Citrus Sinensis ID: 015579
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 404 | ||||||
| 255580495 | 408 | conserved hypothetical protein [Ricinus | 0.952 | 0.943 | 0.632 | 1e-135 | |
| 356558985 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.829 | 0.863 | 0.631 | 1e-118 | |
| 449464112 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.938 | 0.976 | 0.571 | 1e-116 | |
| 356504408 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.846 | 0.870 | 0.610 | 1e-115 | |
| 225467702 | 380 | PREDICTED: uncharacterized protein LOC10 | 0.801 | 0.852 | 0.629 | 1e-115 | |
| 224069880 | 275 | predicted protein [Populus trichocarpa] | 0.655 | 0.963 | 0.756 | 1e-112 | |
| 357513325 | 372 | hypothetical protein MTR_8g012420 [Medic | 0.841 | 0.913 | 0.588 | 1e-110 | |
| 297833518 | 371 | hypothetical protein ARALYDRAFT_896892 [ | 0.801 | 0.873 | 0.577 | 1e-107 | |
| 356566244 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.831 | 0.951 | 0.533 | 1e-105 | |
| 18397912 | 368 | uncharacterized protein [Arabidopsis tha | 0.873 | 0.959 | 0.545 | 1e-104 |
| >gi|255580495|ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis] gi|223529318|gb|EEF31286.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/427 (63%), Positives = 318/427 (74%), Gaps = 42/427 (9%)
Query: 1 MDHSLSLHGPAKTLP---FLPPS-KPRGPRSLPPSNS--NFG------------RRRLLR 42
MD+SLS ++T+P FLP S K S+ P N NF RR++LR
Sbjct: 1 MDYSLS----SQTIPCPHFLPSSVKSISLPSILPYNFTLNFSCRRQTNQTTFLHRRKVLR 56
Query: 43 SGVVVQARAGPSPCEFSSSP-----LNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELK 97
+ + V ARAG S CE SSS LNTPLEP+S AGKFLS V QNQRQ F++AV+DELK
Sbjct: 57 APLSVVARAGSSHCEPSSSSSSSFSLNTPLEPSSAAGKFLSSVFQNQRQLFHVAVADELK 116
Query: 98 LLANDRDAAVARMSLSSGSDEGPLHRVVSGSAHGADSCFCWIAQLKEHECQTAVEDVMYM 157
LLA+ RD AV+RM LSS SDE LHR IAQLKEHECQ AVEDVMYM
Sbjct: 117 LLADARDDAVSRMFLSSRSDEASLHR--------------RIAQLKEHECQIAVEDVMYM 162
Query: 158 LILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRA 217
LI KFSEIRV LVPKLSRCIYNGRLEI PSKDWELESIH FEVLEMI+EH+ TVIGLRA
Sbjct: 163 LIFSKFSEIRVPLVPKLSRCIYNGRLEIGPSKDWELESIHSFEVLEMIKEHVCTVIGLRA 222
Query: 218 NCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSL 277
N SVTDSWATTEIQRL+LGRVY AS+LYGYFLKSASLR+YLE+C+A +H ++HL+ R
Sbjct: 223 NSSVTDSWATTEIQRLQLGRVYAASVLYGYFLKSASLRHYLEQCIAVSHHNVHLSCRTVR 282
Query: 278 QFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLR 337
Q+PE+ S+GL N V ++N QS S G+G+ + ++ L+CYVMGFD ETLQRCAKL+
Sbjct: 283 QYPESISHGLT-NIVFRRISNMQSGSAGQGSIKQDWQRGKLRCYVMGFDAETLQRCAKLK 341
Query: 338 SREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADA 397
S+EA+NL+EKHS ALFG+ TG L+ DEVILTSFSSLKRLVLEA+AFGSFLWD EEY ++
Sbjct: 342 SKEAMNLIEKHSSALFGNDNTGSLENDEVILTSFSSLKRLVLEAVAFGSFLWDTEEYVNS 401
Query: 398 VYKLKEN 404
++KL EN
Sbjct: 402 IFKLSEN 408
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558985|ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449464112|ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356504408|ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max] | Back alignment and taxonomy information |
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| >gi|225467702|ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224069880|ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|357513325|ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula] gi|355520973|gb|AET01427.1| hypothetical protein MTR_8g012420 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297833518|ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356566244|ref|XP_003551344.1| PREDICTED: uncharacterized protein LOC100794032 [Glycine max] | Back alignment and taxonomy information |
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| >gi|18397912|ref|NP_566302.1| uncharacterized protein [Arabidopsis thaliana] gi|6041833|gb|AAF02142.1|AC009853_2 unknown protein [Arabidopsis thaliana] gi|6642634|gb|AAF20215.1|AC012395_2 unknown protein [Arabidopsis thaliana] gi|14596187|gb|AAK68821.1| Unknown protein [Arabidopsis thaliana] gi|21593217|gb|AAM65166.1| unknown [Arabidopsis thaliana] gi|22136074|gb|AAM91115.1| unknown protein [Arabidopsis thaliana] gi|332641006|gb|AEE74527.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 404 | ||||||
| TAIR|locus:2079626 | 368 | AT3G07310 "AT3G07310" [Arabido | 0.517 | 0.567 | 0.647 | 3.3e-96 | |
| TAIR|locus:2152516 | 344 | AT5G48590 "AT5G48590" [Arabido | 0.477 | 0.561 | 0.615 | 2.2e-84 | |
| TAIR|locus:2198055 | 423 | AT1G48450 "AT1G48450" [Arabido | 0.772 | 0.737 | 0.384 | 6e-48 | |
| TAIR|locus:2088490 | 427 | AT3G17800 "AT3G17800" [Arabido | 0.658 | 0.622 | 0.396 | 1.9e-44 | |
| TAIR|locus:2031760 | 406 | AT1G32160 "AT1G32160" [Arabido | 0.631 | 0.628 | 0.336 | 4.6e-40 |
| TAIR|locus:2079626 AT3G07310 "AT3G07310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 689 (247.6 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 145/224 (64%), Positives = 169/224 (75%)
Query: 43 SGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLAND 102
S +VV A AG S CE SS LN PLEP S G+FL VL N+RQ F+ A +DELK LA+D
Sbjct: 40 SSMVVVAAAGQSRCEPGSS-LNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADD 98
Query: 103 RDAAVARMSLSSGSDEGPLHRVVSGSAHGADSCFCWIAQLKEHECQTAVEDVMYMLILYK 162
R+AA+ARMSLSSGSDE LHR IA+LKE C+TAV+D+MYMLI YK
Sbjct: 99 REAALARMSLSSGSDEASLHRR--------------IAELKERYCKTAVQDIMYMLIFYK 144
Query: 163 FSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVT 222
+SEIRV LVPKLSRCIYNGRLEIWPSKDWELESI+ + LE+I+EH+S VIGLR N VT
Sbjct: 145 YSEIRVPLVPKLSRCIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVT 204
Query: 223 DSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH 266
D+WATT+IQ+L L +VY ASILYGYFLKSASLR+ LE L+ H
Sbjct: 205 DNWATTQIQKLHLRKVYAASILYGYFLKSASLRHQLECSLSDIH 248
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| TAIR|locus:2152516 AT5G48590 "AT5G48590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2198055 AT1G48450 "AT1G48450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088490 AT3G17800 "AT3G17800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031760 AT1G32160 "AT1G32160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00002530 | hypothetical protein (275 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 404 | |||
| pfam05542 | 85 | pfam05542, DUF760, Protein of unknown function (DU | 6e-15 |
| >gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760) | Back alignment and domain information |
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Score = 69.1 bits (170), Expect = 6e-15
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 192 ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 251
L EVLE +R ++S ++G T + R L ++ +S++ GYFL++
Sbjct: 17 RLADSASPEVLEAMRRNVSGLLGSL---PSDHFEVTIQTSRENLAQLLASSMMTGYFLRN 73
Query: 252 ASLRYYLEECL 262
A R LE L
Sbjct: 74 AEQRLELERSL 84
|
This family contains several uncharacterized plant proteins. Length = 85 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 404 | |||
| PF05542 | 86 | DUF760: Protein of unknown function (DUF760); Inte | 99.92 | |
| PF05542 | 86 | DUF760: Protein of unknown function (DUF760); Inte | 97.57 |
| >PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins | Back alignment and domain information |
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Probab=99.92 E-value=2.2e-25 Score=182.51 Aligned_cols=65 Identities=31% Similarity=0.452 Sum_probs=62.3
Q ss_pred cCchHHHHHHHHHHHHhhccc-cCCCCCCCcceEEechhhhhhHHHHHhhhhHhhhhhhhHhHHHHHHh
Q 015579 196 IHEFEVLEMIREHISTVIGLR-ANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA 263 (404)
Q Consensus 196 ihS~Ev~EmI~~hl~~vLG~~-~~~~~~~~~~~v~isr~~Lg~vYAASmMyGYFLr~aeqR~qLE~sl~ 263 (404)
+|||||+|+|++||.+|||++ |++.|+ ++++++|++||+||+++||||||||++|+|++||++|+
T Consensus 21 ~~s~ev~e~m~~~v~~llG~l~p~~~~~---~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~ 86 (86)
T PF05542_consen 21 PASPEVLEAMKQHVSGLLGNLSPSDQFN---VTIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK 86 (86)
T ss_pred cCCHHHHHHHHHHHHHHHcCCCCcccCc---ceeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 899999999999999999999 887665 89999999999999999999999999999999999985
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| >PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00