Citrus Sinensis ID: 015456

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
Protein Sequence
MAMSQMASTLASPLSFLLLRHSLSPYIPRQHSVSSPLSKHQHSHQILCAKKSSSSNNSKQQKPKAQTASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHcccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHccccccccccHHHHcccccccEEEEcccHHHHHccccccccccHHHHHHHHccccEEEEEEEcccccccccccccccccEEEEEEcccccEEEEEcccccEEEEEEccccccHHHHHHHHHHHHccccccccHHHHHHHHccccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHcccccccccccccccccccccccEEEEccccccccccEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHccccccEEcccccccccccHHHcccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHcHHcccccHHHHccHHHHcccccEEEEEccHHHHHHcccccccccHHHHHHHHHcccEEEEEEEcccccccccccEEEEcccEEEEccccccEEEEEccccEEEEEEcccccccHHHHHHHHHHHHccccccccHHHHHHccccccccccccccHHHcHHHcc
Coil and Loop (DISEMBL)
MAMSQMASTLASPLSFLLLRhslspyiprqhsvssplskhqhshqilcakkssssnnskqqkpkaqtassslgpkagvaiykpksYEVLAADAANSLAFALQdgktrleidfpplpsnissykgssdefIDANIQLALAVVRKLQERMETracivfpdkpekgRASRLFKRALDsidgitigslddvptgAVRSFFSSIRntldfdfddqeegrwqsdepptlyVFINCSTRELSVIEKYVVLFEEAysplcgkflktekfamstpALLFNLELDTLRADlgilgfpskdlHYRFLSQFTPVFYIRIReysktvpvapftinysgalfrqypgpwqvmLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS
Flexible Loop (DISEMBL)
MAMSQMASTLASPLSFLLLRHSLSPYIPRQHSVSSPLSKHQHSHQILCAkkssssnnskqqkpkaqtassslgpkaGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETracivfpdkpekgraSRLFKRaldsidgitigslddvptGAVRSFFSSIRNTLDFDFDDQEegrwqsdepptLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESetrftlsetKEELLRVLglqeeegsslqFLRRGYknatwweedvdlelssawrs
Low Complexity Region (SEG)
MAMSQMASTLASPLSFLLLRHSLSPYIPRQHSVSSPLSKHQHSHQILCAkkssssnnskqqkpkAQTASSSLGPKAGVAIYKPKSYEVlaadaanslafalQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS
Disordered region (IsUnstruct)
**************SFLLLRHS*******************************************************VAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPP************DEFIDANIQLALAVVRKLQERMETRACIVFPD******ASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDD*****W****PPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDL********
Disordered Region (DISOPRED)
********************************************************************************YKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLD*************DEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELL******************GYKNATWWEEDVDLE*******
Disordered Region (DISEMBL)
**********ASPLSFLLLRHSLSPYIP********************************************GPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDL********
Disordered Region (DISPRO)
*************LSFLLLRHSLSPYIP**HSVSSPLSKHQHSHQILCAK***************************VAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEED***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMSQMASTLASPLSFLLLRHSLSPYIPRQHSVSSPLSKHQHSHQILCAKKSSSSNNSKQQKPKAQTASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
255543323	385	conserved hypothetical protein [Ricinus	0.923	0.974	0.723	1e-164
224115852	381	predicted protein [Populus trichocarpa]	0.862	0.918	0.757	1e-162
225443166	378	PREDICTED: uncharacterized protein LOC10	0.778	0.835	0.798	1e-155
298204679	374	unnamed protein product [Vitis vinifera]	0.778	0.844	0.798	1e-155
363807938	381	uncharacterized protein LOC100803725 [Gl	0.935	0.997	0.692	1e-154
357467949	375	hypothetical protein MTR_4g007190 [Medic	0.778	0.842	0.777	1e-153
449528829	388	PREDICTED: uncharacterized LOC101213889	0.812	0.850	0.757	1e-151
449436191	388	PREDICTED: uncharacterized protein LOC10	0.807	0.845	0.759	1e-150
18410256	358	low PSII accumulation 3 protein [Arabido	0.795	0.902	0.755	1e-142
21537091	358	unknown [Arabidopsis thaliana]	0.795	0.902	0.752	1e-142

>gi|255543323|ref|XP_002512724.1| conserved hypothetical protein [Ricinus communis] gi|223547735|gb|EEF49227.1| conserved hypothetical protein [Ricinus communis]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/409 (72%), Positives = 329/409 (80%), Gaps = 34/409 (8%)

Query: 1   MAMSQMASTLASPLSFLLLRHSLSPYIPRQ--HSVSSPLSKHQH-SHQILCAKKSSSSNN 57
           MA S + S   +PL F        P+ PR    SVS  L K  + + +I C      SN 
Sbjct: 8   MASSALPSISRTPLFF--------PHSPRTLLFSVSPSLQKLPYPTIRIQC------SNT 53

Query: 58  SKQQKPKAQTASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPS 117
           SKQQ+     ++S+L P+ GV++YKPKSY+VLA DAAN LA+ALQDGKTRLEIDFPPLPS
Sbjct: 54  SKQQEESQSQSTSNLNPRKGVSVYKPKSYDVLANDAANCLAYALQDGKTRLEIDFPPLPS 113

Query: 118 NISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSID 177
           NISSYKGSSDEFIDANIQLALA++RKLQE+ ETRACIVFPDKPEK RAS LFK ALDSID
Sbjct: 114 NISSYKGSSDEFIDANIQLALAIIRKLQEKKETRACIVFPDKPEKRRASELFKAALDSID 173

Query: 178 GITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVI 237
           GITIGSLDDVP+G V +FF S+RNTLDFDF+D  EGRWQSDEPP+LYVFINCSTRELSVI
Sbjct: 174 GITIGSLDDVPSGPVSNFFKSVRNTLDFDFEDDNEGRWQSDEPPSLYVFINCSTRELSVI 233

Query: 238 EKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLS 297
           EKYV                 E FA STPALLFNLELDTLRADLG+LGFP+KDLHYRFLS
Sbjct: 234 EKYV-----------------ENFAGSTPALLFNLELDTLRADLGLLGFPTKDLHYRFLS 276

Query: 298 QFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFT 357
           QF PVFYIRIREYSKTV VAP+ +NYSGALFRQYPGPWQVMLKQ+D SYACVAES TRFT
Sbjct: 277 QFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDGSYACVAESATRFT 336

Query: 358 LSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           L ETKEELLRVLGLQEEEGSSL+FLRRGYK+ATWWEE+V+LE SS WR+
Sbjct: 337 LGETKEELLRVLGLQEEEGSSLEFLRRGYKSATWWEEEVELEASSEWRN 385

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115852|ref|XP_002332073.1| predicted protein [Populus trichocarpa] gi|222831959|gb|EEE70436.1| predicted protein [Populus trichocarpa]

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 285/376 (75%), Positives = 314/376 (83%), Gaps = 26/376 (6%)

Query: 31  HSVSSPLSKHQHSHQILCAKKSSSSNNSKQQKPKAQTASSSLGPKAGVAIYKPKSYEVLA 90
            S S  LSK  ++ +I CA      N +KQQK  +QT  S   PK+GVA+YKPKSYEVL 
Sbjct: 32  RSPSPTLSKLSYTTKIQCA------NTNKQQK--SQTTQSH-DPKSGVAVYKPKSYEVLV 82

Query: 91  ADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMET 150
            DAANSLAF+LQDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAV+RKLQE+ ET
Sbjct: 83  TDAANSLAFSLQDGKIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVIRKLQEKRET 142

Query: 151 RACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQ 210
           RAC+VFPDKPE  RA R+FK ALDSIDGITIGSLDD+P+G V +FF S+RNTLDFDF+D 
Sbjct: 143 RACVVFPDKPEMLRACRIFKTALDSIDGITIGSLDDIPSGPVTTFFKSVRNTLDFDFEDD 202

Query: 211 EEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLF 270
            EGRWQS+EPP+LYVFINCSTRELSVIEKYV                 EKFA STP LLF
Sbjct: 203 SEGRWQSNEPPSLYVFINCSTRELSVIEKYV-----------------EKFATSTPTLLF 245

Query: 271 NLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQ 330
           NLELDTLRADLG+LGFP+KDLHYRFLSQF PVFYIRIREYSKT+ VAP+ +NYSGALFRQ
Sbjct: 246 NLELDTLRADLGLLGFPTKDLHYRFLSQFIPVFYIRIREYSKTIGVAPYIVNYSGALFRQ 305

Query: 331 YPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNAT 390
           YPGPWQVMLKQAD SYACVAES TRFTL ETKEELLRVLGLQEE+G+SL+FLRRGYK+AT
Sbjct: 306 YPGPWQVMLKQADGSYACVAESATRFTLGETKEELLRVLGLQEEQGTSLEFLRRGYKSAT 365

Query: 391 WWEEDVDLELSSAWRS 406
           WWEEDV+LE SS WRS
Sbjct: 366 WWEEDVELETSSDWRS 381

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443166|ref|XP_002264352.1| PREDICTED: uncharacterized protein LOC100263772 [Vitis vinifera]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/333 (79%), Positives = 291/333 (87%), Gaps = 17/333 (5%)

Query: 74  PKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDAN 133
           PK GV++YKPKSYEVL  DAANSLA+AL DGKTRLEIDFPPLPSN+SSYKGSSDEFIDAN
Sbjct: 63  PKVGVSVYKPKSYEVLVTDAANSLAYALDDGKTRLEIDFPPLPSNMSSYKGSSDEFIDAN 122

Query: 134 IQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVR 193
           IQL LAVVRKLQER ET+ACIVFPDKPEK RAS++FK ALDSIDGI+IGSLDDVP+G V 
Sbjct: 123 IQLVLAVVRKLQERKETKACIVFPDKPEKRRASQIFKTALDSIDGISIGSLDDVPSGPVA 182

Query: 194 SFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCG 253
           +FF SIR+TLDFDF+D  EGRW+S E P+LY+FINCSTREL+ IEK+V            
Sbjct: 183 TFFRSIRDTLDFDFEDDNEGRWESKEAPSLYIFINCSTRELAAIEKFV------------ 230

Query: 254 KFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKT 313
                EKFA STP LLFNLELDTLRADLG+LGFP+KDLHYRFLSQF PVFYIRIREYSKT
Sbjct: 231 -----EKFAPSTPTLLFNLELDTLRADLGLLGFPTKDLHYRFLSQFVPVFYIRIREYSKT 285

Query: 314 VPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQE 373
           V VAP+ +NYSGALFRQYPGPWQVMLKQAD SYACVAES TRFTL ETKEELLRVLGLQE
Sbjct: 286 VAVAPYIVNYSGALFRQYPGPWQVMLKQADGSYACVAESATRFTLGETKEELLRVLGLQE 345

Query: 374 EEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           EEGSSL+FLRRGYK++TWWEEDV+LE SSAWRS
Sbjct: 346 EEGSSLEFLRRGYKSSTWWEEDVELESSSAWRS 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204679|emb|CBI25177.3| unnamed protein product [Vitis vinifera]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/333 (79%), Positives = 291/333 (87%), Gaps = 17/333 (5%)

Query: 74  PKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDAN 133
           PK GV++YKPKSYEVL  DAANSLA+AL DGKTRLEIDFPPLPSN+SSYKGSSDEFIDAN
Sbjct: 59  PKVGVSVYKPKSYEVLVTDAANSLAYALDDGKTRLEIDFPPLPSNMSSYKGSSDEFIDAN 118

Query: 134 IQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVR 193
           IQL LAVVRKLQER ET+ACIVFPDKPEK RAS++FK ALDSIDGI+IGSLDDVP+G V 
Sbjct: 119 IQLVLAVVRKLQERKETKACIVFPDKPEKRRASQIFKTALDSIDGISIGSLDDVPSGPVA 178

Query: 194 SFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCG 253
           +FF SIR+TLDFDF+D  EGRW+S E P+LY+FINCSTREL+ IEK+V            
Sbjct: 179 TFFRSIRDTLDFDFEDDNEGRWESKEAPSLYIFINCSTRELAAIEKFV------------ 226

Query: 254 KFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKT 313
                EKFA STP LLFNLELDTLRADLG+LGFP+KDLHYRFLSQF PVFYIRIREYSKT
Sbjct: 227 -----EKFAPSTPTLLFNLELDTLRADLGLLGFPTKDLHYRFLSQFVPVFYIRIREYSKT 281

Query: 314 VPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQE 373
           V VAP+ +NYSGALFRQYPGPWQVMLKQAD SYACVAES TRFTL ETKEELLRVLGLQE
Sbjct: 282 VAVAPYIVNYSGALFRQYPGPWQVMLKQADGSYACVAESATRFTLGETKEELLRVLGLQE 341

Query: 374 EEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           EEGSSL+FLRRGYK++TWWEEDV+LE SSAWRS
Sbjct: 342 EEGSSLEFLRRGYKSSTWWEEDVELESSSAWRS 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807938|ref|NP_001242453.1| uncharacterized protein LOC100803725 [Glycine max] gi|255642243|gb|ACU21386.1| unknown [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/407 (69%), Positives = 316/407 (77%), Gaps = 27/407 (6%)

Query: 1   MAMSQMASTLASPLSFLLLRH-SLSPYIPRQHSVSSPLSKHQHSHQILCAKKSSSSNNSK 59
           M M+   S+ +  L+FLL R  SL P      S S      ++     CAK  S      
Sbjct: 1   MVMAMAISSPSYNLTFLLPRSGSLQPLSLTPPSCSFFAQPLRNLPLKFCAKIQSVGVG-- 58

Query: 60  QQKPKAQTASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNI 119
           ++ P +        PKAGV++YKPKSYEVL +DAANSL++ALQDGK RLEIDFPPLPSNI
Sbjct: 59  REGPASD-------PKAGVSLYKPKSYEVLVSDAANSLSYALQDGKLRLEIDFPPLPSNI 111

Query: 120 SSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGI 179
           SSYKGSSDEFIDANIQLALAVVRKL+E+ ETRACIVFPDKPEK RA +LFK ALDSIDGI
Sbjct: 112 SSYKGSSDEFIDANIQLALAVVRKLKEKKETRACIVFPDKPEKRRACQLFKAALDSIDGI 171

Query: 180 TIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEK 239
           TIGSLDDVPTG + SFF S+RNTLDFDF+D  EGRWQS EPP+LY+FINCSTREL+ IEK
Sbjct: 172 TIGSLDDVPTGPMTSFFRSVRNTLDFDFEDDNEGRWQSSEPPSLYIFINCSTRELAYIEK 231

Query: 240 YVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQF 299
           YV                 EKFA STP LLFNLELDTLRADLG+ GF +KDLHYRFLSQF
Sbjct: 232 YV-----------------EKFATSTPTLLFNLELDTLRADLGLPGFSAKDLHYRFLSQF 274

Query: 300 TPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLS 359
           TPVFYIRIREYSKTV +AP+ +NYSGA+FRQYPGPWQVMLKQAD SYAC+AES  RF+L 
Sbjct: 275 TPVFYIRIREYSKTVAIAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACIAESANRFSLG 334

Query: 360 ETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           E KEELLRVLGLQEEEGSSL+FLRRGYK +TWWEED D E+SSAWRS
Sbjct: 335 EAKEELLRVLGLQEEEGSSLEFLRRGYKASTWWEEDFDSEVSSAWRS 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467949|ref|XP_003604259.1| hypothetical protein MTR_4g007190 [Medicago truncatula] gi|355505314|gb|AES86456.1| hypothetical protein MTR_4g007190 [Medicago truncatula]

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/333 (77%), Positives = 289/333 (86%), Gaps = 17/333 (5%)

Query: 74  PKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSSDEFIDAN 133
           PK+GV++YKPKSYEVLA DAANSL FALQDGK R+EIDFPPLPSNISSYKGSSD+FIDAN
Sbjct: 60  PKSGVSVYKPKSYEVLATDAANSLNFALQDGKLRIEIDFPPLPSNISSYKGSSDDFIDAN 119

Query: 134 IQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVR 193
           IQL LAVV+KLQE+ ETRAC+VFPDKPEK RAS+LFK ALDS+DG+TIGSLDD+P G V 
Sbjct: 120 IQLVLAVVKKLQEKKETRACVVFPDKPEKLRASQLFKAALDSVDGLTIGSLDDIPAGPVA 179

Query: 194 SFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCG 253
           SFF S+RNTLDFDF+D+ EGRWQS EPP+LY+FINCSTREL  IEKYV            
Sbjct: 180 SFFRSVRNTLDFDFEDENEGRWQSSEPPSLYIFINCSTRELGYIEKYV------------ 227

Query: 254 KFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKT 313
                EKFA STP LLFNLELDTLRADLG+LGFP KDL YRFLSQFTPVFYIRIR+YSKT
Sbjct: 228 -----EKFAPSTPTLLFNLELDTLRADLGLLGFPPKDLQYRFLSQFTPVFYIRIRDYSKT 282

Query: 314 VPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQE 373
           + VAP+ +NYSGA+FRQYPGPWQVMLKQAD SYACVAES TRFTL E KEELLRVLGLQE
Sbjct: 283 IAVAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACVAESATRFTLGEAKEELLRVLGLQE 342

Query: 374 EEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           E GSSL+FLRRGY+++TWWEED +LE+SSAWR+
Sbjct: 343 EVGSSLEFLRRGYRSSTWWEEDSELEVSSAWRT 375

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528829|ref|XP_004171405.1| PREDICTED: uncharacterized LOC101213889 [Cucumis sativus]

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 263/347 (75%), Positives = 291/347 (83%), Gaps = 17/347 (4%)

Query: 60  QQKPKAQTASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNI 119
           + K +A   +    PKAGV IYKPK+YEVL +DAANSLA+AL+DGK RLEIDFPPLPSNI
Sbjct: 59  RDKERAAPVTQRSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNI 118

Query: 120 SSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGI 179
           SSYKGSSD+FIDANIQLALAV R LQE+   R+CIVFPDKPEK RAS+LFK ALDSIDGI
Sbjct: 119 SSYKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGI 178

Query: 180 TIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEK 239
           T+ SLDDVP GAV SFF S+RNTLDFDF+D   GRW S +PP+LY+FINCSTREL +IEK
Sbjct: 179 TVSSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEK 238

Query: 240 YVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQF 299
           YV                 E FA S PALLFNLEL+TLRADLG+LGFP KDLHYRFLSQF
Sbjct: 239 YV-----------------ETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQF 281

Query: 300 TPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLS 359
            PVFYIRIREYSKTV VAP+ +NYSGALFRQYPGPWQVMLKQ+D+SYACVAESETRFTL 
Sbjct: 282 IPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLG 341

Query: 360 ETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           ETK+ELLRVLGLQEE+GSSL+FLRRGYK ATWWEEDVD E+SSAWRS
Sbjct: 342 ETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436191|ref|XP_004135877.1| PREDICTED: uncharacterized protein LOC101213889 [Cucumis sativus]

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/345 (75%), Positives = 289/345 (83%), Gaps = 17/345 (4%)

Query: 62  KPKAQTASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISS 121
           K +A   +    PKAGV IYKPK+YEVL +DAANSLA+AL+DGK RLEIDFPPLPSNISS
Sbjct: 61  KERAAPVTQRSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISS 120

Query: 122 YKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITI 181
           YKGSSD+FIDANIQLALAV R LQE+   R+CIVFPDKPEK RAS+LFK ALDSIDGIT+
Sbjct: 121 YKGSSDDFIDANIQLALAVARNLQEKRGIRSCIVFPDKPEKRRASQLFKTALDSIDGITV 180

Query: 182 GSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYV 241
            SLDDVP GAV SFF S+RNTLDFDF+D   GRW S +PP+LY+FINCSTREL +IEKYV
Sbjct: 181 SSLDDVPAGAVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYV 240

Query: 242 VLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTP 301
                            E FA S PALLFNLEL+TLRADLG+LGFP KDLHYRFLSQF P
Sbjct: 241 -----------------ETFASSIPALLFNLELETLRADLGLLGFPPKDLHYRFLSQFIP 283

Query: 302 VFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSET 361
           VFYIRIREYSKTV VAP+ +NYSGALFRQY GPWQVMLKQ+D+SYACVAESETRFTL ET
Sbjct: 284 VFYIRIREYSKTVAVAPYIVNYSGALFRQYAGPWQVMLKQSDNSYACVAESETRFTLGET 343

Query: 362 KEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           K+ELLRVLGLQEE+GSSL+FLRRGYK ATWWEEDVD E+SSAWRS
Sbjct: 344 KDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410256|ref|NP_565054.1| low PSII accumulation 3 protein [Arabidopsis thaliana] gi|25082946|gb|AAN72020.1| Unknown protein [Arabidopsis thaliana] gi|31711852|gb|AAP68282.1| At1g73060 [Arabidopsis thaliana] gi|332197288|gb|AEE35409.1| low PSII accumulation 3 protein [Arabidopsis thaliana]

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/340 (75%), Positives = 289/340 (85%), Gaps = 17/340 (5%)

Query: 67  TASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSS 126
           + SS+  P+ GV +YKPKSYEVLA DAANSLAFALQD K+RLEIDFPPLPS+ISSYKGSS
Sbjct: 36  STSSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSS 95

Query: 127 DEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDD 186
           D+FIDANIQLA+ VVRKLQE++ETRACIVFPDKPEK RAS+ FK A DS+DGI+IGSLDD
Sbjct: 96  DDFIDANIQLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDD 155

Query: 187 VPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEE 246
           +P  +V +FF SIR+TLDFDF+D+ EG W+  EPPTLY+FINCSTRELS IEK+V     
Sbjct: 156 IPGTSVTNFFRSIRSTLDFDFEDENEGTWEPKEPPTLYIFINCSTRELSFIEKFV----- 210

Query: 247 AYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIR 306
                       E FA STPALLFNLELDTLRADLG+LGFP KDLHYRFLSQF PVFYIR
Sbjct: 211 ------------ETFASSTPALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIR 258

Query: 307 IREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELL 366
            REYSKTV VAPF +NY+GALFRQYPGPWQVMLKQ D S+ACVAES TRFTL ETKEELL
Sbjct: 259 TREYSKTVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELL 318

Query: 367 RVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           +VLGLQEE+GSSL+FLRRGYK+ATWWEEDV+LE SS WR+
Sbjct: 319 QVLGLQEEKGSSLEFLRRGYKSATWWEEDVELEASSNWRN 358

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21537091|gb|AAM61432.1| unknown [Arabidopsis thaliana]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 256/340 (75%), Positives = 289/340 (85%), Gaps = 17/340 (5%)

Query: 67  TASSSLGPKAGVAIYKPKSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSNISSYKGSS 126
           + SS+  P+ GV +YKPKSYEVLA DAANSLAFALQD K+RLEIDFPPLPS+ISSYKGSS
Sbjct: 36  STSSNSDPRRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSS 95

Query: 127 DEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDD 186
           D+FIDANIQLA+ VVRKLQE++ETRACIVFPDKPEK RAS+ FK A DS+DGI+IGSLDD
Sbjct: 96  DDFIDANIQLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDD 155

Query: 187 VPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEE 246
           +P  +V +FF SIR+TLDFDF+++ EG W+  EPPTLY+FINCSTRELS IEK+V     
Sbjct: 156 IPGTSVTNFFRSIRSTLDFDFENENEGTWEPKEPPTLYIFINCSTRELSFIEKFV----- 210

Query: 247 AYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIR 306
                       E FA STPALLFNLELDTLRADLG+LGFP KDLHYRFLSQF PVFYIR
Sbjct: 211 ------------ETFASSTPALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIR 258

Query: 307 IREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELL 366
            REYSKTV VAPF +NY+GALFRQYPGPWQVMLKQ D S+ACVAES TRFTL ETKEELL
Sbjct: 259 TREYSKTVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELL 318

Query: 367 RVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
           +VLGLQEE+GSSL+FLRRGYK+ATWWEEDV+LE SS WR+
Sbjct: 319 QVLGLQEEKGSSLEFLRRGYKSATWWEEDVELEASSNWRN 358

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
TAIR|locus:2032662	358	LPA3 "AT1G73060" [Arabidopsis	0.371	0.421	0.830	2.3e-131

TAIR|locus:2032662 LPA3 "AT1G73060" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
 Identities = 127/153 (83%), Positives = 139/153 (90%)

Query:   254 KFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKT 313
             KF++T  FA STPALLFNLELDTLRADLG+LGFP KDLHYRFLSQF PVFYIR REYSKT
Sbjct:   208 KFVET--FASSTPALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSKT 265

Query:   314 VPVAPFTINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKEELLRVLGLQE 373
             V VAPF +NY+GALFRQYPGPWQVMLKQ D S+ACVAES TRFTL ETKEELL+VLGLQE
Sbjct:   266 VAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAESPTRFTLGETKEELLQVLGLQE 325

Query:   374 EEGSSLQFLRRGYKNATWWEEDVDLELSSAWRS 406
             E+GSSL+FLRRGYK+ATWWEEDV+LE SS WR+
Sbjct:   326 EKGSSLEFLRRGYKSATWWEEDVELEASSNWRN 358

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009571 "proplastid stroma" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=IMP

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.208.63.1	hypothetical protein (315 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	grail3.0005049301	hypothetical protein (184 aa)				•	•				0.469

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	406
pfam09353	205	pfam09353, DUF1995, Domain of unknown function (DU	1e-35

>gnl|CDD|220198 pfam09353, DUF1995, Domain of unknown function (DUF1995)

 Score =  129 bits (327), Expect = 1e-35
 Identities = 69/283 (24%), Positives = 95/283 (33%), Gaps = 82/283 (28%)

Query: 83  PKSYEVLAADAANSLAFALQDGKTRL--EIDFPPLPSNISSYKGSSDEFIDANIQLALAV 140
           P   E     A  +L  AL+DGKTRL  E+ FP L                    LAL +
Sbjct: 2   PADLEEAEEQAKEALLAALKDGKTRLQVELRFPGLKLM----------------PLALRL 45

Query: 141 VRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIR 200
            R L E    R  +VFPD      A R +      I                    S  +
Sbjct: 46  ARALAEEG-RRLLVVFPDAGAAALARRDWGDLAFKILS-----------------LSDRK 87

Query: 201 NTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEKYVVLFEEAYSPLCGKFLKTEK 260
            + D    D             + + +     +L  +E       E              
Sbjct: 88  LSEDESKID------------DILILVAPQPSDLEEVEA----LCELAG----------- 120

Query: 261 FAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFT 320
                P ++ N  L+   A  GI G  +++   RFLS +   +Y+R           P  
Sbjct: 121 ---GRPVIMLNPRLEDAAAV-GI-GSVARERRRRFLSTWEVAYYLR-----------PLE 164

Query: 321 INYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETKE 363
               GALFR YPGPWQ+  K+ +  Y  VAE E+R    E   
Sbjct: 165 RG--GALFRCYPGPWQLF-KEDNGGYRLVAEFESRPDPEEIDA 204

This family of proteins are functionally uncharacterized. Length = 205

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	406
PF09353	209	DUF1995: Domain of unknown function (DUF1995); Int	100.0
PLN02842	505	nucleotide kinase	100.0

>PF09353 DUF1995: Domain of unknown function (DUF1995); InterPro: IPR018962 This family of proteins are functionally uncharacterised

Probab=100.00  E-value=1.3e-49  Score=372.72  Aligned_cols=206  Identities=39%  Similarity=0.617  Sum_probs=176.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCce--EEEEcCCCCCCCCCCCCCchHHHHhhHHHHHHHHHHHHHhcCCceEEEccCh
Q 015456           82 KPKSYEVLAADAANSLAFALQDGKTR--LEIDFPPLPSNISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDK  159 (406)
Q Consensus        82 lP~s~~eav~qA~~Av~~AL~dG~~R--leVEFP~L~~~~d~~~g~~d~~~~~n~~La~~fa~~l~~~~G~rvrV~fPDa  159 (406)
                      ||.|++|++.||++|+++||++|.+|  +|++||+|..              .+++++++|++.| .+.|++++++|||+
T Consensus         1 lP~s~~ea~~qA~~Av~~Al~~g~~r~~ve~~fP~l~~--------------~~~~la~~~~~~l-~~~~~~~~~~~pd~   65 (209)
T PF09353_consen    1 LPSSLEEAVEQAAEAVQAALEDGDSRQLVELEFPGLNP--------------SNMPLAREFARKL-AASGRRVRVVFPDA   65 (209)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEECCCcch--------------hHHHHHHHHHHHH-HhcCceEEEEcCCh
Confidence            79999999999999999999999988  5555998831              4589999999999 55789999999999


Q ss_pred             hhHHHHHHHhhhcccCCCCeeeeeccCCCCCccccccccccccCCCCCcccccccCCCCCCCcEEEEEeccCCChHHHHH
Q 015456          160 PEKGRASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIRNTLDFDFDDQEEGRWQSDEPPTLYVFINCSTRELSVIEK  239 (406)
Q Consensus       160 geaalAkr~w~~~~~~~~Gv~i~sLd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~VvV~Ps~~el~~vE~  239 (406)
                      |++++|+++|++..     +++.+|+++...                     ...   ...++++|||+|++.+++++|+
T Consensus        66 g~~alA~~~~~~~~-----~~~~~l~~~~~~---------------------~~~---~~~~~~~vvv~p~~~~l~~~e~  116 (209)
T PF09353_consen   66 GEAALARRDWGDGS-----FKIASLDDWSSS---------------------EDE---SKFDDILVVVAPSPQELDDVEK  116 (209)
T ss_pred             HHHHHHhccccCCC-----eEEeeccCcccc---------------------ccc---cccCCEEEEEECChhhHHHHHH
Confidence            99999999996664     456677664420                     000   0115999999999999999999


Q ss_pred             HHHHhhhhcCcccccchhhhhccCCccEEEEcCcchhhccccCCCCCchHHHHHHhhcCcceeEEeEeeccCCCcCCCCc
Q 015456          240 YVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPF  319 (406)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~~a~~rPvVllNp~Ld~lr~D~gviGf~~R~lr~~FLstFe~vYyLr~l~y~~t~~~~Pf  319 (406)
                      ||                  +..++||||||||+|++++++.  ||+++|++|++|+++|++||||||+.|++       
T Consensus       117 ~~------------------~~~~~rpvvl~Np~l~~~~~~g--~g~~~r~~~~~Fl~~fe~vY~l~~l~~~~-------  169 (209)
T PF09353_consen  117 LC------------------EAAGGRPVVLLNPQLEDVRSVG--FGFPGRKLRERFLSSFETVYYLRPLRISG-------  169 (209)
T ss_pred             HH------------------HhcCCCeEEEEecccccCCccc--cccccHHHHHHHHhhceEEEEEEeeccCC-------
Confidence            99                  4455699999999999776554  99999999999999999999999998765       


Q ss_pred             ccccceEEEeEeCCCcEEEEEccCCceEEeeecccCCCchHHH
Q 015456          320 TINYSGALFRQYPGPWQVMLKQADSSYACVAESETRFTLSETK  362 (406)
Q Consensus       320 i~n~~GaLfR~YPgpWQV~~~~~~g~Y~~Vae~~~RPs~~E~~  362 (406)
                          .|+||||||||||||+++++|+|+||+++++|||++|+.
T Consensus       170 ----~gal~r~yP~~Wqv~~~~~~~~y~~v~~~~~rP~~~e~~  208 (209)
T PF09353_consen  170 ----NGALFRCYPGPWQVFREDDDGEYECVAEFEERPTYEELE  208 (209)
T ss_pred             ----cEEEEEeCCCCcEEEEEcCCCcEEEEEecccCCChHHhh
Confidence                599999999999999999889999999999999888764

>PLN02842 nucleotide kinase

Probab=100.00  E-value=1.3e-49  Score=414.33  Aligned_cols=242  Identities=17%  Similarity=0.252  Sum_probs=207.3

Q ss_pred             hhhhccccCCCCCCcCC---CCCCCHHH---HHHHHHHHHHHHHHcCCceEEEE--cCCCCCCCCCCCCCchHHHHhhHH
Q 015456           64 KAQTASSSLGPKAGVAI---YKPKSYEV---LAADAANSLAFALQDGKTRLEID--FPPLPSNISSYKGSSDEFIDANIQ  135 (406)
Q Consensus        64 ~~~~a~~~~~~~~g~~~---~lP~s~~e---av~qA~~Av~~AL~dG~~RleVE--FP~L~~~~d~~~g~~d~~~~~n~~  135 (406)
                      |+.+|++.++.+.|.++   ..|++.+.   .+++|.+||++|++||++|++||  ||+|++++|+|+.|+     + ++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~g~~r~~~~~~~pel~~~~~~~~~~~-----~-~~  285 (505)
T PLN02842        212 KTKKASPVQDKWRGIPTRLNNIPHSREIRAYFYDDVLQATQRAVNDGRTRLKVEINIPELNPEMDVYRIGT-----L-ME  285 (505)
T ss_pred             ccccccchhhhhccCchhhcCCCChHHHHHHHHHHHHHHHHHHHhCCcceEEEEEecCccccccccccchh-----H-HH
Confidence            44578889999999887   46999997   99999999999999999999997  999999999999998     5 89


Q ss_pred             HHHHHHHHHHHhcCCceEEEccC-hhhHHH--------------HHHHhhhcccCCCCeeeeeccCCCCCcccccccccc
Q 015456          136 LALAVVRKLQERMETRACIVFPD-KPEKGR--------------ASRLFKRALDSIDGITIGSLDDVPTGAVRSFFSSIR  200 (406)
Q Consensus       136 La~~fa~~l~~~~G~rvrV~fPD-ageaal--------------Akr~w~~~~~~~~Gv~i~sLd~~~~~~~~~~~~~~~  200 (406)
                      ||++|+..| ++.|++||||||| +|++++              |+++|++.++.=+=|+++.+                
T Consensus       286 l~~~~~~~~-~~~~~~~kv~~~~~~g~~~~~~~~~~~~~~~~~~~~~dw~~~~~~~~~~~~~~~----------------  348 (505)
T PLN02842        286 LVRVLALSF-ADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFVKIGAI----------------  348 (505)
T ss_pred             HHHHHHHHH-hhcCCceEEEecCCcchhHhccCccccccchhhhhhcccccccccccceeeccc----------------
Confidence            999999999 8999999999999 899999              77777776542111122221                


Q ss_pred             ccCCCCCcccccccCCCCCCCcEEEEEeccC-C---ChHHHHHHHHHhhhhcCcccccchhhhhccCCccEEEEcCcchh
Q 015456          201 NTLDFDFDDQEEGRWQSDEPPTLYVFINCST-R---ELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNLELDT  276 (406)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~d~~VvV~Ps~-~---el~~vE~l~~~~~~~~~~~~~~~~~~~~~a~~rPvVllNp~Ld~  276 (406)
                                .+..++  ++|++||+|+|++ +   ++++||+||                  +.+++|||||+||+|++
T Consensus       349 ----------~~~~~~--~~d~~~i~v~P~~~v~~~~~~~~e~~~------------------~~~~~rpvillnp~LeD  398 (505)
T PLN02842        349 ----------GAKEVD--EEDDMFILVAPQNAVGNCIIDDLQAMT------------------TAAGKRPVILVNPRLKD  398 (505)
T ss_pred             ----------ccCCCC--CCCcEEEEEcCCccccccchHHHHHHH------------------HHhCCCeEEEECCcccc
Confidence                      112334  7789999999999 4   999999999                  78899999999999998


Q ss_pred             hccccCCCC-CchHHHHHHhhcCcceeEEeEeeccCCCcCCCCcccccceEEEeEeCCCcEEEEEcc----CCceEEeee
Q 015456          277 LRADLGILG-FPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQA----DSSYACVAE  351 (406)
Q Consensus       277 lr~D~gviG-f~~R~lr~~FLstFe~vYyLr~l~y~~t~~~~Pfi~n~~GaLfR~YPgpWQV~~~~~----~g~Y~~Vae  351 (406)
                      +.+..| || +++|++|++|+++|++|||||||++.+|++      +++|||+|+||++||||++++    +++|+++++
T Consensus       399 ~~~~vG-ig~~~~R~~R~~f~~t~~~~Y~~~~l~~~~~~~------~~~gal~~~yp~~w~l~~~~~~~~~~~~y~~~~~  471 (505)
T PLN02842        399 LPGSSG-IMQTMGREQRLEYAASFENCYSFRLLYYAGTQY------PIMGALRMSYPYRYELYKRVDEENGKEKYIILAT  471 (505)
T ss_pred             cccccc-hhHHHHHHHHHHHHHHhhheeEEEecccccccc------ccceeeeecCCCCeeEEEecCccccCcceEEeee
Confidence            777777 67 999999999999999999999999777654      579999999999999998752    458999999


Q ss_pred             cccCCCchHHHHHHH
Q 015456          352 SETRFTLSETKEELL  366 (406)
Q Consensus       352 ~~~RPs~~E~~~~Ll  366 (406)
                      +++|| .+|.++.+|
T Consensus       472 ~~~~P-~~e~i~~~~  485 (505)
T PLN02842        472 FSERP-TPDEINDAF  485 (505)
T ss_pred             cCCCC-CHHHHHHHh
Confidence            99999 778788777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	406
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.8 bits (175), Expect = 1e-13
 Identities = 57/420 (13%), Positives = 107/420 (25%), Gaps = 136/420 (32%)

Query: 3   MSQMASTLASPLSFLLLRHSLSPYIPRQHSVSSPLSKHQHSHQILCAKKSSSSNNSKQQK 62
           MS + +    P    ++         R ++ +   +K+  S                Q  
Sbjct: 95  MSPIKTEQRQPS---MMTRMYIEQRDRLYNDNQVFAKYNVS--------------RLQPY 137

Query: 63  PKAQTASSSLGPKAGVAIYKP----KSYEVLAADAANSLAFALQDGKTRLEIDFPPLPSN 118
            K + A   L P   V I       K+   +A D            K + ++DF     N
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKT--WVALD-------VCLSYKVQCKMDFKIFWLN 188

Query: 119 ISSYKGSSDEFIDANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLF-----KRAL 173
           + +   S +  ++   +L   +      R +  + I       +    RL      +  L
Sbjct: 189 LKNCN-SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 174 DSIDGITIGSLDDVPTGAVRSFFSSIRNTLD-FDFDDQEEGRWQSDEPPTLYVFINC--- 229
             +       L +V                + F+                     +C   
Sbjct: 248 L-V-------LLNV----------QNAKAWNAFNL--------------------SCKIL 269

Query: 230 -STRELSVIEKYVVLFEEAYSPLCGKFLKTEKFAMSTPALLFNL-ELDTLRADLGILGFP 287
            +TR   V +                   T   ++   ++     E+ +L      L   
Sbjct: 270 LTTRFKQVTDFLSA-------------ATTTHISLDHHSMTLTPDEVKSLLLK--YLDCR 314

Query: 288 SKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTINYSGALFRQYPGPWQVMLKQADSSYA 347
            +DL         P      RE        P  ++      R     W    K  +    
Sbjct: 315 PQDL---------P------REVLT---TNPRRLSIIAESIRDGLATWD-NWKHVNCD-- 353

Query: 348 CVAESETRFTLSETKEELLRVLGLQEEEGSSLQFLRRGYKNATWWEEDVDLE---LSSAW 404
                     L+   E  L V  L+  E       R+ +   + +     +    LS  W
Sbjct: 354 ---------KLTTIIESSLNV--LEPAE------YRKMFDRLSVFPPSAHIPTILLSLIW 396

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 53/349 (15%), Positives = 98/349 (28%), Gaps = 109/349 (31%)

Query: 127 DEFI-DANIQLALAVVRKLQERMETRACIVFPDKPEKGRASRLFKRALDSIDGITIGSLD 185
           D F+ + + +    + + +  + E    I+  D        RLF             +L 
Sbjct: 27  DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS--GTLRLF------------WTLL 72

Query: 186 DVPTGAVRSFFSSIRNTLDFDF---DDQEEGRWQSDEPPTLYV-FINCSTRELSVIEKYV 241
                 V+ F   +    ++ F     + E R Q      +Y+   +    +  V  KY 
Sbjct: 73  SKQEEMVQKFVEEVLRI-NYKFLMSPIKTEQR-QPSMMTRMYIEQRDRLYNDNQVFAKYN 130

Query: 242 VLFEEAYSPL--------------------CGK------FLKTEKFAMSTPALLF--NL- 272
           V   + Y  L                     GK         + K        +F  NL 
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 273 ELDTLRADLGILGFPSKDLHYRFLSQFTPVFYIRIREYSKTVPVAPFTI-NYSGALFRQY 331
             ++    L +L    + L Y    Q  P +  R  ++S  + +   +I      L +  
Sbjct: 191 NCNSPETVLEML----QKLLY----QIDPNWTSRS-DHSSNIKLRIHSIQAELRRLLKSK 241

Query: 332 PGP---------W------------QVMLKQADSSYACVAESETR-----------FTLS 359
           P                        +++L            + T             T  
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301

Query: 360 ETKEELLRVLGLQEEE-------GSSL------QFLRRGYKNATW--WE 393
           E K  LL+ L  + ++        +        + +R G   ATW  W+
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG--LATWDNWK 348

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00