Citrus Sinensis ID: 015801
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | ||||||
| 225457753 | 483 | PREDICTED: transmembrane protein 184C [V | 0.992 | 0.821 | 0.839 | 0.0 | |
| 224082402 | 484 | predicted protein [Populus trichocarpa] | 0.997 | 0.824 | 0.838 | 0.0 | |
| 255570390 | 484 | conserved hypothetical protein [Ricinus | 0.997 | 0.824 | 0.840 | 0.0 | |
| 449462168 | 485 | PREDICTED: transmembrane protein 184C-li | 0.992 | 0.818 | 0.819 | 0.0 | |
| 224066743 | 479 | predicted protein [Populus trichocarpa] | 0.98 | 0.818 | 0.834 | 0.0 | |
| 356518603 | 485 | PREDICTED: transmembrane protein 184C-li | 0.995 | 0.820 | 0.812 | 0.0 | |
| 297839581 | 484 | hypothetical protein ARALYDRAFT_895607 [ | 0.982 | 0.811 | 0.820 | 0.0 | |
| 18411404 | 484 | uncharacterized protein [Arabidopsis tha | 0.982 | 0.811 | 0.805 | 0.0 | |
| 147774899 | 479 | hypothetical protein VITISV_035027 [Viti | 0.99 | 0.826 | 0.745 | 0.0 | |
| 356546607 | 484 | PREDICTED: transmembrane protein 184C-li | 0.987 | 0.816 | 0.783 | 0.0 |
| >gi|225457753|ref|XP_002278084.1| PREDICTED: transmembrane protein 184C [Vitis vinifera] gi|302142772|emb|CBI19975.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/398 (83%), Positives = 373/398 (93%), Gaps = 1/398 (0%)
Query: 1 MVPVYALESFLSLLNSDAAFNCEVIRDCYEAFALYCFERYLIACLGGEERTIEFMESQTI 60
MVPVYALESFLSLL+S+AAFNC++IRDCYEAFALYCFERYLIACLGGE+ T+EFMESQ +
Sbjct: 83 MVPVYALESFLSLLDSNAAFNCQIIRDCYEAFALYCFERYLIACLGGEKSTVEFMESQRL 142
Query: 61 ISTSSPLLEESYTFGVVEHPCPLNCILRDWRLGPEFYNAVKIGIVQYMILKMICALLAMI 120
I S+PLLEE+YT+G+VEHP PLN LR+W LG +FY AVK+GIVQYMILKMICALLA+
Sbjct: 143 IDCSTPLLEEAYTYGIVEHPFPLNFFLREWYLGRDFYQAVKVGIVQYMILKMICALLAIF 202
Query: 121 LQTFGVYGEGKFEWKYGYPYLAVVLNFSQTWALYCLVQFYSVTKDKLEPIKPLAKFLTFK 180
L+ GVYGEGKFEW+YGYPYLAVVLNFSQTWALYCLVQFY+VTKDKLEPIKPLAKFL FK
Sbjct: 203 LEFLGVYGEGKFEWRYGYPYLAVVLNFSQTWALYCLVQFYTVTKDKLEPIKPLAKFLVFK 262
Query: 181 SIVFLTWWQGIIVAFLFSIGAFRGSLAQELKTRIQDYIICIEMGIAAVVHLYVFPARPYK 240
SIVFLTWWQG+ VAFLFSIGAF+GSLAQELKTRIQDYIICIEMG+AAVVHLYVFPA PY+
Sbjct: 263 SIVFLTWWQGVAVAFLFSIGAFKGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYQ 322
Query: 241 RGERCVRNVAVMTDYASLGTPPDPEEVKDSERTTKMRIARHDEREKRLNFPQSVRDVVLG 300
RGERCVRNVAVM DYASL TPPDPEEV+D ER+T++R+ARHDEREKRLNFPQSVRDVVLG
Sbjct: 323 RGERCVRNVAVMADYASLDTPPDPEEVRDCERSTRIRLARHDEREKRLNFPQSVRDVVLG 382
Query: 301 SGEIIVDDMKYTVSHVVEPVERGIAKINKTFHQISENVKRHEKERKRSSKDDSYLIPLNS 360
SGEIIVDDMK+TVSHVVEPVERGIAKINKTFHQISENVKRHE ERKR++KDDSY+IPLNS
Sbjct: 383 SGEIIVDDMKFTVSHVVEPVERGIAKINKTFHQISENVKRHE-ERKRNAKDDSYVIPLNS 441
Query: 361 WTREFSEVQDHIPEGSFSDSSISNGKRQHYQSKASRTK 398
WTREFSEV D++ EGS SDS +S+GKRQHYQ+KA+ ++
Sbjct: 442 WTREFSEVHDNLVEGSISDSGLSSGKRQHYQTKATASR 479
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224082402|ref|XP_002306680.1| predicted protein [Populus trichocarpa] gi|222856129|gb|EEE93676.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255570390|ref|XP_002526154.1| conserved hypothetical protein [Ricinus communis] gi|223534531|gb|EEF36230.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449462168|ref|XP_004148813.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus] gi|449518376|ref|XP_004166218.1| PREDICTED: transmembrane protein 184C-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224066743|ref|XP_002302193.1| predicted protein [Populus trichocarpa] gi|222843919|gb|EEE81466.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356518603|ref|XP_003527968.1| PREDICTED: transmembrane protein 184C-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297839581|ref|XP_002887672.1| hypothetical protein ARALYDRAFT_895607 [Arabidopsis lyrata subsp. lyrata] gi|297333513|gb|EFH63931.1| hypothetical protein ARALYDRAFT_895607 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|18411404|ref|NP_565152.1| uncharacterized protein [Arabidopsis thaliana] gi|14334724|gb|AAK59540.1| unknown protein [Arabidopsis thaliana] gi|21280885|gb|AAM44904.1| unknown protein [Arabidopsis thaliana] gi|332197830|gb|AEE35951.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|147774899|emb|CAN77212.1| hypothetical protein VITISV_035027 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356546607|ref|XP_003541716.1| PREDICTED: transmembrane protein 184C-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | ||||||
| TAIR|locus:2196005 | 484 | AT1G77220 "AT1G77220" [Arabido | 0.982 | 0.811 | 0.792 | 3.4e-171 | |
| TAIR|locus:2121763 | 485 | LAZ1 "AT4G38360" [Arabidopsis | 0.995 | 0.820 | 0.529 | 6.6e-113 | |
| TAIR|locus:2201235 | 403 | AT1G23070 "AT1G23070" [Arabido | 0.79 | 0.784 | 0.439 | 3.7e-71 | |
| DICTYBASE|DDB_G0279555 | 351 | tmem184C "transmembrane protei | 0.432 | 0.492 | 0.361 | 1.5e-37 | |
| UNIPROTKB|Q5ZMP3 | 445 | TMEM184C "Transmembrane protei | 0.757 | 0.680 | 0.296 | 4.9e-37 | |
| UNIPROTKB|Q9NVA4 | 438 | TMEM184C "Transmembrane protei | 0.645 | 0.589 | 0.309 | 2.7e-36 | |
| UNIPROTKB|A5D9H3 | 470 | TMEM34 "Transmembrane protein | 0.64 | 0.544 | 0.308 | 1.2e-35 | |
| UNIPROTKB|Q17QL9 | 438 | TMEM184C "Transmembrane protei | 0.64 | 0.584 | 0.308 | 1.2e-35 | |
| RGD|727852 | 503 | Tmem184c "transmembrane protei | 0.645 | 0.512 | 0.316 | 1.2e-35 | |
| MGI|MGI:2384562 | 525 | Tmem184c "transmembrane protei | 0.645 | 0.491 | 0.316 | 4e-35 |
| TAIR|locus:2196005 AT1G77220 "AT1G77220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1664 (590.8 bits), Expect = 3.4e-171, P = 3.4e-171
Identities = 314/396 (79%), Positives = 351/396 (88%)
Query: 1 MVPVYALESFLSLLNSDAAFNCEVIRDCYEAFALYCFERYLIACLGGEERTIEFMESQTI 60
MVPVYA+ESFLSL+NS+AAFNCEVIRDCYEAFALYCFERYLIACL GEERTIEFME QT+
Sbjct: 83 MVPVYAVESFLSLVNSEAAFNCEVIRDCYEAFALYCFERYLIACLDGEERTIEFMEQQTV 142
Query: 61 ISTSSPLLEESYTFGVVEHPCPLNCILRDWRLGPEFYNAVKIGIVQYMILKMICALLAMI 120
I+ S+PLLE + ++GVVEHP P+NC ++DW LGP+FY+AVKIGIVQYMILKMICALLAMI
Sbjct: 143 ITQSTPLLEGTCSYGVVEHPFPMNCFVKDWSLGPQFYHAVKIGIVQYMILKMICALLAMI 202
Query: 121 LQTFGVYGEGKFEWKYGYPYLAVVLNFSQTWALYCLVQFYSVTKDKLEPIKPLAKFLTFK 180
L+ FGVYGEGKF W YGYPYLAVVLNFSQTWALYCLVQFY+V KDKL PIKPLAKFLTFK
Sbjct: 203 LEAFGVYGEGKFAWNYGYPYLAVVLNFSQTWALYCLVQFYNVIKDKLAPIKPLAKFLTFK 262
Query: 181 SIVFLTWWQGIIVAFLFSIGAFRGSLAQELKTRIQDYIICIEMGIAAVVHLYVFPARPYK 240
SIVFLTWWQGIIVAFLFS+G +GSLA+ELKTRIQDYIICIEMGIAAVVHLYVFPA PYK
Sbjct: 263 SIVFLTWWQGIIVAFLFSMGLVKGSLAKELKTRIQDYIICIEMGIAAVVHLYVFPAAPYK 322
Query: 241 RGERCVRNVAVMTDYASLGTPPDPEEVKDSERTTKMRIARHDEREKRLNFPQSVRDVVLG 300
RGERCVRNVAVM+DYAS+ PPDPEEVKDSERTT+ R RHD+REKRLNFPQSVRDVVLG
Sbjct: 323 RGERCVRNVAVMSDYASIDVPPDPEEVKDSERTTRTRYGRHDDREKRLNFPQSVRDVVLG 382
Query: 301 SGEIIVDDMKYTVSHVVEPVERGIAKINKTFHQISENVXXXXXXXXXXXXDDSYLIPLNS 360
SGEIIVDDM++TVSHVVEPVERGIAKIN+TFHQISENV DDSY+IPLN
Sbjct: 383 SGEIIVDDMRFTVSHVVEPVERGIAKINRTFHQISENVKRFEQQKKTTK-DDSYVIPLNQ 441
Query: 361 WTREFSEVQDHIPEG-SFSDSSISNGKRQHYQSKAS 395
W +EFS+V +++ +G S SDS + + R H+QS+ S
Sbjct: 442 WAKEFSDVHENLYDGGSVSDSGLGSTNR-HHQSRVS 476
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| TAIR|locus:2121763 LAZ1 "AT4G38360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2201235 AT1G23070 "AT1G23070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0279555 tmem184C "transmembrane protein 184C" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZMP3 TMEM184C "Transmembrane protein 184C" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NVA4 TMEM184C "Transmembrane protein 184C" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A5D9H3 TMEM34 "Transmembrane protein 34" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q17QL9 TMEM184C "Transmembrane protein 184C" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|727852 Tmem184c "transmembrane protein 184C" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:2384562 Tmem184c "transmembrane protein 184C" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 400 | |||
| pfam03619 | 272 | pfam03619, Solute_trans_a, Organic solute transpor | 1e-112 |
| >gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha | Back alignment and domain information |
|---|
Score = 329 bits (847), Expect = e-112
Identities = 114/242 (47%), Positives = 150/242 (61%), Gaps = 17/242 (7%)
Query: 1 MVPVYALESFLSLLNSDAAFNCEVIRDCYEAFALYCFERYLIACLGGEERTIEFMESQTI 60
MVP+YA+ SFLSLL AA ++IRDCYEAF +Y F LIA LGGE I +E +
Sbjct: 45 MVPIYAVISFLSLLFPKAAIYFDLIRDCYEAFVIYTFFSLLIAYLGGERNIIRLLEGKPP 104
Query: 61 ISTSSPLLEESYTFGVVEHPCPLNCILRDWRLGPEFYNAVKIGIVQYMILKMICALLAMI 120
I PLL C+LR R P F+ K G++QY+++K +CA+LA+I
Sbjct: 105 IRHPFPLLT--------------KCLLRTDRSDPTFFLRCKRGVLQYVVVKPLCAILAII 150
Query: 121 LQTFGVYGEGKFEWKYGYPYLAVVLNFSQTWALYCLVQFYSVTKDKLEPIKPLAKFLTFK 180
LQ FGVYGEG F GY YL ++ N S + ALYCLV FY KD+L P KPL KFL K
Sbjct: 151 LQAFGVYGEGSFSPDSGYLYLTIIYNISVSLALYCLVLFYKALKDELAPFKPLLKFLCIK 210
Query: 181 SIVFLTWWQGIIVAFLFSIGAFRGSLAQ---ELKTRIQDYIICIEMGIAAVVHLYVFPAR 237
I+F ++WQG++++ L S+G + + A EL IQ+++ICIEM I A+ HLY FP +
Sbjct: 211 LIIFFSFWQGVLISILVSLGLIKPTEAWEEPELSAGIQNFLICIEMFIFAIAHLYAFPYK 270
Query: 238 PY 239
PY
Sbjct: 271 PY 272
|
This family is a transmembrane organic solute transport protein. In vertebrates these proteins form a complex with Ostbeta, and function as bile transporters. In plants they may transport brassinosteroid-like compounds and act as regulators of cell death. Length = 272 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| KOG2641 | 386 | consensus Predicted seven transmembrane receptor - | 100.0 | |
| PF03619 | 274 | Solute_trans_a: Organic solute transporter Ostalph | 100.0 |
| >KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=524.50 Aligned_cols=275 Identities=40% Similarity=0.686 Sum_probs=247.0
Q ss_pred CcchhhHHhHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHhhhccccCCCchhhhhccCCccccC
Q 015801 1 MVPVYALESFLSLLNSDAAFNCEVIRDCYEAFALYCFERYLIACLGGEERTIEFMESQTIISTSSPLLEESYTFGVVEHP 80 (400)
Q Consensus 1 MVPIYAi~S~lSL~~P~~aiy~d~iRdcYEAfvIYsFf~LLi~yLGGe~~~i~~L~~~~~~~~~~p~l~~~~~~~~~~h~ 80 (400)
|+||||+.||+||+.|++++|++++||||||||||+|++||++|+|||++++..++++. .+.+|+
T Consensus 77 mvPIys~~S~vsl~~p~~~~~~~~vr~~Yeaf~ly~F~sLl~~ylGGe~~~v~~l~~~~---------------~~~~~~ 141 (386)
T KOG2641|consen 77 MVPIYSVASFVSLLVPRVAFYLDTVRECYEAFVLYVFLSLLFHYLGGEQNIVTELEGRL---------------IRVNHT 141 (386)
T ss_pred hhHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHhccC---------------CcccCC
Confidence 89999999999999999999999999999999999999999999999999999887632 125789
Q ss_pred ccccccccccc-CChhHHHHHHhhhhhhhhHHHHHHHHHHHHHHhccccCCccccccchhhHHHHHHHHHHHHHHHHHHH
Q 015801 81 CPLNCILRDWR-LGPEFYNAVKIGIVQYMILKMICALLAMILQTFGVYGEGKFEWKYGYPYLAVVLNFSQTWALYCLVQF 159 (400)
Q Consensus 81 ~P~~ccl~p~~-lg~~fl~~cK~gVLQYvIvKPl~ailaiIle~~GvY~eg~~s~~~aylyl~iI~niS~~lALY~Lv~F 159 (400)
+|+|||+||+. +++.++++||+||+||+|+||++++++++++++|.|++|++++ |+|+++++|+|+++|||||.+|
T Consensus 142 ~P~cc~~~p~~~~~~~~lr~~K~~vlQ~~ivkp~~~lv~lvl~~~g~y~~g~~~~---~~~~~~i~n~S~~lalY~L~~f 218 (386)
T KOG2641|consen 142 PPFCCFFPPTVRLTPKFLRRCKQGVLQYPIVKPFLALVTLVLYAFGVYDDGDFSV---YLYLTIIYNCSVSLALYSLVLF 218 (386)
T ss_pred CCceeccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCccc---eehhHHHHHHHHHHHHHHHHHH
Confidence 99998888775 8999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred HHHhhhhcCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCCc---HHHHHHHhhhhHHHHHHHHHHHHHhhcccC
Q 015801 160 YSVTKDKLEPIKPLAKFLTFKSIVFLTWWQGIIVAFLFSIGAFRGSL---AQELKTRIQDYIICIEMGIAAVVHLYVFPA 236 (400)
Q Consensus 160 Y~atke~L~p~kPl~KFl~IK~VVFltfwQ~viIaiL~~~Gvi~~~~---~~~i~~~iqd~LICiEM~i~AIlh~~aFp~ 236 (400)
|++++++|.|++|++||+|+|+|||++||||+++++|...|.+++.. .+..+.++||++||+||+++|++|+||||+
T Consensus 219 y~~~~~~L~py~p~~KF~~vk~ivf~~~wQg~vi~~l~~~g~~~~~~~~~~~~~~~~iQnfiiciEM~i~ai~~~~af~~ 298 (386)
T KOG2641|consen 219 YTVTKDELSPYQPVVKFLCVKLIVFLSFWQGIVLAILVKLGKIGPSYFDEVGTVAYGIQNFLICIEMLIAAIAHFYAFPA 298 (386)
T ss_pred HHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHhhhhHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999998543 357899999999999999999999999999
Q ss_pred ccccCC-CccccceeeeeecccCCCCCCccccccccccccccccccCccccc--ccCCcccceeEec
Q 015801 237 RPYKRG-ERCVRNVAVMTDYASLGTPPDPEEVKDSERTTKMRIARHDEREKR--LNFPQSVRDVVLG 300 (400)
Q Consensus 237 kpY~~~-~~~~~~~~~~~d~~~~~~~~d~~ev~~~~~~~~~~~~~~~~~~~~--~~~~~s~~d~~~~ 300 (400)
+||... ++.. |+.+.|.....+.++++.+|+.........-+++ ...++|.||+..+
T Consensus 299 ~~ya~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 358 (386)
T KOG2641|consen 299 APYALFDERSC-------DYRSVDMFSISSSLWDSLMPNDLCSDAIRNFSPTYQDYTPQSDQDALSA 358 (386)
T ss_pred chhcccccccc-------ccccccccccchHHHHhhcccCcccccccCCCcccccccccccCccccC
Confidence 999883 3321 6667777777788888888887776643333333 8889999998876
|
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| >PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00