Citrus Sinensis ID: 015503

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MSIASCFFASASLSTISNNNTPELNLNRPSPLPLRLSVTSPPSSSSFTTPLSLHLHHHRRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNNDGDGDGENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKVLSG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccccccccccccccccccccEEEEccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccHccHHHHHHHHHHHcccHHHccHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccEEcc
Coil and Loop (DISEMBL)
msiascffasaslstisnnntpelnlnrpsplplrlsvtsppssssfttplslhlhhhrrpptslflafstptssgggggddnynnnggsggggggnnndgdgdgenagekNREEALIVLAEAKRSMESLPKDLAAAIkdgripgaVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSfavhagpiskffyncpdnAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKavdkssegevenvpiLSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQkahedekvlsg
Flexible Loop (DISEMBL)
MSIASCFFASASLstisnnntpelnlNRPSPLPLRLSVTSPPSSSSFTTPLSLHLHHHRRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNNDGDGDGENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARkavdkssegevenvpILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQkahedekvlsg
Low Complexity Region (SEG)
MSIASCFFASASLSTISNNNTpelnlnrpsplplrlsvtsppssssfttplslhlhhhrrpptslFLAFSTPTssgggggddnynnnggsggggggnnndgdgdgENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKVLSG
Disordered region (IsUnstruct)
*************************************************************************************************************************************LAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAV******EVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ***********
Disordered Region (DISOPRED)
*S*ASCFFASASL************LNRPSP*********************************************************************************REEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTV**************KFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINA***************PILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLI**************
Disordered Region (DISEMBL)
MSIASCFFASASLSTISNNNTPELNLNRPSPLPLRLS*********************RRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNNDGDGDGENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARK**********ENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAH********
Disordered Region (DISPRO)
**I**CFFASASLSTISNNNTPELNLNRPSPLPLRLSVTSPPSSSSFTTPLSLHLHHHRRPPTSLFLAFSTP******G****************************AGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQK**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSIASCFFASASLSTISNNNTPELNLNRPSPLPLRLSVTSPPSSSSFTTPLSLHLHHHRRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNNDGDGDGENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKVLSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
224059548	398	predicted protein [Populus trichocarpa]	0.930	0.947	0.688	1e-150
255544908	392	conserved hypothetical protein [Ricinus	0.945	0.977	0.719	1e-149
307136073	397	hypothetical protein [Cucumis melo subsp	0.711	0.725	0.829	1e-139
449444897	394	PREDICTED: uncharacterized protein LOC10	0.711	0.730	0.822	1e-138
18416870	386	uncharacterized protein [Arabidopsis tha	0.711	0.746	0.798	1e-136
297811391	385	hypothetical protein ARALYDRAFT_909228 [	0.711	0.748	0.791	1e-135
224104171	289	predicted protein [Populus trichocarpa]	0.711	0.996	0.812	1e-135
356543604	364	PREDICTED: uncharacterized protein LOC10	0.874	0.972	0.701	1e-135
51971208	386	unknown protein [Arabidopsis thaliana]	0.711	0.746	0.795	1e-135
225450009	380	PREDICTED: uncharacterized protein LOC10	0.718	0.765	0.793	1e-134

>gi|224059548|ref|XP_002299901.1| predicted protein [Populus trichocarpa] gi|222847159|gb|EEE84706.1| predicted protein [Populus trichocarpa]

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/424 (68%), Positives = 333/424 (78%), Gaps = 47/424 (11%)

Query: 1   MSIASCFFASASLSTISNNNTPELNLNRPSPLPLRLSVTSPPSSSSFTTPLSLHLH---- 56
           M+IA+CFF +    ++ NN  P+L +N     P R          SF    S HLH    
Sbjct: 1   MAIATCFFTA----SLPNNTNPKL-IN-----PHR----------SFHPSSSHHLHLRLS 40

Query: 57  ----------------HHRRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNND 100
                            HR P   LF+A    TSSGGG G  N+    G GGG   +NN+
Sbjct: 41  LPSPFPSSPRHHHHHNDHRLP---LFIA----TSSGGGYGGINHPPPCGGGGGDSSDNNN 93

Query: 101 GDGDGENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLF 160
            +GDG++A +KNREEA++VLAEAKRS+ESLP+DLAAAI+ GRIPGAV+SR+FELE S   
Sbjct: 94  HNGDGDSAEDKNREEAMMVLAEAKRSVESLPQDLAAAIRAGRIPGAVVSRFFELENSRFL 153

Query: 161 KWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMA 220
           +WLMQF GF+ERLLADDLFLAKV  ECGVG+FTKTAAEY+RRRENFF ELE+VFADVVMA
Sbjct: 154 RWLMQFDGFRERLLADDLFLAKVGMECGVGMFTKTAAEYERRRENFFNELEVVFADVVMA 213

Query: 221 IIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIAR 280
           IIADFMLV+LPAPTV+LRS  A +AGPI+KFF+NCPDNAFQVAL+GTSYSLLQRLGAIAR
Sbjct: 214 IIADFMLVFLPAPTVSLRSPLAGNAGPIAKFFHNCPDNAFQVALAGTSYSLLQRLGAIAR 273

Query: 281 NGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNL 340
           NGAKLF VGT SSLVGTAVTN LINARKAVDKSS GEVENVPILSTSVAYGVYMAVSSNL
Sbjct: 274 NGAKLFVVGTASSLVGTAVTNTLINARKAVDKSSAGEVENVPILSTSVAYGVYMAVSSNL 333

Query: 341 RYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDE 400
           RYQ+LAGV+EQRILEP+LHQHKL+L A+CFAVRTGNT+LGSLLWVDYARLIGIQKAHE+ 
Sbjct: 334 RYQILAGVVEQRILEPMLHQHKLMLGALCFAVRTGNTFLGSLLWVDYARLIGIQKAHEEH 393

Query: 401 KVLS 404
           K L+
Sbjct: 394 KELT 397

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544908|ref|XP_002513515.1| conserved hypothetical protein [Ricinus communis] gi|223547423|gb|EEF48918.1| conserved hypothetical protein [Ricinus communis]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 297/413 (71%), Positives = 335/413 (81%), Gaps = 30/413 (7%)

Query: 1   MSIASCFFASASLSTISNNNTPELNLNRPSPLPLRLSVTSPPS----SSSFTTPLSLHLH 56
           M+I++CFF +ASLS    N+ P+L+L+    LP   S++SPP     S    +PLSL  H
Sbjct: 1   MAISACFF-TASLS----NSNPKLDLH----LPFVPSLSSPPHHLRISLPSPSPLSLRQH 51

Query: 57  HHRR-----PPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNNDGDGDGENAGEK 111
           +HR      P   LF+ F +    GG   ++N    GG              +  NAG++
Sbjct: 52  YHRHHNNSDPLLPLFVPFVSGGDGGGSFNNNNGGGGGGGD------------NDGNAGDR 99

Query: 112 NREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKE 171
           NREE ++VLAEAKRS++SLPKDLAAAI+ GRIPGAV+SR+  LE SGLF+WL+QFGGFKE
Sbjct: 100 NREEVILVLAEAKRSIDSLPKDLAAAIQAGRIPGAVVSRFLALENSGLFRWLLQFGGFKE 159

Query: 172 RLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLP 231
           RLLADDLFLAKV  ECGVGIFTKTAAEY+RRRENFFKELEIVFADVVMAIIADFMLVYLP
Sbjct: 160 RLLADDLFLAKVGIECGVGIFTKTAAEYNRRRENFFKELEIVFADVVMAIIADFMLVYLP 219

Query: 232 APTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTT 291
           APTV+LR   A  AGPI+KFF+NCPDNAFQVAL+GTSYSLLQRLGAI RNGAKLFAVGTT
Sbjct: 220 APTVSLRPPLAGTAGPIAKFFHNCPDNAFQVALAGTSYSLLQRLGAIVRNGAKLFAVGTT 279

Query: 292 SSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQ 351
           SSLVGTAVTNALINARKAVDKSS GEVENVPI+STSVAYGVYMAVSSNLRYQVLAGVIEQ
Sbjct: 280 SSLVGTAVTNALINARKAVDKSSAGEVENVPIVSTSVAYGVYMAVSSNLRYQVLAGVIEQ 339

Query: 352 RILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKVLS 404
           RILEPLLHQHKL+LSAICFAVRTGNTYLGSLLWVDYARLIGIQKA E++K L+
Sbjct: 340 RILEPLLHQHKLMLSAICFAVRTGNTYLGSLLWVDYARLIGIQKAQEEQKELA 392

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136073|gb|ADN33922.1| hypothetical protein [Cucumis melo subsp. melo]

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/288 (82%), Positives = 265/288 (92%)

Query: 107 NAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQF 166
           NAG+KN+ EAL+VLAEA  S+E LPKDLA AI+ GRIPG+V++++ EL+KS L +WLMQF
Sbjct: 110 NAGDKNKAEALLVLAEAGWSLECLPKDLAVAIEAGRIPGSVVTKFLELQKSALMRWLMQF 169

Query: 167 GGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFM 226
           GGFKERLLADDLFLAKV  ECGVG+FTKTAAEY+RRRE FF ELEIVFADVVMAIIADFM
Sbjct: 170 GGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFM 229

Query: 227 LVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLF 286
           LVYLPAPTV+LR   +V+AG I+KFF+ CPDNAFQVALSGTSYSLLQR G+IARNGAKLF
Sbjct: 230 LVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQVALSGTSYSLLQRFGSIARNGAKLF 289

Query: 287 AVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLA 346
           AVGTTSSLVGTAVTNALINARKA+DK+   EVENVPILSTSV YGVYMAVSSNLRYQVLA
Sbjct: 290 AVGTTSSLVGTAVTNALINARKAIDKNGAAEVENVPILSTSVGYGVYMAVSSNLRYQVLA 349

Query: 347 GVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ 394
           GVIEQRILEP+LHQHKL+LSAICFAVRTGNT+LGSLLWVDYARLIG+Q
Sbjct: 350 GVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 397

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444897|ref|XP_004140210.1| PREDICTED: uncharacterized protein LOC101209682 [Cucumis sativus] gi|449482521|ref|XP_004156310.1| PREDICTED: uncharacterized LOC101209682 [Cucumis sativus]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/288 (82%), Positives = 266/288 (92%)

Query: 107 NAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQF 166
           NAG+KN+ EAL+VLAEA +S+ESLPKDLA AI+ GRIPG+V++++ EL+KS + +WLMQF
Sbjct: 107 NAGDKNKAEALLVLAEAGQSLESLPKDLAVAIEAGRIPGSVVTKFLELQKSAIMRWLMQF 166

Query: 167 GGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFM 226
           GGFKERLLADDLFLAKV  ECGVG+FTKTAAEY+RRRE FF ELEIVFADVVMAIIADFM
Sbjct: 167 GGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFM 226

Query: 227 LVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLF 286
           LVYLPAPTV+LR   +V+AG I+KFF+ CPDNAFQ+ALSGTSYSLLQR GAIARNGAKLF
Sbjct: 227 LVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQIALSGTSYSLLQRFGAIARNGAKLF 286

Query: 287 AVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLA 346
           AVGTTSSLVGTA TNALINARKA+DK+   EVENVPILSTSV YGVYMAVSSNLRYQV+A
Sbjct: 287 AVGTTSSLVGTAATNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVVA 346

Query: 347 GVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ 394
           GVIEQRILEP+LHQHKL+LSAICFAVRTGNT+LGSLLWVDYARLIG+Q
Sbjct: 347 GVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 394

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416870|ref|NP_568280.1| uncharacterized protein [Arabidopsis thaliana] gi|14586377|emb|CAC42908.1| putative protein [Arabidopsis thaliana] gi|20268752|gb|AAM14079.1| unknown protein [Arabidopsis thaliana] gi|21281149|gb|AAM45049.1| unknown protein [Arabidopsis thaliana] gi|27311697|gb|AAO00814.1| putative protein [Arabidopsis thaliana] gi|30725614|gb|AAP37829.1| At5g12470 [Arabidopsis thaliana] gi|51970560|dbj|BAD43972.1| unknown protein [Arabidopsis thaliana] gi|332004431|gb|AED91814.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/288 (79%), Positives = 265/288 (92%)

Query: 110 EKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGF 169
           ++NR EA+++L E+   +ESLPKDLAAAI+ GRIPG+V++R+ EL+KS + +WLMQFGGF
Sbjct: 99  DRNRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGF 158

Query: 170 KERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVY 229
           +ERLLADDLF+AK+  ECGVGIFTKTAAEY+RRRENFF ELE+VFADV MAIIADFMLVY
Sbjct: 159 RERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVY 218

Query: 230 LPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVG 289
           LPAPTV+LR   A+ AG ISKFF+NCPDNAFQVALSGTSY+LLQRLGAI RNGAKLFAVG
Sbjct: 219 LPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVG 278

Query: 290 TTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVI 349
           TTSSLVGTA+TNA I ARKAVD++SEGEVE VPI+STSVAYGVYMAVSSNLRYQ++AGVI
Sbjct: 279 TTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVI 338

Query: 350 EQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAH 397
           EQR+LEP+LHQHKL LSA+CFAVRTGNT+LGSLLWVDYARLIGIQK+H
Sbjct: 339 EQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKSH 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811391|ref|XP_002873579.1| hypothetical protein ARALYDRAFT_909228 [Arabidopsis lyrata subsp. lyrata] gi|297319416|gb|EFH49838.1| hypothetical protein ARALYDRAFT_909228 [Arabidopsis lyrata subsp. lyrata]

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/288 (79%), Positives = 264/288 (91%)

Query: 110 EKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGF 169
           ++NR EA+++L E+   +ESLPKDLAAAI+ GRIPG+V++R+ EL+KS + +WLMQFGGF
Sbjct: 98  DRNRNEAMLLLKESGTGLESLPKDLAAAIESGRIPGSVITRFLELQKSAVMRWLMQFGGF 157

Query: 170 KERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVY 229
           +ERLLADDLF+AK+  ECGVGIFTKTAAEY+RRRENFF ELE+VFADV MAIIADFMLVY
Sbjct: 158 RERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVY 217

Query: 230 LPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVG 289
           LPAPTV+LR   A+ AG ISKFF+NCPDNAFQVALSGTSY+LLQRLGAI RNGAKLFAVG
Sbjct: 218 LPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVG 277

Query: 290 TTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVI 349
           TTSSLVGTA+TNA I AR+AVD++SE EVE VPI+STSVAYGVYMAVSSNLRYQ++AGVI
Sbjct: 278 TTSSLVGTAITNAFIKARRAVDQTSESEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVI 337

Query: 350 EQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAH 397
           EQR+LEP+LHQHKL LSA+CFAVRTGNT+LGSLLWVDYARLIGIQK+H
Sbjct: 338 EQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKSH 385

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104171|ref|XP_002313346.1| predicted protein [Populus trichocarpa] gi|222849754|gb|EEE87301.1| predicted protein [Populus trichocarpa]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/288 (81%), Positives = 265/288 (92%)

Query: 117 LIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGFKERLLAD 176
           ++VLAEAKRS+ES PKDLAAAI+ G+IPG+V+SR+ ELE+S  F WLMQF GF+ERLLAD
Sbjct: 1   MVVLAEAKRSLESFPKDLAAAIQAGKIPGSVVSRFLELEESRFFGWLMQFDGFRERLLAD 60

Query: 177 DLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVA 236
           DLF+AKV  EC VG+FTKTAAEY+RRRENFF ELE+VFADVVMAIIADFMLVYLPAPTV+
Sbjct: 61  DLFMAKVGMECFVGMFTKTAAEYERRRENFFNELEVVFADVVMAIIADFMLVYLPAPTVS 120

Query: 237 LRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVG 296
           LR   A +AG I+KF +NCPDNAFQVAL+GTSYSLLQRLGAIARNGAKLFAVGT SSL+G
Sbjct: 121 LRPPLAGNAGSIAKFLHNCPDNAFQVALAGTSYSLLQRLGAIARNGAKLFAVGTASSLLG 180

Query: 297 TAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRILEP 356
           TAVTNALINARKAVDKS+ GEVENVPI+STSVAYGVYMAVSSNLRYQ+LAGVIEQRILEP
Sbjct: 181 TAVTNALINARKAVDKSATGEVENVPIVSTSVAYGVYMAVSSNLRYQILAGVIEQRILEP 240

Query: 357 LLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKVLS 404
           +LHQHK++LSA+ FAVRTGNT+LGSLLWVDYAR+IGIQKA E+ K L+
Sbjct: 241 MLHQHKIMLSALSFAVRTGNTFLGSLLWVDYARMIGIQKAQEEHKELT 288

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543604|ref|XP_003540250.1| PREDICTED: uncharacterized protein LOC100811998 [Glycine max]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 252/359 (70%), Positives = 285/359 (79%), Gaps = 5/359 (1%)

Query: 36  LSVTSPPSSSSFTTPLSLHLHHHRRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGG 95
           LS  S PS S  T  L   L   RRP    +     P  S  GG         G  G GG
Sbjct: 11  LSSKSVPSFSLSTPSLCFRLTPLRRPTDRFY-----PLCSSAGGPGGGSFGGHGGPGHGG 65

Query: 96  GNNNDGDGDGENAGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELE 155
                G G  +N   + + EAL+V+AEA RS+ES+P DLAAAIKDG+IP +V+SR+ ELE
Sbjct: 66  HGGGGGGGGHDNDDNERKNEALLVVAEAGRSLESVPADLAAAIKDGKIPASVVSRFLELE 125

Query: 156 KSGLFKWLMQFGGFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFA 215
           KS  F+WL+QF GF+ERLLADDLFLAKV  ECGVG+FTKTAAEY++RRENFF ELEIVFA
Sbjct: 126 KSPFFRWLLQFTGFRERLLADDLFLAKVAMECGVGVFTKTAAEYEKRRENFFNELEIVFA 185

Query: 216 DVVMAIIADFMLVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRL 275
           DV MAIIADFMLVYLPAPTVALR   A+ AGPI+KFF+ CPDNAFQVALSG SYSL+QR+
Sbjct: 186 DVAMAIIADFMLVYLPAPTVALRPPLALTAGPIAKFFHGCPDNAFQVALSGASYSLIQRV 245

Query: 276 GAIARNGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMA 335
           GAI RNGAKLFAVGT SSLVGTA+TNA INA+KAV+K+SEGE+ENVPILSTS AYGVYMA
Sbjct: 246 GAIVRNGAKLFAVGTASSLVGTAMTNAFINAKKAVNKTSEGEIENVPILSTSAAYGVYMA 305

Query: 336 VSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ 394
           VSSNLRYQVLAG+IEQR+LEPLLHQHKLILSA+CFAVRTGNTYLGSLLWVDYAR +G+Q
Sbjct: 306 VSSNLRYQVLAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARFVGVQ 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51971208|dbj|BAD44296.1| unknown protein [Arabidopsis thaliana]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/288 (79%), Positives = 264/288 (91%)

Query: 110 EKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGF 169
           ++NR EA+++L E+   +ESLPKDLAAAI+ GRIPG+V++R+ EL+KS + +WLMQFGGF
Sbjct: 99  DRNRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGF 158

Query: 170 KERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVY 229
           +ERLLADDLF+AK+  ECGVGIFTKTAAEY+RRRENFF ELE+VFADV MAIIADFMLVY
Sbjct: 159 RERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVY 218

Query: 230 LPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVG 289
           LPAPTV+LR   A+ AG ISKFF+NCPDNAFQVALSGTSY+LLQRLGAI RNGAKLFAVG
Sbjct: 219 LPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVG 278

Query: 290 TTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVI 349
           TTSSLVGTA+TNA I ARKAVD++SEGEVE VPI+STSVAYGVYMAVSSNLRYQ++ GVI
Sbjct: 279 TTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVDGVI 338

Query: 350 EQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAH 397
           EQR+LEP+LHQHKL LSA+CFAVRTGNT+LGSLLWVDYARLIGIQK+H
Sbjct: 339 EQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKSH 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450009|ref|XP_002274472.1| PREDICTED: uncharacterized protein LOC100255131 [Vitis vinifera]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/291 (79%), Positives = 260/291 (89%)

Query: 108 AGEKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFG 167
           A E+NR EA++ LAE  RS++SLPKDLAAA++ GRIPGA++SRYFELEKS +F+WL+QFG
Sbjct: 90  AEERNRTEAILALAEMGRSLDSLPKDLAAAVQAGRIPGAIVSRYFELEKSAVFRWLLQFG 149

Query: 168 GFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFML 227
           GFKERLLADDLFLAKV  ECGVGIFTKTAAE +RRRE F KEL+ VFADVVMAIIADFML
Sbjct: 150 GFKERLLADDLFLAKVAMECGVGIFTKTAAELERRREKFSKELDFVFADVVMAIIADFML 209

Query: 228 VYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFA 287
           V+LPAPTV+L+   AV AG ++KFFY CPDNAFQVAL+GTSYS LQR+GAI RNGAKLFA
Sbjct: 210 VWLPAPTVSLKPPLAVSAGALAKFFYRCPDNAFQVALAGTSYSFLQRIGAIVRNGAKLFA 269

Query: 288 VGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAG 347
           VGT +SLVGT +TNALINARKA DKS   E E+VPI+STSVAYGVYMAVSSNLRYQVLAG
Sbjct: 270 VGTGASLVGTGITNALINARKAFDKSFAAEAEDVPIISTSVAYGVYMAVSSNLRYQVLAG 329

Query: 348 VIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHE 398
           VIEQRILEPLLHQHKL+LSA+CFAVRTGNT+LGSL+WVDYAR IGIQK  E
Sbjct: 330 VIEQRILEPLLHQHKLMLSAVCFAVRTGNTFLGSLMWVDYARWIGIQKIRE 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:505006615	386	AT5G12470 "AT5G12470" [Arabido	0.711	0.746	0.798	6.4e-125
TAIR|locus:2063136	735	AT2G40400 [Arabidopsis thalian	0.696	0.383	0.388	1.1e-46
TAIR|locus:2078446	745	AT3G56140 "AT3G56140" [Arabido	0.696	0.378	0.381	2.2e-45
TAIR|locus:2065649	432	LCD1 "AT2G37860" [Arabidopsis	0.671	0.629	0.307	4.4e-29
TAIR|locus:2158155	433	RER1 "AT5G22790" [Arabidopsis	0.674	0.630	0.300	1.9e-28
TAIR|locus:2077828	339	AT3G08630 "AT3G08630" [Arabido	0.550	0.657	0.334	1.4e-25
TAIR|locus:2077838	337	AT3G08640 "AT3G08640" [Arabido	0.545	0.655	0.323	5.3e-24
TAIR|locus:2176826	521	AT5G24690 "AT5G24690" [Arabido	0.543	0.422	0.232	1.1e-08

TAIR|locus:505006615 AT5G12470 "AT5G12470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1202 (428.2 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
 Identities = 230/288 (79%), Positives = 265/288 (92%)

Query:   110 EKNREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQFGGF 169
             ++NR EA+++L E+   +ESLPKDLAAAI+ GRIPG+V++R+ EL+KS + +WLMQFGGF
Sbjct:    99 DRNRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGF 158

Query:   170 KERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVY 229
             +ERLLADDLF+AK+  ECGVGIFTKTAAEY+RRRENFF ELE+VFADV MAIIADFMLVY
Sbjct:   159 RERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVY 218

Query:   230 LPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVG 289
             LPAPTV+LR   A+ AG ISKFF+NCPDNAFQVALSGTSY+LLQRLGAI RNGAKLFAVG
Sbjct:   219 LPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVG 278

Query:   290 TTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVI 349
             TTSSLVGTA+TNA I ARKAVD++SEGEVE VPI+STSVAYGVYMAVSSNLRYQ++AGVI
Sbjct:   279 TTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVI 338

Query:   350 EQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAH 397
             EQR+LEP+LHQHKL LSA+CFAVRTGNT+LGSLLWVDYARLIGIQK+H
Sbjct:   339 EQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKSH 386

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2063136 AT2G40400 [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 113/291 (38%), Positives = 165/291 (56%)

Query:   112 NREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQ-FGGFK 170
             +R E   V+  A R  ++LP+D+   +  G +   +L  +F+LE+  L   L Q F GF+
Sbjct:   410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query:   171 ERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYL 230
             ERLLAD  FL ++  E  + I T   A+Y++R+ENFF+EL+ V  D V A + DF  V+L
Sbjct:   470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query:   231 PAPTVALRSSFAVHAGPIS-----KFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKL 285
             PAPT++  S      GP S         + PDNAFQ +L G  ++L  R+ ++   G KL
Sbjct:   530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query:   286 FAVGTTSSLVGTAVTNALINARKAVDKS-SEGE-VENVPILSTSVAYGVYMAVSSNLRYQ 343
               VG  SS      +NAL   RK +      GE  +  P+L T++ YG Y+  SSN+RYQ
Sbjct:   590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query:   344 VLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ 394
             ++AG+IE RI + L  Q  L+++ I F VR  N+Y G+  W+D AR  G+Q
Sbjct:   650 IIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

GO:0009507 "chloroplast" evidence=ISM

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2078446 AT3G56140 "AT3G56140" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 2.2e-45, P = 2.2e-45
 Identities = 111/291 (38%), Positives = 165/291 (56%)

Query:   112 NREEALIVLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGLFKWLMQ-FGGFK 170
             +R E   V+  A R  ++LP D+   +  G +   VL   F+LE+  L   L Q F GF+
Sbjct:   419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query:   171 ERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYL 230
             ERLLAD  FL ++  E  + I T   A+Y++R+ENFF+E++ V  D V   + DF  V+L
Sbjct:   479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query:   231 PAPTVALRSSFAVHAGPIS-----KFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKL 285
             PAPT++  S      GP S         + PDNAFQ +L+G  ++L  R+ ++   G KL
Sbjct:   539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query:   286 FAVGTTSSLVGTAVTNALINARKAVDKSS--EGEVENVPILSTSVAYGVYMAVSSNLRYQ 343
               VG  SS      +NAL  ARK +        + +  P+L T++ YG ++  S+NLRYQ
Sbjct:   599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query:   344 VLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ 394
             ++AG+IE R+ + L  Q  L+++AI F VRT N+Y G+  W+D AR  G+Q
Sbjct:   659 IIAGLIEHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

TAIR|locus:2065649 LCD1 "AT2G37860" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 87/283 (30%), Positives = 147/283 (51%)

Query:   119 VLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKS-GLFKWLMQ-FGGFKERLLAD 176
             V+ E +    +LP D+  A K+  I   +L RY +L+ S GL  + ++ +   + R+LAD
Sbjct:   154 VMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLAD 213

Query:   177 DLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVA 236
               FL K+  E  +     T AE  +R ++F+ E E+  AD+++  + +  LV + AP V 
Sbjct:   214 PSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVR 273

Query:   237 LRSSFAVHAGPISK--FFYNC-PDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSS 293
                  A   G + +  F YN  P + F+    G  +S  QRL      G    AVG    
Sbjct:   274 FGQPSA-SPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCG 332

Query:   294 LVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRI 353
             +VG  + N ++ A++ ++KS E  +   P++ ++  +GV+++VSSN RYQ++ G+  +R+
Sbjct:   333 IVGQGIANLIMTAKRNINKSEEN-IPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERV 389

Query:   354 LEPLLHQHKLILSAICFAV--RTGNTYLGSLLWVDYARLIGIQ 394
             +E      K   +A+ F V  R  N   G + +VD+ARL G Q
Sbjct:   390 VEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

GO:0003674 "molecular_function" evidence=ND

GO:0048366 "leaf development" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2158155 RER1 "AT5G22790" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 85/283 (30%), Positives = 143/283 (50%)

Query:   119 VLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEKSGL-FKWLMQFGGF-KERLLAD 176
             V+ E +R   +LP+D+  A K   I    L RY +L+ S     +LM+     + R+LAD
Sbjct:   154 VMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLAD 213

Query:   177 DLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVA 236
               FL KV  E  +     T AE  +R E+F+ E E+  AD+++ ++ D  LV L AP   
Sbjct:   214 PSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYAR 273

Query:   237 LRSSFAVHAGPISKFFYNC---PDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSS 293
             +        G        C   P + F+    G  +S+ QR+      G    +VG    
Sbjct:   274 IGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCG 333

Query:   294 LVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGVIEQRI 353
             L+G  + N ++ A+++V KS E +V   P+  ++  +GV++ +SSN RYQ++ G+  +R+
Sbjct:   334 LIGQGIANLIMTAKRSVKKSEE-DVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERV 390

Query:   354 LEPLLHQHKLILSAICFAV--RTGNTYLGSLLWVDYARLIGIQ 394
             +E      ++ + A+ F V  R  N   G + +VD+A+L G+Q
Sbjct:   391 VEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077828 AT3G08630 "AT3G08630" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 79/236 (33%), Positives = 120/236 (50%)

Query:   168 GFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENF-FKELEIVFADVVMAIIADFM 226
             G++ R+ AD  F  KVL E  VG+      +    R NF   EL+ VF+ +V+  I +F 
Sbjct:   104 GWRSRVAADSQFPFKVLMEMLVGVSANVLGDM-ASRPNFGLNELDFVFSTLVVGSILNFT 162

Query:   227 LVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLF 286
             L+YL AP+     S  +  G     F +CP +   +   G +++L+ R G +   G    
Sbjct:   163 LMYLLAPSAISHGSSNLLPG----IFRSCPSS--HMFEQG-NFTLMNRFGTLVYKGMVFA 215

Query:   287 AVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLA 346
              VG  + LVGTA++N LI  RK +D S E   +  P L  S+ +  +M VS+N+RYQ L 
Sbjct:   216 TVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLN 275

Query:   347 GVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKV 402
             G   + +LE  L    L+      A+R  N  LG + +V  AR+ G Q   E++K+
Sbjct:   276 GA--EFLLEKSLPP--LVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEKKI 327

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2077838 AT3G08640 "AT3G08640" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 77/238 (32%), Positives = 122/238 (51%)

Query:   168 GFKERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENF-FKELEIVFADVVMAIIADFM 226
             G++ R+ AD  F  KVL E  VG+      +    R NF   EL+ VF+ +V+  I +F+
Sbjct:   107 GWRSRVAADPQFPFKVLMEEIVGLSACVLGDM-ASRPNFGLNELDFVFSTLVVGSILNFV 165

Query:   227 LVYLPAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLF 286
             L+Y+ APT A   S     G     F NCP +   +   G S++++ R G +   G    
Sbjct:   166 LMYMLAPTAATLGSSQTLPG----IFRNCPSS--HMFEQG-SFTVMNRFGTLVYKGMVFA 218

Query:   287 AVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLA 346
             +VG  + LVGTA++N LI  RK +D S E   +  P +  S+ +  +M VS+N RYQ L 
Sbjct:   219 SVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLN 278

Query:   347 GV--IEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQKAHEDEKV 402
             G+  +  ++L PL+ +  +I+      +R  N   G + +V  AR+ G Q   E  ++
Sbjct:   279 GIEFLLAKVLPPLVFKTSVIV------LRCANNVAGGMSFVLLARMTGSQSVEEKTEI 330

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2176826 AT5G24690 "AT5G24690" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 55/237 (23%), Positives = 108/237 (45%)

Query:   119 VLAEAKRSMESLPKDLAAAIKDGRIPGAVLSRYFELEK----SGLFKWLMQFG---GFKE 171
             VL E +++M  LP  L  A + G +  A + ++  +      + +    +  G    F  
Sbjct:   180 VLNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAFVG 239

Query:   172 RLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLP 231
             R+LAD  FL K+L E    +      E   R+    +E ++   +V+     +   V+L 
Sbjct:   240 RMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLL 299

Query:   232 APTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTT 291
             AP  +  ++F      +       P+N F+++     + L +R  ++    A+L  +G  
Sbjct:   300 APCRSYGNTFRFD---LQNTLQKLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLA 356

Query:   292 SSLVGTAVTNALINARKAVDKSSEGEVENVPILSTS-VAYGVYMAVSSNLRYQVLAG 347
             +  +  +++N L   +K  ++ S      VP +ST+ + YG ++ + +NLRYQ+L G
Sbjct:   357 AGTLQGSLSNVLAGKKK--NRVSV----TVPSISTNALGYGAFLGIYANLRYQLLCG 407


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      405       329   0.00089  116 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  191 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.73u 0.20s 25.93t   Elapsed:  00:00:02
  Total cpu time:  25.74u 0.20s 25.94t   Elapsed:  00:00:02
  Start:  Sat May 11 05:37:20 2013   End:  Sat May 11 05:37:22 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
pfam11891	179	pfam11891, DUF3411, Domain of unknown function (DU	8e-78
PLN03138	796	PLN03138, PLN03138, Protein TOC75; Provisional	2e-05
pfam12810	248	pfam12810, Gly_rich, Glycine rich protein	0.002

>gnl|CDD|221294 pfam11891, DUF3411, Domain of unknown function (DUF3411)

 Score =  238 bits (608), Expect = 8e-78
 Identities = 84/178 (47%), Positives = 117/178 (65%)

Query: 171 ERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYL 230
           ERLLAD  FL K+  E  + I   T AE ++R ENF+ E ++V AD+++  + +F LVYL
Sbjct: 1   ERLLADPSFLFKLAMEEVIDICAATVAEVEKRGENFWAEFDLVAADLLVGSVVNFALVYL 60

Query: 231 PAPTVALRSSFAVHAGPISKFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGT 290
            APT +  S+ A  AG + KF  + P N F+  L G SYSL QR G +   GAKL AVG 
Sbjct: 61  LAPTRSFGSTAAEMAGGLRKFLGSLPSNVFEKGLPGRSYSLQQRFGTVFYKGAKLAAVGF 120

Query: 291 TSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVAYGVYMAVSSNLRYQVLAGV 348
            + LVG A++NAL+ ARKAVDK+SE  V+  P+  T++ +G ++ VS+NLRYQ+L G+
Sbjct: 121 IAGLVGQAISNALMAARKAVDKNSEESVKVPPLFKTALLWGAFLGVSANLRYQLLNGL 178

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif. Length = 179

>gnl|CDD|215598 PLN03138, PLN03138, Protein TOC75; Provisional

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 13/109 (11%)

Query: 2   SIASCFFASASLSTISN-------NNTPELNLNRPSPLPLRLSVTSPPSSSSFTTPLSLH 54
           S ++   A+AS S  S+       ++    +  R           S  +SSS T+  +  
Sbjct: 3   SSSTMVSAAASTSLSSSRPQLSSFSSRSPQSATRSPRASSIKCSASASASSSATSSSASL 62

Query: 55  LHHHRRPPTSLFLAFSTPTSSGGGGGDDNYNNNGGSGGGGGGNNNDGDG 103
           + +            S    SGGGGG        G GGGGGG    G  
Sbjct: 63  VANGAVA------LLSASAISGGGGGGGGGFGGFGGGGGGGGGGGGGWR 105

Length = 796

>gnl|CDD|221784 pfam12810, Gly_rich, Glycine rich protein

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 76  GGGGGDDNYNNNGGSGGGGGGNNNDGDG 103
           GGGG  +    +GG GGG  G     +G
Sbjct: 113 GGGGSGNYNGGSGGFGGGLVGGGGTSNG 140

This family of proteins is greatly expanded in Trichomonas vaginalis. The proteins are composed of several glycine rich motifs interspersed through the sequence. Although many proteins have been annotated by similarity in the family these annotations given the biased composition of the sequences these are unlikely to be functionally relevant. Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
PF11891	180	DUF3411: Domain of unknown function (DUF3411); Int	100.0
COG4907	595	Predicted membrane protein [Function unknown]	88.1
COG4907	595	Predicted membrane protein [Function unknown]	85.86
KOG3915	641	consensus Transcription regulator dachshund, conta	80.1

>PF11891 DUF3411: Domain of unknown function (DUF3411); InterPro: IPR021825 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=3.2e-75  Score=533.73  Aligned_cols=178  Identities=51%  Similarity=0.746  Sum_probs=174.5

Q ss_pred             hhhhcchhhHHHHHHHHhhhhhhhhhhhhhccCcchHhHHHHHHHHHHHHHHHHHhhhhccccccccccccccccC-chh
Q 015503          171 ERLLADDLFLAKVLFECGVGIFTKTAAEYDRRRENFFKELEIVFADVVMAIIADFMLVYLPAPTVALRSSFAVHAG-PIS  249 (405)
Q Consensus       171 ~RlLADP~FlfKl~iE~~I~i~~~~~aE~~~Rge~F~~ElDfV~sdvv~g~i~nfaLV~LLAPt~s~g~~~a~~aG-~l~  249 (405)
                      |||||||+|||||++||+||++|+++|||++|||+||+|||||+||+++++|+||+||||||||++++++++...| .++
T Consensus         1 ~RllADP~Fl~Kl~~E~~i~i~~~~~~e~~~R~e~f~~E~d~v~~d~v~~~i~n~~lv~llAPt~s~~~~~~~~~~~~~~   80 (180)
T PF11891_consen    1 ERLLADPSFLFKLAIEEVIGIGCATAAEYAKRGERFWNELDFVFSDVVVGSIVNFALVWLLAPTRSFGSPAASSPGGGLQ   80 (180)
T ss_pred             CcccccchHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHhccchHhhCcccccccchHHH
Confidence            7999999999999999999999999999999999999999999999999999999999999999999998876555 899


Q ss_pred             hHhhcCCchhhhcccCCCCcchhhhHHHHhhcchhhhhhhhhHhhHHHHHHHHHHHHhhhcCCCCCCCcCCCCccchhhh
Q 015503          250 KFFYNCPDNAFQVALSGTSYSLLQRLGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAVDKSSEGEVENVPILSTSVA  329 (405)
Q Consensus       250 k~~~~lP~n~Fq~~~pg~~fsl~qR~~a~v~KGa~l~~VGf~aGlvG~glsN~L~~~RK~~d~s~e~~~~~pPvl~tal~  329 (405)
                      |++++||+|+||+++|+++||++||++||+|||++|++|||+||++||++||+|+++||++||+||+++++||+++||++
T Consensus        81 ~~~~~~P~n~Fq~~~~g~~fsl~qR~~~~~~kg~~l~~VG~~ag~vg~~lsn~L~~~rk~~~~~~e~~~~~ppv~~ta~~  160 (180)
T PF11891_consen   81 KFLGSLPNNAFQKGYPGRSFSLAQRIGAFVYKGAKLAAVGFIAGLVGTGLSNALIAARKKVDPSFEPSVPVPPVLKTALG  160 (180)
T ss_pred             HHHHhChHHHhccCCCCCcccHHHHHHHHHHcchHhhhhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHhhcchhhhHHHHHhH
Q 015503          330 YGVYMAVSSNLRYQVLAGV  348 (405)
Q Consensus       330 wG~fMGvSSNlRYQilnGl  348 (405)
                      ||+|||+|||+|||+|||+
T Consensus       161 ~g~fmGvSsNlRYQil~Gi  179 (180)
T PF11891_consen  161 WGAFMGVSSNLRYQILNGI  179 (180)
T ss_pred             HHHHHhhhHhHHHHHHcCC
Confidence            9999999999999999998

This domain is found in eukaryotes. This domain is typically between 168 to 186 amino acids in length. This domain has a conserved RYQ sequence motif.

>COG4907 Predicted membrane protein [Function unknown]

Probab=88.10  E-value=0.36  Score=51.69  Aligned_cols=7  Identities=0%  Similarity=0.140  Sum_probs=2.5

Q ss_pred             cccCCCC
Q 015503           71 TPTSSGG   77 (405)
Q Consensus        71 ~~~~~~~   77 (405)
                      ||.+++|
T Consensus       568 a~S~~~~  574 (595)
T COG4907         568 ASSRRSS  574 (595)
T ss_pred             cccccCC
Confidence            3333333

>COG4907 Predicted membrane protein [Function unknown]

Probab=85.86  E-value=0.56  Score=50.32  Aligned_cols=7  Identities=86%  Similarity=1.483  Sum_probs=2.7

Q ss_pred             CCCCCCC
Q 015503           74 SSGGGGG   80 (405)
Q Consensus        74 ~~~~~~~   80 (405)
                      |++|||+
T Consensus       574 ~~~GGG~  580 (595)
T COG4907         574 SSSGGGG  580 (595)
T ss_pred             CCCCCCC
Confidence            3444333

>KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription]

Probab=80.10  E-value=1.7  Score=46.75  Aligned_cols=9  Identities=78%  Similarity=1.453  Sum_probs=3.5

Q ss_pred             cCCCCCCCC
Q 015503           73 TSSGGGGGD   81 (405)
Q Consensus        73 ~~~~~~~~~   81 (405)
                      |+.|||+++
T Consensus        61 ~~~~~g~~g   69 (641)
T KOG3915|consen   61 TSTGGGGGG   69 (641)
T ss_pred             ecccCCCCC
Confidence            333433333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00