Citrus Sinensis ID: 016272

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
cccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccEEEEccccccccccccHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEccccccccccccccHHHHHHHHHHHHHccccEEEEEccccccEEEEEcccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEcccccccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHHHHHHccccccccccccEEEcc
ccccHHHHHHHHccccccccccccHHccccccccccccccccccEEEEcccccccHHHHcccHHccccccccccEEEEEEEEccEEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHcccccEEEEccccccEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEcccccHHHHHHHHHHHcccccccccccccEEEEc
MMRPATMIRNACLRNFsqslrvgsaflksgdfcRYTSQAAASLQqdcepsaysddesadhmdwdnlgfgltpadymytmkcsndyfekgrlsrygkielspssgvlnygQGLFEGMKAYRKedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfkeglaplnlyvedefhratpggaggvkaISNYAPVLKAISRAknrgfsdvlYLDSVnkknleevsscnifilkgniistpatsgtilaGITRKSIIEIASdcgfqveeraipvdelleadevfcTGTAVvvapvgsityrgkriefktgaqSVSRELYSTLVGIQtglikdnkgwtvein
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKielspssgvLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKgniistpatsgtILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVvvapvgsityrgkriefktgaqsvsrELYSTLVgiqtglikdnkgwtvein
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
*******IRNACLRNFSQSLRVGSAFLKSGDFCRYTS***********************MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTV***
**************************************************************WDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQA*****************SADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
*MRPATMIRNACLRNFSQSLRVGSA*LKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
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MMRPATMIRNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query392 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.918 0.927 0.722 1e-158
Q9FYA6415 Branched-chain-amino-acid no no 0.969 0.915 0.619 1e-140
Q9M401413 Branched-chain-amino-acid no no 0.857 0.813 0.682 1e-139
Q93Y32384 Branched-chain-amino-acid no no 0.971 0.992 0.614 1e-134
Q9LPM9356 Branched-chain-amino-acid no no 0.859 0.946 0.598 1e-125
Q9LPM8367 Putative branched-chain-a no no 0.859 0.918 0.601 1e-123
Q9LE06354 Methionine aminotransfera no no 0.872 0.966 0.536 1e-113
P39576363 Branched-chain-amino-acid yes no 0.841 0.909 0.405 8e-73
O31461356 Branched-chain-amino-acid no no 0.841 0.926 0.427 6e-70
Q6GJB4358 Probable branched-chain-a yes no 0.834 0.913 0.406 2e-67
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 263/364 (72%), Positives = 317/364 (87%), Gaps = 4/364 (1%)

Query: 32  FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEK 88
           F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +
Sbjct: 26  FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query: 89  GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
           G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct: 85  GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query: 149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
           SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct: 145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query: 209 GNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSV 268
           GNYFKEG+A LNLYVE+E+ RA PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV
Sbjct: 205 GNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSV 264

Query: 269 NKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDEL 328
            KK LEE SSCN+F++KG  ISTPAT+GTIL GITRKS++EIASD G+QV E+A+ VDE+
Sbjct: 265 KKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEV 324

Query: 329 LEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWT 388
           ++ADEVFCTGTAVVVAPVG+ITY+ KR+E+KTG +SV ++L S LVGIQTGLI+DNKGW 
Sbjct: 325 MDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWV 384

Query: 389 VEIN 392
            +IN
Sbjct: 385 TDIN 388
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
225458938387 PREDICTED: branched-chain-amino-acid ami 0.977 0.989 0.724 1e-162
302142143387 unnamed protein product [Vitis vinifera] 0.977 0.989 0.727 1e-161
255537936399 branched-chain amino acid aminotransfera 0.979 0.962 0.703 1e-161
15218409388 branched-chain-amino-acid aminotransfera 0.918 0.927 0.722 1e-156
449450320390 PREDICTED: branched-chain-amino-acid ami 0.928 0.933 0.730 1e-155
288310302389 branched chain amino acid transaminase [ 0.903 0.910 0.744 1e-155
407317193393 mitochodrial branched-chain aminotransfe 0.977 0.974 0.687 1e-154
297843816388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 0.918 0.927 0.711 1e-154
359492522379 PREDICTED: branched-chain-amino-acid ami 0.859 0.889 0.758 1e-150
14280354385 branched-chain amino acid aminotransfera 0.956 0.974 0.664 1e-150
>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 279/385 (72%), Positives = 325/385 (84%), Gaps = 2/385 (0%)

Query: 9   RNACLRNFSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGF 68
           R AC RN  QSLR GS   K      YTS+ A SLQ   E S  SDDE AD +DWDNLGF
Sbjct: 4   RRACFRNLIQSLRTGSTASKLRSSNCYTSRTAPSLQPVVELSPDSDDEYAD-VDWDNLGF 62

Query: 69  GLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127
            L P DYMY  KCS  D FE+G LSRYG IELSPS+GVLNYGQGLFEG KAYR+E+G+L 
Sbjct: 63  SLRPTDYMYITKCSGGDSFEEGHLSRYGNIELSPSAGVLNYGQGLFEGTKAYRRENGRLC 122

Query: 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGS 187
           LFRPDQNAIR+Q GAERMCMPSPSI QF++AVKQTA ANKRW+PPPGKGSLYIRPLL+GS
Sbjct: 123 LFRPDQNAIRMQAGAERMCMPSPSIHQFVEAVKQTAFANKRWIPPPGKGSLYIRPLLMGS 182

Query: 188 GPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPV 247
           GP+LGL PAPE TFL++ASPVGNYFKEGLAPLNL+++DE+HRAT GGAGGVK I+NY+PV
Sbjct: 183 GPVLGLGPAPECTFLIYASPVGNYFKEGLAPLNLFIDDEYHRATRGGAGGVKTITNYSPV 242

Query: 248 LKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSI 307
           LKA++RAK+RGFSDVLYLDSV KKN+EEVSSCN+FI+K N+ISTPAT GTIL G+TRKSI
Sbjct: 243 LKALTRAKSRGFSDVLYLDSVYKKNIEEVSSCNVFIVKDNVISTPATGGTILEGVTRKSI 302

Query: 308 IEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSR 367
           ++IA D G+QV+E+ IPV+E++EADEVFCTGTAV VA VGSITY+GKR+E+K G Q VS+
Sbjct: 303 VDIALDHGYQVKEQCIPVEEVMEADEVFCTGTAVGVAAVGSITYQGKRVEYKMGDQCVSQ 362

Query: 368 ELYSTLVGIQTGLIKDNKGWTVEIN 392
           EL+ST +GIQ G I+D KGW +EI+
Sbjct: 363 ELFSTYMGIQKGDIEDKKGWILEID 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359492522|ref|XP_002285506.2| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|14280354|gb|AAK57535.1| branched-chain amino acid aminotransferase [Capsicum annuum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.918 0.927 0.722 6.8e-143
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.857 0.813 0.682 1.6e-127
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.971 0.992 0.614 3.6e-121
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.859 0.946 0.598 4.5e-114
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.897 0.959 0.585 3.2e-113
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.872 0.966 0.536 2.2e-105
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.854 0.938 0.409 5.8e-66
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.836 0.891 0.395 4.2e-63
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.829 0.883 0.399 3.1e-60
ASPGD|ASPL0000058845394 AN0385 [Emericella nidulans (t 0.829 0.824 0.362 2.5e-49
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1397 (496.8 bits), Expect = 6.8e-143, P = 6.8e-143
 Identities = 263/364 (72%), Positives = 317/364 (87%)

Query:    32 FCRYTSQAAASLQQDCEPSAYS--DDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEK 88
             F +Y +QAA++L+++ +   Y   DD  AD +DWDNLGFGL PADYMY MKCS D  F +
Sbjct:    26 FAKYNAQAASALREERKKPLYQNGDDVYAD-LDWDNLGFGLNPADYMYVMKCSKDGEFTQ 84

Query:    89 GRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMP 148
             G LS YG I+LSPS+GVLNYGQ ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MP
Sbjct:    85 GELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMP 144

Query:   149 SPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPV 208
             SPS+DQF++AVKQTALANKRWVPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPV
Sbjct:   145 SPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPV 204

Query:   209 GNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSV 268
             GNYFKEG+A LNLYVE+E+ RA PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV
Sbjct:   205 GNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSV 264

Query:   269 NKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDEL 328
              KK LEE SSCN+F++KG  ISTPAT+GTIL GITRKS++EIASD G+QV E+A+ VDE+
Sbjct:   265 KKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEV 324

Query:   329 LEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWT 388
             ++ADEVFCTGTAVVVAPVG+ITY+ KR+E+KTG +SV ++L S LVGIQTGLI+DNKGW 
Sbjct:   325 MDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWV 384

Query:   389 VEIN 392
              +IN
Sbjct:   385 TDIN 388
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058845 AN0385 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZJF1ILVE_HELPJ2, ., 6, ., 1, ., 4, 20.39160.84430.9735yesno
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.72250.91830.9278yesno
O26004ILVE_HELPY2, ., 6, ., 1, ., 4, 20.39160.84430.9735yesno
O86505ILVE_STRCO2, ., 6, ., 1, ., 4, 20.37960.86730.9392yesno
Q5EA40BCAT2_BOVIN2, ., 6, ., 1, ., 4, 20.34050.85960.8575yesno
Q5HRJ8ILVE_STAEQ2, ., 6, ., 1, ., 4, 20.40700.83920.9189yesno
Q6GJB4ILVE_STAAR2, ., 6, ., 1, ., 4, 20.40650.83410.9134yesno
Q54N47BCAT_DICDI2, ., 6, ., 1, ., 4, 20.34080.82650.8571yesno
Q5HIC1ILVE_STAAC2, ., 6, ., 1, ., 4, 20.39820.82650.9050yesno
Q6GBT3ILVE_STAAS2, ., 6, ., 1, ., 4, 20.39820.82650.9050yesno
Q8CQ78ILVE_STAES2, ., 6, ., 1, ., 4, 20.40410.83920.9189yesno
O32954ILVE_MYCLE2, ., 6, ., 1, ., 4, 20.39820.83160.8858yesno
P39576ILVE2_BACSU2, ., 6, ., 1, ., 4, 20.40530.84180.9090yesno
P99138ILVE_STAAN2, ., 6, ., 1, ., 4, 20.39820.82650.9050yesno
Q10399ILVE_MYCTU2, ., 6, ., 1, ., 4, 20.39820.83160.8858yesno
P63513ILVE_STAAW2, ., 6, ., 1, ., 4, 20.39820.82650.9050yesno
P63512ILVE_STAAM2, ., 6, ., 1, ., 4, 20.39820.82650.9050yesno
P54687BCAT1_HUMAN2, ., 6, ., 1, ., 4, 20.34200.82650.8393yesno
P54689ILVE_HAEIN2, ., 6, ., 1, ., 4, 20.40170.83920.9591yesno
A0R066ILVE_MYCS22, ., 6, ., 1, ., 4, 20.39580.83670.8913yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.976
4th Layer2.6.1.420.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ATBCAT-2
ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic; Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. ; Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity) (388 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G21400
2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / br [...] (472 aa)
   • •• 0.985
BCDH_BETA1
BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutano [...] (352 aa)
   • •• 0.980
AT3G23940
dehydratase family; dehydratase family; FUNCTIONS IN- catalytic activity, dihydroxy-acid dehydr [...] (608 aa)
•  •••• 0.979
DIN4
DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [...] (358 aa)
   • •• 0.967
MAM1
MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1); 2-isopropylmalate synthase/ methylthioalkylmalate synt [...] (506 aa)
•    •• 0.960
IMS2
IMS2 (2-ISOPROPYLMALATE SYNTHASE 2); 2-isopropylmalate synthase/ methylthioalkylmalate synthase [...] (503 aa)
•    •• 0.943
MAML-4
MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4); 2-isopropylmalate synthase; Encodes an active A [...] (631 aa)
•    •• 0.936
IMS1
IMS1 (2-ISOPROPYLMALATE SYNTHASE 1); 2-isopropylmalate synthase; Encodes an active Arabidopsis [...] (631 aa)
•    •• 0.934
EMB2247
EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / vali [...] (970 aa)
     •• 0.917
EMB2369
EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucl [...] (973 aa)
     •• 0.917

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 0.0
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 0.0
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-180
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-167
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-157
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-129
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-117
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 2e-86
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 5e-77
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 5e-41
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 7e-41
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 7e-37
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 4e-32
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 2e-28
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 7e-26
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 1e-24
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 1e-24
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 1e-17
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 2e-16
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 4e-15
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 9e-15
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 2e-14
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 2e-13
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 6e-13
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 3e-07
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 0.004
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  587 bits (1516), Expect = 0.0
 Identities = 250/377 (66%), Positives = 302/377 (80%), Gaps = 9/377 (2%)

Query: 18  QSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMY 77
            +  V S  + S         A +S       S+Y++      +DWDNLGFGL P DYMY
Sbjct: 34  SNSSVSSNPISSKAISLTRCDAVSS-------SSYTEVTELADIDWDNLGFGLVPTDYMY 86

Query: 78  TMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAI 136
            MKC+ D  F KG L R+G IELSPS+GVLNYGQGLFEG+KAYRKEDG ++LFRP++NAI
Sbjct: 87  IMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAI 146

Query: 137 RLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA 196
           R++ GAERMCMP+P+++QF++AVK+T LANKRWVPPPGKGSLYIRPLL+GSG +LGLAPA
Sbjct: 147 RMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPA 206

Query: 197 PEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKN 256
           PEYTFL++ SPVGNYFKEG+AP+NL VE+EFHRATPGG GGVK I NYA VLKA S AK 
Sbjct: 207 PEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKA 266

Query: 257 RGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGF 316
           +G+SDVLYLD V+KK LEEVSSCNIFI+K N+ISTPA  GTIL GITRKSII++A   GF
Sbjct: 267 KGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTILPGITRKSIIDVARSQGF 326

Query: 317 QVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEF-KTGAQSVSRELYSTLVG 375
           QVEER + VDELLEADEVFCTGTAVVV+PVGSITY+GKR+ + + G  +VS++LY+ L  
Sbjct: 327 QVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYTVLTS 386

Query: 376 IQTGLIKDNKGWTVEIN 392
           +Q GLI+DN  WTVE++
Sbjct: 387 LQMGLIEDNMNWTVELS 403

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 392
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02782403 Branched-chain amino acid aminotransferase 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 99.96
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-91  Score=703.06  Aligned_cols=381  Identities=62%  Similarity=1.006  Sum_probs=354.2

Q ss_pred             HHHh-hhhhhhccccccccCcccccchhhhhcccccCCCCCCCCCCccCCCCCCCCCccccccCceeEEEeccc-eEeCC
Q 016272           12 CLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKG   89 (392)
Q Consensus        12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g   89 (392)
                      .||+ |.|++.+++-.+..+.+.++.+++..++...+........+..+++||++|+||++|||||++++|+++ +|.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~   81 (384)
T PLN02883          2 ALRRCLPQSSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQG   81 (384)
T ss_pred             chhhhccccccchhhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCcccCC
Confidence            4666 788888888788999999999998888754444455577788889999999999999999999998874 89999


Q ss_pred             eeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCC
Q 016272           90 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW  169 (392)
Q Consensus        90 ~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~  169 (392)
                      +|+|+++++|+|++++||||||||||||+|++.||++++||+++|++||++||++|+||.++.++|+++|+++++.|.+|
T Consensus        82 ~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~w  161 (384)
T PLN02883         82 YLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRW  161 (384)
T ss_pred             eEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCCCccEEEEeeccccccCCCCCCCCCccCChHHHHH
Q 016272          170 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLK  249 (392)
Q Consensus       170 vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g~~pv~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~  249 (392)
                      ||+.+.+++||||+++++++.+|+.++.+++|+|+++|+++|+++|++++++.+++.++|++|++++++|++|||+++++
T Consensus       162 vp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~ll  241 (384)
T PLN02883        162 VPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLE  241 (384)
T ss_pred             CCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHHHH
Confidence            99987779999999999988899998889999999999999998888899999988889999999999999999999999


Q ss_pred             HHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECCEEEcCCCCCCcccchHHHHHHHHHHHCCCcEEEEeeCHHHHh
Q 016272          250 AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELL  329 (392)
Q Consensus       250 a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TPpl~~~IL~GITR~~il~la~~~G~~V~Er~i~~~eL~  329 (392)
                      ++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++||+||||++||++|+++|++|+||+|+++||.
T Consensus       242 a~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~eL~  321 (384)
T PLN02883        242 VMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIVTPATSGTILGGITRKSIIEIALDLGYKVEERRVPVEELK  321 (384)
T ss_pred             HHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence            99999999999999999755679999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcceeeEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHHhhccCCCCCCCCeEECC
Q 016272          330 EADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN  392 (392)
Q Consensus       330 ~adEvf~tgTa~~I~PV~~I~~~~~~~~~~~~~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~  392 (392)
                      +|||+|+|||+++|+||++|+++++.+.+..+.||++++|++.|.+||+|+++|++||+++|.
T Consensus       322 ~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~~G~vt~~L~~~l~~iq~G~~~d~~~W~~~~~  384 (384)
T PLN02883        322 EAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLRSILLGIQTGSIQDTKDWVLQIA  384 (384)
T ss_pred             hCCEeeeccChhheEEEEEEeccCceeecccCCCHHHHHHHHHHHHHHcCCCCCCCCCeEeCC
Confidence            999999999999999999999887766433335899999999999999999999999999873

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 4e-69
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 2e-66
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 2e-66
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 4e-65
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 4e-63
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 9e-47
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 5e-46
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 6e-45
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 6e-45
1ekf_A365 Crystallographic Structure Of Human Branched Chain 2e-44
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 2e-44
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 4e-43
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 3e-42
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 4e-26
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 6e-26
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 1e-19
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 2e-18
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 3e-09
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 4e-08
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 4e-08
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 4e-08
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 6e-08
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 2e-07
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 2e-07
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 1e-06
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 4e-06
2y4r_A292 Crystal Structure Of 4-Amino-4-Deoxychorismate Lyas 1e-05
1et0_A269 Crystal Structure Of Aminodeoxychorismate Lyase Fro 9e-05
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 197/337 (58%), Gaps = 6/337 (1%)
Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
           +DW NLGF      + Y     +  ++ G+L+    + +S SS  L+YGQ  FEG+KAYR
Sbjct: 9   LDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYR 68
Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SLY 179
            +DG + LFRP+ NA RLQ  A+R+ MP    D+FIDA KQ   AN+ +VPP G G +LY
Sbjct: 69  TKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLY 128
Query: 180 IRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVK 239
           +RPLL+G G ++G+ PA EY F +FA PVGNYFK GLAP N  ++D++ RA P G G  K
Sbjct: 129 LRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAK 188
Query: 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF-ILKGNIISTPATSGTI 298
              NYA  L     A  R FSDV+YLD      +EEV S N F I K N   TP  S +I
Sbjct: 189 VGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITP-LSPSI 247
Query: 299 LAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIE 357
           L  +T+ S++ +A    G +  E  + VDEL +  E    GTA V++P+G + +      
Sbjct: 248 LPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHV 307
Query: 358 F--KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 392
           F  +T    V+ +LY  L GIQ G +K  +GW  +++
Sbjct: 308 FYSETEVGPVTHKLYDELTGIQFGDVKAPEGWIYKVD 344
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|2Y4R|A Chain A, Crystal Structure Of 4-Amino-4-Deoxychorismate Lyase From Pseudomonas Aeruginosa Length = 292 Back     alignment and structure
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From Escherichia Coli Length = 269 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query392
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-173
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-165
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-162
1iye_A309 Branched-chain amino acid aminotransferase; hexame 2e-50
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 1e-49
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 3e-49
3u0g_A328 Putative branched-chain amino acid aminotransfera; 8e-49
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 3e-47
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 4e-46
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 2e-44
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 6e-42
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 9e-39
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 7e-38
3qqm_A221 MLR3007 protein; structural genomics, joint center 2e-29
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 2e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 392
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 3e-81
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 7e-56
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 7e-30
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 8e-26
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  251 bits (641), Expect = 3e-81
 Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 61  MDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYR 120
              + L FG T  D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++
Sbjct: 21  GPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 80

Query: 121 KEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYI 180
            +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K WVP     SLY+
Sbjct: 81  GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYV 140

Query: 181 RPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-EGLAPLNLYVEDEFHRATPGGAGGVK 239
           RP+L+G+ P LG++        V   PVG YF    + P++L  +  F RA  GG G  K
Sbjct: 141 RPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYK 200

Query: 240 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN----IISTPATS 295
              NY P +     A  RG   VL+L   + +  E  +               + TP  +
Sbjct: 201 LGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLN 260

Query: 296 GTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGS 348
           G IL G+ R+S++++A   G F+V ER I + +LL A       EVF +GTA  V PV  
Sbjct: 261 GVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHR 320

Query: 349 ITYRGKRIEFKTGAQ--SVSRELYSTLVGIQTGLIKDNKGWTVEI 391
           I Y+ + +   T      +       L  IQ G       W   +
Sbjct: 321 ILYKDRNLHIPTMENGPELILRFQKELKEIQYG--IRAHEWMFPV 363
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query392
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=2.8e-80  Score=617.05  Aligned_cols=329  Identities=34%  Similarity=0.590  Sum_probs=308.2

Q ss_pred             CCCCCCCCccccccCceeEEEeccceEeCCeeeeCCCcccCcCCccccccCeEEEEEEEEEecCCeEEeeChHHHHHHHH
Q 016272           60 HMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQ  139 (392)
Q Consensus        60 ~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~YG~gvFEg~kay~~~dG~i~lFr~~~H~~RL~  139 (392)
                      ..+.++|+||++|||||+.++|++|+|.||+|+|++++.|||+|++||||||||||||+|+++||++++|||++|++||.
T Consensus        20 ~~~~~~~~f~~~~~d~m~~~~~~~~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~   99 (363)
T d2a1ha1          20 PGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRML   99 (363)
T ss_dssp             CCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHH
T ss_pred             CCCcccCCCCCcccceEEEEEecCCeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEecCCcccccCCCCeEEEEEEeecCccccCC-Ccc
Q 016272          140 TGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAP  218 (392)
Q Consensus       140 ~Sa~~l~ip~~~~e~l~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lgv~p~~~~~~~v~~~P~~~y~~~g-~~p  218 (392)
                      +||++++||.++.+++.++|.++++.|..|+|..+.+++||||+++++++.+|+.|+..+.++++++|...++..+ .++
T Consensus       100 ~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~  179 (363)
T d2a1ha1         100 RSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTP  179 (363)
T ss_dssp             HHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCC
T ss_pred             HHHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccccccc
Confidence            9999999998899999999999999999999988778999999999988889999988888888888888777654 567


Q ss_pred             EEEEeeccccccCCCCCCCCCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeeCceeEEEEECC-----EEEcCC
Q 016272          219 LNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN-----IISTPA  293 (392)
Q Consensus       219 v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~-----~l~TPp  293 (392)
                      ..+.+.+.+.|.+|.+++..|.++||+++++|..+|+++||||+||||.. +|+|+|++++|+|+++++     +++|||
T Consensus       180 ~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~kdG~~~l~tpp  258 (363)
T d2a1ha1         180 VSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTHEDGVLELVTPP  258 (363)
T ss_dssp             EEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEEEECC
T ss_pred             eeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEecCCCcEEEEecc
Confidence            88888888999999999999999999999999999999999999999864 799999999999999765     599999


Q ss_pred             CCCCcccchHHHHHHHHHHHCC-CcEEEEeeCHHHHhhc------ceeeEEcCcCceEEeEEEEeCCeEEeeCCC-ch-H
Q 016272          294 TSGTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQ-S  364 (392)
Q Consensus       294 l~~~IL~GITR~~il~la~~~G-~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~~~~~~~~~~-~g-~  364 (392)
                      ++.+|||||||++||++|+++| ++|+||+|+++||.+|      ||||+|||+++|+||.+|.++++.+.++++ +| +
T Consensus       259 l~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~~~~i~~g~~g~~  338 (363)
T d2a1ha1         259 LNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPE  338 (363)
T ss_dssp             CSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTH
T ss_pred             ccccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCceEEeCCCCcCHH
Confidence            9999999999999999999997 9999999999999999      999999999999999999999998888877 66 5


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCeEEC
Q 016272          365 VSRELYSTLVGIQTGLIKDNKGWTVEI  391 (392)
Q Consensus       365 vt~~L~~~l~~iq~g~~~d~~~W~~~v  391 (392)
                      +|++|+++|.+||+|+.+|  ||+++|
T Consensus       339 it~~L~~~l~~iq~G~~~~--~W~~~v  363 (363)
T d2a1ha1         339 LILRFQKELKEIQYGIRAH--EWMFPV  363 (363)
T ss_dssp             HHHHHHHHHHHHHTTSSCC--TTEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCC--CCeeEC
Confidence            9999999999999998776  899987
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure