Citrus Sinensis ID: 016183

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MSDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKKGDKAEESTEAEPMDATNGAATQE
cccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccEEEEcccccccEEEEEEccEEEEccccccccccccEEccccEEEEEEEEEccccccEEcccccEEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccEEEccccEEEEEEEEEEEcccccEEEccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccc
ccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEccEEEccccccccccEcccccEEEEEEEEEEccEEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccEEEEccccccccEEEEEcccEEEEccccccccccEEEEcccEEEEEEEEEccccEEEEcccccEEEEEccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccEcccccEEEEEEEEEEEcccccEEEccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccc
msddereekeldltspevVTKYKSAAEIANKALQLVVSeckpgvkivdLCEKGDSFIREQTGNMYKNVKKKIErgvafpscvsvnntlchfsplasdetvlqEGDMIKIDLGCHIDGFIAVVAHThvlqdgpvtgRAADVIAAANTAAEVALRLvrpgkknkdVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVlsvsnpdtrvddaefeeneVYAVDIVtstgdgkpklldekQTTIYKRAVdknyhlkmkASRFIFSeinqkfpimpfTARALEEKRARLGLVEcvnhellqpypvlhekpgdyvAHIKFTVLlmpngsdritshtlqeiqstktiddpEIKAWLALGIKtkkkgggkkkkgkkgdkaeesteaepmdatngaatqe
msddereekeldltspevvtKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGdsfireqtgnmykNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVAlrlvrpgkknkDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDtrvddaefeenevyavdivtstgdgkpklldekqttiykravdknyhlKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTlqeiqstktiddpeiKAWLALgiktkkkgggkkkkgkkgdkaeesteaepmdatngaatqe
MSDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRaadviaaantaaevaLRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALgiktkkkgggkkkkgkkgdkAEESTEAEPMDATNGAATQE
******************VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALGI**************************************
************LTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKA********************************************
*************TSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALGIKT************************************
*******EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLAL****************************************
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MSDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKKGDKAEESTEAEPMDATNGAATQE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
P50580394 Proliferation-associated yes no 0.873 0.873 0.534 4e-95
Q9UQ80394 Proliferation-associated yes no 0.873 0.873 0.534 5e-95
Q1ZXG4385 Proliferation-associated yes no 0.901 0.922 0.437 2e-84
Q09184381 Curved DNA-binding protei yes no 0.860 0.889 0.437 4e-63
B8LUH2443 Methionine aminopeptidase N/A no 0.776 0.690 0.281 2e-32
A4RDI6443 Methionine aminopeptidase N/A no 0.776 0.690 0.275 6e-32
C0NIQ4448 Methionine aminopeptidase N/A no 0.784 0.689 0.295 2e-31
C9SB49442 Methionine aminopeptidase N/A no 0.781 0.696 0.259 3e-31
D4DE65449 Methionine aminopeptidase N/A no 0.794 0.697 0.297 4e-31
C5FF46447 Methionine aminopeptidase N/A no 0.784 0.691 0.288 4e-31
>sp|P50580|PA2G4_MOUSE Proliferation-associated protein 2G4 OS=Mus musculus GN=Pa2g4 PE=1 SV=3 Back     alignment and function desciption
 Score =  348 bits (893), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 192/359 (53%), Positives = 252/359 (70%), Gaps = 15/359 (4%)

Query: 5   EREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM 64
           E E++E  +    VVTKYK   +IAN+ L+ +V     GV ++ LCEKGD+ I E+TG +
Sbjct: 4   EDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKI 63

Query: 65  YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIAVVA 123
           +K  +K++++G+AFP+ +SVNN +CHFSPL SD+  +L+EGD++KIDLG H+DGFIA VA
Sbjct: 64  FKK-EKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVA 122

Query: 124 HTHVL---QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIV 180
           HT V+   Q   VTGR ADVI AA+  AE ALRLV+PG +N  VTEA  KVA + +C  +
Sbjct: 123 HTFVIGVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI 182

Query: 181 EGVLSHQLKQFVIDGNKVVLSVSNP-DTRVDD---AEFEENEVYAVDIVTSTGDGKPKLL 236
           EG+LSHQLKQ VIDG K +  + NP D +  D   AEFE +EVYAVD++ S+G+GK K  
Sbjct: 183 EGMLSHQLKQHVIDGEKTI--IQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA 240

Query: 237 DEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALE-EKRARLGLVECVNH 295
            ++ TTIYKR   K Y LKMK SR  FSE+ ++F  MPFT RA E EK+AR+G+VEC  H
Sbjct: 241 GQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKH 299

Query: 296 ELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQE--IQSTKTIDDPEIKAWL 352
           ELLQP+ VL+EK G++VA  KFTVLLMPNG  RITS   +    +S   + D E+KA L
Sbjct: 300 ELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALL 358
May play a role in a ERBB3-regulated signal transduction pathway. Seems be involved in growth regulation. Acts a corepressor of the androgen receptor (AR) and is regulated by the ERBB3 ligand neuregulin-1/heregulin (HRG). Inhibits transcription of some E2F1-regulated promoters, probably by recruiting histone acetylase (HAT) activity. Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Mediates cap-independent translation of specific viral IRESs (internal ribosomal entry site). Together with PTBP1 is required for the translation initiation on the foot-and-mouth disease virus (FMDV) IRES.
Mus musculus (taxid: 10090)
>sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Homo sapiens GN=PA2G4 PE=1 SV=3 Back     alignment and function description
>sp|Q1ZXG4|PRLA_DICDI Proliferation-associated protein A OS=Dictyostelium discoideum GN=prlA PE=2 SV=1 Back     alignment and function description
>sp|Q09184|CDB4_SCHPO Curved DNA-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cdb4 PE=1 SV=1 Back     alignment and function description
>sp|B8LUH2|AMP2A_TALSN Methionine aminopeptidase 2 homolog TSTA_071420 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_071420 PE=3 SV=1 Back     alignment and function description
>sp|A4RDI6|AMPM2_MAGO7 Methionine aminopeptidase 2 homolog MGG_00966 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_00966 PE=3 SV=1 Back     alignment and function description
>sp|C0NIQ4|AMP2A_AJECG Methionine aminopeptidase 2 homolog HCBG_02311 OS=Ajellomyces capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) GN=HCBG_02311 PE=3 SV=1 Back     alignment and function description
>sp|C9SB49|AMPM2_VERA1 Methionine aminopeptidase 2 homolog VDBG_01708 OS=Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) GN=VDBG_01708 PE=3 SV=1 Back     alignment and function description
>sp|D4DE65|AMPM2_TRIVH Methionine aminopeptidase 2 homolog TRV_05431 OS=Trichophyton verrucosum (strain HKI 0517) GN=TRV_05431 PE=3 SV=2 Back     alignment and function description
>sp|C5FF46|AMP2A_ARTOC Methionine aminopeptidase 2 homolog MCYG_01318 OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=MCYG_01318 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
99083509395 EBP1 [Ammopiptanthus mongolicus] gi|1463 1.0 0.997 0.883 0.0
224087772396 predicted protein [Populus trichocarpa] 0.997 0.992 0.908 0.0
255579318394 proliferation-associated 2g4, putative [ 1.0 1.0 0.921 0.0
359481168394 PREDICTED: proliferation-associated prot 1.0 1.0 0.911 0.0
357506033394 Proliferation-associated protein 2G4 [Me 1.0 1.0 0.885 0.0
217073888394 unknown [Medicago truncatula] gi|3885058 1.0 1.0 0.880 0.0
449439862393 PREDICTED: proliferation-associated prot 0.992 0.994 0.901 0.0
359806996394 uncharacterized protein LOC100781302 [Gl 1.0 1.0 0.878 0.0
356521042394 PREDICTED: proliferation-associated prot 1.0 1.0 0.880 0.0
449483513395 PREDICTED: LOW QUALITY PROTEIN: prolifer 0.992 0.989 0.891 0.0
>gi|99083509|gb|ABF66654.1| EBP1 [Ammopiptanthus mongolicus] gi|146336945|gb|ABQ23586.1| EBP1 [Ammopiptanthus mongolicus] Back     alignment and taxonomy information
 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/395 (88%), Positives = 380/395 (96%), Gaps = 1/395 (0%)

Query: 1   MSDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQ 60
           MSDDEREEKELDL+SPEVVTKYK+AAEI NKAL+LV+SECKP  KIVDLCEKGDS+IREQ
Sbjct: 1   MSDDEREEKELDLSSPEVVTKYKTAAEIVNKALKLVISECKPKAKIVDLCEKGDSYIREQ 60

Query: 61  TGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIA 120
           TGN+YKNVK+KIERGVAFP+C+SVNNT+CHFSPLASDETVL+EGD++KID+ CHIDGFIA
Sbjct: 61  TGNVYKNVKRKIERGVAFPTCISVNNTVCHFSPLASDETVLEEGDILKIDMACHIDGFIA 120

Query: 121 VVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIV 180
            VAHTHVL++GPVTGRAADVI AANTAAEVALRLVRPGKKNKDVT+AIQKVAAA+DCKIV
Sbjct: 121 AVAHTHVLEEGPVTGRAADVITAANTAAEVALRLVRPGKKNKDVTDAIQKVAAAYDCKIV 180

Query: 181 EGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQ 240
           EGVLSHQ+KQFVIDGNKVVLS SNPDTRVD+AEFEENEVYA+DIVTSTG+GKPKLLDEKQ
Sbjct: 181 EGVLSHQMKQFVIDGNKVVLSASNPDTRVDEAEFEENEVYAIDIVTSTGEGKPKLLDEKQ 240

Query: 241 TTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQP 300
           TTIYKRAVDK+YHLKMKASRFIFSEI+Q FPIMPF+ARALEEKRARLGLVECVNHELLQP
Sbjct: 241 TTIYKRAVDKSYHLKMKASRFIFSEISQNFPIMPFSARALEEKRARLGLVECVNHELLQP 300

Query: 301 YPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALGIKTKK 360
           YPVLHEKPGDYVAHIKFTVLLMPNGSDR+TS+ LQE+Q TKTIDDPEIKAWLALG KTKK
Sbjct: 301 YPVLHEKPGDYVAHIKFTVLLMPNGSDRVTSYPLQELQPTKTIDDPEIKAWLALGTKTKK 360

Query: 361 KGGGKKKKGKKG-DKAEESTEAEPMDATNGAATQE 394
           KGGGKKKKGKKG DKA+ES EAEPMD+TNGA  Q+
Sbjct: 361 KGGGKKKKGKKGEDKADESAEAEPMDSTNGATPQD 395

Source: Ammopiptanthus mongolicus

Species: Ammopiptanthus mongolicus

Genus: Ammopiptanthus

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224087772|ref|XP_002308228.1| predicted protein [Populus trichocarpa] gi|118486353|gb|ABK95017.1| unknown [Populus trichocarpa] gi|222854204|gb|EEE91751.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255579318|ref|XP_002530504.1| proliferation-associated 2g4, putative [Ricinus communis] gi|223529961|gb|EEF31888.1| proliferation-associated 2g4, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359481168|ref|XP_002262986.2| PREDICTED: proliferation-associated protein 2G4-like [Vitis vinifera] gi|296081116|emb|CBI18248.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357506033|ref|XP_003623305.1| Proliferation-associated protein 2G4 [Medicago truncatula] gi|355498320|gb|AES79523.1| Proliferation-associated protein 2G4 [Medicago truncatula] Back     alignment and taxonomy information
>gi|217073888|gb|ACJ85304.1| unknown [Medicago truncatula] gi|388505826|gb|AFK40979.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449439862|ref|XP_004137704.1| PREDICTED: proliferation-associated protein 2G4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359806996|ref|NP_001241588.1| uncharacterized protein LOC100781302 [Glycine max] gi|255638745|gb|ACU19677.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356521042|ref|XP_003529167.1| PREDICTED: proliferation-associated protein 2G4-like [Glycine max] Back     alignment and taxonomy information
>gi|449483513|ref|XP_004156612.1| PREDICTED: LOW QUALITY PROTEIN: proliferation-associated protein 2G4-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
TAIR|locus:2074373401 ATG2 [Arabidopsis thaliana (ta 0.984 0.967 0.728 5.4e-150
ZFIN|ZDB-GENE-030131-2182394 pa2g4b "proliferation-associat 0.972 0.972 0.483 9.3e-91
ZFIN|ZDB-GENE-030616-161392 pa2g4a "proliferation-associat 0.870 0.875 0.513 3.6e-89
RGD|1302994394 Pa2g4 "proliferation-associate 0.959 0.959 0.478 8.6e-88
MGI|MGI:894684394 Pa2g4 "proliferation-associate 0.959 0.959 0.476 3.7e-87
UNIPROTKB|Q9UQ80394 PA2G4 "Proliferation-associate 0.873 0.873 0.509 7.7e-87
UNIPROTKB|Q3ZBH5394 PA2G4 "Uncharacterized protein 0.870 0.870 0.513 1.3e-86
UNIPROTKB|E2QW49394 PA2G4 "Uncharacterized protein 0.870 0.870 0.513 1.3e-86
UNIPROTKB|F8VTY8376 PA2G4 "Proliferation-associate 0.868 0.909 0.509 1.3e-86
UNIPROTKB|H9KZC8353 PA2G4 "Uncharacterized protein 0.802 0.895 0.504 4.7e-80
TAIR|locus:2074373 ATG2 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1464 (520.4 bits), Expect = 5.4e-150, P = 5.4e-150
 Identities = 290/398 (72%), Positives = 322/398 (80%)

Query:     2 SDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQT 61
             SDDER+EKEL LTSPEVVTKYKSAAEI NKALQ+V++ECKP  KIVD+CEKGDSFI+EQT
Sbjct:     3 SDDERDEKELSLTSPEVVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKEQT 62

Query:    62 GNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAV 121
              +MYKN KKKIERGVAFP+C+SVNNT+ HFSPLASDE+VL++GDM+KID+GCHIDGFIA+
Sbjct:    63 ASMYKNSKKKIERGVAFPTCISVNNTVGHFSPLASDESVLEDGDMVKIDMGCHIDGFIAL 122

Query:   122 VAHTHVLQDGPVTGRXXXXXXXXXXXXXXXLRLVRPGKKNKDVTEAIQKVAAAHDCKIVE 181
             V HTHVLQ+GP++GR               LRLVRPGKKN DVTEAIQKVAAA+DCKIVE
Sbjct:   123 VGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKKNTDVTEAIQKVAAAYDCKIVE 182

Query:   182 GVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQT 241
             GVLSHQLKQ VIDGNKVVLSVS+P+T VD+ EFEENEVYA+DIV STGDGKPKLLDEKQT
Sbjct:   183 GVLSHQLKQHVIDGNKVVLSVSSPETTVDEVEFEENEVYAIDIVASTGDGKPKLLDEKQT 242

Query:   242 TIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPY 301
             TIYK+    NY LKMKASRFI SEI Q FP MPFTAR+LEEKRARLGLVECVNH  LQPY
Sbjct:   243 TIYKKDESVNYQLKMKASRFIISEIKQNFPRMPFTARSLEEKRARLGLVECVNHGHLQPY 302

Query:   302 PVLHEKPG---------DYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWL 352
             PVL+EKPG         D+VA IKFTVLLMPNGSDRITSHTLQE+   KTI+DPEIK WL
Sbjct:   303 PVLYEKPGSCRFGFLPGDFVAQIKFTVLLMPNGSDRITSHTLQELPK-KTIEDPEIKGWL 361

Query:   353 ALXXXXXXXXXXXXXXXXXXXXAEESTEAEPMDATNGA 390
             AL                     E STEAEPMDA++ A
Sbjct:   362 ALGIKKKKGGGKKKKAQKAGEKGEASTEAEPMDASSNA 399
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008235 "metalloexopeptidase activity" evidence=IEA;ISS
GO:0009987 "cellular process" evidence=IEA
GO:0005730 "nucleolus" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0001510 "RNA methylation" evidence=RCA
GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA
GO:0006606 "protein import into nucleus" evidence=RCA
GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA
GO:0009640 "photomorphogenesis" evidence=RCA
GO:0010388 "cullin deneddylation" evidence=RCA
ZFIN|ZDB-GENE-030131-2182 pa2g4b "proliferation-associated 2G4, b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-161 pa2g4a "proliferation-associated 2G4, a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1302994 Pa2g4 "proliferation-associated 2G4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:894684 Pa2g4 "proliferation-associated 2G4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UQ80 PA2G4 "Proliferation-associated protein 2G4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZBH5 PA2G4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QW49 PA2G4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F8VTY8 PA2G4 "Proliferation-associated protein 2G4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H9KZC8 PA2G4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P50580PA2G4_MOUSENo assigned EC number0.53480.87300.8730yesno
Q1ZXG4PRLA_DICDINo assigned EC number0.43750.90100.9220yesno
Q9UQ80PA2G4_HUMANNo assigned EC number0.53480.87300.8730yesno
Q09184CDB4_SCHPONo assigned EC number0.43750.86040.8897yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
TIGR00495389 TIGR00495, crvDNA_42K, 42K curved DNA binding prot 0.0
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 3e-83
cd01088291 cd01088, MetAP2, Methionine Aminopeptidase 2 1e-53
PRK08671291 PRK08671, PRK08671, methionine aminopeptidase; Pro 2e-48
COG0024255 COG0024, Map, Methionine aminopeptidase [Translati 2e-47
TIGR00501295 TIGR00501, met_pdase_II, methionine aminopeptidase 2e-43
PTZ00053470 PTZ00053, PTZ00053, methionine aminopeptidase 2; P 3e-34
pfam00557208 pfam00557, Peptidase_M24, Metallopeptidase family 1e-30
PRK05716252 PRK05716, PRK05716, methionine aminopeptidase; Val 2e-19
TIGR00500247 TIGR00500, met_pdase_I, methionine aminopeptidase, 1e-18
cd01086238 cd01086, MetAP1, Methionine Aminopeptidase 1 1e-18
cd01066207 cd01066, APP_MetAP, A family including aminopeptid 1e-18
PRK12896255 PRK12896, PRK12896, methionine aminopeptidase; Rev 7e-15
cd01089228 cd01089, PA2G4-like, Related to aminopepdidase M, 8e-14
PLN03158396 PLN03158, PLN03158, methionine aminopeptidase; Pro 2e-10
COG0006384 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid 1e-09
PRK12318291 PRK12318, PRK12318, methionine aminopeptidase; Pro 3e-07
cd01092208 cd01092, APP-like, Similar to Prolidase and Aminop 1e-06
PRK15173323 PRK15173, PRK15173, peptidase; Provisional 9e-05
PRK14575406 PRK14575, PRK14575, putative peptidase; Provisiona 9e-05
cd01087243 cd01087, Prolidase, Prolidase 1e-04
PRK10879438 PRK10879, PRK10879, proline aminopeptidase P II; P 2e-04
PRK12897248 PRK12897, PRK12897, methionine aminopeptidase; Rev 4e-04
PRK14576405 PRK14576, PRK14576, putative endopeptidase; Provis 0.001
>gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein Back     alignment and domain information 
 Score =  543 bits (1401), Expect = 0.0
 Identities = 235/393 (59%), Positives = 287/393 (73%), Gaps = 14/393 (3%)

Query: 2   SDDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQT 61
             DE++E+   L++PEVVTKYK A EIAN  L+ VV  C PG K+VD+CEKGD+FI E+T
Sbjct: 2   GKDEQQEQAYSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEET 61

Query: 62  GNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET-VLQEGDMIKIDLGCHIDGFIA 120
             ++K  +K++E+G+AFP+C+SVNN + HFSPL SD+  +L+EGD++KIDLGCHIDGFIA
Sbjct: 62  AKIFKK-EKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIA 120

Query: 121 VVAHTHVL---QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDC 177
           +VAHT V+   Q+ PVTGR ADVIAAA+ AAE ALRLV+PG  N  VTEAI KVA ++ C
Sbjct: 121 LVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGC 180

Query: 178 KIVEGVLSHQLKQFVIDGNKVVLSVSNPDTR--VDDAEFEENEVYAVDIVTSTGDGKPKL 235
             VEG+LSHQLKQ VIDG KV++S  +   +   D AEFEENEVYAVDI+ STG+GK K 
Sbjct: 181 TPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKD 240

Query: 236 LDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALE-EKRARLGLVECVN 294
            D++ TTIYKR   K Y LKMKASR  FSEI ++F  MPFT R  E EKRAR+GLVECV 
Sbjct: 241 ADQR-TTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVK 299

Query: 295 HELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQE--IQSTKTIDDPEIKAWL 352
           HELLQPYPVL+EK G++VA  KFTVLLMPNG  RITS   +    +S   + DPEIKA L
Sbjct: 300 HELLQPYPVLYEKEGEFVAQFKFTVLLMPNGPMRITSGEFEPDLYKSEMEVQDPEIKALL 359

Query: 353 ALGIKTKKKGGGKKKKGKKGDKAEESTEAEPMD 385
           A  IK KK    KKK  K     E +TE E M+
Sbjct: 360 ASPIKRKK---QKKKAKKASKTGEAATEGETME 389

Proteins identified by This model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein [Unknown function, General]. Length = 389
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 Back     alignment and domain information
>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II Back     alignment and domain information
>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 Back     alignment and domain information
>gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated Back     alignment and domain information
>gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I Back     alignment and domain information
>gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 Back     alignment and domain information
>gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>gnl|CDD|215607 PLN03158, PLN03158, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|183434 PRK12318, PRK12318, methionine aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|238525 cd01092, APP-like, Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>gnl|CDD|185095 PRK15173, PRK15173, peptidase; Provisional Back     alignment and domain information
>gnl|CDD|173039 PRK14575, PRK14575, putative peptidase; Provisional Back     alignment and domain information
>gnl|CDD|238520 cd01087, Prolidase, Prolidase Back     alignment and domain information
>gnl|CDD|182804 PRK10879, PRK10879, proline aminopeptidase P II; Provisional Back     alignment and domain information
>gnl|CDD|171806 PRK12897, PRK12897, methionine aminopeptidase; Reviewed Back     alignment and domain information
>gnl|CDD|173040 PRK14576, PRK14576, putative endopeptidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 100.0
KOG2776398 consensus Metallopeptidase [General function predi 100.0
PTZ00053470 methionine aminopeptidase 2; Provisional 100.0
PRK08671291 methionine aminopeptidase; Provisional 100.0
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 100.0
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 100.0
COG0024255 Map Methionine aminopeptidase [Translation, riboso 100.0
KOG2738369 consensus Putative methionine aminopeptidase [Post 100.0
PLN03158396 methionine aminopeptidase; Provisional 100.0
PRK12897248 methionine aminopeptidase; Reviewed 100.0
PRK07281286 methionine aminopeptidase; Reviewed 100.0
PRK12896255 methionine aminopeptidase; Reviewed 100.0
PRK12318291 methionine aminopeptidase; Provisional 100.0
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 100.0
KOG2775397 consensus Metallopeptidase [General function predi 100.0
PRK05716252 methionine aminopeptidase; Validated 100.0
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 100.0
PRK09795361 aminopeptidase; Provisional 100.0
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 100.0
PRK15173323 peptidase; Provisional 100.0
PRK10879438 proline aminopeptidase P II; Provisional 100.0
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 100.0
PRK14575406 putative peptidase; Provisional 100.0
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 100.0
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 100.0
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 100.0
PRK14576405 putative endopeptidase; Provisional 100.0
PRK13607443 proline dipeptidase; Provisional 100.0
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 100.0
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 100.0
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 100.0
cd01091243 CDC68-like Related to aminopeptidase P and aminope 100.0
cd01066207 APP_MetAP A family including aminopeptidase P, ami 100.0
KOG2414488 consensus Putative Xaa-Pro aminopeptidase [Amino a 100.0
KOG2737492 consensus Putative metallopeptidase [General funct 100.0
KOG1189 960 consensus Global transcriptional regulator, cell d 99.89
KOG2413606 consensus Xaa-Pro aminopeptidase [Amino acid trans 99.86
COG5406 1001 Nucleosome binding factor SPN, SPT16 subunit [Tran 99.69
cd01066207 APP_MetAP A family including aminopeptidase P, ami 96.85
cd01091243 CDC68-like Related to aminopeptidase P and aminope 96.67
cd01092208 APP-like Similar to Prolidase and Aminopeptidase P 96.5
PRK05716252 methionine aminopeptidase; Validated 96.18
TIGR02993391 ectoine_eutD ectoine utilization protein EutD. Mem 96.16
cd01090228 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. 96.15
TIGR00500247 met_pdase_I methionine aminopeptidase, type I. Met 96.1
PLN03158396 methionine aminopeptidase; Provisional 96.08
PRK12318291 methionine aminopeptidase; Provisional 96.08
cd01087243 Prolidase Prolidase. E.C. 3.4.13.9. Also known as 96.05
PRK12896255 methionine aminopeptidase; Reviewed 96.03
KOG2738369 consensus Putative methionine aminopeptidase [Post 95.92
PRK12897248 methionine aminopeptidase; Reviewed 95.89
cd01086238 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 95.66
PRK09795361 aminopeptidase; Provisional 95.62
PRK07281286 methionine aminopeptidase; Reviewed 95.56
cd01088291 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 95.39
PRK14575406 putative peptidase; Provisional 95.3
PF00557207 Peptidase_M24: Metallopeptidase family M24 This Pr 95.3
PRK15173323 peptidase; Provisional 94.81
COG0024255 Map Methionine aminopeptidase [Translation, riboso 94.7
cd01089228 PA2G4-like Related to aminopepdidase M, this famil 94.62
PRK08671291 methionine aminopeptidase; Provisional 94.51
PRK14576405 putative endopeptidase; Provisional 94.43
TIGR00495389 crvDNA_42K 42K curved DNA binding protein. Protein 93.85
TIGR00501295 met_pdase_II methionine aminopeptidase, type II. M 93.62
COG0006384 PepP Xaa-Pro aminopeptidase [Amino acid transport 93.42
PRK10879438 proline aminopeptidase P II; Provisional 91.79
PTZ00053470 methionine aminopeptidase 2; Provisional 91.54
cd01085224 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also 84.78
PRK13607443 proline dipeptidase; Provisional 84.42
KOG1189 960 consensus Global transcriptional regulator, cell d 81.28
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information 
Probab=100.00  E-value=8.1e-93  Score=706.70  Aligned_cols=364  Identities=62%  Similarity=0.946  Sum_probs=332.3

Q ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCC
Q 016183            6 REEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVN   85 (394)
Q Consensus         6 ~~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n   85 (394)
                      +++.+..||+++||++||+||+|++++++.+.+.++||+|+.|||+.++++|.++++..|.+.+ .++.|++||+|+|+|
T Consensus         6 ~~~~~~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~-~~~~g~afpt~vSvN   84 (389)
T TIGR00495         6 QQEQAYSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEK-EMEKGIAFPTCISVN   84 (389)
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccc-cccCCCCCCeEEecC
Confidence            4566779999999999999999999999999999999999999999999999999888776532 256799999999999


Q ss_pred             CcccCCCCCCCC-CccccCCCEEEEEeeeEECceEEeEEEEEEeCC---CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 016183           86 NTLCHFSPLASD-ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQD---GPVTGRAADVIAAANTAAEVALRLVRPGKKN  161 (394)
Q Consensus        86 ~~~~H~~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~---~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~  161 (394)
                      ++++||+|..++ +++|++||+|+||+|+++|||++|++|||+||+   .+++++++++++++++|++++++++|||+++
T Consensus        85 ~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~  164 (389)
T TIGR00495        85 NCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTN  164 (389)
T ss_pred             CeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence            999999997544 488999999999999999999999999999994   2367899999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCC--CCCCCceeeCCcEEEEceeeecCCCCCcccCCC
Q 016183          162 KDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPD--TRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEK  239 (394)
Q Consensus       162 ~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~--~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~  239 (394)
                      +||+++++++++++||.++++++|||||+++||+.+.|+++++..  .++.+.+|++||||+|||++++|+|+++..+++
T Consensus       165 ~dI~~ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~  244 (389)
T TIGR00495       165 TQVTEAINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQR  244 (389)
T ss_pred             HHHHHHHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCe
Confidence            999999999999999999999999999999999555765554432  234678999999999999999999999886664


Q ss_pred             ceEEEecccccccccCchhHHHHHHHHHhhCCCCcccccc-chhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEE
Q 016183          240 QTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARA-LEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFT  318 (394)
Q Consensus       240 ~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~T  318 (394)
                       ||||+|+.+.+|+|||++||++|++|+++|++|||++|| +|+++++|||+||++||+|.|||||++++|++||||+||
T Consensus       245 -~tiy~~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~T  323 (389)
T TIGR00495       245 -TTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFT  323 (389)
T ss_pred             -eEEEEECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEE
Confidence             999999999999999999999999999999999999999 578899999999999999999999999999999999999


Q ss_pred             EEEcCCCceeecCCCC--ccccCCCCCCcHHHHHHHHccccccccCCCCCcCCCC
Q 016183          319 VLLMPNGSDRITSHTL--QEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKK  371 (394)
Q Consensus       319 vlvt~~G~~~lT~~~~--~~~~s~~~~~d~e~~~ll~~~~~~~~~~~~~~~~~~~  371 (394)
                      |+|++||+.+||+.|+  ++++|+++++||||++||++|++++|+|||+++++++
T Consensus       324 v~v~~~g~~~~t~~~~~~~~~~s~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~  378 (389)
T TIGR00495       324 VLLMPNGPMRITSGEFEPDLYKSEMEVQDPEIKALLASPIKRKKQKKKAKKASKT  378 (389)
T ss_pred             EEECCCCcEEeCCCCCCHhhcCCCCCCCCHHHHHHHhCccccccccccccccccc
Confidence            9999999999999764  8899999999999999999999888777777766644

Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
>KOG2776 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>KOG2775 consensus Metallopeptidase [General function prediction only] Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2737 consensus Putative metallopeptidase [General function prediction only] Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] Back     alignment and domain information
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase Back     alignment and domain information
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor Back     alignment and domain information
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P Back     alignment and domain information
>PRK05716 methionine aminopeptidase; Validated Back     alignment and domain information
>TIGR02993 ectoine_eutD ectoine utilization protein EutD Back     alignment and domain information
>cd01090 Creatinase Creatine amidinohydrolase Back     alignment and domain information
>TIGR00500 met_pdase_I methionine aminopeptidase, type I Back     alignment and domain information
>PLN03158 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK12318 methionine aminopeptidase; Provisional Back     alignment and domain information
>cd01087 Prolidase Prolidase Back     alignment and domain information
>PRK12896 methionine aminopeptidase; Reviewed Back     alignment and domain information
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12897 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01086 MetAP1 Methionine Aminopeptidase 1 Back     alignment and domain information
>PRK09795 aminopeptidase; Provisional Back     alignment and domain information
>PRK07281 methionine aminopeptidase; Reviewed Back     alignment and domain information
>cd01088 MetAP2 Methionine Aminopeptidase 2 Back     alignment and domain information
>PRK14575 putative peptidase; Provisional Back     alignment and domain information
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK15173 peptidase; Provisional Back     alignment and domain information
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 Back     alignment and domain information
>PRK08671 methionine aminopeptidase; Provisional Back     alignment and domain information
>PRK14576 putative endopeptidase; Provisional Back     alignment and domain information
>TIGR00495 crvDNA_42K 42K curved DNA binding protein Back     alignment and domain information
>TIGR00501 met_pdase_II methionine aminopeptidase, type II Back     alignment and domain information
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10879 proline aminopeptidase P II; Provisional Back     alignment and domain information
>PTZ00053 methionine aminopeptidase 2; Provisional Back     alignment and domain information
>cd01085 APP X-Prolyl Aminopeptidase 2 Back     alignment and domain information
>PRK13607 proline dipeptidase; Provisional Back     alignment and domain information
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
2q8k_A401 The Crystal Structure Of Ebp1 Length = 401 4e-90
3j2i_A394 Structure Of Late Pre-60s Ribosomal Subunits With N 5e-90
2v6c_A353 Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) 3e-88
4ipa_A423 Structure Of A Thermophilic Arx1 Length = 423 1e-41
1b6a_A478 Human Methionine Aminopeptidase 2 Complexed With Tn 4e-28
1qzy_A478 Human Methionine Aminopeptidase In Complex With Ben 5e-28
1b59_A370 Complex Of Human Methionine Aminopeptidase-2 Comple 6e-28
1r58_A369 Crystal Structure Of Metap2 Complexed With A357300 8e-28
1xgs_A295 Methionine Aminopeptidase From Hyperthermophile Pyr 3e-22
2dfi_A301 Crystal Structure Of Pf-Map(1-292)-C Length = 301 3e-22
3fm3_A358 Crystal Structure Of An Encephalitozoon Cuniculi Me 9e-12
4b6a_t614 Cryo-Em Structure Of The 60s Ribosomal Subunit In C 4e-11
3mat_A265 E.coli Methionine Aminopeptidase Transition-state I 1e-08
4mat_A278 E.Coli Methionine Aminopeptidase His79ala Mutant Le 1e-08
1c27_A263 E. Coli Methionine Aminopeptidase:norleucine Phosph 1e-08
2mat_A264 E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re 1e-08
3mx6_A262 Crystal Structure Of Methionine Aminopeptidase From 2e-08
3mr1_A252 Crystal Structure Of Methionine Aminopeptidase From 3e-08
4a6v_A265 X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn 4e-08
2p98_A262 E. Coli Methionine Aminopeptidase Monometalated Wit 4e-08
2gg0_A263 Novel Bacterial Methionine Aminopeptidase Inhibitor 4e-08
1xnz_A264 Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio 4e-08
2p99_A261 E. Coli Methionine Aminopeptidase Monometalated Wit 4e-08
2gtx_A261 Structural Basis Of Catalysis By Mononuclear Methio 5e-08
2gu4_A263 E. Coli Methionine Aminopeptidase In Complex With N 6e-08
4fuk_A337 Aminopeptidase From Trypanosoma Brucei Length = 337 1e-06
1o0x_A262 Crystal Structure Of Methionine Aminopeptidase (Tm1 3e-06
3iu7_A288 M. Tuberculosis Methionine Aminopeptidase With Mn I 1e-05
1y1n_A291 Identification Of Sh3 Motif In M. Tuberculosis Meth 1e-05
3pka_A285 M. Tuberculosis Metap With Bengamide Analog Y02, In 1e-05
2bwu_A440 Asp271ala Escherichia Coli Aminopeptidase P Length 1e-05
4fli_A326 Human Metap1 With Bengamide Analog Y16, In Mn Form 2e-05
3tav_A286 Crystal Structure Of A Methionine Aminopeptidase Fr 2e-05
2g6p_A304 Crystal Structure Of Truncated (Delta 1-89) Human M 2e-05
2b3h_A329 Crystal Structure Of Human Methionine Aminopeptidas 2e-05
2bwv_A440 His361ala Escherichia Coli Aminopeptidase P Length 2e-05
1wl9_A440 Structure Of Aminopeptidase P From E. Coli Length = 2e-05
2v3z_A440 Glu383ala Escherichia Coli Aminopeptidase P In Comp 3e-05
1m35_A440 Aminopeptidase P From Escherichia Coli Length = 440 3e-05
1jaw_A440 Aminopeptidase P From E. Coli Low Ph Form Length = 3e-05
2bww_A440 His350ala Escherichia Coli Aminopeptidase P Length 3e-05
2bwy_A440 Glu383ala Escherichia Coli Aminopeptidase P Length 3e-05
3ror_A291 Crystal Structure Of C105s Mutant Of Mycobacterium 4e-05
2bws_A440 His243ala Escherichia Coli Aminopeptidase P Length 6e-05
2bwx_A441 His354ala Escherichia Coli Aminopeptidase P Length 1e-04
3tb5_A264 Crystal Structure Of The Enterococcus Faecalis Meth 2e-04
2bwt_A440 Asp260ala Escherichia Coli Aminopeptidase P Length 2e-04
1qxw_A252 Crystal Structure Of Staphyloccocus Aureus In Compl 7e-04
>pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 Back     alignment and structure 
Iteration: 1

 Score =  328 bits (840), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 183/359 (50%), Positives = 242/359 (67%), Gaps = 15/359 (4%)
Query: 5   EREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM 64
           E E++E  +    VVTKYK   +IAN+ L+ +V     GV ++ LCEKGD+ I E+TG +
Sbjct: 11  EDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKI 70
Query: 65  YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIAVVA 123
           +K  +K++++G+AFP+ +SVNN +CHFSPL SD+  +L+EGD++KIDLG H+DGFIA VA
Sbjct: 71  FKK-EKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVA 129
Query: 124 HTHVL---QDGPVTGRXXXXXXXXXXXXXXXLRLVRPGKKNKDVTEAIQKVAAAHDCKIV 180
           HT V+   Q   VTGR               LRLV+PG +N  VTEA  KVA + +C  +
Sbjct: 130 HTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI 189
Query: 181 EGVLSHQLKQFVIDGNKVVLSVSNP-DTRVDD---AEFEENEVYAVDIVTSTGDGKPKLL 236
           EG+LSHQLKQ VIDG K +  + NP D +  D   AEFE +EVYAVD++ S+G+GK K  
Sbjct: 190 EGMLSHQLKQHVIDGEKTI--IQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA 247
Query: 237 DEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALE-EKRARLGLVECVNH 295
            ++ TTIYKR   K Y LKMK SR  FSE+ ++F  MPFT RA E EK+AR+G+VEC  H
Sbjct: 248 GQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKH 306
Query: 296 ELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQE--IQSTKTIDDPEIKAWL 352
           ELLQP+ VL+EK G++VA  KFTVLLMPNG  RITS   +    +S   + D E+KA L
Sbjct: 307 ELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALL 365
>pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 Back     alignment and structure
>pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 Back     alignment and structure
>pdb|4IPA|A Chain A, Structure Of A Thermophilic Arx1 Length = 423 Back     alignment and structure
>pdb|1B6A|A Chain A, Human Methionine Aminopeptidase 2 Complexed With Tnp-470 Length = 478 Back     alignment and structure
>pdb|1QZY|A Chain A, Human Methionine Aminopeptidase In Complex With Bengamide Inhibitor Laf153 And Cobalt Length = 478 Back     alignment and structure
>pdb|1B59|A Chain A, Complex Of Human Methionine Aminopeptidase-2 Complexed With Ovalicin Length = 370 Back     alignment and structure
>pdb|1R58|A Chain A, Crystal Structure Of Metap2 Complexed With A357300 Length = 369 Back     alignment and structure
>pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 Back     alignment and structure
>pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 Back     alignment and structure
>pdb|3FM3|A Chain A, Crystal Structure Of An Encephalitozoon Cuniculi Methionine Aminopeptidase Type 2 Length = 358 Back     alignment and structure
>pdb|4B6A|TT Chain t, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1 Length = 614 Back     alignment and structure
>pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 Back     alignment and structure
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 Back     alignment and structure
>pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 Back     alignment and structure
>pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 Back     alignment and structure
>pdb|3MX6|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Bound To Methionine Length = 262 Back     alignment and structure
>pdb|3MR1|A Chain A, Crystal Structure Of Methionine Aminopeptidase From Ricketts Prowazekii Length = 252 Back     alignment and structure
>pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 Back     alignment and structure
>pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 Back     alignment and structure
>pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 Back     alignment and structure
>pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 Back     alignment and structure
>pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 Back     alignment and structure
>pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 Back     alignment and structure
>pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 Back     alignment and structure
>pdb|4FUK|A Chain A, Aminopeptidase From Trypanosoma Brucei Length = 337 Back     alignment and structure
>pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 Back     alignment and structure
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn Inhibitor A02 Length = 288 Back     alignment and structure
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis Methionine Aminopeptidase Suggests A Mode Of Interaction With The Ribosome Length = 291 Back     alignment and structure
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn Form Length = 285 Back     alignment and structure
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|4FLI|A Chain A, Human Metap1 With Bengamide Analog Y16, In Mn Form Length = 326 Back     alignment and structure
>pdb|3TAV|A Chain A, Crystal Structure Of A Methionine Aminopeptidase From Mycobacterium Abscessus Length = 286 Back     alignment and structure
>pdb|2G6P|A Chain A, Crystal Structure Of Truncated (Delta 1-89) Human Methionine Aminopeptidase Type 1 In Complex With Pyridyl Pyrimidine Derivative Length = 304 Back     alignment and structure
>pdb|2B3H|A Chain A, Crystal Structure Of Human Methionine Aminopeptidase Type I With A Third Cobalt In The Active Site Length = 329 Back     alignment and structure
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli Length = 440 Back     alignment and structure
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex With Substrate Length = 440 Back     alignment and structure
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli Length = 440 Back     alignment and structure
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form Length = 440 Back     alignment and structure
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium Tuberculosis Methionine Aminopeptidase Length = 291 Back     alignment and structure
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|3TB5|A Chain A, Crystal Structure Of The Enterococcus Faecalis Methionine Aminopeptidase Apo Form Length = 264 Back     alignment and structure
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P Length = 440 Back     alignment and structure
>pdb|1QXW|A Chain A, Crystal Structure Of Staphyloccocus Aureus In Complex With An Aminoketone Inhibitor 54135. Length = 252 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 1e-152
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 1e-127
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 1e-119
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 1e-114
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 4e-17
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 4e-16
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 7e-16
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 2e-15
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 2e-15
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 2e-15
3mx6_A262 Methionine aminopeptidase; seattle structural geno 6e-15
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 1e-14
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 8e-14
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 5e-10
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 1e-08
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 3e-07
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 6e-07
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 1e-06
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 1e-06
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 8e-06
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 1e-04
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 2e-04
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 8e-04
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 Back     alignment and structure
 Score =  436 bits (1122), Expect = e-152
 Identities = 198/397 (49%), Positives = 263/397 (66%), Gaps = 14/397 (3%)

Query: 3   DDEREEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTG 62
             E E++E  +    VVTKYK   +IAN+ L+ +V     GV ++ LCEKGD+ I E+TG
Sbjct: 9   SGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETG 68

Query: 63  NMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET-VLQEGDMIKIDLGCHIDGFIAV 121
            ++K  +K++++G+AFP+ +SVNN +CHFSPL SD+  +L+EGD++KIDLG H+DGFIA 
Sbjct: 69  KIFKK-EKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIAN 127

Query: 122 VAHTHVL---QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCK 178
           VAHT V+   Q   VTGR ADVI AA+  AE ALRLV+PG +N  VTEA  KVA + +C 
Sbjct: 128 VAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCT 187

Query: 179 IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRV--DDAEFEENEVYAVDIVTSTGDGKPKLL 236
            +EG+LSHQLKQ VIDG K ++       +   + AEFE +EVYAVD++ S+G+GK K  
Sbjct: 188 PIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA 247

Query: 237 DEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALE-EKRARLGLVECVNH 295
            ++ TTIYKR   K Y LKMK SR  FSE+ ++F  MPFT RA E EK+AR+G+VEC  H
Sbjct: 248 GQR-TTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKH 306

Query: 296 ELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQE--IQSTKTIDDPEIKAWLA 353
           ELLQP+ VL+EK G++VA  KFTVLLMPNG  RITS   +    +S   + D E+KA L 
Sbjct: 307 ELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQ 366

Query: 354 LGIKTKKKGGGKKKKGKKGDKAEESTEAEPMDATNGA 390
                K +   KKKK K    AE +T  E ++     
Sbjct: 367 SSASRKTQ---KKKKKKASKTAENATSGETLEENEAG 400
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Length = 401 Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Length = 402 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Length = 470 Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Length = 351 Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Length = 356 Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Length = 359 Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Length = 356 Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Length = 378 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Length = 451 Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Length = 517 Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 100.0
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 100.0
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 100.0
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 100.0
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 100.0
4b6a_t614 Probable metalloprotease ARX1; large ribosomal sub 100.0
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 100.0
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 100.0
4fuk_A337 Methionine aminopeptidase; structural genomics con 100.0
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 100.0
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 100.0
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 100.0
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 100.0
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 100.0
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 100.0
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 100.0
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 100.0
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 100.0
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 100.0
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 100.0
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 100.0
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 100.0
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 100.0
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 100.0
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 100.0
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 100.0
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 100.0
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 100.0
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 100.0
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 100.0
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 100.0
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 100.0
3mx6_A262 Methionine aminopeptidase; seattle structural geno 96.34
3pka_A285 Methionine aminopeptidase; hydrolase-hydrolase inh 95.66
3q6d_A356 Proline dipeptidase; structural genomics, csgid, c 95.65
2gg2_A263 Methionine aminopeptidase; PITA-bread fold, MAP in 95.53
3tb5_A264 Methionine aminopeptidase; hydrolase, metalloprote 95.45
3fm3_A358 Methionine aminopeptidase 2; metap2, structural ge 95.38
1o0x_A262 Methionine aminopeptidase; TM1478, structural geno 95.35
1qxy_A252 Methionyl aminopeptidase; PITA bread fold, hydrola 95.34
3cb6_A444 FACT complex subunit SPT16; peptidase homology dom 95.32
1wy2_A351 XAA-Pro dipeptidase; structural genomics, prolidas 95.26
2zsg_A359 Aminopeptidase P, putative; hydrolase; 1.65A {Ther 95.12
4ege_A378 Dipeptidase PEPE; structural genomics, seattle str 95.05
1wn1_A356 Dipeptidase; prolidase, cobalt(II), structural gen 95.05
3tav_A286 Methionine aminopeptidase; ssgcid, seattle structu 94.99
3s6b_A368 Methionine aminopeptidase; malaria, proteolysis, " 94.48
2b3h_A329 Methionine aminopeptidase 1; hydrolase, metallopro 94.38
3biq_A467 FACT complex subunit SPT16; PITA-bread, aminopepti 94.37
4fkc_A377 XAA-Pro aminopeptidase; PITA-bread structure, prol 94.36
2v3z_A440 XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli 93.98
4fuk_A337 Methionine aminopeptidase; structural genomics con 93.65
3ig4_A427 XAA-Pro aminopeptidase; csgid, hydrolase, struct g 93.35
1kp0_A402 Creatine amidinohydrolase; alpha betal, 3-layer(AB 92.67
1xgs_A295 Methionine aminopeptidase; hyperthermophIle; 1.75A 92.67
1b6a_A478 Methionine aminopeptidase; angiogenesis inhibitor; 92.6
2nw5_A360 Methionine aminopeptidase 2; metap2, structural ge 92.52
2q8k_A401 Proliferation-associated protein 2G4; EBP1, PA2G4, 91.51
1chm_A401 Creatine amidinohydrolase; creatinase; 1.90A {Pseu 91.14
3rva_A451 Organophosphorus acid anhydrolase; PITA-bread fold 90.11
4b28_A470 Metallopeptidase, family M24, putative; lyase, ime 88.2
2iw2_A494 XAA-Pro dipeptidase; metallocarboxypeptidase, dise 87.92
3l24_A517 XAA-Pro dipeptidase; PITA-bread, detoxification, h 85.04
3ctz_A623 XAA-Pro aminopeptidase 1; PITA-bread fold, alterna 80.66
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
Probab=100.00  E-value=6.2e-89  Score=683.31  Aligned_cols=362  Identities=52%  Similarity=0.838  Sum_probs=316.5

Q ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCc
Q 016183            8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNT   87 (394)
Q Consensus         8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~   87 (394)
                      +++|.|||++||++||+|++|++++++.+.+.++||+|+.||++.++++|.++|+..|.+.. ..+.|++||+|+|+|++
T Consensus        14 ~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga~~~~~~~-~~~~g~~f~~~vS~N~~   92 (401)
T 2q8k_A           14 QQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEK-EMKKGIAFPTSISVNNC   92 (401)
T ss_dssp             CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHTSSTTCT-TCCEEEEEEEEEEETTE
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCChhhcccc-cccCCCCCCcEEeCCcc
Confidence            56889999999999999999999999999999999999999999999999999886675421 13467899999999999


Q ss_pred             ccCCCCCCCC-CccccCCCEEEEEeeeEECceEEeEEEEEEeC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhH
Q 016183           88 LCHFSPLASD-ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ---DGPVTGRAADVIAAANTAAEVALRLVRPGKKNKD  163 (394)
Q Consensus        88 ~~H~~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG---~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~d  163 (394)
                      +|||+|.+++ +++|++||+|+||+|++|+||++|++|||+||   +++++++++++|+++++|++++++++|||++++|
T Consensus        93 v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~~d  172 (401)
T 2q8k_A           93 VCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQ  172 (401)
T ss_dssp             EECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBHHH
T ss_pred             cccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHH
Confidence            9999996443 58999999999999999999999999999999   2348999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCC--CCCceeeCCcEEEEceeeecCCCCCcccCCCce
Q 016183          164 VTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTR--VDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQT  241 (394)
Q Consensus       164 V~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~--~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~  241 (394)
                      |+.+++++++++||.++++++|||||+++||.|..|+.+++.+.+  +.+.+|++||||+|||++++|+|+++..+|+ |
T Consensus       173 I~~ai~~~~~~~G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~-~  251 (401)
T 2q8k_A          173 VTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQR-T  251 (401)
T ss_dssp             HHHHHHHHHHTTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCC-C
T ss_pred             HHHHHHHHHHHcCCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCC-c
Confidence            999999999999999999999999999999999645433321111  2467999999999999999999999987776 9


Q ss_pred             EEEecccccccccCchhHHHHHHHHHhhCCCCcccccc-chhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEE
Q 016183          242 TIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARA-LEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVL  320 (394)
Q Consensus       242 tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvl  320 (394)
                      |||+|+++.+|+|||++||+||++|+++|++|||++|| +++++++||+.||++||||.|||||+++||+++|||||||+
T Consensus       252 t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvl  331 (401)
T 2q8k_A          252 TIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVL  331 (401)
T ss_dssp             CEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEEEEEEE
T ss_pred             eEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCCCEEEEEEEEEE
Confidence            99999999999999999999999999999999999999 68899999999999999999999999999999999999999


Q ss_pred             EcCCCceeecCCCC--ccccCCCCCCcHHHHHHHHccccccccCCCCCcCCCC
Q 016183          321 LMPNGSDRITSHTL--QEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKK  371 (394)
Q Consensus       321 vt~~G~~~lT~~~~--~~~~s~~~~~d~e~~~ll~~~~~~~~~~~~~~~~~~~  371 (394)
                      ||++|+++||..|+  ++++|+++|+||||++||++|+++|+|||||++++++
T Consensus       332 vt~~G~eilT~~~~~~~~~~s~~~~~d~e~~~~l~~~~~~~~~~~~~~~~~~~  384 (401)
T 2q8k_A          332 LMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKT  384 (401)
T ss_dssp             EETTEEEECCCCCCCGGGBCCSCCCCCHHHHHHHHSCC---------------
T ss_pred             ECCCCcEEecCCCCCHhhccCCCccCcHHHHHHHhcccccccccccccccccc
Confidence            99999999999887  8999999999999999999999888777777655554
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Back     alignment and structure
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A Back     alignment and structure
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} Back     alignment and structure
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Back     alignment and structure
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Back     alignment and structure
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* Back     alignment and structure
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Back     alignment and structure
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Back     alignment and structure
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Back     alignment and structure
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A Back     alignment and structure
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} Back     alignment and structure
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} Back     alignment and structure
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A Back     alignment and structure
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Back     alignment and structure
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Back     alignment and structure
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Back     alignment and structure
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* Back     alignment and structure
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} Back     alignment and structure
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... Back     alignment and structure
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} Back     alignment and structure
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} Back     alignment and structure
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Back     alignment and structure
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Back     alignment and structure
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Back     alignment and structure
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 Back     alignment and structure
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} Back     alignment and structure
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} Back     alignment and structure
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A Back     alignment and structure
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* Back     alignment and structure
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d1b6aa174 a.4.5.25 (A:375-448) Methionine aminopeptidase, in 4e-23
d1xgsa177 a.4.5.25 (A:195-271) Methionine aminopeptidase, in 4e-23
d1b6aa2295 d.127.1.1 (A:110-374,A:449-478) Methionine aminope 2e-22
d2gg2a1262 d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc 5e-20
d1o0xa_249 d.127.1.1 (A:) Methionine aminopeptidase {Thermoto 3e-15
d1xgsa2218 d.127.1.1 (A:1-194,A:272-295) Methionine aminopept 1e-10
d1qxya_249 d.127.1.1 (A:) Methionine aminopeptidase {Staphylo 4e-07
d2v3za2264 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal 6e-06
d1pv9a2221 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal 9e-05
d1chma2246 d.127.1.1 (A:157-402) Creatinase, catalytic (C-ter 9e-05
>d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} Length = 74 Back     information, alignment and structure

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Methionine aminopeptidase, insert domain
domain: Methionine aminopeptidase, insert domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (223), Expect = 4e-23
 Identities = 15/72 (20%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 237 DEKQTTIYKRAVD-KNYHLKMKASRFIFSEINQKFPIMPFTARALE---EKRARLGLVEC 292
           D+ + + Y +  D  +  +++  ++ + + IN+ F  + F  R L+   E +  + L   
Sbjct: 2   DDMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNL 61

Query: 293 VNHELLQPYPVL 304
            +  ++ PYP L
Sbjct: 62  CDLGIVDPYPPL 73
>d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 77 Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 218 Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Length = 249 Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 221 Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Length = 246 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 100.0
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 100.0
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 100.0
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 100.0
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 100.0
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 100.0
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 100.0
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 100.0
d1b6aa174 Methionine aminopeptidase, insert domain {Human (H 99.77
d1xgsa177 Methionine aminopeptidase, insert domain {Archaeon 99.74
d1chma2246 Creatinase, catalytic (C-terminal) domain {Pseudom 96.36
d1pv9a2221 Aminopeptidase P, C-terminal domain {Archaeon Pyro 96.26
d1qxya_249 Methionine aminopeptidase {Staphylococcus aureus [ 95.8
d1o0xa_249 Methionine aminopeptidase {Thermotoga maritima [Ta 95.32
d2gg2a1262 Methionine aminopeptidase {Escherichia coli [TaxId 95.22
d1xgsa2218 Methionine aminopeptidase {Archaeon Pyrococcus fur 95.14
d2v3za2264 Aminopeptidase P, C-terminal domain {Escherichia c 93.12
d1b6aa2295 Methionine aminopeptidase {Human (Homo sapiens) [T 92.84
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5e-48  Score=360.50  Aligned_cols=248  Identities=21%  Similarity=0.335  Sum_probs=220.2

Q ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCccc
Q 016183           10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLC   89 (394)
Q Consensus        10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~   89 (394)
                      ||.||||+||+.||+|+++++++++.+.+.++||+|+.||++.+.+++.+.++..+..    +..+..++++.+.++..+
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~   76 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFK----GYGGYKYATCVSVNEEVV   76 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESST----TGGGCCCSEEEEETTBCS
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhhhhhhcc----ccccccccccccCccccc
Confidence            6889999999999999999999999999999999999999999999999988765432    334556778889999999


Q ss_pred             CCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHH
Q 016183           90 HFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQ  169 (394)
Q Consensus        90 H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~  169 (394)
                      |+.+.  +++.+++||+|++|+|++++||++|++||+++|+  ++++++++|+++++|++++++.+|||++++||+++++
T Consensus        77 ~~~~~--~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~G~--~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~  152 (249)
T d1o0xa_          77 HGLPL--KEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGE--TDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQ  152 (249)
T ss_dssp             CCCCC--TTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSC--CCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHH
T ss_pred             ceeec--cccccccccceeeecceeecceecccccceeecC--cChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence            98875  4688999999999999999999999999999997  8999999999999999999999999999999999999


Q ss_pred             HHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccc
Q 016183          170 KVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVD  249 (394)
Q Consensus       170 ~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~  249 (394)
                      +++++.|+....+++|||+|+.+|+.| .++..   ..++.+.+|++||||+|||+++.+.+.+....+. |++.     
T Consensus       153 ~~~~~~g~~~~~~~~GHgiG~~~~~~p-~~~~~---~~~~~~~~le~gMv~~iEp~~~~~~~~~~~~e~~-~~~~-----  222 (249)
T d1o0xa_         153 ETVESVGFNVIRDYVGHGVGRELHEDP-QIPNY---GTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDG-WTAV-----  222 (249)
T ss_dssp             HHHHHTTCEECCSSCEEECSSSSSEEE-EECSC---CCTTCSCBCCTTCEEEECCEEESSCCCEEECTTS-SCEE-----
T ss_pred             HHHHhcCCeeecCCcccccccCCCcCC-cccee---ccCCCCccccCCeEEEecceeecCCCceEEccCC-cEEE-----
Confidence            999999998888999999999999988 44322   2334678999999999999999888877666665 4332     


Q ss_pred             cccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceee
Q 016183          250 KNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRI  329 (394)
Q Consensus       250 ~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~l  329 (394)
                                                                              +.+|.+.+|+||||+||++|+++|
T Consensus       223 --------------------------------------------------------~~~g~~g~r~Ed~v~VTe~G~e~L  246 (249)
T d1o0xa_         223 --------------------------------------------------------TVDGSRCAHFEHTILITENGAEIL  246 (249)
T ss_dssp             --------------------------------------------------------ETTCCCEEECBEEEEECSSSEEES
T ss_pred             --------------------------------------------------------eeCCcceEEeceEEEEcCCcCeeC
Confidence                                                                    468889999999999999999999


Q ss_pred             cC
Q 016183          330 TS  331 (394)
Q Consensus       330 T~  331 (394)
                      |.
T Consensus       247 Tk  248 (249)
T d1o0xa_         247 TK  248 (249)
T ss_dssp             SC
T ss_pred             CC
Confidence            95
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure