHHHHHHHHHHHHHHHHHhcCCCc-ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHh
Q 015427          285 VSKY--SDPVMATGWHMVIGGLPLMVISVLNHDPVY-GESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLS  361 (407)
Q Consensus       285 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s  361 (407)
                      .++.  .+..++.+|...++.+..+..+...++-.. +..-.+.+.......+..+ +.+.++......-++..++.+++
T Consensus       212 ~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s-~~gylG~~~VLalI~~fGA~~aa  290 (367)
T KOG1582|consen  212 AMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS-LAGYLGIVFVLALIKLFGALIAA  290 (367)
T ss_pred             HHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-HHhHhhHHHHHHHHHHhchhHHH
Confidence            5543  345667788888888888777777665321 1111122333344444333 22344444545567778999999


Q ss_pred             hhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          362 SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       362 ~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      .+....--+++++++++|..+++....-|..+++.|+++-.+.|
T Consensus       291 tvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  291 TVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999999999876655

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.82  E-value=6.6e-08  Score=91.33  Aligned_cols=138  Identities=17%  Similarity=0.054  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhcc--CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--h---------hhHHH-H
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSG--F---------NAWVS-I  180 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~--~---------~~~~~-~  180 (407)
                      ..|.++.++++++|+...+..|...+  +.++...+.+.+..+.++++|+....+......  .         ..... .
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            56889999999999999999998777  789999999999999999998876543211000  0         01111 2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          181 FLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       181 ~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      +..+.......+.+++++++++++..+++...+.|+++.+++++++||+++..+++|..+++.|+.+.....
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            222222222233566789999999999999999999999999999999999999999999999999987643

specificities overlap.

>TIGR00803 nst UDP-galactose transporter

Probab=98.81  E-value=2.7e-08  Score=89.65  Aligned_cols=193  Identities=12%  Similarity=0.001  Sum_probs=122.0

Q ss_pred             hhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCC-----------------CCC-----Ccchh
Q 015427          204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAF-----------------DES-----NSSLW  261 (407)
Q Consensus       204 ~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-----------------~~~-----~~~~~  261 (407)
                      +......++..++++++..+.+.+||++..+++++.+...|+......+.                 ++.     .....
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~   83 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNP   83 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccH
Confidence            33445667778888888888888888888888888888888764322210                 010     11233


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccCChH--HHHHHHHHHHHHHHHHHHHHhcCCCcc-cc-cccCCHHHHHHHHHHH
Q 015427          262 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPV--MATGWHMVIGGLPLMVISVLNHDPVYG-ES-VKELTSSDILALLYTS  337 (407)
Q Consensus       262 ~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~ll~~g  337 (407)
                      ..|....+.+..+-+...++.++..|+.+..  .-.....+.+.+.........+..... .. ....+...|..     
T Consensus        84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  158 (222)
T TIGR00803        84 VVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIV-----  158 (222)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHH-----
Confidence            4677777777777778888888876654321  111111122222212111111111100 00 11122222221     


Q ss_pred             HHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Q 015427          338 IFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV  401 (407)
Q Consensus       338 ~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~  401 (407)
                      +++.+++..+....+++.++...+....++++++.++++++|||+++..+++|+.+++.|+++|
T Consensus       159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2334556667788899999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.78  E-value=2.4e-07  Score=73.43  Aligned_cols=69  Identities=17%  Similarity=0.148  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 015427          182 LFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (407)
Q Consensus       182 ~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  250 (407)
                      ..++++...++.++..++++.|++.+..+.++.++++.+++++++|||++..+++|+.++++|++++..
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            334456666888999999999999999998899999999999999999999999999999999998864

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.74  E-value=6.3e-08  Score=88.13  Aligned_cols=268  Identities=13%  Similarity=0.099  Sum_probs=169.1

Q ss_pred             hchhhHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHH
Q 015427          110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDAS  189 (407)
Q Consensus       110 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  189 (407)
                      +..+...|.++.+.+.++.|....+.|....+...   ...|.             .+...+.. ++  +.+..|.+...
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~~~ra-------------~~gg~~yl-~~--~~Ww~G~ltm~   75 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---SGLRA-------------GEGGYGYL-KE--PLWWAGMLTMI   75 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh---hcccc-------------cCCCcchh-hh--HHHHHHHHHHH
Confidence            34445678888899999999999999886554332   11111             11111111 22  44556666777


Q ss_pred             HHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCCCCCCCcc-h-------h
Q 015427          190 CFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPAFDESNSS-L-------W  261 (407)
Q Consensus       190 ~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~-~-------~  261 (407)
                      ++..+-|.|+.+.|.+..+++-++..++.++++..+++||++....+|.++|++|-.++......+.+.. .       .
T Consensus        76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~  155 (335)
T KOG2922|consen   76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELAT  155 (335)
T ss_pred             HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhc
Confidence            7888889999999999999999999999999999999999999999999999999888776442222111 1       0


Q ss_pred             hhHHHHHH-HHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHH----------HHHHHHhcCCCcccccccCCHHHH
Q 015427          262 GSGEWWML-LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPL----------MVISVLNHDPVYGESVKELTSSDI  330 (407)
Q Consensus       262 ~~G~l~~l-~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  330 (407)
                      ..+++.-. +-.+...+-....|   ++.....+..|..+.+.+-.          ..+-....+..     ....+..|
T Consensus       156 ~~~Fliy~~~iil~~~il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~-----ql~~~~ty  227 (335)
T KOG2922|consen  156 EPGFLVYVIIIILIVLILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN-----QLFYPLTW  227 (335)
T ss_pred             CccHHHHHHHHHHHHHHHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc-----ccccHHHH
Confidence            12222111 11111111112222   22222223334444333311          11111222221     12234455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhh-hhHHHHHHHHHHHhCCC--CCHH----HHHHHHHHHHHHHHhcc
Q 015427          331 LALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGET--FSPL----QLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       331 ~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~-~~pv~a~i~~~~~~~e~--~~~~----~~iG~~lil~g~~l~~~  403 (407)
                      ..++.+ +.|...+....++|++..+++.++++.| +-..+++.-+.++|+|.  .+..    .+.|...++.|++++..
T Consensus       228 ~~~l~~-~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~  306 (335)
T KOG2922|consen  228 IFLLVV-ATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHR  306 (335)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeee
Confidence            555544 3556667667799999999999999888 67788889999999986  3333    47889999999999876


Q ss_pred             cC
Q 015427          404 RG  405 (407)
Q Consensus       404 ~~  405 (407)
                      .|
T Consensus       307 ~k  308 (335)
T KOG2922|consen  307 TK  308 (335)
T ss_pred             ec
Confidence            55

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.73  E-value=8e-07  Score=83.03  Aligned_cols=136  Identities=24%  Similarity=0.306  Sum_probs=108.8

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHH-HHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAA-FRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~-~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      ...|.++.+.+++.|+...+..|... +.++..... +.+....+...+....... .+...+.+......+++....++
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~  229 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAY  229 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHH
Confidence            35789999999999999999998766 666666665 4444233333333222222 34555778888888888877789


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      .++++++++.+++.++++..+.|++..++++++++|+++..+++|..+++.|+.+....
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         230 LLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999998754

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.73  E-value=5.7e-07  Score=71.25  Aligned_cols=68  Identities=10%  Similarity=0.128  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          336 TSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       336 ~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      .++++.++++.++..++++.|.+++.++.++.++++.++++++|||+++..+++|.+++++|++++..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34466778899999999999999999999999999999999999999999999999999999998765

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.72  E-value=1.3e-07  Score=75.48  Aligned_cols=106  Identities=17%  Similarity=0.433  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHH
Q 015427          297 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF  376 (407)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~  376 (407)
                      +....+.+....+....++...  .........+.+.+..|+++...++.+++.++++.+ +.++++..+.|+++.+++.
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRD--LFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHH--HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            3445555555555555433210  011122244555666677777788999999999999 5888999999999999999


Q ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          377 LYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       377 ~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +++||+++..+++|.+++++|++++...+
T Consensus        80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   80 LFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999988654

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.68  E-value=1.9e-07  Score=82.92  Aligned_cols=251  Identities=13%  Similarity=0.083  Sum_probs=161.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCC-CCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhhHHHHhhcHHHHHHHH
Q 015427          144 TFFVAAFRLIPAGLLLITFASSQGR-KLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRT-SAGLGSVIIDSQPLSVAVL  221 (407)
Q Consensus       144 p~~~~~~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~s~a~~i~~~~p~~~~ll  221 (407)
                      -..+++.++++-+.--+++.-.... +.+.+.+++   ..... ..++.+.+-++++++- +.-.=.++.+-.++.++++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y---~i~V~-mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDY---AITVA-MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eeehHHHHHHHHHHhceeeeccccccCCCCchhhh---heehh-eeeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            4567888888887766665411111 111122222   22222 2333556778898884 4443345588899999999


Q ss_pred             HHHHcCCcchHHHHHHHHHHHHHHHHhhcCCC---CC-----------CCcchhhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 015427          222 AALLFGESIGLVGAGGLVLGVIGLLLLEAPAF---DE-----------SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK  287 (407)
Q Consensus       222 a~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~---~~-----------~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~~  287 (407)
                      +++++|+|.+..|+.++++.-+|+++.+....   ..           .+...+..|+.+...+-+..|.-.++++..-+
T Consensus       109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~  188 (330)
T KOG1583|consen  109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ  188 (330)
T ss_pred             HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998876431   11           11223567887777777777777666655333


Q ss_pred             --cCChHHHHHHHHHHHHHHHHHHH--------HHhcCC-CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH----h
Q 015427          288 --YSDPVMATGWHMVIGGLPLMVIS--------VLNHDP-VYGESVKELTSSDILALLYTSIFGSAISYGVYFYS----A  352 (407)
Q Consensus       288 --~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~~a----l  352 (407)
                        ..++-+.++|..+++....+...        .....+ ..-+.....-+..|.+++.    ....+|.| .++    -
T Consensus       189 kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~----n~L~Qy~C-ikgVy~L~  263 (330)
T KOG1583|consen  189 KYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF----NVLTQYFC-IKGVYILT  263 (330)
T ss_pred             HhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH----HHHHHHHH-HHhhhhhh
Confidence              24677888888887665444321        001111 0000011112334443332    23335544 333    3


Q ss_pred             ccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          353 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       353 ~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      .+.++.+++++..+.-.++.+++++.|+.++++.-|+|++++..|.+++..
T Consensus       264 te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  264 TETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             ceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            355778899999999999999999999999999999999999999998763

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.66  E-value=7.2e-07  Score=78.45  Aligned_cols=138  Identities=12%  Similarity=0.041  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015427          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      -+..|..+.+.+..+|..+.+..|.+.+..+-..-+..-+.++.++.+|+-.......-..+.-....+..+++...+-|
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccch
Confidence            34678899999999999999999988767776777889999999999999887665555566667777888889999999


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  250 (407)
                      .+-..++++.|...-.++.+++|.+.++.++++++|+++..||+++..++.+.+=.+.
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999999999999999999999999999999999999888764443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.61  E-value=2e-06  Score=82.76  Aligned_cols=135  Identities=13%  Similarity=0.085  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccC-------cCHHHHHHHHHHHHHHHHHHHHHHhCCCC-C---------CCh---
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPK-------AGTFFVAAFRLIPAGLLLITFASSQGRKL-P---------SGF---  174 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~-------~~p~~~~~~r~~~~~l~~~~~~~~~~~~~-~---------~~~---  174 (407)
                      ..|.++.++++++|+...+..|...++       .++.....+...++.++++|+....+... .         ...   
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            568999999999999999999887753       55776777778888888888776432210 0         000   


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 015427          175 NAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (407)
Q Consensus       175 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  249 (407)
                      ......++...+.....+.+.+++++++++..+++...+.|+++.+++++++||+++..+++|.+++++|+.+-.
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            111122223333333334444579999999999999999999999999999999999999999999999998864

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.61  E-value=1.3e-06  Score=70.92  Aligned_cols=121  Identities=17%  Similarity=0.113  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 015427          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFL  195 (407)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  195 (407)
                      .++++.+++.++-+...++.|...++.+........  ...+.    ..          ......+..|+++..+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~~~~----~~----------~~p~~~i~lgl~~~~la~~~w   65 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IAALL----AF----------GLALRAVLLGLAGYALSMLCW   65 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HHHHH----HH----------hccHHHHHHHHHHHHHHHHHH
Confidence            367788888888888899999887766533322111  00000    00          111124667777778889999


Q ss_pred             HHHhhccchhhHHHHhhcHHHHHHHHHHH--HcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          196 AQGLQRTSAGLGSVIIDSQPLSVAVLAAL--LFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       196 ~~al~~~~~s~a~~i~~~~p~~~~lla~l--~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      .+++++.+++.+..+.+..+.++.+.++.  ++||+++..+++|+.++++|+.++..++
T Consensus        66 ~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         66 LKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999999999889888885  8999999999999999999999998654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.59  E-value=9.3e-07  Score=82.85  Aligned_cols=129  Identities=14%  Similarity=0.007  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHH----HHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLI----PAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC  190 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  190 (407)
                      .+|+++.+++.+.|+.+....|..  +.+|...++....    .+.++..++  . +. .+...+..+..++.|++ ..+
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~~~Gi~-~~i  223 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH--I-LA-KPLKKYAILLNILPGLM-WGI  223 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH--h-cc-cchHHHHHHHHHHHHHH-HHH
Confidence            569999999999999999999975  4788887555554    333333333  1 11 22233455556668887 477


Q ss_pred             HHHHHHHHhh-ccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHH----HHHHHHHHHHHHhhc
Q 015427          191 FQGFLAQGLQ-RTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGA----GGLVLGVIGLLLLEA  250 (407)
Q Consensus       191 ~~~~~~~al~-~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~----~~~~l~~~Gv~l~~~  250 (407)
                      ++.+++.+.+ +.+++.+.++...+|+...+++.+++||+.++.++    +|.++.+.|+.++..
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            8889999999 99999999999999999999999999999999999    999999999998753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.57  E-value=1.5e-06  Score=78.49  Aligned_cols=139  Identities=14%  Similarity=0.205  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 015427          262 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS  341 (407)
Q Consensus       262 ~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~  341 (407)
                      ..|+++++.+-+.|+.-..+.|.+ +..++.++..+..+.+...+........+.....+ ...++..+......++. .
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~l-i   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTALL-I   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHHH-H
Confidence            369999999999999999999877 66789999999999998888877766655432111 12345566655555544 5


Q ss_pred             HHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          342 AISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       342 ~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      ..++..|.+|....+...+|...+++|++.+++|.+++||+++..|++..++..+|+.....
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            66889999999999999999999999999999999999999999999999999999987654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.49  E-value=7.4e-06  Score=69.01  Aligned_cols=130  Identities=20%  Similarity=0.201  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccC-------cCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--------C-----Chhh
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPK-------AGTFFVAAFRLIPAGLLLITFASSQGRKLP--------S-----GFNA  176 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~-------~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~--------~-----~~~~  176 (407)
                      |.++.+.+.++.+...+..|...++       .++.++.......+.+++++.+...+....        .     ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4577889999999999999876543       679999999999999999998776654330        0     1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 015427          177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL  247 (407)
Q Consensus       177 ~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l  247 (407)
                      +..++..|++.. ..+.+.+..++++++...+++...-.+++.++++++++|+++..+++|++++++|+.+
T Consensus        81 ~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            444555555554 4667889999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=98.10  E-value=0.0089  Score=55.87  Aligned_cols=287  Identities=13%  Similarity=0.093  Sum_probs=178.2

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCChhhHHHHHHHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL------PSGFNAWVSIFLFALVD  187 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~  187 (407)
                      -..|+++-.+..++-++.++-.|.. ++.+-...=.+..+++.++.-.....-..+.      ..+.....+..+.|++.
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lW   83 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLW   83 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHH
Confidence            4678888889999999888888874 5555333344445555554433332222111      22335677778889888


Q ss_pred             HHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcC-------CcchHHHHHHHHHHHHHHHHhhcCCC------
Q 015427          188 ASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFG-------ESIGLVGAGGLVLGVIGLLLLEAPAF------  253 (407)
Q Consensus       188 ~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~-------e~~~~~~~~~~~l~~~Gv~l~~~~~~------  253 (407)
                      ..+ ...|=.+++|+.++...-| ..+.-++-.++-.++.+       ++-.....+|++++++|+++....+.      
T Consensus        84 GIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~  162 (344)
T PF06379_consen   84 GIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKEL  162 (344)
T ss_pred             hcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhh
Confidence            664 4588899999999988844 66666666666555543       23345789999999999999977541      


Q ss_pred             -CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhc--------ccCChHH----HHHHHHHHHHHHHHHHHHHhcC--CCc
Q 015427          254 -DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVS--------KYSDPVM----ATGWHMVIGGLPLMVISVLNHD--PVY  318 (407)
Q Consensus       254 -~~~~~~~~~~G~l~~l~sa~~~a~~~v~~r~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~  318 (407)
                       ++.+.....+|.++++++++.-+..++-...-.        ...++..    .....+.-+.+..+.++++...  ...
T Consensus       163 ~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~  242 (344)
T PF06379_consen  163 GEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNW  242 (344)
T ss_pred             ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCC
Confidence             111223456999999999999999988654321        1112221    2233444556666677665422  111


Q ss_pred             --ccccc--cC-CHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----hhhHhhhhhhhHHHHHHHHHHHhCCC------C
Q 015427          319 --GESVK--EL-TSSDILALLYTSIFGSAISYGVYFYSATKGS----LTKLSSLTFLTPMFASIFGFLYLGET------F  383 (407)
Q Consensus       319 --~~~~~--~~-~~~~~~~ll~~g~~~~~~~~~l~~~al~~~~----~~~~s~~~~~~pv~a~i~~~~~~~e~------~  383 (407)
                        ..+..  .. -.......+..|++ =..++.+|-++-.+.+    ..--.+.+.+..+++-++|++ ++|.      .
T Consensus       243 s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt  320 (344)
T PF06379_consen  243 SWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASKKT  320 (344)
T ss_pred             ccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCccc
Confidence              01111  11 12233333333332 3446666666655554    455667788889999999997 5653      3


Q ss_pred             CHHHHHHHHHHHHHHHHhccc
Q 015427          384 SPLQLVGAAVTVVAIYLVNFR  404 (407)
Q Consensus       384 ~~~~~iG~~lil~g~~l~~~~  404 (407)
                      -..-++|.++++.++.++-+.
T Consensus       321 ~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  321 IRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc
Confidence            345588999999998887654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.09  E-value=7.2e-05  Score=68.08  Aligned_cols=129  Identities=15%  Similarity=-0.023  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHH
Q 015427          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  192 (407)
                      +..++++.++++.+.|..+..+.|.  .+++++...+-+.+-..+....+....  +.+...+..++-++.|++... ++
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k~~~~nil~G~~w~i-gn  209 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEKKSWKNILTGLIWGI-GN  209 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhcc--cccccccchHHhhHHHHHHHH-HH
Confidence            4467889999999999999999887  457887777665554444444444433  223333556667788887655 66


Q ss_pred             HHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHH----HHHHHHHHHH
Q 015427          193 GFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAG----GLVLGVIGLL  246 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~----~~~l~~~Gv~  246 (407)
                      .+++.|.+....+.+..+..+.++.+.+.+.+++||+-+++++.    |+++.+.|.+
T Consensus       210 l~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  210 LFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            79999999999999999999999999999999999998888764    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.06  E-value=0.00013  Score=68.98  Aligned_cols=140  Identities=10%  Similarity=0.026  Sum_probs=107.9

Q ss_pred             hhhHHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC----CCChhhHHHHHHHHHHH
Q 015427          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL----PSGFNAWVSIFLFALVD  187 (407)
Q Consensus       112 ~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~  187 (407)
                      .+..+|-++++.+++++|..++..+...++.|+.+...+--+++.++..+....-++..    ..+.+....++.. .++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~-~~~  242 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY-ALC  242 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH-HHH
Confidence            35688999999999999999999999889999888888777788887776665433221    2232333322222 334


Q ss_pred             HHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       188 ~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      .+..+.+.-..++..++....+=.-++.++..+.+.+++|+++++..++|.+++++|.++....+
T Consensus       243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            45566666777888888877777788899999999999999999999999999999999987654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.97  E-value=0.00032  Score=55.24  Aligned_cols=68  Identities=21%  Similarity=0.273  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      +.+..+++.++..++++.|.+.+..+ ....-+.+.+++++++||+++..+++|+.++++|++++...+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44445577788999999999999988 668999999999999999999999999999999999997543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.95  E-value=8e-05  Score=58.62  Aligned_cols=68  Identities=9%  Similarity=0.171  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHhccCChhhHhhh-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          338 IFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       338 ~~~~~~~~~l~~~al~~~~~~~~s~~-~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +++.++++.++.+++++.|.+.+-.+ ..+..+.+.+.++++|||++++.+++|.++|+.|+++++..+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45566778888999999999877666 558899999999999999999999999999999999998744

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.90  E-value=9.8e-05  Score=58.89  Aligned_cols=68  Identities=21%  Similarity=0.311  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHhccCChhhHhhh-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          338 IFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       338 ~~~~~~~~~l~~~al~~~~~~~~s~~-~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +++.++++.++.+++++.+.+.+-.+ ..+..+.+.+.++++|||+++..+++|.++|++|++.++...
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            45567788899999999999887766 468999999999999999999999999999999999987643

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.79  E-value=6.6e-05  Score=58.88  Aligned_cols=109  Identities=17%  Similarity=0.028  Sum_probs=77.3

Q ss_pred             HHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015427          123 SPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRT  202 (407)
Q Consensus       123 ~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~  202 (407)
                      +..++||+.+++.|...++.++..-.. |..-....    .          ...+ ++.+.=+++.. +.+.|++.+.+.
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~----L----------l~n~-~y~ipf~lNq~-GSv~f~~~L~~~   65 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF----L----------LLNP-KYIIPFLLNQS-GSVLFFLLLGSA   65 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH----H----------HHhH-HHHHHHHHHHH-HHHHHHHHHhcC
Confidence            457899999999998877655333221 32211111    0          0112 22333333444 556889999999


Q ss_pred             chhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHh
Q 015427          203 SAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (407)
Q Consensus       203 ~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  248 (407)
                      +.+.+.++ +++.=+++++.++++.+|..++..++|+.++++|+.+.
T Consensus        66 dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   66 DLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             CceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999988 68999999999988888888889999999999998764

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.78  E-value=0.00075  Score=55.62  Aligned_cols=129  Identities=15%  Similarity=0.073  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHhhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCC-CCChhhHHHHHHHHHHHHHHHHHHH
Q 015427          118 WAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFL  195 (407)
Q Consensus       118 ~l~~~~~~~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~  195 (407)
                      .++.+.+..+-+....++-.+.+..+ |+..+++.+..+.+.+..+....+++. ...++..++.++-|.++.. ...+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~-~V~~~   81 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVF-FVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHH-HHHHH
Confidence            44566777777888888876677776 999999999999999988887776642 2222334455556666544 66688


Q ss_pred             HHHhhccchhhHHHH-hhcHHHHHHHHHHH----HcCCcchHHHHHHHHHHHHHHHH
Q 015427          196 AQGLQRTSAGLGSVI-IDSQPLSVAVLAAL----LFGESIGLVGAGGLVLGVIGLLL  247 (407)
Q Consensus       196 ~~al~~~~~s~a~~i-~~~~p~~~~lla~l----~l~e~~~~~~~~~~~l~~~Gv~l  247 (407)
                      .+...+.+++.+..+ ..-+-+...+++.+    .-+++++..+.+|+++.++|+.+
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            899999999999966 55567777777765    35789999999999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.76  E-value=0.0002  Score=55.14  Aligned_cols=66  Identities=27%  Similarity=0.335  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          186 VDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       186 ~~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      ++...++.++-.+++++|++.+..+ .....+.+++.+++++||+++..+++++.+.++|++.+...
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            3445577788999999999999977 88999999999999999999999999999999999988653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.73  E-value=0.00037  Score=55.65  Aligned_cols=69  Identities=26%  Similarity=0.372  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          184 ALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       184 g~~~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      .+.+...++.++..++++.|.+.+..+ ....-+.+++++.+++||+++..+++|+.++++|++++...+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344455577799999999999999988 579999999999999999999999999999999999987644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.73  E-value=0.00032  Score=54.09  Aligned_cols=68  Identities=18%  Similarity=0.256  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHhccCChhhH-hhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          339 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       339 ~~~~~~~~l~~~al~~~~~~~~-s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      ++..++|.+..+++|+.|.+++ ++-.-...+.+.+.++++|||++++.+++|.+++++|++.++...+
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s~  106 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGSR  106 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcCC
Confidence            4456678889999999998755 5556688899999999999999999999999999999999887653

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.73  E-value=0.00031  Score=54.74  Aligned_cols=68  Identities=21%  Similarity=0.260  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHhccCChhhH-hhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          338 IFGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       338 ~~~~~~~~~l~~~al~~~~~~~~-s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +++.+++|.+..+++|+.|.+.+ ++-..+..+.+.+.++++|||++++.+++|..+++.|++.++..+
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~  104 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST  104 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence            35566778888999999998765 444558899999999999999999999999999999999987654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.72  E-value=0.0013  Score=51.63  Aligned_cols=65  Identities=6%  Similarity=0.099  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHhccCChhhHh-hhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          339 FGSAISYGVYFYSATKGSLTKLS-SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       339 ~~~~~~~~l~~~al~~~~~~~~s-~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      ++.+++|.+..+++|+.|.+.+= +-..+..+.+.+.++++|||++++.+++|.++|+.|++.++.
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl  108 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL  108 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            44566788889999999988654 445588899999999999999999999999999999998764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.69  E-value=0.0012  Score=54.43  Aligned_cols=131  Identities=15%  Similarity=0.119  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 015427          264 GEWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA  342 (407)
Q Consensus       264 G~l~~l~sa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~  342 (407)
                      ..++++++++.-++...+.-++.++.+ ++......+..+.+......++.+++..    .......|+  .++|.+..+
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~----~~~~~~p~w--~~lGG~lG~   75 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSL----ASLSSVPWW--AYLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc----chhccCChH--HhccHHHHH
Confidence            357889999999999999999888876 9999999999999999888888776522    111222222  223444455


Q ss_pred             HHHHHHHHHhccCChhhHhhhh-hhhHHHHHHHHHH----HhCCCCCHHHHHHHHHHHHHHHH
Q 015427          343 ISYGVYFYSATKGSLTKLSSLT-FLTPMFASIFGFL----YLGETFSPLQLVGAAVTVVAIYL  400 (407)
Q Consensus       343 ~~~~l~~~al~~~~~~~~s~~~-~~~pv~a~i~~~~----~~~e~~~~~~~iG~~lil~g~~l  400 (407)
                      ....+.....++.+++...... .-|.+.+++++.+    .-++++++.+++|.++++.|+++
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5556678888999887665554 4788888899986    23577999999999999999864

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.68  E-value=0.0011  Score=62.69  Aligned_cols=134  Identities=14%  Similarity=0.170  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhcc--CcCHHHHHHHHHHHHHHHHHHHHHH--hCCCCC------CChhhHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASS--QGRKLP------SGFNAWVSIFLFALV  186 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~--~~~~~~------~~~~~~~~~~~~g~~  186 (407)
                      |+++++++.++-|...+..+...+  +.++.+..+....++.+...+.+..  .+...+      ..+..+..+++..+.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            899999999999999999987776  4669999999999999988877766  322111      122344445555554


Q ss_pred             HHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          187 DASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       187 ~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      + ..++.+.+.-.++.++...+++..+--+++.+++.++++++++..+|+|+++.+.|..+=..+
T Consensus       235 ~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  235 G-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             H-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            4 445667778889999999999999999999999999999999999999999999999886654

; GO: 0055085 transmembrane transport

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.66  E-value=0.0017  Score=50.94  Aligned_cols=63  Identities=17%  Similarity=0.216  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 015427          187 DASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (407)
Q Consensus       187 ~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  249 (407)
                      +...++.+...++++.|++.+..+ .....+.+.+.+.+++||+++..+++++.+++.|++++.
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            344567788999999999999977 678899999999999999999999999999999999863

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.60  E-value=0.00063  Score=52.99  Aligned_cols=66  Identities=20%  Similarity=0.229  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 015427          185 LVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (407)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  250 (407)
                      +.+...++.+...++++.|.+.+..+ .....+.+.+.+.+++||+++..+++++.++++|++.+..
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            33445567788999999999999977 6699999999999999999999999999999999998753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.51  E-value=0.00065  Score=63.72  Aligned_cols=118  Identities=14%  Similarity=0.133  Sum_probs=85.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 015427          260 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  339 (407)
Q Consensus       260 ~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~  339 (407)
                      ++.+|..+++.++++.+....+.|+...+.+....-.                  +..   ...-.....|+    .|.+
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~------------------~~~---~~~~l~~~~W~----~G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA------------------GSG---GRSYLRRPLWW----IGLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc------------------cch---hhHHHhhHHHH----HHHH
Confidence            3568999999999999999999998644432100000                  000   00000111222    2233


Q ss_pred             HHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          340 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       340 ~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      ..+++..+...|+...|++.++++..+..++..+++..++||+++..+++|.++++.|..++.
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            345566677889999999999999999999999999999999999999999999999997654

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.34  E-value=0.0001  Score=65.63  Aligned_cols=135  Identities=14%  Similarity=0.102  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCChhhHHHHHHHHHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ-GRKLPSGFNAWVSIFLFALVDASCFQG  193 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (407)
                      .++....+.++++-+...++.|...++.+.......-.+++.+..++.+..- .-..|...++|+....+|+++. ++++
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgf-igQI  268 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGF-IGQI  268 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhh-HHHH
Confidence            3346667777888888888888887765532222222233333322222222 3344667788888888999874 4888


Q ss_pred             HHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 015427          194 FLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (407)
Q Consensus       194 ~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  250 (407)
                      +...++|.--++..++.+++..++..+.-.++++|.++.+.|.|+++++...+.+..
T Consensus       269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            999999999999999999999999999999999999999999999888776666554

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.32  E-value=0.0036  Score=59.39  Aligned_cols=141  Identities=13%  Similarity=0.059  Sum_probs=96.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHH
Q 015427          261 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFG  340 (407)
Q Consensus       261 ~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~  340 (407)
                      ...|+++.++++++++..++-.|+. ++-+-...=....++..++.....-....+.+.....+.+...+..-+..|++ 
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~-   82 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV-KKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL-   82 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH-
Confidence            4579999999999999999999994 44342222111111222222211111222322223344567677766656644 


Q ss_pred             HHHHHHHHHHHhccCChhhHhhhhh-hhHHHHHHHHHHHhCCCC---C----HHHHHHHHHHHHHHHHhcc
Q 015427          341 SAISYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETF---S----PLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       341 ~~~~~~l~~~al~~~~~~~~s~~~~-~~pv~a~i~~~~~~~e~~---~----~~~~iG~~lil~g~~l~~~  403 (407)
                      =.+++..+..++++.+.+...++.. ++-+.+.+++.+++||-.   +    ..-.+|.+++++|+.+..+
T Consensus        83 W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         83 WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            5668889999999999998888776 899999999999999765   2    3458899999999999887

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.30  E-value=0.0026  Score=48.64  Aligned_cols=55  Identities=20%  Similarity=0.237  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHH
Q 015427          187 DASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLG  241 (407)
Q Consensus       187 ~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~  241 (407)
                      +...++.++..++++.|.+.+..+ ..+..+.+.+.+.+++||+++..+++|+.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            445577799999999999999877 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.19  E-value=0.0057  Score=57.45  Aligned_cols=141  Identities=11%  Similarity=0.050  Sum_probs=108.8

Q ss_pred             hhhHHHHHHHHHHHHHHHhHHHHHHhhccC----cCHHHHHHHHHHHHHHHHHHHH----HHhCCCCC-CChhhHHHHHH
Q 015427          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPK----AGTFFVAAFRLIPAGLLLITFA----SSQGRKLP-SGFNAWVSIFL  182 (407)
Q Consensus       112 ~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~----~~p~~~~~~r~~~~~l~~~~~~----~~~~~~~~-~~~~~~~~~~~  182 (407)
                      .+...|-++.++++++||.+.++.|.-.++    +|--.+..+--++..++++|..    +....+.. ++..+...+++
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVF  322 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence            456889999999999999999999765442    4533333333445555555433    22223332 33356666777


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          183 FALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       183 ~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      .++++..++-.++..|.-.+++-.+++-..++..+.++...++-+.+++...++|.+.+++|-+++...+
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            8888888888999999999999999998999999999999999999999999999999999999998876

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.09  E-value=0.0059  Score=46.63  Aligned_cols=56  Identities=20%  Similarity=0.284  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHhccCChhhHhhh-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 015427          339 FGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVT  394 (407)
Q Consensus       339 ~~~~~~~~l~~~al~~~~~~~~s~~-~~~~pv~a~i~~~~~~~e~~~~~~~iG~~li  394 (407)
                      .+.++++.++.+++|+.+.+.+-++ ..+..+...+.+.++|||+++..+++|..+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            4566778899999999999988554 5599999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.90  E-value=0.043  Score=45.35  Aligned_cols=139  Identities=12%  Similarity=0.135  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 015427          263 SGEWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS  341 (407)
Q Consensus       263 ~G~l~~l~sa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~  341 (407)
                      ...+.+++++.+-.+..-+.-++.+..+ |.......+..+.+.+..+.++.++.....  ...+...|.++.  |+++ 
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~pwW~~~G--G~lG-   79 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAPWWAWIG--GLLG-   79 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCchHHHHc--cchh-
Confidence            4677888888888888888888777665 777777777788887777777754432211  111222233222  2222 


Q ss_pred             HHHHHHHHHHhccCCh-hhHhhhhhhhHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          342 AISYGVYFYSATKGSL-TKLSSLTFLTPMFASIFGFLYLG----ETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       342 ~~~~~l~~~al~~~~~-~~~s~~~~~~pv~a~i~~~~~~~----e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      ++--..-.....+.++ .+....-.-|.+.+++++.+=+.    .+++...++|++++++|+++..+.++
T Consensus        80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~~  149 (150)
T COG3238          80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFGA  149 (150)
T ss_pred             hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence            2222233445556555 46666777889999999887544    67999999999999999777766654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.75  E-value=0.071  Score=44.10  Aligned_cols=133  Identities=14%  Similarity=0.074  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhccCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--hhhHHHHHHHHHHHHHHHH
Q 015427          116 LEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSG--FNAWVSIFLFALVDASCFQ  192 (407)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~~~k~~~~~~~-p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~  192 (407)
                      ..++..+.+..+-.....++-.+.+..+ |....++.+..+.+++..+...+.++.+..  .+..++.++.|.++.. ..
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~-~v   83 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAI-FV   83 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhh-hh
Confidence            3455556666666777777755556555 999999999999998888777754444332  3445566666655433 44


Q ss_pred             HHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHc----CCcchHHHHHHHHHHHHHHHHhh
Q 015427          193 GFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLF----GESIGLVGAGGLVLGVIGLLLLE  249 (407)
Q Consensus       193 ~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l----~e~~~~~~~~~~~l~~~Gv~l~~  249 (407)
                      ..-.....+..++....+ ..-+-+...++..+=+    +++++..+++|+++.++|+.++.
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            444556666666666644 5556666666665544    37889999999999999955554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.75  E-value=0.009  Score=54.38  Aligned_cols=66  Identities=20%  Similarity=0.248  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhccc
Q 015427          339 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR  404 (407)
Q Consensus       339 ~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~  404 (407)
                      +.-.++..+.+.++++.+|++..++..++.+++.+++++++|++++..||++..+..+|+.++...
T Consensus        25 ~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   25 LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence            346667888899999999999999999999999999999999999999999999999999987654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.69  E-value=0.024  Score=51.93  Aligned_cols=137  Identities=16%  Similarity=0.180  Sum_probs=108.8

Q ss_pred             hhhHHHHHHHHHHHHHHHhHHHHHHhhccC--cCHHHHHHHHHHHHHHHHHHHHHHhCCCCC------CChhhHHHHHHH
Q 015427          112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKLP------SGFNAWVSIFLF  183 (407)
Q Consensus       112 ~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~--~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~  183 (407)
                      .++..|++++....++=|..+...+.+.+.  ++++++.+.-.++..+....+....+.-.+      ..++-++-++++
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~  247 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY  247 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence            356789999999999889888888776664  779999888888888887777655544321      234556666777


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 015427          184 ALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (407)
Q Consensus       184 g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  249 (407)
                      +.++ +.++.+.|+-++.-.+-.-++|+-+--+++.+++.+.++.+++..+|+|+.+.++|+.+=.
T Consensus       248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHH
Confidence            7765 4477788889988877777788888999999999999999999999999999999987643

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.62  E-value=0.0073  Score=56.64  Aligned_cols=136  Identities=15%  Similarity=0.167  Sum_probs=107.9

Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHhhcc----CcCHHHHHHHHHHHHHHHHH-HHHHHhCCCCC-------CChhhHHHHH
Q 015427          114 MLLEWAVLVSPFFFWGTAMVAMKEVLP----KAGTFFVAAFRLIPAGLLLI-TFASSQGRKLP-------SGFNAWVSIF  181 (407)
Q Consensus       114 ~~~~~l~~~~~~~~~~~~~~~~k~~~~----~~~p~~~~~~r~~~~~l~~~-~~~~~~~~~~~-------~~~~~~~~~~  181 (407)
                      ...|.+..+++.+..+...++.|....    ++++..+.....-++.++++ |+....+....       .... ...+.
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            478999999999999999999987773    48899999888888888888 88776544322       2222 33344


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          182 LFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       182 ~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      +...+.+. .+...|..+.++++-.-++...+--.++...++++++++++..+.+|..++++|+.+=..-
T Consensus       240 ~~sv~~f~-~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  240 LNSVLAFL-LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA  308 (316)
T ss_pred             HHHHHHHH-HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence            44455444 4567889999999998888888888888899999999999999999999999999986543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.62  E-value=0.079  Score=48.20  Aligned_cols=166  Identities=15%  Similarity=0.115  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (407)
                      |++..+++.+++|++++-.|.. +.-|++.+-++-.....+.-+......+.+     +-..+.++-|.+... ++.+..
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p-----~f~p~amlgG~lW~~-gN~~~v   73 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGFP-----PFYPWAMLGGALWAT-GNILVV   73 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCCC-----cceeHHHhhhhhhhc-Cceeeh
Confidence            4567889999999999999974 455676666665555555555554443322     223345556666544 677889


Q ss_pred             HHhhccchhhHHHHhhcHHHHHHHH-HHH-HcCCc-----chHHHHHHHHHHHHHHHHhhcCCCC---------------
Q 015427          197 QGLQRTSAGLGSVIIDSQPLSVAVL-AAL-LFGES-----IGLVGAGGLVLGVIGLLLLEAPAFD---------------  254 (407)
Q Consensus       197 ~al~~~~~s~a~~i~~~~p~~~~ll-a~l-~l~e~-----~~~~~~~~~~l~~~Gv~l~~~~~~~---------------  254 (407)
                      -.++....+....+-++.-+++--. +++ +++++     -+...++|++++++|..+...-..+               
T Consensus        74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~  153 (254)
T PF07857_consen   74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSI  153 (254)
T ss_pred             hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccc
Confidence            9999999999999977655544433 332 34332     2466788999999998877542100               


Q ss_pred             --------C-------CCc------chhhhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 015427          255 --------E-------SNS------SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS  289 (407)
Q Consensus       255 --------~-------~~~------~~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~  289 (407)
                              +       +..      ..+..|..+++++++.|+...+=..+++++.
T Consensus       154 ~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  154 EDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             ccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence                    0       000      0255799999999999998877666655443

The region concerned is approximately 280 residues long.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.41  E-value=0.017  Score=45.46  Aligned_cols=108  Identities=16%  Similarity=0.155  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 015427          270 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF  349 (407)
Q Consensus       270 ~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~l~~  349 (407)
                      +-++.|++.+-+.|+..+..+...... +.+-....     +            -.++..+...     .....+-..|+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~-----L------------l~n~~y~ipf-----~lNq~GSv~f~   59 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF-----L------------LLNPKYIIPF-----LLNQSGSVLFF   59 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH-----H------------HHhHHHHHHH-----HHHHHHHHHHH
Confidence            446788999999999766544332221 11111111     0            0122233222     22334556778


Q ss_pred             HHhccCChhhHhhh-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 015427          350 YSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL  400 (407)
Q Consensus       350 ~al~~~~~~~~s~~-~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l  400 (407)
                      ..+.+.+-+.+.++ +.+.-+++.+.++++.+|..+...++|.+++++|+.+
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            88999999999888 5899999999999888888899999999999999865

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=96.14  E-value=0.064  Score=48.08  Aligned_cols=59  Identities=12%  Similarity=0.015  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 015427          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLL  247 (407)
Q Consensus       189 ~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l  247 (407)
                      +.+..+..+.+++.+....++...+.++++.+++.++++|+++..+++|+.+.+.|+.+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            44556788899999999999999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.96  E-value=0.0053  Score=54.37  Aligned_cols=132  Identities=20%  Similarity=0.226  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 015427          264 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI  343 (407)
Q Consensus       264 G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~~~~  343 (407)
                      +++.+++=++.|+..-....+...  +|.+-+.-.. +++++.....++...|       ..+...+..-+.-|++ =.+
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG--~p~qQ~lGtT-~GALifaiiv~~~~~p-------~~T~~~~iv~~isG~~-Ws~   71 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG--KPYQQTLGTT-LGALIFAIIVFLFVSP-------ELTLTIFIVGFISGAF-WSF   71 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC--ChhHhhhhcc-HHHHHHHHHHheeecC-------ccchhhHHHHHHhhhH-hhh
Confidence            578899999999988777666543  3444333333 3444444333333333       2344444434444433 445


Q ss_pred             HHHHHHHHhccCChhhHhhhhh-hhHHHHHHHHHHHhCCCCCHHH----HHHHHHHHHHHHHhcccCC
Q 015427          344 SYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       344 ~~~l~~~al~~~~~~~~s~~~~-~~pv~a~i~~~~~~~e~~~~~~----~iG~~lil~g~~l~~~~~~  406 (407)
                      ++..++++++..+.+++.++.. +|-+-+.++++++|||..++.+    .+..++++.|+++..++++
T Consensus        72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            7778899999999999999987 8999999999999999998776    3455788899988877664

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.73  E-value=0.42  Score=45.04  Aligned_cols=136  Identities=13%  Similarity=0.105  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccC----ChHHHHHHHHHHHHHHHHHHHHHhcCC---Ccc---cccccCCHHHHHHHHH
Q 015427          266 WWMLLAAQSMAVGTVMVRWVSKYS----DPVMATGWHMVIGGLPLMVISVLNHDP---VYG---ESVKELTSSDILALLY  335 (407)
Q Consensus       266 l~~l~sa~~~a~~~v~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~ll~  335 (407)
                      +..+...+-.+......|+..++.    .+.+..+..=++-.+++....+...+.   ...   ......++.+..-+..
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            344444455555555566544332    344444444445555555555544311   000   0111112212222221


Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          336 TSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       336 ~g~~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      = .+.-++++.+++.++.+.+|++..+...++.+.+.++..++++++++..||...++...|+.++.
T Consensus        98 P-a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   98 P-ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             H-HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            2 23355677788999999999999999999999999999999999999999999999999999887

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.62  E-value=0.33  Score=45.04  Aligned_cols=136  Identities=13%  Similarity=0.072  Sum_probs=103.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhcc--CcCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CCChhhHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKL--------PSGFNAWVSIFLFA  184 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~g  184 (407)
                      ..|+.++....+.-....+..|+..+  +.+-+.+.+...++..+.+....+..+...        ......+..+.+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            44788888888888888888887776  456788888888888888877775554311        12224456667777


Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          185 LVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       185 ~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      +++..+++ +.+++.+..++...++.-...-..+.+...++.++++++...+|+.++++|-++=.+.
T Consensus       236 v~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~  301 (314)
T KOG1444|consen  236 VMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA  301 (314)
T ss_pred             HHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence            77777665 7789999999888888887777778888888888999999999999999998776543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.43  E-value=0.032  Score=47.72  Aligned_cols=61  Identities=18%  Similarity=0.348  Sum_probs=56.6

Q ss_pred             HHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          345 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       345 ~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      ..+|..|+++.+|+.++.+..-+-.+..+++++++|+++....++.+++.+.|++++.+.+
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            4588999999999999999999999999999999999999999999999999998887643

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.77  E-value=0.41  Score=42.36  Aligned_cols=135  Identities=13%  Similarity=0.028  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHhhccCc--CHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCChhhHHHHHHHHHHH
Q 015427          116 LEWAVLVSPFFFWGTAMVAMKEVLPKA--GTFFVAAFRLIPAGLLLITFASSQGRKL------PSGFNAWVSIFLFALVD  187 (407)
Q Consensus       116 ~~~l~~~~~~~~~~~~~~~~k~~~~~~--~p~~~~~~r~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~  187 (407)
                      .|-++++++..+=|.........-.+.  +.....+.-.+-..+.+..-+++.+.-+      .+.+..++.+.+.++.+
T Consensus       172 ~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s  251 (337)
T KOG1580|consen  172 FGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIAS  251 (337)
T ss_pred             hHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            455666666666666666653322211  1222233333333333332222222211      11235666677777654


Q ss_pred             HHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          188 ASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       188 ~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                       .+++.+.+.-..+-++-.-+++..+--+|+++.+.++++.+++.+||+|.++.+.|...=...
T Consensus       252 -~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~  314 (337)
T KOG1580|consen  252 -CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD  314 (337)
T ss_pred             -HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence             457778888888888888888899999999999999999999999999999999998765443

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=93.39  E-value=0.58  Score=35.80  Aligned_cols=110  Identities=15%  Similarity=0.096  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHhHHHHHHhhccCcC----H--HHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHH
Q 015427          120 VLVSPFFFWGTAMVAMKEVLPKAG----T--FFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQG  193 (407)
Q Consensus       120 ~~~~~~~~~~~~~~~~k~~~~~~~----p--~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  193 (407)
                      -++...++||..+.+.|......+    +  ....++|-.....                  -.+.+++.=.++.. +..
T Consensus         7 ~lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~------------------l~w~Y~iPFllNqc-gSa   67 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLF------------------LNWEYLIPFLLNQC-GSA   67 (125)
T ss_pred             HHHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHH------------------HhHHHHHHHHHHHh-hHH
Confidence            356778999999999987665432    2  2222222222111                  11222233333444 345


Q ss_pred             HHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHh
Q 015427          194 FLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (407)
Q Consensus       194 ~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  248 (407)
                      +||.-+++.+.+.+..+ ++++-.|+.+.+..+-.|.......+|..+.++|+.+.
T Consensus        68 ly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC  123 (125)
T ss_pred             HHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence            88999999999999977 67788999999965555666777889999999998764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.23  E-value=0.78  Score=40.35  Aligned_cols=132  Identities=12%  Similarity=0.159  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhcc--CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC------CChhhHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKLP------SGFNAWVSIFLFALVDA  188 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~  188 (407)
                      |++++...++.-+......|...+  +..-++..+...+++..+++.+-+..+..-+      .+.....++++.|....
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv  235 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV  235 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence            556665555555555555555444  4557788999999999888877666544322      23344556777777776


Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhh
Q 015427          189 SCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLE  249 (407)
Q Consensus       189 ~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~  249 (407)
                      ++++ |.-+.++-++....+++-++.-.-.++.+.++++|+.+...+.++++++...++-.
T Consensus       236 giSy-~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa  295 (309)
T COG5070         236 GISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA  295 (309)
T ss_pred             hhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence            6665 77889999999999999999999999999999999999999988888776555443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.11  E-value=1.8  Score=40.86  Aligned_cols=142  Identities=12%  Similarity=-0.018  Sum_probs=92.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHH
Q 015427          261 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFG  340 (407)
Q Consensus       261 ~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~  340 (407)
                      ...|+++-.+++++.+.+++-.||.+ +-+-...=..+.+++.++.-.......-|....-....+...+......|++ 
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk-~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l-   82 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVK-GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL-   82 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcC-CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH-
Confidence            45799999999999999999999974 4444444444555555555444444444444333344555566666666655 


Q ss_pred             HHHHHHHHHHHhccCChhhH-hhhhhhhHHHHHHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHhccc
Q 015427          341 SAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLG-------ETFSPLQLVGAAVTVVAIYLVNFR  404 (407)
Q Consensus       341 ~~~~~~l~~~al~~~~~~~~-s~~~~~~pv~a~i~~~~~~~-------e~~~~~~~iG~~lil~g~~l~~~~  404 (407)
                      =+++-..|-.++|+++.+.. ++..-+..++..++--++.|       ++-....++|.++.++|+.+..+.
T Consensus        83 WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   83 WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            34455677888999887643 33444666666666555533       233456799999999999987653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=92.87  E-value=0.047  Score=50.52  Aligned_cols=118  Identities=12%  Similarity=0.081  Sum_probs=87.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 015427          260 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF  339 (407)
Q Consensus       260 ~~~~G~l~~l~sa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~  339 (407)
                      ++.+|.++++.+.+..+...++.|+..++......-                ..+++ .    .-.....|+    .|++
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r----------------a~~gg-~----~yl~~~~Ww----~G~l   72 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR----------------AGEGG-Y----GYLKEPLWW----AGML   72 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc----------------ccCCC-c----chhhhHHHH----HHHH
Confidence            345899999999999999999988876553320000                00111 0    001111222    4556


Q ss_pred             HHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc
Q 015427          340 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN  402 (407)
Q Consensus       340 ~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~  402 (407)
                      ..+++-.+.+.|....|++.++++..++.+...+++..+++|+++....+|+++.++|..++.
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV  135 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV  135 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence            677778888888899999999999999999999999999999999999999999999887654

>PRK02237 hypothetical protein; Provisional

Probab=92.56  E-value=2  Score=33.20  Aligned_cols=53  Identities=11%  Similarity=-0.019  Sum_probs=40.7

Q ss_pred             hhc-cchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          199 LQR-TSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       199 l~~-~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      ++- .+.+.+..- -....+.+.+..+++-|+|+++.+++|..+|++|+.++...
T Consensus        52 l~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         52 LQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             cCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            443 334555433 44566777788999999999999999999999999988653

>PRK02237 hypothetical protein; Provisional

Probab=91.11  E-value=2  Score=33.20  Aligned_cols=48  Identities=10%  Similarity=0.113  Sum_probs=41.8

Q ss_pred             hHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          359 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       359 ~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      ..+...-.-.+.++++++.+-|++|+...++|+++.++|+.++.+..|
T Consensus        61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            445667788899999999999999999999999999999988876554

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=90.87  E-value=2.8  Score=32.35  Aligned_cols=54  Identities=13%  Similarity=0.005  Sum_probs=43.1

Q ss_pred             HhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcC
Q 015427          198 GLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAP  251 (407)
Q Consensus       198 al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~  251 (407)
                      .++-.+.+.+... -....+.+.+..+.+-|+++++.+++|..+|++|+.++...
T Consensus        50 Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   50 TLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             hcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            3555555555544 45667888889999999999999999999999999998764

; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=90.53  E-value=0.57  Score=42.64  Aligned_cols=65  Identities=14%  Similarity=0.234  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHhccCChhhHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcc
Q 015427          339 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF  403 (407)
Q Consensus       339 ~~~~~~~~l~~~al~~~~~~~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~  403 (407)
                      +|-..+..+.+.++...+++...++...-.+++-+++.-+++..++..+|+|+..+++|.+.+-.
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            55666777888999999999999999999999999999999999999999999999999987643

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.07  E-value=6.3  Score=36.59  Aligned_cols=133  Identities=14%  Similarity=-0.001  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhccCcC-----HHHHHHHHHHHHHHHHHHHHHHhCCCCCC---------Ch----hh
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG-----TFFVAAFRLIPAGLLLITFASSQGRKLPS---------GF----NA  176 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~~~~-----p~~~~~~r~~~~~l~~~~~~~~~~~~~~~---------~~----~~  176 (407)
                      ..|..+..++.++-|.-+.+.+.+.++-|     |....+--.-...+.++|..+..+...+.         ..    +.
T Consensus       163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv  242 (349)
T KOG1443|consen  163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV  242 (349)
T ss_pred             ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence            56788888888888988888877766432     54444333333334444443333322211         11    11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHh
Q 015427          177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (407)
Q Consensus       177 ~~~~~~~g~~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  248 (407)
                      ...+.+.|.+..... .+-+.=+..++.-..++.--.-=+.+.+++..+++++++...|+|..++..|+.+=
T Consensus       243 ~g~i~l~g~laF~l~-~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  243 IGLISLGGLLAFLLE-FSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHH-HHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            222223333322222 23344455555555555555556788899999999999999999999999999886

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=90.02  E-value=0.42  Score=43.33  Aligned_cols=136  Identities=18%  Similarity=0.144  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHhhccCcC--HHHHHHHHHHHHHHHHHHHHHHhCCCC-------CCChhhHHHHHHH
Q 015427          113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAG--TFFVAAFRLIPAGLLLITFASSQGRKL-------PSGFNAWVSIFLF  183 (407)
Q Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~--p~~~~~~r~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~  183 (407)
                      -...|.++.+.+.+.-+.+.+.+|..+..++  -+.++++..+.+.++++|.+...+.-.       .+..+-|..+.+.
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence            3577899999999999999999997766544  789999999999999999987765421       1233555566666


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHHhhc-HHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhc
Q 015427          184 ALVDASCFQGFLAQGLQRTSAGLGSVIIDS-QPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEA  250 (407)
Q Consensus       184 g~~~~~~~~~~~~~al~~~~~s~a~~i~~~-~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~  250 (407)
                      |++++..++.. .+=++.+++ .++-|..+ -...-.+++..+++|.-+...|-+-++.++|-.+-++
T Consensus       262 glfgF~mgyvT-g~QIK~TSp-lThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  262 GLFGFAMGYVT-GWQIKVTSP-LTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHHhhhee-eEEEEeccc-ceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            66665554422 222333332 22233222 2344456777899999998888888888887665543

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=89.46  E-value=2.7  Score=32.47  Aligned_cols=48  Identities=17%  Similarity=0.252  Sum_probs=42.4

Q ss_pred             hHhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccCC
Q 015427          359 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS  406 (407)
Q Consensus       359 ~~s~~~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~~  406 (407)
                      ..+...-.-.+.++++++.+-|++|+...++|+++.++|+.++.+..|
T Consensus        59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            345666788999999999999999999999999999999999887665

; GO: 0016020 membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=89.20  E-value=1.8  Score=39.43  Aligned_cols=60  Identities=7%  Similarity=0.067  Sum_probs=41.8

Q ss_pred             chhhHHHHHHHHHHHHHHHhHHHHHHhhccCc--------CHHH----HHHHHHHHHHHHHHHHHHHhCCCC
Q 015427          111 ELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKA--------GTFF----VAAFRLIPAGLLLITFASSQGRKL  170 (407)
Q Consensus       111 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~--------~p~~----~~~~r~~~~~l~~~~~~~~~~~~~  170 (407)
                      ..++..|+++.+++.+++|.+.+-.+++.++-        .+..    ...--++.+.+.++.++..+|.+.
T Consensus       178 ~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt~~F~~Y~~~~rn~P  249 (254)
T PF07857_consen  178 RKKRIVGIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTSTVYFVIYCIIKRNKP  249 (254)
T ss_pred             ccchhHhHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHHHHHHHHHHhhcCCC
Confidence            34578899999999999999999998876653        2332    233344556666777777766554

The region concerned is approximately 280 residues long.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=89.07  E-value=3.4  Score=37.63  Aligned_cols=137  Identities=13%  Similarity=0.080  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHhhcc--CcCHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CCChhhHHHHHHHHH
Q 015427          115 LLEWAVLVSPFFFWGTAMVAMKEVLP--KAGTFFVAAFRLIPAGLLLITFASSQGRKL-------PSGFNAWVSIFLFAL  185 (407)
Q Consensus       115 ~~~~l~~~~~~~~~~~~~~~~k~~~~--~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~  185 (407)
                      ..|+...-.+.+.=+....+.....+  .-+..+.++..+.++..+++..+...+.-.       .-+.+.....++.+.
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            44555444444444444555433333  233677888888888888777766655432       123455666666665


Q ss_pred             HHHHHHHHHHHHHhhccchhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          186 VDASCFQGFLAQGLQRTSAGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       186 ~~~~~~~~~~~~al~~~~~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      .+.. +..+...=++.-.+..+..+...--..+.+++++++-++++....-+.++++.|+.+=..+.
T Consensus       269 ~gyl-G~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  269 AGYL-GIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HhHh-hHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            5433 44333333444566667777777888999999999999999999999999999999988765

>TIGR02865 spore_II_E stage II sporulation protein E

Probab=84.18  E-value=65  Score=34.68  Aligned_cols=45  Identities=20%  Similarity=0.261  Sum_probs=33.5

Q ss_pred             hhhHHHHhhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHh
Q 015427          204 AGLGSVIIDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLL  248 (407)
Q Consensus       204 ~s~a~~i~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~  248 (407)
                      ++.+.++..+.|+-.+.++.+.+.+|.+...+.+.+-.++|.+-+
T Consensus        10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~   54 (764)
T TIGR02865        10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI   54 (764)
T ss_pred             HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence            367788899999999999988877775445566666666776654

Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	407
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.91
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.83
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.83
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.73

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.91  E-value=3e-09  Score=86.11  Aligned_cols=70  Identities=9%  Similarity=0.173  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHhhh-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          336 TSIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       336 ~g~~~~~~~~~l~~~al~~~~~~~~s~~-~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      +++++++++|.++.+++++.+++++.++ ..+.|++++++++++|||++++.+++|+++|++|++++++.+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5677889999999999999999999999 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.83  E-value=7.7e-08  Score=75.12  Aligned_cols=102  Identities=17%  Similarity=0.116  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHhHHHHHHhhccCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 015427          117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA  196 (407)
Q Consensus       117 ~~l~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  196 (407)
                      .+++++++.++........|... +..                               + .+ ..+.+++...+++.++.
T Consensus         3 ~~l~l~~a~~~e~~~~~~lK~s~-~~~-------------------------------~-~~-~~~~~~~~~~~~~~~~~   48 (110)
T 3b5d_A            3 PYIYLGGAILAEVIGTTLMKFSE-GFT-------------------------------R-LW-PSVGTIICYCASFWLLA   48 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc-Ccc-------------------------------h-HH-HHHHHHHHHHHHHHHHH
Confidence            46777788888888888888742 110                               1 11 22455556677888999


Q ss_pred             HHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          197 QGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       197 ~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      +++++.|.+.+..+ ..+.|+++.+++++++||+++..+++|+.+++.|++++...+
T Consensus        49 ~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999998 899999999999999999999999999999999999997653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.83  E-value=9.8e-08  Score=74.52  Aligned_cols=70  Identities=9%  Similarity=0.173  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHHHhccCChhhHhhh-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcccC
Q 015427          336 TSIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG  405 (407)
Q Consensus       336 ~g~~~~~~~~~l~~~al~~~~~~~~s~~-~~~~pv~a~i~~~~~~~e~~~~~~~iG~~lil~g~~l~~~~~  405 (407)
                      .++++.++++.++.+++|+.+.+++.++ ..+.|+++.+.++++|||+++..+++|.++|++|+++++..+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5567788899999999999999999998 899999999999999999999999999999999999998754

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.73  E-value=2.7e-08  Score=80.50  Aligned_cols=71  Identities=20%  Similarity=0.253  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHH-hhcHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHhhcCC
Q 015427          182 LFALVDASCFQGFLAQGLQRTSAGLGSVI-IDSQPLSVAVLAALLFGESIGLVGAGGLVLGVIGLLLLEAPA  252 (407)
Q Consensus       182 ~~g~~~~~~~~~~~~~al~~~~~s~a~~i-~~~~p~~~~lla~l~l~e~~~~~~~~~~~l~~~Gv~l~~~~~  252 (407)
                      +.+++...+++.++.+++++.+++.+..+ .++.|+++++++++++||+++..+++|+.++++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45566677788899999999999999999 899999999999999999999999999999999999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00