Citrus Sinensis ID: 016348

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-
MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccc
cccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcc
missikatvptatingsdsIFRKrllsptqrslflpplqvdsssksefslsrplhisnvscfepVRVQKSLIKCKayeaeqsqpieREEAKSAAAQKVKIGIYFATWWALNVVFNIYnkkvlnaypypwltsTLSLACGSLMMLISWAtriaeppntdlefWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFllgetfplpvymslvpiIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIfskkgmkgksvsgmNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYnqvsymsldeispltfsigNTMKRISVIVSSIIifhtpvqpiNALGAAIAILGTFLYSQAKQ
missikatvptatingsdsiFRKRLLSPtqrslflpplqvdsssksefslsrplhisnvscfePVRVQKSLIKCKAYEaeqsqpiereEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ
MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFskkgmkgksvsgmNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRisvivssiiiFHTPVQPINalgaaiailgTFLYSQAKQ
*****************************************************LHISNVSCFEPVRVQKSLIKCKAY******************QKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY*****
************************************************************************************************KVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGM****VSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ
MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPL************SRPLHISNVSCFEPVRVQKSLIKCKAYE*****************QKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ
********V**ATINGSDSIFRK********************************************************************SAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK*
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiii
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MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query391 2.2.26 [Sep-21-2011]
Q94B38388 Glucose-6-phosphate/phosp yes no 0.861 0.868 0.817 1e-162
Q9M5A9388 Glucose-6-phosphate/phosp no no 0.948 0.956 0.741 1e-159
Q9LF61417 Xylulose 5-phosphate/phos no no 0.882 0.827 0.497 4e-91
O81514277 Glucose-6-phosphate/phosp no no 0.603 0.851 0.565 1e-76
P11869404 Triose phosphate/phosphat N/A no 0.864 0.836 0.402 9e-66
P52177407 Triose phosphate/phosphat N/A no 0.762 0.732 0.430 1e-65
P21727402 Triose phosphate/phosphat N/A no 0.728 0.708 0.431 1e-65
Q9ZSR7410 Triose phosphate/phosphat no no 0.849 0.809 0.401 2e-65
P49131408 Triose phosphate/phosphat N/A no 0.728 0.698 0.442 3e-65
Q9FTT3417 Triose phosphate/phosphat no no 0.736 0.690 0.419 2e-64
>sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 Back     alignment and function desciption
 Score =  570 bits (1470), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 282/345 (81%), Positives = 316/345 (91%), Gaps = 8/345 (2%)

Query: 49  SLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIER--EEAKSAAAQKVKIGIYFAT 106
           S  +PLHIS+ S F      K  +K +AYEA++S+P++   E     +AQK+KIGIYFAT
Sbjct: 50  SHQKPLHISSASNF------KREVKVEAYEADRSRPLDINIELPDEQSAQKLKIGIYFAT 103

Query: 107 WWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLF 166
           WWALNVVFNIYNKKVLNA+PYPWLTSTLSLACGSLMML+SWATRIA+ P TDLEFWKTLF
Sbjct: 104 WWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLF 163

Query: 167 PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPII 226
           PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF +GETFPLPVY+SL+PII
Sbjct: 164 PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPII 223

Query: 227 GGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLI 286
           GGCALAA+TELNFN+ GFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLS++SL+I
Sbjct: 224 GGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVI 283

Query: 287 LTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFS 346
           LTPF+IAVEGPQ+WAAG++ A+SQ+GP F+WWV AQS+FYHLYNQVSYMSLD+ISPLTFS
Sbjct: 284 LTPFSIAVEGPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFS 343

Query: 347 IGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 391
           IGNTMKRISVIV+SIIIFHTP+QP+NALGAAIAI GTFLYSQAKQ
Sbjct: 344 IGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388
Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for dynamic acclimation of photosynthesis.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=2 SV=1 Back     alignment and function description
>sp|O81514|GPTP1_ARATH Glucose-6-phosphate/phosphate-translocator-like protein 1 OS=Arabidopsis thaliana GN=At4g03950 PE=3 SV=2 Back     alignment and function description
>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Back     alignment and function description
>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 Back     alignment and function description
>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query391
224124274400 predicted protein [Populus trichocarpa] 0.992 0.97 0.830 0.0
255564017392 Glucose-6-phosphate/phosphate translocat 1.0 0.997 0.841 1e-180
224115260366 predicted protein [Populus trichocarpa] 0.933 0.997 0.852 1e-175
357459331401 Glucose-6-phosphate/phosphate-translocat 0.992 0.967 0.792 1e-174
356567384394 PREDICTED: glucose-6-phosphate/phosphate 0.992 0.984 0.798 1e-173
356500360395 PREDICTED: glucose-6-phosphate/phosphate 0.989 0.979 0.790 1e-171
61608932402 putative plastid glucose 6 phosphate/pho 0.989 0.962 0.792 1e-171
2997591401 glucose-6-phosphate/phosphate-translocat 0.994 0.970 0.779 1e-170
449449609396 PREDICTED: glucose-6-phosphate/phosphate 0.994 0.982 0.786 1e-166
356548981391 PREDICTED: glucose-6-phosphate/phosphate 0.987 0.987 0.752 1e-166
>gi|224124274|ref|XP_002319290.1| predicted protein [Populus trichocarpa] gi|222857666|gb|EEE95213.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/389 (83%), Positives = 351/389 (90%), Gaps = 1/389 (0%)

Query: 1   MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLSRPLHISNVS 60
           MI S+K +V T TINGSD+IFR++  S  QRSL LP L  + SSK   S+S+PLH+S V 
Sbjct: 1   MICSVKQSVITPTINGSDTIFRRKNPSAIQRSLILPSLNGNKSSKPVLSMSKPLHVSKVE 60

Query: 61  CFEPVRVQK-SLIKCKAYEAEQSQPIEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNK 119
            F   + QK SLI C AYEA++S+PIE  E KS AA+KVKIGIYFA WWALNVVFNIYNK
Sbjct: 61  SFALSKPQKRSLITCNAYEADRSEPIEAPEVKSEAAKKVKIGIYFAVWWALNVVFNIYNK 120

Query: 120 KVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAA 179
           KVLNA+PYPWLTSTLSLACGSLMM ISWATRIAE P TD EFWKTLFPVAVAHTIGHVAA
Sbjct: 121 KVLNAFPYPWLTSTLSLACGSLMMFISWATRIAETPKTDFEFWKTLFPVAVAHTIGHVAA 180

Query: 180 TVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNF 239
           TVSMSKVAVSFTHIIKSGEPAFSVLVSRF+LGETFP  VY+SLVPIIGGCALAAVTELNF
Sbjct: 181 TVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPPSVYLSLVPIIGGCALAAVTELNF 240

Query: 240 NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQL 299
           NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLS+LSLLILTPFAIAVEGPQ+
Sbjct: 241 NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQM 300

Query: 300 WAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVS 359
           WAAG++TA+S+IGP F+WW+AAQS+FYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVS
Sbjct: 301 WAAGWQTALSEIGPNFVWWIAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVS 360

Query: 360 SIIIFHTPVQPINALGAAIAILGTFLYSQ 388
           SIIIFHTPVQP+NALGAAIA+LGTFLYSQ
Sbjct: 361 SIIIFHTPVQPVNALGAAIAVLGTFLYSQ 389

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255564017|ref|XP_002523008.1| Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor, putative [Ricinus communis] gi|223537820|gb|EEF39438.1| Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224115260|ref|XP_002316985.1| predicted protein [Populus trichocarpa] gi|222860050|gb|EEE97597.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357459331|ref|XP_003599946.1| Glucose-6-phosphate/phosphate-translocator [Medicago truncatula] gi|355488994|gb|AES70197.1| Glucose-6-phosphate/phosphate-translocator [Medicago truncatula] gi|388511431|gb|AFK43777.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356567384|ref|XP_003551900.1| PREDICTED: glucose-6-phosphate/phosphate translocator 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356500360|ref|XP_003519000.1| PREDICTED: glucose-6-phosphate/phosphate translocator 1, chloroplastic [Glycine max] gi|255645584|gb|ACU23286.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|61608932|gb|AAX47109.1| putative plastid glucose 6 phosphate/phosphate translocator [Glycine max] Back     alignment and taxonomy information
>gi|2997591|gb|AAC08525.1| glucose-6-phosphate/phosphate-translocator precursor [Pisum sativum] gi|126506772|gb|ABO14803.1| plastid phosphate translocator [Vicia narbonensis] Back     alignment and taxonomy information
>gi|449449609|ref|XP_004142557.1| PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Cucumis sativus] gi|449485377|ref|XP_004157149.1| PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356548981|ref|XP_003542877.1| PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query391
TAIR|locus:2036778388 GPT2 "glucose-6-phosphate/phos 0.974 0.981 0.663 1.8e-135
TAIR|locus:2160175388 GPT1 "glucose 6-phosphate/phos 0.964 0.971 0.65 4.4e-132
TAIR|locus:2151381417 AT5G17630 "AT5G17630" [Arabido 0.895 0.839 0.454 5.5e-77
TAIR|locus:2136713277 AT4G03950 "AT4G03950" [Arabido 0.391 0.552 0.556 1.3e-66
TAIR|locus:2161423415 APE2 "ACCLIMATION OF PHOTOSYNT 0.634 0.597 0.428 1.8e-55
TAIR|locus:2084203383 PPT2 "phosphoenolpyruvate (pep 0.938 0.958 0.349 2.1e-52
UNIPROTKB|Q84QU8407 PPT2 "Phosphoenolpyruvate/phos 0.774 0.744 0.375 3.5e-52
UNIPROTKB|Q5VQL3393 PPT3 "Phosphoenolpyruvate/phos 0.764 0.760 0.378 1.3e-50
UNIPROTKB|Q69VR7408 PPT1 "Phosphoenolpyruvate/phos 0.762 0.730 0.375 1.7e-50
TAIR|locus:2145944408 CUE1 "CAB UNDEREXPRESSED 1" [A 0.831 0.796 0.346 1.2e-47
TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
 Identities = 264/398 (66%), Positives = 309/398 (77%)

Query:     1 MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLS-----RPLH 55
             M+SSIK +  + +   S S+ R+ +  PT+   F P L + +     F+ +     +PLH
Sbjct:     1 MLSSIKPSSSSFSTAISGSV-RRSI--PTKLK-FSPLLIIKNCHNQSFNANVVSHQKPLH 56

Query:    56 ISNVSCFEPVRVQKSLIKCKAYEAEQSQPIER--EEAKSAAAQKVKIGIYFATWWALNVV 113
             IS+ S F      K  +K +AYEA++S+P++   E     +AQK+KIGIYFATWWALNVV
Sbjct:    57 ISSASNF------KREVKVEAYEADRSRPLDINIELPDEQSAQKLKIGIYFATWWALNVV 110

Query:   114 FNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHT 173
             FNIYNKKVLNA+PYPWLTSTLSLACGSLMML+SWATRIA+ P TDLEFWKTLFPVAVAHT
Sbjct:   111 FNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHT 170

Query:   174 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233
             IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF +GETFPLPVY+SL+PIIGGCALAA
Sbjct:   171 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAA 230

Query:   234 VTELNFNMIGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSILSLLILTPFAIA 293
             +TELNFN+ GFMGAMISNLAFVFRNIF             NYYACLS++SL+ILTPF+IA
Sbjct:   231 ITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIA 290

Query:   294 VEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKR 353
             VEGPQ+WAAG++ A+SQ+GP F+WWV AQS+FYHLYNQVSYMSLD+ISPLTFSIGNTMKR
Sbjct:   291 VEGPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKR 350

Query:   354 XXXXXXXXXXFHTPVQPINXXXXXXXXXXTFLYSQAKQ 391
                       FHTP+QP+N          TFLYSQAKQ
Sbjct:   351 ISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA
GO:0015297 "antiporter activity" evidence=ISS
GO:0015712 "hexose phosphate transport" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=ISS
GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA
GO:0007276 "gamete generation" evidence=IMP
GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA
GO:0015713 "phosphoglycerate transport" evidence=IDA
GO:0015714 "phosphoenolpyruvate transport" evidence=IDA
GO:0015760 "glucose-6-phosphate transport" evidence=IDA
GO:0035436 "triose phosphate transmembrane transport" evidence=IDA
GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA
GO:0009744 "response to sucrose stimulus" evidence=IEP
GO:0009749 "response to glucose stimulus" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009624 "response to nematode" evidence=IEP
GO:0009643 "photosynthetic acclimation" evidence=IMP
GO:0010109 "regulation of photosynthesis" evidence=IMP
GO:0015979 "photosynthesis" evidence=IMP
GO:0080167 "response to karrikin" evidence=IEP
TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136713 AT4G03950 "AT4G03950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M5A9GPT1_ARATHNo assigned EC number0.74160.94880.9561nono
Q94B38GPT2_ARATHNo assigned EC number0.81730.86180.8685yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00130875
hypothetical protein (400 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query391
TIGR00817302 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate 1e-129
PTZ00343350 PTZ00343, PTZ00343, triose or hexose phosphate/pho 3e-76
pfam03151149 pfam03151, TPT, Triose-phosphate Transporter famil 8e-37
COG0697292 COG0697, RhaT, Permeases of the drug/metabolite tr 5e-06
pfam08449303 pfam08449, UAA, UAA transporter family 6e-06
pfam00892126 pfam00892, EamA, EamA-like transporter family 1e-04
>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information 
 Score =  372 bits (957), Expect = e-129
 Identities = 148/294 (50%), Positives = 196/294 (66%), Gaps = 2/294 (0%)

Query: 99  KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTD 158
           + G+ F  W+ LNV FNIYNKK+LN +PYP+  + +SLA GSL  L+SW++ + +     
Sbjct: 2   QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKIS 61

Query: 159 LEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPV 218
               K L PVA+ HTIGHV + VS+SKVAVSFTH IK+ EP FSV++S F LG+ FP  +
Sbjct: 62  SALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL 121

Query: 219 YMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYAC 278
           ++SL+PI+GG ALA+ TEL+FN  GF+ AMISN+ FV RNIFSKK M  KS+   N YA 
Sbjct: 122 WLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAY 181

Query: 279 LSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIW--WVAAQSIFYHLYNQVSYMS 336
           +SI+SL +L+P A   EGP     G+  A+S +    I+   + A   F+H Y QV++M 
Sbjct: 182 ISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241

Query: 337 LDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390
           L  +SPLT S+GN MKR+ VIV SI+ F T + P    G  IAI G FLYS+ K
Sbjct: 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302
>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family Back     alignment and domain information
>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|219846 pfam08449, UAA, UAA transporter family Back     alignment and domain information
>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 391
PTZ00343350 triose or hexose phosphate/phosphate translocator; 100.0
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 100.0
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 100.0
KOG1443349 consensus Predicted integral membrane protein [Fun 99.95
PLN00411358 nodulin MtN21 family protein; Provisional 99.95
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 99.94
PRK11272292 putative DMT superfamily transporter inner membran 99.94
KOG1444314 consensus Nucleotide-sugar transporter VRG4/SQV-7 99.94
PRK11689295 aromatic amino acid exporter; Provisional 99.94
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 99.93
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 99.93
PRK15430296 putative chloramphenical resistance permease RarD; 99.92
PRK10532293 threonine and homoserine efflux system; Provisiona 99.92
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 99.9
TIGR03340281 phn_DUF6 phosphonate utilization associated putati 99.88
COG0697292 RhaT Permeases of the drug/metabolite transporter 99.85
TIGR00688256 rarD rarD protein. This uncharacterized protein is 99.83
KOG1442347 consensus GDP-fucose transporter [Carbohydrate tra 99.8
KOG1581327 consensus UDP-galactose transporter related protei 99.79
COG5070309 VRG4 Nucleotide-sugar transporter [Carbohydrate tr 99.78
KOG3912372 consensus Predicted integral membrane protein [Gen 99.75
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 99.73
KOG1580337 consensus UDP-galactose transporter related protei 99.71
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 99.7
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 99.69
KOG2765416 consensus Predicted membrane protein [Function unk 99.68
PF04142244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 99.68
KOG1582367 consensus UDP-galactose transporter related protei 99.66
KOG1583330 consensus UDP-N-acetylglucosamine transporter [Car 99.62
KOG4510346 consensus Permease of the drug/metabolite transpor 99.6
KOG2234345 consensus Predicted UDP-galactose transporter [Car 99.55
COG2962293 RarD Predicted permeases [General function predict 99.5
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 99.2
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 99.18
KOG2766336 consensus Predicted membrane protein [Function unk 99.16
COG2510140 Predicted membrane protein [Function unknown] 98.98
PF13536113 EmrE: Multidrug resistance efflux transporter 98.92
PF00892126 EamA: EamA-like transporter family; InterPro: IPR0 98.76
KOG4314290 consensus Predicted carbohydrate/phosphate translo 98.75
PF06800269 Sugar_transport: Sugar transport protein; InterPro 98.7
TIGR00950260 2A78 Carboxylate/Amino Acid/Amine Transporter. 98.68
COG2510140 Predicted membrane protein [Function unknown] 98.66
PRK15430 296 putative chloramphenical resistance permease RarD; 98.55
TIGR03340 281 phn_DUF6 phosphonate utilization associated putati 98.48
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.47
PLN00411358 nodulin MtN21 family protein; Provisional 98.46
PRK10532293 threonine and homoserine efflux system; Provisiona 98.44
TIGR00688 256 rarD rarD protein. This uncharacterized protein is 98.4
PRK11689295 aromatic amino acid exporter; Provisional 98.36
PRK11272292 putative DMT superfamily transporter inner membran 98.34
PF05653300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 98.19
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 98.15
PRK11453299 O-acetylserine/cysteine export protein; Provisiona 98.1
TIGR00817302 tpt Tpt phosphate/phosphoenolpyruvate translocator 97.95
PRK13499345 rhamnose-proton symporter; Provisional 97.91
PF03151153 TPT: Triose-phosphate Transporter family; InterPro 97.87
COG0697292 RhaT Permeases of the drug/metabolite transporter 97.84
TIGR00776290 RhaT RhaT L-rhamnose-proton symporter family prote 97.79
PTZ00343350 triose or hexose phosphate/phosphate translocator; 97.72
PRK02971129 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.66
COG5006292 rhtA Threonine/homoserine efflux transporter [Amin 97.65
PRK10452120 multidrug efflux system protein MdtJ; Provisional 97.53
PF13536113 EmrE: Multidrug resistance efflux transporter 97.52
PRK15051111 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl 97.52
PRK11431105 multidrug efflux system protein; Provisional 97.45
PRK09541110 emrE multidrug efflux protein; Reviewed 97.4
PRK10650109 multidrug efflux system protein MdtI; Provisional 97.4
COG2962 293 RarD Predicted permeases [General function predict 97.39
COG2076106 EmrE Membrane transporters of cations and cationic 97.32
KOG2922335 consensus Uncharacterized conserved protein [Funct 97.17
PF08449303 UAA: UAA transporter family; InterPro: IPR013657 T 96.84
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 96.72
PF06800269 Sugar_transport: Sugar transport protein; InterPro 96.61
PF06027334 DUF914: Eukaryotic protein of unknown function (DU 96.56
PF04142 244 Nuc_sug_transp: Nucleotide-sugar transporter; Inte 96.47
PRK09541110 emrE multidrug efflux protein; Reviewed 96.46
COG2076106 EmrE Membrane transporters of cations and cationic 96.42
COG4975288 GlcU Putative glucose uptake permease [Carbohydrat 96.39
PRK11431105 multidrug efflux system protein; Provisional 96.39
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 96.04
PRK10452120 multidrug efflux system protein MdtJ; Provisional 95.94
PRK10650109 multidrug efflux system protein MdtI; Provisional 95.91
TIGR00803222 nst UDP-galactose transporter. NSTs generally appe 95.9
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 95.77
KOG2234 345 consensus Predicted UDP-galactose transporter [Car 94.83
PRK13499 345 rhamnose-proton symporter; Provisional 94.52
KOG4510346 consensus Permease of the drug/metabolite transpor 93.97
PF04657138 DUF606: Protein of unknown function, DUF606; Inter 93.69
KOG1581327 consensus UDP-galactose transporter related protei 93.34
PF05653 300 Mg_trans_NIPA: Magnesium transporter NIPA; InterPr 92.44
PF0089393 Multi_Drug_Res: Small Multidrug Resistance protein 91.98
COG3238150 Uncharacterized protein conserved in bacteria [Fun 91.75
KOG1441316 consensus Glucose-6-phosphate/phosphate and phosph 91.48
COG3238150 Uncharacterized protein conserved in bacteria [Fun 89.14
KOG1580337 consensus UDP-galactose transporter related protei 85.03
KOG4314 290 consensus Predicted carbohydrate/phosphate translo 84.98
PF10639113 UPF0546: Uncharacterised protein family UPF0546; I 84.96
PF07857 254 DUF1632: CEO family (DUF1632); InterPro: IPR012435 83.81
PF06379 344 RhaT: L-rhamnose-proton symport protein (RhaT); In 82.89
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3e-41  Score=330.34  Aligned_cols=294  Identities=40%  Similarity=0.669  Sum_probs=255.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCC--CHHHHHHHHHHHHHHH
Q 016348           96 QKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNT--DLEFWKTLFPVAVAHT  173 (391)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~  173 (391)
                      .++++.++|+.||.+|+..+++||++++++|+|++++.+|++++.+++.+.|..+.++.|+.  ++.+|+.+++.|+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            68889999999999999999999999999999999999999999887766676655444443  3557899999999998


Q ss_pred             HHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHH
Q 016348          174 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLA  253 (391)
Q Consensus       174 ~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~  253 (391)
                      ..+...+.|++++++++++++|+++|+++++++++++|||++++++++++++++|+.++..+|.++++.|++++++|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            88888899999999999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             HHHHHHHHhhcCCCC-----CCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhh---hhhh-hchHHHHHHHHHHH
Q 016348          254 FVFRNIFSKKGMKGK-----SVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKT---AMSQ-IGPQFIWWVAAQSI  324 (391)
Q Consensus       254 ~a~~~v~~k~~~~~~-----~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~---~~~~-~~~~~l~~l~~~~~  324 (391)
                      +++|+++.||.++++     +.+..+.+.++..++.++++|+....|++... ..|..   .... ....+++.++.+++
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~s~l  284 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV-PVWTNYTANMTNYTKGIIIFKIFFSGV  284 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHhhhcccccchHHHHHHHHHHHH
Confidence            999999999987654     35677777777888988999988767764321 11211   0001 11234556777889


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348          325 FYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK  390 (391)
Q Consensus       325 ~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k  390 (391)
                      .++++|...|+++++++|.++++.+++||++++++|+++|||++++.+++|.++++.|+++|++.|
T Consensus       285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999999999999999999999999999875

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>KOG1443 consensus Predicted integral membrane protein [Function unknown] Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG3912 consensus Predicted integral membrane protein [General function prediction only] Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2765 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>KOG2766 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter Back     alignment and domain information
>COG2510 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK15430 putative chloramphenical resistance permease RarD; Provisional Back     alignment and domain information
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PLN00411 nodulin MtN21 family protein; Provisional Back     alignment and domain information
>PRK10532 threonine and homoserine efflux system; Provisional Back     alignment and domain information
>TIGR00688 rarD rarD protein Back     alignment and domain information
>PRK11689 aromatic amino acid exporter; Provisional Back     alignment and domain information
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>PRK11453 O-acetylserine/cysteine export protein; Provisional Back     alignment and domain information
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins Back     alignment and domain information
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein Back     alignment and domain information
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional Back     alignment and domain information
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional Back     alignment and domain information
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PF13536 EmrE: Multidrug resistance efflux transporter Back     alignment and domain information
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>COG2962 RarD Predicted permeases [General function prediction only] Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2922 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine [] Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long Back     alignment and domain information
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function Back     alignment and domain information
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles Back     alignment and domain information
>PRK09541 emrE multidrug efflux protein; Reviewed Back     alignment and domain information
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11431 multidrug efflux system protein; Provisional Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>PRK10452 multidrug efflux system protein MdtJ; Provisional Back     alignment and domain information
>PRK10650 multidrug efflux system protein MdtI; Provisional Back     alignment and domain information
>TIGR00803 nst UDP-galactose transporter Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13499 rhamnose-proton symporter; Provisional Back     alignment and domain information
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only] Back     alignment and domain information
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins Back     alignment and domain information
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only] Back     alignment and domain information
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function Back     alignment and domain information
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query391
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 98.34
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.23
2i68_A137 Protein EMRE; transmembrane protein, small-multidr 98.04
3b5d_A110 Multidrug transporter EMRE; helical membrane prote 97.83
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure
Probab=98.34  E-value=2.4e-06  Score=68.48  Aligned_cols=71  Identities=11%  Similarity=0.175  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHhhhhhcccchHHHHHH-HhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc
Q 016348          166 FPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE  236 (391)
Q Consensus       166 l~~~~~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~  236 (391)
                      +...+++.....+...+++++|.+.+..+ ..+.|+++++++++++||++++.+++|+.++++|+.++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44455677888888999999999999998 899999999999999999999999999999999999876543
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli} Back     alignment and structure
>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00