Citrus Sinensis ID: 016370
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | 2.2.26 [Sep-21-2011] | |||||||
| Q6D2F1 | 673 | Bifunctional polymyxin re | yes | no | 0.848 | 0.491 | 0.367 | 3e-58 | |
| C6DAW5 | 672 | Bifunctional polymyxin re | yes | no | 0.848 | 0.492 | 0.362 | 1e-57 | |
| A8GDR7 | 660 | Bifunctional polymyxin re | yes | no | 0.856 | 0.506 | 0.364 | 4e-57 | |
| A6TF98 | 661 | Bifunctional polymyxin re | yes | no | 0.838 | 0.494 | 0.349 | 6e-57 | |
| B4ETL7 | 660 | Bifunctional polymyxin re | yes | no | 0.861 | 0.509 | 0.351 | 1e-56 | |
| B2VBI9 | 660 | Bifunctional polymyxin re | yes | no | 0.825 | 0.487 | 0.35 | 5e-56 | |
| Q4ZSZ2 | 664 | Bifunctional polymyxin re | yes | no | 0.866 | 0.509 | 0.338 | 7e-56 | |
| B5XTK9 | 661 | Bifunctional polymyxin re | yes | no | 0.838 | 0.494 | 0.347 | 1e-55 | |
| Q48HZ1 | 663 | Bifunctional polymyxin re | yes | no | 0.835 | 0.491 | 0.346 | 1e-55 | |
| A1JPN5 | 687 | Bifunctional polymyxin re | yes | no | 0.828 | 0.470 | 0.359 | 2e-55 |
| >sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=arnA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 190/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 325 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 378
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 379 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 438
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 439 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 483
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 484 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 540
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + +
Sbjct: 541 KRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDR 600
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+DV S +YG+GY D R P + + L W P + + TL Y RT
Sbjct: 601 FPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 659
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) (taxid: 218491) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 0EC: 5 |
| >sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 324 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 377
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 378 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 437
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 482
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 483 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 539
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+ + +
Sbjct: 540 KRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDR 599
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++V S +YG+GY D R P + + L W P + + TL Y RT
Sbjct: 600 FPPFAGFIEVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 658
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Pectobacterium carotovorum subsp. carotovorum (strain PC1) (taxid: 561230) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 222 bits (565), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 191/362 (52%), Gaps = 28/362 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + + L W P ++ + TL Y RT
Sbjct: 594 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLDWQPTIAMQQTVADTLDYFLRTT 653
Query: 376 AE 377
+
Sbjct: 654 VQ 655
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Serratia proteamaculans (strain 568) (taxid: 399741) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|A6TF98|ARNA_KLEP7 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) (taxid: 272620) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis (strain HI4320) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 194/364 (53%), Gaps = 28/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G
Sbjct: 534 KRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+ S +YG+GY D + R P + + L W P +E TL + R
Sbjct: 594 FPPFAGFKKIESSSYYGKGYQDVEHRKPSIKNAERLLDWKPTIETRQTVEETLDFFLRGA 653
Query: 376 AEAI 379
E +
Sbjct: 654 VEEL 657
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Proteus mirabilis (strain HI4320) (taxid: 529507) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|B2VBI9|ARNA_ERWT9 Bifunctional polymyxin resistance protein ArnA OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 192/360 (53%), Gaps = 38/360 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L++ ++ LD+ +D I + G +R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLVDDNFEVFGLDIGSDAIGRFI------GHERFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED+S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDASF----------------DEDSSNLVVGPINKQRWIYSVSKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 476 AYGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGR 532
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYA------ 310
+R F I D IEA+ L+IEN + +G I N+GNP NE +++QLAE + E +
Sbjct: 533 QKRCFTDIHDGIEALFLIIENKQKNCDGQIINIGNPENEASIKQLAEQLLESFERHPLRD 592
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ A E V S +YG+GY D + R P + Q L W P ++ ++ TL +
Sbjct: 593 RFPPFAGFRE----VESSTYYGKGYQDVEHRKPSIRNAKQLLNWQPTIAMDKTIDDTLDF 648
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Erwinia tasmaniensis (strain DSM 17950 / Et1/99) (taxid: 338565) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|Q4ZSZ2|ARNA_PSEU2 Bifunctional polymyxin resistance protein ArnA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQMLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|B5XTK9|ARNA_KLEP3 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella pneumoniae (strain 342) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 192/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I LE + R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLE------SPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + L+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKYDLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Klebsiella pneumoniae (strain 342) (taxid: 507522) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|Q48HZ1|ARNA_PSE14 Bifunctional polymyxin resistance protein ArnA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 193/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S I G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) (taxid: 264730) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
| >sp|A1JPN5|ARNA_YERE8 Bifunctional polymyxin resistance protein ArnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=arnA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFL--------DNPNFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 370 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 475 WAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 532 EQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HE 589
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 590 LRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648
|
Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) (taxid: 393305) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 0 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | ||||||
| 356543530 | 387 | PREDICTED: bifunctional polymyxin resist | 0.989 | 0.997 | 0.917 | 0.0 | |
| 211906520 | 386 | UDP-D-apiose/UPD-D-xylose synthetase [Go | 0.987 | 0.997 | 0.927 | 0.0 | |
| 297849130 | 389 | UDP-D-apiose/UDP-D-xylose synthase 2 [Ar | 0.997 | 1.0 | 0.910 | 0.0 | |
| 18390863 | 389 | UDP-apiose/xylose synthase [Arabidopsis | 0.997 | 1.0 | 0.910 | 0.0 | |
| 225465764 | 388 | PREDICTED: bifunctional polymyxin resist | 0.994 | 1.0 | 0.912 | 0.0 | |
| 21594350 | 389 | putative dTDP-glucose 4-6-dehydratase [A | 0.997 | 1.0 | 0.907 | 0.0 | |
| 297822499 | 389 | UDP-D-apiose/UDP-D-xylose synthase 1 [Ar | 0.997 | 1.0 | 0.902 | 0.0 | |
| 347664493 | 388 | UDP-D-apiose/UPD-D-xylose synthetase [Vi | 0.994 | 1.0 | 0.907 | 0.0 | |
| 15226264 | 389 | UDP-D-apiose/UDP-D-xylose synthase 1 [Ar | 0.997 | 1.0 | 0.897 | 0.0 | |
| 14596185 | 389 | similar to dihydroflavonol reductase [Ar | 0.997 | 1.0 | 0.904 | 0.0 |
| >gi|356543530|ref|XP_003540213.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/386 (91%), Positives = 373/386 (96%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
AS R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ETPH +LALDVYNDKIKHLLEP +
Sbjct: 2 ASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHSVLALDVYNDKIKHLLEPHT 61
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
A RIQFHRLNIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 62 LPWASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPV 121
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED SPCIFGSIEKQRW
Sbjct: 122 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRW 181
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN
Sbjct: 182 SYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 241
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP+NEVTVRQLAE
Sbjct: 242 LLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE 301
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MMT+VY+KVSGEA LE+PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDL
Sbjct: 302 MMTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDL 361
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQHRTYAEA+K+ +AKPVAS
Sbjct: 362 LESTLTYQHRTYAEAVKKVIAKPVAS 387
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906520|gb|ACJ11753.1| UDP-D-apiose/UPD-D-xylose synthetase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/385 (92%), Positives = 371/385 (96%)
Query: 5 SVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ 64
+ R DLDGRPIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLEP+S
Sbjct: 2 ATRTDLDGRPIKPLTICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDSL 61
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
A RIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 62 PWAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 121
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED SPCIFGSIEKQRWS
Sbjct: 122 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDTSPCIFGSIEKQRWS 181
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YACAKQLIERLIYAEGAE GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL
Sbjct: 182 YACAKQLIERLIYAEGAETGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 241
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
LRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQLAEM
Sbjct: 242 LRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPDRANGHIFNVGNPNNEVTVRQLAEM 301
Query: 305 MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
MT+VYAKVSGE LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLL
Sbjct: 302 MTKVYAKVSGETVLESPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 361
Query: 365 ESTLTYQHRTYAEAIKQAVAKPVAS 389
ESTLTYQHRTYAEAIK+++AKP AS
Sbjct: 362 ESTLTYQHRTYAEAIKKSIAKPSAS 386
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297849130|ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp. lyrata] gi|297338288|gb|EFH68705.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/389 (91%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGAGRLDLDGKPIKPITICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18390863|ref|NP_563807.1| UDP-apiose/xylose synthase [Arabidopsis thaliana] gi|6579211|gb|AAF18254.1|AC011438_16 T23G18.6 [Arabidopsis thaliana] gi|24899785|gb|AAN65107.1| similar to dihydroflavonol reductase [Arabidopsis thaliana] gi|332190139|gb|AEE28260.1| UDP-apiose/xylose synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/389 (91%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465764|ref|XP_002266630.1| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis vinifera] gi|296087442|emb|CBI34031.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 375/389 (96%), Gaps = 1/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK++ ET HK+LA+DVYNDKI+HLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYNDKIRHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + +DRIQFHR+NIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PAAHPWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY+LKEDASPCIFGSIEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDASPCIFGSIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 239
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGGQSQRTF+YIKDAIEAVLLMI+NP RANGHIFNVGNP+NE TV+Q
Sbjct: 240 SNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEATVKQ 299
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE +LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 300 LAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSL 359
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEAIKQA+AKPVAS
Sbjct: 360 WDLLESTLTYQHRTYAEAIKQAIAKPVAS 388
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21594350|gb|AAM65998.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/389 (90%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A++ PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIDSPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297822499|ref|XP_002879132.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis lyrata subsp. lyrata] gi|297324971|gb|EFH55391.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/389 (90%), Positives = 374/389 (96%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + R+DLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGANRVDLDGKPIKPITICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ + RIQFHR+NIKHDSRLEGLIKMADL INLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVEWSGRIQFHRINIKHDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR+DPA+YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLREDPAFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH+TYAEA+K+A +KPVAS
Sbjct: 361 WDLLESTLTYQHKTYAEAVKKATSKPVAS 389
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|347664493|gb|AEP17007.1| UDP-D-apiose/UPD-D-xylose synthetase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/389 (90%), Positives = 374/389 (96%), Gaps = 1/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK+ ET HK+LA+DVYNDKI+HLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLTAETMHKVLAVDVYNDKIRHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + + +DRIQFHR+NIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PATHSWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY+LKEDASPCIFGSIEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDASPCIFGSIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 239
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMI+NP RANGHIFNVGNP+NE TV+Q
Sbjct: 240 SNNLLRHEPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEATVKQ 299
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE +LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 300 LAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSL 359
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEAIK+A+AKPVAS
Sbjct: 360 WDLLESTLTYQHRTYAEAIKEAIAKPVAS 388
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15226264|ref|NP_180353.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis thaliana] gi|13605497|gb|AAK32742.1|AF361574_1 At2g27860/F15K20.4 [Arabidopsis thaliana] gi|3860247|gb|AAC73015.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] gi|21555529|gb|AAM63878.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana] gi|24111293|gb|AAN46770.1| At2g27860/F15K20.4 [Arabidopsis thaliana] gi|38231566|gb|AAR14687.1| UDP-D-apiose/UDP-D-xylose synthase [Arabidopsis thaliana] gi|52354277|gb|AAU44459.1| hypothetical protein AT2G27860 [Arabidopsis thaliana] gi|60547725|gb|AAX23826.1| hypothetical protein At2g27860 [Arabidopsis thaliana] gi|330252960|gb|AEC08054.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/389 (89%), Positives = 372/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + R+DLDG+PI+P+TICMIGAGGFIGSHLCEK+L ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ + RIQFHR+NIKHDSRLEGL+KMADL INLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEA+K+A +KPVAS
Sbjct: 361 WDLLESTLTYQHRTYAEAVKKATSKPVAS 389
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|14596185|gb|AAK68820.1| similar to dihydroflavonol reductase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/389 (90%), Positives = 371/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLG PKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGCTPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | ||||||
| TAIR|locus:2200018 | 389 | AXS2 "UDP-D-apiose/UDP-D-xylos | 0.997 | 1.0 | 0.910 | 7e-196 | |
| TAIR|locus:2041974 | 389 | AXS1 "UDP-D-apiose/UDP-D-xylos | 0.997 | 1.0 | 0.897 | 2.7e-194 | |
| UNIPROTKB|P77398 | 660 | arnA "fused UDP-L-Ara4N formyl | 0.710 | 0.419 | 0.356 | 9.1e-45 | |
| UNIPROTKB|Q4KC82 | 668 | arnA "Bifunctional polymyxin r | 0.858 | 0.501 | 0.305 | 1.1e-34 | |
| TIGR_CMR|BA_0507 | 321 | BA_0507 "NAD-dependent epimera | 0.453 | 0.551 | 0.323 | 1.3e-25 | |
| TIGR_CMR|GSU_1815 | 311 | GSU_1815 "NAD-dependent epimer | 0.294 | 0.369 | 0.346 | 4e-17 | |
| UNIPROTKB|B3KV61 | 363 | UXS1 "UDP-glucuronate decarbox | 0.430 | 0.462 | 0.248 | 2.6e-14 | |
| UNIPROTKB|F1PU61 | 414 | UXS1 "Uncharacterized protein" | 0.430 | 0.405 | 0.248 | 4.1e-14 | |
| UNIPROTKB|Q8NBZ7 | 420 | UXS1 "UDP-glucuronic acid deca | 0.430 | 0.4 | 0.248 | 4.3e-14 | |
| MGI|MGI:1915133 | 420 | Uxs1 "UDP-glucuronate decarbox | 0.430 | 0.4 | 0.248 | 4.3e-14 |
| TAIR|locus:2200018 AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1897 (672.8 bits), Expect = 7.0e-196, P = 7.0e-196
Identities = 354/389 (91%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
|
|
| TAIR|locus:2041974 AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 349/389 (89%), Positives = 372/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + R+DLDG+PI+P+TICMIGAGGFIGSHLCEK+L ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ + RIQFHR+NIKHDSRLEGL+KMADL INLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEA+K+A +KPVAS
Sbjct: 361 WDLLESTLTYQHRTYAEAVKKATSKPVAS 389
|
|
| UNIPROTKB|P77398 arnA "fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4''-decarboxylase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 107/300 (35%), Positives = 162/300 (54%)
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D Y+ ED S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------MCSDK-------YF--DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 477 YGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 534 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH 593
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + ++ L W PK + + ++ TL + RT
Sbjct: 594 FP-PFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652
|
|
| UNIPROTKB|Q4KC82 arnA "Bifunctional polymyxin resistance protein ArnA" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 116/380 (30%), Positives = 183/380 (48%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ +R GR + + ++G GFIG+HL E++L + + + LD+ +D I+ L
Sbjct: 304 GSLLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDKYDVYGLDIGSDAIERL---R 360
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
S ++ ++I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 361 SHPNFHFVEGD-ISI-HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLK 418
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+V+YC + NKR+I ST EVYG + QD + ED S I G I KQR
Sbjct: 419 LVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDTSNLIVGPINKQR 463
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID-GPSEGVPRVLA--- 238
W Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D + G S + +++
Sbjct: 464 WIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLV 522
Query: 239 ------CFSNNLLRRQPLKLVDGGQSQRTFIYIK-DAIEAVLLMIENPARANGHIFNVGN 291
F +R + DG ++ + + D ++ I NP I +G
Sbjct: 523 EGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDN-EASIRQLG- 580
Query: 292 PHNEVTVRQL-AEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQ 350
E +RQ A + + +G DV SK FYG GY D + R P + +
Sbjct: 581 ---EELLRQFEAHPLRGNFPPFAGFR-------DVESKAFYGAGYQDVEHRKPSIDNAKR 630
Query: 351 QLGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 631 LLNWEPTVEMSETIGNTLDF 650
|
|
| TIGR_CMR|BA_0507 BA_0507 "NAD-dependent epimerase/dehydratase family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 224 (83.9 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 64/198 (32%), Positives = 102/198 (51%)
Query: 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233
++G+ K RWSYA K L E L E GL TIVR FN GPR DGP GV
Sbjct: 137 LYGATSKIRWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIYGPRAK-----DGPYAGV 190
Query: 234 -PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292
PR F + L+ + + + G+ R F Y+ DA+EA + ++ + NG I N+G+
Sbjct: 191 IPR----FISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDE--KVNGEIINIGS- 243
Query: 293 HNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
NE +++++AE V K++ ++ V V +E Y G+++ R PD+T + +
Sbjct: 244 ENEKSIKEVAE----VIKKLTDSSS---KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLV 296
Query: 353 GWNPKTSLWDLLESTLTY 370
+ K + D L+ T+ +
Sbjct: 297 QFQAKVTWEDGLKETIKW 314
|
|
| TIGR_CMR|GSU_1815 GSU_1815 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 162 (62.1 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 44/127 (34%), Positives = 64/127 (50%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ-FHRLN-I 77
I + G GFIGSHLCE+ LLE H +L LD + S+ DR+ FHR I
Sbjct: 3 ILVTGGAGFIGSHLCER-LLEQGHDVLCLDNFFTG--------SKRNIDRLMDFHRFEVI 53
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +E ++ D NLA +P Y P+ TI ++ + + ++ R++
Sbjct: 54 RHDI-IEPILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQA 112
Query: 138 STCEVYG 144
ST EVYG
Sbjct: 113 STSEVYG 119
|
|
| UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 134 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 189
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 190 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 240
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 241 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 296
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 297 AQDDPQKRK 305
|
|
| UNIPROTKB|F1PU61 UXS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 185 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 240
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 241 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 291
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 292 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 347
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 348 AQDDPQKRK 356
|
|
| UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
|
|
| MGI|MGI:1915133 Uxs1 "UDP-glucuronate decarboxylase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh2_kg.1__835__AT1G08200.1 | annotation not avaliable (389 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 390 | |||
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 0.0 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-122 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 3e-99 | |
| PRK08125 | 660 | PRK08125, PRK08125, bifunctional UDP-glucuronic ac | 3e-73 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 4e-48 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-44 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 1e-41 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-36 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 2e-27 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 3e-27 | |
| PLN02206 | 442 | PLN02206, PLN02206, UDP-glucuronate decarboxylase | 4e-25 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 3e-23 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 3e-19 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 5e-19 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 3e-16 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 2e-15 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 3e-15 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 4e-14 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 8e-14 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 2e-13 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 8e-13 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 3e-12 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 2e-11 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 9e-11 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 2e-10 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 1e-09 | |
| cd05255 | 382 | cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth | 2e-09 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 4e-09 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 6e-09 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 2e-08 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 3e-08 | |
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 4e-08 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 3e-07 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 5e-07 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 6e-07 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 8e-07 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 4e-06 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 4e-06 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 5e-06 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 7e-06 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 7e-06 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 8e-06 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 2e-05 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 3e-05 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 3e-05 | |
| PLN02572 | 442 | PLN02572, PLN02572, UDP-sulfoquinovose synthase | 1e-04 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 3e-04 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 0.001 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 0.001 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 0.002 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 842 bits (2177), Expect = 0.0
Identities = 356/386 (92%), Positives = 375/386 (97%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
+ RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLEP++
Sbjct: 1 MAARLDLDGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDT 60
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
+ RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 61 VPWSGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 120
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
VKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDPA+YVLKED SPCIFGSIEKQRW
Sbjct: 121 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRW 180
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN
Sbjct: 181 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 240
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLRR+PLKLVDGGQSQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP+NEVTVRQLAE
Sbjct: 241 LLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE 300
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MMTEVYAKVSGE ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDL
Sbjct: 301 MMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDL 360
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQH+TYAEAIK+A++KP AS
Sbjct: 361 LESTLTYQHKTYAEAIKKAMSKPTAS 386
|
Length = 386 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 356 bits (915), Expect = e-122
Identities = 113/360 (31%), Positives = 156/360 (43%), Gaps = 48/360 (13%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ + GA GFIGSHL E+ LL H++ ALD+YN L A +FH ++
Sbjct: 1 NVLVTGADGFIGSHLTER-LLREGHEVRALDIYNSFNSWGLLDN----AVHDRFHFISGD 55
Query: 79 HDSRLEG--LIKMADLTINLAAICTPADYNTRPLDTIYSN-FIDALPVVKYCSENNKRLI 135
E L+K D+ +LAA+ T PL + +N F + C KR++
Sbjct: 56 VRDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVV 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
H ST EVYG + +D PL I K R Y+ +KQ +RL
Sbjct: 116 HTSTSEVYGTAQDVPIDEDHPLLY------------------INKPRSPYSASKQGADRL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
Y+ G GL TI+RPFN GPR I R + NL P + +
Sbjct: 158 AYSYGRSFGLPVTIIRPFNTYGPRQSARAVIPTI--ISQRAIGQRLINLGDGSPTRDFNF 215
Query: 256 G-QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
+ R FI I DAIEAV +I N +G ++GNP E+ V +L EM+ VY
Sbjct: 216 VKDTARGFIDILDAIEAVGEIINNG---SGEEISIGNPAVELIVEELGEMVLIVYDDHRE 272
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
Y GY + ++RIPD+ + LGW PK SL D L T+ +
Sbjct: 273 ----------------YRPGYSEVERRIPDIRKAKRLLGWEPKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 298 bits (765), Expect = 3e-99
Identities = 137/367 (37%), Positives = 200/367 (54%), Gaps = 30/367 (8%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K V I +G GFIG HL ++IL T ++ +D+ D++ L+ R+ F
Sbjct: 2 KKVLI--LGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHP------RMHFFEG 53
Query: 76 NIKHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L
Sbjct: 54 DITINKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHL 113
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + +ASP ++G I K RW YAC+KQL++R
Sbjct: 114 VFPSTSEVYGM---------CPDEE------FDPEASPLVYGPINKPRWIYACSKQLMDR 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R +P+ LVD
Sbjct: 159 VIWAYGMEEGLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGEPISLVD 215
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GG +R F I D I+A++ +IEN A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 GGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP 275
Query: 314 G--EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
E+A + V+ +S +YG+GY D R+P + Q+LGW PKT++ D L
Sbjct: 276 EYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAY 335
Query: 372 HRTYAEA 378
AEA
Sbjct: 336 RGHVAEA 342
|
Length = 347 |
| >gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Score = 240 bits (614), Expect = 3e-73
Identities = 131/363 (36%), Positives = 193/363 (53%), Gaps = 42/363 (11%)
Query: 23 IGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDS 81
+G GFIG+HL E++L + +++ LD+ +D I L G R F +I H
Sbjct: 321 LGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL------GHPRFHFVEGDISIHSE 374
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
+E IK D+ + L AI TP +Y PL +F + L +++YC + NKR+I ST E
Sbjct: 375 WIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSE 434
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYG + D + ED S I G I KQRW Y+ +KQL++R+I+A G
Sbjct: 435 VYG------------MCTDKYF---DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGE 479
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
+ GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+ +R
Sbjct: 480 KEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRC 536
Query: 262 FIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--------- 311
F I+D IEA+ +IEN R +G I N+GNP NE ++R+LAEM+ + K
Sbjct: 537 FTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPP 596
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+G V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 597 FAG-------FRVVESSSYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
|
Length = 660 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 4e-48
Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 44/274 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL + LL+ ++++ L RI+FH ++
Sbjct: 1 ILVTGGTGFIGSHLVRR-LLQEGYEVIVLGRRR--------RSESLNTGRIRFHEGDLTD 51
Query: 80 DSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
LE L+ D I+LAA P D I +N + L +++ KR +
Sbjct: 52 PDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVF 111
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ EVYG + +D+PL SP YA AK ERL+
Sbjct: 112 ASSSEVYGDVADPPITEDTPLG----------PLSP------------YAAAKLAAERLV 149
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A GL I+R FN GP P V V+ +L +P+ L+ G
Sbjct: 150 EAYARAYGLRAVILRLFNVYGPGN--------PDPFVTHVIPALIRRILEGKPILLLGDG 201
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
+R F+Y+ D A+LL +E+P G I+N+G
Sbjct: 202 TQRRDFLYVDDVARAILLALEHP--DGGEIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 1e-44
Identities = 97/351 (27%), Positives = 143/351 (40%), Gaps = 52/351 (14%)
Query: 23 IGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82
G GFIGSHL E+ LL H + LD D + LL D D
Sbjct: 6 TGGAGFIGSHLVER-LLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTD-------RDLV 57
Query: 83 LEGLIKMADLTINLAAI-CTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC 140
E + D I+LAA P + P + + N L +++ KR + S+
Sbjct: 58 DELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSV 117
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
V DP + ED P + Y +K E+L+ A
Sbjct: 118 SVVY--------------GDPPPLPIDEDLGP------PRPLNPYGVSKLAAEQLLRAYA 157
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ- 259
GL I+RPFN GP D S V++ F LL+ +P+ ++ G SQ
Sbjct: 158 RLYGLPVVILRPFNVYGPGDKP----DLSS----GVVSAFIRQLLKGEPIIVIGGDGSQT 209
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F+Y+ D +A+LL +ENP +G +FN+G+ E+TVR+LAE + E +
Sbjct: 210 RDFVYVDDVADALLLALENP---DGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI 266
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G D + ++ D++ LGW PK SL + L TL +
Sbjct: 267 PL----------GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEW 307
|
Length = 314 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 1e-41
Identities = 99/358 (27%), Positives = 158/358 (44%), Gaps = 62/358 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
I + G GF+GSHLC++ LLE H+++ +D + I+HL+ G +F
Sbjct: 2 RILITGGAGFLGSHLCDR-LLEDGHEVICVDNFFTGRKRNIEHLI------GHPNFEF-- 52
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD E L D +LA +P Y P+ T+ +N + L ++ R+
Sbjct: 53 --IRHDVT-EPLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARV 109
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLI 192
+ ST EVYG DP + E +G++ R Y K++
Sbjct: 110 LLASTSEVYG---------------DPEVHPQPES----YWGNVNPIGPRSCYDEGKRVA 150
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L A ++G++ I R FN GPRM G RV++ F LR +P+ +
Sbjct: 151 ETLCMAYHRQHGVDVRIARIFNTYGPRMHPNDG---------RVVSNFIVQALRGEPITV 201
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D +E ++ ++ + G N+GNP E T+ +LAE++ ++
Sbjct: 202 YGDGTQTRSFQYVSDLVEGLIRLMNSDYF--GGPVNLGNP-EEFTILELAELVKKLTGSK 258
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S L P DD +R PD++ + LGW PK L + L T+ Y
Sbjct: 259 SEIVFLPLPE-------------DDPKRRRPDISKAKELLGWEPKVPLEEGLRRTIEY 303
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 3e-36
Identities = 61/272 (22%), Positives = 100/272 (36%), Gaps = 73/272 (26%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL + LLE H+++ +D
Sbjct: 1 ILVTGGAGFIGSHLVRR-LLERGHEVVVID------------------------------ 29
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFS 138
D+ ++LAA+ P + +N + L +++ + KR ++ S
Sbjct: 30 ---------RLDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYAS 80
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ VYG P +E+ P + Y +K E L+ +
Sbjct: 81 SASVYG---------------SPEGLPEEEETPP-------RPLSPYGVSKLAAEHLLRS 118
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G GL I+R N GP + V+ F L +PL + GG
Sbjct: 119 YGESYGLPVVILRLANVYGPG---------QRPRLDGVVNDFIRRALEGKPLTVFGGGNQ 169
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
R FI++ D + A+L +ENP G ++N+G
Sbjct: 170 TRDFIHVDDVVRAILHALENPLEGGG-VYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 2e-27
Identities = 100/352 (28%), Positives = 159/352 (45%), Gaps = 65/352 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL +K++ I+ + + + ++L+ G R +
Sbjct: 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH---LFGNPRFEL--- 172
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 173 -IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFL 230
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + KE +G++ +R Y K+ E
Sbjct: 231 LTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGERSCYDEGKRTAE 271
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F +R+QP+
Sbjct: 272 TLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQTIRKQPMT 320
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D ++ ++ ++E H+ FN+GNP E T+ +LAE++ E
Sbjct: 321 VYGDGKQTRSFQYVSDLVDGLVALMEGE-----HVGPFNLGNP-GEFTMLELAEVVKE-- 372
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D S+ EF DD KR PD++ + L W PK SL
Sbjct: 373 ------------TIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISL 412
|
Length = 436 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 3e-27
Identities = 94/350 (26%), Positives = 141/350 (40%), Gaps = 59/350 (16%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
G GFIGSHL E+ LLE H+++ LD + K L ++F +I+ D +
Sbjct: 6 GGAGFIGSHLVER-LLERGHEVIVLDNLSTGKKENLPE----VKPNVKFIEGDIRDDELV 60
Query: 84 EGLIKMADLTINLAAICTPADYNTR----PLDTIYSNFIDALPVVKYCSENN-KRLIHFS 138
E + D + AA A R P+ N + L +++ + KR ++ S
Sbjct: 61 EFAFEGVDYVFHQAAQ---AS-VPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYAS 116
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ VYG LPKD +P SP YA +K E
Sbjct: 117 SSSVYGDPPY--LPKDEDHPPNPL--------SP------------YAVSKYAGELYCQV 154
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GL +R FN GPR D P+ G V+ F L+ +P + G+
Sbjct: 155 FARLYGLPTVSLRYFNVYGPRQD-------PNGGYAAVIPIFIERALKGEPPTIYGDGEQ 207
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y++D +EA LL A A G ++N+G +V +LAE++ E+ K E
Sbjct: 208 TRDFTYVEDVVEANLLAAT--AGAGGEVYNIGTGK-RTSVNELAELIREILGK-ELEPVY 263
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P G D + D++ + LGW PK S + L T+
Sbjct: 264 APPR----------PG--DVRHSLADISKAKKLLGWEPKVSFEEGLRLTV 301
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 4e-25
Identities = 96/350 (27%), Positives = 155/350 (44%), Gaps = 61/350 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + + + G GF+GSHL ++++ I+ + + + ++++ +
Sbjct: 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH---HFSNPNFEL--- 171
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 172 -IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 229
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PL Q P + +P R Y K+ E L
Sbjct: 230 LTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKRTAETL 272
Query: 196 I--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
Y GA +E I R FN GPRM G RV++ F LR++PL +
Sbjct: 273 TMDYHRGA--NVEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLTVY 321
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G+ R+F ++ D +E ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 322 GDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQE---- 371
Query: 312 VSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D ++K EF DD KR PD+T + LGW PK SL
Sbjct: 372 ----------TIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSL 411
|
Length = 442 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 3e-23
Identities = 86/351 (24%), Positives = 144/351 (41%), Gaps = 63/351 (17%)
Query: 23 IGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82
+G GFIGSHL + LLE ++ D P + + + + + ++ +
Sbjct: 5 VGGNGFIGSHLVDA-LLEEGPQVRVFDRS--------IPPYELPLGGVDYIKGDYENRAD 55
Query: 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC-SENNKRLIHFSTC- 140
LE + D I+LA+ PA N P+ I +N + +++ C + ++I S+
Sbjct: 56 LESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASSGG 115
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
VYG + + P P SY +K IE+ +
Sbjct: 116 TVYGVPEQLPISESDPTL-------------PIS---------SYGISKLAIEKYLRLYQ 153
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
GL++T++R N GP G G V+ N +LR +P+++ G+S R
Sbjct: 154 YLYGLDYTVLRISNPYGPGQR-PDGKQG-------VIPIALNKILRGEPIEIWGDGESIR 205
Query: 261 TFIYIKDAIEAVLLMIENPARANGH--IFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
+IYI D +EA L+ + R+ G +FN+G+ ++ +L A
Sbjct: 206 DYIYIDDLVEA-LMAL---LRSKGLEEVFNIGSGIG-YSLAEL--------------IAE 246
Query: 319 EEPTVDVSSKEFYGEG-YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
E S + Y D K + D++ +LGW+PK SL D LE T
Sbjct: 247 IEKVTGRSVQVIYTPARTTDVPKIVLDISRARAELGWSPKISLEDGLEKTW 297
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 3e-19
Identities = 88/374 (23%), Positives = 144/374 (38%), Gaps = 61/374 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ GAGGFIGSHL E+ L H + D +H+ +P D +FH ++++
Sbjct: 2 RALVTGAGGFIGSHLAER-LKAEGHYVRGAD--WKSPEHMTQPT-----DDDEFHLVDLR 53
Query: 79 HDSRLEGLIKMA---DLTINLAAICTPADYNTR-PLDTIYSNFIDALPVVKYCSENN-KR 133
+E +K D +LAA Y +Y+N + +++ N +R
Sbjct: 54 ---EMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVER 110
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
+ S+ VY + LR++ A+ +DA Y K E
Sbjct: 111 FLFASSACVYPEFK-QLETTVVRLREEDAWPAEPQDA--------------YGWEKLATE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
RL + G+E IVR N GPR + DG E P + ++
Sbjct: 156 RLCQHYNEDYGIETRIVRFHNIYGPRGTW----DGGREKAPAAMCRKVATAKDGDRFEIW 211
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF----NVGNPHNEVTVRQLAEMMTEVY 309
G R+F YI D +E + ++E F N+G+ V++ +LAEM+
Sbjct: 212 GDGLQTRSFTYIDDCVEGLRRLME-------SDFGEPVNLGS-DEMVSMNELAEMVLSFS 263
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
K + + +G R D T++ ++LGW P T L + L T
Sbjct: 264 GK-------PLEIIHHTPGP---QG---VRGRNSDNTLLKEELGWEPNTPLEEGLRITYF 310
Query: 370 -YQHRTYAEAIKQA 382
+ + AE K +
Sbjct: 311 WIKEQIEAEKAKTS 324
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 5e-19
Identities = 76/301 (25%), Positives = 119/301 (39%), Gaps = 62/301 (20%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++ LLE ++++ +D N E + +F + ++
Sbjct: 2 ILVTGGAGFIGSHLVDR-LLEEGNEVVVVD--NLSSGRRENIEPEFENKAFRFVKRDLL- 57
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTI---YSNFIDALPVVKYCSENN-KRLI 135
D+ + K D +LAA D D N + V++ N KR++
Sbjct: 58 DTADKVAKKDGDTVFHLAA---NPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIV 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
S+ VYG + ED P Y +K E L
Sbjct: 115 FASSSTVYG---------------EAKVIPTPEDYPP-------LPISVYGASKLAAEAL 152
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRM------DFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
I A G + I R N +GPR DFI N L+R P
Sbjct: 153 ISAYAHLFGFQAWIFRFANIVGPRSTHGVIYDFI-------------------NKLKRNP 193
Query: 250 LKL-VDGGQSQR-TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+L V G QR +++Y+ D ++A+LL E +IFN+GN ++V ++AE++ E
Sbjct: 194 NELEVLGDGRQRKSYLYVSDCVDAMLLAWEKST-EGVNIFNLGNDDT-ISVNEIAEIVIE 251
Query: 308 V 308
Sbjct: 252 E 252
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 3e-16
Identities = 101/369 (27%), Positives = 157/369 (42%), Gaps = 84/369 (22%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPH-KILALD--VYNDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGS+ +L + P KI+ LD Y +++L E + + R +F +
Sbjct: 2 KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENL---EDVSSSPRYRFVKG 58
Query: 76 NIKHDSRLEGLIKM--ADLTINLAAICTPADYN-TRPLDTIYSNFI------DALPVVKY 126
+I ++ L + D I+ AA + D + + P I +N + +A KY
Sbjct: 59 DICDAELVDRLFEEEKIDAVIHFAAE-SHVDRSISDPEPFIRTNVLGTYTLLEA--ARKY 115
Query: 127 CSENNKRLIHFSTCEVYG--KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
KR +H ST EVYG G F + SPL P SP
Sbjct: 116 ---GVKRFVHISTDEVYGDLLDDGEF-TETSPLA--PT--------SP------------ 149
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +K + L+ A GL I R N GP F P + +P F N
Sbjct: 150 YSASKAAADLLVRAYHRTYGLPVVITRCSNNYGPY-QF------PEKLIPL----FILNA 198
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
L +PL + G + R ++Y++D A+ L++E R G I+N+G NE+T +L ++
Sbjct: 199 LDGKPLPIYGDGLNVRDWLYVEDHARAIELVLEK-GRV-GEIYNIGG-GNELTNLELVKL 255
Query: 305 MTEVYAKVSGEAALEEPTVD-VSSKEFYGEGYD-----DSDKRIPDMTIINQQLGWNPKT 358
+ E+ K +E + V + G+D DS K I ++LGW PK
Sbjct: 256 ILELLGK-------DESLITYVKDR----PGHDRRYAIDSSK-------IRRELGWRPKV 297
Query: 359 SLWDLLEST 367
S + L T
Sbjct: 298 SFEEGLRKT 306
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 2e-15
Identities = 88/379 (23%), Positives = 145/379 (38%), Gaps = 99/379 (26%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKH-----LLEPESQTGADR 69
I + GA GFIG H+ ++ LLE +++ +D ND ++K L +
Sbjct: 2 KILVTGAAGFIGFHVAKR-LLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFK---- 56
Query: 70 IQFHRLNIKHDSRLEGLIKMA--DLTINLAA-------ICTPADYNTRPLDTIYSNFIDA 120
F + +++ L L K D I+LAA + P Y + SN +
Sbjct: 57 --FVKGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAY-------VDSNIVGF 107
Query: 121 LPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
L +++ C K L++ S+ VYG L P +D + S
Sbjct: 108 LNLLELCRHFGVKHLVYASSSSVYG------LNTKMPFSEDDR---VDHPISL------- 151
Query: 180 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGP--RMDFIPGIDGPSEGVPRVL 237
YA K+ E + + G+ T +R F GP R D L
Sbjct: 152 -----YAATKKANELMAHTYSHLYGIPTTGLRFFTVYGPWGRPDM-------------AL 193
Query: 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGH------------ 285
F+ +L +P+ + + G R F YI D +E V+ ++ PA+ N +
Sbjct: 194 FLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVEGVVRALDTPAKPNPNWDAEAPDPSTSS 253
Query: 286 ----IFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKR 341
++N+GN ++ V + E + + K + + L DV E Y D K
Sbjct: 254 APYRVYNIGN-NSPVKLMDFIEALEKALGKKAKKNYLPMQKGDVP------ETYADISK- 305
Query: 342 IPDMTIINQQLGWNPKTSL 360
+ + LG+ PKTSL
Sbjct: 306 ------LQRLLGYKPKTSL 318
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 3e-15
Identities = 79/312 (25%), Positives = 112/312 (35%), Gaps = 65/312 (20%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I +IG FIG L E LL H + V+N PE ++ +
Sbjct: 3 ILIIGGTRFIGKALVE-ELLAAGHDV---TVFNRGRTKPDLPE------GVEHIVGDRND 52
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
LE L+ + + Y R + K+ I S+
Sbjct: 53 RDALEELLG----GEDFDVVVDTIAYTPR----------QVERALDAFKGRVKQYIFISS 98
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
VY K G + + +PLR +P L + W Y K+ E ++
Sbjct: 99 ASVYLKP-GRVITESTPLR-EPDAVGLSDP-------------WDYGRGKRAAEDVLIEA 143
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
A +TIVRP P I GP + R LA F + L R +P+ + G S
Sbjct: 144 AA---FPYTIVRP-----------PYIYGPGDYTGR-LAYFFDRLARGRPILVPGDGHSL 188
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-EAAL 318
FI++KD A+L NP +A G IFN+ VT +L E AK G EA +
Sbjct: 189 VQFIHVKDLARALLGAAGNP-KAIGGIFNITGD-EAVTWDELLEAC----AKALGKEAEI 242
Query: 319 EEPTVDVSSKEF 330
V V
Sbjct: 243 ----VHVEEDFL 250
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 56/292 (19%), Positives = 101/292 (34%), Gaps = 70/292 (23%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILAL--DVYNDKIKHLLEPESQTGADRIQFHRL 75
+ + + GA GFIG ++ + L + +++ + ++ ++ F
Sbjct: 1 MVVTVFGATGFIGRYVVNR-LAKRGSQVIVPYRCEAYARRLLVMGD-----LGQVLFVEF 54
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRL 134
+++ D + ++ +D+ INL Y T+ + + K E +RL
Sbjct: 55 DLRDDESIRKALEGSDVVINLVGR----LYETKNFSFEDVHVEGPERLAKAAKEAGVERL 110
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
IH S L D SP Y +K E
Sbjct: 111 IHISA-----------------LGADA--------NSPS----------KYLRSKAEGEE 135
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP-LKLV 253
+ E E TIVRP G F+ A LL P L+
Sbjct: 136 AV----REAFPEATIVRPSVVFGREDRFL-----------NRFA----KLLAFLPFPPLI 176
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMM 305
GGQ++ +Y+ D EA+ +++P G + + P T+ +L E++
Sbjct: 177 GGGQTKFQPVYVGDVAEAIARALKDPE-TEGKTYELVGPK-VYTLAELVELL 226
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 8e-14
Identities = 82/362 (22%), Positives = 137/362 (37%), Gaps = 67/362 (18%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR- 82
G GFIGS+L + L+ +++ D N + + A+R + D R
Sbjct: 7 GGAGFIGSNLA-RFFLKQGWEVIGFD--NLMRRGSFGNLAWLKANREDGGVRFVHGDIRN 63
Query: 83 ---LEGLIKMADLTINLAAICTPA----------DYNTRPLDTIYSNFIDALPVVKYCSE 129
LE L + DL I+ AA P+ D+ T L T+ N ++A ++
Sbjct: 64 RNDLEDLFEDIDLIIHTAA--QPSVTTSASSPRLDFETNALGTL--NVLEA--ARQHA-- 115
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-SPCIFG---SIEKQRWSY 185
N I ST +VYG LP PL + Y L + SP ++ Y
Sbjct: 116 PNAPFIFTSTNKVYGD-----LPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLY 170
Query: 186 ACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSE-GVPR--VLACFSN 242
+K ++ + G GL+ + R + GP + G +A F
Sbjct: 171 GASKGAADQYVQEYGRIFGLKTVVFR-----------CGCLTGPRQFGTEDQGWVAYFLK 219
Query: 243 NLLRRQPLKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV-GNPHNEVTVRQ 300
+ +PL + GG+ R ++ D + L +NP R G +FN+ G N V++ +
Sbjct: 220 CAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLE 279
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKR--IPDMTIINQQLGWNPKT 358
L + E+ + E Y + D+ I D+ I ++ GW P+
Sbjct: 280 LIALCEEITGR---------------KMESYKDENRPGDQIWYISDIRKIKEKPGWKPER 324
Query: 359 SL 360
Sbjct: 325 DP 326
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 84/382 (21%), Positives = 147/382 (38%), Gaps = 84/382 (21%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTG--------ADRI 70
I + G G+IGSH + LLE+ H+++ LD + N + L E T DR
Sbjct: 2 ILVTGGAGYIGSHTV-RQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDRE 60
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
RL +H D I+ A + + +PL +N + L +++ +
Sbjct: 61 LLDRLFEEHK---------IDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQA 111
Query: 131 N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
K+ I S+ VYG+ + +DSPL +P Y +K
Sbjct: 112 GVKKFIFSSSAAVYGEPSSIPISEDSPL----------GPINP------------YGRSK 149
Query: 190 QLIERLIY-AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG--VPRVLACFSNNLLR 246
+ E+++ + A+ + I+R FN G G D P +P +
Sbjct: 150 LMSEQILRDLQKADPDWSYVILRYFNVAGAHPSGDIGEDPPGITHLIPYACQVAVG---K 206
Query: 247 RQPLKLVDG------GQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHNEVTVR 299
R L + G R +I++ D +A L +E G H++N+G +V
Sbjct: 207 RDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGGSHVYNLGYGQG-FSVL 265
Query: 300 QLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKR-------IPDMTIINQQL 352
+ + E + KVSG D + + +R + D + I ++L
Sbjct: 266 E----VIEAFKKVSG--------KDFP--------VELAPRRPGDPASLVADASKIRREL 305
Query: 353 GWNPK-TSLWDLLESTLTYQHR 373
GW PK T L ++++ ++ R
Sbjct: 306 GWQPKYTDLEEIIKDAWRWESR 327
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 8e-13
Identities = 84/364 (23%), Positives = 130/364 (35%), Gaps = 73/364 (20%)
Query: 24 GAGGFIGSHLCEKILLE---TPHKIL--ALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
G G GS+L E LLE H I+ + D+I HL + DRI H ++
Sbjct: 6 GITGQDGSYLAE-FLLEKGYEVHGIVRRSSSFNTDRIDHLYINK-----DRITLHYGDLT 59
Query: 79 HDSRLEGLIKMADLTI--NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK--RL 134
S L I+ +LAA P T N + L +++ R
Sbjct: 60 DSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDARF 119
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ---L 191
S+ E YGK + +P R P SP YA +K
Sbjct: 120 YQASSSEEYGKVQELPQSETTPFR--PR--------SP------------YAVSKLYADW 157
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPR---MDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
I R Y E GL R FN GPR I + V R+ A +
Sbjct: 158 ITRN-YREA--YGLFAVNGRLFNHEGPRRGETFVTRKI---TRQVARIKAG------LQP 205
Query: 249 PLKL--VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
LKL +D ++R + +D +EA L+++ + + +VR+ E+
Sbjct: 206 VLKLGNLD---AKRDWGDARDYVEAYWLLLQQG---EPDDYVIATGET-HSVREFVELA- 257
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ SG E +D ++ + D + D + ++LGW P+ S +L+
Sbjct: 258 ---FEESGLTGDIEVEID---PRYFRPT--EVDLLLGDPSKAREELGWKPEVSFEELVRE 309
Query: 367 TLTY 370
L
Sbjct: 310 MLDA 313
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 3e-12
Identities = 87/372 (23%), Positives = 150/372 (40%), Gaps = 67/372 (18%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + G G+IGSH LLE + ++ LD + N + L E RI+F+ +I
Sbjct: 1 KVLVTGGAGYIGSHTV-VELLEAGYDVVVLDNLSNGHREALPRIEKI----RIEFYEGDI 55
Query: 78 KHDSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRL 134
+ + L+ + D I+ AA+ + +PL +N + L +++ + K
Sbjct: 56 RDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVKNF 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ S+ VYG+ + +++PL +P Y K ++E+
Sbjct: 116 VFSSSAAVYGEPETVPITEEAPL----------NPTNP------------YGRTKLMVEQ 153
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID--GPSEGVPRVLACFSNNLLRRQPLKL 252
++ GL + I+R FN G + G D P+ +P VL L RR+ L +
Sbjct: 154 ILRDLAKAPGLNYVILRYFNPAGAHPSGLIGEDPQIPNNLIPYVLQVA---LGRREKLAI 210
Query: 253 V-------DGGQSQRTFIYIKDAIEAVLLMIENPARANGH-IFNVGNPHNEVTVRQLAEM 304
DG R +I++ D +A +L +E G I+N+G +V +
Sbjct: 211 FGDDYPTPDG-TCVRDYIHVVDLADAHVLALEKLENGGGSEIYNLGTGRG-YSVLE---- 264
Query: 305 MTEVYAKVSGEAALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+ E + KVSG+ E D +S D K ++LGW PK L
Sbjct: 265 VVEAFEKVSGKPIPYEIAPRRAGDPASL------VADPSK-------AREELGWKPKRDL 311
Query: 361 WDLLESTLTYQH 372
D+ E +Q
Sbjct: 312 EDMCEDAWNWQS 323
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 2e-11
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 69/349 (19%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSR 82
GA GFIGSHL E L+ +++ A +YN L+ D+I+ +I+
Sbjct: 5 GADGFIGSHLVEA-LVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRDPDS 63
Query: 83 LEGLIKMADLTINLAA-ICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC 140
+ +K D+ +LAA I P Y P + +N L V++ + ++++H ST
Sbjct: 64 VRKAMKGCDVVFHLAALIAIPYSY-IAPDSYVDTNVTGTLNVLQAARDLGVEKVVHTSTS 122
Query: 141 EVYGKTIGSFLP--KDSPLR-QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
EVYG ++P + PL+ Q P Y+ +K ++L
Sbjct: 123 EVYGT--AQYVPIDEKHPLQGQSP-----------------------YSASKIGADQLAL 157
Query: 198 AEGAENGLEFTIVRPFNWIGPRMD---FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+ TI+RPFN GPR IP I + ++ +KL
Sbjct: 158 SFYRSFNTPVTIIRPFNTYGPRQSARAVIPTI-------------ITQIASGKRRIKL-- 202
Query: 255 GGQS-QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY---A 310
G S R F Y+ D + + + E+ G + N+G+ E+++ +++ E+
Sbjct: 203 GSLSPTRDFNYVTDTVRGFIAIAESDK-TVGEVINIGSNF-EISIGDTVKLIAEIMGSEV 260
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTS 359
++ + P K + D+ K I + GW PK S
Sbjct: 261 EIETDEERLRP-----EKSEVERLWCDNSK-------IKELTGWQPKYS 297
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 9e-11
Identities = 86/363 (23%), Positives = 139/363 (38%), Gaps = 85/363 (23%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGAD---RIQFHR 74
I + G GFIGS+ IL E P +++ LD K+ + E+ + R +F +
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLD----KLTYAGNLENLADLEDNPRYRFVK 56
Query: 75 LNIKHDSRLEGLIK--MADLTINLAA-------ICTPADYNTRPLDTIYSNFIDALPVVK 125
+I + L D ++ AA I PA + I +N + +++
Sbjct: 57 GDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAF-------IETNVVGTYTLLE 109
Query: 126 YCSENNK--RLIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+ R H ST EVYG G + +PL P +SP
Sbjct: 110 AVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL--AP--------SSP---------- 149
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
Y+ +K + L+ A GL I R N GP P + +P
Sbjct: 150 --YSASKAASDHLVRAYHRTYGLPALITRCSNNYGP-------YQFPEKLIPL----MIT 196
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKD---AIEAVLLMIENPARAN-GHIFNVGNPHNEVTV 298
N L +PL + GQ R ++Y++D AI VL + G +N+G NE T
Sbjct: 197 NALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE------KGRVGETYNIGG-GNERTN 249
Query: 299 RQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIP-DMTIINQQLGWNPK 357
++ E + E+ L + ++ + E D+R D + I ++LGW PK
Sbjct: 250 LEVVETILEL---------LGKDEDLIT----HVEDRPGHDRRYAIDASKIKRELGWAPK 296
Query: 358 TSL 360
+
Sbjct: 297 YTF 299
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 68/287 (23%), Positives = 106/287 (36%), Gaps = 58/287 (20%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY--NDKIKHLLEPESQTGADRIQFHRLN 76
I + G GFIGS+L + + IL +D +K K+L+ + D+ F
Sbjct: 1 MIIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWV 60
Query: 77 IKHD--SRLEGLIKMADLTINLAAICTPADYNTRPLDTIY---SNFIDALPVVKYCSENN 131
K D ++E + C+ +T D Y +N+ ++ YC E
Sbjct: 61 RKGDENFKIEAIFHQG--------ACS----DTTETDGKYMMDNNYQYTKELLHYCLEKK 108
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R I+ S+ VYG F P Y +K L
Sbjct: 109 IRFIYASSAAVYGNGSLGFAEDIETPNLRPLNV--------------------YGYSKLL 148
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC-FSNNLLRRQPL 250
++ G E + +R FN GPR +G + N + + +
Sbjct: 149 FDQWARRHGKEVLSQVVGLRYFNVYGPREYH--------KGRMASVVFHLFNQIKAGEKV 200
Query: 251 KL-------VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
KL DG Q R F+Y+KD ++ L +ENP+ +G IFNVG
Sbjct: 201 KLFKSSDGYADGEQ-LRDFVYVKDVVKVNLFFLENPS-VSG-IFNVG 244
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 87/395 (22%), Positives = 149/395 (37%), Gaps = 96/395 (24%)
Query: 19 TICMIGAGGFIGSHLCEKILLETP-HKILALDVYN-----DKIKHLLEPESQTGADRIQF 72
I + G GFIGS+ IL + P ++ LD + + + + R +F
Sbjct: 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE------DSPRYRF 55
Query: 73 HRLNIKHDSRLEGLIK--MADLTINLAA-------ICTPADYNTRPLDTIYSNFI----- 118
+ +I ++ L K D ++ AA I PA + I +N +
Sbjct: 56 VQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPF-------IQTNVVGTYTL 108
Query: 119 -DALPVVKYCSENNKRLIHFSTCEVYG---KTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+A KY + R H ST EVYG +F + +P +P+ SP
Sbjct: 109 LEA--ARKYWGK--FRFHHISTDEVYGDLGLDDDAF-TETTPY--NPS--------SP-- 151
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
Y+ +K + L+ A GL TI R N GP P + +P
Sbjct: 152 ----------YSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF-------PEKLIP 194
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHN 294
++ N L +PL + G R ++Y++D A+ L++ + G +N+G N
Sbjct: 195 LMI----INALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK-GKI-GETYNIGG-GN 247
Query: 295 EVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDD---SDKRIP-DMTIINQ 350
E T ++ + + E+ K D +D D+R D + I +
Sbjct: 248 ERTNLEVVKTICELLGK------------DKPDYRDLITFVEDRPGHDRRYAIDASKIKR 295
Query: 351 QLGWNPKTSLWDLLESTLT--YQHRTYAEAIKQAV 383
+LGW P+ + L T+ + + E +K
Sbjct: 296 ELGWRPQETFETGLRKTVDWYLDNEWWWEPLKDGE 330
|
Length = 340 |
| >gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGH-IFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GGQ+ R FI I+D ++ + L +ENPA+A + +FN + +V +LAEM+ E +K+
Sbjct: 258 GGQT-RGFISIRDTVQCLELALENPAKAGEYRVFN--QFTEQFSVGELAEMVAEAGSKLG 314
Query: 314 GEAALEE-PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL---- 368
+ +E P V ++E Y Y+ + ++ D LG P LL+S L
Sbjct: 315 LDVKVEHLPNPRVEAEEHY---YNAKNTKLLD-------LGLEPHYLSESLLDSILNFAV 364
Query: 369 TYQHRTYAEAIKQAVA 384
Y R + I V
Sbjct: 365 KYADRVDEKRILPKVL 380
|
Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 4e-09
Identities = 63/299 (21%), Positives = 100/299 (33%), Gaps = 82/299 (27%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALD-----VYNDKIKHLLEPESQTGADR---IQFHRL 75
GA GFIG L +K+L +A+ + + L + +S T H
Sbjct: 6 GANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDSFTDLFLGVDAVVHLA 65
Query: 76 NIKHDSRLEGLIKMAD-------LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 128
H +G ++D LT LA
Sbjct: 66 ARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGV----------------------- 102
Query: 129 ENNKRLIHFSTCEVYGKTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
KR + S+ +V G+ F D P QD Y
Sbjct: 103 ---KRFVFLSSVKVNGEGTVGAPFDETDPPAPQDA-----------------------YG 136
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
+K ER + GA +G+E I+RP P + GP GV A + R
Sbjct: 137 RSKLEAERALLELGASDGMEVVILRP-----------PMVYGP--GVRGNFARLMRLIDR 183
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMM 305
PL +++R+ + + + ++A+ L I P ANG F V + V+ +L + +
Sbjct: 184 GLPLPPG-AVKNRRSLVSLDNLVDAIYLCISLPKAANG-TFLVSDGPP-VSTAELVDEI 239
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 6e-09
Identities = 78/383 (20%), Positives = 146/383 (38%), Gaps = 85/383 (22%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + G G+IGSH + LL+T H+++ LD + N LL+ + +F+ ++
Sbjct: 2 KVLVTGGAGYIGSHTV-RQLLKTGHEVVVLDNLSNGHKIALLKLQ-------FKFYEGDL 53
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNT------RPLDTIYSNFIDALPVVKYCSENN 131
+ L + + + A+ A + PL +N + L +++ +
Sbjct: 54 LDRALLTAVFE----ENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG 109
Query: 132 -KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
K+ I ST VYG+ S + + SP P +P Y +K
Sbjct: 110 VKKFIFSSTAAVYGEPTTSPISETSP--LAPI--------NP------------YGRSKL 147
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG--VPRVLACFSNNLLRRQ 248
+ E ++ N + I+R FN G D G P +P +R
Sbjct: 148 MSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALG---KRD 204
Query: 249 PLKLVDG-------GQSQRTFIYIKDAIEAVLLMIENPARANG--HIFNVGNPHNEVTVR 299
L + G G R +I++ D +A +L ++ + G +IFN+G+ + +V
Sbjct: 205 KLF-IFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY-LKEGGSNNIFNLGSGNG-FSVL 261
Query: 300 QLAEMMTEVYAKVSGEAALEEPTVDVSSK------EFYGEGYDDSDKRIPDMTIINQQLG 353
+ + E KV+G + V+++ + DS K Q LG
Sbjct: 262 E----VIEAAKKVTG----RDIPVEIAPRRAGDPAILVA----DSSK-------ARQILG 302
Query: 354 WNPK-TSLWDLLESTLTYQHRTY 375
W P L D+++ + + +
Sbjct: 303 WQPTYDDLEDIIKDAWDWHQQRH 325
|
Length = 329 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 2e-08
Identities = 64/317 (20%), Positives = 119/317 (37%), Gaps = 42/317 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILAL--DVYN-DKIKHLLEPESQTGADRIQFHRLN 76
+ + GA GF+ SH+ E LLE +K+ A D K+ HLL+ +++ G R++ +
Sbjct: 1 VLVTGASGFVASHVVE-QLLERGYKVRATVRDPSKVKKVNHLLDLDAKPG--RLELAVAD 57
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA-LPVVKYCSENN--KR 133
+ + + +IK ++A TP ++++ + + I L +K + KR
Sbjct: 58 LTDEQSFDEVIKGCAGVFHVA---TPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKR 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP----CIFGSIEKQRWSYACAK 189
+ S+ +PK P + D +K W YA +K
Sbjct: 115 FVLTSS------AGSVLIPK--PNVEGIVL-----DEKSWNLEEFDSDPKKSAWVYAASK 161
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
L E+ + EN ++ V P IG S G ++ + N
Sbjct: 162 TLAEKAAWKFADENNIDLITVIPTLTIGT---IFDSETPSSSGW--AMSLITGNEGVSPA 216
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
L L+ G ++++ D A + +E P +I GN L + + + Y
Sbjct: 217 LALIPPGY----YVHVVDICLAHIGCLELPIARGRYICTAGN----FDWNTLLKTLRKKY 268
Query: 310 AKVSGEAALEEPTVDVS 326
+ + D+S
Sbjct: 269 PSYTFPTDFPDQGQDLS 285
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 3e-08
Identities = 91/364 (25%), Positives = 156/364 (42%), Gaps = 76/364 (20%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILAL--DVYN-DKIKHLLE-PESQTGADRIQFHR 74
T+C+ GA GFIGS L + LLE + + A D N K+KHLL+ P + T R+ +
Sbjct: 7 TVCVTGASGFIGSWLVMR-LLERGYTVRATVRDPANVKKVKHLLDLPGATT---RLTLWK 62
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTR-PLDTIYSNFIDA-LPVVKYCSENN- 131
++ + + I+ ++A TP D+ ++ P + + ++ L ++K C++
Sbjct: 63 ADLAVEGSFDDAIRGCTGVFHVA---TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKT 119
Query: 132 -KRLIHFS---TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF-GSIEKQRWSYA 186
+R++ S T V Q P Y ++ S F + W Y
Sbjct: 120 VRRIVFTSSAGTVNV-------------EEHQKPVYD--EDCWSDLDFCRRKKMTGWMYF 164
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
+K L E+ + AENGL+F + P +GP FI S +P L
Sbjct: 165 VSKTLAEKAAWKYAAENGLDFISIIPTLVVGP---FI------STSMPPSLI-------- 207
Query: 247 RQPLKLVDGGQS------QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
L L+ G ++ Q F+++ D A + + E+PA +I + ++ T+
Sbjct: 208 -TALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPAAEGRYICS----SHDATIHD 262
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LA+M+ E Y + + A D+ S EF S K++ D+ G+ K SL
Sbjct: 263 LAKMLREKYPEYNIPARFPGIDEDLKSVEF-------SSKKLTDL-------GFTFKYSL 308
Query: 361 WDLL 364
D+
Sbjct: 309 EDMF 312
|
Length = 351 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 94/392 (23%), Positives = 156/392 (39%), Gaps = 111/392 (28%)
Query: 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDV--YNDKIKHLLEPESQTGAD 68
+P I + GA GFI SH+ +++ P KI+ LD Y +K+L +S
Sbjct: 1 MATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSS---- 56
Query: 69 RIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY---------SNFID 119
N K ++G I ADL +N I T +DTI ++F +
Sbjct: 57 ------PNFKF---VKGDIASADL-VNYLLI-------TEGIDTIMHFAAQTHVDNSFGN 99
Query: 120 ALPVVKYCSENN-----------------KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162
+ K NN +R IH ST EVYG+T
Sbjct: 100 SFEFTK----NNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET---------------- 139
Query: 163 YYVLKEDASPCIFGSIEKQRW----SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGP 218
EDA G+ E + Y+ K E L+ A G GL R N GP
Sbjct: 140 ----DEDA---DVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 192
Query: 219 RMDFIPGIDGPSEGVPR--VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMI 276
F P + +P+ +LA ++ +PL + G + R+++Y +D EA +++
Sbjct: 193 N-QF------PEKLIPKFILLA------MQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239
Query: 277 ENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD 336
GH++N+G E V +A+ + +++ E+ V ++ F + Y
Sbjct: 240 HKG--EVGHVYNIGT-KKERRVIDVAKDICKLFGLDP-----EKSIKFVENRPFNDQRYF 291
Query: 337 DSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
D+++ ++LGW +TS + L+ T+
Sbjct: 292 LDDQKL-------KKLGWQERTSWEEGLKKTM 316
|
Length = 668 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 76/372 (20%), Positives = 130/372 (34%), Gaps = 88/372 (23%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
GA GF+GS+L LL +++ AL L ++ ++ + L
Sbjct: 5 GATGFLGSNLVRA-LLAQGYRVRALVRSGSDAVLLDGL-------PVEVVEGDLTDAASL 56
Query: 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP-VVKYCSENN-KRLIHFSTCE 141
+K D +LAA + +Y ++ V+ E +R++H S+
Sbjct: 57 AAAMKGCDRVFHLAAF---TSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA 113
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
G + + +P E P Y +K L E + E A
Sbjct: 114 ALGGPPDGRIDETTPWN---------ERPFPN----------DYYRSKLLAELEVL-EAA 153
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
GL+ IV P GP S G + + N L P GG S
Sbjct: 154 AEGLDVVIVNPSAVFGP-----GDEGPTSTG--LDVLDYLNGKLPAYP----PGGTS--- 199
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMM---------------- 305
F+ ++D E + +E R +I +G + ++ +QL E +
Sbjct: 200 FVDVRDVAEGHIAAMEKGRRGERYI--LGGEN--LSFKQLFETLAEITGVKPPRRTIPPW 255
Query: 306 --------TEVYAKVSGEAALEEP-TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNP 356
+E+ A+++G+ L P T V + + SDK ++LG++P
Sbjct: 256 LLKAVAALSELKARLTGKPPLLTPRTARVLRRNYLY----SSDK-------ARRELGYSP 304
Query: 357 KTSLWDLLESTL 368
L + L TL
Sbjct: 305 -RPLEEALRDTL 315
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 5e-07
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YA AK ++ A + G + P N GP +F P S +P ++ F
Sbjct: 130 YAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHP---ENSHVIPALIRRFHEAK 186
Query: 245 LRRQPLKLVDG-GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
P +V G G R F+++ D +AV+ ++ + A H+ NVG+ +EVT+++LAE
Sbjct: 187 ANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAE-HV-NVGS-GDEVTIKELAE 243
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
++ EV GE + +SK D + +++ D + + + LGW+PK SL D
Sbjct: 244 LVKEV-VGFEGELVWD------TSKP------DGTPRKLMDSSKL-RSLGWDPKFSLKDG 289
Query: 364 LEST 367
L+ T
Sbjct: 290 LQET 293
|
Length = 306 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 67/287 (23%), Positives = 104/287 (36%), Gaps = 62/287 (21%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPH-KILALDVYND--KIKHLLEPESQTGADRIQFHRLN 76
I + G GFIGS+L K L E IL +D D K +L AD + ++
Sbjct: 1 IIVTGGAGFIGSNLV-KALNERGITDILVVDNLRDGHKFLNL--------ADLVIADYID 51
Query: 77 IKHD--SRLE-GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
K D RLE G + + A + + + + +N+ + ++ +C+E
Sbjct: 52 -KEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYM--MENNYQYSKRLLDWCAEKGIP 108
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
I+ S+ YG F R Y +S Q +
Sbjct: 109 FIYASSAATYGDGEAGFREGRELERPLNVY------------------GYSKFLFDQYVR 150
Query: 194 RLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
R + E GL + FN GPR + V N + +
Sbjct: 151 RRVLPEALSAQVVGLRY-----FNVYGPREYH-------KGKMASVAFHLFNQIKAGGNV 198
Query: 251 KL-------VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
KL DG Q R F+Y+KD ++ L ++EN +G IFN+G
Sbjct: 199 KLFKSSEGFKDGEQL-RDFVYVKDVVDVNLWLLENG--VSG-IFNLG 241
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 68/306 (22%), Positives = 118/306 (38%), Gaps = 67/306 (21%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE--SQTGADRIQFHRLN 76
TI + G G IGS L +IL P K++ D +K+ H L E S+ D+++F +
Sbjct: 4 TILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKL-HELVRELRSRFPHDKLRFIIGD 62
Query: 77 IKHDSRLEGLIKM--ADLTINLAAI--CTPADYNTRPLDTIYSNFIDALPVVKYCSENN- 131
++ RL K D+ + AA+ + N P + I +N + V+ EN
Sbjct: 63 VRDKERLRRAFKERGPDIVFHAAALKHVPSMEDN--PEEAIKTNVLGTKNVIDAAIENGV 120
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP-CIFGSIEKQRWSYACAKQ 190
++ + ST D A +P + G K+
Sbjct: 121 EKFVCIST--------------------DKA-------VNPVNVMG----------ATKR 143
Query: 191 LIERLIYAEGAENG-LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ E+L+ A+ + +F+ VR N +G R +P F + + P
Sbjct: 144 VAEKLLLAKNEYSSSTKFSTVRFGNVLGSRGSVLPL--------------FKKQIKKGGP 189
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
L + D + R F+ I +A++ VL + ++G P V + LAE + E+
Sbjct: 190 LTVTDPDMT-RFFMTIPEAVDLVLQACILGDGGGIFLLDMGPP---VKILDLAEALIELL 245
Query: 310 AKVSGE 315
E
Sbjct: 246 GYEPYE 251
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 87/373 (23%), Positives = 147/373 (39%), Gaps = 66/373 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLN 76
I + G GFIGS L I+ ET ++ +D Y + L P +Q+ +R F +++
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMS-LAPVAQS--ERFAFEKVD 59
Query: 77 IKHDSRLEGLIK--MADLTINLAA-------ICTPADYNTRPLDTIYSNFIDALPVVKYC 127
I + L + D ++LAA I PA + + Y+ A
Sbjct: 60 ICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAL 119
Query: 128 SENNK---RLIHFSTCEVYGKTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+E+ K R H ST EVYG + F + +P +SP
Sbjct: 120 TEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPY----------APSSP---------- 159
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
Y+ +K + L+ A GL I N GP P + +P ++
Sbjct: 160 --YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGP-------YHFPEKLIPLMIL---- 206
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNE----VTV 298
N L +PL + GQ R ++Y++D A+ + G +N+G HNE V
Sbjct: 207 NALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKV--GETYNIGG-HNERKNLDVV 263
Query: 299 RQLAEMMTEVYA-KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
+ E++ E+ K G A + V+ + G+D + D + I ++LGW P+
Sbjct: 264 ETICELLEELAPNKPQGVAHYRDLITFVADR----PGHD--LRYAIDASKIARELGWLPQ 317
Query: 358 TSLWDLLESTLTY 370
+ + T+ +
Sbjct: 318 ETFESGMRKTVQW 330
|
Length = 355 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 4e-06
Identities = 64/284 (22%), Positives = 107/284 (37%), Gaps = 73/284 (25%)
Query: 106 NTRPLDTIYSNFIDALPVVKYCSENN-KRLIHF-STCEVYGKTIGSFLPKDSPLRQDPAY 163
T P D + N + V+ K+L+ S+C +Y P +P
Sbjct: 69 MTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSSC-IY--------PDLAP------- 112
Query: 164 YVLKEDASPCIF-GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDF 222
+ E + G E YA AK+ +L A + G ++ V P N GP +F
Sbjct: 113 QPIDESD---LLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDYISVMPTNLYGPHDNF 169
Query: 223 -------IPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS---------QRTFIYIK 266
IP L+R+ + GG+ +R F+Y
Sbjct: 170 DPENSHVIPA------------------LIRKFHEAKLRGGKEVTVWGSGTPRREFLYSD 211
Query: 267 DAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326
D A++ ++EN + NVG+ E+++R+LAE + EV GE + +
Sbjct: 212 DLARAIVFLLENYDE-PIIV-NVGSGV-EISIRELAEAIAEVVG-FKGEIVFD------T 261
Query: 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
SK D +++ D++ + LGW P T L + T +
Sbjct: 262 SK------PDGQPRKLLDVSKLR-ALGWFPFTPLEQGIRETYEW 298
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 49/280 (17%), Positives = 85/280 (30%), Gaps = 48/280 (17%)
Query: 23 IGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82
G GF G L +++L + + D I E S I+F + +I +
Sbjct: 5 TGGSGFFGERLVKQLLERGGTYVRSFD-----IAPPGEALSAWQHPNIEFLKGDITDRND 59
Query: 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYS-NFIDALPVVKYCSENN-KRLIHFSTC 140
+E + AD + AAI A P D + N V+ C ++
Sbjct: 60 VEQALSGADCVFHTAAIVPLA----GPRDLYWEVNVGGTQNVLDACQRCGVQKF------ 109
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
VY + + D D+ YA K + E ++
Sbjct: 110 -VYTSSSSVIFGGQNIHNGDETLPYPPLDSDM------------YAETKAIAEIIVLEAN 156
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ L +RP GP + VP + + + G +
Sbjct: 157 GRDDLLTCALRPAGIFGPGDQGL---------VPILFEW----AEKGLVKFVFGRGNNLV 203
Query: 261 TFIYIKDAIEAVLLMIEN---PARANGHIFNVGN--PHNE 295
F Y+ + A +L +G + + + PHN
Sbjct: 204 DFTYVHNLAHAHILAAAALVKGKTISGQTYFITDAEPHNM 243
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 65/301 (21%), Positives = 114/301 (37%), Gaps = 64/301 (21%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIK---- 78
G GF+G HL ++ LLE K+L L + H E+ ADR++ ++
Sbjct: 5 GGTGFLGRHLVKR-LLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPNL 63
Query: 79 ----HDSRLEGLIKMADLTINLAAICTPADYNTR-PLDTIYSNFIDA-LPVVKYCSE-NN 131
SR L D I+ AA Y+ + P + + ID V++ + +
Sbjct: 64 GLSAAASRE--LAGKVDHVIHCAAS-----YDFQAPNEDAWRTNIDGTEHVLELAARLDI 116
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQD-PAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
+R + ST V G G+ + Q+ Y E+ + A+Q
Sbjct: 117 QRFHYVSTAYVAGNREGNIRETELNPGQNFKNPY--------------EQSKAE---AEQ 159
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGP----RMDFIPGIDGPSEGVPRVLACFSNNLLR 246
L+ + T+ RP +G R++ IDG NLL
Sbjct: 160 LVRAAATQ------IPLTVYRPSIVVGDSKTGRIE---KIDGL---------YELLNLLA 201
Query: 247 RQPLKLVDGGQSQRT--FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
+ L G + + +A++ + + P ANG IF++ +P T+R++A++
Sbjct: 202 KLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKKP-EANGQIFHLTDP-TPQTLREIADL 259
Query: 305 M 305
Sbjct: 260 F 260
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 54/269 (20%), Positives = 89/269 (33%), Gaps = 58/269 (21%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQ----------F 72
GA GF+G L EK+L P KI L+ +S Q+ +R++
Sbjct: 7 GATGFLGKVLLEKLLRSCPD--------IGKIYLLIRGKSGQSAEERLRELLKDKLFDRG 58
Query: 73 HRLNIKHDSRL-------------------EGLIKMADLTINLAAICTPADYNTRPLDTI 113
LN +S++ + LI+ ++ I+ AA ++ R + +
Sbjct: 59 RNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAAT---VTFDERLDEAL 115
Query: 114 YSNFIDALPVVKYCSE--NNKRLIHFSTCEVYG---KTIGSFLPKDSPLRQDPAYYVLKE 168
N + L +++ K +H ST V G P + + L +
Sbjct: 116 SINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMD 175
Query: 169 DASPCIFGSIEKQRW--SYACAKQLIERLIYAEGAENGLEFTIVRPF----NWIGPRMDF 222
D +Y K L ERL+ E L IVRP P +
Sbjct: 176 DLELERATPKLLGGHPNTYTFTKALAERLVLKERG--NLPLVIVRPSIVGATLKEPFPGW 233
Query: 223 IPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
I +GP + + +LR
Sbjct: 234 IDNFNGPD----GLFLAYGKGILRTMNAD 258
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 8e-06
Identities = 80/356 (22%), Positives = 136/356 (38%), Gaps = 69/356 (19%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G G IGSHL E LLE H+++ +D + + L + +I
Sbjct: 3 VLITGGAGQIGSHLIE-HLLERGHQVVVIDNFATGRREHLPDHPN-----LTVVEGSIAD 56
Query: 80 DSRLEGLIKM--ADLTINLAAICT-PADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+ ++ L D ++ AA P D+ DT+ +N + VV+ + KRLI
Sbjct: 57 KALVDKLFGDFKPDAVVHTAAAYKDPDDWYE---DTL-TNVVGGANVVQAAKKAGVKRLI 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
+F T YG P P+R D +P GS SYA +K E
Sbjct: 113 YFQTALCYGLK-----PMQQPIRLD-------HPRAPP--GS------SYAISKTAGEYY 152
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ +G++F R N GPR + GP L F L + + D
Sbjct: 153 LEL----SGVDFVTFRLANVTGPRN-----VIGP-------LPTFYQRLKAGKKCFVTD- 195
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE-VYAKVSG 314
++R F+++KD V ++ + F+ G ++++L + + E + +
Sbjct: 196 --TRRDFVFVKDLARVVDKALDGIRGHGAYHFSSGEDV---SIKELFDAVVEALDLPLRP 250
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
E + E G DD + D + Q GW T L + + + L +
Sbjct: 251 EVEVVEL------------GPDDVPSILLDPSRTFQDFGWKEFTPLSETVSAALAW 294
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 60/287 (20%), Positives = 87/287 (30%), Gaps = 80/287 (27%)
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMAD-LTINLAAICTPADYNTRPLDTIYSNFID 119
PE + D GL+ D L I+L PA D +D
Sbjct: 31 PEKLAADRPAGVT--PLAADLTQPGLLADVDHLVISLPP---PAGSYRGGYDPGLRALLD 85
Query: 120 ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
AL + +R+I+ S+ VYG G ++ + SP E
Sbjct: 86 ALAQL----PAVQRVIYLSSTGVYGDQQGEWVDETSPPNPST-----------------E 124
Query: 180 KQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236
R L+ AE A TI+R GI GP R
Sbjct: 125 SGRA-----------LLEAEQALLALGSKPTTILRL-----------AGIYGPGRHPLR- 161
Query: 237 LACFSNNLLRRQPLKLVDGGQ-SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNE 295
L + G + R I++ D + A+ ++ PA G ++NV +
Sbjct: 162 ------RLAQGTGR-PPAGNAPTNR--IHVDDLVGALAFALQRPAP--GPVYNVVDDL-P 209
Query: 296 VTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRI 342
VT E Y + L P F EG KR+
Sbjct: 210 VTRG-------EFYQAAAELLGLPPPPFI--PFAFLREG-----KRV 242
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 42/186 (22%)
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
VV N +L+ +YG GS + +D+P P + K
Sbjct: 86 NVVAAAEANGAKLVLPGNVYMYGPQAGSPITEDTP--FQP---------------TTRKG 128
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD---FIPGIDGPSEGVPRVLA 238
R + +E + A A+ + IVR ++ GP + +G V
Sbjct: 129 R-----IRAEMEERLLAAHAKGDIRALIVRAPDFYGPGAINSWLGAALFAILQGKTAVFP 183
Query: 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTV 298
L + Y+ D A++ + E P A G +++ +T
Sbjct: 184 ---------GNLDTP------HEWTYLPDVARALVTLAEEP-DAFGEAWHLPG-AGAITT 226
Query: 299 RQLAEM 304
R+L +
Sbjct: 227 RELIAI 232
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 3e-05
Identities = 96/388 (24%), Positives = 151/388 (38%), Gaps = 78/388 (20%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
P + + IC+ GAGGFI SH+ + L H I+A D K +H+ E +FH
Sbjct: 18 PSEKLRICITGAGGFIASHIARR-LKAEGHYIIASDW--KKNEHMSEDMFCH-----EFH 69
Query: 74 RLNIKHDSRLEGLIKMADLTINLAA-------ICTPADYNTRPLDTIYSNFIDALPVVKY 126
++++ + K D NLAA I + N + +Y+N + + +++
Sbjct: 70 LVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQS----NHSVI--MYNNTMISFNMLEA 123
Query: 127 CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE-DASPCIFGSIEKQRWS 184
N KR + S+ +Y P+ L + + LKE DA P E Q +
Sbjct: 124 ARINGVKRFFYASSACIY--------PEFKQLETNVS---LKESDAWPA-----EPQD-A 166
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y K E L + G+E I R N GP + G E P A F
Sbjct: 167 YGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTW----KGGREKAP---AAFCRKA 219
Query: 245 L-RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
L ++ G+ R+F +I + +E VL + ++ R N+G+ E
Sbjct: 220 LTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSDFREP---VNIGS----------DE 266
Query: 304 M--MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
M M E+ + P + G + R D T+I ++LGW P L
Sbjct: 267 MVSMNEMAEIALSFENKKLPIKHI-------PGPEGVRGRNSDNTLIKEKLGWAPTMRLK 319
Query: 362 DLLESTLTYQHRTYAEAIKQAVAKPVAS 389
D L +TY IK+ + K A
Sbjct: 320 DGLR--ITY------FWIKEQIEKEKAE 339
|
Length = 370 |
| >gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNE-VTVRQLAEMMTEVYAKVS 313
GGQ+ R F+ I+D + + + I NPA+ F V N E +V +LA+++T+ K+
Sbjct: 305 GGQT-RGFLDIRDTVRCIEIAIANPAKPGE--FRVFNQFTEQFSVNELAKLVTKAGEKLG 361
Query: 314 GEAALEE-PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNP---KTSLWD-LLESTL 368
+ + P V ++E Y Y+ ++ +LG P SL D LL +
Sbjct: 362 LDVEVISVPNPRVEAEEHY---YNAKHTKL-------CELGLEPHLLSDSLLDSLLNFAV 411
Query: 369 TYQHRTYAEAIKQAV 383
Y+ R I AV
Sbjct: 412 KYKDRVDTTLILPAV 426
|
Length = 442 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 3e-04
Identities = 81/379 (21%), Positives = 151/379 (39%), Gaps = 57/379 (15%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+ P + G GFIGS L E++L ++ LD ++ +H L+ + +T Q+ R
Sbjct: 13 LAPKRWLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLD-DVRTSVSEEQWSR 70
Query: 75 L-----NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSN---FIDALPVVKY 126
+I+ + + K D ++ AA+ + P+ T +N F++ L +
Sbjct: 71 FIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAAR- 129
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
+ + ++ YG D P P I I + YA
Sbjct: 130 -DAHVSSFTYAASSSTYG---------DHP-------------DLPKIEERIGRPLSPYA 166
Query: 187 CAKQLIERLIYAEGAENGLEFTIV--RPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
K + E +YA+ EF + R FN G R + P+ V+ + +L
Sbjct: 167 VTKYVNE--LYADVFARSYEFNAIGLRYFNVFGRRQN-------PNGAYSAVIPRWILSL 217
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLL-MIENPARANGHIFNVGNPHNEVTVRQLAE 303
L+ +P+ + G + R F YI++ I+A LL N + ++NV + ++ +L
Sbjct: 218 LKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVA-VGDRTSLNELYY 276
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
++ + E + EP K+F D D+T I L + P+ + +
Sbjct: 277 LIRDGLNLWRNEQSRAEPIY----KDFRD---GDVKHSQADITKIKTFLSYEPEFDIKEG 329
Query: 364 LESTLTY---QHRTYAEAI 379
L+ TL + +H T ++
Sbjct: 330 LKQTLKWYIDKHSTLYSSV 348
|
Length = 348 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 50/231 (21%)
Query: 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADR 69
L+GR T C+ GA G+IGS L K+LL+ + + A K HLL DR
Sbjct: 3 LEGRESATGTYCVTGATGYIGSWLV-KLLLQRGYTVHATLRDPAKSLHLL--SKWKEGDR 59
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT-----IYSNFID----- 119
++ R +++ + + +K D ++AA +++ + S ID
Sbjct: 60 LRLFRADLQEEGSFDEAVKGCDGVFHVAA---SMEFDVSSDHNNIEEYVQSKVIDPAIKG 116
Query: 120 ALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLR---------QDPAYYVLKE 168
L V+K C ++ KR+ V+ +I + KDS R Q P +V
Sbjct: 117 TLNVLKSCLKSKTVKRV-------VFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNT 169
Query: 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEF------TIVRPF 213
AS W Y +K L E + ENG++ T+ PF
Sbjct: 170 KASG----------WVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF 210
|
Length = 353 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 52/290 (17%), Positives = 97/290 (33%), Gaps = 65/290 (22%)
Query: 23 IGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82
GA G +G L ++L E ++++ R +L++
Sbjct: 5 TGATGMLGRALV-RLLKERGYEVIGTGR-----------------SRASLFKLDLTDPDA 46
Query: 83 LEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
+E I+ D+ IN AA + P N + + + E RLIH ST
Sbjct: 47 VEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGARLIHISTD 106
Query: 141 EVY-GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
V+ GK Y +EDA + Y +K L E +
Sbjct: 107 YVFDGKKGP---------------YK-EEDAPNPLN--------VYGKSKLLGEVAV--- 139
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ I+R +W+ + E + R+ + +V
Sbjct: 140 -LNANPRYLILR-TSWLYGELKN-------GENFVEWML---RLAAERKEVNVVHDQ--I 185
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ Y D +A+L +IE G I+++ N ++ + A+++ +
Sbjct: 186 GSPTYAADLADAILELIE-RNSLTG-IYHLSNS-GPISKYEFAKLIADAL 232
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.002
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ +IGAG +G + + +I D +K + L P+ R ++ +
Sbjct: 1 VLIIGAG-GVGQGVAPLLARHGDLEITVADRSLEKAQALAAPK---LGLRFIAIAVDADN 56
Query: 80 DSRLEGLIKMADLTINLA 97
L L+K DL INLA
Sbjct: 57 YEALVALLKEGDLVINLA 74
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 100.0 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 100.0 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 100.0 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 100.0 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.98 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.97 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.97 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.96 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.96 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.94 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.94 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.93 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.92 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.92 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.92 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.92 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.92 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.91 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.91 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.9 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.9 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.9 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.89 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.89 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.89 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.88 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.88 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.88 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.88 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.87 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.87 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.86 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.86 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.86 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.86 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.85 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.85 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.85 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.84 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.84 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.84 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.84 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.84 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.82 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.82 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.82 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.81 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.81 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.81 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.8 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.8 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.8 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.8 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.79 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.79 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.79 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.79 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.78 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.78 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.78 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.78 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.78 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.78 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.78 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.77 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.77 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.77 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.76 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.75 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.75 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.75 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.75 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.75 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.74 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.73 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.73 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.73 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.73 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.73 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.73 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.72 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.72 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.72 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.72 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.72 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.71 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.7 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.7 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.69 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.69 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.68 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.67 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.67 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.67 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.67 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.66 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.65 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.64 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.64 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.6 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.6 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.6 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.59 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.58 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.57 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.56 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.54 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.53 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.52 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.51 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.51 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.48 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.47 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.45 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.45 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.44 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.43 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.41 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.39 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.39 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.37 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.37 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.35 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.34 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.3 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.28 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.26 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.25 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.23 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.23 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.2 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.18 | |
| PLN00106 | 323 | malate dehydrogenase | 99.16 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.15 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.15 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.11 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.97 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.89 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.87 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.86 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.75 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.74 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.73 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.61 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.52 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.5 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.49 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.48 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.44 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.43 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.37 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.35 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.3 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.28 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.22 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.19 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.17 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.03 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.01 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.96 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.93 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.88 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.87 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.86 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.83 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.83 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.82 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.82 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.78 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.73 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.71 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.69 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.69 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.66 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.61 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.61 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.6 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.59 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.58 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.57 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.56 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.56 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.55 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.51 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.47 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.43 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.34 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.28 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.28 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.27 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.26 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.26 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.26 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.26 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.22 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.22 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.22 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.2 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.2 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.17 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.14 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.13 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.12 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.11 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.07 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.07 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.06 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.03 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.03 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.02 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.02 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 97.0 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 96.98 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.98 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.97 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.95 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.95 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.95 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.94 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.93 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.93 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.9 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.88 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.87 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.84 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.83 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.8 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.8 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.8 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.79 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.78 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.74 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.73 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.73 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.69 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.68 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 96.68 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 96.68 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.68 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.67 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.65 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.64 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.62 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.61 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.61 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.55 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.55 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 96.53 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.51 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.48 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.48 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.46 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.46 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.46 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.46 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.44 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.44 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.43 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.42 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.41 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.4 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.39 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.38 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.37 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.37 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.36 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.33 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.33 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.3 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.3 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.29 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.26 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 96.22 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.22 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.21 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.2 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.2 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.19 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 96.19 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.19 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.18 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.16 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.13 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.1 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 96.08 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.06 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.03 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.02 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.01 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.99 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.95 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 95.95 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.95 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 95.92 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.91 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 95.9 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.88 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 95.88 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.85 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 95.82 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.8 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 95.79 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.76 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 95.74 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 95.72 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 95.72 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.7 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 95.69 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.69 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.67 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.63 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 95.62 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.6 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 95.59 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.59 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 95.59 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 95.57 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.56 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 95.55 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 95.55 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 95.55 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 95.55 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 95.48 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.48 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.47 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.47 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.47 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.46 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.46 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.45 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.45 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 95.42 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.39 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.39 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.39 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.38 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.37 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.37 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.36 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.35 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.34 |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-55 Score=420.35 Aligned_cols=384 Identities=93% Similarity=1.462 Sum_probs=302.7
Q ss_pred CCCCCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 6 VRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 6 ~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
.+.+|++++.++|+|||||||||||++|+++|++++|++|++++|.......+..........+++++.+|+.|.+.+.+
T Consensus 3 ~~~~~~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 3 ARLDLDGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred chhcCCCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH
Confidence 47789999999999999999999999999999998459999999876554433221111122479999999999999999
Q ss_pred hhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccc
Q 016370 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYV 165 (390)
Q Consensus 86 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~ 165 (390)
+++++|+|||+|+...+..+..++...+..|+.++.+++++|++.+++|||+||.++||...+.+.+|+.|..+++..+.
T Consensus 83 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~ 162 (386)
T PLN02427 83 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYV 162 (386)
T ss_pred HhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccc
Confidence 99999999999998765455566777788999999999999998889999999999999876666677777766655556
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
..|+.++...++...|.+.|+.+|.++|.+++.+++.++++++++||+++|||+..+..+..++......++..++..+.
T Consensus 163 ~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (386)
T PLN02427 163 LKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 242 (386)
T ss_pred ccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh
Confidence 66666665555555677899999999999999988888999999999999999865433222333445567778888888
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
+++++.+.+++.+.++||||+|+|++++.+++++....+++||++++++.+|+.|+++.+.+.+|...............
T Consensus 243 ~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~ 322 (386)
T PLN02427 243 RREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDV 322 (386)
T ss_pred cCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999888899999999999999999998753235679999985248999999999999998532111100000111
Q ss_pred CcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHHHHHHcCCCCC
Q 016370 326 SSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVAS 389 (390)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (390)
....+....+.+......|.+|++++|||+|+++++++|+++++|+++.+...++.++.+|-+|
T Consensus 323 ~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (386)
T PLN02427 323 SSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTYAEAIKKAMSKPTAS 386 (386)
T ss_pred CcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Confidence 1111112222344566789999999999999999999999999999999999999999988764
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=359.78 Aligned_cols=312 Identities=23% Similarity=0.330 Sum_probs=268.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCC--hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP-HKILALDVYN--DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~--~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
|++|||||.||||++++++++++.. .+|++++.-. .....+.... ..++++++++|+.|.+.+..++++ +|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 6899999999999999999999733 5588887643 1122221111 136899999999999999999995 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCC--CCCCCCCCCCCcccccccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGS--FLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~--~~~e~~~~~~~~~~~~~~e 168 (390)
|+|+|+.++..++-..|..+++.|+.||.+|++++++.. .||+++||..|||.-... .++|.+|+.
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~---------- 147 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYN---------- 147 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCC----------
Confidence 999999999988999999999999999999999999998 499999999999987643 677888874
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
|.|+|+.||+.++.+++.|.+.+|++++|.|+++-|||.+. ..-+++.++.+++.|+
T Consensus 148 ------------PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqf-----------pEKlIP~~I~nal~g~ 204 (340)
T COG1088 148 ------------PSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF-----------PEKLIPLMIINALLGK 204 (340)
T ss_pred ------------CCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC-----------chhhhHHHHHHHHcCC
Confidence 77899999999999999999999999999999999999765 3568999999999999
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
++++.|+|.+.|||+||+|-|+++..++++.. .|++|||+++ ...+..++++.|++.+++.... .....
T Consensus 205 ~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~--~GE~YNIgg~-~E~~Nlevv~~i~~~l~~~~~~--------~~~li 273 (340)
T COG1088 205 PLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK--IGETYNIGGG-NERTNLEVVKTICELLGKDKPD--------YRDLI 273 (340)
T ss_pred CCceecCCcceeeeEEeHhHHHHHHHHHhcCc--CCceEEeCCC-ccchHHHHHHHHHHHhCccccc--------hhhhe
Confidence 99999999999999999999999999999985 6999999997 6899999999999999986542 00001
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.+...+++-..++.+|.+|++++|||+|++++++||+++++||.+|..
T Consensus 274 ~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 274 TFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred EeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence 223334456667889999999999999999999999999999998653
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-52 Score=358.69 Aligned_cols=311 Identities=22% Similarity=0.347 Sum_probs=266.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+||||||.||||+|.+.+|++. |++|+++++-.......... ..++++++|+.|.+.+.++|.+ +|+|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~-G~~vvV~DNL~~g~~~~v~~------~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT-GHEVVVLDNLSNGHKIALLK------LQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC-CCeEEEEecCCCCCHHHhhh------ccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 68999999999999999999998 99999999876543333221 1168999999999999999986 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
+||.....++-++|.++++.|+.||.+|+++|++.+ ++|||.||+.|||.....|+.|+.|+.
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~---------------- 137 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLA---------------- 137 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCC----------------
Confidence 999999999999999999999999999999999999 999999999999999999999999874
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC-eEEe
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP-LKLV 253 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 253 (390)
|.|+||.||++.|++++.+.+.+++++++||.+++.|-...+..+ ....+.+.+++.+++.++...+ +.++
T Consensus 138 ------p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iG--e~~~~~thLip~~~q~A~G~r~~l~if 209 (329)
T COG1087 138 ------PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLG--QRYPGATLLIPVAAEAALGKRDKLFIF 209 (329)
T ss_pred ------CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccC--CCCCCcchHHHHHHHHHhcCCceeEEe
Confidence 778999999999999999999999999999999999966542222 1233457888888888877666 6666
Q ss_pred c------CCcceeeeeeHHHHHHHHHHHHhCCCCC-CCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 254 D------GGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 254 ~------~~~~~~~~i~v~D~a~~~~~~l~~~~~~-~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
| ||...||||||.|+|++++++++.-... ...+||+++| +..|+.|+++++.++.|++.+....+
T Consensus 210 G~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G-~G~SV~evi~a~~~vtg~~ip~~~~~------- 281 (329)
T COG1087 210 GDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSG-NGFSVLEVIEAAKKVTGRDIPVEIAP------- 281 (329)
T ss_pred CCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCC-CceeHHHHHHHHHHHhCCcCceeeCC-------
Confidence 5 4667899999999999999999864321 2269999998 89999999999999999765544333
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHHHHHH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLTYQHR 373 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~~~~ 373 (390)
.+.+++...+.|.+|++++|||+|++ ++++.+++...|..+
T Consensus 282 ------RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 282 ------RRAGDPAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ 323 (329)
T ss_pred ------CCCCCCceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence 44577888999999999999999999 999999999999984
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=379.88 Aligned_cols=322 Identities=20% Similarity=0.283 Sum_probs=254.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc----cccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL----EPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+++|+|||||||||||++|+++|+++ |++|++++|......... .........+++++.+|+.|.+.+..+++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL-NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 46789999999999999999999999 999999998653221111 0000001246889999999999999999999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|||+|+.........++...+++|+.+|.+|+++|++.+ ++|||+||.+|||...+.+..|+.+.
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~------------ 159 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIG------------ 159 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCC------------
Confidence 99999999876656667788899999999999999999999 89999999999997654444444332
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
.|.+.|+.+|..+|.+++.+.+.++++++++||+++|||+.+ +......+++.++.++..+++
T Consensus 160 ----------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~-------~~~~~~~~i~~~~~~~~~~~~ 222 (348)
T PRK15181 160 ----------RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQN-------PNGAYSAVIPRWILSLLKDEP 222 (348)
T ss_pred ----------CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCC-------CCCccccCHHHHHHHHHcCCC
Confidence 256689999999999999988888999999999999999864 111223467888888888999
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
+.++|+|.+.++|+|++|+|++++.++.... ...+++||++++ +.+|+.|+++.+.+.++..........+
T Consensus 223 i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g-~~~s~~e~~~~i~~~~~~~~~~~~~~~~------- 294 (348)
T PRK15181 223 IYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVG-DRTSLNELYYLIRDGLNLWRNEQSRAEP------- 294 (348)
T ss_pred cEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCC-CcEeHHHHHHHHHHHhCcccccccCCCc-------
Confidence 9999999999999999999999998876532 124689999997 7999999999999988743211000000
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.+............+|.+|++++|||+|+++++|+|+++++|++.+
T Consensus 295 ~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 295 IYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred ccCCCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 0111122333456799999999999999999999999999999876
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-50 Score=340.74 Aligned_cols=334 Identities=36% Similarity=0.523 Sum_probs=280.0
Q ss_pred CCCCCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 6 VRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 6 ~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
.+..++..+..+++|+||||.||||+||+..|+.+ ||+|++++..-........- ......++.+.-|+..+
T Consensus 16 ~~~~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~e-gh~VIa~Dn~ftg~k~n~~~--~~~~~~fel~~hdv~~p----- 87 (350)
T KOG1429|consen 16 SRLREQVKPSQNLRILITGGAGFIGSHLVDKLMTE-GHEVIALDNYFTGRKENLEH--WIGHPNFELIRHDVVEP----- 87 (350)
T ss_pred chhhhcccCCCCcEEEEecCcchHHHHHHHHHHhc-CCeEEEEecccccchhhcch--hccCcceeEEEeechhH-----
Confidence 34455666777899999999999999999999999 89999999754333222110 01134667777666655
Q ss_pred hhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccc
Q 016370 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYV 165 (390)
Q Consensus 86 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~ 165 (390)
++.++|.|+|+|+..++..+..+|.+.+..|+.++.+++-.|++.++||++.||+.|||.....|..|+.-....
T Consensus 88 l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vn----- 162 (350)
T KOG1429|consen 88 LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVN----- 162 (350)
T ss_pred HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccC-----
Confidence 788899999999999999999999999999999999999999999999999999999999655555444322211
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
+..|++.|...|..+|.++.+|.++.|+.+.|.|+.++|||...++. ...++.|+.+++
T Consensus 163 ------------pigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~d---------grvvsnf~~q~l 221 (350)
T KOG1429|consen 163 ------------PIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDD---------GRVVSNFIAQAL 221 (350)
T ss_pred ------------cCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCC---------ChhhHHHHHHHh
Confidence 22477789999999999999999999999999999999999988532 367888999999
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
++.|+.++|+|.+.|+|.||+|++++++++++++. .+-+|++++ +.+|+.|+++++.+..+....+
T Consensus 222 r~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~---~~pvNiGnp-~e~Tm~elAemv~~~~~~~s~i---------- 287 (350)
T KOG1429|consen 222 RGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDY---RGPVNIGNP-GEFTMLELAEMVKELIGPVSEI---------- 287 (350)
T ss_pred cCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCC---cCCcccCCc-cceeHHHHHHHHHHHcCCCcce----------
Confidence 99999999999999999999999999999999974 346999998 7999999999999998644333
Q ss_pred CcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHHHHHHcCCCCCC
Q 016370 326 SSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVASS 390 (390)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (390)
.+....+++++.+.-|.+++++.|||.|+++|+|+|+.++.|+++..++..+.....+..+|
T Consensus 288 ---~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~~~~~gs~~~~~~~ 349 (350)
T KOG1429|consen 288 ---EFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRERIAREKKKGSSKPVASS 349 (350)
T ss_pred ---eecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 33445567888999999999999999999999999999999999999999988876666654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-48 Score=364.79 Aligned_cols=338 Identities=38% Similarity=0.693 Sum_probs=257.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC-ChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~-d~~~~~~~~~~~d~Vih 95 (390)
||+|||||||||||++|+++|+++.|++|++++|+......+.. ..+++++.+|++ +.+.+.++++++|+|||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH 74 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN------HPRMHFFEGDITINKEWIEYHVKKCDVILP 74 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc------CCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence 57999999999999999999998646999999987644332222 246899999998 77788888999999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+|+...+..+..++...++.|+.++.+++++|++.+++|||+||..+||...+.++.|+.+ +..+
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~---------------~~~~ 139 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEAS---------------PLVY 139 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCcccc---------------cccc
Confidence 9998766556678888899999999999999999889999999999999754433433321 1112
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
.|...|.+.|+.+|..+|..++.+++.++++++++||+++|||+.... ..+......++..++.++..++++.+.++
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 216 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSI---YTPKEGSSRVVTQFLGHIVRGEPISLVDG 216 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCC---CccccCCcchHHHHHHHHhCCCceEEecC
Confidence 233346778999999999999999888899999999999999975410 00112234578888889999999988888
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC--CCcccCCcccccC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYG 332 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~ 332 (390)
+.+.++|||++|+|+++..+++++.. ..+++||++++.+.+|+.|+++.|.+.++..+...... ..........+.+
T Consensus 217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
T PRK11908 217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYG 296 (347)
T ss_pred CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccC
Confidence 89999999999999999999987532 35789999985247999999999999998643321100 0000001011111
Q ss_pred CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 333 EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 333 ~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
...........|++|+++.|||+|+++++++|+++++|++++...+
T Consensus 297 ~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~~~ 342 (347)
T PRK11908 297 KGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVAEA 342 (347)
T ss_pred cCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 1112233556789999999999999999999999999998665443
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-47 Score=361.58 Aligned_cols=310 Identities=27% Similarity=0.424 Sum_probs=246.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.|||||||||||||++|+++|+++ |++|++++|..... ....... ...+++++.+|+.+.. +.++|+||
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~-----~~~~D~Vi 189 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI-----LLEVDQIY 189 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc-----ccCCCEEE
Confidence 4479999999999999999999999 99999999853221 1111000 1136788999987653 46799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
|+|+...+..+..++...++.|+.++.+|+++|++.+.+|||+||.+|||...+.+.+|+.....+
T Consensus 190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~-------------- 255 (436)
T PLN02166 190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVN-------------- 255 (436)
T ss_pred ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCC--------------
Confidence 999987665555678889999999999999999998889999999999997655555554311000
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
+..|.+.|+.+|..+|++++.+.+.++++++++||+++|||+... ....++..++.++..++++.++|
T Consensus 256 ---p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~---------~~~~~i~~~i~~~l~~~~i~v~g 323 (436)
T PLN02166 256 ---PIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCL---------DDGRVVSNFVAQTIRKQPMTVYG 323 (436)
T ss_pred ---CCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCC---------CccchHHHHHHHHhcCCCcEEeC
Confidence 112566899999999999999988889999999999999997531 11246778888999999999999
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
++.+.++|+|++|+|+++..+++.. .+++||++++ +.+|+.|+++.+.+.+|........+. .
T Consensus 324 ~g~~~rdfi~V~Dva~ai~~~~~~~---~~giyNIgs~-~~~Si~ela~~I~~~~g~~~~i~~~p~-------------~ 386 (436)
T PLN02166 324 DGKQTRSFQYVSDLVDGLVALMEGE---HVGPFNLGNP-GEFTMLELAEVVKETIDSSATIEFKPN-------------T 386 (436)
T ss_pred CCCeEEeeEEHHHHHHHHHHHHhcC---CCceEEeCCC-CcEeHHHHHHHHHHHhCCCCCeeeCCC-------------C
Confidence 9999999999999999999999864 3569999997 799999999999999986543322211 1
Q ss_pred CCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 335 YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 335 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
........+|++|+++.|||+|+++++++|+++++||+++...
T Consensus 387 ~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~~~~ 429 (436)
T PLN02166 387 ADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNRILN 429 (436)
T ss_pred CCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 1233456789999999999999999999999999999876544
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-46 Score=376.37 Aligned_cols=339 Identities=37% Similarity=0.673 Sum_probs=259.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH-HHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR-LEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~-~~~~~~~~d~V 93 (390)
-++|+|||||||||||++|+++|+++.||+|++++|.+........ ..+++++.+|++|.+. +.++++++|+|
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~------~~~~~~~~gDl~d~~~~l~~~l~~~D~V 386 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG------HPRFHFVEGDISIHSEWIEYHIKKCDVV 386 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC------CCceEEEeccccCcHHHHHHHhcCCCEE
Confidence 3678999999999999999999998647999999997754332221 2478999999998655 67788899999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
||+|+...+..+..++...+++|+.++.+++++|++.+++|||+||.++||...+.+++|+.+..+
T Consensus 387 iHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~-------------- 452 (660)
T PRK08125 387 LPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLI-------------- 452 (660)
T ss_pred EECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccc--------------
Confidence 999998876556677888899999999999999999889999999999999765555666554210
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
..|...|.+.|+.+|.++|.+++.+++.++++++++||+++|||+...... .......++..++.++..++++.+.
T Consensus 453 -~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~---~~~~~~~~i~~~i~~~~~~~~i~~~ 528 (660)
T PRK08125 453 -VGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNA---ARIGSSRAITQLILNLVEGSPIKLV 528 (660)
T ss_pred -cCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCcccccc---ccccccchHHHHHHHhcCCCCeEEe
Confidence 112223667899999999999999988889999999999999997541000 0001125678888888889999888
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC--Ccccc
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV--SSKEF 330 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~ 330 (390)
|++.+.++|+|++|+|++++.++++.. ...+++||++++++.+|+.|+++.+.+.+|........+...... ....+
T Consensus 529 g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 608 (660)
T PRK08125 529 DGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSY 608 (660)
T ss_pred CCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccc
Confidence 899999999999999999999998753 124689999996237999999999999998543222221111000 00011
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
....+.+.....+|++|++++|||+|+++++++|+++++|++++.+-
T Consensus 609 ~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~ 655 (660)
T PRK08125 609 YGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDL 655 (660)
T ss_pred cccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccc
Confidence 11122234456789999999999999999999999999999987654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-46 Score=349.54 Aligned_cols=321 Identities=21% Similarity=0.305 Sum_probs=246.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEE-EecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILA-LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~V 93 (390)
||+|||||||||||++|++.|+++ |+++++ +++.... .............+++++.+|++|.+.+.+++++ +|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~-g~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE-TSDAVVVVDKLTYA-GNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc-CCCEEEEEecCccc-cchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 579999999999999999999999 887554 4443221 1111100000123678899999999999999985 9999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC---------C-CcEEEeeccccccccc--CCCCCCCCCCCCCc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN---------N-KRLIHFSTCEVYGKTI--GSFLPKDSPLRQDP 161 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~-~~~v~~Ss~~vy~~~~--~~~~~e~~~~~~~~ 161 (390)
||+||.........++...+++|+.++.+++++|.+. + ++||++||.++||... ..+++|+.+.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~---- 154 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPY---- 154 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCC----
Confidence 9999987544344567789999999999999999762 4 7999999999998643 2345555544
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
.|.+.|+.+|.++|.+++.++++.+++++++||+++|||+.. ...++..++
T Consensus 155 ------------------~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~-----------~~~~~~~~~ 205 (355)
T PRK10217 155 ------------------APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF-----------PEKLIPLMI 205 (355)
T ss_pred ------------------CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC-----------cccHHHHHH
Confidence 256689999999999999998888999999999999999753 124677777
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCC
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~ 321 (390)
.++..++++++++++++.++|+|++|+|+++..+++... .+++|||+++ +.+|+.|+++.+.+.+++.....+.+..
T Consensus 206 ~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~--~~~~yni~~~-~~~s~~~~~~~i~~~~~~~~~~~~~~~~ 282 (355)
T PRK10217 206 LNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK--VGETYNIGGH-NERKNLDVVETICELLEELAPNKPQGVA 282 (355)
T ss_pred HHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC--CCCeEEeCCC-CcccHHHHHHHHHHHhcccccccccccc
Confidence 888888888888999999999999999999999998753 5789999997 7999999999999998864322211110
Q ss_pred cccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.... ...+..........+.+|++|++++|||+|+++++|+|+++++||+.+.+
T Consensus 283 ~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 283 HYRD-LITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred cccc-cceecCCCCCCCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence 0000 00111112223345689999999999999999999999999999998754
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-46 Score=319.39 Aligned_cols=312 Identities=23% Similarity=0.335 Sum_probs=261.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCC--hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE-TPHKILALDVYN--DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
+++|||||.||||++.+..+..+ +.++.+.++.-. +..+.+.. ....++..++++|+.+...+..++.. +|.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~---~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP---VRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh---hccCCCceEeeccccchHHHHhhhccCchhh
Confidence 78999999999999999999986 456666666532 11222222 22457899999999999988888875 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCC-CCCCCCCCccccccccC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLP-KDSPLRQDPAYYVLKED 169 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~-e~~~~~~~~~~~~~~e~ 169 (390)
|||+|+..+...+..++......|+.++..|+++++..| ++|||+||..|||.+.+...+ |.+.+
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~------------ 151 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLL------------ 151 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccC------------
Confidence 999999999888999999999999999999999999997 999999999999999765555 54444
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
+|.++|+.+|+++|.+++.+.+.+|++++++|.++||||++. ...+++.|+.....+.+
T Consensus 152 ----------nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~-----------~~klipkFi~l~~~~~~ 210 (331)
T KOG0747|consen 152 ----------NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQY-----------PEKLIPKFIKLAMRGKE 210 (331)
T ss_pred ----------CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcC-----------hHHHhHHHHHHHHhCCC
Confidence 588899999999999999999999999999999999999875 24678889998889999
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
.++.|+|.+.++|+|++|+++++..+++..+ .|++||+++. ...+..|+++.|.+.+.+.......... ..
T Consensus 211 ~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~--~geIYNIgtd-~e~~~~~l~k~i~eli~~~~~~~~~~p~------~~ 281 (331)
T KOG0747|consen 211 YPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE--LGEIYNIGTD-DEMRVIDLAKDICELFEKRLPNIDTEPF------IF 281 (331)
T ss_pred cceecCcccceeeEeHHHHHHHHHHHHhcCC--ccceeeccCc-chhhHHHHHHHHHHHHHHhccCCCCCCc------ce
Confidence 9999999999999999999999999999953 7999999995 7999999999999998874432211111 11
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+.+.+.-...++.++.+|++ .|||+|+++|++||+.+++||.++.
T Consensus 282 ~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p~~eGLrktie~y~~~~ 326 (331)
T KOG0747|consen 282 FVEDRPYNDLRYFLDDEKIK-KLGWRPTTPWEEGLRKTIEWYTKNF 326 (331)
T ss_pred ecCCCCcccccccccHHHHH-hcCCcccCcHHHHHHHHHHHHHhhh
Confidence 22233334556889999997 8999999999999999999999876
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=353.88 Aligned_cols=308 Identities=26% Similarity=0.405 Sum_probs=242.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
++|||||||||||||++|++.|+++ |++|++++|..... ...... ....+++++.+|+.++. +.++|+||
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~---~~~~~~~~i~~D~~~~~-----l~~~D~Vi 188 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHH---FSNPNFELIRHDVVEPI-----LLEVDQIY 188 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhh---ccCCceEEEECCccChh-----hcCCCEEE
Confidence 5589999999999999999999999 99999998753211 111000 01246888999997753 45799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
|+|+...+..+..++...++.|+.++.+|+++|++.+++|||+||..||+.....+..|+.....+
T Consensus 189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~-------------- 254 (442)
T PLN02206 189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVN-------------- 254 (442)
T ss_pred EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCC--------------
Confidence 999987665555678899999999999999999999889999999999987654444444311000
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
+..+.+.|+.+|..+|.++..+.+.++++++++||+++|||+... ....++..++.++..++++.+++
T Consensus 255 ---P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~---------~~~~~v~~~i~~~l~~~~i~i~g 322 (442)
T PLN02206 255 ---PIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCI---------DDGRVVSNFVAQALRKEPLTVYG 322 (442)
T ss_pred ---CCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCc---------cccchHHHHHHHHHcCCCcEEeC
Confidence 112456899999999999999888889999999999999997531 01235677888888899999999
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
++++.++|+|++|+|++++.+++.. .+++||++++ +.+|+.|+++.+.+.++.+..+...+. .
T Consensus 323 ~G~~~rdfi~V~Dva~ai~~a~e~~---~~g~yNIgs~-~~~sl~Elae~i~~~~g~~~~i~~~p~-------------~ 385 (442)
T PLN02206 323 DGKQTRSFQFVSDLVEGLMRLMEGE---HVGPFNLGNP-GEFTMLELAKVVQETIDPNAKIEFRPN-------------T 385 (442)
T ss_pred CCCEEEeEEeHHHHHHHHHHHHhcC---CCceEEEcCC-CceeHHHHHHHHHHHhCCCCceeeCCC-------------C
Confidence 9999999999999999999999864 3569999997 799999999999999985433222111 1
Q ss_pred CCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 335 YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 335 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
..+.....+|++|++++|||+|+++++|+|+++++|+++..
T Consensus 386 ~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~ 426 (442)
T PLN02206 386 EDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRV 426 (442)
T ss_pred CCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhh
Confidence 12234557899999999999999999999999999998755
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-45 Score=341.49 Aligned_cols=321 Identities=20% Similarity=0.166 Sum_probs=244.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hcccccc---ccCCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPE---SQTGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~---~~~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
|+||||||+||||++|+++|+++ |++|++++|+++.. ..+.... ......+++++.+|++|.+.+.+++++ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK-GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC-CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence 58999999999999999999999 99999999876421 1111100 000124689999999999999999985 7
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C---cEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K---RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~---~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
|+|||+|+..+......++...+++|+.++.+++++|++.+ + +|||+||.++||.....+.+|+.+..
T Consensus 80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-------- 151 (343)
T TIGR01472 80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFY-------- 151 (343)
T ss_pred CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCC--------
Confidence 99999999876544455667788899999999999999877 3 89999999999976555566665542
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
|.+.|+.+|..+|.+++.++++++++++++|+.++|||+... ......+..++.++..
T Consensus 152 --------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--------~~~~~~~~~~~~~~~~ 209 (343)
T TIGR01472 152 --------------PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE--------NFVTRKITRAAAKIKL 209 (343)
T ss_pred --------------CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc--------cccchHHHHHHHHHHc
Confidence 667899999999999999988889999999999999997431 1233456666777777
Q ss_pred CCC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC------
Q 016370 247 RQP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE------ 319 (390)
Q Consensus 247 ~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~------ 319 (390)
+++ ..+.|++++.++|+||+|+|++++.+++++. +++|||+++ +.+|+.|+++.+.+.+|++......+
T Consensus 210 ~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~---~~~yni~~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 285 (343)
T TIGR01472 210 GLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK---PDDYVIATG-ETHSVREFVEVSFEYIGKTLNWKDKGINEVGR 285 (343)
T ss_pred CCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC---CccEEecCC-CceeHHHHHHHHHHHcCCCccccccccccccc
Confidence 764 4456888999999999999999999998752 468999997 79999999999999998643211100
Q ss_pred -CCcccCCc-ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHH
Q 016370 320 -EPTVDVSS-KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373 (390)
Q Consensus 320 -~~~~~~~~-~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 373 (390)
........ .........+.....+|++|++++|||+|+++++|+|+++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 286 CKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred ccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 00000000 0000112233445578999999999999999999999999999874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=342.31 Aligned_cols=315 Identities=23% Similarity=0.314 Sum_probs=243.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+.|+|||||||||||++|++.|+++ ||+|++++|....... . ....++++.+|++|.+.+..++.++|+|||
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~--~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMS--E-----DMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccccc--c-----ccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 4579999999999999999999999 9999999986532110 0 011357889999999999999999999999
Q ss_pred eccccCCc-cccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCC----CCCCCCCCCCCccccccccC
Q 016370 96 LAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGS----FLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 96 ~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~----~~~e~~~~~~~~~~~~~~e~ 169 (390)
+|+..... ....++...+..|+.++.+|+++|++.+ ++|||+||.++|+..... ++.|+.+.
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~------------ 159 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAW------------ 159 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCC------------
Confidence 99876422 1223445567889999999999999998 899999999999975321 12222210
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc-CC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-RQ 248 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (390)
+..|.+.|+.+|..+|.+++.+...++++++++||+++|||+..+. .....+...++.++.. +.
T Consensus 160 --------p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~-------~~~~~~~~~~~~~~~~~~~ 224 (370)
T PLN02695 160 --------PAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWK-------GGREKAPAAFCRKALTSTD 224 (370)
T ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCcc-------ccccccHHHHHHHHHcCCC
Confidence 1136778999999999999999888899999999999999976421 0111234556665554 57
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
++.+++++++.++|+|++|+++++..+++.. .+++||++++ +.+|+.|+++.+.+..|.+......+.+
T Consensus 225 ~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~nv~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~------- 293 (370)
T PLN02695 225 EFEMWGDGKQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD-EMVSMNEMAEIALSFENKKLPIKHIPGP------- 293 (370)
T ss_pred CeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc---CCCceEecCC-CceeHHHHHHHHHHHhCCCCCceecCCC-------
Confidence 8888899999999999999999999988764 3579999997 7999999999999988864433222211
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHHHHHH
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAV 383 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 383 (390)
.......+|++|+++.|||+|+++++++|+++++|++++......+..
T Consensus 294 -------~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~~~~~~~~~~ 341 (370)
T PLN02695 294 -------EGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKAEGS 341 (370)
T ss_pred -------CCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhhhcccc
Confidence 011234589999999999999999999999999999987776655443
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=347.97 Aligned_cols=339 Identities=18% Similarity=0.158 Sum_probs=242.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-h------ccc-------cc--cccCCCCCeeEEeCCC
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-K------HLL-------EP--ESQTGADRIQFHRLNI 77 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~------~~~-------~~--~~~~~~~~i~~~~~D~ 77 (390)
.+++|+||||||+||||++|+++|+++ |++|+++++..... . .+. .. .......+++++.+|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKR-GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 467899999999999999999999999 99999987532110 0 000 00 0000123688999999
Q ss_pred CChhHHHHhhcc--ccEEEEeccccCCccccCCh---hHHHHHhhhhHHHHHHHHHhCC-C-cEEEeecccccccccCCC
Q 016370 78 KHDSRLEGLIKM--ADLTINLAAICTPADYNTRP---LDTIYSNFIDALPVVKYCSENN-K-RLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 78 ~d~~~~~~~~~~--~d~Vih~a~~~~~~~~~~~~---~~~~~~nv~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~ 150 (390)
+|.+.+..++++ +|+|||+|+.........++ ...++.|+.++.+++++|++.+ + +|||+||..|||... .+
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~ 201 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-ID 201 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CC
Confidence 999999999985 89999999876543333333 3456899999999999999988 4 899999999999643 22
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCC---
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID--- 227 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~--- 227 (390)
++|.. ...++ ...|+..+ .+..|.+.|+.+|.++|.+++.+++.+|++++++||+++|||+........
T Consensus 202 ~~E~~-i~~~~---~~~e~~~~----~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li 273 (442)
T PLN02572 202 IEEGY-ITITH---NGRTDTLP----YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELI 273 (442)
T ss_pred Ccccc-ccccc---cccccccc----CCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccc
Confidence 33321 00000 00001000 122467789999999999999999889999999999999999864100000
Q ss_pred ---CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCC--ceEEecCCCCcccHHHHH
Q 016370 228 ---GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANG--HIFNVGNPHNEVTVRQLA 302 (390)
Q Consensus 228 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~--~~~nv~~~~~~~s~~~l~ 302 (390)
.+.......+..++.++..++++.++|+|.+.|+|+||+|+|++++.+++... ..+ .+||+++ +.+|+.|++
T Consensus 274 ~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~-~~g~~~i~Nigs--~~~si~el~ 350 (442)
T PLN02572 274 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA-KPGEFRVFNQFT--EQFSVNELA 350 (442)
T ss_pred cccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh-hcCceeEEEeCC--CceeHHHHH
Confidence 00001124677788888889999999999999999999999999999998642 123 5899987 379999999
Q ss_pred HHHHHH---hhcccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCccccc---CHHHHHHHHHHHHHHhHh
Q 016370 303 EMMTEV---YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT---SLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 303 ~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~---~~~~~l~~~~~~~~~~~~ 376 (390)
+++.+. +|.+......+.+. .........+|.+|++ +|||+|++ +++++|.+++.||+++-.
T Consensus 351 ~~i~~~~~~~g~~~~~~~~p~~~-----------~~~~~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~~~~~~~~~~~ 418 (442)
T PLN02572 351 KLVTKAGEKLGLDVEVISVPNPR-----------VEAEEHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLNFAVKYKDRVD 418 (442)
T ss_pred HHHHHHHHhhCCCCCeeeCCCCc-----------ccccccccCccHHHHH-HcCCCCCCcHHHHHHHHHHHHHHHHhhcc
Confidence 999998 77543332222111 0012234568999996 59999999 999999999999985444
Q ss_pred H
Q 016370 377 E 377 (390)
Q Consensus 377 ~ 377 (390)
.
T Consensus 419 ~ 419 (442)
T PLN02572 419 T 419 (442)
T ss_pred h
Confidence 3
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=336.79 Aligned_cols=318 Identities=19% Similarity=0.153 Sum_probs=247.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hcccccc--ccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPE--SQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~--~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
..++|+||||||+||||++|+++|+++ |++|++++|+++.. ..+.... ......+++++.+|++|.+.+.+++++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSK-GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 346789999999999999999999999 99999999875421 1111110 001124688999999999999999885
Q ss_pred --ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C-----cEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 90 --ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-----RLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-----~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+|+|||+|+.........++...+++|+.++.+++++|++.+ + +|||+||.++||.... +.+|+.+..
T Consensus 82 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~--- 157 (340)
T PLN02653 82 IKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFH--- 157 (340)
T ss_pred cCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCC---
Confidence 799999999875544445667778999999999999999888 4 8999999999998654 556665542
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
|.+.|+.+|.++|.+++.++++++++++..|+.++|||+... ..+...+..++
T Consensus 158 -------------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--------~~~~~~~~~~~ 210 (340)
T PLN02653 158 -------------------PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE--------NFVTRKITRAV 210 (340)
T ss_pred -------------------CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc--------ccchhHHHHHH
Confidence 667899999999999999988889999999999999997541 22344566667
Q ss_pred HHHhcCCCeEE-ecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCC
Q 016370 242 NNLLRRQPLKL-VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320 (390)
Q Consensus 242 ~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~ 320 (390)
.++..+.++.+ .|++++.++|+|++|+|++++.++++. .++.||++++ +.+|+.|+++.+.+.+|..........
T Consensus 211 ~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~---~~~~yni~~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 286 (340)
T PLN02653 211 GRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE---KPDDYVVATE-ESHTVEEFLEEAFGYVGLNWKDHVEID 286 (340)
T ss_pred HHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC---CCCcEEecCC-CceeHHHHHHHHHHHcCCCCCcceeeC
Confidence 77777776654 488899999999999999999999874 2578999997 799999999999999885311100000
Q ss_pred CcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
+. ...........+|++|++++|||+|+++++|+|+++++|+++...
T Consensus 287 ~~---------~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~~~ 333 (340)
T PLN02653 287 PR---------YFRPAEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLELAK 333 (340)
T ss_pred cc---------cCCccccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 00 001123345568999999999999999999999999999886554
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=333.33 Aligned_cols=312 Identities=20% Similarity=0.329 Sum_probs=239.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
||||||||+||||++|+++|+++ |+. |+++++... ....+.... ....++++.+|++|.+++.+++++ +|+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~-g~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN-TQDSVVNVDKLTYAGNLESLADVS---DSERYVFEHADICDRAELDRIFAQHQPDA 76 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh-CCCeEEEecCCCccchHHHHHhcc---cCCceEEEEecCCCHHHHHHHHHhcCCCE
Confidence 58999999999999999999999 765 666665431 111111100 023578899999999999999975 899
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC---------C-CcEEEeecccccccccC----------CCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN---------N-KRLIHFSTCEVYGKTIG----------SFLP 152 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~-~~~v~~Ss~~vy~~~~~----------~~~~ 152 (390)
|||+|+.........++...+++|+.++.+++++|++. + ++|||+||.++|+.... .+++
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~ 156 (352)
T PRK10084 77 VMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFT 156 (352)
T ss_pred EEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcc
Confidence 99999986543344567788999999999999999874 3 68999999999986321 1122
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
|+.+. .|.+.|+.+|..+|.+++.+++.++++++++|++.+|||+..
T Consensus 157 E~~~~----------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~----------- 203 (352)
T PRK10084 157 ETTAY----------------------APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHF----------- 203 (352)
T ss_pred ccCCC----------------------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcC-----------
Confidence 22222 366789999999999999998888999999999999999753
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcc
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~ 312 (390)
...++..++..+..+.++.+++++++.++|+|++|+|+++..+++... .+++||++++ +.+|+.++++.+++.++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~--~~~~yni~~~-~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 204 PEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGK--AGETYNIGGH-NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred ccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCceEEeCCC-CcCcHHHHHHHHHHHhccc
Confidence 124677777888888888888889999999999999999999998642 5789999997 7999999999999999863
Q ss_pred cCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.+... +... . ..+..........+.+|++|++++|||+|+++++++|+++++|++++
T Consensus 281 ~p~~~-~~~~-~---~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 281 VPKAT-SYRE-Q---ITYVADRPGHDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred ccccc-chhh-h---ccccccCCCCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 22110 0000 0 00111111223345789999999999999999999999999999886
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=329.18 Aligned_cols=314 Identities=17% Similarity=0.180 Sum_probs=242.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~V 93 (390)
++|+||||||+||||+++++.|+++ |++|++++|+............ ....++++.+|++|.+.+.+++++ +|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 5689999999999999999999999 9999999987654322111000 123577899999999999999985 7999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccC-CCCCCCCCCCCCccccccccCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~-~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
||+|+.........++...+++|+.++.+++++|++.+ +++|++||..+|+.... .+.+|+.+.
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~------------- 146 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPL------------- 146 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCC-------------
Confidence 99999765545556788899999999999999998876 79999999999986421 234444433
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-------CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-------GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
.|.+.|+.+|.++|.+++.+++.+ +++++++||+.+|||+... ...+++.++..
T Consensus 147 ---------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~----------~~~~~~~~~~~ 207 (349)
T TIGR02622 147 ---------GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA----------EDRLIPDVIRA 207 (349)
T ss_pred ---------CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch----------hhhhhHHHHHH
Confidence 256789999999999998886654 8999999999999997420 12467888888
Q ss_pred HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC---CCCCCceEEecCC-CCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP---ARANGHIFNVGNP-HNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~~~nv~~~-~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+..++++.+ +++++.++|+|++|+|++++.+++.. ....+++|||+++ ++.+++.++++.+.+.++.........
T Consensus 208 ~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~ 286 (349)
T TIGR02622 208 FSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDD 286 (349)
T ss_pred HhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeec
Confidence 888888876 46789999999999999999888742 1123579999974 269999999999998776422111110
Q ss_pred CCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+. ...........+|++|++++|||+|+++++++|+++++|++++-
T Consensus 287 -~~---------~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~ 332 (349)
T TIGR02622 287 -SD---------LNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAWL 332 (349)
T ss_pred -cC---------CCCCcccceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHh
Confidence 00 00112233456899999999999999999999999999998754
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=354.11 Aligned_cols=312 Identities=23% Similarity=0.346 Sum_probs=246.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCC--hhhhccccccccCCCCCeeEEeCCCCChhHHHHhh--c
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLE-TPHKILALDVYN--DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI--K 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~--~ 88 (390)
..++|+|||||||||||++|+++|+++ .+++|++++|.. +....+... ....+++++.+|++|.+.+..++ .
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~ 79 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS---KSSPNFKFVKGDIASADLVNYLLITE 79 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc---ccCCCeEEEECCCCChHHHHHHHhhc
Confidence 356789999999999999999999997 368999998753 111111110 01357899999999998888776 4
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCC---CCCCCCCCCCccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSF---LPKDSPLRQDPAY 163 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~---~~e~~~~~~~~~~ 163 (390)
++|+|||+|+.........++...++.|+.+|.+|+++|++.+ ++|||+||..+||.....+ ..|+.+.
T Consensus 80 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~------ 153 (668)
T PLN02260 80 GIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL------ 153 (668)
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC------
Confidence 6999999999876554555677888999999999999999986 7999999999999764321 1222222
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
.|.+.|+.+|..+|.+++.+.+.++++++++||+++|||+.. ...++..++..
T Consensus 154 ----------------~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~-----------~~~~i~~~~~~ 206 (668)
T PLN02260 154 ----------------LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF-----------PEKLIPKFILL 206 (668)
T ss_pred ----------------CCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCC-----------cccHHHHHHHH
Confidence 256789999999999999998888999999999999999754 12467777888
Q ss_pred HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
+..+.++.+.|++.+.++|||++|+|+++..+++... .+++||++++ +.+|+.|+++++.+.+|.+........
T Consensus 207 a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~--~~~vyni~~~-~~~s~~el~~~i~~~~g~~~~~~i~~~--- 280 (668)
T PLN02260 207 AMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE--VGHVYNIGTK-KERRVIDVAKDICKLFGLDPEKSIKFV--- 280 (668)
T ss_pred HhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCC-CeeEHHHHHHHHHHHhCCCCcceeeec---
Confidence 8889999999999999999999999999999998753 5789999997 799999999999999996432110000
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.........+.+|++|++ +|||+|+++++|+|+++++||+++..
T Consensus 281 --------~~~p~~~~~~~~d~~k~~-~lGw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 281 --------ENRPFNDQRYFLDDQKLK-KLGWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred --------CCCCCCcceeecCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhChh
Confidence 001112335568999996 69999999999999999999998754
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=327.03 Aligned_cols=321 Identities=19% Similarity=0.323 Sum_probs=242.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh----hccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI----KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
|.+|+|||||||||||++|+++|+++ |++|++++|..... ........ ....+++++.+|+.|.+.+..+++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA-GYKVVVIDNLDNSSEEALRRVKELAG-DLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCcchHHHHHHHHHhhc-ccCccceEEecCcCCHHHHHHHHHhC
Confidence 55689999999999999999999998 89999998753221 11111000 012468899999999999999887
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
++|+|||+|+.........++...++.|+.++.+++++|++.+ ++|||+||..+|+...+.+++|+.+..
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~--------- 151 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLS--------- 151 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCC---------
Confidence 4999999999765434445777889999999999999999988 899999999999876566677776653
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
|.+.|+.+|..+|.+++.+.+. .+++++++|++++||++.....+. ++. .....+..++.++..
T Consensus 152 -------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~-~~~-~~~~~~~~~~~~~~~ 216 (352)
T PLN02240 152 -------------ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGE-DPK-GIPNNLMPYVQQVAV 216 (352)
T ss_pred -------------CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccC-CCC-CCcchHHHHHHHHHh
Confidence 5568999999999999988654 579999999999999865322111 011 112223334445544
Q ss_pred CC--CeEEec------CCcceeeeeeHHHHHHHHHHHHhCC---CCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCC
Q 016370 247 RQ--PLKLVD------GGQSQRTFIYIKDAIEAVLLMIENP---ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315 (390)
Q Consensus 247 ~~--~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~ 315 (390)
++ ++.+.| ++.+.++|||++|+|++++.+++.. ....+++||++++ +.+|+.|+++.+.+.+|.+...
T Consensus 217 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~~ 295 (352)
T PLN02240 217 GRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTG-KGTSVLEMVAAFEKASGKKIPL 295 (352)
T ss_pred CCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCC-CcEeHHHHHHHHHHHhCCCCCc
Confidence 43 455554 6788999999999999999988642 1134589999997 7999999999999999865432
Q ss_pred cccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
...+. .........+|++|++++|||+|+++++++|+++++|++++.
T Consensus 296 ~~~~~-------------~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~ 342 (352)
T PLN02240 296 KLAPR-------------RPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342 (352)
T ss_pred eeCCC-------------CCCChhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence 22111 112233456899999999999999999999999999999875
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=318.89 Aligned_cols=289 Identities=15% Similarity=0.111 Sum_probs=227.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
||||||||+||||++|++.|+++ | +|++++|... .+.+|++|.+.+.+++++ +|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~-g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL-G-NLIALDVHST------------------DYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc-C-CEEEeccccc------------------cccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999998 7 6888887531 235899999999999984 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
||+...+..+..++...+.+|+.++.+|+++|++.+.++||+||..||+...+.+++|+.+.
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~------------------ 122 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDAT------------------ 122 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCC------------------
Confidence 99998776677788888899999999999999999988999999999988766667776654
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
.|.+.|+.+|+.+|.+++.++ .+++|+|++++|||+.. .++..++..+.+++++.+.++
T Consensus 123 ----~P~~~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~-------------~~~~~~~~~~~~~~~~~v~~d 181 (299)
T PRK09987 123 ----APLNVYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN-------------NFAKTMLRLAKEREELSVIND 181 (299)
T ss_pred ----CCCCHHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCC-------------CHHHHHHHHHhcCCCeEEeCC
Confidence 366789999999999997764 36799999999999753 367778888888889999887
Q ss_pred --CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCC
Q 016370 256 --GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGE 333 (390)
Q Consensus 256 --~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
+.+.+.+.+++|+++++..++.... .+++||++++ +.+|+.|+++.|.+.++........ ........ ..+..
T Consensus 182 ~~g~~~~~~~~~d~~~~~~~~~~~~~~--~~giyni~~~-~~~s~~e~~~~i~~~~~~~g~~~~~-~~i~~~~~-~~~~~ 256 (299)
T PRK09987 182 QFGAPTGAELLADCTAHAIRVALNKPE--VAGLYHLVAS-GTTTWHDYAALVFEEARKAGITLAL-NKLNAVPT-SAYPT 256 (299)
T ss_pred CcCCCCCHHHHHHHHHHHHHHhhccCC--CCCeEEeeCC-CCccHHHHHHHHHHHHHhcCCCcCc-Ceeeecch-hhcCC
Confidence 6666677778889999888876542 3469999997 7999999999998876532111000 00000000 01111
Q ss_pred CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHH
Q 016370 334 GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371 (390)
Q Consensus 334 ~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~ 371 (390)
...++....+|++|+++.|||+|. +|+++|+++++-+
T Consensus 257 ~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~ 293 (299)
T PRK09987 257 PARRPHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTEL 293 (299)
T ss_pred CCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHH
Confidence 223456778999999999999986 9999999998643
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=320.83 Aligned_cols=306 Identities=25% Similarity=0.358 Sum_probs=243.3
Q ss_pred EEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLET-PHKILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLT 93 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~V 93 (390)
+|||||||||||++|+++|++++ .++|++++|... ....+.... ...+++++.+|+.|++++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 59999999999999999999982 278999887431 111111110 123688999999999999999987 9999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCC-CCCCCCCCCCCccccccccCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~-~~~e~~~~~~~~~~~~~~e~~ 170 (390)
||+|+.........++...+++|+.++.+++++|++.+ .++||+||..+||..... +.+|+.+.
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~------------- 144 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL------------- 144 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCC-------------
Confidence 99999875444445677888999999999999999875 589999999999975432 45555443
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
.|.+.|+.+|..+|.+++.++.+.+++++++||+.+|||+.. ...+++.++..+..++++
T Consensus 145 ---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~-----------~~~~~~~~~~~~~~~~~~ 204 (317)
T TIGR01181 145 ---------APSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQF-----------PEKLIPLMITNALAGKPL 204 (317)
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCC-----------cccHHHHHHHHHhcCCCc
Confidence 255689999999999999988888999999999999999754 124677888888888888
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccc
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (390)
++++++++.++|+|++|+|+++..++++. ..+++||++++ +.+|+.|+++++.+.++.+........
T Consensus 205 ~~~~~g~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~~~~-~~~s~~~~~~~i~~~~~~~~~~~~~~~---------- 271 (317)
T TIGR01181 205 PVYGDGQQVRDWLYVEDHCRAIYLVLEKG--RVGETYNIGGG-NERTNLEVVETILELLGKDEDLITHVE---------- 271 (317)
T ss_pred eEeCCCceEEeeEEHHHHHHHHHHHHcCC--CCCceEEeCCC-CceeHHHHHHHHHHHhCCCcccccccC----------
Confidence 88888889999999999999999999875 35689999997 799999999999999986432111100
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
........+.+|++|+++.|||+|+++++++++++++||+++.
T Consensus 272 --~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 272 --DRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred --CCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 0111223446899999999999999999999999999998764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-42 Score=319.96 Aligned_cols=308 Identities=18% Similarity=0.234 Sum_probs=227.4
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc--cccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH--LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
+...++|+||||||+||||++|+++|+++ |++|++++|+.+.... +.... ....+++++.+|++|.+.+.+++++
T Consensus 5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (342)
T PLN02214 5 VASPAGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELE--GGKERLILCKADLQDYEALKAAIDG 81 (342)
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhh--CCCCcEEEEecCcCChHHHHHHHhc
Confidence 33456789999999999999999999999 9999999997653211 11100 0123688999999999999999999
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecc-cccccccC---CCCCCCCCCCCCcccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC-EVYGKTIG---SFLPKDSPLRQDPAYY 164 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~-~vy~~~~~---~~~~e~~~~~~~~~~~ 164 (390)
+|+|||+|+.. ..++...++.|+.++.+++++|++.+ ++|||+||. .+||.... .+++|+....
T Consensus 82 ~d~Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~------ 150 (342)
T PLN02214 82 CDGVFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSD------ 150 (342)
T ss_pred CCEEEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCC------
Confidence 99999999864 23567889999999999999999998 899999996 68975332 2344443211
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
......|.+.|+.+|..+|.+++.+.++++++++++||+++|||+... . ....+..++. .
T Consensus 151 ----------~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~-------~--~~~~~~~~~~-~ 210 (342)
T PLN02214 151 ----------LDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP-------T--INASLYHVLK-Y 210 (342)
T ss_pred ----------hhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC-------C--CCchHHHHHH-H
Confidence 001123567899999999999999988889999999999999997641 1 1122333332 3
Q ss_pred hcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc
Q 016370 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324 (390)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~ 324 (390)
..+.... .+ ++.++||||+|+|++++.+++++. .++.||+++. ..++.|+++.+.+.++... .+....
T Consensus 211 ~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~~~~--~~g~yn~~~~--~~~~~el~~~i~~~~~~~~----~~~~~~- 278 (342)
T PLN02214 211 LTGSAKT-YA--NLTQAYVDVRDVALAHVLVYEAPS--ASGRYLLAES--ARHRGEVVEILAKLFPEYP----LPTKCK- 278 (342)
T ss_pred HcCCccc-CC--CCCcCeeEHHHHHHHHHHHHhCcc--cCCcEEEecC--CCCHHHHHHHHHHHCCCCC----CCCCCc-
Confidence 3444332 33 457899999999999999999864 4568999873 7899999999999986321 111100
Q ss_pred CCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 325 VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
...........+|++|++ +|||+| .+++|+|+++++|+++.
T Consensus 279 -------~~~~~~~~~~~~d~~k~~-~LG~~p-~~lee~i~~~~~~~~~~ 319 (342)
T PLN02214 279 -------DEKNPRAKPYKFTNQKIK-DLGLEF-TSTKQSLYDTVKSLQEK 319 (342)
T ss_pred -------cccCCCCCccccCcHHHH-HcCCcc-cCHHHHHHHHHHHHHHc
Confidence 000122334568999997 699999 59999999999999864
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=318.98 Aligned_cols=296 Identities=18% Similarity=0.227 Sum_probs=217.4
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC---hhH-HHHhhc-----cc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH---DSR-LEGLIK-----MA 90 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d---~~~-~~~~~~-----~~ 90 (390)
||||||+||||++|+++|+++ |++++++.|+....... ..+..+|+.| .+. +..++. ++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~-g~~~v~~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKF-----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC-CCceEEEecCCCcchHH-----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 899999999999999999999 89766665543221110 1122345544 333 344432 59
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
|+|||+|+..+.. ..++...++.|+.++.+|+++|++.+.+|||+||.++||.....+.+|+.+.
T Consensus 70 d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~------------- 134 (308)
T PRK11150 70 EAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYE------------- 134 (308)
T ss_pred cEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCC-------------
Confidence 9999999876533 2245567899999999999999998877999999999997644445554433
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
.|.+.|+.+|..+|++++.++...+++++++||+++|||+.. +......++..+..++.++.++
T Consensus 135 ---------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 198 (308)
T PRK11150 135 ---------KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREG-------HKGSMASVAFHLNNQLNNGENP 198 (308)
T ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCC-------CCCccchhHHHHHHHHhcCCCC
Confidence 256689999999999999998778999999999999999764 1122334555666777777765
Q ss_pred EEe-cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 251 KLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 251 ~~~-~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
.+. |++...++|+|++|+|++++.+++.. .+++||++++ +.+|+.|+++.+.+.++.. .....+.+...
T Consensus 199 ~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~---~~~~yni~~~-~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~----- 268 (308)
T PRK11150 199 KLFEGSENFKRDFVYVGDVAAVNLWFWENG---VSGIFNCGTG-RAESFQAVADAVLAYHKKG-EIEYIPFPDKL----- 268 (308)
T ss_pred EEecCCCceeeeeeeHHHHHHHHHHHHhcC---CCCeEEcCCC-CceeHHHHHHHHHHHhCCC-cceeccCcccc-----
Confidence 555 55677899999999999999998864 3579999997 7999999999999998842 11111111100
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccc-cCHHHHHHHHHHHHHH
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPK-TSLWDLLESTLTYQHR 373 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~~l~~~~~~~~~ 373 (390)
.........+|++|+++ +||+|+ .+++++|+++++|+.+
T Consensus 269 ----~~~~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~~~~~~~ 308 (308)
T PRK11150 269 ----KGRYQAFTQADLTKLRA-AGYDKPFKTVAEGVAEYMAWLNR 308 (308)
T ss_pred ----ccccceecccCHHHHHh-cCCCCCCCCHHHHHHHHHHHhhC
Confidence 00112244689999975 799987 4999999999999863
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=318.31 Aligned_cols=320 Identities=20% Similarity=0.310 Sum_probs=236.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih 95 (390)
|+||||||+||||++|++.|+++ |++|++++|..................++.++.+|+.|.+.+..++. ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC-CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 68999999999999999999999 99999998653221111000000012357789999999999999887 4999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
+|+.........++...+..|+.++.+++++|++.+ ++||++||.++||.....+++|+.+..
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~---------------- 143 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTG---------------- 143 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCC----------------
Confidence 998765433344567788999999999999999998 899999999999876555566665531
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC--CCeE
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR--QPLK 251 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 251 (390)
.|.+.|+.+|..+|.+++.+++.. +++++++|++.+|||......+.+ +......++.. +.++..+ .++.
T Consensus 144 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 216 (338)
T PRK10675 144 -----TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGED-PQGIPNNLMPY-IAQVAVGRRDSLA 216 (338)
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccC-CCCChhHHHHH-HHHHHhcCCCceE
Confidence 255689999999999999987654 799999999999998643211110 00001123333 3344433 2355
Q ss_pred Eec------CCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc
Q 016370 252 LVD------GGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324 (390)
Q Consensus 252 ~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~ 324 (390)
+++ ++.+.++|+|++|+|++++.+++... ...+++||++++ +.+|+.|+++.+.+.+|.+......+.
T Consensus 217 ~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~---- 291 (338)
T PRK10675 217 IFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAG-VGSSVLDVVNAFSKACGKPVNYHFAPR---- 291 (338)
T ss_pred EeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCC-CceeHHHHHHHHHHHhCCCCCeeeCCC----
Confidence 544 56788999999999999999998521 123579999997 799999999999999996533221111
Q ss_pred CCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 325 VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
.........+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 292 ---------~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~~ 333 (338)
T PRK10675 292 ---------REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_pred ---------CCCchhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhhh
Confidence 001223456899999999999999999999999999998863
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=318.23 Aligned_cols=317 Identities=18% Similarity=0.262 Sum_probs=226.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+++++|+||||||+||||++|+++|+++ |++|+++.|+.................+++++.+|++|.+.+..+++++|+
T Consensus 5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 83 (338)
T PLN00198 5 TPTGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDL 83 (338)
T ss_pred cCCCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCE
Confidence 5788899999999999999999999999 999998888754322110000000013688999999999999999999999
Q ss_pred EEEeccccCCccccCChh-HHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccccccccc----CCCCCCCCCCCCCccccc
Q 016370 93 TINLAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTI----GSFLPKDSPLRQDPAYYV 165 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~~~----~~~~~e~~~~~~~~~~~~ 165 (390)
|||+|+... ....++. ..++.|+.++.++++++.+. + ++|||+||.++|+... +.+.+|+.... . ..
T Consensus 84 vih~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~-~---~~ 157 (338)
T PLN00198 84 VFHVATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTD-V---EF 157 (338)
T ss_pred EEEeCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCc-h---hh
Confidence 999998642 2223443 45689999999999999876 4 8999999999998542 22333321000 0 00
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
.. ....|.+.|+.+|.++|.+++.+++.++++++++||+++|||+... ..+.++. ++..+.
T Consensus 158 ~~---------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~---------~~~~~~~-~~~~~~ 218 (338)
T PLN00198 158 LT---------SEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTS---------DIPSSLS-LAMSLI 218 (338)
T ss_pred hh---------hcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccC---------CCCCcHH-HHHHHH
Confidence 00 0113667899999999999999988889999999999999998641 1112222 233555
Q ss_pred cCCCeEEec-CCcc----eeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCC
Q 016370 246 RRQPLKLVD-GGQS----QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320 (390)
Q Consensus 246 ~~~~~~~~~-~~~~----~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~ 320 (390)
.+.++.+.| ++.+ .++|+||+|+|++++.+++... .++.|+.++ ..+|+.++++.+.+.++... . +.
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~--~~~~~~~~~--~~~s~~el~~~i~~~~~~~~-~---~~ 290 (338)
T PLN00198 219 TGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKES--ASGRYICCA--ANTSVPELAKFLIKRYPQYQ-V---PT 290 (338)
T ss_pred cCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcC--cCCcEEEec--CCCCHHHHHHHHHHHCCCCC-C---Cc
Confidence 666666554 2222 3799999999999999998753 345785444 47899999999998876321 1 00
Q ss_pred CcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.... . .......+|.+|+++ +||+|+++++|+|+++++||+++
T Consensus 291 ~~~~---------~-~~~~~~~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~ 333 (338)
T PLN00198 291 DFGD---------F-PSKAKLIISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAK 333 (338)
T ss_pred cccc---------c-CCCCccccChHHHHh-CCceecCcHHHHHHHHHHHHHHc
Confidence 0000 0 112345689999976 69999999999999999999864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=315.25 Aligned_cols=298 Identities=23% Similarity=0.316 Sum_probs=231.0
Q ss_pred EEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEEecc
Q 016370 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTINLAA 98 (390)
Q Consensus 21 lItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih~a~ 98 (390)
||||||||||++|++.|+++ |++|+++.+. ..+|+.|.+.+..+++. +|+|||||+
T Consensus 1 lItGa~GfiG~~l~~~L~~~-g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL-GFTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhC-CCcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 69999999999999999998 8887765432 14899999999998874 899999999
Q ss_pred ccCC-ccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 99 ICTP-ADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 99 ~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
..+. ..+..++...++.|+.++.+|+++|++.+ ++|||+||..||+.....+.+|+.+...
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~----------------- 121 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTG----------------- 121 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccC-----------------
Confidence 8643 22345677889999999999999999999 8999999999999766666666553210
Q ss_pred CCCCCCc-hhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE-ec
Q 016370 177 SIEKQRW-SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL-VD 254 (390)
Q Consensus 177 ~~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 254 (390)
...|.+ .|+.+|..+|++++.+.+..+++++++||+.+|||+..+... .....+.++..++.....+.++.+ ++
T Consensus 122 -~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~ 197 (306)
T PLN02725 122 -PPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPE---NSHVIPALIRRFHEAKANGAPEVVVWG 197 (306)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCC---CCcccHHHHHHHHHHhhcCCCeEEEcC
Confidence 012333 599999999999999888889999999999999997542110 011233444455555566777766 67
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
++.+.++|+|++|+|+++..+++... ..+.||++++ +.+|+.|+++.+.+.++.+......+. .
T Consensus 198 ~g~~~~~~i~v~Dv~~~~~~~~~~~~--~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~-------------~ 261 (306)
T PLN02725 198 SGSPLREFLHVDDLADAVVFLMRRYS--GAEHVNVGSG-DEVTIKELAELVKEVVGFEGELVWDTS-------------K 261 (306)
T ss_pred CCCeeeccccHHHHHHHHHHHHhccc--cCcceEeCCC-CcccHHHHHHHHHHHhCCCCceeecCC-------------C
Confidence 88899999999999999999998753 4568999997 799999999999999985432211110 0
Q ss_pred CCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 335 YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 335 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
........+|++|++ .|||.|+++++++|+++++|++++.++.
T Consensus 262 ~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 304 (306)
T PLN02725 262 PDGTPRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYLENYETG 304 (306)
T ss_pred CCcccccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHHhhhhcc
Confidence 111234568999996 6999999999999999999999988753
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=300.95 Aligned_cols=317 Identities=19% Similarity=0.268 Sum_probs=259.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
+++||||||.||||+|.+.+|+++ ||.|++++..... ......... ..+++.++++|++|.+.++++|+. +
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~-gy~v~~vDNl~n~~~~sl~r~~~l~~--~~~~v~f~~~Dl~D~~~L~kvF~~~~f 78 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR-GYGVVIVDNLNNSYLESLKRVRQLLG--EGKSVFFVEGDLNDAEALEKLFSEVKF 78 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC-CCcEEEEecccccchhHHHHHHHhcC--CCCceEEEEeccCCHHHHHHHHhhcCC
Confidence 478999999999999999999999 9999999985432 222222211 147899999999999999999986 9
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|.|+|+|+......+.++|..++..|+.||.+|++.+++++ +.+||.||+.|||.....|++|+.|..
T Consensus 79 d~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~----------- 147 (343)
T KOG1371|consen 79 DAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTD----------- 147 (343)
T ss_pred ceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCC-----------
Confidence 99999999999888999999999999999999999999999 999999999999999999999988875
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecC--CCCCCCCCCCCCCCCchhhHHHHHHHH---
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG--PRMDFIPGIDGPSEGVPRVLACFSNNL--- 244 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 244 (390)
.|.++|+.+|...|+.+..+....++.+++||.++++| |.......+ .....++++...+.+
T Consensus 148 ----------~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p---~~~~nnl~p~v~~vaigr 214 (343)
T KOG1371|consen 148 ----------QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAP---LGIPNNLLPYVFQVAIGR 214 (343)
T ss_pred ----------CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCC---ccCcccccccccchhhcc
Confidence 26778999999999999999988899999999999999 655432221 111122222222222
Q ss_pred -----hcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcccCCccc
Q 016370 245 -----LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318 (390)
Q Consensus 245 -----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~ 318 (390)
.-+.+.... +|...+++||+-|+|+.+..++..... ..-++||++++ ...++.+++.+++++.|.+.++...
T Consensus 215 ~~~l~v~g~d~~t~-dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg-~g~~V~~lv~a~~k~~g~~~k~~~v 292 (343)
T KOG1371|consen 215 RPNLQVVGRDYTTI-DGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTG-KGSSVLELVTAFEKALGVKIKKKVV 292 (343)
T ss_pred cccceeecCccccc-CCCeeecceeeEehHHHHHHHhhccccchheeeEeecCC-CCccHHHHHHHHHHHhcCCCCcccc
Confidence 223344443 568899999999999999999998653 23369999997 7999999999999999988766655
Q ss_pred CCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+. +.++......+.+++.++|||+|.+++++++++++.|..++.
T Consensus 293 ~~-------------R~gdv~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np 336 (343)
T KOG1371|consen 293 PR-------------RNGDVAFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNP 336 (343)
T ss_pred CC-------------CCCCceeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCC
Confidence 43 235666788999999999999999999999999999998764
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=311.79 Aligned_cols=310 Identities=15% Similarity=0.199 Sum_probs=228.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+||||||+||||++|++.|+++ |++|+++.|+............ .....+++++.+|++|.+.+.++++++|+|||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 589999999999999999999999 9999998887653322111000 00124688999999999999999999999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccccccccc-----CCCCCCCCCCCCCcccccccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTI-----GSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~~~-----~~~~~e~~~~~~~~~~~~~~e 168 (390)
+|+.........++...+++|+.++.+++++|.+. + ++||++||..+|+... ..+++|+.+..+..
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~------- 156 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSF------- 156 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhH-------
Confidence 99976433333455678899999999999999885 4 7999999988776432 23345554432110
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
...+.+.|+.+|..+|.+++.+.+.++++++++||+++|||+.. +.. .+...++..+..++
T Consensus 157 ---------~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~-------~~~---~~~~~~i~~~~~~~ 217 (325)
T PLN02989 157 ---------AEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ-------PTL---NFSVAVIVELMKGK 217 (325)
T ss_pred ---------hcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC-------CCC---CchHHHHHHHHcCC
Confidence 01134579999999999999998888999999999999999865 111 13334455555555
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
++. + .+.++|+|++|+|++++.+++.+. .+++||+++ ..+|+.|+++.+.+.++... ......
T Consensus 218 ~~~--~--~~~r~~i~v~Dva~a~~~~l~~~~--~~~~~ni~~--~~~s~~ei~~~i~~~~~~~~----~~~~~~----- 280 (325)
T PLN02989 218 NPF--N--TTHHRFVDVRDVALAHVKALETPS--ANGRYIIDG--PVVTIKDIENVLREFFPDLC----IADRNE----- 280 (325)
T ss_pred CCC--C--CcCcCeeEHHHHHHHHHHHhcCcc--cCceEEEec--CCCCHHHHHHHHHHHCCCCC----CCCCCC-----
Confidence 432 2 345799999999999999998764 356899965 48999999999999987321 110000
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.........+..|++|+++ |||.|+++++++|+++++|+++.
T Consensus 281 ---~~~~~~~~~~~~~~~k~~~-lg~~p~~~l~~gi~~~~~~~~~~ 322 (325)
T PLN02989 281 ---DITELNSVTFNVCLDKVKS-LGIIEFTPTETSLRDTVLSLKEK 322 (325)
T ss_pred ---CcccccccCcCCCHHHHHH-cCCCCCCCHHHHHHHHHHHHHHh
Confidence 0011122356789999975 99999999999999999998753
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=305.62 Aligned_cols=300 Identities=21% Similarity=0.258 Sum_probs=228.5
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----cccEEE
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----MADLTI 94 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----~~d~Vi 94 (390)
|||||||||||+++++.|+++ |+ +|++++|...... +... ....+.+|+.+.+.++.+.. ++|+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~-g~~~v~~~~~~~~~~~-~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER-GITDILVVDNLRDGHK-FLNL-------ADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc-CCceEEEEecCCCchh-hhhh-------hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 699999999999999999999 87 7888877653221 1110 12356788888887777664 699999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
|+|+.... ...++...+++|+.++.+++++|++.+.+|||+||.++|+.... +..|+.+.
T Consensus 72 h~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~~~e~~~~----------------- 131 (314)
T TIGR02197 72 HQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-GFREGREL----------------- 131 (314)
T ss_pred ECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-CcccccCc-----------------
Confidence 99997642 33466778899999999999999998888999999999987543 23333221
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhh--hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGA--ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
..|.+.|+.+|..+|.+++.+.. ..+++++++|++.+|||+... ......++..++..+..+.++.+
T Consensus 132 ----~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 200 (314)
T TIGR02197 132 ----ERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYH-------KGKMASVAFHLFNQIKAGGNVKL 200 (314)
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCC-------CCCcccHHHHHHHHHhcCCCeEE
Confidence 12567899999999999987542 236799999999999998641 12234567778888888888776
Q ss_pred e------cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 253 V------DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 253 ~------~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
. ++|++.++|+|++|+++++..++.. . .+++||++++ +.+|+.|+++.+.+.+|.+......+.+....
T Consensus 201 ~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~--~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~- 275 (314)
T TIGR02197 201 FKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-G--VSGIFNLGTG-RARSFNDLADAVFKALGKDEKIEYIPMPEALR- 275 (314)
T ss_pred ecCccccCCCCceeeeEEHHHHHHHHHHHHhc-c--cCceEEcCCC-CCccHHHHHHHHHHHhCCCCcceeccCccccc-
Confidence 5 4577789999999999999999987 2 4679999997 79999999999999999654322222221100
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 372 (390)
........+|++|+++.|||.|+++++++|+++++|+.
T Consensus 276 --------~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 276 --------GKYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred --------cccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 00112345899999999999999999999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=310.25 Aligned_cols=322 Identities=18% Similarity=0.257 Sum_probs=224.7
Q ss_pred CCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 10 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
|..+.-.+|+||||||+||||++++++|+++ |++|++++|+......+..... ...+++++.+|+.+.+.+.+++++
T Consensus 3 ~~~~~~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (353)
T PLN02896 3 LEGRESATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEGSFDEAVKG 79 (353)
T ss_pred ccccccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHHHHHHHHcC
Confidence 4444556789999999999999999999999 9999999987654332221100 124688999999999999999999
Q ss_pred ccEEEEeccccCCcc--ccCChhHHH-----HHhhhhHHHHHHHHHhCC--CcEEEeecccccccccC-----CCCCCCC
Q 016370 90 ADLTINLAAICTPAD--YNTRPLDTI-----YSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIG-----SFLPKDS 155 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~--~~~~~~~~~-----~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~-----~~~~e~~ 155 (390)
+|+|||+|+...... ...++...+ +.|+.++.+++++|++.+ ++|||+||.++||.... .+++|+.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~ 159 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC 159 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc
Confidence 999999999875432 223444433 445699999999998764 79999999999985421 2333331
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+.+. ++ ..+...+.+.|+.+|.++|.+++.+++.++++++++||+++|||+... .++.
T Consensus 160 ~~p~-------~~------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~---------~~~~ 217 (353)
T PLN02896 160 QTPI-------DH------VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTP---------SVPS 217 (353)
T ss_pred CCcH-------HH------hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCC---------CCCc
Confidence 1100 00 000112456799999999999999998889999999999999997641 1233
Q ss_pred hHHHHHHHHhcCCCe--EEecC---CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhh
Q 016370 236 VLACFSNNLLRRQPL--KLVDG---GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~--~~~~~---~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g 310 (390)
++..+...+ .+... ...+. ..+.++|||++|+|++++.+++.+. .++.|++++ +.+|+.|+++.+.+.++
T Consensus 218 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~--~~~~~~~~~--~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 218 SIQVLLSPI-TGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTK--AEGRYICCV--DSYDMSELINHLSKEYP 292 (353)
T ss_pred hHHHHHHHh-cCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCC--cCccEEecC--CCCCHHHHHHHHHHhCC
Confidence 343333322 33221 12211 1124799999999999999998753 345787654 58999999999999887
Q ss_pred cccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
.......... ....+ ....+|.+|++ +|||+|+++++++|+++++|++++.
T Consensus 293 ~~~~~~~~~~------------~~~~~-~~~~~~~~~~~-~lGw~p~~~l~~~i~~~~~~~~~~~ 343 (353)
T PLN02896 293 CSNIQVRLDE------------EKRGS-IPSEISSKKLR-DLGFEYKYGIEEIIDQTIDCCVDHG 343 (353)
T ss_pred CCCccccccc------------cccCc-cccccCHHHHH-HcCCCccCCHHHHHHHHHHHHHHCC
Confidence 3211100000 00011 12356899986 5999999999999999999998754
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=306.73 Aligned_cols=306 Identities=17% Similarity=0.215 Sum_probs=221.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+||||||+||||++|+++|+++ |++|++++|+............ .....+++++.+|+.|++.+..+++++|+|||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 579999999999999999999999 9999999987643221111000 00124789999999999999999999999999
Q ss_pred eccccCCccccCChh-HHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccc--cccccc---CCCCCCCCCCCCCccccccc
Q 016370 96 LAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCE--VYGKTI---GSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~--vy~~~~---~~~~~e~~~~~~~~~~~~~~ 167 (390)
+|+.... ...++. ..+++|+.++.+++++|.+. + +||||+||.+ +|+... ..+++|+.+..+.
T Consensus 83 ~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~------- 153 (322)
T PLN02662 83 TASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPA------- 153 (322)
T ss_pred eCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChh-------
Confidence 9987532 223444 67889999999999999887 6 8999999976 465321 1234444332210
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
......+.|+.+|..+|.+++.+.++++++++++||+.+|||+... . ......++..+..+
T Consensus 154 ---------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~-------~---~~~~~~~~~~~~~~ 214 (322)
T PLN02662 154 ---------FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQP-------T---LNTSAEAILNLING 214 (322)
T ss_pred ---------HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCC-------C---CCchHHHHHHHhcC
Confidence 0001234799999999999999988889999999999999997541 1 01233344455555
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS 327 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~ 327 (390)
.+. . +.+.++|||++|+|++++.+++.+. .++.||+++ ..+|+.|+++.+.+.++... .+....
T Consensus 215 ~~~--~--~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~g--~~~s~~e~~~~i~~~~~~~~----~~~~~~---- 278 (322)
T PLN02662 215 AQT--F--PNASYRWVDVRDVANAHIQAFEIPS--ASGRYCLVE--RVVHYSEVVKILHELYPTLQ----LPEKCA---- 278 (322)
T ss_pred Ccc--C--CCCCcCeEEHHHHHHHHHHHhcCcC--cCCcEEEeC--CCCCHHHHHHHHHHHCCCCC----CCCCCC----
Confidence 432 2 2457899999999999999999864 345789975 48999999999999876321 111000
Q ss_pred ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 328 KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 328 ~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
. .........+|++|++ .|||++ ++++++|+++++||+++
T Consensus 279 ----~-~~~~~~~~~~d~~k~~-~lg~~~-~~~~~~l~~~~~~~~~~ 318 (322)
T PLN02662 279 ----D-DKPYVPTYQVSKEKAK-SLGIEF-IPLEVSLKDTVESLKEK 318 (322)
T ss_pred ----C-ccccccccccChHHHH-HhCCcc-ccHHHHHHHHHHHHHHc
Confidence 0 0012234579999997 599997 59999999999999864
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=302.69 Aligned_cols=304 Identities=30% Similarity=0.471 Sum_probs=244.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc-cEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA-DLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~-d~Vih~ 96 (390)
|+|||||||||||++|++.|+++ |++|++++|......... ..+.++.+|+.+.+.+..++..+ |+|||+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~ 71 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA-GHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPDAVIHL 71 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhC-CCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence 45999999999999999999999 999999999776544322 36788999999998888888887 999999
Q ss_pred ccccCCccccC-ChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccc-cCCCCCCCC-CCCCCccccccccCCCC
Q 016370 97 AAICTPADYNT-RPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKT-IGSFLPKDS-PLRQDPAYYVLKEDASP 172 (390)
Q Consensus 97 a~~~~~~~~~~-~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~-~~~~~~e~~-~~~~~~~~~~~~e~~~~ 172 (390)
|+......... ++...+..|+.++.+++++|++.+ +++||+||.++|+.. ...+++|+. +.
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~--------------- 136 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPP--------------- 136 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCC---------------
Confidence 99886543333 456789999999999999999977 999999998877765 233556652 32
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC-eE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP-LK 251 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (390)
.|.+.|+.+|+++|..++.+...++++++++||+.+|||+... . ....++..++..+..+.+ +.
T Consensus 137 -------~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~-------~-~~~~~~~~~~~~~~~~~~~~~ 201 (314)
T COG0451 137 -------RPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKP-------D-LSSGVVSAFIRQLLKGEPIIV 201 (314)
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCC-------C-CCcCcHHHHHHHHHhCCCcce
Confidence 2555899999999999999988789999999999999998762 1 111355556667777776 66
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCC-cccHHHHHHHHHHHhhcccCC-cccCCCcccCCccc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHN-EVTVRQLAEMMTEVYAKVSGE-AALEEPTVDVSSKE 329 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~-~~s~~~l~~~i~~~~g~~~~~-~~~~~~~~~~~~~~ 329 (390)
+.+++...++++|++|+++++..+++++. .+ +||++++ . ..++.++++.+.+.+|..... ...+.
T Consensus 202 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~-~~ni~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------- 268 (314)
T COG0451 202 IGGDGSQTRDFVYVDDVADALLLALENPD--GG-VFNIGSG-TAEITVRELAEAVAEAVGSKAPLIVYIPL--------- 268 (314)
T ss_pred EeCCCceeEeeEeHHHHHHHHHHHHhCCC--Cc-EEEeCCC-CCcEEHHHHHHHHHHHhCCCCcceeecCC---------
Confidence 66778888999999999999999999875 33 9999996 6 899999999999999976543 11110
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
...........+|.+|+++.|||.|+.++++++.++++|+....
T Consensus 269 --~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 269 --GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred --CCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 11223445668999999999999999999999999999998764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=305.05 Aligned_cols=314 Identities=20% Similarity=0.285 Sum_probs=220.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.|+||||||+||||++|+++|+++ |++|++++|+.+....+..... .....+++++.+|+.|.+.+.++++++|+|||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC-CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 468999999999999999999999 9999999987644332211100 00113588999999999999999999999999
Q ss_pred eccccCCccccCCh-hHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccC-CC-CCCCCCCCCCccccccccCC
Q 016370 96 LAAICTPADYNTRP-LDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIG-SF-LPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 96 ~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~-~~-~~e~~~~~~~~~~~~~~e~~ 170 (390)
+|+.... ...++ ...+++|+.++.+++++|++.+ ++|||+||.++|+.... .+ ++|+.....+
T Consensus 84 ~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~---------- 151 (351)
T PLN02650 84 VATPMDF--ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLD---------- 151 (351)
T ss_pred eCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchh----------
Confidence 9986532 22233 3678899999999999999876 69999999987765321 12 2333211000
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
...+...|.+.|+.+|..+|.+++.++++++++++++||+++|||+... .....++..+ . ...+...
T Consensus 152 ---~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~--------~~~~~~~~~~-~-~~~~~~~ 218 (351)
T PLN02650 152 ---FCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIST--------SMPPSLITAL-S-LITGNEA 218 (351)
T ss_pred ---hhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCC--------CCCccHHHHH-H-HhcCCcc
Confidence 0001122456899999999999999998899999999999999997641 0111222221 1 1223222
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccc
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (390)
. .+. .+.++|+|++|+|++++.+++.+. .++.|+ +++ +.+|+.|+++++.+.++.... +....
T Consensus 219 ~-~~~-~~~r~~v~V~Dva~a~~~~l~~~~--~~~~~i-~~~-~~~s~~el~~~i~~~~~~~~~----~~~~~------- 281 (351)
T PLN02650 219 H-YSI-IKQGQFVHLDDLCNAHIFLFEHPA--AEGRYI-CSS-HDATIHDLAKMLREKYPEYNI----PARFP------- 281 (351)
T ss_pred c-cCc-CCCcceeeHHHHHHHHHHHhcCcC--cCceEE-ecC-CCcCHHHHHHHHHHhCcccCC----CCCCC-------
Confidence 1 222 235799999999999999998753 345785 454 579999999999998763211 10000
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
. .........+|++|+ ++|||+|+++++++|+++++|+++..-
T Consensus 282 -~-~~~~~~~~~~d~~k~-~~lG~~p~~~l~egl~~~i~~~~~~~~ 324 (351)
T PLN02650 282 -G-IDEDLKSVEFSSKKL-TDLGFTFKYSLEDMFDGAIETCREKGL 324 (351)
T ss_pred -C-cCcccccccCChHHH-HHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 0 001223456789997 579999999999999999999987553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=299.33 Aligned_cols=315 Identities=23% Similarity=0.392 Sum_probs=237.3
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEEe
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTINL 96 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih~ 96 (390)
|||||||+|+||++++++|+++ |++|++++|.............. ..+++++.+|+.+.+.+.++++ ++|+|||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~-g~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES-GHEVVVLDNLSNGSPEALKRGER--ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC-CCeEEEEeCCCccchhhhhhhcc--ccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 5899999999999999999998 99999887643321111110000 1257789999999999999987 49999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|+.........++...+..|+.++.+++++|.+.+ +++|++||.++|+.....+++|+.+..
T Consensus 78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~----------------- 140 (328)
T TIGR01179 78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLG----------------- 140 (328)
T ss_pred ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCC-----------------
Confidence 99875444445667788899999999999999988 899999999999876555566665542
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhh-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-cCCCeEEe
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-RRQPLKLV 253 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 253 (390)
|.+.|+.+|..+|.+++.++++ .+++++++||+.+|||...+..+.. ......++..+..... ...++.+.
T Consensus 141 -----~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (328)
T TIGR01179 141 -----PINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGED--PPGITHLIPYACQVAVGKRDKLTIF 213 (328)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccC--CcccchHHHHHHHHHHhCCCCeEEe
Confidence 5568999999999999998776 7999999999999999754221111 1112345555554443 33444443
Q ss_pred c------CCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 254 D------GGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 254 ~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+ ++...++|||++|+|+++..+++... ...+++||++++ +.+|+.|+++.+.+.+|.+......+..
T Consensus 214 ~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~ei~~~~~~~~g~~~~~~~~~~~----- 287 (328)
T TIGR01179 214 GTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYG-QGFSVLEVIEAFKKVSGVDFPVELAPRR----- 287 (328)
T ss_pred CCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCC-CcccHHHHHHHHHHHhCCCcceEeCCCC-----
Confidence 3 45678999999999999999997531 134689999997 7999999999999999875433211110
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccC-HHHHHHHHHHHHHHh
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTS-LWDLLESTLTYQHRT 374 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~-~~~~l~~~~~~~~~~ 374 (390)
.........|++|++++|||+|+++ ++++|+++++|+++|
T Consensus 288 --------~~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 288 --------PGDPASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred --------CccccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 0112244679999999999999997 999999999999875
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=298.78 Aligned_cols=306 Identities=16% Similarity=0.239 Sum_probs=220.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+||||||+||||++++++|+++ |++|+++.|+............ .....+++++.+|++|.+.+.++++++|+|||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 579999999999999999999999 9999998887653322111100 00124689999999999999999999999999
Q ss_pred eccccCCccccCChh-HHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccccc--cccc---CCCCCCCCCCCCCccccccc
Q 016370 96 LAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVY--GKTI---GSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy--~~~~---~~~~~e~~~~~~~~~~~~~~ 167 (390)
+|+.... ...++. ..++.|+.++.+++++|++. + +||||+||.++| +... +.+++|+.+..+.
T Consensus 84 ~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~------- 154 (322)
T PLN02986 84 TASPVFF--TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPS------- 154 (322)
T ss_pred eCCCcCC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChH-------
Confidence 9997532 122333 46889999999999999986 5 899999998765 3221 1223333322110
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
....+.+.|+.+|..+|.+++.+.++++++++++||+.+|||... |.. .+...++..+..+
T Consensus 155 ---------~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~-------~~~---~~~~~~~~~~~~g 215 (322)
T PLN02986 155 ---------LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQ-------PTL---NFSVELIVDFING 215 (322)
T ss_pred ---------HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCC-------CCC---CccHHHHHHHHcC
Confidence 001245679999999999999998888999999999999999754 111 1122344455556
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS 327 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~ 327 (390)
.++ .+ .+.++|||++|+|++++.+++++. .++.||+++ +.+|+.|+++++.+.++... .+.. ....
T Consensus 216 ~~~--~~--~~~~~~v~v~Dva~a~~~al~~~~--~~~~yni~~--~~~s~~e~~~~i~~~~~~~~----~~~~--~~~~ 281 (322)
T PLN02986 216 KNL--FN--NRFYRFVDVRDVALAHIKALETPS--ANGRYIIDG--PIMSVNDIIDILRELFPDLC----IADT--NEES 281 (322)
T ss_pred CCC--CC--CcCcceeEHHHHHHHHHHHhcCcc--cCCcEEEec--CCCCHHHHHHHHHHHCCCCC----CCCC--Cccc
Confidence 543 33 457899999999999999999864 345899955 48999999999999987311 1110 0000
Q ss_pred ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 328 KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 328 ~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
. .......+|++|++ +|||+|+ +++|+|+++++|+++.
T Consensus 282 -----~--~~~~~~~~d~~~~~-~lg~~~~-~l~e~~~~~~~~~~~~ 319 (322)
T PLN02986 282 -----E--MNEMICKVCVEKVK-NLGVEFT-PMKSSLRDTILSLKEK 319 (322)
T ss_pred -----c--ccccCCccCHHHHH-HcCCccc-CHHHHHHHHHHHHHHc
Confidence 0 00111248999985 5999997 9999999999999763
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=298.07 Aligned_cols=309 Identities=17% Similarity=0.222 Sum_probs=231.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+||||||+||||+++++.|+++ |++|++++|++.....+. ..+++++.+|+.|.+++.++++++|+|||+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a 72 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLE-------GLDVEIVEGDLRDPASLRKAVAGCRALFHVA 72 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccc-------cCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence 58999999999999999999999 999999999765433221 1368899999999999999999999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccc-cCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKT-IGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~-~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+... .+..++...++.|+.++.++++++++.+ +++|++||..+|+.. .+.+.+|+.+..+.
T Consensus 73 ~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~--------------- 135 (328)
T TIGR03466 73 ADYR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLD--------------- 135 (328)
T ss_pred eecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcc---------------
Confidence 8643 2345677889999999999999999988 899999999999863 33456666554321
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
.+.+.|+.+|..+|++++.+..+++++++++||+.+|||+... . .....++.....+...... +
T Consensus 136 ----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~---------~--~~~~~~~~~~~~~~~~~~~-~ 199 (328)
T TIGR03466 136 ----DMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIK---------P--TPTGRIIVDFLNGKMPAYV-D 199 (328)
T ss_pred ----cccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCC---------C--CcHHHHHHHHHcCCCceee-C
Confidence 1245799999999999999988789999999999999997541 0 1112233333333322222 2
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC------ccc
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS------SKE 329 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~------~~~ 329 (390)
..++|+|++|+|+++..++++.. .++.|++++ +.+|+.|+++.+.+.+|++......+.+..... ...
T Consensus 200 --~~~~~i~v~D~a~a~~~~~~~~~--~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (328)
T TIGR03466 200 --TGLNLVHVDDVAEGHLLALERGR--IGERYILGG--ENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALAR 273 (328)
T ss_pred --CCcceEEHHHHHHHHHHHHhCCC--CCceEEecC--CCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 34689999999999999998853 577898864 589999999999999997654443332210000 000
Q ss_pred ccCCCCC--------CCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 330 FYGEGYD--------DSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 330 ~~~~~~~--------~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
..+.... ......+|++|+++.|||+|+ +++++|+++++||+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 274 LTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRAN 325 (328)
T ss_pred hcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHh
Confidence 0000000 013557899999999999996 9999999999999864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=292.31 Aligned_cols=283 Identities=20% Similarity=0.220 Sum_probs=222.6
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEEe
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTINL 96 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih~ 96 (390)
||||||||||||++++++|+++ |++|++++|. .+|+.+.+.+.+++++ +|+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~-g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE-GRVVVALTSS----------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc-CCEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899999999999999999998 9999999884 3799999999999986 5999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
|+.........++...++.|+.++.+++++|++.+.+||++||.++|+.....+++|+.+..
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~------------------ 119 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATN------------------ 119 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCC------------------
Confidence 99765433445667788999999999999999888899999999999876555666665542
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
|.+.|+.+|..+|.+++.+ +++++++||+.+|||+.. ..++..++..+..++++.+.++
T Consensus 120 ----~~~~Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~------------~~~~~~~~~~~~~~~~~~~~~~- 178 (287)
T TIGR01214 120 ----PLNVYGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGG------------RNFVRTMLRLAGRGEELRVVDD- 178 (287)
T ss_pred ----CcchhhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCC------------CCHHHHHHHHhhcCCCceEecC-
Confidence 5568999999999999764 679999999999999742 1356667777777888887754
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD 336 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
+.++++|++|+|+++..+++.+. ..+++||++++ +.+|+.|+++.+.+.+|........+. ..............
T Consensus 179 -~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 253 (287)
T TIGR01214 179 -QIGSPTYAKDLARVIAALLQRLA-RARGVYHLANS-GQCSWYEFAQAIFEEAGADGLLLHPQE--VKPISSKEYPRPAR 253 (287)
T ss_pred -CCcCCcCHHHHHHHHHHHHhhcc-CCCCeEEEECC-CCcCHHHHHHHHHHHhCcccccccCce--eEeecHHHcCCCCC
Confidence 57899999999999999998753 35789999997 799999999999999997643222110 00000000111112
Q ss_pred CCCCCcCcHHHHHHhcCcccccCHHHHHHHHHH
Q 016370 337 DSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369 (390)
Q Consensus 337 ~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 369 (390)
......+|++|+++.||| +.++++++|+++++
T Consensus 254 ~~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~ 285 (287)
T TIGR01214 254 RPAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ 285 (287)
T ss_pred CCCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence 234567999999999999 55699999998764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=293.68 Aligned_cols=280 Identities=22% Similarity=0.290 Sum_probs=212.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
||||||||+|+||++|++.|.++ |++|+++.|. ..|+.|.+.+.++++. +|+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~-~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER-GYEVIATSRS----------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT-SEEEEEESTT----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhC-CCEEEEeCch----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 79999999999999999999998 8999999774 4889999999999986 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|||...+..+..++...+.+|+.++.+|+++|++.+.++||+||..||+...+.++.|+++.
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~------------------ 119 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPP------------------ 119 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS--------------------
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCC------------------
Confidence 99999888888999999999999999999999999999999999999998877777777765
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
+|.+.||.+|+.+|+.+++.. -..+|+|++.+||+... +++..++..+..++++.+..
T Consensus 120 ----~P~~~YG~~K~~~E~~v~~~~----~~~~IlR~~~~~g~~~~-------------~~~~~~~~~~~~~~~i~~~~- 177 (286)
T PF04321_consen 120 ----NPLNVYGRSKLEGEQAVRAAC----PNALILRTSWVYGPSGR-------------NFLRWLLRRLRQGEPIKLFD- 177 (286)
T ss_dssp ------SSHHHHHHHHHHHHHHHH-----SSEEEEEE-SEESSSSS-------------SHHHHHHHHHHCTSEEEEES-
T ss_pred ----CCCCHHHHHHHHHHHHHHHhc----CCEEEEecceecccCCC-------------chhhhHHHHHhcCCeeEeeC-
Confidence 377899999999999998754 37999999999999443 58888999999999999874
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCC--CCCceEEecCCCCcccHHHHHHHHHHHhhccc-CCcccCCCcccCCcccccC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPAR--ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS-GEAALEEPTVDVSSKEFYG 332 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~ 332 (390)
+..++.+|++|+|+++..++++... ...++||++++ +.+|+.|+++.+++.+|... .+.+.+... ..
T Consensus 178 -d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~-~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~--------~~ 247 (286)
T PF04321_consen 178 -DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGP-ERVSRYEFAEAIAKILGLDPELIKPVSSSE--------FP 247 (286)
T ss_dssp -SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---B-S-EEHHHHHHHHHHHHTHCTTEEEEESSTT--------ST
T ss_pred -CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecC-cccCHHHHHHHHHHHhCCCCceEEeccccc--------CC
Confidence 5689999999999999999998531 12489999997 79999999999999999876 222221111 11
Q ss_pred CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHH
Q 016370 333 EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371 (390)
Q Consensus 333 ~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~ 371 (390)
.....+....+|++|+++.||+++. +|+++|+++++-|
T Consensus 248 ~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 248 RAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQY 285 (286)
T ss_dssp TSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred CCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHHHh
Confidence 1223455778999999999999886 8999999998755
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=288.27 Aligned_cols=255 Identities=19% Similarity=0.257 Sum_probs=202.0
Q ss_pred EEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEecc
Q 016370 21 CMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAA 98 (390)
Q Consensus 21 lItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~ 98 (390)
|||||+||||++|+++|+++ | ++|+++++.+......... .....+++.+|++|++++.++++++|+|||+|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~-g~~~~Vr~~d~~~~~~~~~~~~----~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLER-GYIYEVRVLDRSPPPKFLKDLQ----KSGVKEYIQGDITDPESLEEALEGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHC-CCceEEEEcccccccccchhhh----cccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence 69999999999999999999 7 7899999876543311100 112344999999999999999999999999999
Q ss_pred ccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc-C-CCC--CCCCCCCCCccccccccCCCCc
Q 016370 99 ICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI-G-SFL--PKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 99 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~-~-~~~--~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
...... .......+++|+.||++|+++|++.+ +||||+||.++++... + ... +|+.|..
T Consensus 76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~--------------- 139 (280)
T PF01073_consen 76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP--------------- 139 (280)
T ss_pred cccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCccc---------------
Confidence 875422 34566799999999999999999999 9999999999998732 1 111 2333221
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhh---h--cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGA---E--NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~--~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
..+.+.|+.||..+|+++++... + ..+.+++|||+.||||+.. .+...+......+.
T Consensus 140 -----~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~-------------~~~~~~~~~~~~g~ 201 (280)
T PF01073_consen 140 -----SSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ-------------RLVPRLVKMVRSGL 201 (280)
T ss_pred -----ccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc-------------cccchhhHHHHhcc
Confidence 12566899999999999998764 2 2499999999999999875 34555666666676
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhC---C---CCCCCceEEecCCCCccc-HHHHHHHHHHHhhcccCC
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIEN---P---ARANGHIFNVGNPHNEVT-VRQLAEMMTEVYAKVSGE 315 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~---~---~~~~~~~~nv~~~~~~~s-~~~l~~~i~~~~g~~~~~ 315 (390)
.....|++....+++||+|+|.+++++++. + ....|++|+|+++ +++. +.|+++.+.+.+|.+.+.
T Consensus 202 ~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~-~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 202 FLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDG-EPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred cceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECC-CccCcHHHHHHHHHHHCCCCCCc
Confidence 666778888899999999999999988753 2 3457899999996 7998 999999999999976644
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=297.61 Aligned_cols=292 Identities=17% Similarity=0.264 Sum_probs=219.3
Q ss_pred CCCCEEEEE----cCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccc----ccCCCCCeeEEeCCCCChhHHHHh
Q 016370 15 IKPVTICMI----GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE----SQTGADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 15 ~~~~~vlIt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~i~~~~~D~~d~~~~~~~ 86 (390)
..+|+|||| |||||||++|++.|+++ ||+|++++|+......+.... ......+++++.+|+.| +..+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence 345789999 99999999999999999 999999999865422111000 00011368999999987 4444
Q ss_pred h--ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 87 I--KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 87 ~--~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
+ .++|+|||+++. +..++.+|+++|++.+ ++|||+||.++|+.....+..|+.+..
T Consensus 126 ~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~----- 184 (378)
T PLN00016 126 VAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVK----- 184 (378)
T ss_pred hccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCC-----
Confidence 4 469999998752 1346889999999999 899999999999976554555544432
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
| +. +|..+|.+++. .+++++++||+++|||+.. ..+...++.+
T Consensus 185 -----------------p---~~-sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~------------~~~~~~~~~~ 227 (378)
T PLN00016 185 -----------------P---KA-GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNN------------KDCEEWFFDR 227 (378)
T ss_pred -----------------C---cc-hHHHHHHHHHH----cCCCeEEEeceeEECCCCC------------CchHHHHHHH
Confidence 2 22 79999988753 5899999999999999754 1245567778
Q ss_pred HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
+..++++.+++++.+.++|+|++|+|+++..+++++. ..+++||++++ +.+|+.|+++.+.+.+|.+..+...+....
T Consensus 228 ~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~~~ 305 (378)
T PLN00016 228 LVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK-AAGQIFNIVSD-RAVTFDGMAKACAKAAGFPEEIVHYDPKAV 305 (378)
T ss_pred HHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc-ccCCEEEecCC-CccCHHHHHHHHHHHhCCCCceeecCcccc
Confidence 8889898888888899999999999999999999864 35689999997 799999999999999997653322221111
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHH
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 373 (390)
.......+ ........+|++|++++|||+|+++++|+|+++++||+.
T Consensus 306 ~~~~~~~~---p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~ 352 (378)
T PLN00016 306 GFGAKKAF---PFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFG 352 (378)
T ss_pred Cccccccc---cccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHh
Confidence 10000000 011234567999999999999999999999999999976
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=259.22 Aligned_cols=303 Identities=19% Similarity=0.231 Sum_probs=247.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC--e-EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--cc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH--K-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--AD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~--~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d 91 (390)
+|||||||++|.+|++|.+.+... |. + .+.... -.+|+++..+.++++.. +.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q-~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~ekPt 57 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQ-GFDDENWVFIGS----------------------KDADLTNLADTRALFESEKPT 57 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhc-CCCCcceEEecc----------------------ccccccchHHHHHHHhccCCc
Confidence 579999999999999999999998 44 2 222221 25899999999999986 99
Q ss_pred EEEEeccccCC-ccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 92 LTINLAAICTP-ADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 92 ~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
+|||+|+.++. -.....+...++.|+....|++..|.++| +++|++.|.++|.+....|++|..-.
T Consensus 58 hVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh------------ 125 (315)
T KOG1431|consen 58 HVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVH------------ 125 (315)
T ss_pred eeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhc------------
Confidence 99999999865 34456778899999999999999999999 99999999999999888888776533
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC-
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ- 248 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (390)
++|+....-.|+.+|.++.-.-+.|.+++|..++.+-|+++|||+.++.+.. ++..+.++..+-....+|.
T Consensus 126 -----~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~---sHVlPali~r~h~ak~~gtd 197 (315)
T KOG1431|consen 126 -----NGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPEN---SHVLPALIHRFHEAKRNGTD 197 (315)
T ss_pred -----cCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCccc---ccchHHHHHHHHHHHhcCCc
Confidence 2333334456999999999888999999999999999999999999876542 3446667766666666776
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCC--cccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHN--EVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~--~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
++.++|.|...|+|||++|+|+++++++.+-+ .-+-.+++.+ + .+|++|+++++.++++.......
T Consensus 198 ~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~--~vEpiils~g-e~~EVtI~e~aeaV~ea~~F~G~l~~--------- 265 (315)
T KOG1431|consen 198 ELTVWGSGSPLRQFIYSDDLADLFIWVLREYE--GVEPIILSVG-ESDEVTIREAAEAVVEAVDFTGKLVW--------- 265 (315)
T ss_pred eEEEecCCChHHHHhhHhHHHHHHHHHHHhhc--CccceEeccC-ccceeEHHHHHHHHHHHhCCCceEEe---------
Confidence 89999999999999999999999999999875 3456778875 4 89999999999999986654322
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccC-HHHHHHHHHHHHHHhHhHHH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTS-LWDLLESTLTYQHRTYAEAI 379 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~-~~~~l~~~~~~~~~~~~~~~ 379 (390)
.....+...+..+|++|++ .|+|.|+++ ++++|.++++||.++++-+.
T Consensus 266 ----DttK~DGq~kKtasnsKL~-sl~pd~~ft~l~~ai~~t~~Wy~~Ny~qar 314 (315)
T KOG1431|consen 266 ----DTTKSDGQFKKTASNSKLR-SLLPDFKFTPLEQAISETVQWYLDNYEQAR 314 (315)
T ss_pred ----eccCCCCCcccccchHHHH-HhCCCcccChHHHHHHHHHHHHHHhHHhhc
Confidence 1123355667789999995 589999986 99999999999999987654
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=274.21 Aligned_cols=314 Identities=17% Similarity=0.221 Sum_probs=227.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc---cccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH---LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+|+|+|||||||||++|++.|+++ ||+|++..|++...+. +.+... ..++...+.+|+.|.+.+..++.+||.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~--a~~~l~l~~aDL~d~~sf~~ai~gcdg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEG--AKERLKLFKADLLDEGSFDKAIDGCDG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhccc--CcccceEEeccccccchHHHHHhCCCE
Confidence 5689999999999999999999999 9999999999876333 332221 245699999999999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
|||+|..+...... ...+.++.++.||+|++++|++.. +|+||+||.+.-..... ...++...++ +..
T Consensus 82 VfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~-~~~~~~vvdE--------~~w 151 (327)
T KOG1502|consen 82 VFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGP-NIGENSVVDE--------ESW 151 (327)
T ss_pred EEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCc-CCCCCccccc--------ccC
Confidence 99999988643322 344789999999999999999998 99999999755443211 1111122111 011
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
+...++... .+.|..+|..+|+..++++.+.+++.+.+-|+.|+||... | ........+....+|..-
T Consensus 152 sd~~~~~~~--~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~-------~---~l~~s~~~~l~~i~G~~~ 219 (327)
T KOG1502|consen 152 SDLDFCRCK--KLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQ-------P---SLNSSLNALLKLIKGLAE 219 (327)
T ss_pred CcHHHHHhh--HHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcc-------c---ccchhHHHHHHHHhcccc
Confidence 222222111 1579999999999999999999999999999999999876 2 112223344455555322
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccc
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (390)
... .....|+||+|+|.+++.+++.+. ..+.|.|.+. ..++.|+++++.+.++... ++.....
T Consensus 220 ~~~---n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~--~~~~~ei~~~l~~~~P~~~----ip~~~~~------ 282 (327)
T KOG1502|consen 220 TYP---NFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGE--VVSIKEIADILRELFPDYP----IPKKNAE------ 282 (327)
T ss_pred cCC---CCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecC--cccHHHHHHHHHHhCCCCC----CCCCCCc------
Confidence 222 234459999999999999999986 4578999994 6779999999999888654 1111110
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
..........++++|+++..||. .++++|.+.++++++++.
T Consensus 283 --~~~~~~~~~~~~~~k~k~lg~~~-~~~l~e~~~dt~~sl~~~ 323 (327)
T KOG1502|consen 283 --EHEGFLTSFKVSSEKLKSLGGFK-FRPLEETLSDTVESLREK 323 (327)
T ss_pred --cccccccccccccHHHHhcccce-ecChHHHHHHHHHHHHHh
Confidence 00112223468999996544455 459999999999999875
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=267.49 Aligned_cols=277 Identities=19% Similarity=0.216 Sum_probs=236.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+|||||++|++|+.|++.|. . +++|+.++|.+ .|++|.+.+.+++++ ||+|||
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~-~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~PDvVIn 56 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G-EFEVIATDRAE----------------------LDITDPDAVLEVIRETRPDVVIN 56 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C-CceEEeccCcc----------------------ccccChHHHHHHHHhhCCCEEEE
Confidence 459999999999999999999 4 89999998853 899999999999996 899999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+|+++....+..+++..+.+|..++.+++++|++.|.++||+||.+||+...+.++.|+++.
T Consensus 57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~------------------ 118 (281)
T COG1091 57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTP------------------ 118 (281)
T ss_pred CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCC------------------
Confidence 99999999999999999999999999999999999999999999999999987777777765
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
.|.+.||.||+++|..++... -+.+|+|.+++||...+ +|+..+++....++++.+..
T Consensus 119 ----~P~nvYG~sKl~GE~~v~~~~----~~~~I~Rtswv~g~~g~-------------nFv~tml~la~~~~~l~vv~- 176 (281)
T COG1091 119 ----NPLNVYGRSKLAGEEAVRAAG----PRHLILRTSWVYGEYGN-------------NFVKTMLRLAKEGKELKVVD- 176 (281)
T ss_pred ----CChhhhhHHHHHHHHHHHHhC----CCEEEEEeeeeecCCCC-------------CHHHHHHHHhhcCCceEEEC-
Confidence 377899999999999997754 67999999999998654 58888999999999999883
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGY 335 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
++..+.+++.|+|+++..++.... .+++||+++. ...||.|+++.|.+.++........... ..++...
T Consensus 177 -Dq~gsPt~~~dlA~~i~~ll~~~~--~~~~yH~~~~-g~~Swydfa~~I~~~~~~~~~v~~~~~~-------~~~~~~a 245 (281)
T COG1091 177 -DQYGSPTYTEDLADAILELLEKEK--EGGVYHLVNS-GECSWYEFAKAIFEEAGVDGEVIEPIAS-------AEYPTPA 245 (281)
T ss_pred -CeeeCCccHHHHHHHHHHHHhccc--cCcEEEEeCC-CcccHHHHHHHHHHHhCCCccccccccc-------cccCccC
Confidence 578899999999999999999864 4569999996 5789999999999999866522211110 0122233
Q ss_pred CCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHH
Q 016370 336 DDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370 (390)
Q Consensus 336 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 370 (390)
..+....+|+.|+.+.+|+.|. +|+++++++++.
T Consensus 246 ~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 246 KRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred CCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 4566678999999999998776 899999988754
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=285.29 Aligned_cols=276 Identities=19% Similarity=0.234 Sum_probs=215.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+++|+||||||+||||++|++.|++++ +++|++++|+......+.... ...+++++.+|++|.+.+.++++++|+|
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~l~~~~~~iD~V 78 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---PAPCLRFFIGDVRDKERLTRALRGVDYV 78 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence 357899999999999999999999982 378999998765432221110 0146889999999999999999999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
||+||.........++...+++|+.++.+++++|++.+ ++||++||...+
T Consensus 79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~----------------------------- 129 (324)
T TIGR03589 79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA----------------------------- 129 (324)
T ss_pred EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-----------------------------
Confidence 99999865444456677899999999999999999988 899999995311
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC-
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ- 248 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (390)
.|.++|+.+|..+|.+++.+. ...|++++++||+++|||+.. +++.+...+..+.
T Consensus 130 -------~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~--------------~i~~~~~~~~~~~~ 188 (324)
T TIGR03589 130 -------NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS--------------VVPFFKSLKEEGVT 188 (324)
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC--------------cHHHHHHHHHhCCC
Confidence 144579999999999997743 456899999999999998643 5666777766675
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
++++. ++.+.++|+|++|+|++++.++++.. .+++|+ +++ ..+++.|+++.+.+.++... .+
T Consensus 189 ~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~--~~~~~~-~~~-~~~sv~el~~~i~~~~~~~~----~~--------- 250 (324)
T TIGR03589 189 ELPIT-DPRMTRFWITLEQGVNFVLKSLERML--GGEIFV-PKI-PSMKITDLAEAMAPECPHKI----VG--------- 250 (324)
T ss_pred CeeeC-CCCceEeeEEHHHHHHHHHHHHhhCC--CCCEEc-cCC-CcEEHHHHHHHHHhhCCeeE----eC---------
Confidence 56665 67788999999999999999998742 457885 554 57999999999998543211 00
Q ss_pred cccCCCCCC-CCCCcCcHHHHHHhcCcccccCHHHHHH
Q 016370 329 EFYGEGYDD-SDKRIPDMTIINQQLGWNPKTSLWDLLE 365 (390)
Q Consensus 329 ~~~~~~~~~-~~~~~~d~~k~~~~lg~~p~~~~~~~l~ 365 (390)
.+..+ .....+|.+|+++.|||+|+++++++++
T Consensus 251 ----~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 251 ----IRPGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred ----CCCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 01121 2335689999999999999999999986
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=290.64 Aligned_cols=301 Identities=13% Similarity=0.117 Sum_probs=214.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc----cCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES----QTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.+.+|+||||||+||||++|+++|+++ |++|+++.|+.+....+..... .....++.++.+|++|.+.+.+++.+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 467899999999999999999999999 9999998887544332211100 00013578999999999999999999
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeecc--cccccc--cC--CCCCCCCCCCCCc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTC--EVYGKT--IG--SFLPKDSPLRQDP 161 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~--~vy~~~--~~--~~~~e~~~~~~~~ 161 (390)
+|+|||+|+...+...........+.|+.++.+++++|++. + +||||+||. .+|+.. .. .+++|+.+...
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~-- 206 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE-- 206 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh--
Confidence 99999999987543221122345678999999999999986 6 999999996 578642 11 22333322110
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
.....|.+.|+.+|..+|.+++.+++.++++++++||+++|||+... ..... ++
T Consensus 207 --------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~---------~~~~~---~~ 260 (367)
T PLN02686 207 --------------SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFR---------RNSTA---TI 260 (367)
T ss_pred --------------hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCC---------CCChh---HH
Confidence 01223566899999999999999988889999999999999997531 00111 11
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCC
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~ 320 (390)
....+. +.+.+++ .++|+||+|+|++++.+++.. ....+++| ++++ +.+++.|+++.+.+.+|.+......+.
T Consensus 261 -~~~~g~-~~~~g~g--~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 334 (367)
T PLN02686 261 -AYLKGA-QEMLADG--LLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFD-HVVSREDEAEELARQIGLPINKIAGNS 334 (367)
T ss_pred -HHhcCC-CccCCCC--CcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeC-CCccHHHHHHHHHHHcCCCCCcCCCch
Confidence 233443 4555554 467999999999999999853 11245688 7775 799999999999999986543222111
Q ss_pred CcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHH
Q 016370 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361 (390)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~ 361 (390)
. ...+...+.+|++|+++.|||.|+-.++
T Consensus 335 ~------------~~~d~~~~~~d~~kl~~~l~~~~~~~~~ 363 (367)
T PLN02686 335 S------------SDDTPARFELSNKKLSRLMSRTRRCCYD 363 (367)
T ss_pred h------------hcCCcccccccHHHHHHHHHHhhhcccc
Confidence 0 0134567789999999999999875443
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=276.25 Aligned_cols=326 Identities=18% Similarity=0.184 Sum_probs=251.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
++.+|+||||+||+|+||+++|+++. ..+|++++..+.......+... .....++++.+|+.|...+.+++.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~-~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTG-FRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhc-ccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 56789999999999999999999983 3899999987742211111000 02468999999999999999999999 999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC-CCCCCCCCCCCCccccccccCCCC
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
|||+...+.....++...+++|+.||.+++++|.+.+ +++||+||+.|+..... .--+|+.|..
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p-------------- 146 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYP-------------- 146 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCc--------------
Confidence 9988876666666788999999999999999999999 99999999999877654 2233444432
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
..+...|+.||..+|.+++......++.+++|||+.||||++. .+++.+...+..++.+..
T Consensus 147 ------~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~-------------~~~~~i~~~~~~g~~~f~ 207 (361)
T KOG1430|consen 147 ------LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDK-------------RLLPKIVEALKNGGFLFK 207 (361)
T ss_pred ------cccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCc-------------cccHHHHHHHHccCceEE
Confidence 1244589999999999999987666799999999999999976 577888888899998888
Q ss_pred ecCCcceeeeeeHHHHHHHHHHHHh----CCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccC-CcccCCCcccCC-
Q 016370 253 VDGGQSQRTFIYIKDAIEAVLLMIE----NPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-EAALEEPTVDVS- 326 (390)
Q Consensus 253 ~~~~~~~~~~i~v~D~a~~~~~~l~----~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~-~~~~~~~~~~~~- 326 (390)
.++++...++++++.++.+++.+.. ......|+.|+|.++ +++...++...+.+.+|...+ ....|.......
T Consensus 208 ~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~-~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~ 286 (361)
T KOG1430|consen 208 IGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD-TPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLA 286 (361)
T ss_pred eeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC-CcchhhHHHHHHHHhcCCCCCceeecchHHHHHHH
Confidence 8888889999999999988887644 334468899999996 788888888899999997665 222222211100
Q ss_pred -------------cccccCCCCC-CCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 327 -------------SKEFYGEGYD-DSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 327 -------------~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
...+...... ......++..|++++|||.|.+++++++.+++.|+....+.
T Consensus 287 ~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~ 351 (361)
T KOG1430|consen 287 YLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDS 351 (361)
T ss_pred HHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhc
Confidence 0000000011 11245799999999999999999999999999988765443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=272.76 Aligned_cols=233 Identities=30% Similarity=0.494 Sum_probs=201.8
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEEec
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTINLA 97 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih~a 97 (390)
|||||||||||++|+++|+++ |+.|+.+.|+.......... .+++++.+|+.|.+.+.++++. +|+|||+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK-GHEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TTEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHc-CCcccccccccccccccccc------ceEEEEEeeccccccccccccccCceEEEEee
Confidence 799999999999999999999 99999998887654432221 2789999999999999999997 59999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+.........++...++.|+.++.+++++|++.+ +++||+||..+|+.....+++|+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~------------------ 135 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPIN------------------ 135 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCC------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------------------
Confidence 9764222335677889999999999999999999 799999999999999767777777652
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
|.+.|+.+|..+|++++.+.++++++++++||+.+|||. . +......++..++.++..++++.+++++
T Consensus 136 ----~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (236)
T PF01370_consen 136 ----PLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-N-------PNNNSSSFLPSLIRQALKGKPIKIPGDG 203 (236)
T ss_dssp ----HSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-S-------SSSSTSSHHHHHHHHHHTTSSEEEESTS
T ss_pred ----ccccccccccccccccccccccccccccccccccccccc-c-------cccccccccchhhHHhhcCCcccccCCC
Confidence 566899999999999999998889999999999999998 1 1233457889999999999999999999
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEec
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~ 290 (390)
++.++|+|++|+|++++.+++++. ..+++|||+
T Consensus 204 ~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~yNig 236 (236)
T PF01370_consen 204 SQVRDFIHVDDLAEAIVAALENPK-AAGGIYNIG 236 (236)
T ss_dssp SCEEEEEEHHHHHHHHHHHHHHSC-TTTEEEEES
T ss_pred CCccceEEHHHHHHHHHHHHhCCC-CCCCEEEeC
Confidence 999999999999999999999986 578999996
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=273.77 Aligned_cols=290 Identities=15% Similarity=0.192 Sum_probs=216.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|||||||||||++|+++|+++ ||+|++++|+.++...+. ..+++++.+|+.|++.+..+++++|+|||++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~-------~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~ 72 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLK-------EWGAELVYGDLSLPETLPPSFKGVTAIIDAS 72 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHh-------hcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence 68999999999999999999999 999999999865433222 1478999999999999999999999999987
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+.. ..++....++|+.++.+++++|++.+ +||||+||...+..
T Consensus 73 ~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~------------------------------- 116 (317)
T CHL00194 73 TSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY------------------------------- 116 (317)
T ss_pred CCC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc-------------------------------
Confidence 532 12344567789999999999999999 99999998532110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
+.+.|..+|..+|++++ ..+++++++||+.+|+.. +..+......+.++.+. ++
T Consensus 117 ----~~~~~~~~K~~~e~~l~----~~~l~~tilRp~~~~~~~-----------------~~~~~~~~~~~~~~~~~-~~ 170 (317)
T CHL00194 117 ----PYIPLMKLKSDIEQKLK----KSGIPYTIFRLAGFFQGL-----------------ISQYAIPILEKQPIWIT-NE 170 (317)
T ss_pred ----CCChHHHHHHHHHHHHH----HcCCCeEEEeecHHhhhh-----------------hhhhhhhhccCCceEec-CC
Confidence 11258899999999874 358999999999888642 11112223345566554 45
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc--cccc---
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS--KEFY--- 331 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~~--- 331 (390)
.+.++|||++|+|+++..+++.+. ..+++||++++ +.+|+.|+++.+.+.+|++......|.+...... ..++
T Consensus 171 ~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~ni~g~-~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~ 248 (317)
T CHL00194 171 STPISYIDTQDAAKFCLKSLSLPE-TKNKTFPLVGP-KSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWT 248 (317)
T ss_pred CCccCccCHHHHHHHHHHHhcCcc-ccCcEEEecCC-CccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccc
Confidence 667899999999999999998754 46789999997 7999999999999999986555544433221110 0000
Q ss_pred C---CC------CCCCCCCcCcHHHHHHhcCcccc--cCHHHHHHHHHHHHHHhHhHHH
Q 016370 332 G---EG------YDDSDKRIPDMTIINQQLGWNPK--TSLWDLLESTLTYQHRTYAEAI 379 (390)
Q Consensus 332 ~---~~------~~~~~~~~~d~~k~~~~lg~~p~--~~~~~~l~~~~~~~~~~~~~~~ 379 (390)
. .. .........+.+++.+.||+.|. .++++++++.+.-..++.++..
T Consensus 249 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (317)
T CHL00194 249 WNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILKRLKDIN 307 (317)
T ss_pred hhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 0 00 01122345678899999999984 5899999988887777666544
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=243.31 Aligned_cols=323 Identities=19% Similarity=0.161 Sum_probs=255.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
+|+.||||-||+-|++|++.|+++ ||+|+++.|+.+.... +... ......++.++.+|++|...+..+++. |
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLek-GY~VhGi~Rrss~~n~~ri~L~~~-~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEK-GYEVHGIKRRSSSFNTPRIHLYED-PHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhc-CcEEEEEeeccccCCcccceeccc-cccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 578999999999999999999999 9999999997543211 1111 111234588999999999999999986 9
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
|-|+|+|+.+....++++|....+++..||.+|+++.+..+ .||...||...||.....|.+|++|+.
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFy--------- 150 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFY--------- 150 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCC---------
Confidence 99999999999999999999999999999999999999876 689999999999999999999999985
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
|+|+|+.+|+.+--....|...+|+-.|.=+.++-=+|..+ -..+++-+..-+.++..|
T Consensus 151 -------------PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rg--------e~FVTRKIt~ava~Ik~G 209 (345)
T COG1089 151 -------------PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRG--------ETFVTRKITRAVARIKLG 209 (345)
T ss_pred -------------CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCc--------cceehHHHHHHHHHHHcc
Confidence 88899999999999999998889998887666665566443 234556666666677766
Q ss_pred CCe-EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc---
Q 016370 248 QPL-KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV--- 323 (390)
Q Consensus 248 ~~~-~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~--- 323 (390)
..- ...|+-+..|||=|..|-++++..+++++ .++.|+++++ +..|++|++++..+..|......-.-....
T Consensus 210 ~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~---~PddyViATg-~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~d 285 (345)
T COG1089 210 LQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE---EPDDYVIATG-ETHSVREFVELAFEMVGIDLEWEGTGVDEKGVD 285 (345)
T ss_pred ccceEEeccccccccccchHHHHHHHHHHHccC---CCCceEEecC-ceeeHHHHHHHHHHHcCceEEEeeccccccccc
Confidence 543 34588899999999999999999999986 4789999998 899999999999999985433210000000
Q ss_pred cCCc--ccccC---CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 324 DVSS--KEFYG---EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 324 ~~~~--~~~~~---~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
.... ..... .++........|.+|+++.|||+|+++++|.+++++++..+..
T Consensus 286 a~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~~ 342 (345)
T COG1089 286 AKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEAA 342 (345)
T ss_pred cccCceeEEECccccCchhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHHHh
Confidence 0000 00011 1123344557999999999999999999999999999887654
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=281.58 Aligned_cols=258 Identities=18% Similarity=0.249 Sum_probs=195.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+||||||+||||++++++|+++ |++|++++|...... ..+++++.+|+.|.+.+..+++++|+|||+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~-G~~Vv~l~R~~~~~~----------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA 69 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ-GHEVVGIARHRPDSW----------PSSADFIAADIRDATAVESAMTGADVVAHCA 69 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCchhhc----------ccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence 58999999999999999999999 999999998753211 1368899999999999999999999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+...+ .+++|+.++.+++++|++.+ ++|||+||.
T Consensus 70 a~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~------------------------------------ 104 (854)
T PRK05865 70 WVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSG------------------------------------ 104 (854)
T ss_pred Ccccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCc------------------------------------
Confidence 85421 46789999999999999998 899999982
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
. |..+|.++. .++++++++||+++|||+.. .++ ..+. ..++...|++
T Consensus 105 -------~----K~aaE~ll~----~~gl~~vILRp~~VYGP~~~-------------~~i----~~ll-~~~v~~~G~~ 151 (854)
T PRK05865 105 -------H----QPRVEQMLA----DCGLEWVAVRCALIFGRNVD-------------NWV----QRLF-ALPVLPAGYA 151 (854)
T ss_pred -------H----HHHHHHHHH----HcCCCEEEEEeceEeCCChH-------------HHH----HHHh-cCceeccCCC
Confidence 1 778888774 35899999999999999632 222 2222 2233333455
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD 336 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
...++|||++|+|+++..+++.+. ..+++||++++ +.+|+.|+++.+.+.... .+.+...... ... ....
T Consensus 152 ~~~~dfIhVdDVA~Ai~~aL~~~~-~~ggvyNIgsg-~~~Si~EIae~l~~~~~~------v~~~~~~~~~-~~~-~~~~ 221 (854)
T PRK05865 152 DRVVQVVHSDDAQRLLVRALLDTV-IDSGPVNLAAP-GELTFRRIAAALGRPMVP------IGSPVLRRVT-SFA-ELEL 221 (854)
T ss_pred CceEeeeeHHHHHHHHHHHHhCCC-cCCCeEEEECC-CcccHHHHHHHHhhhhcc------CCchhhhhcc-chh-hhhc
Confidence 667899999999999999997543 24679999997 799999999998864311 0000000000 000 0001
Q ss_pred CCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 337 DSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 337 ~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
......+|++|+++.|||+|+++++++|+++++||+.+
T Consensus 222 ~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 222 LHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred ccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 11234689999999999999999999999999999864
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=271.61 Aligned_cols=290 Identities=21% Similarity=0.236 Sum_probs=202.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhh-CC-CeEEEEecCChhhhccccc----c----------------ccCCCCCeeE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLE-TP-HKILALDVYNDKIKHLLEP----E----------------SQTGADRIQF 72 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~-~g-~~V~~~~r~~~~~~~~~~~----~----------------~~~~~~~i~~ 72 (390)
+++|+|||||||||||++|++.|++. +. .+|+++.|..+......+. . ......++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 57899999999999999999999985 22 4689999865422111000 0 0001258999
Q ss_pred EeCCCC-------ChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccccc
Q 016370 73 HRLNIK-------HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVY 143 (390)
Q Consensus 73 ~~~D~~-------d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy 143 (390)
+.||++ +.+.+..+++++|+|||+|+... ...++...+.+|+.||.+++++|++. + ++|||+||++||
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy 165 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC 165 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence 999998 44557788889999999999875 33567788999999999999999986 4 899999999999
Q ss_pred ccccCCCCCCC-CCCCCCccc---cccccC---------------CCCcc---------cCC--CCCCCchhHHHHHHHH
Q 016370 144 GKTIGSFLPKD-SPLRQDPAY---YVLKED---------------ASPCI---------FGS--IEKQRWSYACAKQLIE 193 (390)
Q Consensus 144 ~~~~~~~~~e~-~~~~~~~~~---~~~~e~---------------~~~~~---------~~~--~~~p~~~Y~~sK~~~E 193 (390)
|...+. ++|. .+....+.. ...+|+ .+... ..+ ...+.+.|+.+|.++|
T Consensus 166 G~~~~~-i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE 244 (491)
T PLN02996 166 GEKSGL-ILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE 244 (491)
T ss_pred cCCCce-eeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence 875432 2221 111100000 000000 00000 000 1224567999999999
Q ss_pred HHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHH
Q 016370 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVL 273 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 273 (390)
.++..+. .+++++++||++||||+....++|. .+. .....++..+..|....+.|++++.+|++||+|+|++++
T Consensus 245 ~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi---~~~-~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l 318 (491)
T PLN02996 245 MLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWI---EGL-RTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMI 318 (491)
T ss_pred HHHHHhc--CCCCEEEECCCEeccCCcCCCCCcc---cch-hhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHH
Confidence 9998875 3899999999999999876322111 111 123445555566777678899999999999999999999
Q ss_pred HHHhCC--CCCCCceEEecCC-CCcccHHHHHHHHHHHhhcccC
Q 016370 274 LMIENP--ARANGHIFNVGNP-HNEVTVRQLAEMMTEVYAKVSG 314 (390)
Q Consensus 274 ~~l~~~--~~~~~~~~nv~~~-~~~~s~~~l~~~i~~~~g~~~~ 314 (390)
.++... ....+++||++++ .+++|+.++++.+.+.++..+.
T Consensus 319 ~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 319 VAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred HHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 998763 1123579999985 2589999999999998886553
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=249.21 Aligned_cols=272 Identities=14% Similarity=0.129 Sum_probs=192.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih 95 (390)
||||||||+||||++|++.|+++ |++|+... +|+.+.+.+...++ ++|+|||
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~-g~~V~~~~-------------------------~~~~~~~~v~~~l~~~~~D~ViH 63 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQ-GIDFHYGS-------------------------GRLENRASLEADIDAVKPTHVFN 63 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCEEEEec-------------------------CccCCHHHHHHHHHhcCCCEEEE
Confidence 68999999999999999999999 89886432 33445556666666 5999999
Q ss_pred eccccCCc---cccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCC------CCCCCCCCCCCcccccc
Q 016370 96 LAAICTPA---DYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGS------FLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 96 ~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~------~~~e~~~~~~~~~~~~~ 166 (390)
+||..+.. .+..++...+++|+.++.+|+++|++.+.+++++||.++|+..... +++|+++.
T Consensus 64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p--------- 134 (298)
T PLN02778 64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTP--------- 134 (298)
T ss_pred CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCC---------
Confidence 99987532 2456888999999999999999999999567788888888754211 12322221
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
..|.+.|+.+|+++|.++..++ +..++|+..++|++.. ....++..+..
T Consensus 135 ------------~~~~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~--------------~~~~fi~~~~~ 183 (298)
T PLN02778 135 ------------NFTGSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLS--------------NPRNFITKITR 183 (298)
T ss_pred ------------CCCCCchHHHHHHHHHHHHHhh-----ccEEeeecccCCcccc--------------cHHHHHHHHHc
Confidence 1245789999999999998765 4668888877876432 12335677777
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+.++...+ .+|+|++|++++++.+++.. .+++||++++ +.+|+.|+++++++.++.......+.....
T Consensus 184 ~~~~~~~~-----~s~~yv~D~v~al~~~l~~~---~~g~yNigs~-~~iS~~el~~~i~~~~~~~~~~~~~~i~~~--- 251 (298)
T PLN02778 184 YEKVVNIP-----NSMTILDELLPISIEMAKRN---LTGIYNFTNP-GVVSHNEILEMYRDYIDPSFTWKNFTLEEQ--- 251 (298)
T ss_pred CCCeeEcC-----CCCEEHHHHHHHHHHHHhCC---CCCeEEeCCC-CcccHHHHHHHHHHHhCCCceeccccHHHH---
Confidence 77765543 27999999999999999764 2469999997 799999999999999995321111110000
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 372 (390)
. ...+.......+|++|+++.++=.+. ..+++++..++-++
T Consensus 252 ~----~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~~~ 292 (298)
T PLN02778 252 A----KVIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFEPNK 292 (298)
T ss_pred H----HHHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHHHHH
Confidence 0 00111122336999999988764333 45666666655543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=281.70 Aligned_cols=326 Identities=17% Similarity=0.140 Sum_probs=222.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHh-hCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh------hHHHHhhccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILL-ETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD------SRLEGLIKMA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~------~~~~~~~~~~ 90 (390)
|+|||||||||||++|+++|++ ..|++|++++|...... +..........+++++.+|++|+ +.+..+ .++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCC
Confidence 5899999999999999999994 23899999999653321 11100000115789999999984 456665 789
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|||||+..+. ........+.|+.++.+++++|++.+ ++|||+||..+||...+. .+|+....
T Consensus 79 D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~-~~e~~~~~----------- 143 (657)
T PRK07201 79 DHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGV-FREDDFDE----------- 143 (657)
T ss_pred CEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCc-cccccchh-----------
Confidence 999999997643 23455678899999999999999998 999999999999875432 22222110
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc-CC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-RQ 248 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (390)
...+.+.|+.+|+.+|.++++ ..+++++++||+.+|||....... ... ...++..++..+.. ..
T Consensus 144 --------~~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~---~~~-~~~~~~~~~~~~~~~~~ 208 (657)
T PRK07201 144 --------GQGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMD---KID-GPYYFFKVLAKLAKLPS 208 (657)
T ss_pred --------hcCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccc---cCC-cHHHHHHHHHHhccCCc
Confidence 012345799999999999875 248999999999999986531000 000 01122233333321 12
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhccc---CCcccCCCcccC
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS---GEAALEEPTVDV 325 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~---~~~~~~~~~~~~ 325 (390)
.+++.+.+...++++|++|+++++..++..+. ..+++||++++ +.+|+.|+++.+.+.+|.+. .....+......
T Consensus 209 ~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~-~~g~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~ 286 (657)
T PRK07201 209 WLPMVGPDGGRTNIVPVDYVADALDHLMHKDG-RDGQTFHLTDP-KPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAP 286 (657)
T ss_pred ccccccCCCCeeeeeeHHHHHHHHHHHhcCcC-CCCCEEEeCCC-CCCcHHHHHHHHHHHhCCCccccccccCChHHHHH
Confidence 23444556678899999999999999988643 45789999997 79999999999999999765 333333221110
Q ss_pred Ccc------cc-------cCCC---C-CCCCCCcCcHHHHHHhc---CcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 326 SSK------EF-------YGEG---Y-DDSDKRIPDMTIINQQL---GWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 326 ~~~------~~-------~~~~---~-~~~~~~~~d~~k~~~~l---g~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
... .+ .+.. . .......+|++++++.| |+.. ..+.+.+...++|+.++.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 358 (657)
T PRK07201 287 LLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEV-PRLASYAPRLWDYWERHLDPD 358 (657)
T ss_pred HhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCC-CChHHHHHHHHHHHHhcCChh
Confidence 000 00 0000 0 01234578999999998 4432 368899999999999987664
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=255.29 Aligned_cols=286 Identities=16% Similarity=0.107 Sum_probs=196.3
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEeccc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAI 99 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~~ 99 (390)
||||||+||||+++++.|+++ |++|++++|++........ ..+ .|+.. ..+...+.++|+|||+|+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~-------~~~----~~~~~-~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKW-------EGY----KPWAP-LAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCcccc-------eee----ecccc-cchhhhcCCCCEEEECCCC
Confidence 699999999999999999998 9999999998765432111 111 12222 3455667889999999997
Q ss_pred cCCc--cccCChhHHHHHhhhhHHHHHHHHHhCC-C--cEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 100 CTPA--DYNTRPLDTIYSNFIDALPVVKYCSENN-K--RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 100 ~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~--~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
.... .....+...++.|+.++.+++++|++.+ + +||++||..+||.....+++|+.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~---------------- 131 (292)
T TIGR01777 68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPA---------------- 131 (292)
T ss_pred CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCC----------------
Confidence 5421 1122345677889999999999999987 3 56667777889976555666665332
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
+.+.|+..+...|..+... ++.+++++++||+.+|||..+ .+..+......... ...+
T Consensus 132 ------~~~~~~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~--------------~~~~~~~~~~~~~~-~~~g 189 (292)
T TIGR01777 132 ------GDDFLAELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG--------------ALAKMLPPFRLGLG-GPLG 189 (292)
T ss_pred ------CCChHHHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcc--------------hhHHHHHHHhcCcc-cccC
Confidence 2334666666677766543 446899999999999999643 22222222211111 1246
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
+++..++|||++|+|+++..+++++. ..++||++++ +.+|+.|+++.+++.+|.+.. ...|.+.... .+....
T Consensus 190 ~~~~~~~~i~v~Dva~~i~~~l~~~~--~~g~~~~~~~-~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~---~~~~~~ 262 (292)
T TIGR01777 190 SGRQWFSWIHIEDLVQLILFALENAS--ISGPVNATAP-EPVRNKEFAKALARALHRPAF-FPVPAFVLRA---LLGEMA 262 (292)
T ss_pred CCCcccccEeHHHHHHHHHHHhcCcc--cCCceEecCC-CccCHHHHHHHHHHHhCCCCc-CcCCHHHHHH---Hhchhh
Confidence 78889999999999999999998754 4579999996 799999999999999986432 2222221110 000000
Q ss_pred CCCCCCCcCcHHHHHHhcCccccc-CHHHHH
Q 016370 335 YDDSDKRIPDMTIINQQLGWNPKT-SLWDLL 364 (390)
Q Consensus 335 ~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l 364 (390)
.........+++|++ ++||+|++ +++|++
T Consensus 263 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 263 DLLLKGQRVLPEKLL-EAGFQFQYPDLDEAL 292 (292)
T ss_pred HHHhCCcccccHHHH-hcCCeeeCcChhhcC
Confidence 011235567889996 59999999 588864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=246.42 Aligned_cols=240 Identities=23% Similarity=0.344 Sum_probs=189.2
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCee----EEeCCCCChhHHHHhhc--cccE
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQ----FHRLNIKHDSRLEGLIK--MADL 92 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~----~~~~D~~d~~~~~~~~~--~~d~ 92 (390)
||||||+|.||+.|+++|++..-..++++++++.....+....... ...+++ .+.+|++|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999983478999999987766554433110 112343 46899999999999999 6999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
|||+|+..+.+.+..+|.+.+..|+.||.|++++|.+++ ++||++||....
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv---------------------------- 132 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV---------------------------- 132 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS----------------------------
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC----------------------------
Confidence 999999999999999999999999999999999999999 999999996432
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
+|.|.||.+|+.+|.++..+.... +.+++++|+|+|.|.... +++.|..++.+|+
T Consensus 133 --------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS--------------Vip~F~~Qi~~g~ 190 (293)
T PF02719_consen 133 --------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS--------------VIPLFKKQIKNGG 190 (293)
T ss_dssp --------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS--------------CHHHHHHHHHTTS
T ss_pred --------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc--------------HHHHHHHHHHcCC
Confidence 367799999999999999987665 689999999999997654 8999999999999
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhccc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~ 313 (390)
|+.+. +++-+|-|+.++++++.++.++.... .|++|.+-.| +++++.|+++.+.+..|..+
T Consensus 191 PlTvT-~p~mtRffmti~EAv~Lvl~a~~~~~--~geifvl~mg-~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 191 PLTVT-DPDMTRFFMTIEEAVQLVLQAAALAK--GGEIFVLDMG-EPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp SEEEC-ETT-EEEEE-HHHHHHHHHHHHHH----TTEEEEE----TCEECCCHHHHHHHHTT-EE
T ss_pred cceeC-CCCcEEEEecHHHHHHHHHHHHhhCC--CCcEEEecCC-CCcCHHHHHHHHHhhccccc
Confidence 99998 45778999999999999999998764 6889999987 79999999999999998643
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=253.43 Aligned_cols=266 Identities=23% Similarity=0.296 Sum_probs=222.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhcc--cc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIKM--AD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~~--~d 91 (390)
+++|+||||||+|-||+.+++++++..--++++++|++.+........... ...++.++.||++|.+.+..++++ +|
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 578999999999999999999999984577999999986554433222221 125789999999999999999998 99
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
+|||+|+..+.+.++.+|.+.+..|+.||+|++++|.+++ ++||++||...-
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV--------------------------- 380 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV--------------------------- 380 (588)
T ss_pred eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc---------------------------
Confidence 9999999999999999999999999999999999999999 999999995421
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
+|.|.||.+|..+|.++..+.++. +..++++|+|+|.|.... .++-|..++.+|
T Consensus 381 ---------~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS--------------ViPlFk~QI~~G 437 (588)
T COG1086 381 ---------NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS--------------VIPLFKKQIAEG 437 (588)
T ss_pred ---------CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC--------------CHHHHHHHHHcC
Confidence 377899999999999999987643 389999999999998764 899999999999
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS 327 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~ 327 (390)
+|+++. +++-.|-|+.+.|.++.++.+.+... .|++|-+-.| +++++.|+++.+.+..|..+.......-....++
T Consensus 438 gplTvT-dp~mtRyfMTI~EAv~LVlqA~a~~~--gGeifvldMG-epvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpG 513 (588)
T COG1086 438 GPLTVT-DPDMTRFFMTIPEAVQLVLQAGAIAK--GGEIFVLDMG-EPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPG 513 (588)
T ss_pred CCcccc-CCCceeEEEEHHHHHHHHHHHHhhcC--CCcEEEEcCC-CCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCc
Confidence 999998 56788999999999999999999864 7899999997 8999999999999999844333222222333444
Q ss_pred ccccCCC
Q 016370 328 KEFYGEG 334 (390)
Q Consensus 328 ~~~~~~~ 334 (390)
++.+++.
T Consensus 514 EKl~EeL 520 (588)
T COG1086 514 EKLYEEL 520 (588)
T ss_pred hhhhhhh
Confidence 4454443
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=244.29 Aligned_cols=281 Identities=12% Similarity=0.108 Sum_probs=195.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc---cccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH---LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+++|||||||||||++++++|+++ ||+|+++.|+.+.... +..... ...+++++.+|++|.+.+.+++.++|+|
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~-G~~V~~~~R~~~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~~~~~l~~~d~v 82 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR-GYTVHAAVQKNGETEIEKEIRGLSC--EEERLKVFDVDPLDYHSILDALKGCSGL 82 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEcCchhhhHHHHHHhccc--CCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence 468999999999999999999999 9999999986432111 111100 1246889999999999999999999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeecccccccc-----cCCCCCCCCCCCCCcccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKT-----IGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~~-----~~~~~~e~~~~~~~~~~~~~ 166 (390)
+|+++.... ...+....+++|+.++.+++++|.+. + +|+|++||...+... ...+++|+.+..+.
T Consensus 83 ~~~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~------ 154 (297)
T PLN02583 83 FCCFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQN------ 154 (297)
T ss_pred EEeCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHH------
Confidence 998764421 12235678999999999999999886 4 899999998765321 11233333221100
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
+ ...+...|+.+|..+|+.++.+++..+++++++||+.+|||+... ... ...
T Consensus 155 --------~--~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~-------------~~~-----~~~ 206 (297)
T PLN02583 155 --------F--CRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQ-------------HNP-----YLK 206 (297)
T ss_pred --------H--HhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCC-------------chh-----hhc
Confidence 0 001223699999999999999887789999999999999997541 000 112
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+.. ...+ ...++||||+|+|++++++++.+. .++.|+++++ ......++++++.+.++..+...... ..
T Consensus 207 ~~~-~~~~--~~~~~~v~V~Dva~a~~~al~~~~--~~~r~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~----~~- 275 (297)
T PLN02583 207 GAA-QMYE--NGVLVTVDVNFLVDAHIRAFEDVS--SYGRYLCFNH-IVNTEEDAVKLAQMLSPLIPSPPPYE----MQ- 275 (297)
T ss_pred CCc-ccCc--ccCcceEEHHHHHHHHHHHhcCcc--cCCcEEEecC-CCccHHHHHHHHHHhCCCCCCCCccc----cc-
Confidence 221 2222 235689999999999999999764 3458999985 45557889999999888542211100 00
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCccc
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNP 356 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 356 (390)
........++++|+ ++||++.
T Consensus 276 --------~~~~~~~~~~~~k~-~~l~~~~ 296 (297)
T PLN02583 276 --------GSEVYQQRIRNKKL-NKLMEDF 296 (297)
T ss_pred --------CCCccccccChHHH-HHhCccc
Confidence 01123456899999 5689863
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-31 Score=250.14 Aligned_cols=244 Identities=16% Similarity=0.171 Sum_probs=191.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccc-ccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE-SQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
....+|+|||||||||||+++++.|+++ |++|++++|+.+......... ......+++++.+|++|.+.+..+++
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence 3456789999999999999999999999 999999999875432110000 00012478999999999999999998
Q ss_pred -cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 89 -MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
++|+||||++.... .....+++|+.++.+++++|++.+ ++||++||.++|++
T Consensus 135 ~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p--------------------- 188 (390)
T PLN02657 135 DPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP--------------------- 188 (390)
T ss_pred CCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc---------------------
Confidence 59999999874321 122456789999999999999999 89999999877532
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
...|..+|...|..+.. ...+++++|+||+.+||+.. .++..+..
T Consensus 189 ---------------~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~------------------~~~~~~~~ 233 (390)
T PLN02657 189 ---------------LLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG------------------GQVEIVKD 233 (390)
T ss_pred ---------------chHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH------------------HHHHhhcc
Confidence 22588999999998865 34689999999999997521 13455677
Q ss_pred CCCeEEecCCccee-eeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 247 RQPLKLVDGGQSQR-TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 247 ~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
++++.+.|+++..+ ++||++|+|+++..++.++. ..+++||++++++.+|+.|+++++.+.+|++......+
T Consensus 234 g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~-~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp 306 (390)
T PLN02657 234 GGPYVMFGDGKLCACKPISEADLASFIADCVLDES-KINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVP 306 (390)
T ss_pred CCceEEecCCcccccCceeHHHHHHHHHHHHhCcc-ccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcC
Confidence 88888888887654 68999999999999998654 35789999985458999999999999999865554444
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=218.29 Aligned_cols=285 Identities=19% Similarity=0.180 Sum_probs=203.9
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccEEEEecc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLTINLAA 98 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~Vih~a~ 98 (390)
|+|||||||||++|+..|.+. ||+|++++|+++....... ..++ .-+.+.+... ++|+|||+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~-------~~v~-------~~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLH-------PNVT-------LWEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcC-------cccc-------ccchhhhcccCCCCEEEECCC
Confidence 689999999999999999998 9999999999876554322 1111 2234445545 6999999999
Q ss_pred ccCCcc-cc-CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 99 ICTPAD-YN-TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 99 ~~~~~~-~~-~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
..-... |. +..+...+..+..|..|+++..+.. +.+|..|.+..||+..+..++|+.|...
T Consensus 66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~-------------- 131 (297)
T COG1090 66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD-------------- 131 (297)
T ss_pred CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC--------------
Confidence 885433 33 4455677789999999999887554 6788888899999998888888876532
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH--hcCCCeE
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL--LRRQPLK 251 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 251 (390)
..-+.....-|+..... +..|.+++++|.|+|.||..+ ++..+..-. --|+++
T Consensus 132 ---------~Fla~lc~~WE~~a~~a-~~~gtRvvllRtGvVLs~~GG--------------aL~~m~~~fk~glGG~~- 186 (297)
T COG1090 132 ---------DFLAQLCQDWEEEALQA-QQLGTRVVLLRTGVVLSPDGG--------------ALGKMLPLFKLGLGGKL- 186 (297)
T ss_pred ---------ChHHHHHHHHHHHHhhh-hhcCceEEEEEEEEEecCCCc--------------chhhhcchhhhccCCcc-
Confidence 24555555666666554 345899999999999998765 333333222 224443
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
|+|++.++|||++|+++++..++++.. ..+.||+++| .+++..+|++.+.+.++++... .+|.... +...
T Consensus 187 --GsGrQ~~SWIhieD~v~~I~fll~~~~--lsGp~N~taP-~PV~~~~F~~al~r~l~RP~~~-~vP~~~~----rl~L 256 (297)
T COG1090 187 --GSGRQWFSWIHIEDLVNAILFLLENEQ--LSGPFNLTAP-NPVRNKEFAHALGRALHRPAIL-PVPSFAL----RLLL 256 (297)
T ss_pred --CCCCceeeeeeHHHHHHHHHHHHhCcC--CCCcccccCC-CcCcHHHHHHHHHHHhCCCccc-cCcHHHH----HHHh
Confidence 899999999999999999999999975 5679999999 7999999999999999975432 2221111 1112
Q ss_pred CCCC-CCCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHH
Q 016370 332 GEGY-DDSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLT 369 (390)
Q Consensus 332 ~~~~-~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~ 369 (390)
++.. ........=..|+ ...||+.++ +++++|.+.+.
T Consensus 257 Ge~a~~lL~gQrvlP~kl-~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 257 GEMADLLLGGQRVLPKKL-EAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred hhhHHHHhccchhhHHHH-HHCCCeeecCCHHHHHHHHHh
Confidence 2110 0111112334566 456999887 89999988653
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=233.66 Aligned_cols=262 Identities=21% Similarity=0.226 Sum_probs=186.5
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhh---ccccc------cccCCC-CCeeEEeCCCCCh------
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIK---HLLEP------ESQTGA-DRIQFHRLNIKHD------ 80 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~---~~~~~------~~~~~~-~~i~~~~~D~~d~------ 80 (390)
+|||||||||||++|++.|+++ | ++|+++.|..+... .+... ...... .+++++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~-g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRR-STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhC-CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 5899999999999999999998 7 67999999765321 11000 000001 4799999999753
Q ss_pred hHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 81 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+.+..+..++|+|||+|+.... ..........|+.++.+++++|.+.+ ++|||+||.++|+.....+..++.+...
T Consensus 80 ~~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~ 156 (367)
T TIGR01746 80 AEWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVT 156 (367)
T ss_pred HHHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccc
Confidence 4677777889999999997642 23345567799999999999999988 7899999999998754332223222110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
+...+.+.|+.+|+.+|.+++.+.+. |++++++||+.+||+..... .....++..
T Consensus 157 -----------------~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~-------~~~~~~~~~ 211 (367)
T TIGR01746 157 -----------------PPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGA-------INSSDILWR 211 (367)
T ss_pred -----------------cccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCC-------CCchhHHHH
Confidence 01123457999999999999887544 89999999999999843210 011234444
Q ss_pred HHHHHhcCCCeEEecCCc-ceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcccC
Q 016370 240 FSNNLLRRQPLKLVDGGQ-SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~ 314 (390)
++......+.+ +... ..++++|++|+|+++..++..+.. ..+++||++++ +.+++.|+++.+.+ +|.+..
T Consensus 212 ~~~~~~~~~~~---p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~-~~~s~~e~~~~i~~-~g~~~~ 283 (367)
T TIGR01746 212 MVKGCLALGAY---PDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNP-EPVSLDEFLEWLER-AGYNLK 283 (367)
T ss_pred HHHHHHHhCCC---CCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCC-CCCCHHHHHHHHHH-cCCCCC
Confidence 44444333322 2222 367899999999999999887642 12789999997 79999999999998 776543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-28 Score=236.55 Aligned_cols=292 Identities=18% Similarity=0.170 Sum_probs=194.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhh-CC-CeEEEEecCChhh---hccc-ccc------------c----cCCCCCeeE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLE-TP-HKILALDVYNDKI---KHLL-EPE------------S----QTGADRIQF 72 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~-~g-~~V~~~~r~~~~~---~~~~-~~~------------~----~~~~~~i~~ 72 (390)
+++|+|||||||||||++|+++|++. +. .+|+++.|..+.. +.+. ... . .....++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 57899999999999999999999986 22 3689999965322 1111 000 0 001357999
Q ss_pred EeCCCCCh------hHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccc
Q 016370 73 HRLNIKHD------SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYG 144 (390)
Q Consensus 73 ~~~D~~d~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~ 144 (390)
+.+|++++ +..+.+.+++|+|||+|+... ...++...+++|+.++.+++++|++.+ ++|||+||++|||
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG 273 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG 273 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence 99999986 456677778999999999875 345677889999999999999998875 7899999999999
Q ss_pred cccCCCCCCCCCCCC-------------------Ccccc--cc-ccCCCC----------cc--cC--CCCCCCchhHHH
Q 016370 145 KTIGSFLPKDSPLRQ-------------------DPAYY--VL-KEDASP----------CI--FG--SIEKQRWSYACA 188 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~-------------------~~~~~--~~-~e~~~~----------~~--~~--~~~~p~~~Y~~s 188 (390)
...+...++..+... ++..- .. ++-+.+ .. +. -.....+.|..+
T Consensus 274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~T 353 (605)
T PLN02503 274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFT 353 (605)
T ss_pred CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHH
Confidence 875433222222110 00000 00 000000 00 00 011234689999
Q ss_pred HHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHH
Q 016370 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDA 268 (390)
Q Consensus 189 K~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 268 (390)
|.++|.++++.. .++|++|+||+.|.+-...+.++|.. +...+.+.+ .....|.--.+.++++...|+|+||.+
T Consensus 354 K~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d---~~~~~~p~~-~~~g~G~lr~~~~~~~~~~DiVPVD~v 427 (605)
T PLN02503 354 KAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWME---GNRMMDPIV-LYYGKGQLTGFLADPNGVLDVVPADMV 427 (605)
T ss_pred HHHHHHHHHHhc--CCCCEEEEcCCEecccccCCcccccc---Cccccchhh-hheeccceeEEEeCCCeeEeEEeecHH
Confidence 999999998754 48999999999996644433333221 101111111 111234323366888999999999999
Q ss_pred HHHHHHHHhCCC---CCCCceEEecCC-CCcccHHHHHHHHHHHhhcccCC
Q 016370 269 IEAVLLMIENPA---RANGHIFNVGNP-HNEVTVRQLAEMMTEVYAKVSGE 315 (390)
Q Consensus 269 a~~~~~~l~~~~---~~~~~~~nv~~~-~~~~s~~~l~~~i~~~~g~~~~~ 315 (390)
+++++.++.... ...+++||++++ .+++++.++.+.+.+.+.+.+..
T Consensus 428 vna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~ 478 (605)
T PLN02503 428 VNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYM 478 (605)
T ss_pred HHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcc
Confidence 999999954311 124689999975 36999999999999877754433
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=236.79 Aligned_cols=237 Identities=17% Similarity=0.265 Sum_probs=174.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
||||||||+||||++|+++|+++ |++|++++|.+.... ..+++++.+|+.+.. +.+++.++|+|||+|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~-G~~Vi~ldr~~~~~~----------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA 68 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA-GHTVSGIAQHPHDAL----------DPRVDYVCASLRNPV-LQELAGEADAVIHLA 68 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCChhhcc----------cCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence 58999999999999999999999 999999998754311 246889999999985 788888999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~ 177 (390)
+.... .....|+.++.+++++|++.+.++||+||. ||...
T Consensus 69 a~~~~--------~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~~~------------------------------ 108 (699)
T PRK12320 69 PVDTS--------APGGVGITGLAHVANAAARAGARLLFVSQA--AGRPE------------------------------ 108 (699)
T ss_pred ccCcc--------chhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCCCc------------------------------
Confidence 86321 122589999999999999999789999985 33210
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCc
Q 016370 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257 (390)
Q Consensus 178 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (390)
.|. .+|.++.. ++++++++|++++|||+..+ ....++..++.....++++.
T Consensus 109 ------~~~----~aE~ll~~----~~~p~~ILR~~nVYGp~~~~---------~~~r~I~~~l~~~~~~~pI~------ 159 (699)
T PRK12320 109 ------LYR----QAETLVST----GWAPSLVIRIAPPVGRQLDW---------MVCRTVATLLRSKVSARPIR------ 159 (699)
T ss_pred ------ccc----HHHHHHHh----cCCCEEEEeCceecCCCCcc---------cHhHHHHHHHHHHHcCCceE------
Confidence 132 35666543 46899999999999996541 12345666665555555443
Q ss_pred ceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCCC
Q 016370 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDD 337 (390)
Q Consensus 258 ~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (390)
+||++|++++++.+++.. .+++||++++ +.+|+.|+++++......... . ...+
T Consensus 160 ----vIyVdDvv~alv~al~~~---~~GiyNIG~~-~~~Si~el~~~i~~~~p~~~~-~-----------------~~~~ 213 (699)
T PRK12320 160 ----VLHLDDLVRFLVLALNTD---RNGVVDLATP-DTTNVVTAWRLLRSVDPHLRT-R-----------------RVRS 213 (699)
T ss_pred ----EEEHHHHHHHHHHHHhCC---CCCEEEEeCC-CeeEHHHHHHHHHHhCCCccc-c-----------------cccc
Confidence 489999999999999864 2459999998 799999999988765221110 0 0012
Q ss_pred CCCCcCcHHHHHHhcCcccccCHH
Q 016370 338 SDKRIPDMTIINQQLGWNPKTSLW 361 (390)
Q Consensus 338 ~~~~~~d~~k~~~~lg~~p~~~~~ 361 (390)
.....-|...++..++|.|++.|+
T Consensus 214 ~~~~~pdi~~a~~~~~w~~~~~~~ 237 (699)
T PRK12320 214 WEQLIPEVDIAAVQEDWNFEFGWQ 237 (699)
T ss_pred HHHhCCCCchhhhhcCCCCcchHH
Confidence 223456667777788999998764
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=240.05 Aligned_cols=269 Identities=14% Similarity=0.154 Sum_probs=189.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
..||||||||+||||++|++.|.++ |++|.. ..+|++|.+.+..++. ++|+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~-g~~v~~-------------------------~~~~l~d~~~v~~~i~~~~pd~V 432 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQ-GIAYEY-------------------------GKGRLEDRSSLLADIRNVKPTHV 432 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhC-CCeEEe-------------------------eccccccHHHHHHHHHhhCCCEE
Confidence 4579999999999999999999998 887731 1246778888888877 59999
Q ss_pred EEeccccCC---ccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccccc------CCCCCCCCCCCCCcccc
Q 016370 94 INLAAICTP---ADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTI------GSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 94 ih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~------~~~~~e~~~~~~~~~~~ 164 (390)
||||+..+. ..+..++...+++|+.++.+|+++|++.+.++|++||.+||+... +.++.|+++..
T Consensus 433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~------ 506 (668)
T PLN02260 433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPN------ 506 (668)
T ss_pred EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCCCCC------
Confidence 999998753 244568889999999999999999999996688899999987531 12344433221
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
.+.+.|+.+|+++|.+++.+. +..++|+..+||.+.. ...+++ ..+
T Consensus 507 ---------------~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~----------~~~nfv----~~~ 552 (668)
T PLN02260 507 ---------------FTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLS----------NPRNFI----TKI 552 (668)
T ss_pred ---------------CCCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCC----------CccHHH----HHH
Confidence 144789999999999997763 4678888888875421 011333 333
Q ss_pred hcCCC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 245 LRRQP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 245 ~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
.+... +.+. .+..+++|++.++..+++.. .+++||++++ ..+|+.|++++|.+.++......++....
T Consensus 553 ~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~---~~giyni~~~-~~~s~~e~a~~i~~~~~~~~~~~~~~~~~- 621 (668)
T PLN02260 553 SRYNKVVNIP------NSMTVLDELLPISIEMAKRN---LRGIWNFTNP-GVVSHNEILEMYKDYIDPGFKWSNFTLEE- 621 (668)
T ss_pred hccceeeccC------CCceehhhHHHHHHHHHHhC---CCceEEecCC-CcCcHHHHHHHHHHhcCCcccccccCHHH-
Confidence 33332 2221 24677899999988888753 3589999997 69999999999999874111111111111
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHH
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 369 (390)
... ......+.. .+|++|+++.+|. + .+|+++|++++.
T Consensus 622 -~~~----~~~a~rp~~-~l~~~k~~~~~~~-~-~~~~~~l~~~~~ 659 (668)
T PLN02260 622 -QAK----VIVAPRSNN-EMDASKLKKEFPE-L-LSIKESLIKYVF 659 (668)
T ss_pred -hhh----HhhCCCccc-cccHHHHHHhCcc-c-cchHHHHHHHHh
Confidence 000 011123334 7999999888888 4 489999998764
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=219.30 Aligned_cols=229 Identities=20% Similarity=0.216 Sum_probs=133.2
Q ss_pred EEcCchhHHHHHHHHHHhhCC-CeEEEEecCChh---hhcccccccc---------CCCCCeeEEeCCCCCh------hH
Q 016370 22 MIGAGGFIGSHLCEKILLETP-HKILALDVYNDK---IKHLLEPESQ---------TGADRIQFHRLNIKHD------SR 82 (390)
Q Consensus 22 ItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~---~~~~~~~~~~---------~~~~~i~~~~~D~~d~------~~ 82 (390)
|||||||+|++|+++|++++. .+|+++.|..+. .+.+.+.... ...++++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999832 399999998743 2222111100 0157999999999964 56
Q ss_pred HHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 83 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+..+.+++|+|||+|+.++ .........+.|+.||++|++.|.+.. ++|+|+||+.+.+...+.. .+....
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~---~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~-~~~~~~---- 152 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVN---FNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTI-EEKVYP---- 152 (249)
T ss_dssp HHHHHHH--EEEE--SS-S---BS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-H----
T ss_pred hhccccccceeeecchhhh---hcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcc-cccccc----
Confidence 7788788999999999885 334455678899999999999999777 8999999966655544221 111000
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
+++ ....+.....+.|..||+.+|+++++++++.|++++|+||+.|+|..... .......+...+.
T Consensus 153 ------~~~--~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G------~~~~~~~~~~~~~ 218 (249)
T PF07993_consen 153 ------EEE--DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTG------WWNSDDFFPYLLR 218 (249)
T ss_dssp ------HH----EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---------TTBHHHHHHH
T ss_pred ------ccc--ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCc------eeeccchHHHHHH
Confidence 000 00111223456899999999999999988889999999999999933321 1111111333333
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHH
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAV 272 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 272 (390)
..+..+......++.+...|+++||.+|++|
T Consensus 219 ~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 219 SCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 3334443333455556679999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=208.98 Aligned_cols=214 Identities=12% Similarity=0.176 Sum_probs=159.3
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh------cc-cc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI------KM-AD 91 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~------~~-~d 91 (390)
+||||||||+||++++++|+++ |++|++++|+++... ..+++.+.+|+.|++.+..++ ++ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~-g~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA-SVPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC-CCcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 4899999999999999999998 999999999876432 136778889999999999998 56 99
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
+|||+++... + ......+++++|++.| +|||++||..++...
T Consensus 70 ~v~~~~~~~~------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~------------------------ 112 (285)
T TIGR03649 70 AVYLVAPPIP------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG------------------------ 112 (285)
T ss_pred EEEEeCCCCC------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC------------------------
Confidence 9999986421 1 1234568999999999 999999986542110
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
..+...|.+++.. .+++++++||+.+|+.... .+ +...+.....+
T Consensus 113 ----------------~~~~~~~~~l~~~---~gi~~tilRp~~f~~~~~~-------------~~---~~~~~~~~~~~ 157 (285)
T TIGR03649 113 ----------------PAMGQVHAHLDSL---GGVEYTVLRPTWFMENFSE-------------EF---HVEAIRKENKI 157 (285)
T ss_pred ----------------chHHHHHHHHHhc---cCCCEEEEeccHHhhhhcc-------------cc---cccccccCCeE
Confidence 0122234444321 4899999999998864321 00 11122333444
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCccc
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~ 318 (390)
. .+.++..++||+++|+|+++..++..+. ..++.|+++++ +.+|+.|+++.+.+.+|++......
T Consensus 158 ~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~-~~~~~~~l~g~-~~~s~~eia~~l~~~~g~~v~~~~~ 222 (285)
T TIGR03649 158 Y-SATGDGKIPFVSADDIARVAYRALTDKV-APNTDYVVLGP-ELLTYDDVAEILSRVLGRKITHVKL 222 (285)
T ss_pred E-ecCCCCccCcccHHHHHHHHHHHhcCCC-cCCCeEEeeCC-ccCCHHHHHHHHHHHhCCceEEEeC
Confidence 3 3457788999999999999999999864 35679999997 7999999999999999986554443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=185.14 Aligned_cols=316 Identities=19% Similarity=0.199 Sum_probs=229.8
Q ss_pred CCCC-EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-----hccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 15 IKPV-TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-----KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 15 ~~~~-~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
++.+ ..||||-||.=|++|++.|+.+ ||+|.++.|+++.. .++-.-.............+|++|...+..++.
T Consensus 25 ~r~rkvALITGItGQDGSYLaEfLL~K-gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 25 FRPRKVALITGITGQDGSYLAEFLLSK-GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred cccceEEEEecccCCCchHHHHHHHhC-CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 4454 5899999999999999999999 99999999876532 112111111133567889999999999999987
Q ss_pred c--ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC----CcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 89 M--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 89 ~--~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
. ++-|+|+|+..+...+.+-|+-.-++...||++|+++.+.++ .||-..||...||...+.|-.|.+|+.
T Consensus 104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFy---- 179 (376)
T KOG1372|consen 104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFY---- 179 (376)
T ss_pred ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCC----
Confidence 5 999999999998777777777777889999999999999887 689999999999999888888888884
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecC---CCCCCCCCCCCCCCCchhhHHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG---PRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G---~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
|+++|+.+|..+--++..+...+++-.|- |++|. |..+ -+.++.-+..
T Consensus 180 ------------------PRSPYa~aKmy~~WivvNyREAYnmfAcN---GILFNHESPRRG--------enFVTRKItR 230 (376)
T KOG1372|consen 180 ------------------PRSPYAAAKMYGYWIVVNYREAYNMFACN---GILFNHESPRRG--------ENFVTRKITR 230 (376)
T ss_pred ------------------CCChhHHhhhhheEEEEEhHHhhcceeec---cEeecCCCCccc--------cchhhHHHHH
Confidence 88899999988876666665555543332 33333 3322 0122333333
Q ss_pred HHHHHhcCC-CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCccc
Q 016370 240 FSNNLLRRQ-PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318 (390)
Q Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~ 318 (390)
-+.++.-++ .-...|+-+..|||=|..|-++++..++++. ...-|.+..+ +..|++|+++.--..+|+...+.-.
T Consensus 231 svakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d---~PdDfViATg-e~hsVrEF~~~aF~~ig~~l~Weg~ 306 (376)
T KOG1372|consen 231 SVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQD---SPDDFVIATG-EQHSVREFCNLAFAEIGEVLNWEGE 306 (376)
T ss_pred HHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcC---CCCceEEecC-CcccHHHHHHHHHHhhCcEEeeccc
Confidence 333343333 2333478888999999999999999999986 4678999997 8999999999988888854433311
Q ss_pred CCCccc--------CC-cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHH
Q 016370 319 EEPTVD--------VS-SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370 (390)
Q Consensus 319 ~~~~~~--------~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 370 (390)
...... +. ..+++ ++........|.+|+++.|||+|++++.+.+++++..
T Consensus 307 gv~~~~~n~~g~v~V~v~~kYy--RPtEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 307 GVDEVGKNDDGVVRVKVDPKYY--RPTEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred ccccccccCCceEEEEeccccc--CcchhhhhcCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 111000 00 01111 1233445578999999999999999999999998853
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=192.75 Aligned_cols=261 Identities=18% Similarity=0.176 Sum_probs=175.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc---ccc------ccccCCCCCeeEEeCCCC------ChhH
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH---LLE------PESQTGADRIQFHRLNIK------HDSR 82 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~---~~~------~~~~~~~~~i~~~~~D~~------d~~~ 82 (390)
++||+||||||+|++|+++|+.+...+|+|+.|..+.... +.+ ...+...++++++.||+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 5799999999999999999999867899999997763222 111 112235689999999998 5678
Q ss_pred HHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 83 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+.++.+.+|.|||+|+.++ +.....+....||.||..+++.|.... |.++|+||.+|+......-..++...
T Consensus 81 ~~~La~~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~---- 153 (382)
T COG3320 81 WQELAENVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDE---- 153 (382)
T ss_pred HHHHhhhcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccc----
Confidence 8999889999999999885 334455667799999999999999887 88999999999876543222111110
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
+.+ .......+.+.|+.||+.+|.+++..... |++++|+||++|.|+...+. -....++..++
T Consensus 154 --------~~~-~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~-------~n~~D~~~Rlv 216 (382)
T COG3320 154 --------ISP-TRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGA-------LNTRDFLTRLV 216 (382)
T ss_pred --------ccc-cccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCc-------cccchHHHHHH
Confidence 000 01122235678999999999999998765 99999999999999876321 11234555666
Q ss_pred HHHhcCCCeEEecCCcceeeeeeH-----------HHHHHHHHHHHhCCCCCCCceEEe-cCCCCcccHHHHHHHHHH
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYI-----------KDAIEAVLLMIENPARANGHIFNV-GNPHNEVTVRQLAEMMTE 307 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v-----------~D~a~~~~~~l~~~~~~~~~~~nv-~~~~~~~s~~~l~~~i~~ 307 (390)
..+..-+.++- .....+.+.+ .-+++++..+..++.... ..|++ .-| ..+...++.+.+.+
T Consensus 217 ~~~~~lg~~P~---~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f-~~~~~~~~~-~~i~l~~~~~w~~~ 289 (382)
T COG3320 217 LGLLQLGIAPD---SEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRF-NQLHMLTHP-DEIGLDEYVDWLIS 289 (382)
T ss_pred HHHHHhCCCCC---cccchhhCccceeeEEeehhhhhHHHHHHHhccCccchh-hheecccCC-CccchhHHHHhHhh
Confidence 65555433321 1122333333 333334444443332112 23332 224 58889998888877
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-24 Score=190.44 Aligned_cols=235 Identities=19% Similarity=0.213 Sum_probs=165.7
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhh-c
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLI-K 88 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~-~ 88 (390)
+..-.++|+||||||||+||++++++|+++ |++|+++.|+.+........ ..+++++.+|+.| .+.+...+ .
T Consensus 11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~l~~~~~~ 84 (251)
T PLN00141 11 DAENVKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQ-----DPSLQIVRADVTEGSDKLVEAIGD 84 (251)
T ss_pred ccccccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhccc-----CCceEEEEeeCCCCHHHHHHHhhc
Confidence 444456789999999999999999999998 99999999987654332211 2368999999998 46777777 5
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
++|+|||+++.... .++...++.|..++.++++++++.+ ++||++||..+|+...+.+..+....
T Consensus 85 ~~d~vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~---------- 150 (251)
T PLN00141 85 DSDAVICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIF---------- 150 (251)
T ss_pred CCCEEEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhH----------
Confidence 89999999876421 1223345688899999999999988 99999999999986432221110000
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
..+...|..+|..+|++++ ..+++++++||+.++++... +
T Consensus 151 -----------~~~~~~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~-------------------------~ 190 (251)
T PLN00141 151 -----------LNLFGLTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPT-------------------------G 190 (251)
T ss_pred -----------HHHHHHHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCC-------------------------c
Confidence 0111234567888888774 35899999999999976422 1
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC--CCcccHHHHHHHHHH
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP--HNEVTVRQLAEMMTE 307 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~--~~~~s~~~l~~~i~~ 307 (390)
.+.+.........+|+.+|+|+++..++..+. ..+.++.+.+. +...++.+++..+++
T Consensus 191 -~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 191 -NIVMEPEDTLYEGSISRDQVAEVAVEALLCPE-SSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred -eEEECCCCccccCcccHHHHHHHHHHHhcChh-hcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 11111111122357999999999999998865 34567777752 135788888887764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=231.90 Aligned_cols=276 Identities=17% Similarity=0.191 Sum_probs=185.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhC---CCeEEEEecCChhhhcccccc---------ccCCCCCeeEEeCCCCC----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLET---PHKILALDVYNDKIKHLLEPE---------SQTGADRIQFHRLNIKH---- 79 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~---g~~V~~~~r~~~~~~~~~~~~---------~~~~~~~i~~~~~D~~d---- 79 (390)
..++|||||||||+|++|++.|++++ .++|+++.|.........+.. ......+++++.+|+.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 35799999999999999999999873 388999999754322111100 00112478999999974
Q ss_pred --hhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 80 --DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 80 --~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+.+..+..++|+|||+|+.... ..........|+.|+.+++++|.+.+ ++|+|+||.++|+........+..
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~- 1125 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL- 1125 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh-
Confidence 45677777789999999998742 22333344579999999999999888 899999999999753211100000
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.. .. .....|+.... .....+.+.|+.+|+.+|.++..+.+ .|++++++||+.|||+..... .....+
T Consensus 1126 ~~-~~-~~~~~e~~~~~--~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~-------~~~~~~ 1193 (1389)
T TIGR03443 1126 VQ-AG-GAGIPESDDLM--GSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGA-------TNTDDF 1193 (1389)
T ss_pred hh-cc-CCCCCcccccc--cccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCC-------CCchhH
Confidence 00 00 00011111000 01112445799999999999988755 499999999999999965411 112334
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcc
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~ 312 (390)
+..++.....-+. .++....++|++|+|+|++++.++.++.. ..+.+||++++ ..+++.++++.+.+. |..
T Consensus 1194 ~~~~~~~~~~~~~---~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~-g~~ 1265 (1389)
T TIGR03443 1194 LLRMLKGCIQLGL---IPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH-PRIRFNDFLGTLKTY-GYD 1265 (1389)
T ss_pred HHHHHHHHHHhCC---cCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC-CCCcHHHHHHHHHHh-CCC
Confidence 5555544433222 22445578999999999999999876531 23468999997 689999999999764 543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=189.98 Aligned_cols=240 Identities=17% Similarity=0.173 Sum_probs=170.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|+||||||+|+||++++++|+++ |++|+++.|++.....+... ...++.++.+|++|.+.+.+++. .+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKAR----YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh----ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999998 99999999987655443321 12478899999999998887765 37
Q ss_pred cEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 91 DLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
|+|||+||........ .+....+++|+.++.++++++ ++.+ .++|++||.......
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 142 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY--------------- 142 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC---------------
Confidence 9999999987543221 234457779999999999987 5555 899999996432111
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeeccee---cCCCCCCCCCCCCCCCCchh
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNW---IGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i---~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+.+.|+.+|...|.+++.+.++ ++++++++||+.+ ||++.... .+......
T Consensus 143 ------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~----~~~~~~~~ 200 (276)
T PRK06482 143 ------------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRG----APLDAYDD 200 (276)
T ss_pred ------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccccccc----CCCccccc
Confidence 02347999999999999888755 5899999999988 55543210 00000011
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhc
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~ 311 (390)
.....+.+....+++.+ +.+++|++++++.++..+. .+..||++++ +..+..++++.+.+.++.
T Consensus 201 ~~~~~~~~~~~~~~~~~---------~~d~~~~~~a~~~~~~~~~--~~~~~~~g~~-~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK06482 201 TPVGDLRRALADGSFAI---------PGDPQKMVQAMIASADQTP--APRRLTLGSD-AYASIRAALSERLAALEA 264 (276)
T ss_pred hhhHHHHHHHhhccCCC---------CCCHHHHHHHHHHHHcCCC--CCeEEecChH-HHHHHHHHHHHHHHHHHH
Confidence 11111222222222222 3468999999999998653 4568999996 788888888887777653
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=179.59 Aligned_cols=243 Identities=19% Similarity=0.307 Sum_probs=194.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
++.+..+-|+|||||+|++++.+|.+. |-+|++--|..+ ...+++-..+ ...+-+...|++|++.++++++...+
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~-GSQviiPyR~d~~~~r~lkvmGd---LGQvl~~~fd~~DedSIr~vvk~sNV 133 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKM-GSQVIIPYRGDEYDPRHLKVMGD---LGQVLFMKFDLRDEDSIRAVVKHSNV 133 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhc-CCeEEEeccCCccchhheeeccc---ccceeeeccCCCCHHHHHHHHHhCcE
Confidence 355667889999999999999999999 999999877553 2333322211 24677889999999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
|||+.|-- +......+.++|+.+...|+..|++.| .|||++|+-..- .
T Consensus 134 VINLIGrd----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v-------------- 182 (391)
T KOG2865|consen 134 VINLIGRD----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------V-------------- 182 (391)
T ss_pred EEEeeccc----cccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------c--------------
Confidence 99999853 444445677899999999999999999 999999985410 0
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
...+-|-.+|.++|..+++.. -+.||+||+.|||..++ ++.++.....+-.+++
T Consensus 183 --------~s~Sr~LrsK~~gE~aVrdaf----PeAtIirPa~iyG~eDr--------------fln~ya~~~rk~~~~p 236 (391)
T KOG2865|consen 183 --------KSPSRMLRSKAAGEEAVRDAF----PEATIIRPADIYGTEDR--------------FLNYYASFWRKFGFLP 236 (391)
T ss_pred --------cChHHHHHhhhhhHHHHHhhC----Ccceeechhhhcccchh--------------HHHHHHHHHHhcCcee
Confidence 122468999999999998865 46899999999998765 7777777777778888
Q ss_pred EecCCc-ceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 252 LVDGGQ-SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 252 ~~~~~~-~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+++.|. .....+||-|+|++|..++..++ +.|++|...+| ......|+++.+-+...........+
T Consensus 237 L~~~GekT~K~PVyV~DVaa~IvnAvkDp~-s~Gktye~vGP-~~yql~eLvd~my~~~~~~~ry~r~~ 303 (391)
T KOG2865|consen 237 LIGKGEKTVKQPVYVVDVAAAIVNAVKDPD-SMGKTYEFVGP-DRYQLSELVDIMYDMAREWPRYVRLP 303 (391)
T ss_pred eecCCcceeeccEEEehHHHHHHHhccCcc-ccCceeeecCC-chhhHHHHHHHHHHHHhhccccccCC
Confidence 887664 45689999999999999999986 68999999999 69999999999888766544333333
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=174.94 Aligned_cols=308 Identities=15% Similarity=0.156 Sum_probs=224.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
+.-+|||||+-|.+|..++..|...-|-+ |+.-+...+ ..... ..-.++..|+.|...+++++-+ +|.
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP-p~~V~--------~~GPyIy~DILD~K~L~eIVVn~RIdW 113 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP-PANVT--------DVGPYIYLDILDQKSLEEIVVNKRIDW 113 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC-chhhc--------ccCCchhhhhhccccHHHhhcccccce
Confidence 44589999999999999999999985655 555443322 22221 3456788999999999998875 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccC-CCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~-~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
+||+.+..+. ..+.+...+.++|+.|..|+++.|++++-++...||.+.||+... .|.+
T Consensus 114 L~HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTP------------------- 173 (366)
T KOG2774|consen 114 LVHFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTP------------------- 173 (366)
T ss_pred eeeHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCC-------------------
Confidence 9999987753 234456678889999999999999999988888999999998642 1111
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
.-.+..|+..||.||..+|.+-+.+..++|+++.++|++.++.... |..+.+......+..+++++.-.
T Consensus 174 ---dltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~--------pgggttdya~A~f~~Al~~gk~t 242 (366)
T KOG2774|consen 174 ---DLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK--------PGGGTTDYAIAIFYDALQKGKHT 242 (366)
T ss_pred ---CeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCC--------CCCCcchhHHHHHHHHHHcCCcc
Confidence 1123458889999999999999999999999999999998876422 22223333333344444433434
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (390)
.+-.++.+..++|..|+-++++..+..+++ ...++||+++ ..++..|++..+.+..+..........
T Consensus 243 Cylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~--~sftpee~~~~~~~~~p~~~i~y~~~s---------- 310 (366)
T KOG2774|consen 243 CYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG--FSFTPEEIADAIRRVMPGFEIDYDICT---------- 310 (366)
T ss_pred cccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeece--eccCHHHHHHHHHhhCCCceeecccch----------
Confidence 444567789999999999999999988653 2457999999 589999999999987653221111100
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.....+.+...+|.+.+|++..|+..+.+...+.-++.-.+.++.
T Consensus 311 -rq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~n~~ 355 (366)
T KOG2774|consen 311 -RQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKSNLK 355 (366)
T ss_pred -hhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHhhhh
Confidence 112246677889999999999998888887777766665555543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=177.24 Aligned_cols=182 Identities=27% Similarity=0.366 Sum_probs=144.4
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEeccc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAI 99 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~~ 99 (390)
|+|+||||++|+.++++|+++ |++|+++.|++++... ..+++++.+|+.|.+.+.+++.++|+|||+++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 799999999999999999999 8999999999876654 259999999999999999999999999999975
Q ss_pred cCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCC
Q 016370 100 CTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI 178 (390)
Q Consensus 100 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~ 178 (390)
... ....++++++++++.+ +|+|++||..+|+...........+
T Consensus 71 ~~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~---------------------- 115 (183)
T PF13460_consen 71 PPK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKP---------------------- 115 (183)
T ss_dssp TTT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCG----------------------
T ss_pred hcc-------------cccccccccccccccccccceeeeccccCCCCCccccccccc----------------------
Confidence 421 1677889999999999 9999999999998654321111111
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcc
Q 016370 179 EKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258 (390)
Q Consensus 179 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (390)
....|...|..+|+.++ +.+++++++||+.+||+.... ..+ +...+..
T Consensus 116 --~~~~~~~~~~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~-------------------------~~~-~~~~~~~ 163 (183)
T PF13460_consen 116 --IFPEYARDKREAEEALR----ESGLNWTIVRPGWIYGNPSRS-------------------------YRL-IKEGGPQ 163 (183)
T ss_dssp --GGHHHHHHHHHHHHHHH----HSTSEEEEEEESEEEBTTSSS-------------------------EEE-ESSTSTT
T ss_pred --chhhhHHHHHHHHHHHH----hcCCCEEEEECcEeEeCCCcc-------------------------eeE-EeccCCC
Confidence 11368899999988884 358999999999999986430 000 1113445
Q ss_pred eeeeeeHHHHHHHHHHHHhC
Q 016370 259 QRTFIYIKDAIEAVLLMIEN 278 (390)
Q Consensus 259 ~~~~i~v~D~a~~~~~~l~~ 278 (390)
..++|+.+|+|++++.++++
T Consensus 164 ~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 164 GVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp SHCEEEHHHHHHHHHHHHH-
T ss_pred CcCcCCHHHHHHHHHHHhCC
Confidence 66999999999999999874
|
... |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=183.78 Aligned_cols=231 Identities=14% Similarity=0.140 Sum_probs=160.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
.++++++|||||+|+||+++++.|+++ |++|++++|+++........... ....+.++.+|++|.+.+..++.+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999998 99999999987554433221111 124578899999999988877663
Q ss_pred ---ccEEEEeccccCCccc----cCChhHHHHHhhhh----HHHHHHHH-HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADY----NTRPLDTIYSNFID----ALPVVKYC-SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~----~~~l~~~~-~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|+|||+|+....... .......+++|+.+ +..+++++ +..+ +++|++||...+...
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~---------- 151 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS---------- 151 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC----------
Confidence 8999999998643221 12334566789999 66777777 6666 899999996433211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+.+.|+.+|...+.+++.++.+ .+++++++||+.+++|...
T Consensus 152 -----------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~------------ 196 (262)
T PRK13394 152 -----------------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD------------ 196 (262)
T ss_pred -----------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh------------
Confidence 02346999999999988887655 4799999999999998532
Q ss_pred hhhHHHHHHHHhc---CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLR---RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..+......... .....+++.+...++|++++|++++++.++.... ...++.|++.++
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g 258 (262)
T PRK13394 197 -KQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG 258 (262)
T ss_pred -hhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence 111111000000 0000011223445789999999999999998643 234788999885
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=181.83 Aligned_cols=226 Identities=17% Similarity=0.176 Sum_probs=155.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
.+++||||||+|+||++++++|+++ |++|++++|+... ...+...........+.++.+|++|.+.+..+++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAA-GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999998 9999999986432 22211110010124588899999999988887763
Q ss_pred --ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||....... ..+....++.|+.++.++++++... +..++++|+.. + ..|.
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~-- 150 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--A---------ERPL-- 150 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--h---------cCCC--
Confidence 7999999997543211 2235567889999999999988642 24555555421 1 1111
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
.|.+.|+.+|..+|.+++.+..+. +++++++||+.++||... ..+..
T Consensus 151 --------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~---------~~~~~-- 199 (249)
T PRK09135 151 --------------------KGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG---------NSFDE-- 199 (249)
T ss_pred --------------------CCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc---------ccCCH--
Confidence 245589999999999999987664 599999999999999753 11111
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCccc
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s 297 (390)
.+......+.++.. +.+++|+|+++..++.......+++||++++ +.++
T Consensus 200 -~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g-~~~~ 248 (249)
T PRK09135 200 -EARQAILARTPLKR---------IGTPEDIAEAVRFLLADASFITGQILAVDGG-RSLT 248 (249)
T ss_pred -HHHHHHHhcCCcCC---------CcCHHHHHHHHHHHcCccccccCcEEEECCC-eecc
Confidence 12223333333221 1248999999976665433346889999997 5544
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-23 Score=191.45 Aligned_cols=298 Identities=21% Similarity=0.233 Sum_probs=195.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-C-CeEEEEecCChhh---hcc-----------ccccccCCCCCeeEEeCCCC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-P-HKILALDVYNDKI---KHL-----------LEPESQTGADRIQFHRLNIK 78 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-g-~~V~~~~r~~~~~---~~~-----------~~~~~~~~~~~i~~~~~D~~ 78 (390)
+.+|+|||||||||+|..|++.|++.. . .+++++.|..... +++ ..........++..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 467999999999999999999999852 2 4688888865322 111 11112224468888999998
Q ss_pred C------hhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCC
Q 016370 79 H------DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 79 d------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~ 150 (390)
+ ..+++.+..++|+|||+||.+. ..+.....+.+|+.||+++++.|++.. +-+||+||+.+. ...+..
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvr---Fde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i 165 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVR---FDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHI 165 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeec---cchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccc
Confidence 4 3566667778999999999874 444555688899999999999999998 899999999876 222221
Q ss_pred CCCCCCCCC--Ccccc-ccccCCCCcc---cCC--CCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCC
Q 016370 151 LPKDSPLRQ--DPAYY-VLKEDASPCI---FGS--IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDF 222 (390)
Q Consensus 151 ~~e~~~~~~--~~~~~-~~~e~~~~~~---~~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~ 222 (390)
.+.-.+... ++... ..+++..... ..+ .....+.|..+|..+|.++.+.. .++|.+|+||+.|......+
T Consensus 166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP 243 (467)
T KOG1221|consen 166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP 243 (467)
T ss_pred cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC
Confidence 111122221 11110 1112111110 111 12346789999999999998865 57999999999998876654
Q ss_pred CCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC----CCCceEEecCC-CCccc
Q 016370 223 IPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR----ANGHIFNVGNP-HNEVT 297 (390)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~----~~~~~~nv~~~-~~~~s 297 (390)
.++|..--.+..+++ -..-+|.--.+..+.+...|+|.+|.++.+++.+.-.... ....+||++++ .++++
T Consensus 244 ~pGWidn~~gp~g~i----~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t 319 (467)
T KOG1221|consen 244 FPGWIDNLNGPDGVI----IGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVT 319 (467)
T ss_pred CCCccccCCCCceEE----EEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCccc
Confidence 433322212222211 1112222222346778889999999999999977633211 12459999976 47999
Q ss_pred HHHHHHHHHHHhhcccCCcccCCCc
Q 016370 298 VRQLAEMMTEVYAKVSGEAALEEPT 322 (390)
Q Consensus 298 ~~~l~~~i~~~~g~~~~~~~~~~~~ 322 (390)
+.++.+...+.+.+.+....++.|.
T Consensus 320 ~~~~~e~~~~~~~~~Pl~~~iw~P~ 344 (467)
T KOG1221|consen 320 WGDFIELALRYFEKIPLEKMIWYPF 344 (467)
T ss_pred HHHHHHHHHHhcccCCcccceeccC
Confidence 9999999999876544444444443
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=179.51 Aligned_cols=222 Identities=15% Similarity=0.145 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.|++|+||||||+|+||++|+++|+++ |++|+++.|+..... .+.... .....++.++.+|+.|.+.+.+++.
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARA-GADVVVHYRSDEEAAEELVEAV-EALGRRAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHH-HhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999 999988777654321 111110 0113468899999999998888775
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ........++.|+.++.++++.+ ++.+ +++|++||...+....
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~--------- 151 (249)
T PRK12825 81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP--------- 151 (249)
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC---------
Confidence 4799999999664322 22234567788999999888877 4555 8999999987653321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+++.++++ .+++++++||+.++|+....
T Consensus 152 ------------------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~----------- 196 (249)
T PRK12825 152 ------------------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA----------- 196 (249)
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc-----------
Confidence 2236999999999888877654 58999999999999986531
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......... .+ ......+++.+|+++++..++.+.. ...+++|+++++
T Consensus 197 -~~~~~~~~~----~~------~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g 245 (249)
T PRK12825 197 -TIEEAREAK----DA------ETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGG 245 (249)
T ss_pred -ccchhHHhh----hc------cCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence 011111111 00 0112238999999999999997643 246899999986
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-22 Score=178.56 Aligned_cols=226 Identities=15% Similarity=0.195 Sum_probs=156.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+++||||||+|+||+++++.|+++ |++|++++|++.....+...... ...++.++.+|+.|.+++..+++ +
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999 99999999987655443321111 12468889999999986655543 4
Q ss_pred ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+++........ .+....+..|+.++..+++++ ++.+ +++|++||...+....
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~------------- 145 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP------------- 145 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-------------
Confidence 79999999976532221 223455678999988877766 5555 8999999975543321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
..+.|+.+|...+.+.+.++.+ .+++++++||+.+++|... ..+
T Consensus 146 --------------------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~-------------~~~ 192 (255)
T TIGR01963 146 --------------------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE-------------KQI 192 (255)
T ss_pred --------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH-------------HHH
Confidence 1236999999999888877544 3899999999999988421 111
Q ss_pred HHHHHHHhcCCCeE-----EecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLK-----LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~-----~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..... ..+.+.. ....+.+.+++++++|+|++++.++.... ...++.|++.++
T Consensus 193 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g 251 (255)
T TIGR01963 193 ADQAK--TRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG 251 (255)
T ss_pred Hhhhc--ccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence 11000 0000000 01123456689999999999999998642 235789999986
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.4e-22 Score=177.51 Aligned_cols=223 Identities=15% Similarity=0.150 Sum_probs=160.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+|+||||||+|+||.+++++|+++ |++|++++|+............. ....+.++.+|+.|.+.+..+++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999 99999999986544332211111 12458899999999998888876
Q ss_pred -cccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+++..... ....+....++.|+.++.++++++. +.+ +++|++||...++.. .
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~----------~- 150 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG----------Y- 150 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC----------C-
Confidence 489999999887542 2223445678899999999988773 444 789999997654110 0
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|...+.+++.+..+ .+++++++||+.++||.... ....
T Consensus 151 ---------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~---------~~~~ 200 (251)
T PRK12826 151 ---------------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGN---------LGDA 200 (251)
T ss_pred ---------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhh---------cCch
Confidence 12336999999999999887654 48999999999999986531 0001
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
. +........++ ..+++++|+|+++..++..... ..+++|++.++
T Consensus 201 ~---~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 246 (251)
T PRK12826 201 Q---WAEAIAAAIPL---------GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGG 246 (251)
T ss_pred H---HHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 1 11122222222 2478999999999998876432 35899999885
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=188.83 Aligned_cols=236 Identities=14% Similarity=0.170 Sum_probs=164.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc--------cCCCCCeeEEeCCCCChhHHHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES--------QTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
.+.+++||||||+|+||++++++|+++ |++|++++|+......+..... .....++.++.+|+.|.+++..
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 346789999999999999999999999 9999999998766543321100 0011358899999999999999
Q ss_pred hhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 86 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
++.++|+|||++|.... ...+....+++|+.++.+++++|++.+ +|||++||.+++.... ... ..
T Consensus 156 aLggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~~-~~------- 221 (576)
T PLN03209 156 ALGNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PAA-IL------- 221 (576)
T ss_pred HhcCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----ccc-ch-------
Confidence 99999999999986531 112344567899999999999999988 9999999986531110 000 00
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
...+.|...|..+|+.+. ..|+++++||||.++++...+.
T Consensus 222 ---------------~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~--------------------- 261 (576)
T PLN03209 222 ---------------NLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK--------------------- 261 (576)
T ss_pred ---------------hhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccc---------------------
Confidence 122357888999998874 4689999999999998754310
Q ss_pred hcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHH
Q 016370 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~ 306 (390)
. ...+.+...+......+..+|+|++++.++.++....+.+|.+.++ .......+.+++.
T Consensus 262 ~-t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~-~~~p~~~~~~~~~ 321 (576)
T PLN03209 262 E-THNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAE-TTAPLTPMEELLA 321 (576)
T ss_pred c-ccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeC-CCCCCCCHHHHHH
Confidence 0 0011111111111235889999999999999765456889999985 3333334444443
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=175.16 Aligned_cols=228 Identities=15% Similarity=0.156 Sum_probs=156.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
|.+++||||||+|+||++++++|+++ |++|++++|+++....+...... ...++.++.+|+.|.+++.+++.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 99999999987655433221110 13468889999999998888776
Q ss_pred -cccEEEEeccccCCccccC----ChhHHHHHhhhhH----HHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYNT----RPLDTIYSNFIDA----LPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~----~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+|+......... .....++.|+.++ ..++.++++.+ ++||++||...+....
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~----------- 148 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSA----------- 148 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------
Confidence 4899999999765432222 2334566888884 44555555566 8999999975443211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+.+.|+.+|...+.+.+.++.+ .+++++++||+.+++|... .
T Consensus 149 ----------------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~-------------~ 193 (258)
T PRK12429 149 ----------------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR-------------K 193 (258)
T ss_pred ----------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh-------------h
Confidence 2346999999999888776543 4799999999999998543 0
Q ss_pred hHHHHHHHHhcCCCe-----EEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPL-----KLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+...... .+.+. ..++.....+.+++++|+|+++..++.... ...++.|++.++
T Consensus 194 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 194 QIPDLAKE--RGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred hhhhhccc--cCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 11110000 01110 011122234679999999999999987642 234788999885
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-21 Score=174.20 Aligned_cols=244 Identities=16% Similarity=0.127 Sum_probs=169.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
.+|+||||||+|+||++++++|+++ |++|++++|+++....+... ....+.++.+|++|.+++..++.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEK----YGDRLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHh----ccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999998 99999999987665443221 12467889999999988877765
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||....... .++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------ 144 (275)
T PRK08263 77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP------------ 144 (275)
T ss_pred CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC------------
Confidence 37999999998754222 2345567889999987777765 5555 7999999976654321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
..+.|+.+|...+.+.+.++.+ .|++++++||+.+..+....... ..... ..
T Consensus 145 ---------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~---~~~~~-~~ 199 (275)
T PRK08263 145 ---------------------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAK---RATPL-DA 199 (275)
T ss_pred ---------------------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccc---cCCCc-hh
Confidence 2236999999999988887654 68999999999887765420000 00000 00
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeee-eeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcc
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTF-IYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~ 312 (390)
...+...... ......+ +.++|+|++++.+++.+. ..++.|+.+++ ..+++.++.+.+.+..+++
T Consensus 200 ~~~~~~~~~~---------~~~~~~~~~~p~dva~~~~~l~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (275)
T PRK08263 200 YDTLREELAE---------QWSERSVDGDPEAAAEALLKLVDAEN-PPLRLFLGSGV-LDLAKADYERRLATWEEWE 265 (275)
T ss_pred hhhHHHHHHH---------HHHhccCCCCHHHHHHHHHHHHcCCC-CCeEEEeCchH-HHHHHHHHHHHHHHHHHHH
Confidence 1111111111 1112234 789999999999999864 23444444454 6899999999998865543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.2e-22 Score=174.55 Aligned_cols=221 Identities=17% Similarity=0.219 Sum_probs=162.7
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|+||||.+|+++++.|++. +++|+++.|+++.. ..+.. .+++++.+|+.|.+.+.++++++|+||.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~-~~~V~~l~R~~~~~~~~~l~~-------~g~~vv~~d~~~~~~l~~al~g~d~v~~~~ 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA-GFSVRALVRDPSSDRAQQLQA-------LGAEVVEADYDDPESLVAALKGVDAVFSVT 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TGCEEEEESSSHHHHHHHHHH-------TTTEEEES-TT-HHHHHHHHTTCSEEEEES
T ss_pred CEEECCccHHHHHHHHHHHhC-CCCcEEEEeccchhhhhhhhc-------ccceEeecccCCHHHHHHHHcCCceEEeec
Confidence 799999999999999999997 99999999988432 22222 478999999999999999999999999887
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+... ...+....+++++|++.| ++||+.|....+.... ..
T Consensus 73 ~~~~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~-----~~---------------------- 113 (233)
T PF05368_consen 73 PPSH------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESS-----GS---------------------- 113 (233)
T ss_dssp SCSC------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTT-----TS----------------------
T ss_pred Ccch------------hhhhhhhhhHHHhhhccccceEEEEEecccccccc-----cc----------------------
Confidence 6442 112455788999999999 9998766544331110 00
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH--HHhcC-CCeEEe
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN--NLLRR-QPLKLV 253 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~ 253 (390)
.|....-..|...|+++++ .+++++++|++.++.... ..+.. ..... ..+.+.
T Consensus 114 ---~p~~~~~~~k~~ie~~l~~----~~i~~t~i~~g~f~e~~~-----------------~~~~~~~~~~~~~~~~~~~ 169 (233)
T PF05368_consen 114 ---EPEIPHFDQKAEIEEYLRE----SGIPYTIIRPGFFMENLL-----------------PPFAPVVDIKKSKDVVTLP 169 (233)
T ss_dssp ---TTHHHHHHHHHHHHHHHHH----CTSEBEEEEE-EEHHHHH-----------------TTTHHTTCSCCTSSEEEEE
T ss_pred ---cccchhhhhhhhhhhhhhh----ccccceeccccchhhhhh-----------------hhhcccccccccceEEEEc
Confidence 1222345678888888855 389999999998775421 11111 11122 246677
Q ss_pred cCCcceeeee-eHHHHHHHHHHHHhCCCCC-CCceEEecCCCCcccHHHHHHHHHHHhhccc
Q 016370 254 DGGQSQRTFI-YIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 254 ~~~~~~~~~i-~v~D~a~~~~~~l~~~~~~-~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~ 313 (390)
++++....++ ..+|+++++..++.++... .++.+.+++ +.+|+.|+++.+.+.+|++.
T Consensus 170 ~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~--~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 170 GPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG--ETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp TTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG--GEEEHHHHHHHHHHHHTSEE
T ss_pred cCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC--CCCCHHHHHHHHHHHHCCcc
Confidence 7777777775 9999999999999998754 567888877 48999999999999999864
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-21 Score=172.77 Aligned_cols=233 Identities=15% Similarity=0.123 Sum_probs=156.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++++|++|||||+|+||++++++|.++ |++|++++|++... .+..... .....+.++.+|++|.+++.++++
T Consensus 4 ~~~~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK12823 4 QRFAGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSELVH-EVAAELR-AAGGEALALTADLETYAGAQAAMAAAVE 80 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchHHH-HHHHHHH-hcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence 3467889999999999999999999999 99999999975321 1111000 012457789999999888777665
Q ss_pred ---cccEEEEeccccCC--c---cccCChhHHHHHhhhhHHHHH----HHHHhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTP--A---DYNTRPLDTIYSNFIDALPVV----KYCSENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~--~---~~~~~~~~~~~~nv~~~~~l~----~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||.... + ....+....+++|+.++..++ ..+++.+ .++|++||...|+..
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 151 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN--------- 151 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC---------
Confidence 38999999985421 1 112234456778888776554 4444555 789999998765321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
...|+.+|...+.+.+.++.+. ++++++++|+.+++|..........+...
T Consensus 152 --------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 205 (260)
T PRK12823 152 --------------------------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQ 205 (260)
T ss_pred --------------------------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccccc
Confidence 1259999999999999887665 89999999999999742100000000011
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.......+......+.++.. +.+++|+|+++..++.... ...++.|++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~---------~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg 257 (260)
T PRK12823 206 EKAWYQQIVDQTLDSSLMKR---------YGTIDEQVAAILFLASDEASYITGTVLPVGGG 257 (260)
T ss_pred ccccHHHHHHHHhccCCccc---------CCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence 11233444444444444332 3358999999999886542 235789999875
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-21 Score=174.03 Aligned_cols=241 Identities=13% Similarity=0.140 Sum_probs=167.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
|++|+||||||+|+||+++++.|+++ |++|++++|+++............ ...++.++.+|+.|.+++..+++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999 999999999865543322211100 02467889999999998888776
Q ss_pred --cccEEEEeccccCC--cc---ccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTP--AD---YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~--~~---~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+||.... .. ..++....+++|+.++..+++++.+. + .++|++||...+....
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------- 154 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR--------- 154 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC---------
Confidence 48999999986532 11 11234456778999999998766442 3 5899999977643321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+.+.|+.+|...|.+++.+..+. +++++++||+.+.++..... .
T Consensus 155 ------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~---------~ 201 (276)
T PRK05875 155 ------------------------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI---------T 201 (276)
T ss_pred ------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc---------c
Confidence 23479999999999999887554 68999999998877643210 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcc----cHHHHHHHHHHH
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEV----TVRQLAEMMTEV 308 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~----s~~~l~~~i~~~ 308 (390)
. ............+ ...+++++|+|+++..++..+.. ..+++|+++++ +.+ +..++++.+.+.
T Consensus 202 ~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 202 E--SPELSADYRACTP---------LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGG-HMLRRGPDFSSMLEPVFGA 269 (276)
T ss_pred c--CHHHHHHHHcCCC---------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC-eeccCCccHHHHHHHHhhH
Confidence 0 0011111111111 22366799999999999987532 24789999987 565 677777776655
Q ss_pred hh
Q 016370 309 YA 310 (390)
Q Consensus 309 ~g 310 (390)
.+
T Consensus 270 ~~ 271 (276)
T PRK05875 270 DG 271 (276)
T ss_pred HH
Confidence 44
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.8e-21 Score=172.13 Aligned_cols=224 Identities=13% Similarity=0.107 Sum_probs=155.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+|++|||||+|+||+++++.|+++ |++|+++.|+............. ....+.++.+|+++.+++..+++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45679999999999999999999998 99999999876544332211110 12367888999999999987776
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+||........ .+....++.|+.++.++++++. +.+ .+||++||...|....
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------- 154 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP----------- 154 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----------
Confidence 379999999976432222 2334456899999999988764 233 6799999987664321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+.+.|+.+|...|.+++.++++. |++++++|||.+.++... .....
T Consensus 155 ----------------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~---------~~~~~ 203 (274)
T PRK07775 155 ----------------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW---------SLPAE 203 (274)
T ss_pred ----------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc---------cCChh
Confidence 22369999999999999887554 899999999877554211 00011
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.+..++..... .+ ....+.+++++|+|++++.+++++. .+.+||+.=
T Consensus 204 ~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~~~~--~~~~~~~~~ 250 (274)
T PRK07775 204 VIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAETPR--GAHVVNMEV 250 (274)
T ss_pred hhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhcCCC--CCCeeEEee
Confidence 11112221111 01 1223569999999999999998763 456888874
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=172.04 Aligned_cols=223 Identities=15% Similarity=0.138 Sum_probs=159.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|++|||||+|+||.+++++|+++ |++|++++|.+.....+.+.... ....+..+.+|++|.+++..++.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVA-DGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987554333221110 12356788999999988877665
Q ss_pred --cccEEEEeccccCCc-------cccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-------DYNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|+|||+||..... ....+....+..|+.++.++++++... + +++|++||...|..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 151 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY--------- 151 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---------
Confidence 379999999975311 112234456779999999998887653 2 69999999876532
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+.|+.+|.+.|.+++.+++++ ++++++++|+.+..+... .
T Consensus 152 ---------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~---------~ 195 (250)
T PRK07774 152 ---------------------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR---------T 195 (250)
T ss_pred ---------------------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc---------c
Confidence 1269999999999999887654 799999999988776543 0
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
. ....+......+.+... +..++|+|++++.++.... ...+++||+.++ +.+
T Consensus 196 ~---~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g-~~~ 248 (250)
T PRK07774 196 V---TPKEFVADMVKGIPLSR---------MGTPEDLVGMCLFLLSDEASWITGQIFNVDGG-QII 248 (250)
T ss_pred c---CCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhChhhhCcCCCEEEECCC-eec
Confidence 0 01123333333333221 3468999999999987642 236789999986 443
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-21 Score=175.16 Aligned_cols=227 Identities=13% Similarity=0.082 Sum_probs=152.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
.+|+||||||+|+||++++++|+++ |++|++++|++.....+... ...++..+.+|+.|.+.+..+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 77 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEAL----HPDRALARLLDVTDFDAIDAVVADAEATFG 77 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhh----cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999998 99999999987665544321 12468889999999998887776
Q ss_pred cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||......... +....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~------------ 145 (277)
T PRK06180 78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP------------ 145 (277)
T ss_pred CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC------------
Confidence 3799999999864322222 23345789999999999875 3444 7899999975443210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+.+.|+.+|...|.+.+.++.+ .|++++++||+.+.++..+... .........+
T Consensus 146 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~ 202 (277)
T PRK06180 146 ---------------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSM--VRTPRSIADY 202 (277)
T ss_pred ---------------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcccccc--ccCCCCcHhH
Confidence 2347999999999988887654 4899999999999876432100 0000001111
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
. .......... .. .....+..++|+|++++.+++.+. .+..|.++.
T Consensus 203 ~-~~~~~~~~~~---~~---~~~~~~~~~~dva~~~~~~l~~~~--~~~~~~~g~ 248 (277)
T PRK06180 203 D-ALFGPIRQAR---EA---KSGKQPGDPAKAAQAILAAVESDE--PPLHLLLGS 248 (277)
T ss_pred H-HHHHHHHHHH---Hh---hccCCCCCHHHHHHHHHHHHcCCC--CCeeEeccH
Confidence 1 1111111000 00 011235679999999999998763 344454444
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=173.65 Aligned_cols=239 Identities=13% Similarity=0.150 Sum_probs=157.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
|.++++|||||+|+||+++++.|+++ |++|++++|+++....+...... ....++.++.+|++|++++.. +.
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~ 78 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE 78 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence 35678999999999999999999999 99999999987654333221110 012468899999999988765 43
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccc-cccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEV-YGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~v-y~~~~~~~~~e~~~ 156 (390)
.+|+|||+|+........ ++....+++|+.++.++++++ ++.+ .++|++||... ++..
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 148 (280)
T PRK06914 79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP---------- 148 (280)
T ss_pred cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC----------
Confidence 379999999976542222 233456779999988888775 5555 78999998633 3221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+.+.|+.+|...+.+++.++ ...+++++++||+.++++...............
T Consensus 149 ------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~ 204 (280)
T PRK06914 149 ------------------------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSET 204 (280)
T ss_pred ------------------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcccccccccccc
Confidence 23479999999999988876 345899999999999887432100000000000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHH
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~ 299 (390)
.......+..+.... ......+++++|+|++++.++.++. ....|+++++ ..+++.
T Consensus 205 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~~~~~~~--~~~~~~~~~~-~~~~~~ 260 (280)
T PRK06914 205 TSPYKEYMKKIQKHI-------NSGSDTFGNPIDVANLIVEIAESKR--PKLRYPIGKG-VKLMIL 260 (280)
T ss_pred ccchHHHHHHHHHHH-------hhhhhccCCHHHHHHHHHHHHcCCC--CCcccccCCc-hHHHHH
Confidence 000111111111100 0112357889999999999999875 3457999875 455544
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-21 Score=173.81 Aligned_cols=231 Identities=15% Similarity=0.152 Sum_probs=162.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+++||||||+|+||.++++.|+++ |++|++++|+......+... ....+.++.+|++|.+++..+++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAALE----IGPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHH----hCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45679999999999999999999999 99999999987655443321 12358889999999998888776
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeeccc-ccccccCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCE-VYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~-vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+|+...... ..++....+++|+.++.++++++... +.++|++||.. .++.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 147 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE----------- 147 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC-----------
Confidence 3899999999764321 12345567889999999999888542 15799999953 2221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++. ..++++++++|+.++++.... .
T Consensus 148 -----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~----------~ 194 (257)
T PRK07067 148 -----------------------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ----------V 194 (257)
T ss_pred -----------------------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh----------h
Confidence 1334799999999999887765 358999999999999975320 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
...+.... ....+......+++.+...+.+++|+|+++..++.... ...+++|++.++ +.+
T Consensus 195 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg-~~~ 256 (257)
T PRK07067 195 DALFARYE-NRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG-NWM 256 (257)
T ss_pred hhhhhhcc-CCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC-EeC
Confidence 00000000 00000000112233345679999999999999998643 235799999986 554
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=169.34 Aligned_cols=228 Identities=14% Similarity=0.147 Sum_probs=160.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
.+.+|+||||||+|+||.+++++|+++ |++|++++|++.....+...... ...++.++.+|+.|.+++.+++.+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 567899999999999999999999998 99999999987654433221111 123578899999999988888763
Q ss_pred ---ccEEEEeccccCCccccCC----hhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYNTR----PLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~~~----~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+||.......... ....+.+|+.++.++++++.+. + .++|++||...+...
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------- 153 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR----------- 153 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC-----------
Confidence 7999999998653322222 2456669999999999877643 4 789999996432211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
...+.|+.+|...+.+++.++. .+|+++.++||+.+.++.... ...
T Consensus 154 ----------------------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~---------~~~ 202 (255)
T PRK07523 154 ----------------------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAA---------LVA 202 (255)
T ss_pred ----------------------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhh---------hcc
Confidence 0234699999999999988875 458999999999999875320 000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
...+...+....+ ...+..++|+|+++..++.... ...|+.+++.++ ...|
T Consensus 203 --~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg-~~~~ 254 (255)
T PRK07523 203 --DPEFSAWLEKRTP---------AGRWGKVEELVGACVFLASDASSFVNGHVLYVDGG-ITAS 254 (255)
T ss_pred --CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC-eecc
Confidence 0111112222222 1236679999999999987532 235789999886 5443
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=172.75 Aligned_cols=225 Identities=13% Similarity=0.079 Sum_probs=154.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
|.++++|||||+|+||+++++.|+++ |++|+++.|+... ...+...... ....+.++.+|++|.+++..+++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999998 9999999887532 2211110000 12457889999999998887775
Q ss_pred --cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 89 --MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
++|+|||+|+.... ...++...+++|+.++.++++++.+.- .++|++||........ .+..+
T Consensus 82 ~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~~------- 148 (248)
T PRK07806 82 FGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTMP------- 148 (248)
T ss_pred CCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCCc-------
Confidence 48999999986432 223455677899999999999998642 5899999954321100 00000
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
..+.|+.+|...|.+++.++.+ .++++++++|+.+-+|... .+
T Consensus 149 -----------------~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~-----------------~~ 194 (248)
T PRK07806 149 -----------------EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA-----------------TL 194 (248)
T ss_pred -----------------cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh-----------------hh
Confidence 1347999999999999888654 4788999988776655211 11
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
..+...+ .+.........+++++|+|+++..+++... ..+++|+++++
T Consensus 195 ~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~g~~~~i~~~ 242 (248)
T PRK07806 195 LNRLNPG---AIEARREAAGKLYTVSEFAAEVARAVTAPV-PSGHIEYVGGA 242 (248)
T ss_pred hccCCHH---HHHHHHhhhcccCCHHHHHHHHHHHhhccc-cCccEEEecCc
Confidence 1100000 000000112368999999999999999653 57899999997
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=168.29 Aligned_cols=233 Identities=17% Similarity=0.160 Sum_probs=165.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------- 89 (390)
++++|||||+|+||.+++++|+++ |++|++++|++.....+.... ...++.++.+|+.|.+++..++.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAFADAL---GDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999998 999999999876544332211 123688899999999988877763
Q ss_pred ccEEEEeccccCCccccC-C---hhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~-~---~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||++|......... + ....+..|+.++.++++++ .+.+ .++|++||...+...
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 143 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-------------- 143 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC--------------
Confidence 799999999764322211 1 2234568999988888777 3344 789999995432110
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
....|+.+|...+.+++.++.+. +++++++||+.++++.... .. ...
T Consensus 144 --------------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~---------~~-~~~ 193 (257)
T PRK07074 144 --------------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEA---------RV-AAN 193 (257)
T ss_pred --------------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhc---------cc-ccC
Confidence 01159999999999999887554 6999999999998875320 00 000
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCcccHHHHHHHHHH
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTE 307 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s~~~l~~~i~~ 307 (390)
..+....... ...++|++++|+++++..++... ....++.+++.++ ...+..|+++.+..
T Consensus 194 ~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g-~~~~~~~~~~~~~~ 254 (257)
T PRK07074 194 PQVFEELKKW---------YPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGG-LTAGNREMARTLTL 254 (257)
T ss_pred hHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCC-cCcCChhhhhhhcc
Confidence 1122222111 12357999999999999999753 2235788899987 89999999988764
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=167.02 Aligned_cols=221 Identities=12% Similarity=0.110 Sum_probs=155.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
+.++++|||||+|+||++++++|+++ |++|+++.++. ........... ....++.++.+|++|.+.+.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE-GAKVVINYNSSKEAAENLVNELG-KEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEcCCcHHHHHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999998 99998765543 32222211100 0124688899999999998888765
Q ss_pred ---ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+|+....... .......++.|+.++..+++++.. .+ .++|++||...+...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 150 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG----------- 150 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------
Confidence 7999999998653221 145566788999999999888863 33 689999996433211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|.+.+.+++.+..+. ++++++++|+.+.++...
T Consensus 151 ----------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~------------- 195 (247)
T PRK12935 151 ----------------------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA------------- 195 (247)
T ss_pred ----------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh-------------
Confidence 022369999999998887776543 899999999998775322
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
............+ ...+.+++++|++++++.+++......++.||+.++
T Consensus 196 ~~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 196 EVPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG 244 (247)
T ss_pred hccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence 0111111111111 123468999999999999987643346799999985
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-21 Score=176.32 Aligned_cols=222 Identities=12% Similarity=0.066 Sum_probs=154.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
.|.+++||||||+|+||++++++|+++ |++|++++|.............. ...++.++.+|++|.+++.+++.+
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRAVAELRA-QGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999 99999999976544333221111 123577899999999999888763
Q ss_pred ---ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHH----HHhCC-------CcEEEeecccccccccCCCC
Q 016370 90 ---ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKY----CSENN-------KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~----~~~~~-------~~~v~~Ss~~vy~~~~~~~~ 151 (390)
+|+|||+||........ .+....+++|+.++.+++++ +.+.+ .++|++||...+....
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 156 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP---- 156 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence 79999999987543222 33445678999999987665 33332 3799999976654321
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC-----ccEEEeecceecCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG-----LEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
+.+.|+.+|...|.+++.+..+.+ +++..+.|+.+..+
T Consensus 157 -----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~-------- 199 (287)
T PRK06194 157 -----------------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG-------- 199 (287)
T ss_pred -----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc--------
Confidence 223699999999999998877655 34444444433222
Q ss_pred CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHH
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~ 306 (390)
+.....+++..+.+++.+.++|++++|++..+... + .++..|+++.+.
T Consensus 200 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~~s~~dva~~i~ 247 (287)
T PRK06194 200 --------------IWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGS----------------G--KVTAEEVAQLVF 247 (287)
T ss_pred --------------cccccccCchhcccCccccchhhHHHHHHHhhhhc----------------c--CCCHHHHHHHHH
Confidence 11233355666777778888999888887764311 1 267888888888
Q ss_pred HHhh
Q 016370 307 EVYA 310 (390)
Q Consensus 307 ~~~g 310 (390)
+.+.
T Consensus 248 ~~~~ 251 (287)
T PRK06194 248 DAIR 251 (287)
T ss_pred HHHH
Confidence 7664
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-20 Score=168.68 Aligned_cols=239 Identities=9% Similarity=0.027 Sum_probs=159.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
.|.+|++|||||+|+||+++++.|.++ |++|++++|+.+........... ....+.++.+|++|.+++.+++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 367789999999999999999999999 99999999987655433221111 123578899999999988887753
Q ss_pred ---ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|+|||+||........ ++....+++|+.++.++++++. +.+ .++|++||...+...
T Consensus 81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~---------- 150 (275)
T PRK05876 81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN---------- 150 (275)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC----------
Confidence 79999999976432222 2234567899999999888763 332 689999997655332
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+.+.|+.+|...+.+.+.++. ..|+++++++|+.+.++...
T Consensus 151 -----------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------------ 195 (275)
T PRK05876 151 -----------------------AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVA------------ 195 (275)
T ss_pred -----------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccccc------------
Confidence 1334799999985555554443 34899999999999876432
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHH
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~ 308 (390)
...................+.....+++++++|+|++++.++.++ +.|.+.+ ......+.+...+.
T Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~-----~~~~~~~---~~~~~~~~~~~~~~ 261 (275)
T PRK05876 196 -NSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN-----RLYVLPH---AASRASIRRRFERI 261 (275)
T ss_pred -chhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC-----CeEEecC---hhhHHHHHHHHHHH
Confidence 000000000011111122233344568999999999999999864 3555554 23444444444443
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=169.01 Aligned_cols=224 Identities=13% Similarity=0.111 Sum_probs=154.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++++|+||||+|+||++++++|+++ |++|+++ .|+............. ....+.++.+|++|.+.+..+++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLAND-GALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 356689999999999999999999999 9998775 5655433222211100 12467889999999999887776
Q ss_pred ---------cccEEEEeccccCCccccCC----hhHHHHHhhhhHHHHHHHHHhC--C-CcEEEeecccccccccCCCCC
Q 016370 89 ---------MADLTINLAAICTPADYNTR----PLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 ---------~~d~Vih~a~~~~~~~~~~~----~~~~~~~nv~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
++|+|||+||.......... ....+++|+.++.++++++.+. . .++|++||..++....
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~----- 155 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT----- 155 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC-----
Confidence 38999999997654322222 2445669999999999988763 2 5899999987764321
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
+.+.|+.+|.+.|.+.+.++.+ .++++++++|+.+++|....
T Consensus 156 ----------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~------- 200 (254)
T PRK12746 156 ----------------------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK------- 200 (254)
T ss_pred ----------------------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh-------
Confidence 2336999999999988777654 57999999999998875320
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.... ..+....... .....+++++|+|+++..++..... ..+++|++.++
T Consensus 201 --~~~~--~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 201 --LLDD--PEIRNFATNS---------SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred --hccC--hhHHHHHHhc---------CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 0000 0011111111 1123467899999999988876432 25789999875
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-20 Score=166.03 Aligned_cols=221 Identities=16% Similarity=0.179 Sum_probs=156.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
|.+|+||||||+|+||.++++.|+++ |++|++++|++.....+..... .....+.++.+|+.|.+.+..++.+
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEALAAELR-AAGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45679999999999999999999998 9999999998765433221110 0134678889999999888777764
Q ss_pred --ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||++|....... .++....++.|+.++.++++++. +.+ +++|++||.......
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~------------ 148 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN------------ 148 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC------------
Confidence 6999999987643221 12234567789999999888774 455 799999986432111
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+.+.|+.+|...+.+++.++++ .+++++++||+.++++... .
T Consensus 149 ---------------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~-------------~ 194 (246)
T PRK05653 149 ---------------------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE-------------G 194 (246)
T ss_pred ---------------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh-------------h
Confidence 12346999999999888887654 4799999999999998643 1
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+............ ....+++++|+|+++..++.... ...++.|++++|
T Consensus 195 ~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg 243 (246)
T PRK05653 195 LPEEVKAEILKEI---------PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGG 243 (246)
T ss_pred hhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 1111111111111 12457889999999999987532 235789999986
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=169.77 Aligned_cols=226 Identities=13% Similarity=0.092 Sum_probs=152.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
|++|+|+||||+|+||++++++|+++ |++|++++|+.+....+.. .++.++.+|++|.+++..+++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 35689999999999999999999998 9999999998766544322 358899999999999988876
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhH----HHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDA----LPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~----~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++ ..++..+++.+ .++|++||...+... +
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~---------~-- 141 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT---------P-- 141 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC---------C--
Confidence 5899999999764322 1234556778899884 55555666666 799999996432111 0
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCC--CC-CCC
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGID--GP-SEG 232 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~--~~-~~~ 232 (390)
....|+.+|...+.+.+.++ +..|++++++||+.+.++........- .. ...
T Consensus 142 ----------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 199 (273)
T PRK06182 142 ----------------------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGA 199 (273)
T ss_pred ----------------------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccc
Confidence 12269999999998876654 346899999999999887532100000 00 000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.......+...+... .....+...+|+|++++.++.... ....|+++.+
T Consensus 200 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~~~--~~~~~~~g~~ 248 (273)
T PRK06182 200 YAEQAQAVAASMRST---------YGSGRLSDPSVIADAISKAVTARR--PKTRYAVGFG 248 (273)
T ss_pred hHHHHHHHHHHHHHh---------hccccCCCHHHHHHHHHHHHhCCC--CCceeecCcc
Confidence 000000011111111 112346789999999999998742 3457887764
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=168.08 Aligned_cols=224 Identities=12% Similarity=0.112 Sum_probs=154.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+.+++||||||+|+||++++++|+++ |++|++..|+. ............ ....+.++.+|+++.+.+..+++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999998 99988876543 222111110000 12356788999999988877765
Q ss_pred --cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||......... .....+++|+.++.++++++.+.- .++|++||...|....
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 149 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY------------ 149 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC------------
Confidence 4799999999754322211 123567889999999988887542 5899999987664321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+.+.|+.+|...|.+++.++++. ++.+.+++|+.+.++.... .....
T Consensus 150 ---------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~----------~~~~~ 198 (252)
T PRK06077 150 ---------------------GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGES----------LFKVL 198 (252)
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHh----------hhhcc
Confidence 33479999999999999887765 6899999999987764320 00000
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.......... + .....+++++|+|+++..++..+. ..+++|++.++
T Consensus 199 ~~~~~~~~~~--~------~~~~~~~~~~dva~~~~~~~~~~~-~~g~~~~i~~g 244 (252)
T PRK06077 199 GMSEKEFAEK--F------TLMGKILDPEEVAEFVAAILKIES-ITGQVFVLDSG 244 (252)
T ss_pred cccHHHHHHh--c------CcCCCCCCHHHHHHHHHHHhCccc-cCCCeEEecCC
Confidence 0000000000 0 112368999999999999997653 46889999986
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-20 Score=166.17 Aligned_cols=219 Identities=13% Similarity=0.079 Sum_probs=152.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
|+||||||+|+||+++++.|.++ |++|++++|+.... ........ ....++.++.+|+++.+++.++++ .
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAA-GFDLAINDRPDDEELAATQQELR-ALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecCchhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999 99999999865321 11111000 012468899999999988877665 4
Q ss_pred ccEEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHHhC-----------CCcEEEeecccccccccCCCCC
Q 016370 90 ADLTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCSEN-----------NKRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~-----------~~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
+|+|||+||...... ........+++|+.++.++++++.+. ..++|++||...+....
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----- 155 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP----- 155 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC-----
Confidence 799999998754211 12344566889999999998877432 14699999976543221
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
+.+.|+.+|...|.+++.++.+ .+++++++||+.+.++...
T Consensus 156 ----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~-------- 199 (256)
T PRK12745 156 ----------------------------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA-------- 199 (256)
T ss_pred ----------------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc--------
Confidence 2236999999999999988754 5899999999999887532
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.....+......+ .. ....+.+++|+++++..++..... ..|++|++.++
T Consensus 200 -----~~~~~~~~~~~~~-~~-------~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg 250 (256)
T PRK12745 200 -----PVTAKYDALIAKG-LV-------PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG 250 (256)
T ss_pred -----ccchhHHhhhhhc-CC-------CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence 1111111111111 11 123477899999999988865321 35789999886
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=168.36 Aligned_cols=225 Identities=16% Similarity=0.150 Sum_probs=154.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++++++||||+|+||++|+++|+++ |++|+++.|+.+.......... ....+.++.+|++|.+++.+++.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999998 9999999998755433322111 13468899999999998887765
Q ss_pred -cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+++....... ..+....+..|+.++.++++++ ++.+ +++|++||...+....
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 148 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR----------- 148 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC-----------
Confidence 48999999997643222 1233445789999987766654 4555 7999999974432110
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
..+.|+.+|...+.+++.++.+. +++++++||+.++++.... ....
T Consensus 149 ----------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~---------~~~~ 197 (252)
T PRK06138 149 ----------------------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR---------IFAR 197 (252)
T ss_pred ----------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh---------hhcc
Confidence 22369999999999998887554 8999999999999885330 0000
Q ss_pred h-HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 236 V-LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
. ....+...... ......+++++|+|++++.++..+.. ..|..+.+.++
T Consensus 198 ~~~~~~~~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 198 HADPEALREALRA--------RHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred ccChHHHHHHHHh--------cCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 0 00011111111 01122378899999999999987542 24667777764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=169.58 Aligned_cols=227 Identities=17% Similarity=0.184 Sum_probs=154.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.++++++|||||+|+||++++++|+++ |++|++++|+++....+..... ..++.++.+|+.|++.+..++.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999998 9999999998755443322110 1156889999999998877765
Q ss_pred --cccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+++...+. ...++....++.|+.++.++++++. ..+ .+++++||.......
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~--------- 154 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY--------- 154 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC---------
Confidence 489999999976221 1123446778899999999888763 333 457777764321110
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...|.+++.++.+ .+++++++||+.++||...
T Consensus 155 ------------------------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~----------- 199 (264)
T PRK12829 155 ------------------------PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR----------- 199 (264)
T ss_pred ------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH-----------
Confidence 01236999999999999887654 3899999999999998643
Q ss_pred chhhHHHHHHHHhcCCCeEEe----cCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLV----DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.......... +.+.... ........+++++|+|+++..++... ....++.|++.++
T Consensus 200 --~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g 260 (264)
T PRK12829 200 --RVIEARAQQL--GIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGN 260 (264)
T ss_pred --HHhhhhhhcc--CCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence 1111100000 0000000 00011235899999999999888642 2246789999986
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.8e-20 Score=163.98 Aligned_cols=224 Identities=12% Similarity=0.082 Sum_probs=156.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+++++||||||+|+||.++++.|+++ |++|++++|++.....+...... ...+.++.+|+.|.+.+..++++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999 99999999987655443221111 24588999999999999887753
Q ss_pred --ccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+++...... ..+.....++.|+.++..+++.+. +.+ ++||++||...+....
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 149 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP---------- 149 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC----------
Confidence 799999998753221 123345678889998777776554 345 8899999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+++.++.+. +++++.++|+.+.++..... ..
T Consensus 150 -----------------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---------~~ 197 (251)
T PRK07231 150 -----------------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF---------MG 197 (251)
T ss_pred -----------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh---------hc
Confidence 23369999999998888876543 79999999999976643200 00
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............. .....+++++|+|++++.++.... ...|+.+.+.++
T Consensus 198 ~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 247 (251)
T PRK07231 198 EPTPENRAKFLAT---------IPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGG 247 (251)
T ss_pred ccChHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCC
Confidence 0000111111111 112347899999999999997643 234677788765
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=168.33 Aligned_cols=229 Identities=16% Similarity=0.150 Sum_probs=155.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC-CCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG-ADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+++||||||+|+||.+++++|.++ |++|++++|+............... ...+.++.+|+++.+++..++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999998 9999999998655443322111101 1358899999999988877665
Q ss_pred cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeeccc-ccccccCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCE-VYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~-vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||......... +....+++|+.++..+++++.+ .+ .++|++||.. .++..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------- 149 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------- 149 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------
Confidence 3799999998765432222 3345668899998877765543 33 5899998853 33211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|.+.+.+++.++. ..|+++.++||+.++++... .
T Consensus 150 -----------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~------------~ 194 (259)
T PRK12384 150 -----------------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF------------Q 194 (259)
T ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh------------h
Confidence 123699999999888887764 46899999999998876432 1
Q ss_pred hhHHHHHHHHhc--CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 235 RVLACFSNNLLR--RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.+++.+...... +.......++.....+++++|+++++..++.+... ..|+.|++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g 255 (259)
T PRK12384 195 SLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG 255 (259)
T ss_pred hhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence 222222211100 00001112233456789999999999988875432 35789999986
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-20 Score=162.94 Aligned_cols=213 Identities=14% Similarity=0.127 Sum_probs=155.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|++.+........ ...+++++.+|+.|.+++..+++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLSQTLPGV---PADALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHHHHHHHH---hhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999 999999999775533221111 02357788899999988887776
Q ss_pred -cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+++....... .+...+.+..|+.++.++++++. +.+ +++|++||...++...
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 149 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP----------- 149 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC-----------
Confidence 48999999987532211 12234557789999999888774 344 8999999987765421
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+++.+++. .++++.++||+.++++....
T Consensus 150 ----------------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~------------- 194 (239)
T PRK12828 150 ----------------------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA------------- 194 (239)
T ss_pred ----------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh-------------
Confidence 2236999999998888776543 48999999999999874220
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCc
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNE 295 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~ 295 (390)
..+ ......+++++|+|+++..++.... ...++.+++.++ +.
T Consensus 195 -----------~~~------~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~-~~ 237 (239)
T PRK12828 195 -----------DMP------DADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGG-VA 237 (239)
T ss_pred -----------cCC------chhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCC-Ee
Confidence 000 0112237999999999999998643 235788888886 44
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=162.15 Aligned_cols=227 Identities=19% Similarity=0.196 Sum_probs=156.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++++||||||+|+||++++++|+++ |++|++++|+.+....+...... ...++.++.+|+.|.++++++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999998 99999999987654433221110 12468899999999998888775
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+++........ ......+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~----------- 147 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS----------- 147 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----------
Confidence 389999999875322211 1224568899999998877764 445 7899999987765431
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|.+.+.+.+.++.+. +++++++||+.++++....... +....
T Consensus 148 ----------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~---~~~~~-- 200 (250)
T TIGR03206 148 ----------------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICG---GAENP-- 200 (250)
T ss_pred ----------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhh---ccCCh--
Confidence 12369999999998888876654 8999999999999885321000 00000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..+...+....+. ..+...+|+|+++..++.... ...++++++.++
T Consensus 201 --~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 247 (250)
T TIGR03206 201 --EKLREAFTRAIPL---------GRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG 247 (250)
T ss_pred --HHHHHHHHhcCCc---------cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence 0111222222211 124567999999999887643 235789999875
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=160.76 Aligned_cols=208 Identities=14% Similarity=0.137 Sum_probs=146.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~d~ 92 (390)
.||++|||||+|+||+++++.|+++ ++|++++|+......+... ...++++.+|+.|.+.+.+++. ++|+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 74 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLDELAAE-----LPGATPFPVDLTDPEAIAAAVEQLGRLDV 74 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHHHHHHH-----hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence 3679999999999999999999987 8999999987654433221 1367899999999999998887 4999
Q ss_pred EEEeccccCCcccc----CChhHHHHHhhhh----HHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 93 TINLAAICTPADYN----TRPLDTIYSNFID----ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 93 Vih~a~~~~~~~~~----~~~~~~~~~nv~~----~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
|||+++........ ++....+..|+.+ +.++++++++.+.++|++||...++...
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~----------------- 137 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP----------------- 137 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC-----------------
Confidence 99999976432111 1223456778887 5555555665568999999976654321
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-C-ccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-G-LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (390)
+...|+.+|...|.+++.++... + +++..++|+.+.++... .+..
T Consensus 138 ----------------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-----------------~~~~ 184 (227)
T PRK08219 138 ----------------GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR-----------------GLVA 184 (227)
T ss_pred ----------------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh-----------------hhhh
Confidence 22369999999998888775432 4 78888888766554221 0110
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
. .+. ......+++++|+|++++.+++.+. .+.++++.-
T Consensus 185 ~--~~~-------~~~~~~~~~~~dva~~~~~~l~~~~--~~~~~~~~~ 222 (227)
T PRK08219 185 Q--EGG-------EYDPERYLRPETVAKAVRFAVDAPP--DAHITEVVV 222 (227)
T ss_pred h--hcc-------ccCCCCCCCHHHHHHHHHHHHcCCC--CCccceEEE
Confidence 0 011 0112458999999999999998864 567887764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.7e-20 Score=165.16 Aligned_cols=232 Identities=13% Similarity=0.107 Sum_probs=156.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+|+||||||+|+||++++++|+++ |++|++++|++.....+...... ...++.++.+|++|.+.+..++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 99999999987654433221110 12467899999999998877664
Q ss_pred -cccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+|+..... ....+....++.|+.++..+++++... +.++|++||...+....
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 149 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP----------- 149 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC-----------
Confidence 379999999875321 112345567889999999999988642 25899999975432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+++.++.+ .+++++++||+.+++|...............
T Consensus 150 ----------------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~-- 205 (258)
T PRK07890 150 ----------------------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGV-- 205 (258)
T ss_pred ----------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCC--
Confidence 2336999999999999988754 4899999999999998532000000000000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
-...+....... .....+.+++|+|+++..++.... ...|+.+.+.++
T Consensus 206 ~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg 254 (258)
T PRK07890 206 TVEQIYAETAAN---------SDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG 254 (258)
T ss_pred CHHHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence 001111111111 112246789999999999887532 245677777765
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=164.32 Aligned_cols=248 Identities=15% Similarity=0.163 Sum_probs=165.4
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh
Q 016370 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81 (390)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~ 81 (390)
+.++....++...+.+|++|||||+|+||++++++|+++ |++|++++|.......+..... ...++.++.+|++|.+
T Consensus 3 ~~~~~~~~~~~~~l~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~ 79 (280)
T PLN02253 3 TASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVED 79 (280)
T ss_pred cchhhhccccccccCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHH
Confidence 344455566666778899999999999999999999998 9999999987654433322111 1246889999999999
Q ss_pred HHHHhhc-------cccEEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccc-
Q 016370 82 RLEGLIK-------MADLTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEV- 142 (390)
Q Consensus 82 ~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~v- 142 (390)
++.+++. ++|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...
T Consensus 80 ~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 159 (280)
T PLN02253 80 DVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA 159 (280)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc
Confidence 9888776 4899999999764211 1234566788999999998887753 23 57888887542
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCC
Q 016370 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPR 219 (390)
Q Consensus 143 y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~ 219 (390)
++.. ....|+.+|...|.+.+.++.+. ++++.+++|+.+..+.
T Consensus 160 ~~~~----------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 160 IGGL----------------------------------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred ccCC----------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 2211 11269999999999999887654 7999999999997764
Q ss_pred CCCCCCCCCCCCC-chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 220 MDFIPGIDGPSEG-VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
.... .|... ....+..+......+.+. ....++++|+|+++..++.... ...++.+++.++ ...+
T Consensus 206 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG-~~~~ 272 (280)
T PLN02253 206 ALAH----LPEDERTEDALAGFRAFAGKNANL--------KGVELTVDDVANAVLFLASDEARYISGLNLMIDGG-FTCT 272 (280)
T ss_pred cccc----cccccchhhhhhhhHHHhhcCCCC--------cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCc-hhhc
Confidence 2100 00000 001111111111111111 1124679999999999987532 235788999886 4444
Q ss_pred HH
Q 016370 298 VR 299 (390)
Q Consensus 298 ~~ 299 (390)
..
T Consensus 273 ~~ 274 (280)
T PLN02253 273 NH 274 (280)
T ss_pred cc
Confidence 33
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=161.64 Aligned_cols=218 Identities=15% Similarity=0.157 Sum_probs=157.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---cc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---AD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~d 91 (390)
+++++++||||+|+||+++++.|.++ |++|++++|+.+....+... .+..++.+|+++.+.+..++.. +|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~d 79 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGE------TGCEPLRLDVGDDAAIRAALAAAGAFD 79 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH------hCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence 56789999999999999999999998 99999999987655443321 2467889999999888888764 89
Q ss_pred EEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC----C--CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN----N--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+|||+|+....... ..+....+..|+.++.++++++.+. + .++|++||...+....
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 145 (245)
T PRK07060 80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-------------- 145 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC--------------
Confidence 99999997643211 1234456679999999998877542 2 6899999976554321
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
+...|+.+|...|.+++.++.+ .+++++.+||+.++++..... ... .
T Consensus 146 -------------------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~---------~~~--~ 195 (245)
T PRK07060 146 -------------------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA---------WSD--P 195 (245)
T ss_pred -------------------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh---------ccC--H
Confidence 2236999999999999888754 379999999999998854310 000 0
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+... .....+++++|+|+++..++..+. ...|+.+++.++
T Consensus 196 ~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK07060 196 QKSGPMLAA---------IPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG 241 (245)
T ss_pred HHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence 001111111 112348899999999999998653 235788888875
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=161.51 Aligned_cols=227 Identities=15% Similarity=0.138 Sum_probs=158.1
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
-.+++|+||||||+|+||.+++++|+++ |++|++++|+.+........... ...++.++.+|++|.+++..++.
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999998 99999999987554333211110 12467789999999998866664
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC-----C-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~-----~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+|+........ ......++.|+.++.++++++... + .++|++||...+...... .
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-----~ 160 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-----V 160 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-----c
Confidence 389999999975322222 223456779999999999977554 4 689999997554332110 0
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...|.+++.+++++ ++++.+++|+.+-.+...
T Consensus 161 ------------------------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~----------- 205 (259)
T PRK08213 161 ------------------------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR----------- 205 (259)
T ss_pred ------------------------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh-----------
Confidence 122479999999999999887653 789999999887665322
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..+..+......+.++... ...+|+++++..++.... ...|+.+++.++
T Consensus 206 --~~~~~~~~~~~~~~~~~~~---------~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 206 --GTLERLGEDLLAHTPLGRL---------GDDEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred --hhhHHHHHHHHhcCCCCCC---------cCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 2333344444444443332 347999999988886543 235778887774
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=161.72 Aligned_cols=223 Identities=14% Similarity=0.070 Sum_probs=153.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
|.++++|||||+|+||++++++|+++ |++|+++ .|+......+..... .....+.++.+|++|++++..++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAAEETAEEIE-ALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 9998774 666544332221110 0134688899999999988887763
Q ss_pred ---ccEEEEeccccCCccccCC----hhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYNTR----PLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~~~----~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+|+.......... ....+.+|+.++.++++++.+ .+ ++||++||...+...
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 148 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL----------- 148 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------
Confidence 7999999987643222222 223567899999988887764 33 699999996543221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|.+.|.+++.++.+ .++++++++|+.+..+..... .
T Consensus 149 ----------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~----------~ 196 (250)
T PRK08063 149 ----------------------ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF----------P 196 (250)
T ss_pred ----------------------CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc----------c
Confidence 02347999999999999887654 589999999999987653210 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ..+........+ ...+++.+|+|+++..++..+. ...++.+++.++
T Consensus 197 ~~-~~~~~~~~~~~~---------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg 245 (250)
T PRK08063 197 NR-EELLEDARAKTP---------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGG 245 (250)
T ss_pred Cc-hHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 00 111111111111 1236889999999999987643 235788998886
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=160.50 Aligned_cols=219 Identities=15% Similarity=0.199 Sum_probs=153.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh----hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|... ....+.... ......+.++.+|+.|.+.+..++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD-GADVIVLDIHPMRGRAEADAVAAGI-EAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEcCcccccHHHHHHHHHHH-HhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 45789999999999999999999998 999999876432 111111110 0013468899999999998887774
Q ss_pred -----cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH-----hCC-CcEEEeecccccccccCCCCCC
Q 016370 89 -----MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS-----ENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~-----~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||....... ..+....+..|+.++.++++++. +.+ .++|++||...+....
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------ 155 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR------ 155 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC------
Confidence 48999999998753211 22344567899999999999887 344 7899999976553321
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
+...|+.+|...+.+++.++.+ .+++++++||+.+.++....
T Consensus 156 ---------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~-------- 200 (249)
T PRK12827 156 ---------------------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN-------- 200 (249)
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc--------
Confidence 2236999999999888887654 38999999999999985430
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... .......++ ..+...+|+|+++..++.... ...++.+++.++
T Consensus 201 ----~~~~---~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 201 ----AAPT---EHLLNPVPV---------QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred ----cchH---HHHHhhCCC---------cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence 0110 111222211 124578999999999886532 235678888875
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=166.31 Aligned_cols=223 Identities=12% Similarity=0.090 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||.+++++|+++ |++|++++|+... ...+.... .....++.++.+|+.+.+.+.++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~-G~~V~l~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKE-GADIAIVYLDEHEDANETKQRV-EKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHH-HhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 566789999999999999999999999 9999999887532 22211111 0112467889999999998887775
Q ss_pred ---cccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+|+....... .++....+++|+.++.++++++... +.++|++||...|....
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~---------- 190 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE---------- 190 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC----------
Confidence 37999999997532111 1233567889999999999988653 26899999987765431
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+++.++.+. |++++.++|+.++.+.... .
T Consensus 191 -----------------------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~--------~--- 236 (290)
T PRK06701 191 -----------------------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS--------D--- 236 (290)
T ss_pred -----------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc--------c---
Confidence 11269999999999999887664 8999999999998874320 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........... ......+.+++|+|++++.++.... ...+..+++.++
T Consensus 237 -~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg 285 (290)
T PRK06701 237 -FDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGG 285 (290)
T ss_pred -cCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence 00111111111 1123357889999999999988642 245788888875
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=164.84 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=159.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
++.+|+||||||+|+||+++++.|.++ |++|++..++.+. ......... ....++.++.+|++|.+++.+++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFARE-GADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 466789999999999999999999999 9999887765421 111111100 013467889999999988877765
Q ss_pred ----cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ..++....+++|+.++..+++++... +.++|++||...|....
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~--------- 200 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP--------- 200 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC---------
Confidence 4899999999753211 22345678889999999999988753 26999999987765431
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|.+.+.+++.++.+ .|+++.+++|+.+.+|.... ..
T Consensus 201 ------------------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~--------~~- 247 (300)
T PRK06128 201 ------------------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS--------GG- 247 (300)
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc--------CC-
Confidence 1226999999999999888765 48999999999999985320 00
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.............+ ...+...+|+|.+++.++.... ...+++|++.++ ..+
T Consensus 248 --~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg-~~~ 299 (300)
T PRK06128 248 --QPPEKIPDFGSETP---------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG-LLL 299 (300)
T ss_pred --CCHHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCC-EeC
Confidence 00111122222222 2235679999999999887533 235789999986 443
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-19 Score=160.78 Aligned_cols=207 Identities=15% Similarity=0.174 Sum_probs=147.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+++||||||+|+||+++++.|+++ |++|++++|++.....+...... ...++.++.+|+.|.+.+..+++ +
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASLAQELAD-HGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999998 89999999987554433211111 13468889999999998888776 4
Q ss_pred ccEEEEeccccCCccccC-----ChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYNT-----RPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~-----~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+|+......... ...+.++.|+.++.++++.+.. .+.++|++||...|....
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 145 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP------------- 145 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-------------
Confidence 899999998765332222 2345688999999999988743 237899999977654321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+...|+.+|...|.+.+.+.. ..++++++++|+.+..+... ...
T Consensus 146 --------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~-------------~~~ 192 (263)
T PRK06181 146 --------------------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRK-------------RAL 192 (263)
T ss_pred --------------------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcch-------------hhc
Confidence 224799999999988877653 34899999999998776422 000
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
. ..+.+... .+.+...+++++|+|+++..+++..
T Consensus 193 ----~--~~~~~~~~--~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 193 ----D--GDGKPLGK--SPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred ----c--cccccccc--ccccccCCCCHHHHHHHHHHHhhCC
Confidence 0 01111111 1122347899999999999999864
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-19 Score=158.00 Aligned_cols=220 Identities=15% Similarity=0.158 Sum_probs=151.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||++++++|+++ |++|+++.|+... ......... .....+.++.+|+.+.+.+.++++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSEAGAEALVAEIG-ALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999998 9999888876542 111111100 013468889999999998887766
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecc-cccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTC-EVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~-~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+|+........ ......+..|+.++.++++++... + +++|++||. ++|+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~---------- 150 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP---------- 150 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC----------
Confidence 479999999976432211 234456778999999988877643 3 679999985 333321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+++.+++. .+++++++||+.+.++...
T Consensus 151 ------------------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~------------ 194 (248)
T PRK05557 151 ------------------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD------------ 194 (248)
T ss_pred ------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc------------
Confidence 1236999999999888776543 4799999999888655322
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+........+ ...+.+++|+|+++..++.... ...++.|++.++
T Consensus 195 -~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~ 244 (248)
T PRK05557 195 -ALPEDVKEAILAQIP---------LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGG 244 (248)
T ss_pred -ccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence 111222222222221 1235689999999998886522 235789999875
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=161.15 Aligned_cols=223 Identities=13% Similarity=0.136 Sum_probs=157.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+|+||||+|.||+++++.|.++ |++|++++|+++........... ...++.++.+|+.|.+.+.+++.
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999 99999999887654433221110 12468899999999998887774
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||++|........ ......++.|+.++.++++++... + .++|++||...+....
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 151 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP---------- 151 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC----------
Confidence 489999999976432211 233455778999999998877542 2 5899999965443221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...|.+++.++.+ .++++++++|+.+..+.... ..
T Consensus 152 -----------------------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~----------~~ 198 (250)
T PRK12939 152 -----------------------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY----------VP 198 (250)
T ss_pred -----------------------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc----------cC
Confidence 1236999999999999887644 47999999999887765321 00
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. ..+....... .....+++++|+|+++..++.... ...|+.+++.++
T Consensus 199 ~--~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg 246 (250)
T PRK12939 199 A--DERHAYYLKG---------RALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGG 246 (250)
T ss_pred C--hHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 0 0112222222 123347889999999999998643 246788888885
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-19 Score=157.46 Aligned_cols=223 Identities=14% Similarity=0.086 Sum_probs=153.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+++|+||||+|+||++++++|+++ |++|++++|+.+......+. ....+.++.+|+.|.+++..++.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAE----LGESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 55789999999999999999999999 99999999986554433221 12467789999999887766554
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh---CCCcEEEeec-ccccccccCCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE---NNKRLIHFST-CEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~v~~Ss-~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||...... ..++....+++|+.++.++++++.. .+.++|++|| ...|+..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------- 145 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------- 145 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC-------------
Confidence 4899999999764322 1234556788999999999999874 2356777776 4444321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
..+.|+.+|...|.+++.++.+ .+++++++||+.+++|..... ......
T Consensus 146 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~-------~~~~~~ 197 (249)
T PRK06500 146 ---------------------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKL-------GLPEAT 197 (249)
T ss_pred ---------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhh-------ccCccc
Confidence 2237999999999999877654 389999999999998843200 000011
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...+...+....++.. +...+|+|+++..++.... ...+..+.+.++
T Consensus 198 ~~~~~~~~~~~~~~~~---------~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 198 LDAVAAQIQALVPLGR---------FGTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred hHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 2223333333333221 3468999999999887532 234556666554
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-19 Score=158.98 Aligned_cols=219 Identities=14% Similarity=0.114 Sum_probs=149.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+++|||||+|+||.+++++|+++ |++|++..++. ........... .....+.++.+|++|.+.+.+++. .
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAER-GYAVCLNYLRNRDAAEAVVQAIR-RQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCeEEEecCCCHHHHHHHHHHHH-hCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 57999999999999999999998 89988776443 22222111100 012457789999999998888776 3
Q ss_pred ccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHHHHHhCC--------CcEEEeecccc-cccccCCCCCCCC
Q 016370 90 ADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVKYCSENN--------KRLIHFSTCEV-YGKTIGSFLPKDS 155 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~--------~~~v~~Ss~~v-y~~~~~~~~~e~~ 155 (390)
+|+|||+|+....... .++....+++|+.++.++++++.+.- .++|++||... ++...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 152 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------- 152 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence 7999999997643211 12334678899999998887765421 36999999643 33210
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...|.+++.++.+. +++++++||+.+++|.... .
T Consensus 153 -------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~--------~- 198 (248)
T PRK06123 153 -------------------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHAS--------G- 198 (248)
T ss_pred -------------------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhc--------c-
Confidence 01259999999999998886654 8999999999999985331 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.............|+.. +.+++|+++++..++.... ...++.|++.++
T Consensus 199 ---~~~~~~~~~~~~~p~~~---------~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 199 ---GEPGRVDRVKAGIPMGR---------GGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred ---CCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 01112222333333221 2368999999999887542 235789999874
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=156.84 Aligned_cols=220 Identities=14% Similarity=0.132 Sum_probs=153.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+|+||||+|+||+++++.|+++ |++|++++|+......+... ....+.++.+|+++.+++..++.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKA----LGENAWFIAMDVADEAQVAAGVAEVLGQ 81 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHH----cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999 99999998876544332211 12467899999999988766554
Q ss_pred --cccEEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+||...... ..++....++.|+.++.++++++.. .+.++|++||...+....
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~--------- 152 (255)
T PRK05717 82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP--------- 152 (255)
T ss_pred hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC---------
Confidence 2799999999764321 1223456788999999999999853 236899999865432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
..+.|+.+|...+.+.+.++++. ++++.+++|+.+.++.... .
T Consensus 153 ------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~---------~-- 197 (255)
T PRK05717 153 ------------------------DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQ---------R-- 197 (255)
T ss_pred ------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccc---------c--
Confidence 12369999999999999887765 4899999999998875320 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....+........+ ...+.+++|+|.++..++.... ...++.+.+.++
T Consensus 198 -~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 246 (255)
T PRK05717 198 -RAEPLSEADHAQHP---------AGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG 246 (255)
T ss_pred -cchHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence 00011110001111 1136689999999998886532 235678888764
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-19 Score=158.41 Aligned_cols=228 Identities=17% Similarity=0.209 Sum_probs=149.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
+++|+||||||+|+||+++++.|.++ |++|+++.|+++........... .....+.++.+|+.|++++.+++.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999998 99999999987654333221100 0123566789999999999888764
Q ss_pred ---ccEEEEeccccCCc-------cccCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCC
Q 016370 90 ---ADLTINLAAICTPA-------DYNTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~-------~~~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
+|+|||+|+..... .........+++|+.++..+++ ++++.+ .++|++||...+...... ..+.
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~~~ 159 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFE-IYEG 159 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccch-hccc
Confidence 79999999754210 0112234556778877765554 444455 799999996544321111 0111
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+. .....|+.+|...+.+.+.++.+ .++++++++|+.++++...
T Consensus 160 ~~~----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~---------- 207 (256)
T PRK09186 160 TSM----------------------TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE---------- 207 (256)
T ss_pred ccc----------------------CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH----------
Confidence 111 01226999999999998766654 5799999999988765311
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.+ ........ ....+++++|+|+++..++..... ..++.+.+.++
T Consensus 208 ---~~----~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 208 ---AF----LNAYKKCC---------NGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred ---HH----HHHHHhcC---------CccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 11 11111111 112478999999999999976432 34677777775
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.1e-19 Score=157.53 Aligned_cols=222 Identities=14% Similarity=0.112 Sum_probs=154.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+.+|++|||||+|+||++++++|+++ |++|++++|+. ... ....+.++.+|+.+.+.+.+++.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~--~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF--LTQ--------EDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch--hhh--------cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 99999999976 110 134688899999999999888764
Q ss_pred --ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+++...... ...+....+++|+.++..+++++.. .+ .++|++||.......
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------ 142 (252)
T PRK08220 75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR------------ 142 (252)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC------------
Confidence 799999999764322 1234556788999999999887743 34 689999996542211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+.+.|+.+|...+.+++.++.+ .++++++++|+.+++|....... .+ .....
T Consensus 143 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~--~~-~~~~~ 198 (252)
T PRK08220 143 ---------------------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWV--DE-DGEQQ 198 (252)
T ss_pred ---------------------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhcc--ch-hhhhh
Confidence 02347999999999999888765 68999999999999985321000 00 00000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.+.........+ .....+++++|+|++++.++... ....++.+.+.++
T Consensus 199 ~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg 247 (252)
T PRK08220 199 VIAGFPEQFKLG---------IPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGG 247 (252)
T ss_pred hhhhHHHHHhhc---------CCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence 000011111111 12345889999999999988653 2245667777664
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-18 Score=156.19 Aligned_cols=221 Identities=11% Similarity=0.111 Sum_probs=150.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
.+|++|||||+|+||+++++.|+++ |++|+++.++.. ....+..... ....++.++.+|++|.+++.+++..
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH-GFDVAVHYNRSRDEAEALAAEIR-ALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4579999999999999999999998 899988776542 2222211100 0134688899999999988877753
Q ss_pred --ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||...... ........+++|+.++..+++++... . .++|++||...+....
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----------- 154 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----------- 154 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC-----------
Confidence 799999999754321 12234567889999999998877653 2 5788887754332210
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...|.+.+.++++. ++++++++|+.+...... .
T Consensus 155 ----------------------~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~--------------~ 198 (258)
T PRK09134 155 ----------------------DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ--------------S 198 (258)
T ss_pred ----------------------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc--------------C
Confidence 12369999999999999887654 489999999887654211 0
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCccc
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s 297 (390)
...+. ......+. + ...+++|+|++++.+++.+. ..++.|++.++ ..++
T Consensus 199 ~~~~~-~~~~~~~~---~------~~~~~~d~a~~~~~~~~~~~-~~g~~~~i~gg-~~~~ 247 (258)
T PRK09134 199 PEDFA-RQHAATPL---G------RGSTPEEIAAAVRYLLDAPS-VTGQMIAVDGG-QHLA 247 (258)
T ss_pred hHHHH-HHHhcCCC---C------CCcCHHHHHHHHHHHhcCCC-cCCCEEEECCC-eecc
Confidence 11111 11111111 1 13669999999999998754 56789999886 4443
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-18 Score=154.49 Aligned_cols=162 Identities=15% Similarity=0.161 Sum_probs=127.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------ 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------ 89 (390)
++++|+||||+|+||++++++|.++ |++|++++|++..... ..+++++.+|++|.+++.+++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 3568999999999999999999999 9999999998654332 24688999999999999888864
Q ss_pred -ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 -ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 140 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP------------ 140 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC------------
Confidence 7999999998643222 1234567889999988888764 5556 8999999975443211
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCC
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~ 220 (390)
....|+.+|...|.+.+.+..+ .|+++++++|+.+.++..
T Consensus 141 ---------------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 141 ---------------------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred ---------------------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 2237999999999988877543 589999999999988754
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=177.37 Aligned_cols=231 Identities=13% Similarity=0.140 Sum_probs=161.9
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
..+.+++||||||+|+||.++++.|.++ |++|++++|+.+........... ..++.++.+|++|.+++.+++.
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~r~~~~~~~~~~~l~~--~~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLADLDEEAAEAAAAELGG--PDRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHhc--cCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3467789999999999999999999998 99999999987655433221111 1378899999999998887775
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||....... .......+++|+.++.++++++. +.+ .+||++||...+....
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~-------- 566 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP-------- 566 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC--------
Confidence 48999999997643221 22344567899999999977664 333 6899999975543211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceec-CCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWI-GPRMDFIPGIDGPSE 231 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~-G~~~~~~~~~~~~~~ 231 (390)
..+.|+.+|...+.+++.++.+. ++++++++|+.+| ++... .
T Consensus 567 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~---------~ 612 (681)
T PRK08324 567 -------------------------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW---------T 612 (681)
T ss_pred -------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc---------c
Confidence 22379999999999999887554 6999999999998 55321 0
Q ss_pred CchhhHHHHHHHHhcCCCeE----EecCCcceeeeeeHHHHHHHHHHHHhC-CCCCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLK----LVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~D~a~~~~~~l~~-~~~~~~~~~nv~~~ 292 (390)
..+. .......+.+.. ..+++...+.+++++|+|++++.++.. .....|++|++.++
T Consensus 613 --~~~~--~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG 674 (681)
T PRK08324 613 --GEWI--EARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG 674 (681)
T ss_pred --chhh--hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 0010 001111111111 223445567899999999999998842 22246789999986
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-18 Score=153.71 Aligned_cols=218 Identities=11% Similarity=0.098 Sum_probs=153.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|+||||||+|.||+++++.|.++ |++|++++|+..... ...+.++.+|+.|.+.+..++.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEA-GARVVTTARSRPDDL----------PEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHC-CCEEEEEeCChhhhc----------CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 577899999999999999999999998 999999999764321 2467889999999988776554
Q ss_pred --cccEEEEeccccCCc------cccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA------DYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||..... ...++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------- 146 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP-------- 146 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC--------
Confidence 479999999964211 122345567789999987775544 4445 6899999975432210
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++|+.+.+|...
T Consensus 147 ------------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~----------- 191 (260)
T PRK06523 147 ------------------------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV----------- 191 (260)
T ss_pred ------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH-----------
Confidence 12347999999999998888654 4799999999999887532
Q ss_pred chhhHH-----------HHHHHH---hcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCccc
Q 016370 233 VPRVLA-----------CFSNNL---LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 233 ~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s 297 (390)
.+.. .....+ ..+.| ...+...+|+|+++..++... ....|+.+.+.++ ...|
T Consensus 192 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg-~~~~ 259 (260)
T PRK06523 192 --ALAERLAEAAGTDYEGAKQIIMDSLGGIP---------LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG-TVPT 259 (260)
T ss_pred --HHHHHHHhhcCCCHHHHHHHHHHHhccCc---------cCCCCCHHHHHHHHHHHhCcccccccCceEEecCC-ccCC
Confidence 0111 001111 11111 112456899999999998753 2346788999886 4443
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=153.69 Aligned_cols=202 Identities=14% Similarity=0.123 Sum_probs=145.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+++++||||+|+||.+++++|+++ |++|++++|++........... ....++.++.+|+.+.+.+.++++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAVAEEVE-AYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHH-HhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 355689999999999999999999998 9999999998755433221111 113468889999999999888876
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+++....... ..+....+++|+.++.++++++. +.+ +++|++||...+....
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---------- 151 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA---------- 151 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC----------
Confidence 48999999987643221 12334567899999988888775 334 7899999865443321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|.+.+.+++.++.+ .+++++++||+.+..+...
T Consensus 152 -----------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~------------- 195 (239)
T PRK07666 152 -----------------------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAV------------- 195 (239)
T ss_pred -----------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchh-------------
Confidence 2236999999999888776543 5899999999999876422
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.. ....+ . ...++..+|+|+.+..++..+
T Consensus 196 ~~------~~~~~-------~---~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 196 DL------GLTDG-------N---PDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred hc------ccccc-------C---CCCCCCHHHHHHHHHHHHhCC
Confidence 00 00001 1 123578999999999999875
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=155.21 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=154.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
++++++|||||+|+||..+++.|+++ |++|++++|+............. ....+.++.+|+++.+.+.++++.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEAVAECGA-LGTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999998 99999999987554433221110 134678899999998887766653
Q ss_pred --ccEEEEeccccCCcc-------------ccCChhHHHHHhhhhHHHHHHHHH----hC-C-CcEEEeecccccccccC
Q 016370 90 --ADLTINLAAICTPAD-------------YNTRPLDTIYSNFIDALPVVKYCS----EN-N-KRLIHFSTCEVYGKTIG 148 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~----~~-~-~~~v~~Ss~~vy~~~~~ 148 (390)
+|+|||+||...... ...+....++.|+.++..++..+. +. . .++|++||...|+..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-- 158 (253)
T PRK08217 81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-- 158 (253)
T ss_pred CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC--
Confidence 799999999653211 112334566789998876665332 22 2 579999997766432
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPG 225 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~ 225 (390)
+...|+.+|.+.+.+++.++.+ .+++++.++|+.+.++...
T Consensus 159 --------------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~---- 202 (253)
T PRK08217 159 --------------------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA---- 202 (253)
T ss_pred --------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc----
Confidence 2236999999999998888654 5899999999999887543
Q ss_pred CCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
...+..........+ ...+.+++|+|+++..++... ...+++|++.++
T Consensus 203 ---------~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~~~~-~~~g~~~~~~gg 250 (253)
T PRK08217 203 ---------AMKPEALERLEKMIP---------VGRLGEPEEIAHTVRFIIEND-YVTGRVLEIDGG 250 (253)
T ss_pred ---------ccCHHHHHHHHhcCC---------cCCCcCHHHHHHHHHHHHcCC-CcCCcEEEeCCC
Confidence 111222233332222 123567999999999999763 357889999985
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-18 Score=151.09 Aligned_cols=212 Identities=16% Similarity=0.160 Sum_probs=148.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
|.+|+||||||+|+||++++++|.++ |++|++++|+.... ...+++.+|+.|.+++..++.
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~-G~~v~~~~r~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANL-GHQVIGIARSAIDD------------FPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCcccc------------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999 99999999976531 122578899999998887776
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|+|||+++....... ..+....++.|+.++.++.+++ ++.+ .++|++||...|+..
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 134 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------------- 134 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-------------
Confidence 48999999998654322 2234456778999887776554 4455 799999998766432
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
..+.|+.+|...|.+.+.++.+ .+++++++||+.+..+..... ...
T Consensus 135 ---------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~----------~~~ 183 (234)
T PRK07577 135 ---------------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT----------RPV 183 (234)
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc----------ccc
Confidence 1236999999999888876543 489999999999987643200 000
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............+. ..+...+|+|+++..++..+. ...++.+++.++
T Consensus 184 ~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~ 231 (234)
T PRK07577 184 GSEEEKRVLASIPM---------RRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG 231 (234)
T ss_pred chhHHHHHhhcCCC---------CCCcCHHHHHHHHHHHhCcccCCccceEEEecCC
Confidence 01111112222111 113468999999999987642 235788888765
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=155.77 Aligned_cols=195 Identities=12% Similarity=0.119 Sum_probs=142.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------- 89 (390)
+|+|+||||+|+||++++++|.++ |++|++++|+.+....+...... ..++.++.+|++|.+++.++++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFAARLPK--AARVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccc--CCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999998 99999999987655443322111 11688999999999988877653
Q ss_pred ccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||....... .++....+++|+.++..+++ ++++.+ .++|++||...+....
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~------------ 146 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLP------------ 146 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC------------
Confidence 7999999997643211 13455678899999988776 455555 7899999865432210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...+.+.+.+. +..|++++++||+.+.++....
T Consensus 147 ---------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------------- 191 (257)
T PRK07024 147 ---------------------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------------- 191 (257)
T ss_pred ---------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc--------------
Confidence 12369999999999987775 4458999999999998764220
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
...+. ..++..+|+|+.++.++.+.
T Consensus 192 ---------~~~~~---------~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 192 ---------NPYPM---------PFLMDADRFAARAARAIARG 216 (257)
T ss_pred ---------CCCCC---------CCccCHHHHHHHHHHHHhCC
Confidence 00000 01356999999999999874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=153.58 Aligned_cols=222 Identities=17% Similarity=0.150 Sum_probs=151.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++++||||||+|+||+++++.|.++ |++|+++.|+... ...+.+.. .....++.++.+|+.+.+++.++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAGSAAAADELVAEI-EAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 9999888775432 11111110 0123468899999999998888876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|+|||+||...... ...+....+++|+.++.++++++.+.- .++|++||...+...
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------- 147 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL------------- 147 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-------------
Confidence 4899999999764221 122344567899999999988776532 589999986543221
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.+.+.|+.+|...+.+++.++.+ .++++++++|+.+-.+.... ..
T Consensus 148 --------------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~------------~~ 195 (245)
T PRK12937 148 --------------------PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN------------GK 195 (245)
T ss_pred --------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc------------cC
Confidence 12347999999999999887654 37899999998876653210 00
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.......+....+.. -+.+++|+|+++..++..... ..++.+++.++
T Consensus 196 ~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 196 SAEQIDQLAGLAPLE---------RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred CHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence 111222333332221 244689999999998876432 35788888764
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=154.93 Aligned_cols=221 Identities=13% Similarity=0.121 Sum_probs=146.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------ 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------ 89 (390)
|++||||||+|+||++++++|+++ |++|+++ .|+++........... ....+.++.+|+.|.+.+..++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE-GYTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999998 9999875 4554433222111100 123578899999999988887764
Q ss_pred -ccEEEEeccccCCcccc-----CChhHHHHHhhhhHHHHHHHHHhC--------CCcEEEeecccccccccCCCCCCCC
Q 016370 90 -ADLTINLAAICTPADYN-----TRPLDTIYSNFIDALPVVKYCSEN--------NKRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~-----~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|+|||+++........ ++....+++|+.++..+++++... +.+||++||...+....+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~------- 151 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG------- 151 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC-------
Confidence 68999999975321111 123467889999998777655332 146999999754322100
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...|.+++.++.+ .+++++++||+.+|+|.... ..
T Consensus 152 -------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~--------~~ 198 (247)
T PRK09730 152 -------------------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHAS--------GG 198 (247)
T ss_pred -------------------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccccc--------CC
Confidence 1125999999999888877644 48999999999999986431 01
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+ ..........++.. ...++|+|+++..++.... ...+..|++.++
T Consensus 199 ~~----~~~~~~~~~~~~~~---------~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 199 EP----GRVDRVKSNIPMQR---------GGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred CH----HHHHHHHhcCCCCC---------CcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 11 11222222222211 2368999999999887532 134667777664
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=152.84 Aligned_cols=214 Identities=14% Similarity=0.082 Sum_probs=152.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+++|+||||+|+||++++++|+++ |++|++++|++.....+...... ..++.++.+|+.+.+++..+++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEAAAELNN--KGNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHHHHHHhc--cCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44679999999999999999999998 99999999987654433221111 1468899999999998887776
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC---C-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN---N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+++...... ...+....+++|+.++..+++++.+. + .++|++||...+....
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------ 148 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA------------ 148 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC------------
Confidence 4899999998764321 11223456788999999888877532 3 6899999965432210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...+.+.+.+. +..|++++++||+.+..+....
T Consensus 149 ---------------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~-------------- 193 (237)
T PRK07326 149 ---------------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH-------------- 193 (237)
T ss_pred ---------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc--------------
Confidence 22369999999888887764 3358999999999887764320
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcc
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~ 296 (390)
.+. .. ....+..+|+++++..++..+.......+.+.++ ++.
T Consensus 194 -----------~~~----~~--~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~-~~~ 235 (237)
T PRK07326 194 -----------TPS----EK--DAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPS-RPP 235 (237)
T ss_pred -----------ccc----hh--hhccCCHHHHHHHHHHHHhCCccccccceEEecC-CCC
Confidence 000 00 0013678999999999999887666677777654 444
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.4e-18 Score=155.72 Aligned_cols=162 Identities=16% Similarity=0.187 Sum_probs=125.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------- 88 (390)
+++|+||||+|+||+++++.|.++ |++|++++|+++....+.. .+++++.+|++|.+++..+++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999998 9999999998766554432 367889999999988877665
Q ss_pred cccEEEEeccccCCccccC----ChhHHHHHhhhh----HHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADYNT----RPLDTIYSNFID----ALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~----~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||......... +....+++|+.+ +..+++.+++.+ .++|++||...+...
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------- 142 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM------------- 142 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC-------------
Confidence 3799999998765432222 234567899998 666777777777 899999996443211
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCC
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~ 219 (390)
.+.+.|+.+|...|.+.+.+. +..|+++++++||.+-.+.
T Consensus 143 --------------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 143 --------------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred --------------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 123479999999999988765 3468999999999887653
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.9e-18 Score=151.15 Aligned_cols=163 Identities=17% Similarity=0.162 Sum_probs=127.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---c
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---A 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~ 90 (390)
+.+++|+||||+|+||+++++.|+++ |+ +|++++|+++.... ...++.++.+|+.|.+.+.++++. +
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~i 74 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEAASDV 74 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 45679999999999999999999999 88 99999998765432 135788999999999999888874 8
Q ss_pred cEEEEeccccCC-c----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICTP-A----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|+|||+++.... . ...++....++.|+.++.++++++. +.+ .++|++||...+....
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~------------- 141 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP------------- 141 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC-------------
Confidence 999999998321 1 1223345567789999999988764 344 7899999976654321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
+...|+.+|...|.+.+.++.+ .+++++++||+.+.++.
T Consensus 142 --------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 142 --------------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred --------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 2347999999999998887655 38999999999987764
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7e-19 Score=158.54 Aligned_cols=228 Identities=14% Similarity=0.178 Sum_probs=154.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+|+++++|||||+|.||++++++|+++ |++|++++|+++........ .....++.++.+|+++.+.+..++.
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAEEL--RALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 367789999999999999999999999 99999999987654211111 0123468899999999998888776
Q ss_pred --cccEEEEeccccCCcccc---CChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||........ ++....++.|+.++.++.+++.+ .+.++|++||...+....
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------ 148 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG------------ 148 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC------------
Confidence 389999999965322111 23445677899999888877643 226899999965542210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...|.+++.++.+ .+++++.++|+.+++|..... ......
T Consensus 149 ---------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~------~~~~~~- 200 (258)
T PRK08628 149 ---------------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENW------IATFDD- 200 (258)
T ss_pred ---------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHH------hhhccC-
Confidence 2237999999999999988653 489999999999998743200 000000
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.......+....+. + ..++..+|+|+++..++.... ...++.+.+.++
T Consensus 201 ~~~~~~~~~~~~~~-----~---~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 201 PEAKLAAITAKIPL-----G---HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred HHHHHHHHHhcCCc-----c---ccCCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence 00011111111111 0 136778999999999997642 235677888764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=155.05 Aligned_cols=220 Identities=12% Similarity=0.103 Sum_probs=154.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++++||||||+|+||.++++.|.++ |++|++++|+.......... ....+..+.+|+.+.+++..++.
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQL----LGGNAKGLVCDVSDSQSVEAAVAAVISA 86 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh----hCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999998 99999999976532221111 12356789999999998887775
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||++|....... ..+....+++|+.++.++++++.. .+ .++|++||........
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 156 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE---------- 156 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------
Confidence 37999999997643211 123345788999999999988754 34 7999999964321110
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ .++++..++|+.+..+.... ...
T Consensus 157 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~---------~~~ 204 (255)
T PRK06841 157 -----------------------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK---------AWA 204 (255)
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc---------ccc
Confidence 1226999999999988888765 47999999999987764320 000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........... ....+.+.+|+|++++.++.... ...|+.+.+.++
T Consensus 205 ---~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg 251 (255)
T PRK06841 205 ---GEKGERAKKLI---------PAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGG 251 (255)
T ss_pred ---hhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 00111111111 12247789999999999997643 235788888775
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=154.37 Aligned_cols=203 Identities=14% Similarity=0.155 Sum_probs=140.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|+|+||||+|+||.++++.|+++ |++|++++|+++....+... ...++.++.+|+.|.+++..++. ++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDE----LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----hccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999998 99999999987655443321 12468889999999988877665 58
Q ss_pred cEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|+|||+||..... ...++....+++|+.++..++++ +++.+ .++|++||...+...
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 141 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-------------- 141 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCC--------------
Confidence 9999999875211 12233456788899996655554 45555 789999996543111
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
.+.+.|+.+|...+.+.+.++.+ .++.+.+++||.+.|+.... .......
T Consensus 142 -------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~--------~~~~~~~ 194 (248)
T PRK10538 142 -------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN--------VRFKGDD 194 (248)
T ss_pred -------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccch--------hhccCcH
Confidence 02336999999999998887654 47999999999998764320 0000000
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
... .. .. . ...++..+|+|+++..++..+
T Consensus 195 ----~~~--~~---~~-~---~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 195 ----GKA--EK---TY-Q---NTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred ----HHH--Hh---hc-c---ccCCCCHHHHHHHHHHHhcCC
Confidence 000 00 00 0 113468999999999999765
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.5e-18 Score=152.71 Aligned_cols=224 Identities=13% Similarity=0.138 Sum_probs=153.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.++++++|||||+|+||.+++++|+++ |++|++++|+++....+...... ...++.++.+|+++.+++.+++.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999998 99999999987654433221110 13468889999999998877665
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh-----CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE-----NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~-----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+|+....... .++....+.+|+.++.++++++.. .+ .++|++||..-....
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 154 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG---------- 154 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC----------
Confidence 48999999986543221 234556788999999999998863 33 789999995321110
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+.+.|+.+|...+.+++.++.+. +++++.++|+.+..+.... ..
T Consensus 155 -----------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~----------~~ 201 (263)
T PRK07814 155 -----------------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV----------VA 201 (263)
T ss_pred -----------------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh----------cc
Confidence 123479999999999999887654 4788889988876543220 00
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. -..+........+ ...+...+|+|++++.++.... ...++.+.+.++
T Consensus 202 ~-~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 202 A-NDELRAPMEKATP---------LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred C-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 0 0011111111111 1124578999999999987632 235677777664
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.4e-18 Score=152.02 Aligned_cols=223 Identities=16% Similarity=0.229 Sum_probs=155.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+||||||+|+||.++++.|.++ |++|++++|+......+...... ...++.++.+|++|.+++.+++.
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 466899999999999999999999998 99999999887654433221110 12467888999999998877654
Q ss_pred --cccEEEEeccccCCcccc---CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+|+........ ++....++.|+.++.++++++. +.+ .++|++||.......
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------ 153 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------------ 153 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC------------
Confidence 379999999976432222 3344558899999999999885 333 589999996532111
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|.+.+.+++.++++ .++++.++.|+.+-.+... . .
T Consensus 154 ---------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~---------~---~ 200 (255)
T PRK06113 154 ---------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---------S---V 200 (255)
T ss_pred ---------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc---------c---c
Confidence 02236999999999999888654 4789999999988765322 0 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....+........++ ..+...+|+++++..++.... ...|+++++.++
T Consensus 201 ~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg 249 (255)
T PRK06113 201 ITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249 (255)
T ss_pred cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 111122222222221 125578999999999987532 235789999986
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=152.09 Aligned_cols=215 Identities=16% Similarity=0.176 Sum_probs=148.6
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------cc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-------AD 91 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-------~d 91 (390)
|||||++|+||+++++.|+++ |++|++++|+.. ....+.... ......+.++.+|++|.+++.+++.+ +|
T Consensus 1 vlItG~~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE-GAKVIITYRSSEEGAEEVVEEL-KAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHHHHH-HhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 689999999999999999999 999999988752 221111110 00123578899999999988887754 69
Q ss_pred EEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecc-cccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTC-EVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~-~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+|||++|..... .........++.|+.++.++++++.. .+ .++|++||. .+|+..
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~--------------- 143 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA--------------- 143 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC---------------
Confidence 999999976421 11234566788999999999988864 33 689999996 444432
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
+.+.|+.+|...+.+.+.++++ .+++++++||+.+.++... ....
T Consensus 144 -------------------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~-------------~~~~ 191 (239)
T TIGR01830 144 -------------------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD-------------KLSE 191 (239)
T ss_pred -------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh-------------hcCh
Confidence 1236999999999888777554 4899999999988665322 1111
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+........+. .-+.+++|+++++..++.... ...+++||+.++
T Consensus 192 ~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 192 KVKKKILSQIPL---------GRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHhcCCc---------CCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 122222222221 125579999999998885532 135789999774
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.1e-18 Score=150.68 Aligned_cols=220 Identities=14% Similarity=0.131 Sum_probs=152.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||.+++++|+++ |++|++++|+.... ...... ....+.++.+|+++.+++..+++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEA----LGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHh----cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999 99999999865211 111110 13468899999999998886664
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||........ .+....+++|+.++.++++++.. .+ .++|++||...|....
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------- 148 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI--------- 148 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC---------
Confidence 389999999986432211 23445678999999988887743 22 5899999987664321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+. |+++++++|+.+..+.... .
T Consensus 149 ------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~----------~ 194 (248)
T TIGR01832 149 ------------------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA----------L 194 (248)
T ss_pred ------------------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc----------c
Confidence 11269999999999999887664 7999999999998764320 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
... ........... ....++..+|+|++++.++..... ..|+++.+.++
T Consensus 195 ~~~-~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 195 RAD-EDRNAAILERI---------PAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred ccC-hHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 000 00001111111 123578899999999999975332 34666666554
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.6e-18 Score=152.86 Aligned_cols=228 Identities=15% Similarity=0.191 Sum_probs=153.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++++++||||+|+||+++++.|.++ |++|++++|+.+....+...... ...++.++.+|+.|.+++..++.
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999998 99999999986544433221111 12357889999999988877765
Q ss_pred -cccEEEEeccccCCccc-------------------cCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeeccccc
Q 016370 89 -MADLTINLAAICTPADY-------------------NTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVY 143 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~-------------------~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy 143 (390)
.+|+|||+|+...+... ..+....+++|+.++..++.+ +++.+ .++|++||...+
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 165 (278)
T PRK08277 86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF 165 (278)
T ss_pred CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence 48999999996532211 123445677899988765544 44444 789999998765
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCC
Q 016370 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 144 ~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~ 220 (390)
.... +...|+.+|...+.+.+.++.+. ++++.+++|+.+..+..
T Consensus 166 ~~~~---------------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~ 212 (278)
T PRK08277 166 TPLT---------------------------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN 212 (278)
T ss_pred CCCC---------------------------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence 4321 22369999999999998887665 79999999999988743
Q ss_pred CCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC-C-CCCCCceEEecCC
Q 016370 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-P-ARANGHIFNVGNP 292 (390)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~-~-~~~~~~~~nv~~~ 292 (390)
.... .... ..............| ..-+...+|+|++++.++.. . ....|+.+.+.+|
T Consensus 213 ~~~~----~~~~--~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 213 RALL----FNED--GSLTERANKILAHTP---------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred hhhh----cccc--ccchhHHHHHhccCC---------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 2000 0000 000011111222211 12255689999999998875 2 2346778888775
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.3e-18 Score=149.94 Aligned_cols=218 Identities=16% Similarity=0.210 Sum_probs=150.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------- 89 (390)
++||||||+|+||+++++.|.++ |++|++++|++.. ...+..... ....++.++.+|+.|.+.+.+++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLND-GYRVIATYFSGNDCAKDWFEEYG-FTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhh-ccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999998 8999999988531 111111000 0124688999999999988777653
Q ss_pred ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+++...... ..++....++.|+.++.++.. .+++.+ .++|++||...+....
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------- 147 (245)
T PRK12824 81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF------------- 147 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-------------
Confidence 899999999764221 123445667799999888744 445555 8999999976553321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
....|+.+|.+.+.+++.++. ..++++++++|+.+.++.... ..
T Consensus 148 --------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-------------~~ 194 (245)
T PRK12824 148 --------------------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-------------MG 194 (245)
T ss_pred --------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-------------cC
Confidence 122699999999988887764 347999999999998875430 11
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........+ ...+...+|+++++..++.... ...|+.+++.++
T Consensus 195 ~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12824 195 PEVLQSIVNQIP---------MKRLGTPEEIAAAVAFLVSEAAGFITGETISINGG 241 (245)
T ss_pred HHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 111222222222 1224468999999988886532 245789999986
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7e-18 Score=154.80 Aligned_cols=224 Identities=11% Similarity=0.038 Sum_probs=154.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+.+|++|||||+|+||.++++.|+++ |++|+++.|+.. ....+..... .....+.++.+|++|.+++..+++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~-G~~Vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYARE-GADVAISYLPVEEEDAQDVKKIIE-ECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEecCCcchhhHHHHHHHHH-HcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 366789999999999999999999999 999998876532 2222211100 012457789999999988877665
Q ss_pred ----cccEEEEeccccCC-----ccccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCC
Q 016370 89 ----MADLTINLAAICTP-----ADYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+|+.... .....+....+++|+.++..+++++... +.++|++||...|....
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~--------- 194 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP--------- 194 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC---------
Confidence 37999999986421 1122345667889999999999888653 26899999987664321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ .|+++.+++|+.+.+|.... ..
T Consensus 195 ------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~--------~~- 241 (294)
T PRK07985 195 ------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--------GG- 241 (294)
T ss_pred ------------------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc--------cC-
Confidence 1236999999999999888765 58999999999999985320 00
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.............+. ..+...+|+|+++..++.... ...++++.+.++
T Consensus 242 --~~~~~~~~~~~~~~~---------~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG 290 (294)
T PRK07985 242 --QTQDKIPQFGQQTPM---------KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290 (294)
T ss_pred --CCHHHHHHHhccCCC---------CCCCCHHHHHHHHHhhhChhcCCccccEEeeCCC
Confidence 001111122221111 124568999999999987542 235778888875
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=149.19 Aligned_cols=217 Identities=13% Similarity=0.140 Sum_probs=149.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.++++|||||+|+||+++++.|.++ |+.|++.+|+.+....+... ...++.++.+|+.+.+++..++.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAE----LGERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHH----hCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999998 89998888876655443221 12468889999999998887754
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccc-cccccCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEV-YGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~v-y~~~~~~~~~e~~~~ 157 (390)
++|+|||+|+...... ...+....+++|+.++.++++++.+ .+ .++|++||... ++..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP----------- 147 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC-----------
Confidence 4899999999764321 1234556788999999888877642 33 78999999643 3321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ .++++++++|+.+..+...
T Consensus 148 -----------------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~------------- 191 (245)
T PRK12936 148 -----------------------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG------------- 191 (245)
T ss_pred -----------------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc-------------
Confidence 1126999999888887776544 4799999999987654322
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..............+ ...+...+|+++++..++.... ...|+.+++.++
T Consensus 192 ~~~~~~~~~~~~~~~---------~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12936 192 KLNDKQKEAIMGAIP---------MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG 241 (245)
T ss_pred ccChHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 000000011111111 1225569999999988886532 235789999885
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-18 Score=158.66 Aligned_cols=202 Identities=14% Similarity=0.072 Sum_probs=131.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+.+++|+||||+|+||.++++.|+++ |++|++++|+......+...... ....+.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999 99999999987654433222111 124688999999999988877753
Q ss_pred --ccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHh----CC---CcEEEeecccccccccCCC--CCC
Q 016370 90 --ADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSE----NN---KRLIHFSTCEVYGKTIGSF--LPK 153 (390)
Q Consensus 90 --~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~---~~~v~~Ss~~vy~~~~~~~--~~e 153 (390)
+|+|||+||..... ...+.....+.+|+.++.++++++.. .+ .|+|++||...+....... ..+
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~ 161 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA 161 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence 89999999975321 12234566788999999988877653 22 4999999977654221110 000
Q ss_pred CCCCC-CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc----CccEEEeecceecCCC
Q 016370 154 DSPLR-QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN----GLEFTIVRPFNWIGPR 219 (390)
Q Consensus 154 ~~~~~-~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~i~G~~ 219 (390)
..... ..+.......... ........|.+.|+.||++.+.+.+.+++++ |++++++|||.+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 162 PADLGDLSGFEAGFKAPIS-MADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred ccchhhhhcchhccccccc-ccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 00000 0000000000000 0000112356789999999888777776553 7999999999998643
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.2e-18 Score=152.66 Aligned_cols=202 Identities=14% Similarity=0.102 Sum_probs=140.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--------c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--------M 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--------~ 89 (390)
++|+||||+|+||.++++.|.++ |++|++++|+.+..+.+.. .+++.+.+|+.|.+++..++. .
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999998 9999999998765544322 257889999999887766553 3
Q ss_pred ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHH----HHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPV----VKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l----~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|.+||++|...... ..++....++.|+.++.++ ++.+++.+ .++|++||...+...
T Consensus 75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-------------- 140 (256)
T PRK08017 75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-------------- 140 (256)
T ss_pred CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC--------------
Confidence 689999998654221 1223446778899887765 56666676 889999996332211
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHH---hhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE---GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
...+.|+.+|...|.+.+.+ ....+++++++||+.+..+...
T Consensus 141 -------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~---------------- 185 (256)
T PRK08017 141 -------------------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTD---------------- 185 (256)
T ss_pred -------------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhh----------------
Confidence 02336999999999887654 3445899999999776544211
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.+. ......+ +...+...+.+++++|+++++..+++.+.
T Consensus 186 -~~~-~~~~~~~--~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 186 -NVN-QTQSDKP--VENPGIAARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred -ccc-chhhccc--hhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence 000 0011111 11223334568999999999999998864
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=149.58 Aligned_cols=221 Identities=16% Similarity=0.165 Sum_probs=151.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+.+++||||||+|+||.++++.|+++ |++|+++ +|++.....+...... ...++.++.+|++|.+.+.+++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999998 9999998 8876544332211100 12468899999999998887776
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||++|...... ..+.....+..|+.++.++++++.. .+ .++|++||...+....
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------- 150 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------- 150 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----------
Confidence 5899999999763221 1123455678899998888776653 33 6799999965443211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+++.++.+ .|++++++||+.+..+....
T Consensus 151 -----------------------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~------------ 195 (247)
T PRK05565 151 -----------------------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS------------ 195 (247)
T ss_pred -----------------------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc------------
Confidence 1226999999988887776554 48999999999987654320
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
............ .....+...+|+++.+..++..... ..++.+++.++
T Consensus 196 -~~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 196 -FSEEDKEGLAEE---------IPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred -cChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence 111111111111 1112356889999999999876432 35678888774
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-17 Score=148.01 Aligned_cols=223 Identities=16% Similarity=0.204 Sum_probs=170.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+||||||||++|++++++|+++ |++|+++.|++.....+. ..+++..+|+.++..+...+++.|.++++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~-~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~ 71 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR-GHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS 71 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC-CCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence 58999999999999999999999 999999999987766554 489999999999999999999999999998
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
.... .. . ...........+..+.+. .+ ++++++|....-..
T Consensus 72 ~~~~-~~----~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~------------------------------- 113 (275)
T COG0702 72 GLLD-GS----D-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAA------------------------------- 113 (275)
T ss_pred cccc-cc----c-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCC-------------------------------
Confidence 7553 11 1 122233334444455544 33 78888887543111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
....|..+|..+|..+.. .|++++++|+..+|..... .. .......+.+....+.+
T Consensus 114 ----~~~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~--------------~~--~~~~~~~~~~~~~~~~~ 169 (275)
T COG0702 114 ----SPSALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGA--------------AF--IEAAEAAGLPVIPRGIG 169 (275)
T ss_pred ----CccHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccch--------------hH--HHHHHhhCCceecCCCC
Confidence 223699999999999954 5899999998777765432 11 22334444444444333
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~ 315 (390)
..+++..+|++.++..++..+. ..+++|.++++ +..+..++++.+....|++...
T Consensus 170 --~~~~i~~~d~a~~~~~~l~~~~-~~~~~~~l~g~-~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 170 --RLSPIAVDDVAEALAAALDAPA-TAGRTYELAGP-EALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred --ceeeeEHHHHHHHHHHHhcCCc-ccCcEEEccCC-ceecHHHHHHHHHHHhCCccee
Confidence 7899999999999999999876 57899999998 7999999999999999987654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6e-18 Score=152.37 Aligned_cols=228 Identities=16% Similarity=0.209 Sum_probs=149.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----hhccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
.+.+|++|||||+|+||.++++.|+++ |++|+++.++... ...+.+... .....+.++.+|+++.+++.+++.
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~-G~~vv~i~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQ-GAKAVAIHYNSAASKADAEETVAAVK-AAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC-CCcEEEEecCCccchHHHHHHHHHHH-HhCCcEEEEecCcCCHHHHHHHHHH
Confidence 345689999999999999999999998 9997777654321 111111000 012467889999999999887775
Q ss_pred ------cccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCC
Q 016370 89 ------MADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ------~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||..... ....+....+++|+.++..+++++... +.++++++|.......
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~--------- 153 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT--------- 153 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC---------
Confidence 389999999975321 112245567889999999998887643 2467766433221110
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+ ..+.|+.+|.+.|.+.+.++.+. ++++++++|+.+.++... +...
T Consensus 154 ~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~-------~~~~ 202 (257)
T PRK12744 154 P------------------------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY-------PQEG 202 (257)
T ss_pred C------------------------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc-------cccc
Confidence 0 12369999999999999987664 699999999999776432 0000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
..... .........+ -....+.+++|+|+++..++.......|+++++.++
T Consensus 203 -~~~~~-~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg 253 (257)
T PRK12744 203 -AEAVA-YHKTAAALSP-------FSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGG 253 (257)
T ss_pred -cchhh-cccccccccc-------cccCCCCCHHHHHHHHHHhhcccceeecceEeecCC
Confidence 00000 0000001111 112247889999999999998533235789999885
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.6e-18 Score=148.45 Aligned_cols=217 Identities=15% Similarity=0.104 Sum_probs=152.7
Q ss_pred EEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---ccEEEEec
Q 016370 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---ADLTINLA 97 (390)
Q Consensus 21 lItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~d~Vih~a 97 (390)
|||||+|+||++++++|+++ |++|++++|++........... ...+++++.+|++|.+++.+++.. +|++||++
T Consensus 1 lItGas~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE-GARVTIASRSRDRLAAAARALG--GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence 69999999999999999998 9999999998655443222110 124688999999999999998875 79999999
Q ss_pred cccCCccc----cCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 98 AICTPADY----NTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 98 ~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
+....... .++....+++|+.++.+++++....+ .++|++||...|....
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~------------------------- 132 (230)
T PRK07041 78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA------------------------- 132 (230)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC-------------------------
Confidence 97643211 23455678899999999998665545 8999999987664321
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
+.+.|+.+|...+.+.+.++.+. +++++.++|+.+-.+.... ........+........+.
T Consensus 133 --------~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~---------~~~~~~~~~~~~~~~~~~~- 194 (230)
T PRK07041 133 --------SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSK---------LAGDAREAMFAAAAERLPA- 194 (230)
T ss_pred --------cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHh---------hhccchHHHHHHHHhcCCC-
Confidence 33479999999999999887654 5788889988775543210 0000001112222222111
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
..+...+|+|+++..++.... ..++.|++.++
T Consensus 195 --------~~~~~~~dva~~~~~l~~~~~-~~G~~~~v~gg 226 (230)
T PRK07041 195 --------RRVGQPEDVANAILFLAANGF-TTGSTVLVDGG 226 (230)
T ss_pred --------CCCcCHHHHHHHHHHHhcCCC-cCCcEEEeCCC
Confidence 113467999999999998643 56889999986
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-17 Score=149.20 Aligned_cols=221 Identities=14% Similarity=0.123 Sum_probs=152.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+|+|+||||+|+||+++++.|.++ |++|+++.|+++..+.+...... ...++.++.+|+.+.+++.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKELRAEIEA-EGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999998 99999999987655433221110 12467899999999998888776
Q ss_pred -cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC-------------CCcEEEeecccccccccCCC
Q 016370 89 -MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN-------------NKRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~-------------~~~~v~~Ss~~vy~~~~~~~ 150 (390)
.+|+|||+++....... ..+....++.|+.++..+++++... +.++|++||...+....
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 161 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP--- 161 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC---
Confidence 38999999997543211 2345567889999999888776421 14899999976543210
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCC
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
+...|+.+|...+.+++.++.+ .++++++++|+.+++|....
T Consensus 162 ------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~----- 206 (258)
T PRK06949 162 ------------------------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH----- 206 (258)
T ss_pred ------------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh-----
Confidence 2237999999999999887655 47999999999999885430
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecC
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGN 291 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~ 291 (390)
. +.......+....+. ..+...+|+++++..++.... ...|..+.+.+
T Consensus 207 ----~---~~~~~~~~~~~~~~~---------~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dg 255 (258)
T PRK06949 207 ----H---WETEQGQKLVSMLPR---------KRVGKPEDLDGLLLLLAADESQFINGAIISADD 255 (258)
T ss_pred ----c---cChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence 0 000111111111111 124447999999999887532 23455655554
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.7e-18 Score=149.52 Aligned_cols=202 Identities=11% Similarity=0.074 Sum_probs=144.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+||++|||||+|.||+.++++|+++ |++|++++|+++....+...... ...++.++.+|++|.+++..+++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999 99999999987654433221111 12468889999999998877765
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||....... .++....+.+|+.++.++++.+ ++.+ .++|++||...++...
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 150 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP------------ 150 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC------------
Confidence 38999999997643211 1234456778999888777655 4444 7899999987765321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...+.+.+.++. ..|++++++||+.+-.|.... .
T Consensus 151 ---------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~------------~- 196 (241)
T PRK07454 151 ---------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT------------E- 196 (241)
T ss_pred ---------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc------------c-
Confidence 223699999999988877653 348999999999987664220 0
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
...... ....++..+|+|++++.++..+.
T Consensus 197 -----------~~~~~~----~~~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 197 -----------TVQADF----DRSAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred -----------cccccc----ccccCCCHHHHHHHHHHHHcCCc
Confidence 000000 01125789999999999998764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-17 Score=147.57 Aligned_cols=224 Identities=17% Similarity=0.174 Sum_probs=154.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++.++++|||||+|.||.+++++|+++ |++|++++|++............ ....+..+.+|++|.+.+..++..
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999998 99999999987654433221110 123577889999999988877653
Q ss_pred ---ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+||...... ...+....+++|+.++..+++++.. .+ .++|++||.......
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 152 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR----------- 152 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC-----------
Confidence 799999999753211 1233445788999998888776653 33 789999986432110
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|...+.+++.++.+ .|+++.+++|+.+..+..... ..
T Consensus 153 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~-------~~-- 201 (254)
T PRK08085 153 ----------------------DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL-------VE-- 201 (254)
T ss_pred ----------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh-------cc--
Confidence 02236999999999999988765 489999999999988753200 00
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...+........| ...+...+|+|+++..++.... ...|+...+.++
T Consensus 202 --~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 202 --DEAFTAWLCKRTP---------AARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred --CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 0111122222222 1236678999999999887532 245677777664
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-17 Score=147.07 Aligned_cols=221 Identities=16% Similarity=0.125 Sum_probs=146.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
|++|.+|||||+|+||++++++|.++ |++|+++.++ ............ .....+..+.+|+.|.+++.+++.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCGPNSPRRVKWLEDQK-ALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 9998886543 222211111100 012356778999999988887765
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||...... ...+....+++|+.++..+.++ +++.+ .++|++||.......
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 147 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------- 147 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-----------
Confidence 3899999999764211 1234456778999996665554 44555 789999996432110
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
...+.|+.+|...+.+.+.++++ .++++++++|+.+.+|...
T Consensus 148 ----------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~------------- 192 (246)
T PRK12938 148 ----------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK------------- 192 (246)
T ss_pred ----------------------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh-------------
Confidence 02336999999998888777644 4799999999999877432
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.........+....+ ...+...+|+++++..++... ....++.+.+.++
T Consensus 193 ~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 193 AIRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred hcChHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 111222222222222 122456899999999888653 2246678887764
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.8e-18 Score=150.96 Aligned_cols=165 Identities=16% Similarity=0.197 Sum_probs=120.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~Vih 95 (390)
+++||||||+|+||++++++|+++ |++|++++|++.....+..... ....++.++.+|+.|.+.+..++. ++|+|||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAA-RRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHH-hcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 468999999999999999999998 9999999998654433221110 012468899999999999998887 6999999
Q ss_pred eccccCCccccC----ChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 96 LAAICTPADYNT----RPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 96 ~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
+|+......... .....+++|+.++..+.+ .+.+.+ +++|++||...+... +
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------~---------- 140 (257)
T PRK09291 80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---------P---------- 140 (257)
T ss_pred CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---------C----------
Confidence 999764322221 233456788888766554 444555 899999996432111 0
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI 216 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 216 (390)
....|+.+|...|.+.+.+..+ .|++++++||+.+.
T Consensus 141 --------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 141 --------------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred --------------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 1236999999999888776543 58999999998764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=148.93 Aligned_cols=224 Identities=13% Similarity=0.154 Sum_probs=155.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+.+|++|||||+|.||+++++.|.++ |++|++++|+.+....+....... ...++.++.+|+.+.+++..++.
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999998 999999999876544332211110 12467889999999988776665
Q ss_pred --cccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||..... ...++....+.+|+.++..+++++. +.+ .++|++||...+....
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---------- 155 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR---------- 155 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC----------
Confidence 379999999974321 1223455678899999999988764 344 7899999976554321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+.+.|+.+|...+.+++.++.+ .+++++.++|+.+.+|.... ...
T Consensus 156 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---------~~~ 203 (257)
T PRK09242 156 -----------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---------PLS 203 (257)
T ss_pred -----------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc---------ccC
Confidence 2236999999999999887654 48999999999998875320 000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...+........++.. +...+|++.++..++.... ...++.+.+.++
T Consensus 204 --~~~~~~~~~~~~~~~~---------~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 204 --DPDYYEQVIERTPMRR---------VGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred --ChHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 0112222222222211 3347899999999886532 235677777764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-17 Score=147.61 Aligned_cols=221 Identities=16% Similarity=0.087 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+.+|+++||||+|.||.++++.|.++ |++|+++.++.... ..+.. .++.++.+|++|.+++.++++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELRE-------KGVFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHh-------CCCeEEEecCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999 99999887654322 22211 257889999999998888776
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHH----HHHHHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPV----VKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l----~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ...+....+++|+.++..+ +..+++.+ .++|++||...++...
T Consensus 77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~---------- 146 (255)
T PRK06463 77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA---------- 146 (255)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------
Confidence 3799999999753211 1223446778899996544 44555444 7999999977654210
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.....|+.+|.+.+.+.+.++.+ .++++.+++|+.+-.+.... ....
T Consensus 147 ----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~--------~~~~ 196 (255)
T PRK06463 147 ----------------------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS--------GKSQ 196 (255)
T ss_pred ----------------------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc--------ccCc
Confidence 02236999999999999888754 47999999999885543210 0000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+........+ ...+...+|+|++++.++.... ...|+.+.+.++
T Consensus 197 ~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 246 (255)
T PRK06463 197 EEAEKLRELFRNKTV---------LKTTGKPEDIANIVLFLASDDARYITGQVIVADGG 246 (255)
T ss_pred cchHHHHHHHHhCCC---------cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 000111111111111 2234669999999999987643 245788888876
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=148.72 Aligned_cols=222 Identities=13% Similarity=0.162 Sum_probs=150.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||+|.||.+++++|.++ |++|++++|+.... ..+.++.+|++|++++.++++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999875421 257889999999988887775
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||........ ++....+++|+.++..+++++. +.+ .++|++||...+....
T Consensus 70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 139 (258)
T PRK06398 70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR---------- 139 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC----------
Confidence 489999999975432222 2233457899999988877664 334 7999999976553221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+. ++++.+++|+.+-.+........ .......
T Consensus 140 -----------------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~--~~~~~~~ 194 (258)
T PRK06398 140 -----------------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAEL--EVGKDPE 194 (258)
T ss_pred -----------------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhc--cccCChh
Confidence 23479999999999999887664 38899999988865532100000 0000000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............ .....+...+|+|+++..++.... ...|+.+.+.++
T Consensus 195 ~~~~~~~~~~~~---------~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg 243 (258)
T PRK06398 195 HVERKIREWGEM---------HPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGG 243 (258)
T ss_pred hhHHHHHhhhhc---------CCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCc
Confidence 000001111111 112235679999999999887542 246677777775
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=147.80 Aligned_cols=191 Identities=14% Similarity=0.132 Sum_probs=142.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----ccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----ADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----~d~ 92 (390)
|++++||||+|+||.+++++|+++ |++|++++|++...+.+... ..++.++.+|++|.+++.+++++ +|.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~ 74 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQ-----SANIFTLAFDVTDHPGTKAALSQLPFIPEL 74 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh-----cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence 468999999999999999999998 99999999987655443321 24678899999999999998875 689
Q ss_pred EEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeeccc-ccccccCCCCCCCCCCCCCcccc
Q 016370 93 TINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCE-VYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 93 Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~-vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
+||+||...... ..++....+++|+.++.++++++... +.++|++||.. .++..
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------------------ 136 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP------------------ 136 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC------------------
Confidence 999998643211 11223457889999999999988753 36799998853 22110
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
....|+.+|...+.+.+.+. +..|++++++||+.+++|....
T Consensus 137 ----------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~------------------- 181 (240)
T PRK06101 137 ----------------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK------------------- 181 (240)
T ss_pred ----------------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------------------
Confidence 12369999999999988775 3458999999999999875330
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.... . ...+..+|+|+.+...++..
T Consensus 182 ------~~~~---~----~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 182 ------NTFA---M----PMIITVEQASQEIRAQLARG 206 (240)
T ss_pred ------CCCC---C----CcccCHHHHHHHHHHHHhcC
Confidence 0000 0 01367999999999999975
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-17 Score=148.08 Aligned_cols=218 Identities=14% Similarity=0.103 Sum_probs=149.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
++|+||||||+|+||+++++.|+++ |++|+++.++. .....+... ...++.++.+|+.|.+++..++++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~-G~~vv~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFARE-GARVVVNYHQSEDAAEALADE----LGDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHH----hCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4579999999999999999999998 99998876543 332222211 124688899999999988877753
Q ss_pred ---ccEEEEeccccCC----------ccccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCC
Q 016370 90 ---ADLTINLAAICTP----------ADYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 90 ---~d~Vih~a~~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~ 151 (390)
+|+|||+|+.... ....++....++.|+.++.++++++. +.+ .++|++||......
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------ 152 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP------ 152 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC------
Confidence 8999999986311 00112334568899999999998875 333 68999998532111
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
. .|.+.|+.+|.+.|.+++.++++ .++++..++||.+-.+....
T Consensus 153 -----~----------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~------ 199 (253)
T PRK08642 153 -----V----------------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA------ 199 (253)
T ss_pred -----C----------------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc------
Confidence 0 13347999999999999998765 37899999999886543210
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
. .-...........| ...+...+|+|+++..++... ....|+.+.+.++
T Consensus 200 --~----~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 200 --A----TPDEVFDLIAATTP---------LRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred --c----CCHHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 0 00111112222211 123788999999999999753 2356788888775
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-17 Score=147.16 Aligned_cols=215 Identities=13% Similarity=0.080 Sum_probs=151.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+.+|++|||||+|.||+++++.|.++ |++|++++|+..... ...++.++.+|+.+.+++.+++..
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPETV---------DGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhhhh---------cCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999998 999999999765411 124688999999999988887754
Q ss_pred --ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh-----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE-----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~-----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+||....... ..+....+++|+.++..+++++.. .+ .++|++||...+....
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 143 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP---------- 143 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC----------
Confidence 6999999997532211 123446778999999999987753 23 6899999975432211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
..+.|+.+|...|.+++.++.++ .+++..++|+.+..+.... ....
T Consensus 144 -----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~---------~~~~ 191 (252)
T PRK07856 144 -----------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSEL---------HYGD 191 (252)
T ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhh---------hccC
Confidence 22369999999999999887654 2789999999887664220 0000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
...........| ...+...+|+|++++.++... ....|+.+.+.++
T Consensus 192 --~~~~~~~~~~~~---------~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg 238 (252)
T PRK07856 192 --AEGIAAVAATVP---------LGRLATPADIAWACLFLASDLASYVSGANLEVHGG 238 (252)
T ss_pred --HHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCC
Confidence 011111111111 112456899999999988753 2356788888876
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-17 Score=147.92 Aligned_cols=219 Identities=16% Similarity=0.165 Sum_probs=148.6
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhh-----------hccccccccCCCCCeeEEeCCCCCh
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKI-----------KHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----------~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
++++++||||||+| .||.+++++|.++ |++|++++|++.+. ..+... .......+.++.+|+++.
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAK-GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE-IESYGVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHc-CCcEEEEcCCccccccccccchhhHHHHHHH-HHhcCCeEEEEECCCCCH
Confidence 35678999999996 6999999999999 99999999872211 001110 001134688999999999
Q ss_pred hHHHHhhc-------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccc
Q 016370 81 SRLEGLIK-------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYG 144 (390)
Q Consensus 81 ~~~~~~~~-------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~ 144 (390)
+++..++. .+|+|||+|+........ .+....+.+|+.++..+++++... + .++|++||...++
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 88877665 379999999875432211 234556889999999999887532 3 6899999976554
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~ 221 (390)
... ....|+.+|.+.+.+++.++.+ .+++++.++|+.+..+...
T Consensus 160 ~~~---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~ 206 (256)
T PRK12748 160 PMP---------------------------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT 206 (256)
T ss_pred CCC---------------------------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence 321 1236999999999998887654 4799999999887655321
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 222 FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........+. ..+...+|+|+.+..++.... ...++++++.++
T Consensus 207 ----------------~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 207 ----------------EELKHHLVPKFPQ---------GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred ----------------hhHHHhhhccCCC---------CCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 0111111111110 113447999999998887532 235788888764
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=150.29 Aligned_cols=196 Identities=11% Similarity=0.090 Sum_probs=140.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
|.+++||||||||.||++++++|.++ |++|++++|+++........ ...+.++.+|+.|++++..++.
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAE-----LGLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH-----hccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999998 99999999987665443221 1257889999999998776664
Q ss_pred -cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|++||+||......... .....+++|+.++..+++.+ .+.+ .++|++||...+....
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 145 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVP----------- 145 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCC-----------
Confidence 3799999999864322211 23456778999888776655 4455 7899999975432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.+.. ..|+++++++|+.+-.+...
T Consensus 146 ----------------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------- 189 (273)
T PRK07825 146 ----------------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------- 189 (273)
T ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc--------------
Confidence 233699999988877666543 35899999999887544211
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
+.+ ......++..+|+|+.++.++.++.
T Consensus 190 -----------~~~------~~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 190 -----------GTG------GAKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred -----------ccc------cccCCCCCCHHHHHHHHHHHHhCCC
Confidence 000 0112247889999999999999753
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-17 Score=146.96 Aligned_cols=229 Identities=14% Similarity=0.137 Sum_probs=155.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++.+++++||||+|.||.+++++|+++ |++|++++|+++........... ...++.++.+|++|.++++.++..
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 567789999999999999999999998 99999999887654433221111 124688899999999998887753
Q ss_pred ---ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeeccc-ccccccCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCE-VYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~-vy~~~~~~~~~e~~~ 156 (390)
+|+|||+||...... ..++....+++|+.++..+++++. +.+ .++|++||.. .++..
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 154 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE---------- 154 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC----------
Confidence 899999999875321 223445567789998887766553 344 7999999853 22211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++++. |++++.++|+.+..+....... . ..
T Consensus 155 ------------------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~--~~ 205 (265)
T PRK07097 155 ------------------------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRE---L--QA 205 (265)
T ss_pred ------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhh---c--cc
Confidence 22369999999999999887664 8999999999998875320000 0 00
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
..-...+...+....+ ...+...+|+|..+..++... ....++.+.+.++
T Consensus 206 ~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 256 (265)
T PRK07097 206 DGSRHPFDQFIIAKTP---------AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG 256 (265)
T ss_pred cccchhHHHHHHhcCC---------ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence 0000001111111111 112556899999999999863 2346777887775
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=153.66 Aligned_cols=216 Identities=15% Similarity=0.181 Sum_probs=149.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++++++|+||||+|.||.++++.|.++ |++|++++|++.....+...... ....+.++.+|++|.++++++++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567789999999999999999999999 99999999987654433221111 13467889999999998887765
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhhHHH----HHHHHHhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFIDALP----VVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~----l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+|+....... .++....+++|+.++.+ ++..+++.+ .++|++||...|....
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~--------- 152 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP--------- 152 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC---------
Confidence 48999999997532211 12234456677776555 455555555 7899999987764321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
..+.|+.+|...+.+.+.+..+ .++.+++++|+.+..|...
T Consensus 153 ------------------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~---------- 198 (334)
T PRK07109 153 ------------------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD---------- 198 (334)
T ss_pred ------------------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh----------
Confidence 2236999999998887776543 3699999999998766322
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.. ....... ......++..+|+|++++.++.++ .+.+.+++.
T Consensus 199 -------~~-~~~~~~~-------~~~~~~~~~pe~vA~~i~~~~~~~----~~~~~vg~~ 240 (334)
T PRK07109 199 -------WA-RSRLPVE-------PQPVPPIYQPEVVADAILYAAEHP----RRELWVGGP 240 (334)
T ss_pred -------hh-hhhcccc-------ccCCCCCCCHHHHHHHHHHHHhCC----CcEEEeCcH
Confidence 00 0001110 011223568999999999999975 345677653
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.9e-17 Score=146.37 Aligned_cols=226 Identities=12% Similarity=0.133 Sum_probs=155.6
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
...+.+|+|+||||+|+||++++++|.++ |++|++++|+++....+...... ...++.++.+|+.+.+++..++++
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFARID 83 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 33467899999999999999999999998 99999999987554433221111 134688999999999988877763
Q ss_pred -----ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCC
Q 016370 90 -----ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|+|||+++....... .++....+..|+.++.++++++. +.+ .++|++||...+....
T Consensus 84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------- 155 (256)
T PRK06124 84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA-------- 155 (256)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC--------
Confidence 6999999997643211 12344567789999988886554 345 7899999965432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+ .++++..++|+.+.++.... .
T Consensus 156 -------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~---------~ 201 (256)
T PRK06124 156 -------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA---------M 201 (256)
T ss_pred -------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh---------h
Confidence 1136999999999988877654 37999999999999875320 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.. -..+........+ ...+++.+|++++++.++..... ..|+.+.+.++
T Consensus 202 ~~--~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 202 AA--DPAVGPWLAQRTP---------LGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred cc--ChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 00 0111111221111 12378899999999999987532 34666676664
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=154.94 Aligned_cols=181 Identities=13% Similarity=0.110 Sum_probs=128.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||.+++++|+++ |++|++++|+.+........ ...+.++.+|++|.+++++++.
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~-----l~~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAG-----IDGVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH-----hhhCeEEEccCCCHHHHHHHHHHHHhc
Confidence 457789999999999999999999999 99999999987655433221 1247889999999998887774
Q ss_pred --cccEEEEeccccCCcc--ccCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|+|||+||...... ........+.+|+.++..+++ .+++.+ .++|++||....... ...+.+...
T Consensus 97 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~----~~~~~~~~~ 172 (315)
T PRK06196 97 GRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP----IRWDDPHFT 172 (315)
T ss_pred CCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC----CCccccCcc
Confidence 3899999999764321 123345678899999655554 455555 799999996432211 000000000
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCC
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~ 221 (390)
. ...+...|+.+|.+.+.+.+.++.+ .|++++++|||.+.+|...
T Consensus 173 -----------~------~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~ 220 (315)
T PRK06196 173 -----------R------GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQR 220 (315)
T ss_pred -----------C------CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccc
Confidence 0 0013457999999999888777543 4899999999999988543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-17 Score=148.00 Aligned_cols=207 Identities=15% Similarity=0.152 Sum_probs=142.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|+|+||||+|+||++++++|.++ |++|++++|+....+.+...... ....+.++.+|+.|.+++.+++. .+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE-GWRLALADVNEEGGEETLKLLRE-AGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999998 99999999987654433221111 13467889999999988887775 48
Q ss_pred cEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 91 DLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
|+|||+||......... +....+++|+.++.++.+. +++.+ .++|++||...+....
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-------------- 144 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP-------------- 144 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC--------------
Confidence 99999999875432222 2334567898877765554 55666 7999999976543221
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
..+.|+.+|...+.+.+.+..+ .++++++++|+.+..+..... ........
T Consensus 145 -------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~ 198 (270)
T PRK05650 145 -------------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF-------RGPNPAMK 198 (270)
T ss_pred -------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc-------ccCchhHH
Confidence 2237999999988877777654 489999999999987753300 00000111
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
....... ...+++++|+|+.++.++++.
T Consensus 199 ~~~~~~~-------------~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 199 AQVGKLL-------------EKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHh-------------hcCCCCHHHHHHHHHHHHhCC
Confidence 1111111 123578999999999999864
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-17 Score=147.96 Aligned_cols=224 Identities=13% Similarity=0.132 Sum_probs=153.4
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
-.+.+++||||||+|.||.+++++|+++ |++|++++|+. ..+.+..... .....+.++.+|+.+.+.+..+++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHGT-NWDETRRLIE-KEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCc-HHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999998 99999999873 2222211111 113468899999999998888776
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+|+....... ..+....+++|+.++..+++++. +.+ .++|++||...+....
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 158 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK--------- 158 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC---------
Confidence 47999999997643211 22344567789999777765553 444 7899999976653321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|.+.+.+++.++++. |+++++++|+.+..+.....
T Consensus 159 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~---------- 204 (258)
T PRK06935 159 ------------------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPI---------- 204 (258)
T ss_pred ------------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhc----------
Confidence 12269999999999998887654 79999999999877643210
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ............+ ...+...+|+|+.+..++.... ...|+++.+.++
T Consensus 205 ~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 205 RA-DKNRNDEILKRIP---------AGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred cc-ChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 00 0001111111111 1236678999999999887532 246778888775
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=147.70 Aligned_cols=219 Identities=15% Similarity=0.079 Sum_probs=148.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+++||||||+|.||.+++++|+++ |++|+++.++.. ....+..... .....+.++.+|+++.++++.++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAKETAEEVR-SHGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999 999988866443 2222211110 013468899999999988877765
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC----C--CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN----N--KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||++|....... .++....+.+|+.++..+++++... + .++|++||...... .
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-----------~- 147 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP-----------L- 147 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC-----------C-
Confidence 37999999997643211 2334567889999999998876542 2 58999999632111 1
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|...+.+++.++.+ .+++++.++|+.+.+|....
T Consensus 148 ---------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~------------- 193 (256)
T PRK12743 148 ---------------------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM------------- 193 (256)
T ss_pred ---------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc-------------
Confidence 12347999999999998877654 47999999999999875330
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........+.+. ..+.+.+|+++++..++.... ...|..+.+.++
T Consensus 194 ~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg 242 (256)
T PRK12743 194 DDSDVKPDSRPGIPL---------GRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGG 242 (256)
T ss_pred cChHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 001111111111111 113478999999998887542 235777877775
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=149.13 Aligned_cols=222 Identities=12% Similarity=0.063 Sum_probs=147.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
.+|+++||||+|+||.++++.|.++ |++|++.. ++.+........... ....+..+.+|+.+.+.+..++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLAND-GALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 5689999999999999999999998 99998875 443333222111100 12356778899998776654332
Q ss_pred -------cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCC
Q 016370 89 -------MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|+|||+||......... .....+++|+.++..+++++...- .++|++||...+....
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------- 153 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP------- 153 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC-------
Confidence 5899999999753322222 234566799999999988765432 5999999986543211
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
....|+.+|...+.+.+.++.++ ++++.++.|+.+.++....
T Consensus 154 --------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~--------- 198 (252)
T PRK12747 154 --------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE--------- 198 (252)
T ss_pred --------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh---------
Confidence 22369999999999998876554 8999999999998874320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... .......... .....+..++|+|+++..++.... ...|+.+.+.++
T Consensus 199 ~~~~---~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 199 LLSD---PMMKQYATTI--------SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred cccC---HHHHHHHHhc--------CcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence 0000 0001111100 012236789999999999886532 245678888765
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-17 Score=147.02 Aligned_cols=225 Identities=13% Similarity=0.164 Sum_probs=151.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
.++++++|||||+|.||++++++|.++ |++|++++|+.+. ...+..... ....++.++.+|+.|.+.+.+++..
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTDDGLAETAEHIE-AAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 367789999999999999999999998 9999999987542 222211110 0124678899999999888877764
Q ss_pred ----ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|+|||+||....... .++....+++|+.++..+++++ ++.+ .++|++||..-+.....
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 154 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG-------- 154 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------
Confidence 6999999997643211 2234556779999987776654 3444 68999998653322110
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++|+.+.++.... +
T Consensus 155 -----------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~------~---- 201 (254)
T PRK06114 155 -----------------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR------P---- 201 (254)
T ss_pred -----------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc------c----
Confidence 01236999999999988888654 48999999999998775320 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.... .........|. .-+...+|+|++++.++... ....|+++.+.++
T Consensus 202 -~~~~-~~~~~~~~~p~---------~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 202 -EMVH-QTKLFEEQTPM---------QRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred -cchH-HHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 0111 11112222221 12456899999999988653 2346778888775
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=147.80 Aligned_cols=197 Identities=13% Similarity=0.159 Sum_probs=141.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----ccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----ADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----~d~ 92 (390)
||+|+||||+|+||.++++.|+++ |++|++++|+++...............++.++.+|+.|.+++.+++++ +|+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence 579999999999999999999999 999999999876554332211111134788999999999988887764 699
Q ss_pred EEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 93 TINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 93 Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
|||++|....... .++....++.|+.++.++++++.. .+ .++|++||....... +
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~------- 143 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR---------A------- 143 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC---------C-------
Confidence 9999987643211 223345678999999988877653 34 789999986321110 0
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
....|+.+|...+.+.+.++. ..|+++++++|+.++++...
T Consensus 144 -----------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~------------------- 187 (243)
T PRK07102 144 -----------------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA------------------- 187 (243)
T ss_pred -----------------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh-------------------
Confidence 122699999999988887753 45899999999999876321
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
+... . ....+..+|+|+.+...++++
T Consensus 188 ------~~~~--~-----~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 188 ------GLKL--P-----GPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred ------ccCC--C-----ccccCCHHHHHHHHHHHHhCC
Confidence 0000 0 112456899999999999974
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-17 Score=146.61 Aligned_cols=198 Identities=15% Similarity=0.222 Sum_probs=137.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
++++||||||+|.||++++++|++++|++|++++|+++. ...+.+........++.++.+|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 467899999999999999999999845999999998764 3332221111112368899999999887655554
Q ss_pred cccEEEEeccccCCc-cccCChh---HHHHHhhhhHHH----HHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPA-DYNTRPL---DTIYSNFIDALP----VVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~-~~~~~~~---~~~~~nv~~~~~----l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|++||++|..... ....++. +.+++|+.++.. +++++++.+ .++|++||...+...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~------------- 153 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR------------- 153 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-------------
Confidence 499999999886432 1111221 357899988766 566777766 899999997532111
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.+...|+.+|.....+.+.+. +..++++++++|+.+..+...
T Consensus 154 --------------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~--------------- 198 (253)
T PRK07904 154 --------------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA--------------- 198 (253)
T ss_pred --------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc---------------
Confidence 022369999999986655543 446899999999999765221
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.. ... ...+..+|+|+.++.++.++
T Consensus 199 ------~~-~~~-----------~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 199 ------HA-KEA-----------PLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred ------cC-CCC-----------CCCCCHHHHHHHHHHHHHcC
Confidence 00 000 11367899999999999875
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-17 Score=145.84 Aligned_cols=224 Identities=13% Similarity=0.081 Sum_probs=152.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+++||||||+|+||.++++.|.++ |++|++++|+......+.+.... ....+.++.+|+.+.+++..+++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 466789999999999999999999999 99999999987654433321111 12357789999999988877665
Q ss_pred --cccEEEEeccccCC-----ccccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTP-----ADYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+|+.... .....+....++.|+.++..+++++ ++.+ .++|++||...+...
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 152 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPG---------- 152 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCC----------
Confidence 37999999986421 1111234457889999988777665 4444 789999986432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+.+.|+.+|...+.+++.++.+. |++++.+.|+.+-.+.... ..
T Consensus 153 -----------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~---------~~ 200 (252)
T PRK07035 153 -----------------------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA---------LF 200 (252)
T ss_pred -----------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc---------cc
Confidence 123479999999999999887554 7999999999886653220 00
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ...........+ ...+...+|+|+.+..++.+.. ...|+++++.++
T Consensus 201 ~~--~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 201 KN--DAILKQALAHIP---------LRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred CC--HHHHHHHHccCC---------CCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 00 111122222211 1125568999999999887643 246778887764
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-17 Score=146.71 Aligned_cols=224 Identities=14% Similarity=0.113 Sum_probs=154.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+.+++|+||||+|+||.+++++|.++ |++|++++|+.+........... ...++.++.+|+.+.+++..++++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999998 99999999987654433221111 234688999999999888877653
Q ss_pred --ccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||++|...... ..++....+++|+.++..+++++ .+.+ .++|++||...+....
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---------- 152 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP---------- 152 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC----------
Confidence 699999999753211 12345567789999987766543 3344 7899999976654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+. ++++.++.||.+-.+.... ..
T Consensus 153 -----------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~----------~~ 199 (253)
T PRK06172 153 -----------------------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRR----------AY 199 (253)
T ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh----------hc
Confidence 22369999999999998887654 7999999999886553220 00
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
..............+. ..+...+|+++.+.+++... ....|+.+++.++
T Consensus 200 ~~~~~~~~~~~~~~~~---------~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg 249 (253)
T PRK06172 200 EADPRKAEFAAAMHPV---------GRIGKVEEVASAVLYLCSDGASFTTGHALMVDGG 249 (253)
T ss_pred ccChHHHHHHhccCCC---------CCccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 0001111111111111 12457899999999998764 2346788888875
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.6e-17 Score=145.79 Aligned_cols=224 Identities=15% Similarity=0.067 Sum_probs=151.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
++++++|||||+|.||.+++++|.++ |++|++++|+++....+...... ....+.++.+|+.+.+.+.++++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999998 99999999987655443321111 12467889999999998887776
Q ss_pred -cccEEEEeccccCC--cc---ccCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTP--AD---YNTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 -~~d~Vih~a~~~~~--~~---~~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||.... .. ..++....+++|+.++..+++ .+++.+ .++|++||...+....
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------- 151 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF---------- 151 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC----------
Confidence 48999999997532 11 112345678899987776654 444555 7899999975442110
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|.+.+.+.+.++.+. |+++.+++||.+-.+.... ..
T Consensus 152 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~ 199 (254)
T PRK07478 152 ----------------------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRA----------MG 199 (254)
T ss_pred ----------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccc----------cc
Confidence 022379999999999998887654 6999999999987663220 00
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. ............+ ...+...+|+|++++.++.... ...|+++.+.++
T Consensus 200 ~-~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 200 D-TPEALAFVAGLHA---------LKRMAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred C-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 0 0011111111111 1225579999999999887542 235677777664
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5e-17 Score=146.65 Aligned_cols=229 Identities=13% Similarity=0.109 Sum_probs=153.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|.||.++++.|+++ |++|++++|+++........... .....+.++.+|++|.+++..++.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987654433221110 012467889999999998888776
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||...... ..++....+++|+.++..+++++. +.+ .++|++||...+....
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 153 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP--------- 153 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC---------
Confidence 4899999999753211 122345567789999988887764 334 6899999975432210
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+. |+++..++||.+-.+..... ....
T Consensus 154 ------------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~------~~~~ 203 (260)
T PRK07063 154 ------------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW------WNAQ 203 (260)
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh------hhcc
Confidence 22369999999999998886553 79999999998865532100 0000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ...........|. .-+...+|+|.+++.++.... ...|+.+.+.++
T Consensus 204 ~~~-~~~~~~~~~~~~~---------~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg 253 (260)
T PRK07063 204 PDP-AAARAETLALQPM---------KRIGRPEEVAMTAVFLASDEAPFINATCITIDGG 253 (260)
T ss_pred CCh-HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccccccCCcEEEECCC
Confidence 000 0011111111111 124568999999999987642 246777888775
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7e-17 Score=143.41 Aligned_cols=214 Identities=14% Similarity=0.163 Sum_probs=149.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh-hHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD-SRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~-~~~~~~~~~~d~V 93 (390)
+++|+++||||+|+||+++++.|.++ |++|++++|++.... ..++.++.+|+.+. +.+.+.+..+|+|
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~id~l 71 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ-GAQVYGVDKQDKPDL----------SGNFHFLQLDLSDDLEPLFDWVPSVDIL 71 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC-CCEEEEEeCCccccc----------CCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence 56789999999999999999999998 999999998754311 24678899999987 4444445569999
Q ss_pred EEeccccCC-----ccccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 94 INLAAICTP-----ADYNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 94 ih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
||+|+.... ....++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------- 135 (235)
T PRK06550 72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG---------------- 135 (235)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------------
Confidence 999986421 111224456788999999999887753 33 6899999975432211
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
....|+.+|...+.+.+.++.+. |+++++++|+.+.++.... ... -..+
T Consensus 136 -----------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~---------~~~--~~~~ 187 (235)
T PRK06550 136 -----------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA---------DFE--PGGL 187 (235)
T ss_pred -----------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc---------ccC--chHH
Confidence 12369999999998888877654 8999999999998875320 000 0111
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........+ ...+...+|+|++++.++.... ...++++.+.++
T Consensus 188 ~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 188 ADWVARETP---------IKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHHhccCC---------cCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence 112222211 2235678999999999986532 245677777764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-17 Score=146.81 Aligned_cols=223 Identities=15% Similarity=0.214 Sum_probs=152.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.++++++|||||+|.||++++++|.++ |++|++++|+......+.+. ...++.++.+|+.|.+++.++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAAS----LGERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----hCCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987654433322 12468899999999998887776
Q ss_pred --cccEEEEeccccCCcc---ccCChhHHHHHhhhhHHHHHHHHHh---CC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD---YNTRPLDTIYSNFIDALPVVKYCSE---NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~---~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||...... ..++....+++|+.++..+++++.. .+ .++|++||...+....
T Consensus 78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------ 145 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT------------ 145 (261)
T ss_pred hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC------------
Confidence 3799999999753221 1223445677899999888876643 22 7899999865432110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...+.+.+.++.+ .++++.+++|+.+..+..... .. ..
T Consensus 146 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~------~~---~~ 195 (261)
T PRK08265 146 ---------------------GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL------SG---GD 195 (261)
T ss_pred ---------------------CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh------cc---cc
Confidence 1236999999999999887654 479999999998766532100 00 00
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.......... . .....+...+|+|+++..++.... ...|+.+.+.++
T Consensus 196 -~~~~~~~~~~--~------~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 196 -RAKADRVAAP--F------HLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred -hhHHHHhhcc--c------CCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence 0000111100 0 011124568999999999987532 246778888875
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-17 Score=145.54 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=147.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.|++++||||||+|+||.+++++|.++ |++|++++|+.......... ....++.+|+.+.+++..++.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADE------VGGLFVPTDVTDEDAVNALFDTAAET 76 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH------cCCcEEEeeCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987654433221 123578999999998888776
Q ss_pred --cccEEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecc-cccccccCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTC-EVYGKTIGSFLPKD 154 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~-~vy~~~~~~~~~e~ 154 (390)
++|+|||+||...+.. ........+++|+.++..+++.+. +.+ .++|++||. .+++...
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~------- 149 (255)
T PRK06057 77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT------- 149 (255)
T ss_pred cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC-------
Confidence 3799999998753211 112245677789999877766553 344 689998885 4444311
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
+...|+.+|...+.+.+.++. ..+++++++||+.+.+|....
T Consensus 150 --------------------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~--------- 194 (255)
T PRK06057 150 --------------------------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQE--------- 194 (255)
T ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhh---------
Confidence 122599999877777665543 337999999999998875330
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.......... +.... ++ ...+..++|+++++..++.... ...++.+.+.++
T Consensus 195 ~~~~~~~~~~-~~~~~--~~-------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 195 LFAKDPERAA-RRLVH--VP-------MGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred hccCCHHHHH-HHHhc--CC-------CCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 0000001110 11100 11 1247889999999988886532 234677777664
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=147.95 Aligned_cols=230 Identities=12% Similarity=0.115 Sum_probs=148.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|++|||||+|+||.++++.|+++ |++|++++|+.+....+...... ...++.++.+|+.+++.+.+++. +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999998 99999999987554333221110 12467889999999998877776 3
Q ss_pred ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||....... .++....+++|+.++..+++++.+ .+ .++|++||...+....
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 147 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP------------ 147 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC------------
Confidence 7999999987532211 123345678999998776666543 22 5899999865332210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
..+.|+.+|...+.+.+.++.+ .|++++.++|+.+..|.................
T Consensus 148 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~- 205 (256)
T PRK08643 148 ---------------------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPD- 205 (256)
T ss_pred ---------------------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCc-
Confidence 1236999999999888877653 479999999999987642200000000000000
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........... ....+...+|+|+++..++.... ...|+.+.+.++
T Consensus 206 -~~~~~~~~~~~---------~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 206 -EWGMEQFAKDI---------TLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred -hHHHHHHhccC---------CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 00000011110 11135678999999999887542 246778888765
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=148.87 Aligned_cols=203 Identities=15% Similarity=0.140 Sum_probs=143.8
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
...+.+++|+||||+|.||.++++.|.++ |++|++++|+.+....+...... ....+.++.+|+.|.+++.++++
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34466789999999999999999999998 99999999987654433221110 12357789999999998888877
Q ss_pred ----cccEEEEeccccCCcccc------CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYN------TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~------~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|+|||+||........ .+....+++|+.++.++++++ ++.+ .++|++||..++....
T Consensus 113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 186 (293)
T PRK05866 113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS------ 186 (293)
T ss_pred HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC------
Confidence 589999999976432211 223457788999987777654 3555 8999999976543210
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
| ..+.|+.+|...+.+++.+..+ .++++++++|+.+-.+...
T Consensus 187 --p------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~--------- 231 (293)
T PRK05866 187 --P------------------------LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA--------- 231 (293)
T ss_pred --C------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc---------
Confidence 0 1236999999999888877544 4899999999877554221
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
. .. .. .+ ...+..+++|+.++.++++.
T Consensus 232 ----~-----------~~--~~--~~---~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 232 ----P-----------TK--AY--DG---LPALTADEAAEWMVTAARTR 258 (293)
T ss_pred ----c-----------cc--cc--cC---CCCCCHHHHHHHHHHHHhcC
Confidence 0 00 00 01 12467899999999999874
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=147.78 Aligned_cols=229 Identities=8% Similarity=0.041 Sum_probs=156.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+|+||||+|.||+++++.|.++ |++ |++++|+..+......... .....+.++.+|+++.+++.+++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGEAQAAELE-ALGAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 467889999999999999999999998 888 9999997654432211110 013467889999999998887765
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+++....... .+.....++.|+.++.++++++.+ .+ .++|++||...++...
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-------- 152 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP-------- 152 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC--------
Confidence 37999999997642211 122345678999999999877643 22 4799999987665321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
..+.|+.+|...|.+.+.++.+. +++++.++|+.++++..... ...
T Consensus 153 -------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~------~~~ 201 (260)
T PRK06198 153 -------------------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRI------QRE 201 (260)
T ss_pred -------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhh------hhh
Confidence 12369999999999998776543 68999999999988753200 000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.......+........ ....+++.+|+++++..++..... ..++.+++.++
T Consensus 202 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~ 253 (260)
T PRK06198 202 FHGAPDDWLEKAAATQ---------PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS 253 (260)
T ss_pred ccCCChHHHHHHhccC---------CccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence 0000111222222111 123467899999999998865432 35788888875
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.6e-17 Score=144.85 Aligned_cols=223 Identities=11% Similarity=0.092 Sum_probs=152.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|.||.++++.|+++ |++|++++|+....+.+...... ...++..+.+|++|.+.+.+++.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKLADEIGT-SGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987654433221111 12467889999999998887765
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||........ ++....+++|+.++..+++++.. .+ .++|++||....-... +
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------~ 155 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--------P 155 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--------C
Confidence 489999999976432221 22344567999999888887642 22 4689998854211000 0
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.....|+.+|...+.+.+.++.+. |+++.+++||.+-.+...
T Consensus 156 -----------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~------------ 200 (253)
T PRK05867 156 -----------------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE------------ 200 (253)
T ss_pred -----------------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc------------
Confidence 012369999999999999887553 899999999998666422
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. ...........+. ..+...+|+|+++..++... ....|+.+.+.+|
T Consensus 201 -~~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG 249 (253)
T PRK05867 201 -PY-TEYQPLWEPKIPL---------GRLGRPEELAGLYLYLASEASSYMTGSDIVIDGG 249 (253)
T ss_pred -cc-hHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCC
Confidence 01 1111122222111 12567999999999998753 2246788888875
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.5e-17 Score=146.68 Aligned_cols=162 Identities=15% Similarity=0.100 Sum_probs=123.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
||++|||||+|+||+++++.|.++ |++|++++|+......+.. .++.++.+|+.+.+.+.++++ +
T Consensus 1 mk~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999998 9999999998765544322 357788999999988877764 4
Q ss_pred ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 90 ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+|+|||+||....... .++....+++|+.++.++++++.. ...++|++||...+....
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 138 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP-------------- 138 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC--------------
Confidence 8999999997643222 233456778999999888887633 226799999854322110
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
..+.|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 139 -------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 139 -------------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred -------------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 2236999999999988776544 58999999999997764
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-16 Score=144.14 Aligned_cols=237 Identities=10% Similarity=0.040 Sum_probs=153.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+|++|||||+|.||.++++.|.++ |++|++++|+.................++.++.+|++|.++++.+++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 56789999999999999999999999 99999999987654433221111112468899999999998888776
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHH----HHHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVV----KYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~----~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|++||+||....... .++....+++|+.+...++ ..+++.+ .++|++||...+....
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~------------ 152 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP------------ 152 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC------------
Confidence 38999999997543221 1234456778877755554 4445555 7999999976532211
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+...... ..+.......
T Consensus 153 ---------------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~~~~~~~~~ 209 (263)
T PRK08339 153 ---------------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLA--QDRAKREGKS 209 (263)
T ss_pred ---------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHH--HhhhhccCCC
Confidence 1226999999999888887655 4799999999988655211000 0000000000
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCccc
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s 297 (390)
.......+....| ..-+...+|+|+++..++... ....|+.+.+.++ ..+|
T Consensus 210 ~~~~~~~~~~~~p---------~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG-~~~~ 261 (263)
T PRK08339 210 VEEALQEYAKPIP---------LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGG-RLNS 261 (263)
T ss_pred HHHHHHHHhccCC---------cccCcCHHHHHHHHHHHhcchhcCccCceEEECCC-cccc
Confidence 0111111111111 123567899999999988653 2346788888876 5554
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-17 Score=147.04 Aligned_cols=164 Identities=19% Similarity=0.171 Sum_probs=125.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------- 89 (390)
||++|||||+|+||++++++|+++ |++|++++|+.+....+..... ...+.++.+|+.|.+++.+++++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999 9999999998776554432110 24688999999999888877653
Q ss_pred -ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeeccc-ccccccCCCCCCCCCCC
Q 016370 90 -ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCE-VYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~-vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||........ ++....+++|+.++.++++++. ..+ .++|++||.. +|+..
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 144 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP------------ 144 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC------------
Confidence 69999999987532222 2345678899999999988764 344 7899999864 33321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
....|+.+|...+.+.+.++.+ .++++++++|+.+-.+
T Consensus 145 ----------------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 145 ----------------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred ----------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 1126999999999888887643 4799999999988655
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-16 Score=144.23 Aligned_cols=230 Identities=17% Similarity=0.128 Sum_probs=151.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+++++||||+|+||++++++|+++ |++|++++|+............ ...++.++.+|+.+.+++..++.
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKLADELCG--RGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHH--hCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 9999999997642221111100 12467789999999998888766
Q ss_pred --cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||......... .....++.|+.++..+++++.. .+ .++|++||....... .
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~ 149 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA----------D 149 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC----------C
Confidence 3799999999764322222 2334577899999988887643 33 689999985321000 0
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.....|+.+|...|.+.+.++.+. +++++.++|+.+.++..........|
T Consensus 150 ----------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~----- 202 (263)
T PRK08226 150 ----------------------PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP----- 202 (263)
T ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-----
Confidence 022369999999999998887554 79999999999988743210000000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.....+...+..+.|. ..+...+|+|+++..++... ....++.+-+.++
T Consensus 203 ~~~~~~~~~~~~~~p~---------~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 203 EDPESVLTEMAKAIPL---------RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred CCcHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 0011222333322221 12457899999998887542 2345677777764
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.4e-17 Score=144.86 Aligned_cols=197 Identities=15% Similarity=0.136 Sum_probs=141.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
++++|||||+|+||++++++|.++ |++|++++|++.....+....... ....+.++.+|+++.+++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999998 899999999876544332211100 12468889999999988877665
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|+|||+||....... .......+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 148 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP------------ 148 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC------------
Confidence 48999999998653221 12234567899999988887763 444 7899999964322110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.+...|+.+|...+.+.+.+..+ .++++++++|+.+.++...
T Consensus 149 --------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~--------------- 193 (248)
T PRK08251 149 --------------------GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA--------------- 193 (248)
T ss_pred --------------------CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---------------
Confidence 02236999999999888877654 3789999999998765322
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
. . +. ....+..+|.|+.+++++++.
T Consensus 194 ------~-~-~~----------~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 194 ------K-A-KS----------TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred ------c-c-cc----------CCccCCHHHHHHHHHHHHhcC
Confidence 0 0 00 112567899999999999874
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=142.03 Aligned_cols=217 Identities=10% Similarity=0.102 Sum_probs=147.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
++.+|+||||||+|.||++++++|+++ |++|+++.++. +..+.+... .+++++.+|++|.+.+.+++..
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~------~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQE------TGATAVQTDSADRDAVIDVVRKSGA 75 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHH------hCCeEEecCCCCHHHHHHHHHHhCC
Confidence 466789999999999999999999998 99998876643 333222111 2467788999998888777754
Q ss_pred ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 90 ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
+|+|||+||...... ...+....+++|+.++..++..+... +.++|++||..... .+.
T Consensus 76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~----- 140 (237)
T PRK12742 76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPV----- 140 (237)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCC-----
Confidence 899999999764221 12244567889999998887655443 26999999964210 011
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
.+...|+.+|...|.+++.++.+ .++++++++|+.+..+... . ...
T Consensus 141 -----------------~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~---------~-~~~---- 189 (237)
T PRK12742 141 -----------------AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP---------A-NGP---- 189 (237)
T ss_pred -----------------CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc---------c-ccH----
Confidence 12347999999999999887654 4799999999998765421 0 001
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.........+. ..+...+|+++++..++..... ..|..+.+.++
T Consensus 190 ~~~~~~~~~~~---------~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 190 MKDMMHSFMAI---------KRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence 11111111111 1246789999999998875432 35677777664
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-17 Score=146.10 Aligned_cols=222 Identities=12% Similarity=0.129 Sum_probs=146.0
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCC-CCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTG-ADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~-~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|+||||+|+||.++++.|.++ |++|++++|+ .+....+........ ...+..+.+|+.|.+.+.+++. .
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ-GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4899999999999999999998 9999999997 443333221110001 1234568899999998877765 3
Q ss_pred ccEEEEeccccCCcccc----CChhHHHHHhhh----hHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYN----TRPLDTIYSNFI----DALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~----~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+|+........ ++....+++|+. ++..++.++++.+ +++|++||...+....
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~------------- 146 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP------------- 146 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-------------
Confidence 79999999976432211 123445667887 7788888888777 8999999987654421
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-----CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-----GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+. +++++.++|+.+.+|.... ....
T Consensus 147 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~---------~~~~ 197 (251)
T PRK07069 147 --------------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP---------IFQR 197 (251)
T ss_pred --------------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH---------Hhhh
Confidence 12369999999999988776442 4889999999998875320 0000
Q ss_pred h-HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 V-LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. -......+..+.+ ...+.+++|+|++++.++.... ...|+.+.+.++
T Consensus 198 ~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 198 LGEEEATRKLARGVP---------LGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred ccchhHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 0 0011111222211 1234579999999999876532 234556655543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-17 Score=150.26 Aligned_cols=186 Identities=11% Similarity=-0.006 Sum_probs=127.4
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.++++|+||||||+|+||.++++.|.++ |++|++++|+.+........... .....+.++.+|+.|.+++.+++.
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999 99999999986554322111100 012467889999999998887765
Q ss_pred ----cccEEEEeccccCCcc--ccCChhHHHHHhhhh----HHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD--YNTRPLDTIYSNFID----ALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~--~~~~~~~~~~~nv~~----~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||...+.. ........+++|+.+ +..+++.+++.+ .++|++||...+.... ...++. ..
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~-~~ 168 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDL-QW 168 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCcccc-Cc
Confidence 3899999999764322 123445678899999 666777777666 8999999976432111 000000 00
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEE--EeecceecCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFT--IVRPFNWIGPR 219 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~--ilR~~~i~G~~ 219 (390)
+ . ...+...|+.+|.+.+.+.+.++++. +++++ .+.||.+..+.
T Consensus 169 -----------~-~------~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 169 -----------E-R------RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred -----------c-c------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 0 0 01244589999999999998876654 55554 44788886654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-16 Score=143.88 Aligned_cols=229 Identities=13% Similarity=0.147 Sum_probs=150.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|.||.++++.|+++ |++|++++|+ +........... ...++.++.+|+++.+++..++.
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 9999999998 443332211111 12358889999999988877665
Q ss_pred --cccEEEEeccccCC-ccccC----ChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTP-ADYNT----RPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~-~~~~~----~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+||.... ..... .....+++|+.++..+++++. +.+.++|++||...+....
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 149 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL---------- 149 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC----------
Confidence 37999999997632 11111 233456689988876666543 3346899999976543211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+++.++.+. |+++..+.||.+..+...... + ....
T Consensus 150 -----------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~-~~~~ 201 (272)
T PRK08589 150 -----------------------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLT----G-TSED 201 (272)
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhc----c-cchh
Confidence 12369999999999999887544 799999999998766432000 0 0000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+........ ....+...+|+|++++.++.... ...|+.+.+.++
T Consensus 202 ~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg 251 (272)
T PRK08589 202 EAGKTFRENQKWMT---------PLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGG 251 (272)
T ss_pred hHHHHHhhhhhccC---------CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence 00000100000000 11125679999999999887532 245677888775
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=143.09 Aligned_cols=220 Identities=15% Similarity=0.153 Sum_probs=143.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+|+||||||+|+||+.+++.|+++ |++|+++.+ +++........... ...++.++.+|+.+.+++.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR-GWSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999 999887654 43333222111100 12468899999999988877664
Q ss_pred cccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHHHH-HhCC-------CcEEEeecccc-cccccCCCCCCC
Q 016370 89 MADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVKYC-SENN-------KRLIHFSTCEV-YGKTIGSFLPKD 154 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~-~~~~-------~~~v~~Ss~~v-y~~~~~~~~~e~ 154 (390)
.+|+|||+||....... ..+....+.+|+.++..+++++ +... .++|++||... ++...
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------- 152 (248)
T PRK06947 80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------- 152 (248)
T ss_pred CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-------
Confidence 48999999997643111 1223456789999988887543 3221 35999998643 33210
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
....|+.+|...+.+.+.++.+. +++++++||+.+..|.... .
T Consensus 153 --------------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~--------~ 198 (248)
T PRK06947 153 --------------------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS--------G 198 (248)
T ss_pred --------------------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc--------c
Confidence 11259999999998888876654 7999999999998874320 0
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..+. .........+. .-+..++|+++.++.++.+.. ...|+.+.+.++
T Consensus 199 ~~~~----~~~~~~~~~~~---------~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 199 GQPG----RAARLGAQTPL---------GRAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred CCHH----HHHHHhhcCCC---------CCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 0011 11111111111 113568999999999988753 245666666553
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=142.09 Aligned_cols=218 Identities=15% Similarity=0.158 Sum_probs=145.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
|++|||||+|+||+++++.|+++ |++|+++.|+ +........... ....++.++.+|+.|.+++.++++ .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD-GYRVAANCGPNEERAEAWLQEQG-ALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998 9999998883 332222111100 012468899999999988877665 3
Q ss_pred ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||++|....... ..+....+..|+.++..+++ .+++.+ .++|++||........
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------- 145 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQF------------- 145 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-------------
Confidence 8999999997643211 12344566789998777544 445555 7899999863321110
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
....|+.+|...+.+++.++++ .+++++.++|+.+.++... .+.
T Consensus 146 --------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-------------~~~ 192 (242)
T TIGR01829 146 --------------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM-------------AMR 192 (242)
T ss_pred --------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-------------ccc
Confidence 1236999999888888776543 4899999999999887533 111
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........++. .+...+|+++++..++..+. ...|+.+.+.++
T Consensus 193 ~~~~~~~~~~~~~~---------~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg 239 (242)
T TIGR01829 193 EDVLNSIVAQIPVG---------RLGRPEEIAAAVAFLASEEAGYITGATLSINGG 239 (242)
T ss_pred hHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence 22222222222221 13456899999988776532 245788888875
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=147.90 Aligned_cols=214 Identities=13% Similarity=0.144 Sum_probs=148.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++++||||||+|.||+++++.|.++ |++|++++|+.+....+...... ....+.++.+|++|.+++.+++.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 456789999999999999999999999 99999999987665443321111 13467788999999998888774
Q ss_pred --cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+||........+ +....+++|+.++.++.+++ ++.+ .++|++||...+....
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p---------- 151 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP---------- 151 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC----------
Confidence 4899999999764432222 23456889999988877665 4444 7899999876543211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh----cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.+..+ .++.++.+.|+.+..|.....
T Consensus 152 -----------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~---------- 198 (330)
T PRK06139 152 -----------------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG---------- 198 (330)
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc----------
Confidence 1236999999877666665433 379999999999988754310
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.. . .+... .....++..+|+|++++.+++++. ..+.++.
T Consensus 199 ~~--------~-~~~~~------~~~~~~~~pe~vA~~il~~~~~~~----~~~~~g~ 237 (330)
T PRK06139 199 AN--------Y-TGRRL------TPPPPVYDPRRVAKAVVRLADRPR----ATTTVGA 237 (330)
T ss_pred cc--------c-ccccc------cCCCCCCCHHHHHHHHHHHHhCCC----CEEEcCh
Confidence 00 0 01000 111236789999999999998863 2455543
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=142.07 Aligned_cols=201 Identities=10% Similarity=0.089 Sum_probs=137.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC--hhHHHHhh----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH--DSRLEGLI---- 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d--~~~~~~~~---- 87 (390)
.|++++|+||||+|+||++++++|+++ |++|++++|+......+...........+.++.+|+.+ .+.+..++
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 367789999999999999999999998 99999999988654433221111112345678889875 33444333
Q ss_pred ----ccccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCC
Q 016370 88 ----KMADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 88 ----~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
..+|+|||+||..... ...++....+++|+.++.++++++. +.+ .++|++||......
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-------- 153 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP-------- 153 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC--------
Confidence 3489999999975321 1112344568899999888877663 334 78999998532110
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc----CccEEEeecceecCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN----GLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
. .....|+.+|...+.+++.++.+. ++++++++||.+++|...
T Consensus 154 ---~----------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~-------- 200 (239)
T PRK08703 154 ---K----------------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI-------- 200 (239)
T ss_pred ---C----------------------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc--------
Confidence 0 022369999999999998887654 589999999999988532
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN 278 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 278 (390)
.. ..+ .....+...+|++..+..++..
T Consensus 201 -----~~--------~~~---------~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 201 -----KS--------HPG---------EAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred -----cc--------CCC---------CCccccCCHHHHHHHHHHHhCc
Confidence 00 001 0011245789999999999874
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=143.06 Aligned_cols=220 Identities=14% Similarity=0.181 Sum_probs=141.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc-----
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA----- 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~----- 90 (390)
||+||||||+|+||++++++|.++ |++|++++|.+ +....+... ...++.++.+|+++.++++.+++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK-GTHVISISRTENKELTKLAEQ----YNSNLTFHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc-CCEEEEEeCCchHHHHHHHhc----cCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999 99999999976 222222211 1346889999999999998887642
Q ss_pred ------cEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHH----HHHhC-C-CcEEEeecccccccccCCCCCC
Q 016370 91 ------DLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVK----YCSEN-N-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 91 ------d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~----~~~~~-~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.++||+||...+.. ...+....+++|+.+...+++ .+++. + .++|++||...+...
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 148 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY------- 148 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC-------
Confidence 27899998754311 122344556678888655554 44443 2 689999996543221
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.+...|+.+|...+.+++.++.+ .++++..++|+.+-.+......
T Consensus 149 --------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~---- 198 (251)
T PRK06924 149 --------------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIR---- 198 (251)
T ss_pred --------------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHH----
Confidence 13347999999999999888654 4689999999877654311000
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEec
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~ 290 (390)
... ..... ........ ...+ -+..++|+|+.++.++.......|+.+.+.
T Consensus 199 ~~~--~~~~~-~~~~~~~~-----~~~~----~~~~~~dva~~~~~l~~~~~~~~G~~~~v~ 248 (251)
T PRK06924 199 SSS--KEDFT-NLDRFITL-----KEEG----KLLSPEYVAKALRNLLETEDFPNGEVIDID 248 (251)
T ss_pred hcC--cccch-HHHHHHHH-----hhcC----CcCCHHHHHHHHHHHHhcccCCCCCEeehh
Confidence 000 00000 00111110 0011 257899999999999987443455555443
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-16 Score=141.64 Aligned_cols=220 Identities=14% Similarity=0.168 Sum_probs=150.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+.+|++|||||+|.||++++++|.++ |++|++++|..... ....+. ...++.++.+|+++.+++..+++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEA----LGRKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHH----cCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999998 99999998864321 111111 13468889999999998888776
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||....... .++....+++|+.++..+++++. +.+ .++|++||...+....
T Consensus 81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------- 151 (251)
T PRK12481 81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI--------- 151 (251)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC---------
Confidence 38999999997643221 23445567799999887777653 222 5899999976654321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +|+++..++||.+-.+.... .
T Consensus 152 ------------------------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~----------~ 197 (251)
T PRK12481 152 ------------------------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAA----------L 197 (251)
T ss_pred ------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhh----------c
Confidence 1126999999999999877654 58999999999886553210 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. ............|. ..+...+|+|+++..++... ....|+.+.+.++
T Consensus 198 ~~-~~~~~~~~~~~~p~---------~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 198 RA-DTARNEAILERIPA---------SRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred cc-ChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 00 00011111111111 12567899999999998753 2245677777664
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=143.05 Aligned_cols=205 Identities=15% Similarity=0.119 Sum_probs=139.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc-------ccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL-------LEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
++++++|||||+|+||.++++.|.++ |++|++++|+.+....+ .... .....++.++.+|+++.+++.+++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAEPHPKLPGTIHTAAEEI-EAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccccccchhhHHHHHHHHH-HhcCCceEEEEecCCCHHHHHHHH
Confidence 56789999999999999999999999 99999999976432111 0000 011346788999999999888777
Q ss_pred c-------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCC
Q 016370 88 K-------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 88 ~-------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~ 151 (390)
+ ++|+|||+||........ ++....+++|+.++.++++++.. .+ .++|++||.......
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----- 156 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK----- 156 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc-----
Confidence 6 489999999976432222 23455677999999999998853 23 678888874311000
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.. .+.+.|+.+|.+.|.+++.++.+. +++++.+.|+.++..
T Consensus 157 ----~~----------------------~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t---------- 200 (273)
T PRK08278 157 ----WF----------------------APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT---------- 200 (273)
T ss_pred ----cc----------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc----------
Confidence 00 133479999999999999887654 789999988732211
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.... ....+. .....+...+|+|++++.++....
T Consensus 201 ------~~~~----~~~~~~--------~~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 201 ------AAVR----NLLGGD--------EAMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred ------HHHH----hccccc--------ccccccCCHHHHHHHHHHHhcCcc
Confidence 0111 111111 111235678999999999988653
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.4e-16 Score=140.54 Aligned_cols=224 Identities=14% Similarity=0.108 Sum_probs=146.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++++++|||||+|.||.++++.|.++ |+.|+++.|+... .......... ....+.++.+|++|.+++.+++.
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~-G~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKE-KAKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999 9999888885432 2211111000 12457789999999998877765
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHH----HHHHHhCC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPV----VKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l----~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||+|+........ .+....+++|+.++..+ ++.+.+.+ .++|++||...+...
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~--------- 152 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW--------- 152 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC---------
Confidence 379999999976432222 23445678898876554 44555544 689999995432111
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|.+.+.+.+.++.+ .++++++++|+.+..|.... .
T Consensus 153 ------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~---------~ 199 (261)
T PRK08936 153 ------------------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE---------K 199 (261)
T ss_pred ------------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc---------c
Confidence 12337999998888877776544 38999999999998774320 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ...........+. ..+...+|+++.+..++.... ...+..+.+.++
T Consensus 200 ~~~--~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 200 FAD--PKQRADVESMIPM---------GYIGKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred cCC--HHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 000 1111122222111 125668999999999887543 234556666654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=144.03 Aligned_cols=228 Identities=12% Similarity=0.089 Sum_probs=145.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
++++||||+|+||.+++++|+++ |++|+++.|++.....+...... ....+.++.+|++|++.+.+++. .+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD-GFAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999998 99999999986544332221111 13468889999999998887765 37
Q ss_pred cEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|+|||+++...... ...+....+++|+.++..+++++. +.+ .++|++||........
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 145 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------- 145 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC-------------
Confidence 99999998753211 122334568899998887766553 333 6899999854322110
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc-hhh
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRV 236 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~-~~~ 236 (390)
..+.|+.+|...+.+++.++.+. ++.+++++|+.+..+....... ..... ...
T Consensus 146 --------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~---~~~~~~~~~ 202 (254)
T TIGR02415 146 --------------------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDE---ETSEIAGKP 202 (254)
T ss_pred --------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhh---hhhhcccCc
Confidence 22369999999999998776553 7999999999886653210000 00000 000
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
+.......... .....+..++|+++++..++..... ..|+.+.+.++
T Consensus 203 ~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 203 IGEGFEEFSSE---------IALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred hHHHHHHHHhh---------CCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence 00000011100 0112367889999999999987542 24555555553
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.5e-16 Score=137.76 Aligned_cols=211 Identities=14% Similarity=0.136 Sum_probs=143.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------- 89 (390)
+|++|||||+|.||++++++|.++ |++|++++|++........ ..++.++.+|+.|.+++.+++..
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLR------QAGAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH------HcCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 468999999999999999999998 9999999997654322111 12467899999999888776643
Q ss_pred ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|++||+||....... .++....+++|+.++..+...+.. .+ .++|++||.......
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------ 142 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS------------ 142 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC------------
Confidence 8999999997533211 223455677899988776655533 22 479999885422111
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.....|+.+|...|.+++.++.+. ++++.+++|+.+.-+... ...
T Consensus 143 ---------------------~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~------------~~~ 189 (236)
T PRK06483 143 ---------------------DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD------------DAA 189 (236)
T ss_pred ---------------------CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC------------CHH
Confidence 022369999999999999988765 589999999987322111 011
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.........++.. +...+|+|+++..++.. ....|+.+.+.++
T Consensus 190 ---~~~~~~~~~~~~~---------~~~~~~va~~~~~l~~~-~~~~G~~i~vdgg 232 (236)
T PRK06483 190 ---YRQKALAKSLLKI---------EPGEEEIIDLVDYLLTS-CYVTGRSLPVDGG 232 (236)
T ss_pred ---HHHHHhccCcccc---------CCCHHHHHHHHHHHhcC-CCcCCcEEEeCcc
Confidence 1112222222211 33589999999999974 3357788888775
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.1e-17 Score=144.54 Aligned_cols=162 Identities=15% Similarity=0.147 Sum_probs=119.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------- 88 (390)
||+||||||+|+||++++++|+++ |++|++++|+..... .. ....++.++.+|+.+.+++.+++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~~~--~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHPSL--AA----AAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcchhh--hh----ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 579999999999999999999998 999999998764321 11 013468889999999988877432
Q ss_pred ---cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||+|+...+.. ..++....+++|+.++..+.+.+ .+.+ .++|++||...+....
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 145 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA-------- 145 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC--------
Confidence 3789999999764311 11233456778999966655544 3444 7999999976553221
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh--cCccEEEeecceecCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE--NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G~ 218 (390)
+...|+.+|...|.+++.++.+ .++++.+++|+.+-.+
T Consensus 146 -------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 -------------------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 3347999999999999987754 5799999999887544
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-16 Score=140.00 Aligned_cols=222 Identities=10% Similarity=0.057 Sum_probs=149.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|++|||||+|.||+++++.|.++ |++|++++|+......+...... ....+.++.+|++|++.+.+++. .
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEAKLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999998 99999999987554433221111 12468899999999988877664 3
Q ss_pred ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||++|...... ..++....+++|+.++.++++++.+ .+ .++|++||..-+....
T Consensus 79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------ 146 (252)
T PRK07677 79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP------------ 146 (252)
T ss_pred ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC------------
Confidence 799999998643211 1223456788999999999888732 22 5899999864321110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh----cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+ +|+++..++||.+..+.... ...
T Consensus 147 ---------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~--------~~~-- 195 (252)
T PRK07677 147 ---------------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD--------KLW-- 195 (252)
T ss_pred ---------------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc--------ccc--
Confidence 1126999999999988876544 47999999999987542110 000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.-......+....++ ..+...+|+++++..++... ....|+.+.+.++
T Consensus 196 ~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg 244 (252)
T PRK07677 196 ESEEAAKRTIQSVPL---------GRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGG 244 (252)
T ss_pred CCHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHcCccccccCCCEEEECCC
Confidence 001122223222221 12556899999998887653 2246677777765
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-16 Score=132.97 Aligned_cols=206 Identities=17% Similarity=0.180 Sum_probs=147.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
.++|.++|||||+-||.++++.|.+. |++|++..|+.+.++.+...... ..+.....|++|++++..+++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 45688999999999999999999999 99999999999988877654221 367889999999988666665
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeeccc---ccccccCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCE---VYGKTIGSFLPKDS 155 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~---vy~~~~~~~~~e~~ 155 (390)
.+|++||.||..-..... ++....+++|+.|..+...++ .+.+ .++|.+||.+ +|.
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~----------- 148 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYP----------- 148 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCC-----------
Confidence 399999999988542221 345668889999988887765 3444 6999999964 221
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
..+.|+.+|+....+.+.+.++ .+++++.+-|+.+-....... +..+
T Consensus 149 -------------------------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v-----~~~g 198 (246)
T COG4221 149 -------------------------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTV-----RFEG 198 (246)
T ss_pred -------------------------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccc-----cCCc
Confidence 2237999999998776665433 479999999988844321100 0000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR 281 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~ 281 (390)
. ..-.... -.....+..+|+|+++.++++.|..
T Consensus 199 ~----~~~~~~~------------y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 199 D----DERADKV------------YKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred h----hhhHHHH------------hccCCCCCHHHHHHHHHHHHhCCCc
Confidence 0 0000000 0123578899999999999999864
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.5e-16 Score=140.05 Aligned_cols=203 Identities=13% Similarity=0.101 Sum_probs=137.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC--ChhHHHHhh---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK--HDSRLEGLI--- 87 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~--d~~~~~~~~--- 87 (390)
..+++|+||||||+|+||.+++++|+++ |++|++++|+......+..........++.++.+|+. +.+++.+++
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3567899999999999999999999998 9999999998765443322111112245677788886 555444443
Q ss_pred ----ccccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCC
Q 016370 88 ----KMADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 88 ----~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
..+|+|||+|+..... .........+++|+.++.++++++. +.+ .+||++||........
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------ 160 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA------ 160 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC------
Confidence 3489999999875331 1123345678899999888877663 444 8999999964322110
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+++.++.+. ++++++++|+.+-.+...
T Consensus 161 ---------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~--------- 204 (247)
T PRK08945 161 ---------------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA--------- 204 (247)
T ss_pred ---------------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh---------
Confidence 12369999999999888776554 688888888877554211
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
...... + ...+...+|+++++..++...
T Consensus 205 ------------~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 205 ------------SAFPGE------D---PQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred ------------hhcCcc------c---ccCCCCHHHHHHHHHHHhCcc
Confidence 000000 0 012567899999999987654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.1e-16 Score=138.18 Aligned_cols=220 Identities=13% Similarity=0.160 Sum_probs=151.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+.++++|||||+|.||.+++++|.++ |++|+++++.... ...+.. ....+.++.+|++|.+++..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIVEPTETIEQVTA-----LGRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCcchHHHHHHHHh-----cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 467889999999999999999999999 9999988775421 111111 12467889999999988887776
Q ss_pred ----cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 153 (253)
T PRK08993 81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI------- 153 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-------
Confidence 3899999999764321 1234556788999999988887643 22 5799999987654321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
....|+.+|.+.+.+.+.++.+ .|+++..++||.+-.+....
T Consensus 154 --------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~--------- 198 (253)
T PRK08993 154 --------------------------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ--------- 198 (253)
T ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh---------
Confidence 1126999999999999888765 47999999999997653220
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
... -..........-|. .-+...+|+|+.+..++..... ..|+.+.+.++
T Consensus 199 -~~~-~~~~~~~~~~~~p~---------~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 199 -LRA-DEQRSAEILDRIPA---------GRWGLPSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred -hcc-chHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 000 00011111111111 1256689999999999876432 35667766653
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-16 Score=140.74 Aligned_cols=229 Identities=14% Similarity=0.087 Sum_probs=152.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
++++++|||||+|.||++++++|+++ |++|++++|+++....+... ...++.++.+|+.|.+++..+++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQR----FGDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----hCCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999998 99999999987665443322 12467889999999988877765
Q ss_pred -cccEEEEeccccCCc-cc-cCC-------hhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCC
Q 016370 89 -MADLTINLAAICTPA-DY-NTR-------PLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~-~~-~~~-------~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||..... .. ... ....+++|+.++..+++++.. .+.++|++||...+....
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 151 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG------- 151 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-------
Confidence 389999999975321 11 111 234567899998888877753 225799999976553321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+. ++++..+.|+.+..+..... .. +....
T Consensus 152 --------------------------~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~-~~-~~~~~ 203 (263)
T PRK06200 152 --------------------------GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPA-SL-GQGET 203 (263)
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCcc-cc-CCCCc
Confidence 22369999999999999887654 48999999998866532100 00 00000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~ 292 (390)
................| ..-+...+|+|+++..++... ....|+.+.+.+|
T Consensus 204 ~~~~~~~~~~~~~~~~p---------~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 204 SISDSPGLADMIAAITP---------LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred ccccccchhHHhhcCCC---------CCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 00000001111111111 123567899999999988753 2246778887764
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=158.50 Aligned_cols=236 Identities=14% Similarity=0.178 Sum_probs=152.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.++.+|+||||||+|+||++++++|+++ |++|++++|+.+............ ....+..+.+|++|.+++.+++.
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999 999999999876543332111100 11356789999999999988876
Q ss_pred ----cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHH----HHHhCC--CcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVK----YCSENN--KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~----~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||......... +....+++|+.+...++. .+++.+ .++|++||...+....
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~------- 561 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK------- 561 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC-------
Confidence 4899999999764322222 234556778887766654 333433 6899999964322110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec-CCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI-GPRMDFIPGIDGPS 230 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~-G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+++.++.+ .|+++..++|+.++ |.+.. ...+....
T Consensus 562 --------------------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~-~~~~~~~~ 614 (676)
T TIGR02632 562 --------------------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIW-DGEWREER 614 (676)
T ss_pred --------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccc-cccchhhh
Confidence 2237999999999999988765 47999999999887 33211 00000000
Q ss_pred CCchhh-HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRV-LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
...... ...+..... .......+++.+|+|+++..++... ....|+++++.+|
T Consensus 615 ~~~~~~~~~~~~~~~~---------~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG 669 (676)
T TIGR02632 615 AAAYGIPADELEEHYA---------KRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGG 669 (676)
T ss_pred hhcccCChHHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 000000 000000001 1122335788999999999988643 2345789999886
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.1e-16 Score=136.27 Aligned_cols=207 Identities=18% Similarity=0.154 Sum_probs=151.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++++++|||||+-||..++++|.++ |++|+++.|+.+++..+.........-.+.++.+|+++++++..+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 467889999999999999999999999 99999999999988777665444445568899999999998888775
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+||...... .+++..+.+++|+.+...+-.+ +.+.+ .++|.++|..-|-+..
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p---------- 151 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP---------- 151 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc----------
Confidence 3999999999985432 2234456788999986665544 44555 7999999976554431
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHH---hhhcCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE---GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
-.+.|+.||...-.+-..+ .+..|+.++.+-||.+.-....
T Consensus 152 -----------------------~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~------------- 195 (265)
T COG0300 152 -----------------------YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD------------- 195 (265)
T ss_pred -----------------------chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-------------
Confidence 2347999999876554443 3556899999999777654321
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
..+..... ....+-++..+|+|+..+..+...+
T Consensus 196 ----------~~~~~~~~---~~~~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 196 ----------AKGSDVYL---LSPGELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred ----------cccccccc---ccchhhccCHHHHHHHHHHHHhcCC
Confidence 01111110 0123457789999999999999853
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.4e-16 Score=138.05 Aligned_cols=213 Identities=13% Similarity=0.133 Sum_probs=143.9
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------cc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-------AD 91 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-------~d 91 (390)
||||||+|+||.++++.|.++ |++|+++.|+.+ .......... ....++.++.+|++|.+++..+++. .|
T Consensus 1 vlItGas~giG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD-GFEICVHYHSGRSDAESVVSAIQ-AQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHH-HcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999998 999999887643 2222211110 0134688999999999988877653 69
Q ss_pred EEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHH-----hCC-CcEEEeeccc-ccccccCCCCCCCCCCCCC
Q 016370 92 LTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCS-----ENN-KRLIHFSTCE-VYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 92 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~-~~~v~~Ss~~-vy~~~~~~~~~e~~~~~~~ 160 (390)
++||++|..... ....++...++.|+.++.++++++. +.+ .++|++||.. .++..
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-------------- 144 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR-------------- 144 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC--------------
Confidence 999999875422 1233456678899999999887652 233 6899999964 33321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
....|+.+|...+.+.+.++.+ .|++++.++|+.+.++... ..
T Consensus 145 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~~- 190 (239)
T TIGR01831 145 --------------------GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA-------------EV- 190 (239)
T ss_pred --------------------CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch-------------hh-
Confidence 1236999999998888777544 4899999999998776432 11
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGN 291 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~ 291 (390)
...........|+ .-+...+|+++++..++.... ...+....+.+
T Consensus 191 ~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g 236 (239)
T TIGR01831 191 EHDLDEALKTVPM---------NRMGQPAEVASLAGFLMSDGASYVTRQVISVNG 236 (239)
T ss_pred hHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence 1111122222221 124457999999999988643 23455555555
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-16 Score=141.42 Aligned_cols=223 Identities=13% Similarity=0.117 Sum_probs=150.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++.+++||||||+|.||.+++++|+++ |++|++++|+.+........... ...++.++.+|+++.+++..++++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAAVAQLQQ-AGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999998 99999999987654332211111 123567889999999888877654
Q ss_pred ---ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+|+...... ..++....+++|+.++.++++++.. .+.++|++||...+...
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~------------ 151 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM------------ 151 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC------------
Confidence 699999998543211 1123345677999999999887754 23689999996543211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.....|+.+|...|.+++.+..+ .++++++++|+.+.+.... ..
T Consensus 152 ---------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~------------~~ 198 (264)
T PRK07576 152 ---------------------PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM------------AR 198 (264)
T ss_pred ---------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH------------hh
Confidence 02236999999999999887654 4789999999988653211 00
Q ss_pred hHH--HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLA--CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ..........+ ...+...+|+|++++.++.... ...|+.+.+.++
T Consensus 199 ~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 199 LAPSPELQAAVAQSVP---------LKRNGTKQDIANAALFLASDMASYITGVVLPVDGG 249 (264)
T ss_pred cccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence 000 00011111111 1235678999999999997632 235667777764
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.8e-16 Score=139.50 Aligned_cols=202 Identities=16% Similarity=0.112 Sum_probs=141.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++++||||||+|+||.+++++|+++ |++|++++|++.....+.... ....++.++.+|+.|.+.+..+++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALAARL--PYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHH--hcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 45689999999999999999999999 999999999876554443221 113478899999999988877665
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||....... ..+....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 147 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP------------ 147 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC------------
Confidence 37999999997643211 123345677999999988887743 33 6788888854321110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...+.+.+.++.+ .++.++++.|+.+..+... ..
T Consensus 148 ---------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~-------------~~ 193 (263)
T PRK09072 148 ---------------------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS-------------EA 193 (263)
T ss_pred ---------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh-------------hh
Confidence 1236999999988888777644 4789999999877654321 00
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
. . .. . .........++|+|++++.+++..
T Consensus 194 ----~-----~-~~--~--~~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 194 ----V-----Q-AL--N--RALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred ----c-----c-cc--c--ccccCCCCCHHHHHHHHHHHHhCC
Confidence 0 0 00 0 000113567899999999999975
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.9e-16 Score=138.86 Aligned_cols=215 Identities=14% Similarity=0.159 Sum_probs=146.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+.+++||||||+|+||+++++.|.++ |++|++++|++...+.+...... ..++.++.+|+.+.+.+.+++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSK--YGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999998 99999999987655433211100 13578899999999988877653
Q ss_pred --ccEEEEeccccCCc--cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccc-cccccCCCCCCCCCCCCCc
Q 016370 90 --ADLTINLAAICTPA--DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEV-YGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 90 --~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~v-y~~~~~~~~~e~~~~~~~~ 161 (390)
+|.+||+++..... ...++....++.|+.+...+++.+... +.++|++||... ++..
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------- 144 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS--------------- 144 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC---------------
Confidence 69999999854211 111223445678888887777766543 267999998643 2111
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
.+...|+.+|...+.+++.+..+ .+++++++||+.++++... ...
T Consensus 145 ------------------~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~-------------~~~- 192 (238)
T PRK05786 145 ------------------PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP-------------ERN- 192 (238)
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc-------------hhh-
Confidence 02236999999999888777654 3899999999999987421 000
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
+ .. .... ...++..+|+++++..++..... ..++.+.+.++
T Consensus 193 -~-~~------~~~~-----~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 193 -W-KK------LRKL-----GDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred -h-hh------hccc-----cCCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence 0 00 0000 11256679999999999976432 35666666553
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=137.65 Aligned_cols=224 Identities=14% Similarity=0.176 Sum_probs=151.1
Q ss_pred CCCCCEEEEEcCch-hHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG-FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG-~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+.++++|||||+| -||+++++.|.++ |++|++++|+............. ....++.++.+|+++.+++..+++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 45678999999998 5999999999999 99999999877554333221111 011367889999999988887775
Q ss_pred ----cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh----C--CCcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|+|||+||........ ++....+++|+.++..+++++.. . ..++|++||...+...
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-------- 164 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ-------- 164 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC--------
Confidence 379999999975322111 23445677899998888776542 2 2578888875432111
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...+.+.+.++.+ +++++.+++|+.+..|....
T Consensus 165 -------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~--------- 210 (262)
T PRK07831 165 -------------------------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK--------- 210 (262)
T ss_pred -------------------------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc---------
Confidence 02236999999999999988755 58999999999998875320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. .-......+....++ .-+...+|+|+++..++.... ...|+.+.+.++
T Consensus 211 -~--~~~~~~~~~~~~~~~---------~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~~ 260 (262)
T PRK07831 211 -V--TSAELLDELAAREAF---------GRAAEPWEVANVIAFLASDYSSYLTGEVVSVSSQ 260 (262)
T ss_pred -c--cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCchhcCcCCceEEeCCC
Confidence 0 011222222222221 124568999999999887642 235677766653
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-16 Score=143.97 Aligned_cols=184 Identities=11% Similarity=0.056 Sum_probs=130.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
..+++|+++||||+|.||.+++++|.++ |++|+++.|+.+............ ....+.++.+|+.|.++++++++.
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 4578899999999999999999999998 999999999876544332211110 123688999999999988877653
Q ss_pred -----ccEEEEeccccCCcc---ccCChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccc-cCCCCCCCCC
Q 016370 90 -----ADLTINLAAICTPAD---YNTRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKT-IGSFLPKDSP 156 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~-~~~~~~e~~~ 156 (390)
+|++||+||...... ..+..+..+.+|+.+...+.+.+. +...++|++||...+... ....+.+..+
T Consensus 89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~ 168 (313)
T PRK05854 89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERS 168 (313)
T ss_pred HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccccc
Confidence 899999999875322 224556678899999777766554 333789999997543221 1111111111
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~ 219 (390)
. .+...|+.+|.+.+.+.+.++++ .++.+.++.||.+..+.
T Consensus 169 ~----------------------~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 169 Y----------------------AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred C----------------------cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 1 13457999999999999888643 47999999999986553
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.8e-16 Score=138.85 Aligned_cols=226 Identities=15% Similarity=0.062 Sum_probs=144.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
..+++|+||||||++.||+++++.|+++ |++|+++.|+. +................+.++.+|++|.+++++++..
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQS-GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID 82 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999998 99998886643 3222221111111124678999999999888877753
Q ss_pred -----ccEEEEeccccCCc------c-c---cCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCC
Q 016370 90 -----ADLTINLAAICTPA------D-Y---NTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~------~-~---~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~ 149 (390)
+|++||+|+..... . . .......+++|+.+...+.. .+++.+ .++|++||...+...
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 159 (260)
T PRK08416 83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI--- 159 (260)
T ss_pred HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC---
Confidence 79999999864210 0 1 11233455667776555443 344444 689999996422110
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
| ....|+.+|...+.+.+.++.+. |+++..+.||.+-.+....
T Consensus 160 ------~------------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~---- 205 (260)
T PRK08416 160 ------E------------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA---- 205 (260)
T ss_pred ------C------------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh----
Confidence 0 12269999999999999887764 7999999998875442110
Q ss_pred CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... ...........|. .-+...+|+|++++.++.... ...++.+.+.++
T Consensus 206 ------~~~~-~~~~~~~~~~~~~---------~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 206 ------FTNY-EEVKAKTEELSPL---------NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred ------ccCC-HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 0000 1111111111111 125679999999999887532 245677777664
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-15 Score=140.73 Aligned_cols=213 Identities=15% Similarity=0.124 Sum_probs=147.1
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
..+++++||||||+|.||.++++.|.++ |++|++++|+......+..... ....+..+.+|++|.+++.+++.
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELG--GDDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhc--CCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999998 9999999998765544332211 12345566799999988877764
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||........ ++....+++|+.++.++++++... +.++|++||...+....
T Consensus 82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 151 (296)
T PRK05872 82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP---------- 151 (296)
T ss_pred HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC----------
Confidence 389999999986432221 223456779999999998877532 26899999976554321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.+..+ .|+.++++.|+.+..+.... . .
T Consensus 152 -----------------------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~---------~-~ 198 (296)
T PRK05872 152 -----------------------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRD---------A-D 198 (296)
T ss_pred -----------------------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhh---------c-c
Confidence 2236999999999998877543 58999999999887664320 0 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
... .....+....+.+ ...++..+|+|+++..++...
T Consensus 199 ~~~-~~~~~~~~~~~~p-------~~~~~~~~~va~~i~~~~~~~ 235 (296)
T PRK05872 199 ADL-PAFRELRARLPWP-------LRRTTSVEKCAAAFVDGIERR 235 (296)
T ss_pred ccc-hhHHHHHhhCCCc-------ccCCCCHHHHHHHHHHHHhcC
Confidence 000 1111111111111 123567999999999999874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=136.74 Aligned_cols=234 Identities=9% Similarity=0.087 Sum_probs=148.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC-CCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG-ADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++++++|||||+|.||.++++.|+++ |++|++++|+++............. ..++..+.+|++|.+++.+++.
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 466789999999999999999999999 9999999998765443322111111 1367789999999988877664
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+||........ .+....+++|+.+...++++ +++.+ .++|++||...+....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP--------- 154 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC---------
Confidence 379999999975422211 13345567787776555544 44454 7999999975432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ .|++++.++|+.+-.+..... + +....
T Consensus 155 ------------------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~--~--~~~~~ 206 (265)
T PRK07062 155 ------------------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRR--Y--EARAD 206 (265)
T ss_pred ------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhH--H--HHhhc
Confidence 1236999999988888776554 479999999998866532100 0 00000
Q ss_pred h-hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 P-RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
. .....+.........++ ..-+...+|+|+++..++... ....|+++.+.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~p-------~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 207 PGQSWEAWTAALARKKGIP-------LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred cCCChHHHHHHHhhcCCCC-------cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 0 00011111111111111 112566899999999988753 2246778888765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=151.39 Aligned_cols=222 Identities=17% Similarity=0.169 Sum_probs=155.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
...+|++|||||+|.||.++++.|.++ |++|++++|++.....+... ....+..+.+|++|.+++.++++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 340 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEA----LGDEHLSVQADITDEAAVESAFAQIQAR 340 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----hCCceeEEEccCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999 99999999987665544322 123567789999999988877753
Q ss_pred ---ccEEEEeccccCC--c---cccCChhHHHHHhhhhHHHHHHHHHhC--C-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTP--A---DYNTRPLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ---~d~Vih~a~~~~~--~---~~~~~~~~~~~~nv~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|++||+||.... . ...++....+++|+.++.++++++... + .++|++||...+....
T Consensus 341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 409 (520)
T PRK06484 341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP----------- 409 (520)
T ss_pred cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC-----------
Confidence 8999999997532 1 111234567889999999998877553 2 6899999975543211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+. |+++.++.|+.+..+.... .. .
T Consensus 410 ----------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---------~~-~ 457 (520)
T PRK06484 410 ----------------------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA---------LK-A 457 (520)
T ss_pred ----------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhh---------hc-c
Confidence 22379999999999998887554 7999999999998764320 00 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.-........+..+. ..+...+|+|++++.++.... ...|+.+.+.++
T Consensus 458 ~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 458 SGRADFDSIRRRIPL---------GRLGDPEEVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred ccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 000011112222111 124578999999999987532 246778888775
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.3e-16 Score=139.95 Aligned_cols=226 Identities=11% Similarity=0.085 Sum_probs=149.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|++|||||+|+||.++++.|+++ |++|+++++++.... ..++.++.+|++|++++.++++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~-G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLAN-GANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 999999998765432 2367889999999998887765
Q ss_pred --cccEEEEeccccCCcc-------------ccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccC
Q 016370 89 --MADLTINLAAICTPAD-------------YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIG 148 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~ 148 (390)
.+|+|||+||...... ..++....+++|+.++..+++++... + .++|++||...+....
T Consensus 75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 153 (266)
T PRK06171 75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE- 153 (266)
T ss_pred cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-
Confidence 3799999999753211 11233457789999999998877642 3 5799999975543211
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec-CCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI-GPRMDFIP 224 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~-G~~~~~~~ 224 (390)
....|+.+|...+.+++.++.+ .|+++.+++|+.+- .+.....
T Consensus 154 --------------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~- 200 (266)
T PRK06171 154 --------------------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPE- 200 (266)
T ss_pred --------------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChh-
Confidence 2236999999999999888755 48999999999874 2211100
Q ss_pred CCCCCCCCchh-hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 225 GIDGPSEGVPR-VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 225 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+......... -...+..........+ ...+...+|+|.++..++.... ...|+.+++.++
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 201 -YEEALAYTRGITVEQLRAGYTKTSTIP-------LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred -hhhhhccccCCCHHHHHhhhccccccc-------CCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 0000000000 0011111111100111 1235668999999999887532 245677877764
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.7e-16 Score=129.93 Aligned_cols=284 Identities=15% Similarity=0.106 Sum_probs=182.3
Q ss_pred CCCEEEEEcCchhHHHHHHH-----HHHhhCC----CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh
Q 016370 16 KPVTICMIGAGGFIGSHLCE-----KILLETP----HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~-----~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~ 86 (390)
++++.++-+++|+|+.+|.. ++-+. + |+|++++|.+.+. ++.+-+.|..-.
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~-~~a~~h~vtv~sR~pg~~-------------ritw~el~~~Gi------ 70 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNV-HSADNHAVTVLSRSPGKA-------------RITWPELDFPGI------ 70 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCC-CcccccceEEEecCCCCc-------------ccccchhcCCCC------
Confidence 44678888999999999988 55444 4 8999999988643 333333333221
Q ss_pred hccccEEEEeccccCC---cccc-CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 87 IKMADLTINLAAICTP---ADYN-TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 87 ~~~~d~Vih~a~~~~~---~~~~-~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
..+|++++++++.... .+|. .-..+.....+..|..|+++..... +.+|.+|..++|-++....++|+.+...
T Consensus 71 p~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg 150 (315)
T KOG3019|consen 71 PISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG 150 (315)
T ss_pred ceehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC
Confidence 1246666666665431 1121 1112223334455788888888776 6899999999999988777777776531
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
.--.+.++.|-.-.......+++++++|.|.+.|.+.+- +..++
T Consensus 151 ------------------------fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa----------~~~M~-- 194 (315)
T KOG3019|consen 151 ------------------------FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGA----------LAMMI-- 194 (315)
T ss_pred ------------------------hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcc----------hhhhh--
Confidence 122334444433322223336899999999999998651 11111
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+.-++-.|+|+ |+|++.+.|||++|++..+..+++++. ..++.|-..+ ++++..|+++.+.++++++.-.. +|
T Consensus 195 lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~li~~ale~~~--v~GViNgvAP-~~~~n~Ef~q~lg~aL~Rp~~~p-vP 267 (315)
T KOG3019|consen 195 LPFQMGAGGPL---GSGQQWFPWIHVDDLVNLIYEALENPS--VKGVINGVAP-NPVRNGEFCQQLGSALSRPSWLP-VP 267 (315)
T ss_pred hhhhhccCCcC---CCCCeeeeeeehHHHHHHHHHHHhcCC--CCceecccCC-CccchHHHHHHHHHHhCCCcccC-Cc
Confidence 12244557765 899999999999999999999999975 5679999998 79999999999999999765332 22
Q ss_pred CCcccCCcccccC-CCCC--CCCCCcCcHHHHHHhcCccccc-CHHHHHHHHH
Q 016370 320 EPTVDVSSKEFYG-EGYD--DSDKRIPDMTIINQQLGWNPKT-SLWDLLESTL 368 (390)
Q Consensus 320 ~~~~~~~~~~~~~-~~~~--~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~ 368 (390)
+......++ ++.. ..... .-..|+ .++||+.++ .+.+++++.+
T Consensus 268 ----~fvvqA~fG~erA~~vLeGqK-V~Pqra-l~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 268 ----DFVVQALFGPERATVVLEGQK-VLPQRA-LELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred ----HHHHHHHhCccceeEEeeCCc-ccchhH-hhcCceeechHHHHHHHHHh
Confidence 111112222 1110 11112 223445 468999888 4677776643
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=138.63 Aligned_cols=169 Identities=15% Similarity=0.178 Sum_probs=120.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-------A 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-------~ 90 (390)
|+++||||+|.||.++++.|.++ |++|++++|+++................+.++.+|+.|.+.+.+++.. +
T Consensus 1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999998 999999999776543332111111112355678999998887766653 7
Q ss_pred cEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----h-C-CCcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----E-N-NKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~-~-~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|+|||++|...... ..++....+++|+.++..+++++. + . +.++|++||...+... +
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---------~---- 146 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---------P---- 146 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---------C----
Confidence 99999998753222 122345678899999999998863 2 2 2689999996432111 0
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCC
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~ 220 (390)
....|+.+|...+.+.+.+. ...++++++++||.+.++..
T Consensus 147 --------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~ 189 (272)
T PRK07832 147 --------------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV 189 (272)
T ss_pred --------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence 12369999998887776655 34589999999999988753
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=140.64 Aligned_cols=218 Identities=14% Similarity=0.130 Sum_probs=144.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|++|||||+|+||.+++++|.++ |++|++.++... ........... ...++.++.+|+.|.+.+.++++
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999887542 22221111100 13467889999999988887765
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC-----------C-CcEEEeecccccccccCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN-----------N-KRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----------~-~~~v~~Ss~~vy~~~~~~~ 150 (390)
.+|+|||+||...... ...+....+++|+.++.++++++... . .++|++||...+....
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 163 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV--- 163 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC---
Confidence 4899999999875321 12344567789999999998876421 1 4899999865432210
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCC
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
....|+.+|...+.+.+.++.+ +|+++.++.|+. ...
T Consensus 164 ------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~-------- 203 (306)
T PRK07792 164 ------------------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTA-------- 203 (306)
T ss_pred ------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCc--------
Confidence 1226999999999998887654 578888888862 110
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+...+. ...+ ... ....+.+..+|++.++..++.... ...|++|.+.++
T Consensus 204 --------~~~~~~----~~~~-~~~---~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 204 --------MTADVF----GDAP-DVE---AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred --------hhhhhc----cccc-hhh---hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence 100000 0000 000 011234579999999998886532 246777877764
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=9e-16 Score=135.06 Aligned_cols=163 Identities=14% Similarity=0.166 Sum_probs=124.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----ccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-----MAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-----~~d 91 (390)
|++++||||+|+||++++++|+++ |++|++++|++...+.+.. .+++++.+|+++.+.+..++. .+|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 568999999999999999999998 9999999998765544332 246789999999998888642 389
Q ss_pred EEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecc-cccccccCCCCCCCCCCCCC
Q 016370 92 LTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTC-EVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 92 ~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~-~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|||+++...... ..++....++.|+.++.++++++... +.++|++||. .+++....
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------ 140 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG------------ 140 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC------------
Confidence 9999999863211 23345678889999999999888642 2578898885 34432110
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCC
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGP 218 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~ 218 (390)
.+.+.|+.+|...+.+++.++.++ +++++.++|+.+..+
T Consensus 141 -------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 141 -------------------TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred -------------------CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 012359999999999999887655 788999999988665
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-15 Score=135.88 Aligned_cols=218 Identities=17% Similarity=0.177 Sum_probs=140.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHH----HHhh-----
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRL----EGLI----- 87 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~----~~~~----- 87 (390)
..++||||+|+||.++++.|+++ |++|+++.|+. +....+...........+.++.+|++|.+.+ ..++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE-GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 47999999999999999999998 99999987653 3333222111111123566789999998644 3333
Q ss_pred --ccccEEEEeccccCCccccC---------------ChhHHHHHhhhhHHHHHHHHHhCC-----------CcEEEeec
Q 016370 88 --KMADLTINLAAICTPADYNT---------------RPLDTIYSNFIDALPVVKYCSENN-----------KRLIHFST 139 (390)
Q Consensus 88 --~~~d~Vih~a~~~~~~~~~~---------------~~~~~~~~nv~~~~~l~~~~~~~~-----------~~~v~~Ss 139 (390)
.++|+|||+||...+..... +....+++|+.++..+++++.... .++|++||
T Consensus 81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s 160 (267)
T TIGR02685 81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD 160 (267)
T ss_pred ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence 24899999999754321111 133568899999988887653221 35677766
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec
Q 016370 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI 216 (390)
Q Consensus 140 ~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 216 (390)
...... . .+...|+.+|...+.+.+.++.+ .|+++++++|+.+.
T Consensus 161 ~~~~~~-----------~----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~ 207 (267)
T TIGR02685 161 AMTDQP-----------L----------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL 207 (267)
T ss_pred hhccCC-----------C----------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence 432111 0 12347999999999999988666 58999999999987
Q ss_pred CCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 217 GPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 217 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.|... . ...........++ + ..+...+|++++++.++.... ...|+.+.+.++
T Consensus 208 ~~~~~------------~---~~~~~~~~~~~~~-----~---~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg 261 (267)
T TIGR02685 208 LPDAM------------P---FEVQEDYRRKVPL-----G---QREASAEQIADVVIFLVSPKAKYITGTCIKVDGG 261 (267)
T ss_pred Ccccc------------c---hhHHHHHHHhCCC-----C---cCCCCHHHHHHHHHHHhCcccCCcccceEEECCc
Confidence 65321 0 0111111111111 0 124578999999999987642 246777888775
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-15 Score=134.18 Aligned_cols=222 Identities=13% Similarity=0.112 Sum_probs=149.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---cc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---AD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~d 91 (390)
+.+|+++||||+|.||.++++.|.++ |++|++++|++.....+..........++.++.+|++|.+++..+++. +|
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 56789999999999999999999998 999999999876554432221111234678899999999988887763 99
Q ss_pred EEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 92 LTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
++||++|........ ++....+++|+.+...+++++ ++.+ .++|++||..-....
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~---------------- 147 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPD---------------- 147 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCC----------------
Confidence 999999975322111 233456778999988777765 3443 689999885321100
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH-
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA- 238 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~- 238 (390)
.....|+.+|...+.+.+.++. ..|+++..+.||.+..+... .++.
T Consensus 148 -----------------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~-------------~~~~~ 197 (259)
T PRK06125 148 -----------------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML-------------TLLKG 197 (259)
T ss_pred -----------------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH-------------HHHHh
Confidence 0223689999999988887754 34899999999888665211 0000
Q ss_pred ---------HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 239 ---------CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 239 ---------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..........| ..-+..++|+|++++.++.... ...|..+.+.++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg 252 (259)
T PRK06125 198 RARAELGDESRWQELLAGLP---------LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252 (259)
T ss_pred hhhcccCCHHHHHHHhccCC---------cCCCcCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence 00001111111 1125678999999999886532 245677777765
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.4e-15 Score=133.32 Aligned_cols=228 Identities=11% Similarity=0.075 Sum_probs=143.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|+||||||+|.||+.++++|.++ |++|++++|++............ ...+.++.+|++|.++++++++ .+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKE--YGEVYAVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHh--cCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999999999999 99999999987654433221111 1357889999999998887775 38
Q ss_pred cEEEEeccccCCc---ccc---CChhHHHHHhhhhHHHHH----HHHH-hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 91 DLTINLAAICTPA---DYN---TRPLDTIYSNFIDALPVV----KYCS-ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 91 d~Vih~a~~~~~~---~~~---~~~~~~~~~nv~~~~~l~----~~~~-~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
|+|||+||..... ... .+....+.+|+.++..+. ..+. +.+ .++|++||...+...
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~------------ 145 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM------------ 145 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC------------
Confidence 9999999975311 111 122234556776654443 3332 233 789999997653221
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCC-CCch
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPS-EGVP 234 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~-~~~~ 234 (390)
.+...|+.+|...+.+.+.++.++ |+++..+.||.+-.|....... ..+. ...
T Consensus 146 ---------------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~-~~~~~~~~- 202 (259)
T PRK08340 146 ---------------------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLA-RIAEERGV- 202 (259)
T ss_pred ---------------------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHH-hhhhccCC-
Confidence 022379999999999999887654 6889999998876553210000 0000 000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..-...........| ..-+...+|+|+++..++.... ...|++..+.++
T Consensus 203 ~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg 252 (259)
T PRK08340 203 SFEETWEREVLERTP---------LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGA 252 (259)
T ss_pred chHHHHHHHHhccCC---------ccCCCCHHHHHHHHHHHcCcccccccCceEeecCC
Confidence 000000011111111 1125678999999999987542 246677777775
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=154.04 Aligned_cols=201 Identities=14% Similarity=0.155 Sum_probs=147.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
..+++|+++||||+|+||.++++.|.++ |++|++++|+++....+...... ...++.++.+|+.|.+++.++++
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567889999999999999999999999 99999999987655443221111 12468889999999999888776
Q ss_pred ---cccEEEEeccccCCcc---c---cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD---Y---NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~---~---~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|+|||+||...... . ..+....+++|+.++.+++.++ ++.+ .++|++||...|....
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 517 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP------- 517 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------
Confidence 4899999999753211 1 1234567889999988776654 4455 7999999987765421
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
..+.|+.+|...+.+.+.++.+ .++++++++|+.+..+....
T Consensus 518 --------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~--------- 562 (657)
T PRK07201 518 --------------------------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP--------- 562 (657)
T ss_pred --------------------------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc---------
Confidence 1236999999999999887654 48999999999997764320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
. .. .. ....+..+++|+.++..+...
T Consensus 563 ----~-----------~~---~~----~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 563 ----T-----------KR---YN----NVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred ----c-----------cc---cc----CCCCCCHHHHHHHHHHHHHhC
Confidence 0 00 00 112467999999999988754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-14 Score=131.09 Aligned_cols=219 Identities=18% Similarity=0.205 Sum_probs=143.7
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCC-----------hhhhccccccccCCCCCeeEEeCCCCCh
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYN-----------DKIKHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
++.+|+||||||+| .||.+++++|+++ |++|+++.|.. .....+.... ......+.++.+|++|.
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~-G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~D~~~~ 80 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEA-GADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL-LKNGVKVSSMELDLTQN 80 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHC-CCeEEEEecccccccccccccHHHHHHHHHHH-HhcCCeEEEEEcCCCCH
Confidence 56789999999995 7999999999999 99998875421 1111111100 01134678899999999
Q ss_pred hHHHHhhcc-------ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccc
Q 016370 81 SRLEGLIKM-------ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYG 144 (390)
Q Consensus 81 ~~~~~~~~~-------~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~ 144 (390)
+++.+++.. +|+|||+||....... .++....+++|+.+...+..+ +++.+ .++|++||.....
T Consensus 81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (256)
T PRK12859 81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence 988877752 7999999997643211 123445678899988777543 33333 6999999965421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~ 221 (390)
.. .+...|+.+|...+.+.+.++.+ .+++++.++|+.+-.+...
T Consensus 161 ~~---------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~ 207 (256)
T PRK12859 161 PM---------------------------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT 207 (256)
T ss_pred CC---------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC
Confidence 11 02347999999999998887654 4799999999988654321
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 222 FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ....+....++ ..+...+|+|+++..++.... ...|+.+.+.++
T Consensus 208 -------------~~---~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 208 -------------EE---IKQGLLPMFPF---------GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred -------------HH---HHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 11 11111111111 123458999999999886532 235667766654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-15 Score=134.54 Aligned_cols=242 Identities=12% Similarity=0.108 Sum_probs=148.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------ccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------MAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------~~d 91 (390)
|.++|||| |.||+++++.|. + |++|++++|++............ ....+.++.+|++|.+++..+++ .+|
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~-G~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-A-GKKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 57899998 689999999995 6 99999999987554433221111 12367889999999998887775 389
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
+|||+||... ...++...+++|+.++.++++++... +.++|++||........ ...+..+... .+..
T Consensus 79 ~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~--~~~~~~~~~~-----~~~~ 148 (275)
T PRK06940 79 GLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPA--LTAEQERALA-----TTPT 148 (275)
T ss_pred EEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcc--cchhhhcccc-----cccc
Confidence 9999999753 23457788999999999999877543 24567777754322110 0000000000 0000
Q ss_pred CCCCcccC---C--CCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 169 DASPCIFG---S--IEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 169 ~~~~~~~~---~--~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
.+...+. + ...+...|+.+|...+.+.+.++.+ .|+++..+.||.+..+... ......-...
T Consensus 149 -~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~---------~~~~~~~~~~ 218 (275)
T PRK06940 149 -EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQ---------DELNGPRGDG 218 (275)
T ss_pred -ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccch---------hhhcCCchHH
Confidence 0000000 0 0012347999999999888877554 4799999999998776421 0000000011
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
...+....|. .-+...+|+|+++..++... ....|+.+.+.++
T Consensus 219 ~~~~~~~~p~---------~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg 262 (275)
T PRK06940 219 YRNMFAKSPA---------GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262 (275)
T ss_pred HHHHhhhCCc---------ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence 1122211111 12567899999999988643 3346778888775
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-14 Score=130.61 Aligned_cols=220 Identities=10% Similarity=0.024 Sum_probs=147.7
Q ss_pred CCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
+++|+++||||+ +-||..++++|.++ |++|++.+|+......+.+. ....+.++.+|++|.++++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKL----VDEEDLLVECDVASDESIERAFATIKE 79 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhh----ccCceeEEeCCCCCHHHHHHHHHHHHH
Confidence 567899999999 79999999999998 99999998874322222111 12357889999999988877664
Q ss_pred ---cccEEEEeccccCCc-----c---ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTPA-----D---YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~-----~---~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||..... . ..++....+++|+.+...+++++... +.++|++||.......
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-------- 151 (252)
T PRK06079 80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI-------- 151 (252)
T ss_pred HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC--------
Confidence 389999999975321 1 11233456778999988887766543 2689999985422110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+....
T Consensus 152 -------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~--------- 197 (252)
T PRK06079 152 -------------------------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG--------- 197 (252)
T ss_pred -------------------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc---------
Confidence 01236999999999999888765 47999999999987653210
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... -...........|. ..+...+|+|+++..++... ....|+++.+.++
T Consensus 198 -~~~-~~~~~~~~~~~~p~---------~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 198 -IKG-HKDLLKESDSRTVD---------GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred -CCC-hHHHHHHHHhcCcc---------cCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 000 01112222222111 12566899999999998753 2345677777664
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=136.41 Aligned_cols=225 Identities=15% Similarity=0.090 Sum_probs=149.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++++++||||+|+||.+++++|+++ |++|++++|+.+....+... ....+..+.+|+.|.+++.++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEAA----HGDAVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhh----cCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999 99999999987655443321 12467889999999887777665
Q ss_pred -cccEEEEeccccCCc----ccc-----CChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCC
Q 016370 89 -MADLTINLAAICTPA----DYN-----TRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~----~~~-----~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||..... ... .+....+++|+.++..+++++... +.++|++||...+....
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 150 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG------- 150 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC-------
Confidence 379999999864211 111 123457789999999998888543 25788888864332110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+. .+++..+.||.+..+..... ...
T Consensus 151 --------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~------~~~ 198 (262)
T TIGR03325 151 --------------------------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPK------SLG 198 (262)
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCcccc------ccc
Confidence 12269999999999999988765 38899999999876642200 000
Q ss_pred c-hhhHHH--HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEecCC
Q 016370 233 V-PRVLAC--FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVGNP 292 (390)
Q Consensus 233 ~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~~~ 292 (390)
. ...... .........| ..-+...+|+|+++..++.... ...|+++.+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 199 MADKSISTVPLGDMLKSVLP---------IGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred cccccccccchhhhhhhcCC---------CCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 0 000000 0000111111 1125568999999998887532 236677777764
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.5e-15 Score=130.05 Aligned_cols=197 Identities=16% Similarity=0.183 Sum_probs=142.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----cccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----MADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----~~d~V 93 (390)
||++||||+|.||+++++.|.++ |++|++++|+.+........ .+++++.+|+.|.+++.++++ .+|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKE------LDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh------ccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 57999999999999999999998 99999999987655433221 146788999999999988876 48999
Q ss_pred EEeccccC----Cc-----cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 94 INLAAICT----PA-----DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 94 ih~a~~~~----~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
||+|+... +. +..++....+++|+.++..+++++... +.++|++||... +
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------------~----- 135 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------------P----- 135 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-------------C-----
Confidence 99997421 10 012344567789999999988877542 268999998530 0
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+ .|+++..+.||.+..+...
T Consensus 136 -------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~----------------- 179 (223)
T PRK05884 136 -------------------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD----------------- 179 (223)
T ss_pred -------------------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh-----------------
Confidence 1236999999999999887664 4799999999887543210
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. ...| .-..+|+++++..++... ....|+++.+.++
T Consensus 180 ----~~-~~~p------------~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg 217 (223)
T PRK05884 180 ----GL-SRTP------------PPVAAEIARLALFLTTPAARHITGQTLHVSHG 217 (223)
T ss_pred ----hc-cCCC------------CCCHHHHHHHHHHHcCchhhccCCcEEEeCCC
Confidence 00 0011 116899999999988753 2346677777765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.5e-15 Score=128.28 Aligned_cols=187 Identities=16% Similarity=0.171 Sum_probs=135.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~d~Vi 94 (390)
|+++||||+|.||.++++.|.++ ++|++++|+.. .+.+|+.|.++++++++ ++|+||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~--~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR--HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc--CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999987 89999988642 35789999999988877 489999
Q ss_pred EeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 95 NLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 95 h~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
|+||....... .++....+++|+.++.++++++... +.+++++||.......
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~--------------------- 119 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI--------------------- 119 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC---------------------
Confidence 99997543211 2234456778999999999887643 2679999885422111
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh--cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE--NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
.....|+.+|...+.+.+.++.+ .|+++..+.|+.+-.+... .
T Consensus 120 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~------------------~----- 164 (199)
T PRK07578 120 ------------PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK------------------Y----- 164 (199)
T ss_pred ------------CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh------------------h-----
Confidence 02236999999999998887664 4899999999877432110 0
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEec
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~ 290 (390)
+.. +.+ ..++..+|+|+++..++... ..+++|+++
T Consensus 165 -~~~--~~~-----~~~~~~~~~a~~~~~~~~~~--~~g~~~~~~ 199 (199)
T PRK07578 165 -GPF--FPG-----FEPVPAARVALAYVRSVEGA--QTGEVYKVG 199 (199)
T ss_pred -hhc--CCC-----CCCCCHHHHHHHHHHHhccc--eeeEEeccC
Confidence 000 111 13578999999999999865 467888764
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-14 Score=114.99 Aligned_cols=209 Identities=21% Similarity=0.186 Sum_probs=145.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||.|+||||.+|++|+++++++ ||+|+++.|++++...+ +++..++.|+.|.+.+.+.+.+.|+||..-
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~ 70 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLAGHDAVISAF 70 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhcCCceEEEec
Confidence 79999999999999999999999 99999999999877643 478899999999999999999999999877
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+...+ ++.. .-......|++..+..+ .|++.++.++----..+..+ .+.|.-
T Consensus 71 ~~~~~-----~~~~---~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rL-vD~p~f------------------ 123 (211)
T COG2910 71 GAGAS-----DNDE---LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRL-VDTPDF------------------ 123 (211)
T ss_pred cCCCC-----ChhH---HHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCcee-ecCCCC------------------
Confidence 64421 1111 12333677888889988 89998887533221111111 111111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
|.-.|..++..+| .+..+.++.+++||-+-|+.++-|+.. .+ ...-++...+.+
T Consensus 124 ----P~ey~~~A~~~ae-~L~~Lr~~~~l~WTfvSPaa~f~PGer---------Tg----------~yrlggD~ll~n-- 177 (211)
T COG2910 124 ----PAEYKPEALAQAE-FLDSLRAEKSLDWTFVSPAAFFEPGER---------TG----------NYRLGGDQLLVN-- 177 (211)
T ss_pred ----chhHHHHHHHHHH-HHHHHhhccCcceEEeCcHHhcCCccc---------cC----------ceEeccceEEEc--
Confidence 2224667777766 334444455699999999999999765 11 111233333332
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEec
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~ 290 (390)
...-++|...|.|-+++..++++. ...+.|.+.
T Consensus 178 ~~G~SrIS~aDYAiA~lDe~E~~~-h~rqRftv~ 210 (211)
T COG2910 178 AKGESRISYADYAIAVLDELEKPQ-HIRQRFTVA 210 (211)
T ss_pred CCCceeeeHHHHHHHHHHHHhccc-ccceeeeec
Confidence 223478999999999999999986 355666553
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.6e-15 Score=150.10 Aligned_cols=172 Identities=16% Similarity=0.178 Sum_probs=129.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
..++++++|||||+|+||++++++|.++ |++|++++|+.+....+...... ....+.++.+|++|.+++.+++..
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567789999999999999999999998 99999999987655433221111 124678999999999988887763
Q ss_pred ----ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|+|||+||....... .++....+++|+.++.++++++. +.+ .++|++||...|....
T Consensus 389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 460 (582)
T PRK05855 389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-------- 460 (582)
T ss_pred hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC--------
Confidence 7999999998643222 22344567799999988887653 333 5899999987765431
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
....|+.+|...+.+.+.++.+ .|++++++.||.+-.+.
T Consensus 461 -------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 461 -------------------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred -------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 2237999999999888776543 48999999999886553
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=131.61 Aligned_cols=219 Identities=14% Similarity=0.145 Sum_probs=145.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC---------hhhhccccccccCCCCCeeEEeCCCCChhHHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN---------DKIKHLLEPESQTGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~ 84 (390)
.++++++|||||++.||.++++.|.++ |++|++++++. +........... ....+.++.+|++|.+++.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~ 80 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWDGAA 80 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHHHHH
Confidence 356789999999999999999999998 99999988764 222222111100 1235778899999988887
Q ss_pred Hhhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hC---C----CcEEEeecccc
Q 016370 85 GLIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----EN---N----KRLIHFSTCEV 142 (390)
Q Consensus 85 ~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~---~----~~~v~~Ss~~v 142 (390)
++++ .+|++||+||...... ..++....+++|+.++..+++++. +. + .++|++||...
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 160 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG 160 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence 7664 3799999999764221 123445678899999888877653 21 1 48999998643
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 143 y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
+.... ....|+.+|...+.+.+.++.+ .|+++..+.|+ +..+.
T Consensus 161 ~~~~~---------------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~ 206 (286)
T PRK07791 161 LQGSV---------------------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM 206 (286)
T ss_pred CcCCC---------------------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc
Confidence 22110 1236999999999998887655 58999999997 32211
Q ss_pred CCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 220 MDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............+ .....+...+|+|++++.++.... ...|+.+.+.++
T Consensus 207 -----------------~~~~~~~~~~~~~-------~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 256 (286)
T PRK07791 207 -----------------TETVFAEMMAKPE-------EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG 256 (286)
T ss_pred -----------------chhhHHHHHhcCc-------ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence 1111111111111 111235679999999999886532 246777888775
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-14 Score=129.14 Aligned_cols=222 Identities=9% Similarity=0.055 Sum_probs=144.4
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChh---hhccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDK---IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.+.+|+++||||+ +-||.++++.|.++ |++|++++|+... ...+.... ...++.++.+|+.|.++++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAGERLEKEVRELADTL---EGQESLLLPCDVTSDEEITACFE 79 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCcccchHHHHHHHHHc---CCCceEEEecCCCCHHHHHHHHH
Confidence 3567899999997 89999999999999 9999998775322 22221110 12467789999999998887775
Q ss_pred -------cccEEEEeccccCC----cc-cc---CChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCC
Q 016370 89 -------MADLTINLAAICTP----AD-YN---TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~----~~-~~---~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~ 150 (390)
.+|++||+||.... .. .. +.....+++|+.+...+++++... +.++|++||....-..
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---- 155 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV---- 155 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC----
Confidence 28999999987531 11 11 122345678888887777665432 2589999986432110
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCC
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
+ ....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+....
T Consensus 156 -----~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~----- 201 (257)
T PRK08594 156 -----Q------------------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG----- 201 (257)
T ss_pred -----C------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh-----
Confidence 0 1236999999999999888754 37999999998886652110
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...+ ...........| ...+...+|+|++++.++.... ...|+.+.+.++
T Consensus 202 -----~~~~-~~~~~~~~~~~p---------~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 202 -----VGGF-NSILKEIEERAP---------LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred -----hccc-cHHHHHHhhcCC---------ccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 0000 001111111111 1124668999999999887532 245677777664
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.7e-15 Score=130.80 Aligned_cols=165 Identities=18% Similarity=0.129 Sum_probs=119.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----ccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-----MAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-----~~d 91 (390)
|++|+||||+|+||++++++|.++ |++|++++|++.....+.. ..++.++.+|+.|.+++.++++ ++|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQA------LPGVHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHh------ccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 478999999999999999999998 9999999998765443322 1367788999999988877776 389
Q ss_pred EEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHHhC---C-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCSEN---N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~---~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+|||+||...... ...+....+.+|+.++..+++++... + .+++++||. ++..... +.
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~------~~---- 141 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELP------DG---- 141 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccC------CC----
Confidence 9999998864311 11233345667999988888877533 2 567888774 2221100 00
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
.+...|+.+|...+.+++.++.+ .++++..++||.+-.+
T Consensus 142 ------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 142 ------------------GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred ------------------CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 01226999999999999988655 4689999999988654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-14 Score=128.55 Aligned_cols=222 Identities=9% Similarity=0.054 Sum_probs=145.1
Q ss_pred CCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
|++|.+|||||++ -||..++++|.++ |++|++.+|+........+.... . .....+.+|++|.++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~-~-g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAES-L-GSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHh-c-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 5678999999997 9999999999999 99999998865322211111000 1 123468899999998887765
Q ss_pred ---cccEEEEeccccCCc--------cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTPA--------DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||..... ...++....+++|+.++.++++++... +.++|++||.......
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~-------- 153 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM-------- 153 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC--------
Confidence 389999999975321 111234456778999988887765432 2589999986432110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
| ....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+....
T Consensus 154 -~------------------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~--------- 199 (271)
T PRK06505 154 -P------------------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG--------- 199 (271)
T ss_pred -C------------------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc---------
Confidence 0 1236999999999999888765 47999999999887653210
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ............|+ .-+...+|+|++++.++.... ...++.+.+.++
T Consensus 200 -~~~-~~~~~~~~~~~~p~---------~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG 250 (271)
T PRK06505 200 -IGD-ARAIFSYQQRNSPL---------RRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG 250 (271)
T ss_pred -Ccc-hHHHHHHHhhcCCc---------cccCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence 000 00111111111121 124568999999999987532 235677888775
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-13 Score=123.24 Aligned_cols=111 Identities=12% Similarity=0.116 Sum_probs=84.8
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
...+++++++||||+|.||+++++.|+++ |++|++++|+......... ......+.+|++|.+++.+.+.++|
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~iD 81 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESND------ESPNEWIKWECGKEESLDKQLASLD 81 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhc------cCCCeEEEeeCCCHHHHHHhcCCCC
Confidence 34566789999999999999999999999 9999999987622111100 1123578899999999999988899
Q ss_pred EEEEeccccCCcc-ccCChhHHHHHhhhhHHHHHHHHHh
Q 016370 92 LTINLAAICTPAD-YNTRPLDTIYSNFIDALPVVKYCSE 129 (390)
Q Consensus 92 ~Vih~a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~ 129 (390)
++||+||...... ..++....+++|+.++.++++++..
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 82 VLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred EEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999753222 2345667888999999999887643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.7e-14 Score=127.73 Aligned_cols=223 Identities=12% Similarity=0.100 Sum_probs=146.4
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
++++|++|||||+ +-||.+++++|.++ |++|++++|+....+.+.+.... ...+.++.+|++|.+++.++++
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKARPYVEPLAEE--LDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHHHh--hccceEEecCcCCHHHHHHHHHHHH
Confidence 3567899999998 59999999999999 99999998875432111111000 1234578999999988877764
Q ss_pred ----cccEEEEeccccCCc--------cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPA--------DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|++||+||..... ...++....+++|+.++..+++++... +.++|++||.......
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~------- 156 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV------- 156 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC-------
Confidence 379999999975321 111234567789999998888866432 2589999985321100
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
+ ..+.|+.+|...+.+.+.++.+ .|+++..+.|+.+-.+....
T Consensus 157 --~------------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~-------- 202 (258)
T PRK07533 157 --E------------------------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG-------- 202 (258)
T ss_pred --c------------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc--------
Confidence 0 1236999999999988887654 47999999999886553210
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... ............|. ..+...+|+|++++.++... ....|+.+.+.++
T Consensus 203 --~~~-~~~~~~~~~~~~p~---------~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 203 --IDD-FDALLEDAAERAPL---------RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred --cCC-cHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 000 01111222222111 12567899999999998753 2346677777664
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.1e-14 Score=127.63 Aligned_cols=223 Identities=12% Similarity=0.090 Sum_probs=143.4
Q ss_pred CCCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++||||| ++-||.++++.|.++ |++|++..|.......+.+.. ... .....+.+|+.|.+++++++.
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVDKLEERVRKMA-AEL-DSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHH-hcc-CCceEEECCCCCHHHHHHHHHHHH
Confidence 467889999997 679999999999999 999998876532222111111 001 234578999999999887775
Q ss_pred ----cccEEEEeccccCCc----c-cc----CChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCC
Q 016370 89 ----MADLTINLAAICTPA----D-YN----TRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~----~-~~----~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~ 151 (390)
.+|++||+||..... . .. +.....+++|+.+...+.+++.. .+.++|++||...+...
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~----- 154 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI----- 154 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC-----
Confidence 389999999986421 0 11 12233456788887777665432 22579999986432111
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
| ....|+.+|...+.+.+.++. .+|+++..+.||.+-.+...
T Consensus 155 ----~------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~------- 199 (261)
T PRK08690 155 ----P------------------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS------- 199 (261)
T ss_pred ----C------------------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh-------
Confidence 0 223699999999988887754 35899999999988655321
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.... .......+....|+ ..+...+|+|+++..++... ....|+.+-+.++
T Consensus 200 ---~~~~-~~~~~~~~~~~~p~---------~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG 251 (261)
T PRK08690 200 ---GIAD-FGKLLGHVAAHNPL---------RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGG 251 (261)
T ss_pred ---cCCc-hHHHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence 0000 01111112121121 12567999999999999853 2245677777765
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-14 Score=128.75 Aligned_cols=222 Identities=9% Similarity=0.042 Sum_probs=144.2
Q ss_pred CCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
|.+|++|||||+ +-||+.+++.|.++ |++|++.+|+....+.+...... .... ..+.+|++|.+++.++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~-~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQE-LGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHh-cCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 456899999997 79999999999999 99999998874211111111000 1122 578899999988877765
Q ss_pred ---cccEEEEeccccCC-----c---cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTP-----A---DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~-----~---~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||.... + ...++....+++|+.++..+.+++... +.++|++||..-....
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~-------- 151 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV-------- 151 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC--------
Confidence 37999999997531 1 111234457789999988887766432 2689999985421110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
| ....|+.+|...+.+.+.++.+ .|+++..+.||.+..+....
T Consensus 152 -~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~--------- 197 (274)
T PRK08415 152 -P------------------------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG--------- 197 (274)
T ss_pred -C------------------------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc---------
Confidence 0 1236999999999999888754 47999999999886642210
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.... ...........| ..-+...+|+|+++..++... ....|+.+.+.++
T Consensus 198 -~~~~-~~~~~~~~~~~p---------l~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG 248 (274)
T PRK08415 198 -IGDF-RMILKWNEINAP---------LKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248 (274)
T ss_pred -cchh-hHHhhhhhhhCc---------hhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence 0000 000000001111 112567899999999998753 2346777877775
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.5e-14 Score=126.70 Aligned_cols=222 Identities=11% Similarity=0.068 Sum_probs=143.4
Q ss_pred CCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
+++|+++||||++ -||+++++.|.++ |++|++.+|+........+.. . .......+.+|++|.+++++++.
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~~~~~~~~~~~-~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFA-A-QLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecchhHHHHHHHHH-h-ccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 5778999999986 8999999999999 999998888632111111110 0 01345678899999998887775
Q ss_pred ---cccEEEEeccccCCcc---------ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD---------YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|++||+||...... ..+.....+++|+.+...+.+++... +.++|++||.......
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~------- 153 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------- 153 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCC-------
Confidence 2799999999753211 11122345678988887777765432 2679999986431110
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
+ ....|+.+|...+.+.+.++.+ .++++.++-||.+--+...
T Consensus 154 --~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~--------- 198 (262)
T PRK07984 154 --P------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS--------- 198 (262)
T ss_pred --C------------------------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh---------
Confidence 0 1226999999999999988765 4799999999887543211
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.... ............|. .-+...+|++++++.++... ....++.+.+.++
T Consensus 199 -~~~~-~~~~~~~~~~~~p~---------~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 199 -GIKD-FRKMLAHCEAVTPI---------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred -cCCc-hHHHHHHHHHcCCC---------cCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 0000 01111111111111 12567899999999998753 2245677777765
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.8e-14 Score=126.10 Aligned_cols=223 Identities=11% Similarity=0.021 Sum_probs=144.3
Q ss_pred CCCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+.+|++||||| ++-||.+++++|.++ |++|+++.|.....+.+...... . .....+.+|++|++++.++++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAE-F-GSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEccchHHHHHHHHHHHh-c-CCcceeeccCCCHHHHHHHHHHHH
Confidence 467789999996 679999999999998 99999886542211111111000 1 123468899999998887775
Q ss_pred ----cccEEEEeccccCCc---------cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCC
Q 016370 89 ----MADLTINLAAICTPA---------DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
.+|++||+||..... ...++....+++|+.++..+++++... +.++|++||....-..
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~------ 153 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV------ 153 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC------
Confidence 389999999976321 011233456788999988887766442 1689999986431110
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
+ ....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+....
T Consensus 154 ---~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~------- 199 (260)
T PRK06997 154 ---P------------------------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG------- 199 (260)
T ss_pred ---C------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-------
Confidence 0 1236999999999999887754 47999999999886542110
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... .......+....|. .-+...+|+|+++..++... ....++++.+.++
T Consensus 200 ---~~~-~~~~~~~~~~~~p~---------~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 200 ---IKD-FGKILDFVESNAPL---------RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred ---ccc-hhhHHHHHHhcCcc---------cccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence 000 01111111111111 12567899999999998753 2346677877764
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.8e-14 Score=126.93 Aligned_cols=223 Identities=8% Similarity=0.042 Sum_probs=145.8
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.|++|++|||||+ +-||.++++.|.++ |++|+++.|+....+.+...... . .....+.+|++|.++++++++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAE-L-GAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHh-c-CCceEEecCCCCHHHHHHHHHHHH
Confidence 3467899999997 89999999999999 99999887753211111111000 1 234568999999998887765
Q ss_pred ----cccEEEEeccccCCc--------cccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPA--------DYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|++||+||..... ...++....+++|+.++..+++++... +.++|++||.......
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~------- 156 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM------- 156 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC-------
Confidence 289999999976321 111234567789999999988876543 2689999985422110
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
| ....|+.+|...+.+.+.++.+ .++++.++.||.+..+....
T Consensus 157 --p------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-------- 202 (272)
T PRK08159 157 --P------------------------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG-------- 202 (272)
T ss_pred --C------------------------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc--------
Confidence 0 1236999999999998887655 47999999999886542110
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... ...........|+ ..+...+|+|++++.++.... ...|+.+.+.++
T Consensus 203 --~~~~-~~~~~~~~~~~p~---------~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG 253 (272)
T PRK08159 203 --IGDF-RYILKWNEYNAPL---------RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG 253 (272)
T ss_pred --CCcc-hHHHHHHHhCCcc---------cccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence 0000 0000000111111 124678999999999987532 346778888875
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.4e-14 Score=125.90 Aligned_cols=223 Identities=9% Similarity=0.017 Sum_probs=144.2
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+.+|.++||||++ -||.++++.|.++ |++|++.+|+......+.+.. ... ....++.+|++|+++++++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~~~~~~~~~l~-~~~-g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSEVLEKRVKPLA-EEI-GCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCchHHHHHHHHHH-Hhc-CCceEEEccCCCHHHHHHHHHHHH
Confidence 46778999999997 7999999999998 999999887642111111110 001 122357899999998887775
Q ss_pred ----cccEEEEeccccCC-----cc---ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTP-----AD---YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~-----~~---~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|++||+|+.... .. ..++....+++|+.+...+++++... +.++|++||.......
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------- 154 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI------- 154 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC-------
Confidence 28999999987531 11 11234456778999988887765322 2689999985432110
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
| ....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+....
T Consensus 155 --~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-------- 200 (260)
T PRK06603 155 --P------------------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-------- 200 (260)
T ss_pred --C------------------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc--------
Confidence 0 1236999999999988887754 47999999999886553210
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... ...........|. ..+...+|+|+++..++.... ...++.+.+.++
T Consensus 201 --~~~~-~~~~~~~~~~~p~---------~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 201 --IGDF-STMLKSHAATAPL---------KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred --CCCc-HHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 0000 1111122222121 124668999999999997532 235677777664
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-14 Score=129.73 Aligned_cols=167 Identities=14% Similarity=0.096 Sum_probs=118.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhh---CCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 19 TICMIGAGGFIGSHLCEKILLE---TPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~---~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
.+|||||+|.||.+++++|.++ .|++|++++|+.+....+...... .....+.++.+|+.+.++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 5899999999999999999972 389999999987654443221111 0123678899999999988877653
Q ss_pred ------ccEEEEeccccCCc--cc-----cCChhHHHHHhhhhHHHHHHHHH----hC-C--CcEEEeecccccccccCC
Q 016370 90 ------ADLTINLAAICTPA--DY-----NTRPLDTIYSNFIDALPVVKYCS----EN-N--KRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 90 ------~d~Vih~a~~~~~~--~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~-~--~~~v~~Ss~~vy~~~~~~ 149 (390)
.|+|||+||..... .. .++....+++|+.++..+.+++. +. + .++|++||...+....
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~-- 159 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK-- 159 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC--
Confidence 25999999975321 11 12334678899999877766543 22 2 5799999975432210
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
....|+.+|...+.+.+.++.+ .++.+..+.||.+-.+
T Consensus 160 -------------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 160 -------------------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred -------------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 2236999999999999887655 4789999999888554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-13 Score=126.89 Aligned_cols=192 Identities=12% Similarity=0.047 Sum_probs=123.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+++++||||++.||.++++.|.++ | ++|++++|+......+...... ....+.++.+|++|.+++++++.
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~-G~~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT-GEWHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 568999999999999999999998 9 9999999987654433221110 12457788999999988876664
Q ss_pred cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHH----HhC--C-CcEEEeecccccccccCC----CCC
Q 016370 89 MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYC----SEN--N-KRLIHFSTCEVYGKTIGS----FLP 152 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~--~-~~~v~~Ss~~vy~~~~~~----~~~ 152 (390)
.+|++||+||...+.. ..+.....+++|+.++..++.++ ++. + .++|++||...+...... +.+
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~ 160 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN 160 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence 3899999999753211 11234456789999977775544 333 2 699999998765432110 000
Q ss_pred CCCCCCCCcc---ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh----cCccEEEeecceecC
Q 016370 153 KDSPLRQDPA---YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIG 217 (390)
Q Consensus 153 e~~~~~~~~~---~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G 217 (390)
..+....... .....+. ....+...|+.||.+...+.+.++++ .++.++.++||.+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 161 LGDLSGLAAGFKAPIAMIDG-------KEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred ccccccccccCCCcccccCC-------CCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 0000000000 0000000 00123457999999988777776553 379999999998853
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.8e-14 Score=131.70 Aligned_cols=109 Identities=18% Similarity=0.211 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+++|+|+||||+|+||+++++.|.++ |++|++++|++......... ....+..+.+|++|.+++.+.+.++|++|
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~----~~~~v~~v~~Dvsd~~~v~~~l~~IDiLI 250 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEING----EDLPVKTLHWQVGQEAALAELLEKVDILI 250 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhh----cCCCeEEEEeeCCCHHHHHHHhCCCCEEE
Confidence 56789999999999999999999998 99999999876544321110 01246788999999999999999999999
Q ss_pred EeccccCCc-cccCChhHHHHHhhhhHHHHHHHHH
Q 016370 95 NLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCS 128 (390)
Q Consensus 95 h~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~ 128 (390)
|+||..... ...++....+++|+.++.++++++.
T Consensus 251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 251 INHGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred ECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875322 2223456788999999999998864
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.1e-14 Score=125.88 Aligned_cols=223 Identities=9% Similarity=0.062 Sum_probs=144.2
Q ss_pred CCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 15 IKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 15 ~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
+.+|+++||||+ +-||..++++|.++ |++|++..|+.+. .......... ....+.++.+|++|.+++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHHHHH
Confidence 567899999986 79999999999998 9999887654321 1111110000 01246688999999998887775
Q ss_pred -----cccEEEEeccccCC-----ccc---cCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCC
Q 016370 89 -----MADLTINLAAICTP-----ADY---NTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~-----~~~---~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
.+|++||+||.... ... .++....+++|+.++..+++++... +.++|++||..-....
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------ 155 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI------ 155 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC------
Confidence 38999999997531 111 1233456778999988887765432 2689999986422110
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
.....|+.+|...+.+.+.++.+. |+++.++.||.+-.+....
T Consensus 156 ---------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~------- 201 (258)
T PRK07370 156 ---------------------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA------- 201 (258)
T ss_pred ---------------------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc-------
Confidence 022369999999999998887554 7999999999886653210
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ............| ..-+...+|+++++..++.... ...|+.+.+.++
T Consensus 202 ---~~~-~~~~~~~~~~~~p---------~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 202 ---VGG-ILDMIHHVEEKAP---------LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred ---ccc-chhhhhhhhhcCC---------cCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 000 0011111111111 1135568999999999987532 245677777664
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.2e-13 Score=122.58 Aligned_cols=221 Identities=11% Similarity=0.072 Sum_probs=144.7
Q ss_pred CCCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCC--hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 14 PIKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYN--DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 14 ~~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
.+.+|+++|||| ++-||.++++.|.++ |++|++++|+. ...+.+... ....+.++.+|+.|.++++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGRALRLTERIAKR----LPEPAPVLELDVTNEEHLASLADR 78 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCccchhHHHHHHHh----cCCCCcEEeCCCCCHHHHHHHHHH
Confidence 366789999999 899999999999998 99999998754 222222111 12356789999999988877764
Q ss_pred ------cccEEEEeccccCCc-----ccc---CChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCC
Q 016370 89 ------MADLTINLAAICTPA-----DYN---TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 89 ------~~d~Vih~a~~~~~~-----~~~---~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~ 151 (390)
.+|++||+||..... ... ++....+++|+.++..+++++... +.++|++|+....+
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------- 151 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------- 151 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-------
Confidence 389999999976321 111 223345789999988887766432 25788887532100
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.| ....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+....
T Consensus 152 ---~~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~------ 198 (256)
T PRK07889 152 ---WP------------------------AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA------ 198 (256)
T ss_pred ---CC------------------------ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc------
Confidence 00 1235899999999998887654 47999999999886653210
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+. .......+....|+ .+.+...+|+|++++.++.... ...++++.+.++
T Consensus 199 ----~~~-~~~~~~~~~~~~p~--------~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 199 ----IPG-FELLEEGWDERAPL--------GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred ----ccC-cHHHHHHHHhcCcc--------ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 000 01111111111111 1135678999999999987643 245677777664
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.3e-14 Score=120.07 Aligned_cols=161 Identities=14% Similarity=0.122 Sum_probs=117.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc---cccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL---EPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~---~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++||||+|+||.+++++|.++ |+ .|+++.|++....... ... .....++.++.+|+.+.+++..++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER-GARHLVLLSRSGPDAPGAAELLAEL-EALGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh-hCCeEEEEeCCCCCCccHHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999998 65 6888888654322110 000 00134677899999999888877654
Q ss_pred ---ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccc-cccccCCCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEV-YGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~v-y~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+++....... .++....++.|+.++.++++++++.+ .++|++||... ++..
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~-------------- 144 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP-------------- 144 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC--------------
Confidence 6999999997642211 13345668899999999999998877 88999998543 2221
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeeccee
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNW 215 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i 215 (390)
....|+.+|...+.+++.+ +..+++++.+.|+.+
T Consensus 145 --------------------~~~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~ 178 (180)
T smart00822 145 --------------------GQANYAAANAFLDALAAHR-RARGLPATSINWGAW 178 (180)
T ss_pred --------------------CchhhHHHHHHHHHHHHHH-HhcCCceEEEeeccc
Confidence 1226999999999998654 456889998887755
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=133.86 Aligned_cols=217 Identities=15% Similarity=0.137 Sum_probs=144.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
+++++++|||||+|.||..+++.|.++ |++|+++++.... ...+... -+..++.+|++|.+++..++.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~ 279 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANR------VGGTALALDITAPDAPARIAEHLA 279 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHH------cCCeEEEEeCCCHHHHHHHHHHHH
Confidence 456789999999999999999999998 9999999885422 2221111 134678899999988877765
Q ss_pred ----cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||...... ........+++|+.++.++++++... . .+||++||...+....
T Consensus 280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-------- 351 (450)
T PRK08261 280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-------- 351 (450)
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC--------
Confidence 3799999999764321 12234456779999999999988652 2 6899999965432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+ .++++.++.|+.+-.+... .
T Consensus 352 -------------------------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~----------~ 396 (450)
T PRK08261 352 -------------------------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA----------A 396 (450)
T ss_pred -------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh----------c
Confidence 1236999999888777776543 5899999999887433211 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+......... -.++ ...--.+|+|+++.+++.... ...|+++.++++
T Consensus 397 ~~~~~~~~~~~---~~~l---------~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 397 IPFATREAGRR---MNSL---------QQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred cchhHHHHHhh---cCCc---------CCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 11101111100 0011 111236799999998886432 235788888774
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-13 Score=121.34 Aligned_cols=204 Identities=13% Similarity=0.206 Sum_probs=136.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|+++||||++-||..++++|. + |++|++++|+++..+.+.+.........+.++.+|+.|.+++++++. .+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 679999999999999999998 6 89999999987665544322111112347889999999988877664 38
Q ss_pred cEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHH----HHHhCC--CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVK----YCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~----~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|++||+||........ .+..+.+.+|+.+...++. .+.+.+ .++|++||..-+-...
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------------- 145 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR------------- 145 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc-------------
Confidence 9999999986432111 1122345567777665443 344332 6899999964321110
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
....|+.+|...+.+.+.++.+ .++++..+.||.+..+...
T Consensus 146 --------------------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~---------------- 189 (246)
T PRK05599 146 --------------------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT---------------- 189 (246)
T ss_pred --------------------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc----------------
Confidence 1236999999999888887655 4788899999887654211
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
. ..+.+. .+..+|+|++++.++.... .++.+.+.+
T Consensus 190 -----~---~~~~~~---------~~~pe~~a~~~~~~~~~~~--~~~~~~~~~ 224 (246)
T PRK05599 190 -----G---MKPAPM---------SVYPRDVAAAVVSAITSSK--RSTTLWIPG 224 (246)
T ss_pred -----C---CCCCCC---------CCCHHHHHHHHHHHHhcCC--CCceEEeCc
Confidence 0 000000 1468999999999999863 234555554
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.2e-14 Score=129.48 Aligned_cols=171 Identities=14% Similarity=0.119 Sum_probs=120.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC-CCCeeEEeCCCCC--hhHHH---Hhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG-ADRIQFHRLNIKH--DSRLE---GLIKM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~i~~~~~D~~d--~~~~~---~~~~~ 89 (390)
.++.++||||||.||.+++++|.++ |++|++++|+++..+.+........ ...+..+.+|+.+ .+.+. +.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999999999999999999999 9999999998876554432211111 1356778889984 23333 33344
Q ss_pred --ccEEEEeccccCCc--cc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPA--DY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 --~d~Vih~a~~~~~~--~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|++||+||..... .. .++....+++|+.++..+.+++. +.+ .++|++||...+.... .|
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-------~p 203 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-------DP 203 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-------Cc
Confidence 56999999976321 11 12234577899999988887763 344 7899999976532100 00
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGP 218 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~ 218 (390)
..+.|+.+|...+.+.+.+..+. |++++++.||.+-.+
T Consensus 204 ------------------------~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 204 ------------------------LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred ------------------------cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 12479999999999988876553 799999999988654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-13 Score=117.86 Aligned_cols=205 Identities=16% Similarity=0.203 Sum_probs=135.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~d~V 93 (390)
|+|+||||+|+||++++++|.++. ++.|....|..... . ...++.++.+|+++.+.++.+.+ ++|+|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~-------~~~~~~~~~~Dls~~~~~~~~~~~~~~id~l 71 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F-------QHDNVQWHALDVTDEAEIKQLSEQFTQLDWL 71 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c-------ccCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 689999999999999999999982 35666656644321 1 12477889999999888776544 58999
Q ss_pred EEeccccCCcc------c-c---CChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 94 INLAAICTPAD------Y-N---TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 94 ih~a~~~~~~~------~-~---~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
||+||...... . . ......+.+|+.++..+++.+.. .+ .+++++||.. +.... . +.
T Consensus 72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~----~--~~- 142 (235)
T PRK09009 72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD----N--RL- 142 (235)
T ss_pred EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc----C--CC-
Confidence 99999874211 0 1 11234667888888777665543 33 6888988732 11100 0 00
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .++.+..+.||.+..+...
T Consensus 143 ---------------------~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~------------ 189 (235)
T PRK09009 143 ---------------------GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK------------ 189 (235)
T ss_pred ---------------------CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc------------
Confidence 02236999999999999888754 3788889999888665422
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGN 291 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~ 291 (390)
. ..... ....++..+|+|+++..++..... ..|..+.+.+
T Consensus 190 -~--------~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g 230 (235)
T PRK09009 190 -P--------FQQNV---------PKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDG 230 (235)
T ss_pred -c--------hhhcc---------ccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCC
Confidence 0 00111 112256799999999999987532 2455555555
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=115.08 Aligned_cols=151 Identities=16% Similarity=0.212 Sum_probs=113.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC--ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc------
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVY--NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------ 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~--~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------ 89 (390)
|+|+||||+|-||..++++|++++++.|+++.|+ .+....+...... ...++.++.+|+++.++++.+++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA-PGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH-TTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 5799999999999999999999955678888887 3333333211111 236889999999999988887763
Q ss_pred -ccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 90 -ADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
+|+|||++|........+ .....+++|+.+...+.+++...+ .++|++||....-+..
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------- 143 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSP---------------- 143 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSST----------------
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCC----------------
Confidence 899999999986433322 334577789999999998887744 8999999975542221
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE 202 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 202 (390)
....|+.+|...+.+.+.++++
T Consensus 144 -----------------~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 144 -----------------GMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp -----------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------CChhHHHHHHHHHHHHHHHHHh
Confidence 2347999999999999888754
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=135.73 Aligned_cols=167 Identities=13% Similarity=0.158 Sum_probs=126.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
.+++++|||||++.||..+++.|.++ |++|++++|+.+....+... ....+.++.+|++|++++.+++..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADS----LGPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----hCCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999 99999999987665443322 124567899999999988877753
Q ss_pred --ccEEEEeccccCC------ccccCChhHHHHHhhhhHHHHHHHHHhC----C--CcEEEeecccccccccCCCCCCCC
Q 016370 90 --ADLTINLAAICTP------ADYNTRPLDTIYSNFIDALPVVKYCSEN----N--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 --~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|++||+||...+ .....+....+++|+.++..+++++... + .++|++||........
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~-------- 149 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP-------- 149 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC--------
Confidence 8999999987421 1112345567889999999888776532 3 4899999965432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
....|+.+|...+.+.+.++.+ .+++++++.|+.+-.+.
T Consensus 150 -------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 150 -------------------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 1236999999999998887665 47999999999886653
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3e-13 Score=119.81 Aligned_cols=165 Identities=15% Similarity=0.176 Sum_probs=117.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCC-CeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAD-RIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~i~~~~~D~~d~~~~~~~~~--- 88 (390)
..+.+|.|+|||||.-||.+++.+|.++ |..++.+.|....++.+.+........ ++.++.+|++|.+++..+++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999 998888877765555442211111122 59999999999998886653
Q ss_pred ----cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|++||.||......... +....+++|+.|+..+..+ +++.+ .++|.+||..=+-.-
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~--------- 157 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL--------- 157 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC---------
Confidence 4999999999986322222 2334677899986666554 46666 899999996532211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEee
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVR 211 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 211 (390)
| ..+.|..||.+.+.+...+.++..-..++++
T Consensus 158 P------------------------~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~ 189 (282)
T KOG1205|consen 158 P------------------------FRSIYSASKHALEGFFETLRQELIPLGTIII 189 (282)
T ss_pred C------------------------cccccchHHHHHHHHHHHHHHHhhccCceEE
Confidence 0 1237999999999999888777644343333
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.8e-13 Score=122.05 Aligned_cols=223 Identities=18% Similarity=0.145 Sum_probs=136.8
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh-hHHHHhhcc-
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD-SRLEGLIKM- 89 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~-~~~~~~~~~- 89 (390)
...+++++|||+||||.+|+-+++.|+++ |+.|+++.|+......+.. ......+.+.+..|.... +.+..+...
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkr-gf~vra~VRd~~~a~~~~~--~~~~d~~~~~v~~~~~~~~d~~~~~~~~~ 150 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKR-GFSVRALVRDEQKAEDLLG--VFFVDLGLQNVEADVVTAIDILKKLVEAV 150 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHC-CCeeeeeccChhhhhhhhc--ccccccccceeeeccccccchhhhhhhhc
Confidence 34567789999999999999999999999 8999999999876665543 111123555666665543 333343333
Q ss_pred ---ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccc
Q 016370 90 ---ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYV 165 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~ 165 (390)
..+|+-+++-.. ... +-.....+...|++|++++|+..| +|+|++|+.+.-.... +..
T Consensus 151 ~~~~~~v~~~~ggrp--~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~--------~~~------- 212 (411)
T KOG1203|consen 151 PKGVVIVIKGAGGRP--EEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ--------PPN------- 212 (411)
T ss_pred cccceeEEecccCCC--Ccc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC--------Cch-------
Confidence 345555554332 111 111223467889999999999999 9999999865321110 000
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
...-...+-.+|+.+|.++ ++.|++++|+|++...-...... . ...
T Consensus 213 ------------~~~~~~~~~~~k~~~e~~~----~~Sgl~ytiIR~g~~~~~~~~~~--------------~----~~~ 258 (411)
T KOG1203|consen 213 ------------ILLLNGLVLKAKLKAEKFL----QDSGLPYTIIRPGGLEQDTGGQR--------------E----VVV 258 (411)
T ss_pred ------------hhhhhhhhhHHHHhHHHHH----HhcCCCcEEEeccccccCCCCcc--------------e----ecc
Confidence 0000112447788888887 45799999999998765433210 0 001
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
...+....+++ .--.+.-.|+|+.++.++.+.......+..++.
T Consensus 259 ~~~~~~~~~~~--~~~~i~r~~vael~~~all~~~~~~~k~~~~v~ 302 (411)
T KOG1203|consen 259 DDEKELLTVDG--GAYSISRLDVAELVAKALLNEAATFKKVVELVL 302 (411)
T ss_pred cCccccccccc--cceeeehhhHHHHHHHHHhhhhhccceeEEeec
Confidence 11111222221 113677789999999999887643435555554
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=114.32 Aligned_cols=166 Identities=13% Similarity=0.089 Sum_probs=117.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++++++||||++-||..++++|.++ |++|++++|+.+..+...+.... ....+..+.+|+.|++++++++.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999998 99999999987665443321111 12356778899999988877653
Q ss_pred --cccEEEEeccccCCc-cccC----ChhHHHHHhhhhHHHHHH----HHHhCC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-DYNT----RPLDTIYSNFIDALPVVK----YCSENN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-~~~~----~~~~~~~~nv~~~~~l~~----~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||+||..... ...+ +....+..|+.++..++. ..++.+ ..+|++||...+.
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------- 149 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ----------- 149 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-----------
Confidence 489999999754321 1111 122345567666655543 343432 6899999853210
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
+...|+.+|...+.+.+.++.+ +++++..+.||.+-.+
T Consensus 150 -------------------------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 150 -------------------------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred -------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 1126999999999988887654 4799999999987665
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.6e-13 Score=111.97 Aligned_cols=209 Identities=19% Similarity=0.160 Sum_probs=148.5
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEecc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAA 98 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~ 98 (390)
++++.|+.||.|+++++..... +++|-.+.|+..+ +.+.. +...+.++.+|....+-+...+.++..|+-+++
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~v-v~svgilsen~~k-~~l~s-----w~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g 126 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNV-VHSVGILSENENK-QTLSS-----WPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG 126 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhh-ceeeeEeecccCc-chhhC-----CCcccchhhccccccCcchhhhcCCcccHHHhc
Confidence 6899999999999999999999 9999999998652 22222 356788889998877777888888999999887
Q ss_pred ccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCC
Q 016370 99 ICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177 (390)
Q Consensus 99 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~ 177 (390)
..+ +...+.++|-....+-++++.+.| ++|+|+|... ||..
T Consensus 127 gfg------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~------------------------------- 168 (283)
T KOG4288|consen 127 GFG------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP------------------------------- 168 (283)
T ss_pred Ccc------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC-------------------------------
Confidence 543 445666778877888899999999 9999999742 2221
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-cCCCeEEecCC
Q 016370 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-RRQPLKLVDGG 256 (390)
Q Consensus 178 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 256 (390)
...|+ .|-.+|..+|..+..- +..+-++||||.+||...- .+.-.|-..+...+......+. .-..+++. +
T Consensus 169 ~~i~r-GY~~gKR~AE~Ell~~---~~~rgiilRPGFiyg~R~v--~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g 240 (283)
T KOG4288|consen 169 PLIPR-GYIEGKREAEAELLKK---FRFRGIILRPGFIYGTRNV--GGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--G 240 (283)
T ss_pred Cccch-hhhccchHHHHHHHHh---cCCCceeeccceeeccccc--CcccccHHhhhhhHHHHHHhhhchhhcCccc--c
Confidence 11133 5999999999887654 4588999999999998432 1111111111122222222221 11224444 3
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
......+.++++|.+.++++++++
T Consensus 241 ~l~~ppvnve~VA~aal~ai~dp~ 264 (283)
T KOG4288|consen 241 PLLAPPVNVESVALAALKAIEDPD 264 (283)
T ss_pred cccCCCcCHHHHHHHHHHhccCCC
Confidence 467789999999999999999985
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.9e-13 Score=106.34 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=121.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.|.+|.++|.||||-.|+.|++++++.+.+ +|+++.|++..... ..+.+.....|...-+++...+.++|+
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~dV 86 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------TDKVVAQVEVDFSKLSQLATNEQGPDV 86 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------ccceeeeEEechHHHHHHHhhhcCCce
Confidence 477889999999999999999999998655 59999988532221 135677788898888888888999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
.|.+.|.+..... ....+.+.-.....++++|++.| ++|+.+||...-..
T Consensus 87 ~FcaLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s-------------------------- 137 (238)
T KOG4039|consen 87 LFCALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS-------------------------- 137 (238)
T ss_pred EEEeecccccccc---cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc--------------------------
Confidence 9999887743221 22344455555778889999999 99999999754111
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCc-cEEEeecceecCCCCC
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL-EFTIVRPFNWIGPRMD 221 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~ 221 (390)
.+--|...|-..|.-+.++. + .++|+|||.+.|....
T Consensus 138 ---------SrFlY~k~KGEvE~~v~eL~----F~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 138 ---------SRFLYMKMKGEVERDVIELD----FKHIIILRPGPLLGERTE 175 (238)
T ss_pred ---------cceeeeeccchhhhhhhhcc----ccEEEEecCcceeccccc
Confidence 12259999999998886653 4 6899999999998765
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-12 Score=118.24 Aligned_cols=172 Identities=13% Similarity=0.107 Sum_probs=116.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----------hhccccccccCCCCCeeEEeCCCCChhHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----------IKHLLEPESQTGADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~i~~~~~D~~d~~~~ 83 (390)
.+.+|++|||||++.||.++++.|+++ |++|++++|+..+ ...+.+.... ....+.++.+|+.|.+++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHHH
Confidence 467899999999999999999999998 9999999987421 1111111100 123567899999999888
Q ss_pred HHhhc-------cccEEEEec-cccC-----Ccccc---CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccc
Q 016370 84 EGLIK-------MADLTINLA-AICT-----PADYN---TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEV 142 (390)
Q Consensus 84 ~~~~~-------~~d~Vih~a-~~~~-----~~~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~v 142 (390)
+.++. .+|++||+| +... ..... .+....+++|+.+...++.++. +.+ .++|++||...
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~ 162 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence 87765 379999999 6421 11111 1233456778888777665553 333 68999998432
Q ss_pred -cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCC
Q 016370 143 -YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGP 218 (390)
Q Consensus 143 -y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~ 218 (390)
+.... . .....|+.+|.....+.+.++.+. |+++..+.||.+-.+
T Consensus 163 ~~~~~~---------~----------------------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 163 EYNATH---------Y----------------------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred cccCcC---------C----------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 21100 0 012369999999999988776544 789999999877443
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.9e-12 Score=119.74 Aligned_cols=187 Identities=12% Similarity=0.065 Sum_probs=117.6
Q ss_pred EEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cccE
Q 016370 21 CMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MADL 92 (390)
Q Consensus 21 lItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~d~ 92 (390)
+||||++.||.+++++|.++ | ++|+++.|+............. ....+.++.+|+.|.+++++++. .+|+
T Consensus 1 lITGas~GIG~aia~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAET-GKWHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 69999999999999999999 8 9999999987654433221110 12367888999999998877764 3799
Q ss_pred EEEeccccCCc--c---ccCChhHHHHHhhhhHHHHHHHH----HhC---CCcEEEeeccccccccc-C--CC-CCCCC-
Q 016370 93 TINLAAICTPA--D---YNTRPLDTIYSNFIDALPVVKYC----SEN---NKRLIHFSTCEVYGKTI-G--SF-LPKDS- 155 (390)
Q Consensus 93 Vih~a~~~~~~--~---~~~~~~~~~~~nv~~~~~l~~~~----~~~---~~~~v~~Ss~~vy~~~~-~--~~-~~e~~- 155 (390)
+||+||..... . ..++....+++|+.++..+++++ ++. +.++|++||...+-... + .+ .....
T Consensus 79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~ 158 (308)
T PLN00015 79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL 158 (308)
T ss_pred EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence 99999975321 1 12234567889999977775543 333 25899999975432110 0 00 00000
Q ss_pred -----CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh----cCccEEEeecceecC
Q 016370 156 -----PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIG 217 (390)
Q Consensus 156 -----~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G 217 (390)
+....+.....++. ...+...|+.||.+.+.+.+.++++ .|+.++++.||.|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~--------~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 159 RGLAGGLNGLNSSAMIDGG--------EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhhhcccCCccchhhcccc--------CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 00000000000000 0013457999999977766666544 479999999999954
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.2e-12 Score=104.65 Aligned_cols=165 Identities=15% Similarity=0.172 Sum_probs=123.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+.+||||||+.-||..|+++|++. |.+|++..|+...+...... -+.+....+|+.|.+..+++++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~-----~p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAE-----NPEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhc-----CcchheeeecccchhhHHHHHHHHHhhC
Confidence 46789999999999999999999999 99999999999877665543 3577788999999886665554
Q ss_pred -cccEEEEeccccCCc------cccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPA------DYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
..+++|++||+...- ...++....+++|+.++..|..+. .+.. .-+|.+||.-.|-+-. ..|
T Consensus 77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~------~~P 150 (245)
T COG3967 77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMA------STP 150 (245)
T ss_pred CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccc------ccc
Confidence 279999999988432 222334567778999988776554 3444 7899999965443321 112
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHH---HHHHhhhcCccEEEeecceecCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL---IYAEGAENGLEFTIVRPFNWIGP 218 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~---~~~~~~~~~~~~~ilR~~~i~G~ 218 (390)
.|..+|.....+ +|+..+..+++++=+-|+.|--+
T Consensus 151 ---------------------------vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 151 ---------------------------VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ---------------------------cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 599999988654 45555666889999999888654
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.1e-12 Score=111.69 Aligned_cols=217 Identities=9% Similarity=0.075 Sum_probs=134.9
Q ss_pred HHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----cccEEEEeccccCCccccCC
Q 016370 33 LCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----MADLTINLAAICTPADYNTR 108 (390)
Q Consensus 33 l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~ 108 (390)
++++|+++ |++|++++|+.+... ..+++.+|++|.+++.++++ ++|+|||+||... ...
T Consensus 1 ~a~~l~~~-G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~ 63 (241)
T PRK12428 1 TARLLRFL-GARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAP 63 (241)
T ss_pred ChHHHHhC-CCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCC
Confidence 46788888 999999999865421 23467899999999988887 3899999999753 234
Q ss_pred hhHHHHHhhhhHHHHHHHHHhC--C-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchh
Q 016370 109 PLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSY 185 (390)
Q Consensus 109 ~~~~~~~nv~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y 185 (390)
....+++|+.++..+++++... . .++|++||...|+.....+..+.-....+ . ++...........+.+.|
T Consensus 64 ~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~Y 137 (241)
T PRK12428 64 VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATAS-----F-DEGAAWLAAHPVALATGY 137 (241)
T ss_pred HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccch-----H-HHHHHhhhccCCCcccHH
Confidence 5678899999999999988653 2 69999999988763221111000000000 0 000000000001234579
Q ss_pred HHHHHHHHHHHHHHh----hhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceee
Q 016370 186 ACAKQLIERLIYAEG----AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261 (390)
Q Consensus 186 ~~sK~~~E~~~~~~~----~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (390)
+.+|...+.+.+.++ ...|+++.+++||.+.++.... ....... ..... ... ....
T Consensus 138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~----------~~~~~~~--~~~~~-~~~-------~~~~ 197 (241)
T PRK12428 138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD----------FRSMLGQ--ERVDS-DAK-------RMGR 197 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc----------chhhhhh--Hhhhh-ccc-------ccCC
Confidence 999999998888776 4458999999999998875320 0000000 00000 000 1112
Q ss_pred eeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 262 FIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 262 ~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+...+|+|++++.++.... ...|+.+.+.++
T Consensus 198 ~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg 229 (241)
T PRK12428 198 PATADEQAAVLVFLCSDAARWINGVNLPVDGG 229 (241)
T ss_pred CCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence 4668999999999886432 234566666654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.5e-11 Score=109.32 Aligned_cols=223 Identities=10% Similarity=0.057 Sum_probs=138.2
Q ss_pred CCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc----------cC--CCCCeeEEeCCC--C
Q 016370 15 IKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES----------QT--GADRIQFHRLNI--K 78 (390)
Q Consensus 15 ~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~----------~~--~~~~i~~~~~D~--~ 78 (390)
+++|++||||| +.-||.++++.|.++ |.+|++ .|....+..+..... .. .......+.+|+ .
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~-Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA-GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC-CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 77899999999 799999999999999 999988 554333222110000 00 001235677888 3
Q ss_pred Chh------------------HHHHhhc-------cccEEEEeccccC----C--ccccCChhHHHHHhhhhHHHHHHHH
Q 016370 79 HDS------------------RLEGLIK-------MADLTINLAAICT----P--ADYNTRPLDTIYSNFIDALPVVKYC 127 (390)
Q Consensus 79 d~~------------------~~~~~~~-------~~d~Vih~a~~~~----~--~~~~~~~~~~~~~nv~~~~~l~~~~ 127 (390)
+.+ ++..++. .+|++||+||... + ....++....+++|+.+...+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 222 4555544 3899999997532 1 1112344567789999988887766
Q ss_pred HhC---CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCC-chhHHHHHHHHHHHHHHhhh-
Q 016370 128 SEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR-WSYACAKQLIERLIYAEGAE- 202 (390)
Q Consensus 128 ~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~~~~~- 202 (390)
... +.++|++||....... | .. ..|+.+|...+.+.+.++.+
T Consensus 165 ~p~m~~~G~II~isS~a~~~~~---------p------------------------~~~~~Y~asKaAl~~l~~~la~El 211 (303)
T PLN02730 165 GPIMNPGGASISLTYIASERII---------P------------------------GYGGGMSSAKAALESDTRVLAFEA 211 (303)
T ss_pred HHHHhcCCEEEEEechhhcCCC---------C------------------------CCchhhHHHHHHHHHHHHHHHHHh
Confidence 442 2589999986432111 0 11 26999999999999888754
Q ss_pred ---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 203 ---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 203 ---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.|+++..+-||.+-.+.... .. .............|. ..+...+|++.+++.++...
T Consensus 212 ~~~~gIrVn~V~PG~v~T~~~~~----------~~-~~~~~~~~~~~~~pl---------~r~~~peevA~~~~fLaS~~ 271 (303)
T PLN02730 212 GRKYKIRVNTISAGPLGSRAAKA----------IG-FIDDMIEYSYANAPL---------QKELTADEVGNAAAFLASPL 271 (303)
T ss_pred CcCCCeEEEEEeeCCccCchhhc----------cc-ccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc
Confidence 46899999998886553220 00 001111111111111 12456899999999998753
Q ss_pred C-CCCCceEEecCC
Q 016370 280 A-RANGHIFNVGNP 292 (390)
Q Consensus 280 ~-~~~~~~~nv~~~ 292 (390)
. ...++.+.+.++
T Consensus 272 a~~itG~~l~vdGG 285 (303)
T PLN02730 272 ASAITGATIYVDNG 285 (303)
T ss_pred ccCccCCEEEECCC
Confidence 2 245677777664
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=108.73 Aligned_cols=203 Identities=13% Similarity=0.126 Sum_probs=139.7
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
..++.+..||||||++-+|+.++.++.++ |..+.+.+..........+.... . ..+..+.+|+++++++....+
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~r-g~~~vl~Din~~~~~etv~~~~~-~-g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKR-GAKLVLWDINKQGNEETVKEIRK-I-GEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHh-CCeEEEEeccccchHHHHHHHHh-c-CceeEEEecCCCHHHHHHHHHHHH
Confidence 35678899999999999999999999999 89999999877554433222111 1 258899999999988876665
Q ss_pred ----cccEEEEeccccCCccccC----ChhHHHHHhhhhHHH----HHHHHHhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYNT----RPLDTIYSNFIDALP----VVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~----l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||.||........+ .-...+++|+.+... ++-.+.+.. .++|.++|..-+-...
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~-------- 181 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA-------- 181 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc--------
Confidence 2999999999996543333 233567789988554 455555655 8999999964322211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh------hhcCccEEEeecceecCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG------AENGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~------~~~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|..||.++.-+.+.+. ...|++++.+-|+.+=-.
T Consensus 182 -------------------------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg----------- 225 (300)
T KOG1201|consen 182 -------------------------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG----------- 225 (300)
T ss_pred -------------------------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-----------
Confidence 12269999999876655443 223688888887766311
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
++ .. ..+. ....+.+..+.+|+.++.++....
T Consensus 226 ------mf----~~---~~~~------~~l~P~L~p~~va~~Iv~ai~~n~ 257 (300)
T KOG1201|consen 226 ------MF----DG---ATPF------PTLAPLLEPEYVAKRIVEAILTNQ 257 (300)
T ss_pred ------cc----CC---CCCC------ccccCCCCHHHHHHHHHHHHHcCC
Confidence 11 01 1111 234567889999999999998753
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.2e-12 Score=113.14 Aligned_cols=213 Identities=18% Similarity=0.221 Sum_probs=145.6
Q ss_pred cCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--------cccEE
Q 016370 24 GAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--------MADLT 93 (390)
Q Consensus 24 Gat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--------~~d~V 93 (390)
|++ +-||.++++.|+++ |++|++++|+.+............ .+.+++.+|+.++++++.++. .+|++
T Consensus 1 g~~~s~GiG~aia~~l~~~-Ga~V~~~~~~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE-GANVILTDRNEEKLADALEELAKE--YGAEVIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT-TEEEEEEESSHHHHHHHHHHHHHH--TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHHH--cCCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 666 99999999999999 999999999987632211111111 234579999999998887754 37999
Q ss_pred EEeccccCC----cccc----CChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 94 INLAAICTP----ADYN----TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 94 ih~a~~~~~----~~~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
||+++.... .... ++....++.|+.+...+++++.+. +.++|++||.......
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~---------------- 141 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM---------------- 141 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS----------------
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC----------------
Confidence 999988754 1111 234456778999988888877443 2689999987532221
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---h-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---E-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
.....|+.+|...+.+.+.++. . +|+++.++.||.+-.+... ......
T Consensus 142 -----------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~-----------~~~~~~ 193 (241)
T PF13561_consen 142 -----------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTE-----------RIPGNE 193 (241)
T ss_dssp -----------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHH-----------HHHTHH
T ss_pred -----------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchh-----------cccccc
Confidence 1233799999999999887753 3 6799999999888755321 001123
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.+........|+. .+...+|+|+++..++... ....|+++.|.+|
T Consensus 194 ~~~~~~~~~~pl~---------r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 194 EFLEELKKRIPLG---------RLGTPEEVANAVLFLASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHHHHSTTS---------SHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred chhhhhhhhhccC---------CCcCHHHHHHHHHHHhCccccCccCCeEEECCC
Confidence 3444444443331 2457999999999998864 2356788888875
|
... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-11 Score=111.59 Aligned_cols=185 Identities=14% Similarity=0.118 Sum_probs=132.1
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccc-ccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
..+.+++++|||||.-||..+++.|..+ |.+|+...|+........+ .........+.++.+|+.+.+.+..+...
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 4567789999999999999999999999 8999999998744333222 11112345788899999999888776653
Q ss_pred -----ccEEEEeccccCCccc--cCChhHHHHHhhhhHHHHH----HHHHhCC-CcEEEeeccccccc--ccCCCCCCCC
Q 016370 90 -----ADLTINLAAICTPADY--NTRPLDTIYSNFIDALPVV----KYCSENN-KRLIHFSTCEVYGK--TIGSFLPKDS 155 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~~~--~~~~~~~~~~nv~~~~~l~----~~~~~~~-~~~v~~Ss~~vy~~--~~~~~~~e~~ 155 (390)
.|+.|+.||+..++.. .+..+..+.+|..|...|. ..++... .|+|++||..- +. .......+..
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~ 188 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKA 188 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhc
Confidence 7999999999976542 2345778889999866554 4556665 89999999654 11 1111111111
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~ 220 (390)
..- .....|+.||.+...+..+++++. |+.+..+.||.+..+..
T Consensus 189 ~~~---------------------~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l 234 (314)
T KOG1208|consen 189 KLY---------------------SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL 234 (314)
T ss_pred cCc---------------------cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence 100 011259999999988888887666 69999999999988744
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-10 Score=103.22 Aligned_cols=232 Identities=12% Similarity=0.090 Sum_probs=150.1
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC--CCCCeeEEeCCCCChhHHHHhhc--
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT--GADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
.++.+|.+|||||+.-||++++++|.+. |.+|++.+|+.+............ ....+..+.+|+++.++.++++.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999 999999999987654332211110 13468889999998876665553
Q ss_pred ------cccEEEEeccccCCcc-cc----CChhHHHHHhhhh-HHHHHHHHH----hCC-CcEEEeecccccccccCCCC
Q 016370 89 ------MADLTINLAAICTPAD-YN----TRPLDTIYSNFID-ALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 89 ------~~d~Vih~a~~~~~~~-~~----~~~~~~~~~nv~~-~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~ 151 (390)
..|++|+.||...... .. +.....+++|+.| ...+..++. +.+ ..++++||..-+.....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~--- 159 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG--- 159 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC---
Confidence 3899999999886431 22 2333456689985 445544443 323 67888888754433210
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
+...|+.+|...+.+.+..+.+ +|+++.++-|+.|..+....
T Consensus 160 -----------------------------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~------ 204 (270)
T KOG0725|consen 160 -----------------------------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAA------ 204 (270)
T ss_pred -----------------------------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccc------
Confidence 1137999999999999988754 48999999999988774110
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.........+.........++ .-.+...+|+++.+..++.... ...|+.+.+.++
T Consensus 205 --~~~~~~~~~~~~~~~~~~~~p-------~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG 260 (270)
T KOG0725|consen 205 --GLDDGEMEEFKEATDSKGAVP-------LGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGG 260 (270)
T ss_pred --ccccchhhHHhhhhccccccc-------cCCccCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence 000011112222111111111 1135568999999998887642 234566666654
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.7e-11 Score=96.68 Aligned_cols=214 Identities=13% Similarity=0.169 Sum_probs=146.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+..+.++||||+.-||++++..|.++ |++|.+.+++....+....... .......+.+|+.+..++...+++
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~--g~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLG--GYGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcC--CCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 45578999999999999999999999 9999999988764433222110 113556788999998877775552
Q ss_pred --ccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHHhC----C---CcEEEeecc-cccccccCCCCCCCC
Q 016370 90 --ADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCSEN----N---KRLIHFSTC-EVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 --~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~v~~Ss~-~vy~~~~~~~~~e~~ 155 (390)
++++++|||+.... ...+++.+-+.+|+.|+..+.+++-+. + -++|.+||. .-.|..
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~--------- 159 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF--------- 159 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc---------
Confidence 99999999998532 334456677889999988877766433 1 489999994 111111
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHH--------HHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA--------KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~s--------K~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
..+.|+.+ |.++.++ .+.++++..+-|+.|--|...
T Consensus 160 -------------------------GQtnYAAsK~GvIgftktaArEl-----a~knIrvN~VlPGFI~tpMT~------ 203 (256)
T KOG1200|consen 160 -------------------------GQTNYAASKGGVIGFTKTAAREL-----ARKNIRVNVVLPGFIATPMTE------ 203 (256)
T ss_pred -------------------------cchhhhhhcCceeeeeHHHHHHH-----hhcCceEeEeccccccChhhh------
Confidence 11135444 4444443 345899999999999888654
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+-+...+.+...-|.-..|+ .+|+|..++.+....+ ...|..+.+.++
T Consensus 204 -------~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 204 -------AMPPKVLDKILGMIPMGRLGE---------AEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred -------hcCHHHHHHHHccCCccccCC---------HHHHHHHHHHHhccccccccceeEEEecc
Confidence 234556667777766655554 7889999888774432 134577777764
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.30 E-value=7e-11 Score=100.27 Aligned_cols=161 Identities=14% Similarity=0.186 Sum_probs=107.8
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh---hccccccccCCCCCeeEEeCCCCChhHHHHhhcc------
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI---KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------ 89 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------ 89 (390)
++|||||+|-||..+++.|.++...+|+++.|+.... ....+.... ....+.++.+|++|++++.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 5899999999999999999999556899999983211 111111111 245789999999999999998864
Q ss_pred -ccEEEEeccccCCccccC-C---hhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccc-ccccccCCCCCCCCCCCCCcc
Q 016370 90 -ADLTINLAAICTPADYNT-R---PLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCE-VYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~~-~---~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~-vy~~~~~~~~~e~~~~~~~~~ 162 (390)
++.|||+|+......... + ....+...+.++.+|.++..... ..||.+||.. ++|..
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~---------------- 144 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP---------------- 144 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T----------------
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc----------------
Confidence 688999999875322222 2 33345568889999999998877 8889988864 45543
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeeccee
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNW 215 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i 215 (390)
....|+.+-...+.+.+... ..+.+++.+..+.+
T Consensus 145 ------------------gq~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 145 ------------------GQSAYAAANAFLDALARQRR-SRGLPAVSINWGAW 178 (181)
T ss_dssp ------------------TBHHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EB
T ss_pred ------------------chHhHHHHHHHHHHHHHHHH-hCCCCEEEEEcccc
Confidence 22369999999998887764 45899888876543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-10 Score=100.84 Aligned_cols=203 Identities=14% Similarity=0.184 Sum_probs=140.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhcc-------
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIKM------- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~~------- 89 (390)
.+|+||||+.-+|..++..+..+ |.+|.++.|+..+...+....... ....+.++.+|+.|.+++..++++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 48999999999999999999999 999999999988776655433321 223477999999999988888864
Q ss_pred ccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC---C---cEEEeeccc-ccccccCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN---K---RLIHFSTCE-VYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~---~---~~v~~Ss~~-vy~~~~~~~~~e~~~~~ 158 (390)
+|.+|||||..-+....+ ..+...++|..++.+++.++...- . +++.+||.. .++-.
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~------------ 180 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY------------ 180 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc------------
Confidence 799999999886654433 334566799999999988664332 2 788888742 22211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
..++|..+|.+.-.+..... ..+++.++..-|+.+--|+..
T Consensus 181 ----------------------GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE-------------- 224 (331)
T KOG1210|consen 181 ----------------------GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE-------------- 224 (331)
T ss_pred ----------------------cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc--------------
Confidence 12357777777665544443 445788888888887777543
Q ss_pred hHHHHHHHHhcCCC--eEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 236 VLACFSNNLLRRQP--LKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
+-...+| ..+.. ..-+.+--+++|.+++.=+.+.
T Consensus 225 -------~En~tkP~~t~ii~---g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 225 -------RENKTKPEETKIIE---GGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred -------cccccCchheeeec---CCCCCcCHHHHHHHHHhHHhhc
Confidence 0011112 11221 1223478899999999887764
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1e-10 Score=104.87 Aligned_cols=166 Identities=17% Similarity=0.186 Sum_probs=118.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCC-CCeeEEeCCCCC-hhHHHHhhc--
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGA-DRIQFHRLNIKH-DSRLEGLIK-- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~-~~i~~~~~D~~d-~~~~~~~~~-- 88 (390)
+.+|+||||||++-||..+++.|.++ |+.|+++.+.... ......... ... ..+.+..+|+++ .+.++.++.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE-GARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 56789999999999999999999977 9998888877543 122111110 011 357778899998 777766664
Q ss_pred -----cccEEEEeccccCC--c---cccCChhHHHHHhhhhHHHHHHHHHhCCC--cEEEeecccccccccCCCCCCCCC
Q 016370 89 -----MADLTINLAAICTP--A---DYNTRPLDTIYSNFIDALPVVKYCSENNK--RLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~--~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|++||+||.... . ...+.....+.+|+.+...+.+++...-+ ++|++||.... ...
T Consensus 81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~--------- 150 (251)
T COG1028 81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGP--------- 150 (251)
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCC---------
Confidence 28999999998642 1 11234556777899988888775544444 99999997643 221
Q ss_pred CCCCccccccccCCCCcccCCCCCC-CchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQ-RWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI 216 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 216 (390)
+ ...|+.+|...+.+.+.+..+ +|+.+..+-||.+-
T Consensus 151 ------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 151 ------------------------PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred ------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 1 137999999999888887644 57999999999544
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.2e-11 Score=99.20 Aligned_cols=159 Identities=12% Similarity=0.054 Sum_probs=117.4
Q ss_pred CCEEEEEcC-chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc------
Q 016370 17 PVTICMIGA-GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------ 89 (390)
Q Consensus 17 ~~~vlItGa-tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------ 89 (390)
.++|||||+ .|-||.+|++++.++ ||.|++..|+-+....+.. ..++..+..|+.+++.+..+..+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~-G~~V~AtaR~~e~M~~L~~------~~gl~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARN-GYLVYATARRLEPMAQLAI------QFGLKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhC-CeEEEEEccccchHhhHHH------hhCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence 468999886 599999999999999 9999999998877666542 25789999999999988776642
Q ss_pred --ccEEEEeccccCC-ccc---cCChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTP-ADY---NTRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 --~d~Vih~a~~~~~-~~~---~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.|+++|.||..-. +-. ....+..+++|+.|..+++++.. +....+|++.|..+|-+..
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp------------ 147 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP------------ 147 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc------------
Confidence 7999999987621 111 12455678899999877776664 3336899999987765431
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh---hhcCccEEEeeccee
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG---AENGLEFTIVRPFNW 215 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i 215 (390)
..+.|..||.+.-.+.+.+. +.+|++++.+-+|.|
T Consensus 148 ---------------------f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv 185 (289)
T KOG1209|consen 148 ---------------------FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGV 185 (289)
T ss_pred ---------------------hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccce
Confidence 33479999999877665542 344677776666554
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.6e-11 Score=100.90 Aligned_cols=217 Identities=18% Similarity=0.185 Sum_probs=143.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+++|++++|||.|-||..+.++|+++ |..+.+++-+.+..+...+...-.....+-++.+|++++.++++++++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~k-gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEK-GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHc-CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999 888888877665554433322222346789999999999999988874
Q ss_pred --ccEEEEeccccCCccccCChhHHHHHhhhh----HHHHHHHHHhC-C---CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADYNTRPLDTIYSNFID----ALPVVKYCSEN-N---KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~----~~~l~~~~~~~-~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.|++||-||... +.+.+..+.+|+.| |...+.+..+. | .-+|.+||. +|-..- |
T Consensus 82 g~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv--~GL~P~-------p--- 145 (261)
T KOG4169|consen 82 GTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV--AGLDPM-------P--- 145 (261)
T ss_pred CceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc--cccCcc-------c---
Confidence 899999999874 45677788888876 44455555433 2 578999985 333210 1
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHH-----HhhhcCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA-----EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~-----~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
-...|+.||.-.-.+-|. +.++.|+++..+.|+.+--
T Consensus 146 ---------------------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t----------------- 187 (261)
T KOG4169|consen 146 ---------------------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT----------------- 187 (261)
T ss_pred ---------------------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchH-----------------
Confidence 112688888776555444 2355688888887765421
Q ss_pred hhHHHHHHHHhc-CCCeEEecC---CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 235 RVLACFSNNLLR-RQPLKLVDG---GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.++ ..+.. +..+..-.. .-.+..--...+++..++.++|.+. .|.+|-+.++
T Consensus 188 ~l~----~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~--NGaiw~v~~g 243 (261)
T KOG4169|consen 188 DLA----ENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK--NGAIWKVDSG 243 (261)
T ss_pred HHH----HHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc--CCcEEEEecC
Confidence 111 11111 111111000 0001122346789999999999964 7888988886
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.6e-10 Score=101.25 Aligned_cols=227 Identities=10% Similarity=0.033 Sum_probs=131.8
Q ss_pred CCCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCCh--------hhhccccccccCCC---------------
Q 016370 13 RPIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYND--------KIKHLLEPESQTGA--------------- 67 (390)
Q Consensus 13 ~~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~--------------- 67 (390)
..+.+|++|||||+ .-||+++++.|.++ |++|++.++.+. ..............
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~-Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEA-GATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHC-CCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 45678999999995 89999999999999 999999765320 00000000000000
Q ss_pred CCeeEEeCCCCC--------hhHHHHhhc-------cccEEEEeccccC---Ccc---ccCChhHHHHHhhhhHHHHHHH
Q 016370 68 DRIQFHRLNIKH--------DSRLEGLIK-------MADLTINLAAICT---PAD---YNTRPLDTIYSNFIDALPVVKY 126 (390)
Q Consensus 68 ~~i~~~~~D~~d--------~~~~~~~~~-------~~d~Vih~a~~~~---~~~---~~~~~~~~~~~nv~~~~~l~~~ 126 (390)
...+-+..|+++ .++++.+++ ++|++||+||... .+. ..++....+++|+.+..+++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a 162 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH 162 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 011122222222 012333332 4899999998642 111 1123455678999999998887
Q ss_pred HHhC---CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-
Q 016370 127 CSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE- 202 (390)
Q Consensus 127 ~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~- 202 (390)
+... +.++|++||..-.... | .....|+.+|...+.+.+.++.+
T Consensus 163 ~~p~m~~~G~ii~iss~~~~~~~---------p-----------------------~~~~~Y~asKaAl~~lt~~la~el 210 (299)
T PRK06300 163 FGPIMNPGGSTISLTYLASMRAV---------P-----------------------GYGGGMSSAKAALESDTKVLAWEA 210 (299)
T ss_pred HHHHhhcCCeEEEEeehhhcCcC---------C-----------------------CccHHHHHHHHHHHHHHHHHHHHh
Confidence 7543 2578888875322111 0 00125999999999888877654
Q ss_pred ---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 203 ---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 203 ---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
+|+++..+.|+.+--+.... .. .............+. ..+...+|+++++.+++...
T Consensus 211 ~~~~gIrVn~V~PG~v~T~~~~~----------~~-~~~~~~~~~~~~~p~---------~r~~~peevA~~v~~L~s~~ 270 (299)
T PRK06300 211 GRRWGIRVNTISAGPLASRAGKA----------IG-FIERMVDYYQDWAPL---------PEPMEAEQVGAAAAFLVSPL 270 (299)
T ss_pred CCCCCeEEEEEEeCCccChhhhc----------cc-ccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc
Confidence 37999999998876553210 00 001111111111111 12456899999999988653
Q ss_pred -CCCCCceEEecCC
Q 016370 280 -ARANGHIFNVGNP 292 (390)
Q Consensus 280 -~~~~~~~~nv~~~ 292 (390)
....++++.+.++
T Consensus 271 ~~~itG~~i~vdGG 284 (299)
T PRK06300 271 ASAITGETLYVDHG 284 (299)
T ss_pred ccCCCCCEEEECCC
Confidence 2245777887764
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.7e-10 Score=97.87 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=122.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+...|-|||||.-.-.|..|+++|.++ |+.|++-...++..+.+..... .++...+..|+++++.++++.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~-Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKK-GFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhc-CCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence 456678999999999999999999999 9999998876666555544321 4688899999999999988875
Q ss_pred ----cccEEEEeccccC---Cccc--cCChhHHHHHhhhhHHHHHHHH----HhCCCcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICT---PADY--NTRPLDTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~---~~~~--~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+--.|||+||+.. +.++ .++....+++|+.|+..+..+. ++...|+|++||..= ..
T Consensus 102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R~--------- 170 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--RV--------- 170 (322)
T ss_pred cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--Cc---------
Confidence 2678999999663 2222 2356678889999977665544 555589999999642 11
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHH---hhhcCccEEEeecce
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE---GAENGLEFTIVRPFN 214 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~~~~ilR~~~ 214 (390)
+. .-..+|..||...|.+...+ .+.+|+++.++-||.
T Consensus 171 ~~----------------------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 171 AL----------------------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred cC----------------------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 00 02347999999999665544 456799999999993
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.3e-10 Score=93.13 Aligned_cols=171 Identities=15% Similarity=0.198 Sum_probs=116.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
|.++.|+||||+--||-.|+++|++..|.++++..++ ++......... ....+++.+++.|+++.+.+.+++.
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k-~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALK-SKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHh-hccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 4567899999999999999999999878887776665 44421111110 0024789999999998887777665
Q ss_pred ----cccEEEEeccccCCccccC-----ChhHHHHHhhhhHHHHHHHH----HhCC-C-----------cEEEeeccccc
Q 016370 89 ----MADLTINLAAICTPADYNT-----RPLDTIYSNFIDALPVVKYC----SENN-K-----------RLIHFSTCEVY 143 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~-----~~~~~~~~nv~~~~~l~~~~----~~~~-~-----------~~v~~Ss~~vy 143 (390)
+.+++|++||......... ...+.+++|..++..+.+++ ++.. + .+|++||.+--
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s 159 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS 159 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence 3799999999885322222 23456778998876665543 2222 2 78889885421
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceec
Q 016370 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWI 216 (390)
Q Consensus 144 ~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~ 216 (390)
.....+ .+..+|..||.+...+.+..+-+. ++-++.+.||+|-
T Consensus 160 -------~~~~~~-----------------------~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 160 -------IGGFRP-----------------------GGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred -------cCCCCC-----------------------cchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 011111 245589999999999888876443 5667778887774
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.5e-10 Score=102.94 Aligned_cols=174 Identities=16% Similarity=0.108 Sum_probs=119.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.++||+|+|++|.||+.++..|...+- .++.+++..+ ......+... . .......++.+.+++.+.++++|+||
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~--~--~~~~~i~~~~~~~d~~~~l~~aDiVV 91 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSH--I--NTPAQVRGFLGDDQLGDALKGADLVI 91 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhh--C--CcCceEEEEeCCCCHHHHcCCCCEEE
Confidence 447999999999999999999987622 4799999876 2111111110 0 11123335445556888999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc--CCCCCCCCCCCCCccccccccCCC
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI--GSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~--~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
|+||....+ .....+.+..|+..++++++.+++++ ..+|+++|--+-+... ...+.+...+
T Consensus 92 itAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~-------------- 155 (323)
T PLN00106 92 IPAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY-------------- 155 (323)
T ss_pred EeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC--------------
Confidence 999986432 34566788899999999999999999 8889888843311000 0000011111
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCC
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~ 219 (390)
.|...||.+++..+++-..+++..+++...++ +.|+|.+
T Consensus 156 --------p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 156 --------DPKKLFGVTTLDVVRANTFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred --------CcceEEEEecchHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence 25568999998899999889999999988886 5666765
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-10 Score=103.03 Aligned_cols=177 Identities=14% Similarity=0.061 Sum_probs=120.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+|+||+|+|++|.||+.++..|..++ ..++.++++...... ..+... ... .....+.+|+.++.+.++++|+|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~-a~Dl~~--~~~--~~~v~~~td~~~~~~~l~gaDvV 80 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV-AADLSH--IDT--PAKVTGYADGELWEKALRGADLV 80 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc-ccchhh--cCc--CceEEEecCCCchHHHhCCCCEE
Confidence 478899999999999999999998651 368999998321111 111100 011 23345566666667888999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCC--CCCCCCCCCCCccccccccCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGS--FLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~--~~~e~~~~~~~~~~~~~~e~~ 170 (390)
|++||.... ...+....+..|+..++++++++++++ +++|+++|..+-....-. .+.+...+
T Consensus 81 VitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~------------- 145 (321)
T PTZ00325 81 LICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVY------------- 145 (321)
T ss_pred EECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCC-------------
Confidence 999997542 233556788899999999999999999 999999996554332110 01122222
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCC
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 221 (390)
.|...||.+-+..-++-...++..++....++ +.|+|.+.+
T Consensus 146 ---------p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 146 ---------DPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred ---------ChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 14456887755555666666777788888888 778887643
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.6e-10 Score=124.98 Aligned_cols=168 Identities=12% Similarity=0.092 Sum_probs=124.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-----h---------h-------------------------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-----I---------K------------------------- 56 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-----~---------~------------------------- 56 (390)
.++++|||||++-||..++++|.++.|++|++++|++.. + +
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 467999999999999999999999867999999997210 0 0
Q ss_pred --------ccccccccCCCCCeeEEeCCCCChhHHHHhhcc------ccEEEEeccccCCcc----ccCChhHHHHHhhh
Q 016370 57 --------HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------ADLTINLAAICTPAD----YNTRPLDTIYSNFI 118 (390)
Q Consensus 57 --------~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~ 118 (390)
..... ....+..+.++.+|++|.+++.+++.. +|.|||+||...... ..++....+++|+.
T Consensus 2076 ~~~~~ei~~~la~-l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAA-FKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHH-HHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 00000 001234678999999999988877753 799999999864321 22344557889999
Q ss_pred hHHHHHHHHHhCC-CcEEEeecccc-cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHH
Q 016370 119 DALPVVKYCSENN-KRLIHFSTCEV-YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196 (390)
Q Consensus 119 ~~~~l~~~~~~~~-~~~v~~Ss~~v-y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~ 196 (390)
|+.++++++.... ++||++||..- ||.. ....|+.+|...+.+.
T Consensus 2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~~----------------------------------gqs~YaaAkaaL~~la 2200 (2582)
T TIGR02813 2155 GLLSLLAALNAENIKLLALFSSAAGFYGNT----------------------------------GQSDYAMSNDILNKAA 2200 (2582)
T ss_pred HHHHHHHHHHHhCCCeEEEEechhhcCCCC----------------------------------CcHHHHHHHHHHHHHH
Confidence 9999999987766 78999999643 3321 2236999999998888
Q ss_pred HHHhhhc-CccEEEeecceecCC
Q 016370 197 YAEGAEN-GLEFTIVRPFNWIGP 218 (390)
Q Consensus 197 ~~~~~~~-~~~~~ilR~~~i~G~ 218 (390)
+.++.+. +++++.+.+|.+-|+
T Consensus 2201 ~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2201 LQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHHHHcCCcEEEEEECCeecCC
Confidence 8877665 688899999877654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.8e-10 Score=90.61 Aligned_cols=223 Identities=16% Similarity=0.188 Sum_probs=151.5
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
++.+.++.|++||+.--||+.++..|.+. |.+|+++.|.+..+..+.+.. ...++.+.+|+.+-+.+.+++..
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~a-GA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKA-GAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhc-CCEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcccC
Confidence 45678899999999999999999999999 999999999998877765532 23489999999998888888775
Q ss_pred -ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 -ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.|.+++.||........ +.....+++|+.+..++.+...+ .+ ..+|.+||.+...+-.
T Consensus 77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~----------- 145 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLD----------- 145 (245)
T ss_pred chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccC-----------
Confidence 79999999987432111 22234566899888777765322 22 5699999965422211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
-++.|..+|.+.+.+-+-++-+. ++++..+.|..+.-.... -+|-.|..
T Consensus 146 ----------------------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~--dnWSDP~K---- 197 (245)
T KOG1207|consen 146 ----------------------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR--DNWSDPDK---- 197 (245)
T ss_pred ----------------------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc--cccCCchh----
Confidence 23479999999988777665544 578888999888765332 00111110
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
...++...| .--|..++.++.+++.++...+. ..|....+.+|
T Consensus 198 -----~k~mL~riP---------l~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 198 -----KKKMLDRIP---------LKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGG 241 (245)
T ss_pred -----ccchhhhCc---------hhhhhHHHHHHhhheeeeecCcCcccCceeeecCC
Confidence 001111212 22377799999999998876532 34455555553
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-09 Score=90.66 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=77.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-------c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-------A 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-------~ 90 (390)
|+++|||||||+|. +++.|.++ |++|++++|++.....+..... ....+..+.+|+.|++++..++++ +
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~-G~~V~v~~R~~~~~~~l~~~l~--~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK-GFHVSVIARREVKLENVKREST--TPESITPLPLDYHDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC-cCEEEEEECCHHHHHHHHHHhh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999886 99999998 9999999998765544332111 124678899999999998887763 5
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C----cEEEeec
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K----RLIHFST 139 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~----~~v~~Ss 139 (390)
|.+|+.+ .+.++.++..+|++.+ + +||++=.
T Consensus 77 d~lv~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g 112 (177)
T PRK08309 77 DLAVAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLG 112 (177)
T ss_pred eEEEEec------------------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence 6777654 3456889999999999 6 7888764
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.7e-09 Score=86.73 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
++++.++||||+|.||..+++.|.++ |++|++++|+.+.......... .....+.++.+|+++.+++.+++.
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQATVEEIT-NLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999998 9999999987654432211110 012356778999999888877553
Q ss_pred -cccEEEEeccccC
Q 016370 89 -MADLTINLAAICT 101 (390)
Q Consensus 89 -~~d~Vih~a~~~~ 101 (390)
++|++||+||...
T Consensus 92 G~iDilVnnAG~~~ 105 (169)
T PRK06720 92 SRIDMLFQNAGLYK 105 (169)
T ss_pred CCCCEEEECCCcCC
Confidence 3899999999765
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.6e-09 Score=95.40 Aligned_cols=100 Identities=24% Similarity=0.292 Sum_probs=83.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|||.|+ |+||+.++..|.+++.++|++.+|+.++....... ...+++....|+.|.+.+.+++++.|+||++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~----~~~~v~~~~vD~~d~~al~~li~~~d~VIn~ 75 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL----IGGKVEALQVDAADVDALVALIKDFDLVINA 75 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh----ccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence 689999998 99999999999999349999999998777665432 1248999999999999999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
+.... ..+++++|.+.|.++|=+|=
T Consensus 76 ~p~~~------------------~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 76 APPFV------------------DLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred CCchh------------------hHHHHHHHHHhCCCEEEccc
Confidence 96431 33788999999877776663
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=90.77 Aligned_cols=169 Identities=11% Similarity=0.135 Sum_probs=117.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH----HHHhhcc--cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR----LEGLIKM--AD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~----~~~~~~~--~d 91 (390)
.=..|||||.-||+..+++|.++ |++|++++|+.+++....++......-.++++..|+++.+. +.+.+.+ +.
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkr-G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKR-GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 45899999999999999999999 99999999999998887766555455668889999987654 4444444 88
Q ss_pred EEEEeccccC--CccccCChh----HHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 92 LTINLAAICT--PADYNTRPL----DTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 92 ~Vih~a~~~~--~~~~~~~~~----~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
++||++|... |....+.+. ..+.+|+.++..+.+. +.+.+ .-+|++||..---+ .
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p-----------~--- 194 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP-----------T--- 194 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc-----------C---
Confidence 9999999875 222222222 2344677775544443 33444 68999998532110 0
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCC
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~ 220 (390)
.-.+.|+.+|...+.+-..+..++ |+.+-.+-|..|-.+..
T Consensus 195 -------------------p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 195 -------------------PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred -------------------hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 022479999998776666555444 78888888877776643
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.9e-08 Score=92.92 Aligned_cols=119 Identities=16% Similarity=0.062 Sum_probs=80.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC------CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET------PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+.||+||||+|+||++++..|+..+ +.+|+++++.+.... +.. ...+..+.......|+....++.+.++++
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~-~~g-~~~Dl~d~~~~~~~~~~~~~~~~~~l~~a 79 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKA-LEG-VVMELQDCAFPLLKSVVATTDPEEAFKDV 79 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccc-ccc-eeeehhhccccccCCceecCCHHHHhCCC
Confidence 4689999999999999999999852 358999999653211 100 00001111112233555456777888999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeec
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFST 139 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss 139 (390)
|+|||+||.... ...+....++.|+.-.+.+.....++. ..+|.+|.
T Consensus 80 DiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 80 DVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred CEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 999999998643 234567888999999999988887773 44555553
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.4e-08 Score=87.26 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCc----------------hhHHHHHHHHHHhhCCCeEEEEecCChhhhc-cccccccCCCCCeeEEeCCC
Q 016370 15 IKPVTICMIGAG----------------GFIGSHLCEKILLETPHKILALDVYNDKIKH-LLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 15 ~~~~~vlItGat----------------G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~i~~~~~D~ 77 (390)
+.+|+||||+|. ||+|++|++.|+++ |++|+++++....... ... ...+..+.++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~-Ga~V~li~g~~~~~~~~~~~------~~~~~~V~s~~ 73 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK-GAHVIYLHGYFAEKPNDINN------QLELHPFEGII 73 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC-CCeEEEEeCCCcCCCcccCC------ceeEEEEecHH
Confidence 468899999886 99999999999999 9999999875321111 100 11234456644
Q ss_pred CChhHHHHhhc--cccEEEEeccccC
Q 016370 78 KHDSRLEGLIK--MADLTINLAAICT 101 (390)
Q Consensus 78 ~d~~~~~~~~~--~~d~Vih~a~~~~ 101 (390)
...+.+.+++. ++|+|||+||..+
T Consensus 74 d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 74 DLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHHHhcccCCCEEEECccccc
Confidence 44467788885 5999999999875
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.2e-08 Score=79.50 Aligned_cols=217 Identities=17% Similarity=0.237 Sum_probs=138.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
..++-..|||||..-+|...++.|.++ |..|.+++...++-....+. .+.++-+...|++++.++..++.
T Consensus 6 s~kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vake----lg~~~vf~padvtsekdv~aala~ak~k 80 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKE----LGGKVVFTPADVTSEKDVRAALAKAKAK 80 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHH----hCCceEEeccccCcHHHHHHHHHHHHhh
Confidence 446677999999999999999999999 99999999877654443322 35788999999999998988775
Q ss_pred --cccEEEEeccccCCc----------cccCChhHHHHHhhhhHHHHHHHHH---------hCCCc--EEEeeccccccc
Q 016370 89 --MADLTINLAAICTPA----------DYNTRPLDTIYSNFIDALPVVKYCS---------ENNKR--LIHFSTCEVYGK 145 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~---------~~~~~--~v~~Ss~~vy~~ 145 (390)
..|+.++|||..... ...++....+++|+.||.|++.... +.|.| +|.+.|...|..
T Consensus 81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg 160 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG 160 (260)
T ss_pred ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence 289999999976311 1112223345579999999987543 12233 555555555544
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHH----HHHHHhhhcCccEEEeecceecCCCCC
Q 016370 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER----LIYAEGAENGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 146 ~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~----~~~~~~~~~~~~~~ilR~~~i~G~~~~ 221 (390)
..+ ...|..||...-- +.+++ ...|++++.+-|+.+--|-..
T Consensus 161 q~g---------------------------------qaaysaskgaivgmtlpiardl-a~~gir~~tiapglf~tplls 206 (260)
T KOG1199|consen 161 QTG---------------------------------QAAYSASKGAIVGMTLPIARDL-AGDGIRFNTIAPGLFDTPLLS 206 (260)
T ss_pred ccc---------------------------------hhhhhcccCceEeeechhhhhc-ccCceEEEeecccccCChhhh
Confidence 322 2367777765432 22333 234788888888766444321
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 222 FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
++-......+....|++-. +=|..+-+..+..+++++- ..++++-+.+
T Consensus 207 -------------slpekv~~fla~~ipfpsr--------lg~p~eyahlvqaiienp~-lngevir~dg 254 (260)
T KOG1199|consen 207 -------------SLPEKVKSFLAQLIPFPSR--------LGHPHEYAHLVQAIIENPY-LNGEVIRFDG 254 (260)
T ss_pred -------------hhhHHHHHHHHHhCCCchh--------cCChHHHHHHHHHHHhCcc-cCCeEEEecc
Confidence 2222222222233333321 2235567777888888874 4566666654
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.1e-08 Score=90.42 Aligned_cols=169 Identities=17% Similarity=0.078 Sum_probs=112.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-------eEEEEecCChh--hhcc-ccccccC--CCCCeeEEeCCCCChhHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-------KILALDVYNDK--IKHL-LEPESQT--GADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~--~~~~-~~~~~~~--~~~~i~~~~~D~~d~~~~ 83 (390)
+++||.|+|++|.||++++..|... +. ++++++..+.. .... .+..... ....+.+ . ...
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~-~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~ 72 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASG-EMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDP 72 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhc-cccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCc
Confidence 3579999999999999999999986 53 68999885432 1111 1110000 0011211 1 123
Q ss_pred HHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecc---cccccccCCCCCCCCCC
Q 016370 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTC---EVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 84 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~---~vy~~~~~~~~~e~~~~ 157 (390)
.+.++++|+||.+||.... ...+..+.+..|+.-.+.+.....+++ ..+|.+|.. -+|-.. +..+
T Consensus 73 ~~~~~daDivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~------k~sg- 143 (322)
T cd01338 73 NVAFKDADWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM------KNAP- 143 (322)
T ss_pred HHHhCCCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH------HHcC-
Confidence 4667889999999997642 344667788999999999999887765 355555531 011000 0010
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 221 (390)
...+...||.+++..+++...+++..+++...+|...|||++..
T Consensus 144 --------------------~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 144 --------------------DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred --------------------CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 01245579999999999999999999999999998899999743
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-07 Score=89.54 Aligned_cols=97 Identities=25% Similarity=0.373 Sum_probs=73.6
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEecc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAA 98 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~ 98 (390)
|+|.|| |++|+.+++.|.+...+ +|++.+|+....+.+.... ...+++.+..|+.|.+++.++++++|+||||++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLRGCDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHhcCCEEEECCc
Confidence 799999 99999999999998556 8999999988766654321 146899999999999999999999999999997
Q ss_pred ccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEee
Q 016370 99 ICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138 (390)
Q Consensus 99 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~S 138 (390)
.. ....++++|.+.|.++|-+|
T Consensus 77 p~------------------~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 77 PF------------------FGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp GG------------------GHHHHHHHHHHHT-EEEESS
T ss_pred cc------------------hhHHHHHHHHHhCCCeeccc
Confidence 43 14467888888887776644
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.2e-07 Score=64.35 Aligned_cols=57 Identities=23% Similarity=0.400 Sum_probs=34.7
Q ss_pred HHHHhhcccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 305 MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 305 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
+.++.|++.+....+ .+.++....++|++|++++|||+|+++++++++++.+|+++|
T Consensus 2 ~e~vtG~~i~~~~~~-------------rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n 58 (62)
T PF13950_consen 2 FEKVTGKKIPVEYAP-------------RRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN 58 (62)
T ss_dssp HHHHHTS---EEEE----------------TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred cHHHHCCCCCceECC-------------CCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence 556667655443332 344777888999999999999999999999999999999876
|
... |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.7e-07 Score=79.42 Aligned_cols=94 Identities=10% Similarity=0.071 Sum_probs=71.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+|||+||||. |+.|++.|.+. |++|++..+++.....+.. .+...+..+..|.+.+.+++++ +|+|||
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~-g~~v~~s~~t~~~~~~~~~-------~g~~~v~~g~l~~~~l~~~l~~~~i~~VID 71 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ-GIEILVTVTTSEGKHLYPI-------HQALTVHTGALDPQELREFLKRHSIDILVD 71 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCccccccc-------cCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence 68999999999 99999999998 8999999998765444332 2233455666777889888875 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEE
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v 135 (390)
++-.. . ...+.++.++|++.+..++
T Consensus 72 AtHPf-------------A--~~is~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 72 ATHPF-------------A--AQITTNATAVCKELGIPYV 96 (256)
T ss_pred cCCHH-------------H--HHHHHHHHHHHHHhCCcEE
Confidence 87432 1 2347889999999984444
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.9e-07 Score=80.02 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=54.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC--hhHHHHhhcccc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH--DSRLEGLIKMAD 91 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d--~~~~~~~~~~~d 91 (390)
++++.+++=-.+|||+|++|++.|+++ |++|+++.|....... ...+++++.++-.+ .+.+.+.+.++|
T Consensus 13 ~iD~VR~itN~SSG~iG~aLA~~L~~~-G~~V~li~r~~~~~~~--------~~~~v~~i~v~s~~~m~~~l~~~~~~~D 83 (229)
T PRK06732 13 PIDSVRGITNHSTGQLGKIIAETFLAA-GHEVTLVTTKTAVKPE--------PHPNLSIIEIENVDDLLETLEPLVKDHD 83 (229)
T ss_pred ccCCceeecCccchHHHHHHHHHHHhC-CCEEEEEECcccccCC--------CCCCeEEEEEecHHHHHHHHHHHhcCCC
Confidence 445555555577999999999999999 9999999876421110 01356666644332 245666677899
Q ss_pred EEEEeccccC
Q 016370 92 LTINLAAICT 101 (390)
Q Consensus 92 ~Vih~a~~~~ 101 (390)
+|||+||..+
T Consensus 84 ivIh~AAvsd 93 (229)
T PRK06732 84 VLIHSMAVSD 93 (229)
T ss_pred EEEeCCccCC
Confidence 9999999864
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.6e-07 Score=76.03 Aligned_cols=208 Identities=13% Similarity=0.056 Sum_probs=128.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCe--EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHK--ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+-|||||+|--||..++..+..+ +-+ +++..|.....+.+.-. ......+..+|+.....+.++.+
T Consensus 7 ~villTGaSrgiG~~~v~~i~ae-d~e~~r~g~~r~~a~~~~L~v~----~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAE-DDEALRYGVARLLAELEGLKVA----YGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhc-chHHHHHhhhcccccccceEEE----ecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 45999999999999999999987 544 45555555443322211 12334455667766655554443
Q ss_pred cccEEEEeccccCCcc-------ccCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 MADLTINLAAICTPAD-------YNTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+-|.|||.||...+.. .......+++.|+.+...|...+.. .. +-+|++||.+...+-.
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~-------- 153 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFS-------- 153 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcccc--------
Confidence 2799999999885421 1124567888999998888776643 21 5689999854322110
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.-..|+.+|.+.+.+++..+.+- ++.+..++||.+=-+..-.+.+ ...+
T Consensus 154 -------------------------~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~----~~~~ 204 (253)
T KOG1204|consen 154 -------------------------SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRE----TSRM 204 (253)
T ss_pred -------------------------HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhh----ccCC
Confidence 11269999999999999886443 7889999998874443211000 0111
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.+-...++..++... .++.-.+.|+.+..++++.
T Consensus 205 ~p~~l~~f~el~~~~------------~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 205 TPADLKMFKELKESG------------QLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred CHHHHHHHHHHHhcC------------CcCChhhHHHHHHHHHHhc
Confidence 222222333332222 2445667888888888875
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-05 Score=74.51 Aligned_cols=82 Identities=13% Similarity=0.037 Sum_probs=59.0
Q ss_pred CCCEEEEEcCchhHHHH--HHHHHHhhCCCeEEEEecCChhhh------------ccccccccCCCCCeeEEeCCCCChh
Q 016370 16 KPVTICMIGAGGFIGSH--LCEKILLETPHKILALDVYNDKIK------------HLLEPESQTGADRIQFHRLNIKHDS 81 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~--l~~~L~~~~g~~V~~~~r~~~~~~------------~~~~~~~~~~~~~i~~~~~D~~d~~ 81 (390)
.+|++|||||++-+|.+ +++.| +. |.+|+++++...... .+.+.. ...+..+..+.+|+++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~-GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a-~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA-GADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA-KAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc-CCeEEEEecCcchhhhcccccccchHHHHHHHH-HhcCCceEEEEcCCCCHH
Confidence 46899999999999999 89999 77 999888875321111 111110 111234667899999988
Q ss_pred HHHHhhc-------cccEEEEecccc
Q 016370 82 RLEGLIK-------MADLTINLAAIC 100 (390)
Q Consensus 82 ~~~~~~~-------~~d~Vih~a~~~ 100 (390)
.+.+++. ++|+|||++|..
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 8776665 389999999977
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.1e-06 Score=79.03 Aligned_cols=115 Identities=14% Similarity=0.050 Sum_probs=79.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|||+|+||+|.||++++..|... .++++.++++.+.......+.. .......+.+ .+.+++.+.++++|+||.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~---~~~~~~~i~~--~~~~d~~~~l~~~DiVIi 75 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLS---HIPTAVKIKG--FSGEDPTPALEGADVVLI 75 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhh---cCCCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence 69999999999999999988552 2467888888643211011110 0111122333 223455667788999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
++|.... ...+....+..|....+++++.+++++ +++|.+.|
T Consensus 76 taG~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 76 SAGVARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9998642 234566788899999999999999999 88888887
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-06 Score=75.26 Aligned_cols=83 Identities=14% Similarity=0.144 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+++++++|+||+|.+|+.+++.|.+. |++|+++.|+....+.+...... ..+.++..+|..+.+++.+++.++|+|
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~diV 101 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRA--RFGEGVGAVETSDDAARAAAIKGADVV 101 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh--hcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence 456789999999999999999999998 89999999987655443321110 113456677888989899999999999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|++...
T Consensus 102 i~at~~ 107 (194)
T cd01078 102 FAAGAA 107 (194)
T ss_pred EECCCC
Confidence 997653
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.35 E-value=4e-06 Score=77.36 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=74.4
Q ss_pred EEEEEcCchhHHHHHHHHHHhhC------CCeEEEEecCC--hhhhccccccccCCCCCeeEEeCCCCCh----------
Q 016370 19 TICMIGAGGFIGSHLCEKILLET------PHKILALDVYN--DKIKHLLEPESQTGADRIQFHRLNIKHD---------- 80 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~------g~~V~~~~r~~--~~~~~~~~~~~~~~~~~i~~~~~D~~d~---------- 80 (390)
||.|+||+|.||++++..|...+ .++++++++.+ +... ....|+.|.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~---------------g~~~Dl~d~~~~~~~~~~i 66 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE---------------GVVMELQDCAFPLLKGVVI 66 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc---------------eeeeehhhhcccccCCcEE
Confidence 79999999999999999999752 12589999876 2211 112222221
Q ss_pred -hHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C--CcEEEee
Q 016370 81 -SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N--KRLIHFS 138 (390)
Q Consensus 81 -~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~--~~~v~~S 138 (390)
....+.++++|+|||+||.... ...+..+.+..|+.-.+.+....+++ + ..+|.+|
T Consensus 67 ~~~~~~~~~~aDiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 67 TTDPEEAFKDVDVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred ecChHHHhCCCCEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 3456788899999999997643 34466678889999999999988888 4 4555555
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.8e-06 Score=79.45 Aligned_cols=75 Identities=23% Similarity=0.351 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+.+++|+||||+|+||+.++++|.++.| .+++++.|+......+... +..+++. .+.+++.++|+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e----------l~~~~i~---~l~~~l~~aDi 218 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE----------LGGGKIL---SLEEALPEADI 218 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH----------hccccHH---hHHHHHccCCE
Confidence 46779999999999999999999986524 6899999876655443221 1123333 46688889999
Q ss_pred EEEeccccC
Q 016370 93 TINLAAICT 101 (390)
Q Consensus 93 Vih~a~~~~ 101 (390)
|||+++...
T Consensus 219 Vv~~ts~~~ 227 (340)
T PRK14982 219 VVWVASMPK 227 (340)
T ss_pred EEECCcCCc
Confidence 999998653
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.3e-06 Score=78.43 Aligned_cols=81 Identities=16% Similarity=0.292 Sum_probs=66.9
Q ss_pred EEEEEcCchhHHHHHHHHHHhh---CCCeEEEEecCChhhhccccccccCC----CCCeeEEeCCCCChhHHHHhhcccc
Q 016370 19 TICMIGAGGFIGSHLCEKILLE---TPHKILALDVYNDKIKHLLEPESQTG----ADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~---~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
.++|.|||||.|.++++++++. .+..+-+..|++.+++..++...+.. ...+ ++.+|..|++.+.+..+++-
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhhE
Confidence 4899999999999999999982 27889999999988776655433322 2344 88999999999999999999
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
+|+||+|..
T Consensus 86 vivN~vGPy 94 (423)
T KOG2733|consen 86 VIVNCVGPY 94 (423)
T ss_pred EEEeccccc
Confidence 999999965
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.4e-06 Score=78.13 Aligned_cols=105 Identities=9% Similarity=0.077 Sum_probs=69.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH-hhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG-LIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~-~~~~~d~Vi 94 (390)
.+|||.|.||||++|..|++.|.++++++|..+.+..+..+.+... ......+|+.+.+.++. .++++|+||
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~-------~~~l~~~~~~~~~~~~~~~~~~~DvVf 109 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV-------FPHLITQDLPNLVAVKDADFSDVDAVF 109 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh-------CccccCccccceecCCHHHhcCCCEEE
Confidence 4569999999999999999999999889999998865433222111 11222244443333332 257899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
-+.+.. ....++..+ +.++++|-.|+..-+.+.
T Consensus 110 ~Alp~~------------------~s~~i~~~~-~~g~~VIDlSs~fRl~~~ 142 (381)
T PLN02968 110 CCLPHG------------------TTQEIIKAL-PKDLKIVDLSADFRLRDI 142 (381)
T ss_pred EcCCHH------------------HHHHHHHHH-hCCCEEEEcCchhccCCc
Confidence 876421 355666665 346899999997765543
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.9e-06 Score=78.83 Aligned_cols=76 Identities=12% Similarity=0.187 Sum_probs=60.2
Q ss_pred CCCCCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCC
Q 016370 13 RPIKPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76 (390)
Q Consensus 13 ~~~~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D 76 (390)
..+.+|+|||||| +|.+|.++++.|.++ |++|+++++..+ .. . ..+ +...|
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~-Ga~V~~v~~~~~-~~---~------~~~--~~~~d 250 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR-GADVTLVSGPVN-LP---T------PAG--VKRID 250 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC-CCEEEEeCCCcc-cc---C------CCC--cEEEc
Confidence 4578899999999 999999999999999 999999988652 11 0 122 34568
Q ss_pred CCChhHHHHhhc----cccEEEEeccccC
Q 016370 77 IKHDSRLEGLIK----MADLTINLAAICT 101 (390)
Q Consensus 77 ~~d~~~~~~~~~----~~d~Vih~a~~~~ 101 (390)
+++.+++.+++. .+|++||+||...
T Consensus 251 v~~~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 251 VESAQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred cCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence 888877776664 4899999999874
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.6e-05 Score=73.37 Aligned_cols=106 Identities=14% Similarity=0.064 Sum_probs=74.0
Q ss_pred EEEEEcCchhHHHHHHHHHHhhC------CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh-----------
Q 016370 19 TICMIGAGGFIGSHLCEKILLET------PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS----------- 81 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~----------- 81 (390)
+|.|+|++|.||++++..|...+ .++++++++.+.... .+-...|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-------------a~g~~~Dl~d~~~~~~~~~~~~~ 67 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-------------LEGVVMELMDCAFPLLDGVVPTH 67 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-------------cceeEeehhcccchhcCceeccC
Confidence 58999999999999999998741 226999998654211 111222333222
Q ss_pred HHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C--CcEEEeec
Q 016370 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N--KRLIHFST 139 (390)
Q Consensus 82 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~--~~~v~~Ss 139 (390)
...+.++++|+|||+||.... ...+....+..|+.-.+.+.....++ + ..+|.+|-
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 345677889999999997642 23346678889999999999998887 3 45555553
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.8e-05 Score=59.81 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=57.4
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
||.|+||||++|+.|++.|.+.+.+++..+..++. ....+...... ..........+ .+.+. +.++|+||.|.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~-~~~~~----~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPH-PKGFEDLSVED-ADPEE----LSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGG-GTTTEEEBEEE-TSGHH----HTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccc-cccccceeEee-cchhH----hhcCCEEEecC
Confidence 69999999999999999999987888666554443 22222211000 00111111112 23332 26799999987
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
... .+..+...+.+.|.++|=.|+.
T Consensus 75 ~~~------------------~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 75 PHG------------------ASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp CHH------------------HHHHHHHHHHHTTSEEEESSST
T ss_pred chh------------------HHHHHHHHHhhCCcEEEeCCHH
Confidence 421 1455666666777777766664
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.01 E-value=5.3e-06 Score=67.04 Aligned_cols=112 Identities=18% Similarity=0.203 Sum_probs=74.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccc-cccccC--CCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLL-EPESQT--GADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~-~~~~~~--~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|||.|+|++|.+|++++..|...+ ..+++++++.+...+... +..... ......+.. ...+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-------~~~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-------GDYEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-------SSGGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-------ccccccccccEE
Confidence 699999999999999999999972 257999999865332211 100000 001222222 223346689999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|-+||... .......+.+..|..-.+.+.+...+.+ ..++.+|
T Consensus 74 vitag~~~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 74 VITAGVPR--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EETTSTSS--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEeccccc--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99999753 2334566788899999999999998888 4455554
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.5e-05 Score=80.65 Aligned_cols=99 Identities=20% Similarity=0.288 Sum_probs=75.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe-------------EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK-------------ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~ 82 (390)
++++|+|.|+ |++|+..++.|.+.++++ |.+.++.....+.+... .++++.+..|+.|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~-----~~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG-----IENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh-----cCCCceEEeecCCHHH
Confidence 5789999996 999999999999875655 77788776655544331 1367789999999999
Q ss_pred HHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEee
Q 016370 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138 (390)
Q Consensus 83 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~S 138 (390)
+.++++++|+||.+.-... ...++++|.+.|++++..|
T Consensus 642 L~~~v~~~DaVIsalP~~~------------------H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPASC------------------HAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred HHHhhcCCCEEEECCCchh------------------hHHHHHHHHHcCCCEEECc
Confidence 9999999999999974321 2356677777777776665
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00099 Score=56.86 Aligned_cols=225 Identities=12% Similarity=0.110 Sum_probs=127.9
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
.+.+|++||+|-. --|+..+++.|.++ |.++......+.-.++..+.... ....-+++||+.+.+.+.+++..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~-GAeL~fTy~~e~l~krv~~la~~--~~s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQ-GAELAFTYQGERLEKRVEELAEE--LGSDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHHHhh--ccCCeEEecCCCCHHHHHHHHHHHH
Confidence 4678999999975 46999999999999 99987776655322222221111 12345789999999988888863
Q ss_pred -----ccEEEEeccccCCcccc----CChhH----HHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 90 -----ADLTINLAAICTPADYN----TRPLD----TIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~~~~----~~~~~----~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.|.++|+.+...-.... +...+ ..++...+...+.++++.. |..+|-++ |-...
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~------ 149 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSE------ 149 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccce------
Confidence 89999999977421111 11122 2223333444455555432 13344333 21110
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeeccee-cCCCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNW-IGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i-~G~~~~~~~~~~~~~~~ 232 (390)
..- +-.|.-|.+|...|.-++.++...|-+ -+|...| -||=... ...+
T Consensus 150 r~v-----------------------PnYNvMGvAKAaLEasvRyLA~dlG~~--gIRVNaISAGPIrTL------Aasg 198 (259)
T COG0623 150 RVV-----------------------PNYNVMGVAKAALEASVRYLAADLGKE--GIRVNAISAGPIRTL------AASG 198 (259)
T ss_pred eec-----------------------CCCchhHHHHHHHHHHHHHHHHHhCcc--CeEEeeecccchHHH------Hhhc
Confidence 000 023468999999999999888766533 3444443 3442221 0011
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+.. +..++......-| .+..+.++|+....+.++..-. ...|++.+|.+|
T Consensus 199 I~~-f~~~l~~~e~~aP---------l~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G 249 (259)
T COG0623 199 IGD-FRKMLKENEANAP---------LRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG 249 (259)
T ss_pred ccc-HHHHHHHHHhhCC---------ccCCCCHHHhhhhHHHHhcchhcccccceEEEcCC
Confidence 111 2223322222222 2334568888888777776532 246788888775
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.2e-05 Score=68.88 Aligned_cols=115 Identities=22% Similarity=0.178 Sum_probs=73.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCC--hhhhcccc-ccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDVYN--DKIKHLLE-PESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~--~~~~~~~~-~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|++|++|.+++..|... |+ +|+++++.+ +....... ........+.. ..+.-..+.. .++++|+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~-g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~---~~i~~~~d~~-~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKE-DVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID---AEIKISSDLS-DVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCEEEEEECcccccccccccchhhhchhccCCC---cEEEECCCHH-HhCCCCE
Confidence 68999999999999999999998 64 599999954 22211110 00000000110 0111111233 4789999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||-++|... ....+....+..|+...+.+++...+.+ ..+|.+++
T Consensus 76 Viitag~p~--~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 76 VIITAGVPR--KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred EEEecCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999998753 2223445677889999999998887776 56777765
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.5e-05 Score=70.73 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=64.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEE-eCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH-RLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~-~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|++|+|+||||++|+.+++.|.+.+++++.++.++.+..+.+.+. ...+..+ ..++.+.+.. ...++|+||-
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~-----~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~ 74 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDV-----HPHLRGLVDLVLEPLDPE--ILAGADVVFL 74 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHh-----CcccccccCceeecCCHH--HhcCCCEEEE
Confidence 579999999999999999999998789987776643322211110 0111111 1233333332 4467999998
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
|.... ....++..+.+.|+++|=.|+..-+
T Consensus 75 alP~~------------------~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 75 ALPHG------------------VSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred CCCcH------------------HHHHHHHHHHhCCCEEEECCcccCC
Confidence 76321 1345566666677889999986544
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.4e-05 Score=71.56 Aligned_cols=106 Identities=9% Similarity=0.131 Sum_probs=73.6
Q ss_pred CCCCCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCC
Q 016370 13 RPIKPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76 (390)
Q Consensus 13 ~~~~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D 76 (390)
.++++++|||||| ||.+|..+++.|..+ |++|+++.+...... ...+ ...|
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~-Ga~V~~~~g~~~~~~----------~~~~--~~~~ 247 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR-GADVTLITGPVSLLT----------PPGV--KSIK 247 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC-CCEEEEeCCCCccCC----------CCCc--EEEE
Confidence 3578999999999 478999999999999 999999887653210 1222 4568
Q ss_pred CCChhHH-HHhh----ccccEEEEeccccCCcccc--CC----hhHHHHHhhhhHHHHHHHHHhCC
Q 016370 77 IKHDSRL-EGLI----KMADLTINLAAICTPADYN--TR----PLDTIYSNFIDALPVVKYCSENN 131 (390)
Q Consensus 77 ~~d~~~~-~~~~----~~~d~Vih~a~~~~~~~~~--~~----~~~~~~~nv~~~~~l~~~~~~~~ 131 (390)
+.+.+++ +.++ .++|++|++||..+..... .. ....+..|+.-+..+++..++..
T Consensus 248 v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 248 VSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred eccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 8887777 5444 3489999999998532111 00 01223467777888888777654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=7.4e-05 Score=69.64 Aligned_cols=94 Identities=13% Similarity=0.056 Sum_probs=60.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC---eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH---KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
||+|+|.||||++|+.|++.|.++ +| ++..+.+..+..+.+.- .+.+....|+.+. .+.++|+|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~-~hp~~~l~~l~s~~~~g~~l~~-------~g~~i~v~d~~~~-----~~~~vDvV 67 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEER-NFPVDKLRLLASARSAGKELSF-------KGKELKVEDLTTF-----DFSGVDIA 67 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCcceEEEEEccccCCCeeee-------CCceeEEeeCCHH-----HHcCCCEE
Confidence 579999999999999999999986 54 55777766543332211 1234444555432 23579999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
|-+++.. .+..++....+.|.++|=.|+..
T Consensus 68 f~A~g~g------------------~s~~~~~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 68 LFSAGGS------------------VSKKYAPKAAAAGAVVIDNSSAF 97 (334)
T ss_pred EECCChH------------------HHHHHHHHHHhCCCEEEECCchh
Confidence 9887532 14445555555666666667654
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.83 E-value=8.9e-05 Score=58.48 Aligned_cols=96 Identities=21% Similarity=0.266 Sum_probs=60.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhc--cccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKH--LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~--~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|||+|.|++|-+|+.+++.+++.+++++.+. +|.++.... .... .+.. ...+.-.+++++++..+|+||
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~------~~~~--~~~~~v~~~l~~~~~~~DVvI 72 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGEL------AGIG--PLGVPVTDDLEELLEEADVVI 72 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHH------CTSS--T-SSBEBS-HHHHTTH-SEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhh------hCcC--CcccccchhHHHhcccCCEEE
Confidence 6899999999999999999999768996654 555422211 0000 0001 122222367888888899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
++.. -..+...++.|.+++..+|.-.|
T Consensus 73 DfT~------------------p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 73 DFTN------------------PDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp EES-------------------HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred EcCC------------------hHHhHHHHHHHHhCCCCEEEECC
Confidence 9872 22355677888888877776555
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.82 E-value=8.2e-05 Score=62.74 Aligned_cols=75 Identities=16% Similarity=0.217 Sum_probs=47.6
Q ss_pred CCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC
Q 016370 16 KPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79 (390)
Q Consensus 16 ~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d 79 (390)
.+|+||||+| ||-.|..|++.+..+ |++|+.+....+ .. ...+++.+...-.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~-Ga~V~li~g~~~-~~---------~p~~~~~i~v~sa~ 70 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARR-GAEVTLIHGPSS-LP---------PPPGVKVIRVESAE 70 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHT-T-EEEEEE-TTS--------------TTEEEEE-SSHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHC-CCEEEEEecCcc-cc---------ccccceEEEecchh
Confidence 5677888776 799999999999999 999999988642 11 02467666644332
Q ss_pred --hhHHHHhhccccEEEEeccccC
Q 016370 80 --DSRLEGLIKMADLTINLAAICT 101 (390)
Q Consensus 80 --~~~~~~~~~~~d~Vih~a~~~~ 101 (390)
.+.+.+.+.+.|++||+|+..+
T Consensus 71 em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 71 EMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHHHGGGGSEEEE-SB--S
T ss_pred hhhhhhccccCcceeEEEecchhh
Confidence 2344555566999999999885
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.82 E-value=5.7e-05 Score=70.66 Aligned_cols=102 Identities=17% Similarity=0.147 Sum_probs=62.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEE-eCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFH-RLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~-~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|+|.|.||||++|..+++.|.+.+++++..+ +++.+..+.+... .+.+... ..++.+. +..+++.++|+||-
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~-----~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~ 74 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEV-----HPHLRGLVDLNLEPI-DEEEIAEDADVVFL 74 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHh-----CccccccCCceeecC-CHHHhhcCCCEEEE
Confidence 5899999999999999999999888898854 5443222211110 0111111 1112211 23344457999998
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
|.... ....++..+.+.|+++|=.|+..=+
T Consensus 75 alP~~------------------~s~~~~~~~~~~G~~VIDlS~~fR~ 104 (346)
T TIGR01850 75 ALPHG------------------VSAELAPELLAAGVKVIDLSADFRL 104 (346)
T ss_pred CCCch------------------HHHHHHHHHHhCCCEEEeCChhhhc
Confidence 87421 2456666666677899999986543
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00022 Score=61.54 Aligned_cols=83 Identities=13% Similarity=0.112 Sum_probs=59.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC----CeEEEEecCChhhhccccccccC---CCCCeeEEeCCCCChhHHHHhhc--
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP----HKILALDVYNDKIKHLLEPESQT---GADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~~---~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
|-+||||++..+|-+|+.+|++... ..+.+..|+.++.+......... ....++++..|+++...+.++.+
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di 83 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI 83 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence 4699999999999999999999622 23566678766655443222111 12468889999998777666554
Q ss_pred -----cccEEEEecccc
Q 016370 89 -----MADLTINLAAIC 100 (390)
Q Consensus 89 -----~~d~Vih~a~~~ 100 (390)
..|.|+-.||..
T Consensus 84 ~~rf~~ld~iylNAg~~ 100 (341)
T KOG1478|consen 84 KQRFQRLDYIYLNAGIM 100 (341)
T ss_pred HHHhhhccEEEEccccC
Confidence 379999999876
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00023 Score=65.21 Aligned_cols=114 Identities=16% Similarity=0.119 Sum_probs=76.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|||.|+|++|.||++++..|... + .++.+++.. .......++.. ......+.. ....+++.+.++++|+||-
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~-~~~~elvLiDi~-~a~g~alDL~~--~~~~~~i~~--~~~~~~~y~~~~daDivvi 74 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLN-PLVSELALYDIV-NTPGVAADLSH--INTPAKVTG--YLGPEELKKALKGADVVVI 74 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCcEEEEEecC-ccceeehHhHh--CCCcceEEE--ecCCCchHHhcCCCCEEEE
Confidence 68999999999999999999887 5 578888886 11111111100 001111111 1012336677889999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+||... ....+..+.+..|..-.+.+++...+++ ..+|.+|-
T Consensus 75 taG~~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 75 PAGVPR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred eCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 999753 2345677888999999999999988888 56666664
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00021 Score=67.15 Aligned_cols=38 Identities=16% Similarity=0.345 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
|.++||+|+||||++|+.|++.|.+.+..++.++.++.
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 34579999999999999999999988677988885544
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00011 Score=67.08 Aligned_cols=83 Identities=17% Similarity=0.270 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCC---hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYN---DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~---~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+++++++|+|| |-+|++++..|.+. |++ |++++|+. +..+.+.+.... ....+.+...|+.+.+++...+..+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~~ 200 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQ-EVPECIVNVYDLNDTEKLKAEIASS 200 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhh-cCCCceeEEechhhhhHHHhhhccC
Confidence 56789999998 79999999999998 876 99999986 333333221111 1123455667888888888888889
Q ss_pred cEEEEecccc
Q 016370 91 DLTINLAAIC 100 (390)
Q Consensus 91 d~Vih~a~~~ 100 (390)
|+|||+....
T Consensus 201 DilINaTp~G 210 (289)
T PRK12548 201 DILVNATLVG 210 (289)
T ss_pred CEEEEeCCCC
Confidence 9999987543
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00022 Score=63.90 Aligned_cols=89 Identities=20% Similarity=0.278 Sum_probs=60.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+|+|+|++|.+|+.+++.+.+.+++++.++ ++.++..... -..++...+++.+++.++|+||+
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--------------~~~~i~~~~dl~~ll~~~DvVid 66 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--------------GALGVAITDDLEAVLADADVLID 66 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--------------CCCCccccCCHHHhccCCCEEEE
Confidence 47999999999999999999987667887774 4443322111 11233344557777778999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEe
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~ 137 (390)
++... ....++..|.+.|+++|.-
T Consensus 67 ~t~p~------------------~~~~~~~~al~~G~~vvig 90 (257)
T PRK00048 67 FTTPE------------------ATLENLEFALEHGKPLVIG 90 (257)
T ss_pred CCCHH------------------HHHHHHHHHHHcCCCEEEE
Confidence 87321 1345667777888777743
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00052 Score=63.92 Aligned_cols=113 Identities=21% Similarity=0.207 Sum_probs=75.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccc---------------------ccc-CCCCCe
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEP---------------------ESQ-TGADRI 70 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~---------------------~~~-~~~~~i 70 (390)
.++.++|+|.|+ |-+|+++++.|.+. |+ ++++++++.-...++.+. ... ...-.+
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~a-Gvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRA-GIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 466789999996 55999999999999 76 788888864222111110 000 011235
Q ss_pred eEEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 71 ~~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
+.+..|++ .+.+.+++.++|+||.+... ...-..+-++|.+.+..+|+.+....+|..
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~D~-----------------~~~r~~in~~~~~~~ip~i~~~~~g~~G~~ 156 (338)
T PRK12475 99 VPVVTDVT-VEELEELVKEVDLIIDATDN-----------------FDTRLLINDLSQKYNIPWIYGGCVGSYGVT 156 (338)
T ss_pred EEEeccCC-HHHHHHHhcCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCCEEEEEecccEEEE
Confidence 56667775 45688888999999988631 111223447888888899999987777753
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00012 Score=65.61 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=61.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
..++|-||+||.|..++++|..+ |.+-.+..|+..++..+.... ++....+ ++.+++.+++.+.++++|+||+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~-g~~~aLAgRs~~kl~~l~~~L----G~~~~~~--p~~~p~~~~~~~~~~~VVlncv 79 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLARE-GLTAALAGRSSAKLDALRASL----GPEAAVF--PLGVPAALEAMASRTQVVLNCV 79 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHc-CCchhhccCCHHHHHHHHHhc----Ccccccc--CCCCHHHHHHHHhcceEEEecc
Confidence 46999999999999999999999 888888889888877655432 2233333 4445889999999999999999
Q ss_pred cccC
Q 016370 98 AICT 101 (390)
Q Consensus 98 ~~~~ 101 (390)
|...
T Consensus 80 GPyt 83 (382)
T COG3268 80 GPYT 83 (382)
T ss_pred cccc
Confidence 9764
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00081 Score=62.10 Aligned_cols=112 Identities=14% Similarity=0.111 Sum_probs=76.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccc-ccccc-CCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLL-EPESQ-TGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~-~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
.++||.|+|+ |.||++++..|... +. ++.++++..+...... +.... .....+.+..+ .+ +.++++|
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~-~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~------~~-~~~~~ad 75 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQ-GIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG------DY-SDCKDAD 75 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC------CH-HHhCCCC
Confidence 4579999998 99999999999988 64 7999998765432221 11000 00112222221 23 3468899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+||-+||.... ...+....+..|+.-.+.+++.+.+++ ..+|.+|
T Consensus 76 ivIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 76 LVVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred EEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99999997532 234566788899999999999888877 5666666
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00052 Score=63.93 Aligned_cols=110 Identities=20% Similarity=0.226 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccc------------------------ccccCCCC
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLE------------------------PESQTGAD 68 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~------------------------~~~~~~~~ 68 (390)
++...+|+|.|+ |.+|++++..|... |. ++.+++...-...++.+ ..++ .-
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~a-Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp--~v 96 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRA-GVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS--DV 96 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHc-CCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC--Cc
Confidence 456678999996 89999999999998 76 89999886422111111 0011 12
Q ss_pred CeeEEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 69 RIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 69 ~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
.++.+..+++. +.+.++++++|+||.+.. |...-..+.++|.+.++.+|+.|+...||.
T Consensus 97 ~v~~~~~~~~~-~~~~~~~~~~DlVid~~D-----------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G~ 155 (339)
T PRK07688 97 RVEAIVQDVTA-EELEELVTGVDLIIDATD-----------------NFETRFIVNDAAQKYGIPWIYGACVGSYGL 155 (339)
T ss_pred EEEEEeccCCH-HHHHHHHcCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence 35556666654 457778889999998853 122233466788888899999998887775
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00064 Score=62.68 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=75.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccC---CCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQT---GADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~---~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+||.|.|+ |.+|+.++..|+.. | ++|+++++.+.....+....... ......+.. .+ .. .+.++|+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~-g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~---~~-~l~~aDI 71 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQ-GIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD---YS-DCKDADI 71 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC---HH-HhCCCCE
Confidence 48999995 99999999999988 6 68999999876544332211000 011222222 12 22 3578999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||.+++.... ...+....+..|+.-.+.+.+..++++ ..+|.+|-
T Consensus 72 VIitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 72 VVITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred EEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 9999987532 334566788899999999999998887 55666663
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00054 Score=63.28 Aligned_cols=115 Identities=19% Similarity=0.120 Sum_probs=74.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-------eEEEEecCChh--hhcc-ccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-------KILALDVYNDK--IKHL-LEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~--~~~~-~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
++.||.|+|++|.||++++..|+.. +. ++++++..+.. .... .+.. +.......+..-.....+
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~-~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~-----~~~~~~~~~~~i~~~~~~ 75 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASG-ELFGKDQPVVLHLLDIPPAMKALEGVAMELE-----DCAFPLLAGVVATTDPEE 75 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhC-CcccCCCccEEEEEecCCcccccchHHHHHh-----hccccccCCcEEecChHH
Confidence 4569999999999999999999987 53 78999886421 1111 1110 000000001110123345
Q ss_pred hhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEee
Q 016370 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFS 138 (390)
Q Consensus 86 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~S 138 (390)
.++++|+||.+||... ....+..+.+..|+.-.+.+.+.+.+++ ..+|.+|
T Consensus 76 ~~~daDvVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 76 AFKDVDAALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred HhCCCCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 6788999999999753 2345667788999999999999888876 3444444
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00063 Score=59.60 Aligned_cols=74 Identities=19% Similarity=0.319 Sum_probs=62.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
|+++|.| .|-+|.++++.|.+. |++|+++++.+......... ......+.+|-+|++.|+++ +.++|+|+=+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~agi~~aD~vva~ 73 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEE-GHNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEAGIDDADAVVAA 73 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhC-CCceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence 6788888 899999999999999 99999999998876653321 13678899999999999998 6679999976
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
.+
T Consensus 74 t~ 75 (225)
T COG0569 74 TG 75 (225)
T ss_pred eC
Confidence 54
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00086 Score=62.03 Aligned_cols=114 Identities=18% Similarity=0.121 Sum_probs=75.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-------eEEEEecCChh--hhc-cccccccC--CCCCeeEEeCCCCChhHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-------KILALDVYNDK--IKH-LLEPESQT--GADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~--~~~-~~~~~~~~--~~~~i~~~~~D~~d~~~~ 83 (390)
+++||.|+|++|.||++++..|... +. ++.+++..+.. ... ..+..... ....+. ++ ...
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~-~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~--~~~ 74 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASG-DMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----IT--DDP 74 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhh-hhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Ee--cCh
Confidence 4679999999999999999999876 42 78889885432 111 11110000 001111 11 123
Q ss_pred HHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeec
Q 016370 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFST 139 (390)
Q Consensus 84 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss 139 (390)
.+.++++|+||-+||... ....+..+.+..|+.-.+.+.+...++. ..+|.+|-
T Consensus 75 y~~~~daDiVVitaG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 75 NVAFKDADVALLVGARPR--GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred HHHhCCCCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 456788999999999753 2345667788999999999998888843 56666663
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00094 Score=61.32 Aligned_cols=113 Identities=17% Similarity=0.159 Sum_probs=75.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||.|+|++|.||++++..|... + .++.++++.+ ......+... ......+.... +.+++.+.++++|+||-+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~-~~~~elvL~Di~~-a~g~a~DL~~--~~~~~~i~~~~--~~~~~~~~~~daDivvit 74 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQ-PYVSELSLYDIAG-AAGVAADLSH--IPTAASVKGFS--GEEGLENALKGADVVVIP 74 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCcEEEEecCCC-CcEEEchhhc--CCcCceEEEec--CCCchHHHcCCCCEEEEe
Confidence 6899999999999999999887 5 4789999876 2211111111 11111111100 112356778999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||.... ...+....+..|..-.+.+.+...+++ ..+|.+|-
T Consensus 75 aG~~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 75 AGVPRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred CCCCCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 997532 334566788899999999998888887 45555553
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00032 Score=65.08 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=59.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+|++|+|+||||++|..|++.|.++ +..++..+....+.-+.+. ..+ ...++.+.+.. + +.++|+|
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~-------~~~---~~l~~~~~~~~-~-~~~vD~v 70 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP-------FAG---KNLRVREVDSF-D-FSQVQLA 70 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec-------cCC---cceEEeeCChH-H-hcCCCEE
Confidence 4579999999999999999999975 2334445544332211111 011 12333333322 2 4679999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
|-++... ....++..+.+.|.++|=.|+..-+
T Consensus 71 Fla~p~~------------------~s~~~v~~~~~~G~~VIDlS~~fR~ 102 (336)
T PRK05671 71 FFAAGAA------------------VSRSFAEKARAAGCSVIDLSGALPS 102 (336)
T ss_pred EEcCCHH------------------HHHHHHHHHHHCCCeEEECchhhcC
Confidence 9876411 1334677777778778888886543
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00028 Score=69.01 Aligned_cols=73 Identities=22% Similarity=0.302 Sum_probs=61.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
|+|+|+|+ |.+|+++++.|.+. |++|+++++++.....+.. ..+++++.+|.++.+.+.++ ++++|+||-+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~-g~~v~vid~~~~~~~~~~~------~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE-NNDVTVIDTDEERLRRLQD------RLDVRTVVGNGSSPDVLREAGAEDADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHh------hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence 68999997 99999999999998 9999999998876554432 13688999999999999988 7889999877
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
..
T Consensus 73 ~~ 74 (453)
T PRK09496 73 TD 74 (453)
T ss_pred cC
Confidence 53
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00048 Score=67.30 Aligned_cols=76 Identities=20% Similarity=0.229 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+++|+|+|+|+++ +|..+++.|+++ |++|+++++... ......... ...+++++.+|..+ ....++|+|
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l---~~~~~~~~~~~~~~-----~~~~~~d~v 72 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKL-GAKVILTDEKEEDQLKEALEEL---GELGIELVLGEYPE-----EFLEGVDLV 72 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHH---HhcCCEEEeCCcch-----hHhhcCCEE
Confidence 4678999999988 999999999999 999999998752 221111100 01367788888876 234569999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|+.++..
T Consensus 73 v~~~g~~ 79 (450)
T PRK14106 73 VVSPGVP 79 (450)
T ss_pred EECCCCC
Confidence 9998753
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00043 Score=55.51 Aligned_cols=77 Identities=22% Similarity=0.213 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+++++|+|.|+ |-+|+.++..|.+. |.+ |+++.|+.++...+.... ....++++. .+++.+.+.++|+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~---~~~~~~~~~-----~~~~~~~~~~~Di 78 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEF---GGVNIEAIP-----LEDLEEALQEADI 78 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHH---TGCSEEEEE-----GGGHCHHHHTESE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHc---Cccccceee-----HHHHHHHHhhCCe
Confidence 567899999997 77999999999999 766 999999887666554321 012333433 3445577788999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||++.+..
T Consensus 79 vI~aT~~~ 86 (135)
T PF01488_consen 79 VINATPSG 86 (135)
T ss_dssp EEE-SSTT
T ss_pred EEEecCCC
Confidence 99998654
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.001 Score=61.40 Aligned_cols=114 Identities=15% Similarity=0.119 Sum_probs=71.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc-cccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL-EPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
||||.|+|| |.+|..++..|... |. +|+++++.++..+... +.......... ..-+....++ +.++++|+||
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~-~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~---~~~i~~~~d~-~~~~~aDiVi 75 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALK-ELGDVVLFDIVEGVPQGKALDIAEAAPVEGF---DTKITGTNDY-EDIAGSDVVV 75 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCeEEEEEECCCchhHHHHHHHHhhhhhcCC---CcEEEeCCCH-HHHCCCCEEE
Confidence 589999998 99999999999987 54 9999999765432211 10000000000 0111111223 3468899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
.+++... ....+..+.+..|+.-.+.+++...+.. ..+|.+|
T Consensus 76 i~~~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 76 ITAGVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred ECCCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9988653 2233445666788888888888887776 4466665
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0023 Score=59.71 Aligned_cols=96 Identities=8% Similarity=0.068 Sum_probs=57.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC---eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH---KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.++|.|.||||++|..|++.|.++ +| ++..+....+.-+.... .+..+...++. . ..+.++|+|
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~-~hP~~~l~~las~rsaGk~~~~-------~~~~~~v~~~~-~----~~~~~~D~v 73 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDR-DFPYSSLKMLASARSAGKKVTF-------EGRDYTVEELT-E----DSFDGVDIA 73 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhC-CCCcceEEEEEccCCCCCeeee-------cCceeEEEeCC-H----HHHcCCCEE
Confidence 468999999999999999999985 55 45444333222111111 11222222332 1 234679999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
|.+++.. .+..++..+.+.|.++|=.|+..=+
T Consensus 74 f~a~p~~------------------~s~~~~~~~~~~g~~VIDlS~~fR~ 105 (344)
T PLN02383 74 LFSAGGS------------------ISKKFGPIAVDKGAVVVDNSSAFRM 105 (344)
T ss_pred EECCCcH------------------HHHHHHHHHHhCCCEEEECCchhhc
Confidence 9877522 1444555555567778888876533
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0015 Score=60.56 Aligned_cols=117 Identities=22% Similarity=0.171 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-ccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
++.+||.|+|| |.+|+.++..|... | .++++++.+++..... .+........+.. ..+....+++ .++++|+
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~-~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~---~~i~~~~d~~-~l~~ADi 76 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQK-NLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN---INILGTNNYE-DIKDSDV 76 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHC-CCCeEEEEECCCccchhHHHHHhhhccccCCC---eEEEeCCCHH-HhCCCCE
Confidence 46679999997 99999999988887 6 6899999876432211 0000000000100 1111112355 6688999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||-+++.... ........+..|..-.+.+++.+.+.. ..+|.+|-
T Consensus 77 VVitag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 77 VVITAGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred EEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9999986532 223445677788888888888888887 44666654
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00077 Score=62.87 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=57.3
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeE---EEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKI---LALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+|.||||++|+.|++.|.++ +|.+ ..+.+..+..+.+.. .+.+....|+. ...+.++|+||-
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~-~hp~~~l~~~as~~~~g~~~~~-------~~~~~~~~~~~-----~~~~~~~D~v~~ 67 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEER-NFPIDKLVLLASDRSAGRKVTF-------KGKELEVNEAK-----IESFEGIDIALF 67 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhC-CCChhhEEEEeccccCCCeeee-------CCeeEEEEeCC-----hHHhcCCCEEEE
Confidence 5899999999999999999886 6664 344454433332221 23455555664 123468999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+++.. .+..++..+.+.|.++|=.|+..
T Consensus 68 a~g~~------------------~s~~~a~~~~~~G~~VID~ss~~ 95 (339)
T TIGR01296 68 SAGGS------------------VSKEFAPKAAKCGAIVIDNTSAF 95 (339)
T ss_pred CCCHH------------------HHHHHHHHHHHCCCEEEECCHHH
Confidence 88632 13444555555666666666643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0073 Score=48.36 Aligned_cols=109 Identities=19% Similarity=0.229 Sum_probs=71.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccc-------------------c-cCCCCCeeEEeC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPE-------------------S-QTGADRIQFHRL 75 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~-------------------~-~~~~~~i~~~~~ 75 (390)
.++|+|.| .|-+|+.+++.|... |. ++.++|...-....+.+.. . ....-.++.+..
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~-Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~ 79 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARS-GVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE 79 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHH-TTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHh-CCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence 36899999 788999999999999 75 6888887532221111100 0 001234556666
Q ss_pred CCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 76 D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
++ +.+.+.++++++|+||.+... ......+.++|++.++.+|+.++...+|.
T Consensus 80 ~~-~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G~ 131 (135)
T PF00899_consen 80 KI-DEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGIPFIDAGVNGFYGQ 131 (135)
T ss_dssp HC-SHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT-EEEEEEEETTEEE
T ss_pred cc-ccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence 66 456678888899999998642 22234566789999989999998766553
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0021 Score=58.46 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=72.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEe--CCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHR--LNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~--~D~~d~~~~~~~~~~~d~Vi 94 (390)
|||.|+|+ |.||+.++..|+.+. +.++++++......+...... .....+.. ..+....+ .+.++++|+|+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL----~~~~~~~~~~~~i~~~~~-y~~~~~aDiVv 74 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDL----SHAAAPLGSDVKITGDGD-YEDLKGADIVV 74 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcch----hhcchhccCceEEecCCC-hhhhcCCCEEE
Confidence 58999999 999999999998762 238999998843332211000 01111111 11111111 44567899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
-+||... .......+.+..|..-.+.+.+...+.+ ..++.+|
T Consensus 75 itAG~pr--KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 75 ITAGVPR--KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred EeCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 9998764 3334566788899999999999888888 3444444
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00075 Score=62.32 Aligned_cols=38 Identities=18% Similarity=0.247 Sum_probs=33.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK 56 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 56 (390)
+|+|.|+| .|.+|..++..|.+. |++|+++++++....
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~-G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARA-GHEVRLWDADPAAAA 39 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHC-CCeeEEEeCCHHHHH
Confidence 36899999 999999999999999 999999999876444
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0024 Score=62.46 Aligned_cols=76 Identities=20% Similarity=0.168 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~V 93 (390)
..+++|+|+|+ |.+|+.+++.|.+. |++|+++++++.....+... ..++.++.||.++++.++++ +.++|+|
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~-~~~v~vid~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~L~~~~~~~a~~v 301 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKE-GYSVKLIERDPERAEELAEE-----LPNTLVLHGDGTDQELLEEEGIDEADAF 301 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHH-----CCCCeEEECCCCCHHHHHhcCCccCCEE
Confidence 35689999997 99999999999998 99999999988765554331 23678999999999988654 4569999
Q ss_pred EEec
Q 016370 94 INLA 97 (390)
Q Consensus 94 ih~a 97 (390)
|-+.
T Consensus 302 i~~~ 305 (453)
T PRK09496 302 IALT 305 (453)
T ss_pred EECC
Confidence 8544
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0011 Score=58.23 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=52.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI----- 87 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~----- 87 (390)
+++++-+++=-.++|.||.++++.|.++ |++|+++++... +.. .....+|+.+.+.+.+++
T Consensus 11 e~iD~VR~itN~SSGgIG~AIA~~la~~-Ga~Vvlv~~~~~----l~~---------~~~~~~Dv~d~~s~~~l~~~v~~ 76 (227)
T TIGR02114 11 EPIDSVRSITNHSTGHLGKIITETFLSA-GHEVTLVTTKRA----LKP---------EPHPNLSIREIETTKDLLITLKE 76 (227)
T ss_pred CCCCCceeecCCcccHHHHHHHHHHHHC-CCEEEEEcChhh----ccc---------ccCCcceeecHHHHHHHHHHHHH
Confidence 4455656655567999999999999999 999999876321 100 001346777766665443
Q ss_pred --ccccEEEEeccccC
Q 016370 88 --KMADLTINLAAICT 101 (390)
Q Consensus 88 --~~~d~Vih~a~~~~ 101 (390)
..+|++||+||...
T Consensus 77 ~~g~iDiLVnnAgv~d 92 (227)
T TIGR02114 77 LVQEHDILIHSMAVSD 92 (227)
T ss_pred HcCCCCEEEECCEecc
Confidence 34899999999764
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0035 Score=53.97 Aligned_cols=114 Identities=17% Similarity=0.177 Sum_probs=73.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccc------------------ccCCCC--Cee
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPE------------------SQTGAD--RIQ 71 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~------------------~~~~~~--~i~ 71 (390)
.+++..+|+|.| .|-+|+.+++.|... |. ++++++...-...++.+.. ....-+ .++
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~~-Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~ 94 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAGA-GVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVT 94 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHHc-CCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence 346677999999 788999999999999 75 7999988632111111100 000112 233
Q ss_pred EEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 72 ~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
.+...+. .+.+.+++.++|+||.+... ...-..+-++|++.++.+|+.++...+|..
T Consensus 95 ~~~~~i~-~~~~~~~~~~~D~Vi~~~d~-----------------~~~r~~l~~~~~~~~ip~i~~~~~g~~G~~ 151 (202)
T TIGR02356 95 ALKERVT-AENLELLINNVDLVLDCTDN-----------------FATRYLINDACVALGTPLISAAVVGFGGQL 151 (202)
T ss_pred EehhcCC-HHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEeccCeEEE
Confidence 3333443 35677888899999987631 111233557888888899999987666653
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0036 Score=48.55 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=55.8
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-ccccEEEEecc
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI-KMADLTINLAA 98 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~-~~~d~Vih~a~ 98 (390)
|+|.|. |-+|..+++.|.+. +.+|+++++++.....+.. .++.++.||.++++.++++- .+++.||-+..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~-~~~vvvid~d~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEG-GIDVVVIDRDPERVEELRE-------EGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHH-------TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhC-CCEEEEEECCcHHHHHHHh-------cccccccccchhhhHHhhcCccccCEEEEccC
Confidence 678885 78999999999996 7899999999877665554 46899999999999888764 35898887653
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0048 Score=52.93 Aligned_cols=112 Identities=17% Similarity=0.274 Sum_probs=72.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccc------------------------ccccCCCC
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLE------------------------PESQTGAD 68 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~------------------------~~~~~~~~ 68 (390)
.++..+|+|.|++| +|+.+++.|... | .++++++...-....+.+ ..++ .-
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~-GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp--~v 91 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLA-GIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP--NV 91 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHc-CCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC--CC
Confidence 34567899999888 999999999998 6 558888875322111111 0011 12
Q ss_pred CeeEEeCCCCC-hhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 69 RIQFHRLNIKH-DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 69 ~i~~~~~D~~d-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
.++.+..++.+ .+...+.+.++|+||.+... ......+-++|++.+..+|+.++.+.||..
T Consensus 92 ~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~-----------------~~~~~~ln~~c~~~~ip~i~~~~~G~~G~v 153 (198)
T cd01485 92 KLSIVEEDSLSNDSNIEEYLQKFTLVIATEEN-----------------YERTAKVNDVCRKHHIPFISCATYGLIGYA 153 (198)
T ss_pred EEEEEecccccchhhHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEeecCEEEE
Confidence 34445555542 44566777889999966421 112234557889998999999998877764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0017 Score=59.22 Aligned_cols=103 Identities=11% Similarity=0.110 Sum_probs=60.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+||.|.||+||.|..|++.|...+..++..++.+...-+.+..... ...+..-.....-|.+.+ ...++|+||-
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p--~l~g~~~l~~~~~~~~~~--~~~~~DvvFl 76 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHP--NLRGLVDLPFQTIDPEKI--ELDECDVVFL 76 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCc--ccccccccccccCChhhh--hcccCCEEEE
Confidence 367999999999999999999999988997777665532222211100 001100011111122222 3456999998
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
+.-.. ....++......+.++|=+|+.
T Consensus 77 alPhg------------------~s~~~v~~l~~~g~~VIDLSad 103 (349)
T COG0002 77 ALPHG------------------VSAELVPELLEAGCKVIDLSAD 103 (349)
T ss_pred ecCch------------------hHHHHHHHHHhCCCeEEECCcc
Confidence 75211 1334555555556668888875
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0014 Score=59.08 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=74.4
Q ss_pred EEEEcCchhHHHHHHHHHHhhCC----CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 20 ICMIGAGGFIGSHLCEKILLETP----HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|.|+||+|.+|..++..|+.. | .+|.++++.+............ ..... ....+.-.+++.+.++++|+||-
T Consensus 1 I~IIGagG~vG~~ia~~l~~~-~~~~~~el~L~D~~~~~l~~~~~dl~~-~~~~~--~~~~i~~~~d~~~~~~~aDiVv~ 76 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADG-SVLLAIELVLYDIDEEKLKGVAMDLQD-AVEPL--ADIKVSITDDPYEAFKDADVVII 76 (263)
T ss_pred CEEECCCChHHHHHHHHHHhC-CCCcceEEEEEeCCcccchHHHHHHHH-hhhhc--cCcEEEECCchHHHhCCCCEEEE
Confidence 579999999999999999987 6 7899999876443322111000 00000 01122222345677889999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+++..... ..........|+.-.+.+++..++.. ..+|.+|
T Consensus 77 t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 77 TAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99876432 23445677789999999999998887 4555554
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0022 Score=59.94 Aligned_cols=96 Identities=11% Similarity=0.010 Sum_probs=57.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCe---EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHK---ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|++|.|.||||++|+.|++.|++++.+. ++.+....+.... .. ..+-.....++.+.+. +.++|+|
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~-~~------f~g~~~~v~~~~~~~~----~~~~Div 69 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAA-PS------FGGKEGTLQDAFDIDA----LKKLDII 69 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcc-cc------cCCCcceEEecCChhH----hcCCCEE
Confidence 4789999999999999999888776777 5665443221111 11 0111222233333332 3579999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCc--EEEeeccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR--LIHFSTCE 141 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~v~~Ss~~ 141 (390)
|.+++.. .+..+...+.+.|.+ +|=.||..
T Consensus 70 f~a~~~~------------------~s~~~~~~~~~aG~~~~VID~Ss~f 101 (369)
T PRK06598 70 ITCQGGD------------------YTNEVYPKLRAAGWQGYWIDAASTL 101 (369)
T ss_pred EECCCHH------------------HHHHHHHHHHhCCCCeEEEECChHH
Confidence 9887521 145566666667743 55555543
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0032 Score=58.94 Aligned_cols=34 Identities=12% Similarity=0.333 Sum_probs=28.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~ 51 (390)
|+|+|+|++|++|++|++.|...+.+++..+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 5899999999999999999988756788877443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0035 Score=49.53 Aligned_cols=91 Identities=13% Similarity=0.131 Sum_probs=67.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
++++|++.| .| .|.+++..|.+. |++|++++.++...+.... ..++++.+|+.+++ -++.+++|.|+-
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~-------~~~~~v~dDlf~p~--~~~y~~a~liys 83 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKK-------LGLNAFVDDLFNPN--LEIYKNAKLIYS 83 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-------hCCeEEECcCCCCC--HHHHhcCCEEEE
Confidence 457899999 55 899999999988 9999999999886665543 37899999999876 233456888885
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEE
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v 135 (390)
+= + -......+++.|++.+ .-+|
T Consensus 84 ir----p-------------p~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 84 IR----P-------------PRDLQPFILELAKKINVPLII 107 (134)
T ss_pred eC----C-------------CHHHHHHHHHHHHHcCCCEEE
Confidence 42 1 1222567889999999 4333
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0053 Score=52.61 Aligned_cols=110 Identities=13% Similarity=0.236 Sum_probs=69.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccc----------------------ccccCCCCCe
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLE----------------------PESQTGADRI 70 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~----------------------~~~~~~~~~i 70 (390)
.++..+|+|.|++| +|.++++.|... |. +++++|...-....+.+ ..++ .-.+
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~-GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp--~v~i 93 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLS-GIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP--RVKV 93 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHc-CCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC--CCEE
Confidence 34567899999877 999999999998 65 58888765322111111 1111 1234
Q ss_pred eEEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 71 ~~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
+.+...+. +...+.+.++|+||.+... ...-..+-++|++.+..+|+.++...||.-
T Consensus 94 ~~~~~~~~--~~~~~~~~~~dvVi~~~~~-----------------~~~~~~ln~~c~~~~ip~i~~~~~G~~G~v 150 (197)
T cd01492 94 SVDTDDIS--EKPEEFFSQFDVVVATELS-----------------RAELVKINELCRKLGVKFYATGVHGLFGFV 150 (197)
T ss_pred EEEecCcc--ccHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEecCCEEEE
Confidence 44444444 2345667889999976421 111233457888898889999997777654
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0028 Score=53.68 Aligned_cols=81 Identities=20% Similarity=0.293 Sum_probs=45.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE-----E-eCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF-----H-RLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~-----~-~~D~~d~~~~~~~~~~~d 91 (390)
|||.|.| .||+|-.++..|.+. ||+|++++.++.....+.+...+-..++++- . .+.+.-..++..++..+|
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~-G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad 78 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEK-GHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDAD 78 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHT-TSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred CEEEEEC-CCcchHHHHHHHHhC-CCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccc
Confidence 7899996 999999999999999 9999999999876665544321111111100 0 112222234556666789
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
++|-|....
T Consensus 79 v~~I~VpTP 87 (185)
T PF03721_consen 79 VVFICVPTP 87 (185)
T ss_dssp EEEE----E
T ss_pred eEEEecCCC
Confidence 999887643
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0024 Score=59.23 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=58.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCe---EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHK---ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.++|.|.||||++|+.|++.|.+.+.++ +..+....+.-+.+.- ....+.+. ++ +++. +.++|+|
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~-----~~~~l~v~--~~-~~~~----~~~~Div 72 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQF-----KGREIIIQ--EA-KINS----FEGVDIA 72 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeee-----CCcceEEE--eC-CHHH----hcCCCEE
Confidence 4689999999999999999999755777 5555443322221100 01112222 22 2222 3579999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
|.+++.. .+..+...+.+.|..+|=.|+..-+
T Consensus 73 f~a~~~~------------------~s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 73 FFSAGGE------------------VSRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred EECCChH------------------HHHHHHHHHHHCCCEEEECchhhcC
Confidence 9887421 1445666666677777877776544
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.051 Score=43.93 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=31.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
.+|+|.||-|-+|+++++.+.++ +|-|..++..+.
T Consensus 4 grVivYGGkGALGSacv~~Fkan-nywV~siDl~eN 38 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKAN-NYWVLSIDLSEN 38 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhc-CeEEEEEeeccc
Confidence 58999999999999999999998 999999887653
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.007 Score=53.22 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=72.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccc------------------cCCC--CCeeE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPES------------------QTGA--DRIQF 72 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~------------------~~~~--~~i~~ 72 (390)
++...+|+|.| .|-+|+++++.|... |. +++++|...-....+.+... ...- -.++.
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~ 95 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAA-GVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA 95 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 45667999999 788999999999998 64 67777765322222111000 0001 23455
Q ss_pred EeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
+...+ +.+.+.+++.++|+||.+.... ..-..+-++|++.+..+|+.+....+|.-
T Consensus 96 ~~~~i-~~~~~~~~~~~~DvVi~~~d~~-----------------~~r~~l~~~~~~~~ip~i~~g~~g~~g~v 151 (228)
T cd00757 96 YNERL-DAENAEELIAGYDLVLDCTDNF-----------------ATRYLINDACVKLGKPLVSGAVLGFEGQV 151 (228)
T ss_pred eccee-CHHHHHHHHhCCCEEEEcCCCH-----------------HHHHHHHHHHHHcCCCEEEEEeccCEEEE
Confidence 55555 3456778888999999886421 11234567888888999999887666553
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0032 Score=58.78 Aligned_cols=111 Identities=16% Similarity=0.210 Sum_probs=73.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccc-ccccc-CCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLL-EPESQ-TGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~-~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+||.|+|+ |.||++++..|+.. + .++.+++..+....... +.... .......+.. ..+++ .++++|+|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~-~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-----~~dy~-~~~daDiV 109 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQ-DLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-----STDYA-VTAGSDLC 109 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-----CCCHH-HhCCCCEE
Confidence 69999996 99999999999987 4 46999998764332211 11000 0011222221 11133 37889999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|-+||.... ...+..+.+..|+.-.+.+.+..++++ ..+|.+|
T Consensus 110 VitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 110 IVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred EECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999997532 234566788899999999999888887 5566666
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0035 Score=57.64 Aligned_cols=114 Identities=16% Similarity=0.140 Sum_probs=71.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcc-ccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHL-LEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|||.|.|+ |++|..++..|... |+ +|++++..+...... .+.... .-.......+.-..++++ ++++|+||-
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~-g~~~VvlvDi~~~l~~g~a~d~~~~---~~~~~~~~~i~~t~d~~~-~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEK-ELADLVLLDVVEGIPQGKALDMYEA---SPVGGFDTKVTGTNNYAD-TANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHc-CCCeEEEEeCCCChhHHHHHhhhhh---hhccCCCcEEEecCCHHH-hCCCCEEEE
Confidence 58999996 99999999999987 65 899999865432211 110000 000000111211122443 578999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+++... .......+.+..|......+++...+++ ..+|.+|-
T Consensus 76 tag~p~--~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 76 TAGLPR--KPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred cCCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 998653 2233455677789999999998887776 55666664
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0021 Score=59.52 Aligned_cols=99 Identities=15% Similarity=0.064 Sum_probs=60.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHh--hCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILL--ETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.++|.|.||||++|..|++.|.+ .|..++..+....+.-+.+.-. ...+.+- ++. . ..+.++|+|
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~-----~~~~~v~--~~~---~--~~~~~~Dvv 70 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFG-----GKSVTVQ--DAA---E--FDWSQAQLA 70 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEEC-----CcceEEE--eCc---h--hhccCCCEE
Confidence 457999999999999999999998 4567777775543322221100 0111111 221 1 123578999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 144 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~ 144 (390)
|.++... .+..++..+.+.|.++|=.|+..=+.
T Consensus 71 f~a~p~~------------------~s~~~~~~~~~~g~~VIDlS~~fRl~ 103 (336)
T PRK08040 71 FFVAGRE------------------ASAAYAEEATNAGCLVIDSSGLFALE 103 (336)
T ss_pred EECCCHH------------------HHHHHHHHHHHCCCEEEECChHhcCC
Confidence 9887421 14456666666677788888765433
|
|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.016 Score=56.28 Aligned_cols=89 Identities=18% Similarity=0.266 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcCc---hhHHHHHHHHHHhhCCC--eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 14 PIKPVTICMIGAG---GFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 14 ~~~~~~vlItGat---G~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.+++++|.|.|+| |-+|..+++.|++. || +|+.+..+.... .++. -...+.++-.
T Consensus 4 l~~p~siavvGaS~~~~~~g~~~~~~l~~~-gf~g~v~~Vnp~~~~i------------~G~~-------~~~sl~~lp~ 63 (447)
T TIGR02717 4 LFNPKSVAVIGASRDPGKVGYAIMKNLIEG-GYKGKIYPVNPKAGEI------------LGVK-------AYPSVLEIPD 63 (447)
T ss_pred ccCCCEEEEEccCCCCCchHHHHHHHHHhC-CCCCcEEEECCCCCcc------------CCcc-------ccCCHHHCCC
Confidence 4678999999998 77999999999987 87 587776543211 1222 2234555555
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC 140 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~ 140 (390)
.+|.++-+.. -..+..+++.|.+.| +.+|.+|+.
T Consensus 64 ~~Dlavi~vp------------------~~~~~~~l~e~~~~gv~~~vi~s~g 98 (447)
T TIGR02717 64 PVDLAVIVVP------------------AKYVPQVVEECGEKGVKGAVVITAG 98 (447)
T ss_pred CCCEEEEecC------------------HHHHHHHHHHHHhcCCCEEEEECCC
Confidence 6888886542 122566778888888 778777763
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.007 Score=53.12 Aligned_cols=99 Identities=17% Similarity=0.209 Sum_probs=60.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEE-EecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILA-LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
||||.|.|++|-+|+.+++.+.+.++.++.+ ++|.++..... +... ..++.....-+.+ ++......+|++|.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~-d~ge---~~g~~~~gv~v~~--~~~~~~~~~DV~ID 75 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGS-DAGE---LAGLGLLGVPVTD--DLLLVKADADVLID 75 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCcccccc-chhh---hccccccCceeec--chhhcccCCCEEEE
Confidence 6899999999999999999999987788554 56654422110 0000 0011111111111 24445556999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
+... .++...++.|.++++++|.-.|
T Consensus 76 FT~P------------------~~~~~~l~~~~~~~~~lVIGTT 101 (266)
T COG0289 76 FTTP------------------EATLENLEFALEHGKPLVIGTT 101 (266)
T ss_pred CCCc------------------hhhHHHHHHHHHcCCCeEEECC
Confidence 8742 2366778888888866654444
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.003 Score=52.45 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=48.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|+++++|..+++.|.++ |.+|+++.|+. +++.+.+.++|+|
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~-g~~V~v~~r~~----------------------------~~l~~~l~~aDiV 91 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNR-NATVTVCHSKT----------------------------KNLKEHTKQADIV 91 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhC-CCEEEEEECCc----------------------------hhHHHHHhhCCEE
Confidence 468899999999888999999999998 88998888742 3567788889999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|.+.+.
T Consensus 92 Isat~~ 97 (168)
T cd01080 92 IVAVGK 97 (168)
T ss_pred EEcCCC
Confidence 988764
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0078 Score=52.93 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChh-h-hccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDK-I-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~-~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
..++-||.|.||.|-||+.|...|...+... ..+.+-...+ . ..+... .-......+.-++.++++++++
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI-------~T~s~V~g~~g~~~L~~al~~a 97 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI-------NTNSSVVGFTGADGLENALKGA 97 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc-------CCCCceeccCChhHHHHHhcCC
Confidence 3466799999999999999998888764433 3333332211 0 000000 0111223444567899999999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|+|+--||...- ........+.+|..-.+.|..++.+.- .++.++|
T Consensus 98 dvVvIPAGVPRK--PGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs 145 (345)
T KOG1494|consen 98 DVVVIPAGVPRK--PGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS 145 (345)
T ss_pred CEEEecCCCCCC--CCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence 999999998643 233445778899999999998887776 5555565
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0045 Score=48.61 Aligned_cols=30 Identities=23% Similarity=0.567 Sum_probs=27.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILAL 48 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~ 48 (390)
||.|+|++|.+|..+++.|.+.+++++.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEE
Confidence 588999999999999999999668998887
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0035 Score=57.74 Aligned_cols=113 Identities=15% Similarity=0.127 Sum_probs=73.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-ccccccC-CCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPESQT-GADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+||.|+|+ |.||+.++..|...+- .++++++..++..... .+..... ......+... .+++. ++++|+||
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~~-~~~adivv 76 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD-----KDYSV-TANSKVVI 76 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC-----CCHHH-hCCCCEEE
Confidence 58999996 9999999999988722 4699999876433211 1110000 0011122221 12333 68899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
-+||.... ...+....+..|+.-.+.+.+..++++ ..+|.+|-
T Consensus 77 itaG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 77 VTAGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred ECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 99997542 234566788899999999999998888 55666663
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.015 Score=53.54 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=71.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|||.|.|+ |.+|..++..|..+ | .+|.++++++..... +.... .......+..+ + + +.++++|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~-g~~~ev~l~D~~~~~~~g~a~dl~~~~--~~~~~~~i~~~---d---~-~~l~~aD 69 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLR-GLASEIVLVDINKAKAEGEAMDLAHGT--PFVKPVRIYAG---D---Y-ADCKGAD 69 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHc-CCCCEEEEEECCchhhhhHHHHHHccc--cccCCeEEeeC---C---H-HHhCCCC
Confidence 58999997 99999999999998 7 689999998754332 11110 00011222211 2 2 3478899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+||-+++... ....+.......|+...+.+++..++.+ ..++.++
T Consensus 70 iViita~~~~--~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 70 VVVITAGANQ--KPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred EEEEccCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999998753 2233455677789999999998888877 3444443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.01 Score=54.59 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=72.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhcc-cccccc-CCC--CCeeEEeCCCCChhHHHHhhccccE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHL-LEPESQ-TGA--DRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~-~~~~~~-~~~--~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
||.|.|+ |.||+.++..|+.+ + -++++++..++..... .++... ... ..+.+..+| .+.++++|+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~-~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDi 71 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALAL-GLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADI 71 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCE
Confidence 5889998 99999999999987 5 3699999865432211 111110 000 133444333 345678999
Q ss_pred EEEeccccCCccccCC--hhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 93 TINLAAICTPADYNTR--PLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~--~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
||-+||.... ...+ ..+.+..|+.-.+.+.+...+++ ..+|.+|
T Consensus 72 vvitaG~~~k--pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 72 IVITAGPSID--PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred EEECCCCCCC--CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 9999997532 1222 36778899999999999999888 4444444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0049 Score=55.37 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=71.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+++|.|+|+.| +|+--++...+- |++|+++++.+.+.+...+. -+.+.+..-..|++.++++.+..|.++|
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~------LGAd~fv~~~~d~d~~~~~~~~~dg~~~ 252 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKS------LGADVFVDSTEDPDIMKAIMKTTDGGID 252 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHh-CcEEEEEeCCchhHHHHHHh------cCcceeEEecCCHHHHHHHHHhhcCcce
Confidence 578999999999 998888888887 99999999998544443331 2556665555588888888887888888
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
++...+. . ....++.+++..| ++|+++-
T Consensus 253 ~v~~~a~-----~----------~~~~~~~~lk~~G-t~V~vg~ 280 (360)
T KOG0023|consen 253 TVSNLAE-----H----------ALEPLLGLLKVNG-TLVLVGL 280 (360)
T ss_pred eeeeccc-----c----------chHHHHHHhhcCC-EEEEEeC
Confidence 7753310 1 1234556666665 7888885
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0036 Score=57.26 Aligned_cols=83 Identities=19% Similarity=0.205 Sum_probs=56.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
+++|.|.||||++|..|++.|.+.+..++..+..+... ++.+ ....+.++|+||-+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------------~~~~---~~~~~~~~DvvFla 57 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------------DAAA---RRELLNAADVAILC 57 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------------cccC---chhhhcCCCEEEEC
Confidence 46899999999999999999999876777776544321 1111 22345679999987
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
.... ....++..+.+.|.++|=.|+..
T Consensus 58 lp~~------------------~s~~~~~~~~~~g~~VIDlSadf 84 (313)
T PRK11863 58 LPDD------------------AAREAVALIDNPATRVIDASTAH 84 (313)
T ss_pred CCHH------------------HHHHHHHHHHhCCCEEEECChhh
Confidence 6311 13445555556677888888754
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0083 Score=57.76 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL 59 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~ 59 (390)
|++|+|.|.| .|++|..++..|.+. |++|+++++++.....+.
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~-G~~V~~~D~~~~~v~~l~ 43 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASR-QKQVIGVDINQHAVDTIN 43 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhC-CCEEEEEeCCHHHHHHHH
Confidence 4568999998 799999999999999 999999999887766543
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=52.83 Aligned_cols=76 Identities=24% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+++++|+|+|+ |.+|..+++.|.+.++++|++++|+......+.+.. +...+..+..+ ..++++++|+||
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF------GELGIAIAYLD---LEELLAEADLII 86 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH------hhcccceeecc---hhhccccCCEEE
Confidence 46789999997 899999999999873378999999876554433211 11111122333 334467899999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
.+....
T Consensus 87 ~~~~~~ 92 (155)
T cd01065 87 NTTPVG 92 (155)
T ss_pred eCcCCC
Confidence 998654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.015 Score=51.76 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccc----------------------ccccCCCCCe
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLE----------------------PESQTGADRI 70 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~----------------------~~~~~~~~~i 70 (390)
.++..+|+|.|+ |-+|+.+++.|... | .++++++...-....+.+ ..++ .-.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp--~v~i 104 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAA-GVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP--HIAI 104 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC--CCEE
Confidence 456789999997 99999999999998 6 468888765322211111 0011 1234
Q ss_pred eEEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 71 ~~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
+.+...+. .+.+.+++.++|+||.+... ...-..+-++|++.++.+|+.++...+|.
T Consensus 105 ~~~~~~i~-~~~~~~~~~~~DiVi~~~D~-----------------~~~r~~ln~~~~~~~ip~v~~~~~g~~G~ 161 (245)
T PRK05690 105 ETINARLD-DDELAALIAGHDLVLDCTDN-----------------VATRNQLNRACFAAKKPLVSGAAIRMEGQ 161 (245)
T ss_pred EEEeccCC-HHHHHHHHhcCCEEEecCCC-----------------HHHHHHHHHHHHHhCCEEEEeeeccCCce
Confidence 55555554 44577788899999988631 11123455788888888998776555544
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.02 Score=46.34 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=66.8
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccc------------------ccCC--CCCeeEEeCCC
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPE------------------SQTG--ADRIQFHRLNI 77 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~------------------~~~~--~~~i~~~~~D~ 77 (390)
+|+|.|+ |-+|+.+++.|... |+ ++++++...-....+.+.. .... .-.++.+..++
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~-Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~ 78 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARS-GVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGI 78 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHC-CCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeec
Confidence 5899995 99999999999998 75 6888876532111111000 0000 12334444444
Q ss_pred CChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccc
Q 016370 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 144 (390)
Q Consensus 78 ~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~ 144 (390)
.+.. ..+.+.++|+||.+... ......+.++|++.+..+|.+++...+|
T Consensus 79 ~~~~-~~~~~~~~diVi~~~d~-----------------~~~~~~l~~~~~~~~i~~i~~~~~g~~g 127 (143)
T cd01483 79 SEDN-LDDFLDGVDLVIDAIDN-----------------IAVRRALNRACKELGIPVIDAGGLGLGG 127 (143)
T ss_pred Chhh-HHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEcCCCcEE
Confidence 4433 46777889999988642 2224456788999988899988865443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.003 Score=52.42 Aligned_cols=65 Identities=20% Similarity=0.218 Sum_probs=49.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|.+.| .|-+|+.+++.|++. |++|++.+|+++..+.+... +++. .+...++++++|+||-+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~-------g~~~-------~~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEA-------GAEV-------ADSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHT-------TEEE-------ESSHHHHHHHBSEEEE-
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHh-------hhhh-------hhhhhhHhhcccceEee
Confidence 68999999 699999999999998 99999999998777665542 3222 24567777888999977
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 65 v 65 (163)
T PF03446_consen 65 V 65 (163)
T ss_dssp S
T ss_pred c
Confidence 5
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0053 Score=55.85 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=56.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEecc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAA 98 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~ 98 (390)
||.|.|||||.|..|++.|...+..++..+..... .+ ..+..+++.++|+||-+..
T Consensus 3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~---------------------~~---~~~~~~~~~~~D~vFlalp 58 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR---------------------KD---AAERAKLLNAADVAILCLP 58 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc---------------------cC---cCCHhHhhcCCCEEEECCC
Confidence 79999999999999999999998888777754321 00 1123455567999998763
Q ss_pred ccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 99 ICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 99 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
.. .+..++..+.+.+.++|=.|+..
T Consensus 59 ~~------------------~s~~~~~~~~~~g~~VIDlSadf 83 (310)
T TIGR01851 59 DD------------------AAREAVSLVDNPNTCIIDASTAY 83 (310)
T ss_pred HH------------------HHHHHHHHHHhCCCEEEECChHH
Confidence 11 13445555555667888888754
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.016 Score=51.29 Aligned_cols=90 Identities=11% Similarity=-0.009 Sum_probs=68.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vi 94 (390)
|++|||+|||+= |+.|++.|.+. |+.|++....+... .. ...+.++.|-+.+.+.+.+++++ +++||
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~-g~~v~~Svat~~g~--~~-------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI 70 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAA-GVDIVLSLAGRTGG--PA-------DLPGPVRVGGFGGAEGLAAYLREEGIDLVI 70 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhC-CCeEEEEEccCCCC--cc-------cCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence 578999999974 99999999988 89888766555322 11 24678888998899999999984 99999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCC
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~ 132 (390)
+..= |. . ..-+.++.++|++.+.
T Consensus 71 DATH----------Pf---A--~~is~~a~~ac~~~~i 93 (248)
T PRK08057 71 DATH----------PY---A--AQISANAAAACRALGI 93 (248)
T ss_pred ECCC----------cc---H--HHHHHHHHHHHHHhCC
Confidence 9751 21 1 2337888999999983
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0054 Score=58.84 Aligned_cols=170 Identities=16% Similarity=0.056 Sum_probs=100.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhh--CC----CeEEEEecC--Chhhhccc-ccccc--CCCCCeeEEeCCCCChhHHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLE--TP----HKILALDVY--NDKIKHLL-EPESQ--TGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~--~g----~~V~~~~r~--~~~~~~~~-~~~~~--~~~~~i~~~~~D~~d~~~~~ 84 (390)
.+-+|+||||+|.||.+|+-.+.+= .| ..+++++.. ........ +.... .....+.+.. .-.
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-------~~~ 194 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-------DLD 194 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-------CCH
Confidence 3468999999999999999999971 12 335666663 22211110 00000 0011222221 224
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccc----cccccCCCCCCCCCC
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEV----YGKTIGSFLPKDSPL 157 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~v----y~~~~~~~~~e~~~~ 157 (390)
+.++++|+||-+||... ....+....+..|+.-.+.+.++..+++ .+++.+.|--+ |-.. +..|
T Consensus 195 ea~~daDvvIitag~pr--k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~------k~ap- 265 (452)
T cd05295 195 VAFKDAHVIVLLDDFLI--KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILI------KYAP- 265 (452)
T ss_pred HHhCCCCEEEECCCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHH------HHcC-
Confidence 66788999999999753 2344667788899999999988887776 56777765111 0000 0000
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 221 (390)
-..+.+.-|.+....-++....+++.+++...++-..|.|.+.+
T Consensus 266 --------------------giP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~ 309 (452)
T cd05295 266 --------------------SIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG 309 (452)
T ss_pred --------------------CCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence 00123344555555445555566777888888877788887654
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.007 Score=56.04 Aligned_cols=117 Identities=17% Similarity=0.136 Sum_probs=74.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhc-ccccccc-C-CCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKH-LLEPESQ-T-GADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~-~~~~~~~-~-~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
++.+||.|.| +|.+|+.++..|... | .+|++++.++..... ..+.... . .....++... . ++ +.++++
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~-gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~---d~-~~l~~a 75 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLK-NLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--N---NY-EDIAGS 75 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--C---CH-HHhCCC
Confidence 3557999999 599999999998887 7 489999987764311 1110000 0 0111222210 1 23 356889
Q ss_pred cEEEEeccccCCccc---cCChhHHHHHhhhhHHHHHHHHHhCC-C-cEEEeec
Q 016370 91 DLTINLAAICTPADY---NTRPLDTIYSNFIDALPVVKYCSENN-K-RLIHFST 139 (390)
Q Consensus 91 d~Vih~a~~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~-~-~~v~~Ss 139 (390)
|+||.+++....+.. ..+..+.+..|+.-.+.+++.+.+.. . .+|.+|-
T Consensus 76 DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 76 DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999987642211 01445667788888888888888887 3 5666664
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.013 Score=51.80 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=71.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc------------------cCCCC--CeeEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES------------------QTGAD--RIQFH 73 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~--~i~~~ 73 (390)
.++..+|+|.| .|-+|+.++..|...+--+++++|.+.-...++.+... ...-+ .++.+
T Consensus 21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 45667899999 67899999999999833568888775433222221100 00012 23344
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
...+. .+.+.+++.++|+||.+... ......+-++|.+.++.+|+.++...+|.
T Consensus 100 ~~~i~-~~~~~~~~~~~DlVvd~~D~-----------------~~~r~~ln~~~~~~~ip~v~~~~~g~~G~ 153 (240)
T TIGR02355 100 NAKLD-DAELAALIAEHDIVVDCTDN-----------------VEVRNQLNRQCFAAKVPLVSGAAIRMEGQ 153 (240)
T ss_pred eccCC-HHHHHHHhhcCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCCEEEEEecccEeE
Confidence 33343 45677888899999988632 11123345788888899999887666554
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0054 Score=55.53 Aligned_cols=56 Identities=14% Similarity=0.257 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|.|++|.+|+.++..|+++ |.+|+++.|+. ..+.+.++++|+|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t----------------------------~~L~~~~~~aDIv 206 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRT----------------------------QNLPELVKQADII 206 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCc----------------------------hhHHHHhccCCEE
Confidence 468899999999999999999999998 78998887632 2355566889999
Q ss_pred EEecc
Q 016370 94 INLAA 98 (390)
Q Consensus 94 ih~a~ 98 (390)
|++.|
T Consensus 207 I~AtG 211 (283)
T PRK14192 207 VGAVG 211 (283)
T ss_pred EEccC
Confidence 99986
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0058 Score=55.64 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|. |.+|+.+++.|... |.+|++++|++........ .+...+ ..+++.+++.++|+|
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~-------~g~~~~-----~~~~l~~~l~~aDiV 213 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSAL-GARVFVGARSSADLARITE-------MGLIPF-----PLNKLEEKVAEIDIV 213 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-------CCCeee-----cHHHHHHHhccCCEE
Confidence 567899999996 77999999999998 8999999998765433221 122211 245577888899999
Q ss_pred EEec
Q 016370 94 INLA 97 (390)
Q Consensus 94 ih~a 97 (390)
|++.
T Consensus 214 int~ 217 (287)
T TIGR02853 214 INTI 217 (287)
T ss_pred EECC
Confidence 9976
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.017 Score=55.38 Aligned_cols=115 Identities=17% Similarity=0.098 Sum_probs=76.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhh-------CC-CeEEEEecCChhhhccc-cccccC--CCCCeeEEeCCCCChhHHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLE-------TP-HKILALDVYNDKIKHLL-EPESQT--GADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~-------~g-~~V~~~~r~~~~~~~~~-~~~~~~--~~~~i~~~~~D~~d~~~~~ 84 (390)
++-||.|+|++|.||.+++..|... +- .+++.+++..+...... ++.... ....+.+..+ + .
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----y 171 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----Y 171 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----H
Confidence 3468999999999999999999875 11 36888888776543221 110000 0012211111 1 3
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHh-CC--CcEEEeec
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE-NN--KRLIHFST 139 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~--~~~v~~Ss 139 (390)
+.++++|+||-+||... ....+..+.++.|+.-.+.+.+...+ .+ ..+|.+|-
T Consensus 172 e~~kdaDiVVitAG~pr--kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 172 EVFQDAEWALLIGAKPR--GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred HHhCcCCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 45678999999999753 23456778889999999999999988 46 56666664
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0081 Score=58.07 Aligned_cols=75 Identities=12% Similarity=0.202 Sum_probs=55.3
Q ss_pred CCCCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC
Q 016370 14 PIKPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 14 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~ 77 (390)
++.+|+||||+| ||-.|..|++.+..+ |++|+++.-... .. ...+++++..
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~-GA~VtlI~Gp~~-~~---------~p~~v~~i~V-- 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAA-GAEVTLISGPVD-LA---------DPQGVKVIHV-- 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHC-CCcEEEEeCCcC-CC---------CCCCceEEEe--
Confidence 578999999987 799999999999999 999999874321 11 1245666653
Q ss_pred CChhHHHHhhcc---ccEEEEeccccC
Q 016370 78 KHDSRLEGLIKM---ADLTINLAAICT 101 (390)
Q Consensus 78 ~d~~~~~~~~~~---~d~Vih~a~~~~ 101 (390)
...+++.+++.. .|++|++|+..+
T Consensus 320 ~ta~eM~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 320 ESARQMLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred cCHHHHHHHHHhhCCCCEEEEeccccc
Confidence 344445444432 799999999875
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0068 Score=54.59 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=29.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
||||.|.|++|.+|+.+++.+.+.++.++.++..
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 4799999999999999999999877899777543
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.014 Score=54.35 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=58.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEE----eCC--CCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH----RLN--IKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~----~~D--~~d~~~~~~~~~~~d 91 (390)
|||.|.| +||+|-.....|.+. ||+|++++..+++...+.....+-..++++-+ ..+ ++-..+.+.+++..|
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~-GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~ad 78 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAEL-GHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDAD 78 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCC
Confidence 6899999 999999999999998 99999999999888776654333222222111 111 333345777888899
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
++|-+.+..
T Consensus 79 v~fIavgTP 87 (414)
T COG1004 79 VVFIAVGTP 87 (414)
T ss_pred EEEEEcCCC
Confidence 999888754
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.07 Score=48.34 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=55.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vi 94 (390)
..+|||-|.||.+|+.+.+.|+.. |+++++ .-++.... .. ...+.-...+.++.+. +|.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~-g~~~v~-~V~p~~~~-----------~~----v~G~~~y~sv~dlp~~~~~Dlav 68 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAY-GTNIVG-GVTPGKGG-----------TT----VLGLPVFDSVKEAVEETGANASV 68 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhC-CCCEEE-EECCCCCc-----------ce----ecCeeccCCHHHHhhccCCCEEE
Confidence 358999999999999999999887 777444 32222100 00 1122223346666554 78888
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
-+... ..+..+++.|.+.| +.+|.+|+
T Consensus 69 i~vpa------------------~~v~~~l~e~~~~Gvk~avIis~ 96 (286)
T TIGR01019 69 IFVPA------------------PFAADAIFEAIDAGIELIVCITE 96 (286)
T ss_pred EecCH------------------HHHHHHHHHHHHCCCCEEEEECC
Confidence 77632 12456677777788 77777776
|
ATP citrate lyases appear to form an outgroup. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.021 Score=50.68 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=66.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+|||+|||+= |+.|+..|.++ |+ |++-.-.+-....... .....+++.+-+.+.+.+.+++++ ++.||+
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~-g~-v~~sv~t~~g~~~~~~-----~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID 72 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEA-GY-VIVSVATSYGGELLKP-----ELPGLEVRVGRLGDEEGLAEFLRENGIDAVID 72 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhc-CC-EEEEEEhhhhHhhhcc-----ccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 79999999975 89999999999 77 5554443322222211 124678888999899999999974 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCC
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~ 132 (390)
.. +|. . ...+.++.++|++.+.
T Consensus 73 AT----------HPf---A--~~is~na~~a~~~~~i 94 (249)
T PF02571_consen 73 AT----------HPF---A--AEISQNAIEACRELGI 94 (249)
T ss_pred CC----------Cch---H--HHHHHHHHHHHhhcCc
Confidence 75 121 1 2337889999999983
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0063 Score=63.22 Aligned_cols=158 Identities=16% Similarity=0.175 Sum_probs=103.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCCh-------hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYND-------KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~-------~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
|..+|+||-|-.|-.|++.|.++ |.+-.++ +|+-- ...++.+. +-.+.+-.-|++..+.-..++..
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~R-Gar~lVLtSRsGirtGYQa~~vrrWr~~-----GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQR-GARKLVLTSRSGIRTGYQALMVRRWRRR-----GVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHhc-CceEEEEeccccchhhHHHHHHHHHHhc-----CeEEEEecccchhhhhHHHHHHH
Confidence 67999999999999999999999 8775555 44321 11222221 12334445577776666666664
Q ss_pred ------ccEEEEeccccCCcccc-CChhH---HHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ------ADLTINLAAICTPADYN-TRPLD---TIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ------~d~Vih~a~~~~~~~~~-~~~~~---~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+-.|||+|+.....-.. +++.. .-+.-+.+|.+|=...++.- +.||.+||.+.=....
T Consensus 1843 s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~--------- 1913 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA--------- 1913 (2376)
T ss_pred hhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC---------
Confidence 78899999877432222 22222 22235667777766666554 7899999975422211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeeccee
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNW 215 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i 215 (390)
..+.||.+-.+.|+++++- +..|+|.+.+.-|.|
T Consensus 1914 ------------------------GQtNYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 ------------------------GQTNYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred ------------------------cccccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence 2336999999999999875 456899888887765
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.019 Score=54.16 Aligned_cols=115 Identities=16% Similarity=0.072 Sum_probs=72.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe----EEE--E--ecCChhhhccc-ccccc--CCCCCeeEEeCCCCChhHHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK----ILA--L--DVYNDKIKHLL-EPESQ--TGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~----V~~--~--~r~~~~~~~~~-~~~~~--~~~~~i~~~~~D~~d~~~~~ 84 (390)
++-||.|+|++|.+|++++..|...+-.. |.+ + ++..+...... +.... .....+.+..+ -.
T Consensus 43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~-------~y 115 (387)
T TIGR01757 43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID-------PY 115 (387)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC-------CH
Confidence 45699999999999999999999862222 333 3 55554332211 11000 00112221111 13
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeec
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFST 139 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss 139 (390)
+.++++|+||-+||... ....+..+.+..|+.-.+.+.....++. .++|.+|-
T Consensus 116 ~~~kdaDIVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 116 EVFEDADWALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred HHhCCCCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 55678999999999753 2345667788899999999999888843 56666664
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.022 Score=50.12 Aligned_cols=114 Identities=15% Similarity=0.227 Sum_probs=72.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-------------------cC--CCCCeeE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-------------------QT--GADRIQF 72 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-------------------~~--~~~~i~~ 72 (390)
.++..+|+|.| .|-+|++++..|...+-.+++++|...-...++.+... .. ..-.++.
T Consensus 24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~ 102 (231)
T PRK08328 24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET 102 (231)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence 35567899999 67799999999999833568888765322221111000 00 0123444
Q ss_pred EeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
+...+. .+.+.++++++|+||.+.... ..-..+-++|++.+..+|+.++...||.-
T Consensus 103 ~~~~~~-~~~~~~~l~~~D~Vid~~d~~-----------------~~r~~l~~~~~~~~ip~i~g~~~g~~G~v 158 (231)
T PRK08328 103 FVGRLS-EENIDEVLKGVDVIVDCLDNF-----------------ETRYLLDDYAHKKGIPLVHGAVEGTYGQV 158 (231)
T ss_pred EeccCC-HHHHHHHHhcCCEEEECCCCH-----------------HHHHHHHHHHHHcCCCEEEEeeccCEEEE
Confidence 455553 455777888899999886421 11223446788888999999998877764
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0065 Score=56.79 Aligned_cols=77 Identities=12% Similarity=0.133 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----cc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----MA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----~~ 90 (390)
-+++.|||.||+|-+|+..++.+... +..+++..++.+..+...+. +.. ...|+.+++..+...+ ++
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~l-------GAd-~vvdy~~~~~~e~~kk~~~~~~ 226 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA-GAIKVVTACSKEKLELVKKL-------GAD-EVVDYKDENVVELIKKYTGKGV 226 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc-CCcEEEEEcccchHHHHHHc-------CCc-EeecCCCHHHHHHHHhhcCCCc
Confidence 36689999999999999999999998 65555555555555544432 211 2356777655555444 49
Q ss_pred cEEEEecccc
Q 016370 91 DLTINLAAIC 100 (390)
Q Consensus 91 d~Vih~a~~~ 100 (390)
|+|++|++..
T Consensus 227 DvVlD~vg~~ 236 (347)
T KOG1198|consen 227 DVVLDCVGGS 236 (347)
T ss_pred cEEEECCCCC
Confidence 9999999854
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0079 Score=55.07 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|. |.+|+.++..|... |.+|++++|++........ .+..++ ..+.+.+.+.++|+|
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~-------~G~~~~-----~~~~l~~~l~~aDiV 214 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKAL-GANVTVGARKSAHLARITE-------MGLSPF-----HLSELAEEVGKIDII 214 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-------cCCeee-----cHHHHHHHhCCCCEE
Confidence 456789999996 77999999999998 8999999998765433222 123322 234577788899999
Q ss_pred EEec
Q 016370 94 INLA 97 (390)
Q Consensus 94 ih~a 97 (390)
|+++
T Consensus 215 I~t~ 218 (296)
T PRK08306 215 FNTI 218 (296)
T ss_pred EECC
Confidence 9975
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.013 Score=59.77 Aligned_cols=104 Identities=7% Similarity=0.104 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccc--c---------------CC--CCCeeEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPES--Q---------------TG--ADRIQFH 73 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~--~---------------~~--~~~i~~~ 73 (390)
++..+|+|.|. | +|++++..|... | -++++++...-...++.+... . .+ .-.|+.+
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~Lara-GvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~ 181 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAE-GLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF 181 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHc-cCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 45678999999 8 999999999999 6 478888876433333222100 0 01 1245556
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
...++ .+.+.+++.++|+||.|.-. +..-..|-++|.+.++.+|+.++
T Consensus 182 ~~~i~-~~n~~~~l~~~DlVvD~~D~-----------------~~~R~~ln~~a~~~~iP~i~~~~ 229 (722)
T PRK07877 182 TDGLT-EDNVDAFLDGLDVVVEECDS-----------------LDVKVLLREAARARRIPVLMATS 229 (722)
T ss_pred eccCC-HHHHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEcC
Confidence 66666 57789999999999998731 22122344788888888998885
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.01 Score=57.93 Aligned_cols=76 Identities=11% Similarity=-0.035 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~V 93 (390)
+.+++|+|||++| +|...++.|.+. |++|++.++............ ...++++..+... .. ++. .+|.|
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~-G~~V~~~d~~~~~~~~~~~~l---~~~g~~~~~~~~~--~~---~~~~~~d~v 72 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKL-GANVTVNDGKPFSENPEAQEL---LEEGIKVICGSHP--LE---LLDEDFDLM 72 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHC-CCEEEEEcCCCccchhHHHHH---HhcCCEEEeCCCC--HH---HhcCcCCEE
Confidence 4578999999998 999999999998 999999987653211110000 0125555544322 11 233 38999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|..+|+.
T Consensus 73 V~s~gi~ 79 (447)
T PRK02472 73 VKNPGIP 79 (447)
T ss_pred EECCCCC
Confidence 9998865
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0085 Score=56.70 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+.+|+|+|+ |-+|...++.|... |.+|++++|++...+.+.... + ..+..+..+.+.+.+.+.++|+||
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~------g-~~v~~~~~~~~~l~~~l~~aDvVI 235 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEF------G-GRIHTRYSNAYEIEDAVKRADLLI 235 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhc------C-ceeEeccCCHHHHHHHHccCCEEE
Confidence 45678999986 89999999999998 899999999876544332210 1 122345567788888899999999
Q ss_pred Eeccc
Q 016370 95 NLAAI 99 (390)
Q Consensus 95 h~a~~ 99 (390)
.++..
T Consensus 236 ~a~~~ 240 (370)
T TIGR00518 236 GAVLI 240 (370)
T ss_pred Ecccc
Confidence 98754
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.03 Score=50.45 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=27.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
||||.|.|. |.||+.+++.|.+.++.++.++..
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~ 33 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIV 33 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEE
Confidence 579999998 999999999999876777766553
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0082 Score=51.60 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=49.7
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cc
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MA 90 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~ 90 (390)
...+++|+|+|+|. |-+|+++++.|.+. |++|++.++++.....+... -+.+.+. . .+++. .+
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~------~g~~~v~--~------~~l~~~~~ 86 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEE-GAKLIVADINEEAVARAAEL------FGATVVA--P------EEIYSVDA 86 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHH------cCCEEEc--c------hhhccccC
Confidence 34678899999996 68999999999998 99999999887654433221 0222221 1 22333 59
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+++.+|.
T Consensus 87 Dv~vp~A~ 94 (200)
T cd01075 87 DVFAPCAL 94 (200)
T ss_pred CEEEeccc
Confidence 99998875
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.015 Score=53.06 Aligned_cols=24 Identities=25% Similarity=0.437 Sum_probs=22.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE 40 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~ 40 (390)
+++|.|.||||.+|+.+++.|.++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~ 24 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEER 24 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhc
Confidence 478999999999999999999995
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.015 Score=54.42 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=49.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccc-ccccCCCCCeeEEeCCCCC----hhHHHHhh-cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGADRIQFHRLNIKH----DSRLEGLI-KM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~i~~~~~D~~d----~~~~~~~~-~~ 89 (390)
.+.+|||+||+|.+|..+++.+... |.+|+++++++++...+.+ . ++..+ .|..+ .+.+.... .+
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~l-------Ga~~v-i~~~~~~~~~~~i~~~~~~g 221 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKL-------GFDDA-FNYKEEPDLDAALKRYFPNG 221 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhc-------CCcee-EEcCCcccHHHHHHHhCCCC
Confidence 4679999999999999999988888 9999998888766555433 1 22211 12111 12233332 25
Q ss_pred ccEEEEecc
Q 016370 90 ADLTINLAA 98 (390)
Q Consensus 90 ~d~Vih~a~ 98 (390)
+|+||++.+
T Consensus 222 vd~v~d~~g 230 (338)
T cd08295 222 IDIYFDNVG 230 (338)
T ss_pred cEEEEECCC
Confidence 899999876
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.012 Score=56.68 Aligned_cols=81 Identities=20% Similarity=0.258 Sum_probs=51.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE-----E-eCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF-----H-RLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~-----~-~~D~~d~~~~~~~~~~~d 91 (390)
|+|.|.| .|++|..++..|.+. |++|+++++++.....+......-..++++- + .+-+.-..+..++++++|
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~-G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad 78 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADL-GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD 78 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhc-CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence 5799998 899999999999998 9999999998877665443211000011000 0 011111224556677899
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
+||-+....
T Consensus 79 vvii~vpt~ 87 (411)
T TIGR03026 79 VIIICVPTP 87 (411)
T ss_pred EEEEEeCCC
Confidence 999887643
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0076 Score=55.49 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=64.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh-HHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS-RLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~-~~~~~~~~~d~Vih 95 (390)
+++||+.| +||+.+-++..|.++...+|++..|...+.+.+.. +..++.+..|+.+.+ .++..++.-|.|+-
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~------~~~~~av~ldv~~~~~~L~~~v~~~D~viS 74 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK------GINIKAVSLDVADEELALRKEVKPLDLVIS 74 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhc------CCCccceEEEccchHHHHHhhhcccceeee
Confidence 46899999 89999999999999867899999998877776655 245888999999988 89999999999998
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+.=
T Consensus 75 LlP 77 (445)
T KOG0172|consen 75 LLP 77 (445)
T ss_pred ecc
Confidence 763
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.034 Score=52.35 Aligned_cols=110 Identities=13% Similarity=0.044 Sum_probs=71.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccc----------------------cccCCCCCe
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEP----------------------ESQTGADRI 70 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~----------------------~~~~~~~~i 70 (390)
+++..+|+|.|+ |-+|+.+++.|... | -++++++...-....+.+. .++ .-.+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--~v~v 100 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGA-GVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP--DVKV 100 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHc-CCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC--CcEE
Confidence 456679999995 88999999999998 6 4688887754222222111 011 1234
Q ss_pred eEEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 71 ~~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
+.+...++. +...++++++|+||.+... ...-..+-++|.+.++.+|+.++...+|.
T Consensus 101 ~~~~~~i~~-~~~~~~~~~~DvVvd~~d~-----------------~~~r~~~n~~c~~~~ip~v~~~~~g~~g~ 157 (355)
T PRK05597 101 TVSVRRLTW-SNALDELRDADVILDGSDN-----------------FDTRHLASWAAARLGIPHVWASILGFDAQ 157 (355)
T ss_pred EEEEeecCH-HHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEEecCeEE
Confidence 445555553 4567788899999998742 11122345688888889999987666554
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.013 Score=49.43 Aligned_cols=75 Identities=19% Similarity=0.233 Sum_probs=52.9
Q ss_pred CCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 9 DLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 9 ~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
......+.+++|.|.| .|-||+.+++.|..- |.+|++++|.......... ..+ ....+.+++.
T Consensus 28 ~~~~~~l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~-------~~~--------~~~~l~ell~ 90 (178)
T PF02826_consen 28 RFPGRELRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADE-------FGV--------EYVSLDELLA 90 (178)
T ss_dssp TTTBS-STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHH-------TTE--------EESSHHHHHH
T ss_pred CCCccccCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCChhhhccc-------ccc--------eeeehhhhcc
Confidence 3444567899999998 799999999999987 9999999998865431111 011 2235788889
Q ss_pred cccEEEEecccc
Q 016370 89 MADLTINLAAIC 100 (390)
Q Consensus 89 ~~d~Vih~a~~~ 100 (390)
++|+|+.+.-.+
T Consensus 91 ~aDiv~~~~plt 102 (178)
T PF02826_consen 91 QADIVSLHLPLT 102 (178)
T ss_dssp H-SEEEE-SSSS
T ss_pred hhhhhhhhhccc
Confidence 999999887543
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.03 Score=48.55 Aligned_cols=112 Identities=20% Similarity=0.230 Sum_probs=70.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccc-------------------ccCCCCCeeEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPE-------------------SQTGADRIQFH 73 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~-------------------~~~~~~~i~~~ 73 (390)
+++..+|+|.| .|-+|+.+++.|.+. |. +++++|.+.-...++.+.. .....-.++.+
T Consensus 25 ~L~~~~V~ViG-~GglGs~ia~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 25 KLKKAKVGIAG-AGGLGSNIAVALARS-GVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHhCCCEEEEC-cCHHHHHHHHHHHHc-CCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 35667899999 588999999999998 65 5888888632111111100 00001234445
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-CCcEEEeeccccccc
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-NKRLIHFSTCEVYGK 145 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~ 145 (390)
...+.+ +.+.++++++|+||.+.. |......+.+.|.+. +..+|+.+...-|+.
T Consensus 103 ~~~i~~-~~~~~~~~~~DvVI~a~D-----------------~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~~ 157 (212)
T PRK08644 103 NEKIDE-DNIEELFKDCDIVVEAFD-----------------NAETKAMLVETVLEHPGKKLVAASGMAGYGD 157 (212)
T ss_pred eeecCH-HHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCCEEEeehhhccCC
Confidence 445544 456677888999998842 122234566778887 788998876555544
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=54.96 Aligned_cols=105 Identities=11% Similarity=0.184 Sum_probs=61.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccC----CCCCee-EEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQT----GADRIQ-FHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~----~~~~i~-~~~~D~~d~~~~~~~~~~~ 90 (390)
|+||.|.|. |-||+.+++.+.+.++.++.++...... ...+....... ...... +-..++.-...+..++.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 479999998 9999999999998778998887653321 11111100000 000000 0000111112345556789
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
|+||.|++... ....++.+.++|+++|+.|+.
T Consensus 80 DVVIdaT~~~~------------------~~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGV------------------GAKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred CEEEECCCchh------------------hHHHHHHHHHCCCEEEEcCCC
Confidence 99999975321 344556777788888887774
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.011 Score=56.09 Aligned_cols=68 Identities=21% Similarity=0.165 Sum_probs=53.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
||+|+|.|| |.+|+-++..+.+. |++|++++..+....... .-.++.+|+.|.+.+.++++.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~l-G~~v~~~d~~~~~pa~~~---------ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPL-GYKVIVLDPDPDSPAAQV---------ADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHc-CCEEEEEeCCCCCchhHh---------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 578999996 79999999999998 999999998654322110 124566899999999999999998753
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.022 Score=54.11 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=70.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccc-------------------ccccCCCC--Cee
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLE-------------------PESQTGAD--RIQ 71 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~-------------------~~~~~~~~--~i~ 71 (390)
+++..+|+|.|+ |-+|+.++..|... |. +++++++..-...++.+ ... ...+ .++
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~-Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~-~~np~v~v~ 208 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAA-GVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLA-ALNPDVQVE 208 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHc-CCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHH-HHCCCCEEE
Confidence 456678999975 77999999999998 65 68888886211111110 000 0012 233
Q ss_pred EEeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 72 ~~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
.+...+. .+.+.++++++|+||++.... ..-..+-++|++.+..+|+.+....+|.
T Consensus 209 ~~~~~~~-~~~~~~~~~~~D~Vv~~~d~~-----------------~~r~~ln~~~~~~~ip~i~~~~~g~~g~ 264 (376)
T PRK08762 209 AVQERVT-SDNVEALLQDVDVVVDGADNF-----------------PTRYLLNDACVKLGKPLVYGAVFRFEGQ 264 (376)
T ss_pred EEeccCC-hHHHHHHHhCCCEEEECCCCH-----------------HHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 4444444 345777888999999987421 1122355788899899999987665554
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.011 Score=53.22 Aligned_cols=58 Identities=14% Similarity=0.242 Sum_probs=49.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|+++.+|+.++..|+++ |.+|+++.++. .++.+.++++|+|
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t----------------------------~~l~~~~~~ADIV 205 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRS----------------------------KDMASYLKDADVI 205 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCc----------------------------hhHHHHHhhCCEE
Confidence 478899999999999999999999998 89999887632 2467778889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-+.+..
T Consensus 206 IsAvg~p 212 (286)
T PRK14175 206 VSAVGKP 212 (286)
T ss_pred EECCCCC
Confidence 9988753
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.021 Score=51.57 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=46.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhh-CCCeEEE-EecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLE-TPHKILA-LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~-~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|++++|.|.| .|.||+.+++.|.+. +++++.+ .+|.+.....+... -+. ..-.+++++++.++|+
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~------~g~------~~~~~~~eell~~~D~ 70 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG------LRR------PPPVVPLDQLATHADI 70 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh------cCC------CcccCCHHHHhcCCCE
Confidence 5668999999 799999999999873 5788775 45555443322211 010 0011235555677999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
|+-++.
T Consensus 71 Vvi~tp 76 (271)
T PRK13302 71 VVEAAP 76 (271)
T ss_pred EEECCC
Confidence 999875
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.04 Score=50.53 Aligned_cols=109 Identities=25% Similarity=0.265 Sum_probs=71.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccccc--------------------ccCCCCCeeEEeCCC
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPE--------------------SQTGADRIQFHRLNI 77 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~i~~~~~D~ 77 (390)
||||.|+ |-+|..+++.|... | .++.++|...-....+.+.. .....-.++.+..++
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~-Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i 78 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLT-GFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANI 78 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHh-cCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccC
Confidence 5899995 88999999999998 6 56888877542222221110 000112455666777
Q ss_pred CChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 78 ~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
.+.....+.++++|+||.+.. |...-..+-+.|+..+..+|..++.+.+|..
T Consensus 79 ~~~~~~~~f~~~~DvVv~a~D-----------------n~~ar~~in~~c~~~~ip~I~~gt~G~~G~v 130 (312)
T cd01489 79 KDPDFNVEFFKQFDLVFNALD-----------------NLAARRHVNKMCLAADVPLIESGTTGFLGQV 130 (312)
T ss_pred CCccchHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHCCCCEEEEecCcceeEE
Confidence 765444577788999998753 2222334557888888899999887776654
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.019 Score=52.81 Aligned_cols=110 Identities=19% Similarity=0.118 Sum_probs=72.1
Q ss_pred EEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhcccccccc-C-CCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 20 ICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQ-T-GADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~-~-~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|.|.|+ |.+|+.++..|+.. | .+++++++..+........... . ......+..+ .| .+.++++|+||.
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~-~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIi 72 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAK-GLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEE
Confidence 467885 88999999999987 6 6799999977543322211000 0 0011222211 11 246788999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+++.... ...+....+..|+.-.+.+++..++++ ..+|.+|-
T Consensus 73 tag~p~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 73 TAGAPRK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 9987532 234556778889999999999998887 55666553
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0054 Score=55.72 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+.+++|+|+|+ |-+|+.++..|.+. | .+|++++|+....+.+.+.... ...+.+ ++ .....+.++|+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~--~~~~~~---~~----~~~~~~~~~Di 188 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGA--LGKAEL---DL----ELQEELADFDL 188 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhh--ccceee---cc----cchhccccCCE
Confidence 356789999996 99999999999998 7 7899999987766554332110 000111 11 23455677999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||++....
T Consensus 189 vInaTp~g 196 (278)
T PRK00258 189 IINATSAG 196 (278)
T ss_pred EEECCcCC
Confidence 99998654
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.017 Score=58.50 Aligned_cols=71 Identities=10% Similarity=0.088 Sum_probs=60.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
++|+|.| .|-+|+.+++.|.++ |+++++++.+++..+...+ .+..++.||.++++.++++ ++++|+||-+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRK-------YGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHh-------CCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 5799998 899999999999998 9999999999887666543 4788999999999988876 3459998866
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 472 ~ 472 (601)
T PRK03659 472 C 472 (601)
T ss_pred e
Confidence 5
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.025 Score=52.44 Aligned_cols=73 Identities=25% Similarity=0.284 Sum_probs=49.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~~~~d~Vi 94 (390)
.+.+|||+||+|.+|..+++.+... |.+|+++.+++.....+... +...+. +..+ .+.+... .++|+||
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~-~~~d~v~ 231 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKEL-------GADYVI-DGSKFSEDVKKL-GGADVVI 231 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHc-------CCcEEE-ecHHHHHHHHhc-cCCCEEE
Confidence 3568999999999999999999998 99999998876554443221 111111 2211 2223332 2699999
Q ss_pred Eecc
Q 016370 95 NLAA 98 (390)
Q Consensus 95 h~a~ 98 (390)
++++
T Consensus 232 ~~~g 235 (332)
T cd08259 232 ELVG 235 (332)
T ss_pred ECCC
Confidence 9986
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.03 Score=52.01 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=49.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC---hhH-HHHhh-ccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH---DSR-LEGLI-KMA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d---~~~-~~~~~-~~~ 90 (390)
.+.+|||+||+|-+|..+++.+... |.+|+++++++++...+.+. ++..+ .|..+ ... +.... +++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~-G~~Vi~~~~s~~~~~~~~~l-------Ga~~v-i~~~~~~~~~~~~~~~~~~gv 208 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKVAYLKKL-------GFDVA-FNYKTVKSLEETLKKASPDGY 208 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-------CCCEE-EeccccccHHHHHHHhCCCCe
Confidence 4578999999999999999888887 89999998887665554332 22221 12222 111 22222 248
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||++.|
T Consensus 209 dvv~d~~G 216 (325)
T TIGR02825 209 DCYFDNVG 216 (325)
T ss_pred EEEEECCC
Confidence 99999876
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.017 Score=52.09 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=44.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC-CCeEE-EEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET-PHKIL-ALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
||||.|.| .|.+|+.+++.|.+.+ ++++. ++++++.....+.+. .++. -.+++++++.++|+|+
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~------~~~~-------~~~~~~ell~~~DvVv 66 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK------TGAK-------ACLSIDELVEDVDLVV 66 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh------cCCe-------eECCHHHHhcCCCEEE
Confidence 47999999 6999999999999862 46644 456655443332221 0111 1234555567799999
Q ss_pred Eecc
Q 016370 95 NLAA 98 (390)
Q Consensus 95 h~a~ 98 (390)
.|+.
T Consensus 67 i~a~ 70 (265)
T PRK13304 67 ECAS 70 (265)
T ss_pred EcCC
Confidence 9974
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0076 Score=58.38 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=47.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|+|+||+|.+|..+++.|.+. |++|++++|++......... .++.+ .....+.+.++|+||-+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~------~gv~~-------~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKE------LGVEY-------ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHH------cCCee-------ccCHHHHhccCCEEEEec
Confidence 58999999999999999999998 89999999986543222110 12211 123445667799999876
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0058 Score=53.41 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=34.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH 57 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~ 57 (390)
|||.|+||+|.+|+.++..|.+. |++|.+.+|+++....
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~-G~~V~v~~r~~~~~~~ 39 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA-GNKIIIGSRDLEKAEE 39 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-CCEEEEEEcCHHHHHH
Confidence 68999999999999999999998 8999999998765443
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.043 Score=51.88 Aligned_cols=112 Identities=13% Similarity=0.153 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccc------------------cCCCC--CeeE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPES------------------QTGAD--RIQF 72 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~------------------~~~~~--~i~~ 72 (390)
+++..+|+|.| .|-+|+.++..|... | .++++++...-...++.+... ...-+ .++.
T Consensus 38 ~l~~~~VliiG-~GglG~~v~~~La~~-Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 38 RLHNARVLVIG-AGGLGCPAMQSLASA-GVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HhcCCcEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 45667899999 677999999999998 6 578888876322222211100 00112 3444
Q ss_pred EeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
+...++ .+.+.++++++|+||.|... ...-..+-++|.+.+..+|+.+....+|.
T Consensus 116 ~~~~i~-~~~~~~~~~~~DlVid~~Dn-----------------~~~r~~in~~~~~~~iP~v~~~~~g~~G~ 170 (370)
T PRK05600 116 LRERLT-AENAVELLNGVDLVLDGSDS-----------------FATKFLVADAAEITGTPLVWGTVLRFHGE 170 (370)
T ss_pred eeeecC-HHHHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEEecCEEE
Confidence 554554 45577888999999988742 22222344678888888999987665554
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.013 Score=53.10 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=49.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+|+|.|.|.+|.+|+.++..|+++ |++|+++.++.. ++.++.+++|+|
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~-gatVtv~~~~t~----------------------------~l~e~~~~ADIV 206 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQA-HCSVTVVHSRST----------------------------DAKALCRQADIV 206 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEECCCCC----------------------------CHHHHHhcCCEE
Confidence 578999999999999999999999999 999999876431 366777789999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-+.+..
T Consensus 207 Isavg~~ 213 (301)
T PRK14194 207 VAAVGRP 213 (301)
T ss_pred EEecCCh
Confidence 9888743
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.016 Score=54.07 Aligned_cols=94 Identities=12% Similarity=0.013 Sum_probs=54.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCe---EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHK---ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|+|.|.||||.+|+.+++.|..++.+. ++.+....+..+... ..+.....-++.+. ..+.++|+||
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~-------f~~~~~~v~~~~~~----~~~~~vDivf 69 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPS-------FGGTTGTLQDAFDI----DALKALDIII 69 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCC-------CCCCcceEEcCccc----ccccCCCEEE
Confidence 579999999999999999999543665 333333222111110 11112222233332 1346799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCC--cEEEeecc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK--RLIHFSTC 140 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~v~~Ss~ 140 (390)
.+++.. .++.+...+.+.|. .+|=-||+
T Consensus 70 fa~g~~------------------~s~~~~p~~~~aG~~~~VIDnSSa 99 (366)
T TIGR01745 70 TCQGGD------------------YTNEIYPKLRESGWQGYWIDAASS 99 (366)
T ss_pred EcCCHH------------------HHHHHHHHHHhCCCCeEEEECChh
Confidence 998632 25667777888883 44544443
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0095 Score=46.91 Aligned_cols=42 Identities=21% Similarity=0.380 Sum_probs=27.8
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC
Q 016370 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~ 51 (390)
|++|..+.. .++|-|.|+ |-+|.+|++.|.+. ||.|..+..+
T Consensus 1 ~~~~~~~~~-------~l~I~iIGa-GrVG~~La~aL~~a-g~~v~~v~sr 42 (127)
T PF10727_consen 1 MNTPATQAA-------RLKIGIIGA-GRVGTALARALARA-GHEVVGVYSR 42 (127)
T ss_dssp ------------------EEEEECT-SCCCCHHHHHHHHT-TSEEEEESSC
T ss_pred CCccccCCC-------ccEEEEECC-CHHHHHHHHHHHHC-CCeEEEEEeC
Confidence 566655332 358999996 99999999999999 9999887543
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.037 Score=51.35 Aligned_cols=74 Identities=20% Similarity=0.190 Sum_probs=50.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhh-cccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLI-KMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~-~~~d 91 (390)
.+.+|||+||+|-+|..+++.+... |.+|++++++++....+.+. +++.+ .|..+. +.+..+. .++|
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~-------Ga~~v-i~~~~~~~~~~v~~~~~~gvd 213 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKEL-------GFDAV-FNYKTVSLEEALKEAAPDGID 213 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-------CCCEE-EeCCCccHHHHHHHHCCCCcE
Confidence 4579999999999999999998888 99999998877665554432 22221 122222 2333332 2489
Q ss_pred EEEEecc
Q 016370 92 LTINLAA 98 (390)
Q Consensus 92 ~Vih~a~ 98 (390)
+||++.+
T Consensus 214 ~vld~~g 220 (329)
T cd08294 214 CYFDNVG 220 (329)
T ss_pred EEEECCC
Confidence 9999876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.012 Score=55.90 Aligned_cols=54 Identities=17% Similarity=0.264 Sum_probs=43.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+++|.|.||.|.+|..+++.|.+. |++|++++++.. +...+++.++|+||-
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~-G~~V~~~d~~~~---------------------------~~~~~~~~~aDlVil 148 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS-GYQVRILEQDDW---------------------------DRAEDILADAGMVIV 148 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC-CCeEEEeCCCcc---------------------------hhHHHHHhcCCEEEE
Confidence 3478999999999999999999999 999999998421 123455677898888
Q ss_pred ec
Q 016370 96 LA 97 (390)
Q Consensus 96 ~a 97 (390)
+.
T Consensus 149 av 150 (374)
T PRK11199 149 SV 150 (374)
T ss_pred eC
Confidence 76
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.054 Score=47.52 Aligned_cols=108 Identities=13% Similarity=0.179 Sum_probs=65.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc------------------cCCCC--CeeEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES------------------QTGAD--RIQFH 73 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~--~i~~~ 73 (390)
++...+|+|.| .|-+|+++++.|.+.+-.++++++...-...++.+... ...-+ .++.+
T Consensus 8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 35567899999 77899999999999833578888775422211111000 00112 33444
Q ss_pred eCCCCChhHHHHhhc-cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 74 RLNIKHDSRLEGLIK-MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
...+. .+.+..++. ++|+||.+... ...-..|.++|++.+..+|...++
T Consensus 87 ~~~i~-~~~~~~l~~~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~ip~I~s~g~ 136 (231)
T cd00755 87 EEFLT-PDNSEDLLGGDPDFVVDAIDS-----------------IRAKVALIAYCRKRKIPVISSMGA 136 (231)
T ss_pred eeecC-HhHHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCCCEEEEeCC
Confidence 44444 345566664 59999988632 222345778999988777776554
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0078 Score=54.99 Aligned_cols=39 Identities=13% Similarity=0.364 Sum_probs=33.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK 56 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 56 (390)
+.++|.|.| +|.+|..++..|.+. |++|+++++++....
T Consensus 2 ~~~kIaViG-aG~mG~~iA~~la~~-G~~V~l~d~~~~~l~ 40 (287)
T PRK08293 2 DIKNVTVAG-AGVLGSQIAFQTAFH-GFDVTIYDISDEALE 40 (287)
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhc-CCeEEEEeCCHHHHH
Confidence 346899998 599999999999988 999999999876443
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.022 Score=54.19 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=48.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE----EeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF----HRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~----~~~D~~d~~~~~~~~~~~d~V 93 (390)
|+|.|.| .|++|..++.. ++. ||+|+++++++.....+......-..++++- -.+.++...+...++.++|+|
T Consensus 1 mkI~VIG-lGyvGl~~A~~-lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLL-IAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred CEEEEEC-CCHHHHHHHHH-HHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 5799996 99999999954 456 8999999999887766654321111111100 011122222244455779999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|-+...
T Consensus 78 ii~Vpt 83 (388)
T PRK15057 78 IIATPT 83 (388)
T ss_pred EEeCCC
Confidence 987643
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0097 Score=55.36 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=49.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
||+|.|.| .|.+|..++..|.+. |++|.+++|++.....+...... ........ ...+.-..+..++++++|+||-
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~ 77 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARN-GHDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILV 77 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEE
Confidence 57999999 599999999999998 99999999987655443321000 00000000 0011112345556778999998
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+.-
T Consensus 78 ~v~ 80 (325)
T PRK00094 78 AVP 80 (325)
T ss_pred eCC
Confidence 763
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.087 Score=47.56 Aligned_cols=113 Identities=10% Similarity=0.070 Sum_probs=69.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc------------------cCCCC--CeeEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES------------------QTGAD--RIQFH 73 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~--~i~~~ 73 (390)
+++..+|+|.| .|-+|+.++..|...+--++.++|.+.-...++.+... ...-+ .++.+
T Consensus 24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~ 102 (287)
T PRK08223 24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF 102 (287)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 35667899999 66799999999999933568888775422222221100 00112 34445
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
...++ .+...+++.++|+||.+.-.. ++..-..+-++|.+.++.+|+.|.....
T Consensus 103 ~~~l~-~~n~~~ll~~~DlVvD~~D~~---------------~~~~r~~ln~~c~~~~iP~V~~~~~g~~ 156 (287)
T PRK08223 103 PEGIG-KENADAFLDGVDVYVDGLDFF---------------EFDARRLVFAACQQRGIPALTAAPLGMG 156 (287)
T ss_pred ecccC-ccCHHHHHhCCCEEEECCCCC---------------cHHHHHHHHHHHHHcCCCEEEEeccCCe
Confidence 55555 345778888999999765211 0111234557889999999998764433
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.013 Score=54.10 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+++|+|.|+ |-+|..+++.|...++.+|++++|++.....+.... +.. ..+.+++.+.+.++|+||
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------g~~-----~~~~~~~~~~l~~aDvVi 243 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------GGN-----AVPLDELLELLNEADVVI 243 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------CCe-----EEeHHHHHHHHhcCCEEE
Confidence 46789999996 999999999999874578999999876554333210 112 223345777788899999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
.+.+..
T Consensus 244 ~at~~~ 249 (311)
T cd05213 244 SATGAP 249 (311)
T ss_pred ECCCCC
Confidence 988643
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.02 Score=46.98 Aligned_cols=58 Identities=12% Similarity=0.240 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+|+|+|.|.++.+|..|+..|+++ |.+|+...... .++++.++++|+|
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~-~atVt~~h~~T----------------------------~~l~~~~~~ADIV 83 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNK-GATVTICHSKT----------------------------KNLQEITRRADIV 83 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHT-T-EEEEE-TTS----------------------------SSHHHHHTTSSEE
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhC-CCeEEeccCCC----------------------------CcccceeeeccEE
Confidence 478999999999999999999999999 89998876543 2366677788999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-++|..
T Consensus 84 Vsa~G~~ 90 (160)
T PF02882_consen 84 VSAVGKP 90 (160)
T ss_dssp EE-SSST
T ss_pred eeeeccc
Confidence 9888754
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.045 Score=50.93 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=49.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC---hhHHHHhhc--ccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH---DSRLEGLIK--MAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d---~~~~~~~~~--~~d 91 (390)
+.+|||+||+|-+|+..++.+... |+.++++..++.+...+.+. +...+. |..+ .+.+.++.. ++|
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~l-------GAd~vi-~y~~~~~~~~v~~~t~g~gvD 213 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKEL-------GADHVI-NYREEDFVEQVRELTGGKGVD 213 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhc-------CCCEEE-cCCcccHHHHHHHHcCCCCce
Confidence 679999999999999999999998 76777777766655543332 222221 1222 233444443 499
Q ss_pred EEEEecc
Q 016370 92 LTINLAA 98 (390)
Q Consensus 92 ~Vih~a~ 98 (390)
+|+++.|
T Consensus 214 vv~D~vG 220 (326)
T COG0604 214 VVLDTVG 220 (326)
T ss_pred EEEECCC
Confidence 9999876
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.18 Score=49.58 Aligned_cols=171 Identities=12% Similarity=0.086 Sum_probs=99.1
Q ss_pred CCCCCCCCEEEEEcCc-hhHHHHHHHHHHhhCCCeEEEEecCCh-hhhcc-cccc--ccCCCCCeeEEeCCCCChhHHHH
Q 016370 11 DGRPIKPVTICMIGAG-GFIGSHLCEKILLETPHKILALDVYND-KIKHL-LEPE--SQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 11 ~~~~~~~~~vlItGat-G~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~-~~~~--~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
+......+-.|||||+ |-||..++..|+.- |.+|++...+-+ ....+ +.+. ........-++..+..+..++..
T Consensus 390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~g-GAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA 468 (866)
T COG4982 390 NGGTYGDKVALVTGASKGSIAAAVVARLLAG-GATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA 468 (866)
T ss_pred CCCCcccceEEEecCCCcchHHHHHHHHHhC-CcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence 3445666789999986 89999999999997 999998765432 21111 1110 01122345556667766666655
Q ss_pred hhc---------------------cccEEEEeccccCCc-cccCChhHH--HHHhhhhHHHHHHHHHhCC--------Cc
Q 016370 86 LIK---------------------MADLTINLAAICTPA-DYNTRPLDT--IYSNFIDALPVVKYCSENN--------KR 133 (390)
Q Consensus 86 ~~~---------------------~~d~Vih~a~~~~~~-~~~~~~~~~--~~~nv~~~~~l~~~~~~~~--------~~ 133 (390)
++. .+|.+|-+|+..-.. .....+... .++-+-...+++-..++.+ .+
T Consensus 469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h 548 (866)
T COG4982 469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH 548 (866)
T ss_pred HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence 552 168899998876321 112233332 3333334445555444443 24
Q ss_pred EEEeecc--cccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC----ccE
Q 016370 134 LIHFSTC--EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG----LEF 207 (390)
Q Consensus 134 ~v~~Ss~--~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~----~~~ 207 (390)
+|...|- ..||. ...|+.+|...|-++.+|..+.+ +..
T Consensus 549 VVLPgSPNrG~FGg------------------------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl 592 (866)
T COG4982 549 VVLPGSPNRGMFGG------------------------------------DGAYGESKLALDAVVNRWHSESSWAARVSL 592 (866)
T ss_pred EEecCCCCCCccCC------------------------------------CcchhhHHHHHHHHHHHhhccchhhHHHHH
Confidence 5555552 11221 23799999999999998876653 334
Q ss_pred EEeecceecCC
Q 016370 208 TIVRPFNWIGP 218 (390)
Q Consensus 208 ~ilR~~~i~G~ 218 (390)
+-.+.|++-|-
T Consensus 593 ~~A~IGWtrGT 603 (866)
T COG4982 593 AHALIGWTRGT 603 (866)
T ss_pred hhhheeeeccc
Confidence 44455554443
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.031 Score=56.18 Aligned_cols=71 Identities=18% Similarity=0.187 Sum_probs=58.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-ccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI-KMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~-~~~d~Vih~ 96 (390)
.+|+|.| .|-+|+++++.|.++ |++|++++.+++..+.+.+ .+.+.+.||.+|++.++++- +++|+|+-+
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 3689998 899999999999998 9999999999877666543 47899999999999887654 358887755
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 489 ~ 489 (558)
T PRK10669 489 I 489 (558)
T ss_pred c
Confidence 4
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.021 Score=52.48 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=67.5
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccc-ccc--cCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLE-PES--QTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~-~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|.|+|+ |.+|..++..|... +. +|++++++++....... ... .......++.. ..++. .++++|+||.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~-~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~-----t~d~~-~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALK-ELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTG-----TNDYE-DIAGSDVVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhC-CCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEE-----cCCHH-HhCCCCEEEE
Confidence 568998 99999999998887 65 99999998653321110 000 00001112111 11133 4688999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+++.... ...+..+.+..|+.-.+.+++...+.. ..+|.+|
T Consensus 73 t~g~p~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 73 TAGIPRK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred ecCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9986532 233444566778888888888888776 4445554
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.021 Score=54.66 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=34.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
++|+|||||++..+|..+++.|.+. |++|++++..+..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~-G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNA-GHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchH
Confidence 4689999999999999999999999 9999999987644
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.032 Score=49.91 Aligned_cols=106 Identities=17% Similarity=0.145 Sum_probs=69.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-ccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI-KMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~-~~~d~ 92 (390)
+..+.+|+|+||+|-+|+...+-..-+ |++|+++.-.+++...+.+... ....+.+...|+ .+.+.++. +++|+
T Consensus 148 pk~GetvvVSaAaGaVGsvvgQiAKlk-G~rVVGiaGg~eK~~~l~~~lG--fD~~idyk~~d~--~~~L~~a~P~GIDv 222 (340)
T COG2130 148 PKAGETVVVSAAAGAVGSVVGQIAKLK-GCRVVGIAGGAEKCDFLTEELG--FDAGIDYKAEDF--AQALKEACPKGIDV 222 (340)
T ss_pred CCCCCEEEEEecccccchHHHHHHHhh-CCeEEEecCCHHHHHHHHHhcC--CceeeecCcccH--HHHHHHHCCCCeEE
Confidence 456789999999999999998888878 9999999999888776655210 011222222111 12333333 34899
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHh-CC--CcEEEeecccccccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE-NN--KRLIHFSTCEVYGKT 146 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~--~~~v~~Ss~~vy~~~ 146 (390)
.|.+.|-. +++++-. .+ .|++.|+-++-|+..
T Consensus 223 yfeNVGg~----------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 223 YFENVGGE----------------------VLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred EEEcCCch----------------------HHHHHHHhhccccceeeeeehhhcCCC
Confidence 99877621 3333322 12 699999999999875
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.059 Score=51.48 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=70.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccc---c---------------CCCC--CeeEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPES---Q---------------TGAD--RIQFH 73 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~---~---------------~~~~--~i~~~ 73 (390)
++..+|||.| .|-+|+.++..|... |. +++++|...-...++.+... . ..-+ .++.+
T Consensus 40 L~~~~VlviG-~GGlGs~va~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 117 (392)
T PRK07878 40 LKNARVLVIG-AGGLGSPTLLYLAAA-GVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH 117 (392)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence 4567899999 677999999999998 64 68888765322222111000 0 0112 24445
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
...+.. +...++++++|+||.+... ...-..+-++|.+.++.+|+.++...+|.
T Consensus 118 ~~~i~~-~~~~~~~~~~D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~p~v~~~~~g~~G~ 171 (392)
T PRK07878 118 EFRLDP-SNAVELFSQYDLILDGTDN-----------------FATRYLVNDAAVLAGKPYVWGSIYRFEGQ 171 (392)
T ss_pred eccCCh-hHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence 555553 4567788899999987631 11122345788888889999998777775
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.067 Score=44.82 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=65.9
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccc------------------cc-ccCCCCCeeEEeCCCC
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLE------------------PE-SQTGADRIQFHRLNIK 78 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~------------------~~-~~~~~~~i~~~~~D~~ 78 (390)
+|+|.| .|-+|+.+++.|.+. |. ++++++.+.-....+.+ .. .....-+++.+...+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~-Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~ 78 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARS-GVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID 78 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHc-CCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC
Confidence 589999 588999999999998 76 59998886411111110 00 0000123444544554
Q ss_pred ChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-CCcEEEeecccccccc
Q 016370 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-NKRLIHFSTCEVYGKT 146 (390)
Q Consensus 79 d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~v~~Ss~~vy~~~ 146 (390)
. +.+.++++++|+||.+... ...-..+.+.+.+. +..+|+.+...-|+..
T Consensus 79 ~-~~~~~~l~~~DlVi~~~d~-----------------~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~~ 129 (174)
T cd01487 79 E-NNLEGLFGDCDIVVEAFDN-----------------AETKAMLAESLLGNKNKPVVCASGMAGFGDS 129 (174)
T ss_pred h-hhHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHHCCCCEEEEehhhccCCe
Confidence 3 5577888899999988431 11123455666666 6888888765555543
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.046 Score=51.18 Aligned_cols=73 Identities=21% Similarity=0.178 Sum_probs=48.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCC---hhHHHHhh-ccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH---DSRLEGLI-KMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d---~~~~~~~~-~~~d~ 92 (390)
.+|||+||+|-+|..+++.+... |. +|+++++++++...+.+. -++..+ .|..+ .+.+.++. +++|+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~------lGa~~v-i~~~~~~~~~~i~~~~~~gvd~ 227 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLL-GCSRVVGICGSDEKCQLLKSE------LGFDAA-INYKTDNVAERLRELCPEGVDV 227 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHh------cCCcEE-EECCCCCHHHHHHHHCCCCceE
Confidence 79999999999999999888888 88 799998877655543321 022221 12222 22333332 25999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||++.+
T Consensus 228 vid~~g 233 (345)
T cd08293 228 YFDNVG 233 (345)
T ss_pred EEECCC
Confidence 999876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.087 Score=47.24 Aligned_cols=108 Identities=13% Similarity=0.169 Sum_probs=67.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccccc------------------ccCCCCC--eeE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPE------------------SQTGADR--IQF 72 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~------------------~~~~~~~--i~~ 72 (390)
.+...+|+|.| .|-+|+++++.|.+. | .++++++...-...++.+.. ...+-+. +..
T Consensus 27 kL~~s~VlVvG-~GGVGs~vae~Lar~-GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~ 104 (268)
T PRK15116 27 LFADAHICVVG-IGGVGSWAAEALART-GIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTV 104 (268)
T ss_pred HhcCCCEEEEC-cCHHHHHHHHHHHHc-CCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEE
Confidence 45667899998 778999999999998 6 67888887542222211100 0001122 333
Q ss_pred EeCCCCChhHHHHhhc-cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 73 HRLNIKHDSRLEGLIK-MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+. +..+.+.+..++. ++|+||.+... +..-..|.++|++.+..+|.+..++
T Consensus 105 i~-~~i~~e~~~~ll~~~~D~VIdaiD~-----------------~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 105 VD-DFITPDNVAEYMSAGFSYVIDAIDS-----------------VRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred Ee-cccChhhHHHHhcCCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCCEEEECCcc
Confidence 32 2334556666665 59999988742 1223357788999888888765543
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.041 Score=53.71 Aligned_cols=83 Identities=19% Similarity=0.256 Sum_probs=53.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEE----eC-CCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFH----RL-NIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~----~~-D~~d~~~~~~~~~~~ 90 (390)
||+|.|.| .|++|..++..|.+.+ |++|++++.++.....+......-..++.+-+ .+ .+.-..++.++++.+
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a 79 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA 79 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence 58999996 9999999999999872 58899999988877665443211011111111 01 121123345567789
Q ss_pred cEEEEecccc
Q 016370 91 DLTINLAAIC 100 (390)
Q Consensus 91 d~Vih~a~~~ 100 (390)
|++|-|.+..
T Consensus 80 dvi~I~V~TP 89 (473)
T PLN02353 80 DIVFVSVNTP 89 (473)
T ss_pred CEEEEEeCCC
Confidence 9999988654
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.027 Score=51.66 Aligned_cols=65 Identities=20% Similarity=0.327 Sum_probs=48.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|++|.|.| .|.+|..+++.|.+. |++|++++|++.....+... ++. ......++++++|+||-+
T Consensus 1 m~~Ig~IG-lG~mG~~mA~~l~~~-G~~V~v~d~~~~~~~~~~~~-------g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 1 MAAIAFIG-LGQMGSPMASNLLKQ-GHQLQVFDVNPQAVDALVDK-------GAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHc-------CCc-------ccCCHHHHHhcCCEEEEe
Confidence 35899997 999999999999998 99999999988766554331 111 122345667789999977
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 65 v 65 (296)
T PRK15461 65 L 65 (296)
T ss_pred c
Confidence 5
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.035 Score=44.52 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=48.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+++|+|.|.+.-+|..|+..|.++ |.+|..+.++.. ++++.++++|+|
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~-gatV~~~~~~t~----------------------------~l~~~v~~ADIV 75 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRD-GATVYSCDWKTI----------------------------QLQSKVHDADVV 75 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeCCCCc----------------------------CHHHHHhhCCEE
Confidence 578999999999999999999999998 899998875421 366678889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-..+..
T Consensus 76 vsAtg~~ 82 (140)
T cd05212 76 VVGSPKP 82 (140)
T ss_pred EEecCCC
Confidence 9887744
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0066 Score=55.50 Aligned_cols=79 Identities=13% Similarity=0.203 Sum_probs=49.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE----------EeCCCCChhHHHHhh
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF----------HRLNIKHDSRLEGLI 87 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~----------~~~D~~d~~~~~~~~ 87 (390)
++|.|.|+ |.+|..++..|.+. |++|+++++++.......+........+++. ....+.-..++.+++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 79 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVS-GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAV 79 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhh
Confidence 58999995 99999999999998 9999999998766554322100000000000 000111123466777
Q ss_pred ccccEEEEecc
Q 016370 88 KMADLTINLAA 98 (390)
Q Consensus 88 ~~~d~Vih~a~ 98 (390)
+++|+||-+..
T Consensus 80 ~~aD~Vi~avp 90 (288)
T PRK09260 80 ADADLVIEAVP 90 (288)
T ss_pred cCCCEEEEecc
Confidence 88999998864
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.03 Score=51.36 Aligned_cols=66 Identities=14% Similarity=0.310 Sum_probs=48.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
+|+|.|.| .|.+|..+++.|.+. |++|++.+|++.....+.. .++.. .+.+.++++++|+||-+
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~-------~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKA-GYSLVVYDRNPEAVAEVIA-------AGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHH-------CCCee-------cCCHHHHHhcCCEEEEe
Confidence 36899998 799999999999998 9999999998766544332 12211 12355667789999987
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
..
T Consensus 66 vp 67 (296)
T PRK11559 66 LP 67 (296)
T ss_pred CC
Confidence 63
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.031 Score=51.55 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=56.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|+|+|+. -+|...++.+... |.+|++++|++++.+..++. +...+...- |.+.++.+-+.+|+||.
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~l-------GAd~~i~~~-~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKL-------GADHVINSS-DSDALEAVKEIADAIID 235 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHh-------CCcEEEEcC-CchhhHHhHhhCcEEEE
Confidence 46899999977 8999999999988 89999999999888766553 333433323 66666665555999999
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+++
T Consensus 236 tv~ 238 (339)
T COG1064 236 TVG 238 (339)
T ss_pred CCC
Confidence 986
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.023 Score=54.91 Aligned_cols=73 Identities=18% Similarity=0.161 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+++|+|+|+ |-+|..+++.|... |. +|++++|+......+.... +. +..+.+++.+.+.++|+|
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~------g~-----~~~~~~~~~~~l~~aDvV 246 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEF------GG-----EAIPLDELPEALAEADIV 246 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHc------CC-----cEeeHHHHHHHhccCCEE
Confidence 56789999985 99999999999988 76 7999999876554333210 11 222335667777889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.+.+..
T Consensus 247 I~aT~s~ 253 (423)
T PRK00045 247 ISSTGAP 253 (423)
T ss_pred EECCCCC
Confidence 9987644
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.018 Score=48.90 Aligned_cols=67 Identities=19% Similarity=0.179 Sum_probs=43.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
||++. .||+|.||..|++.|.+. ||+|.+-.|+.++ .....+.. ... + .......+.+.+|+||-
T Consensus 1 m~~~~-i~GtGniG~alA~~~a~a-g~eV~igs~r~~~~~~a~a~~l----~~~-------i-~~~~~~dA~~~aDVVvL 66 (211)
T COG2085 1 MMIIA-IIGTGNIGSALALRLAKA-GHEVIIGSSRGPKALAAAAAAL----GPL-------I-TGGSNEDAAALADVVVL 66 (211)
T ss_pred CcEEE-EeccChHHHHHHHHHHhC-CCeEEEecCCChhHHHHHHHhh----ccc-------c-ccCChHHHHhcCCEEEE
Confidence 34555 455999999999999999 9999998666543 33322211 011 1 12235666777999996
Q ss_pred ec
Q 016370 96 LA 97 (390)
Q Consensus 96 ~a 97 (390)
..
T Consensus 67 AV 68 (211)
T COG2085 67 AV 68 (211)
T ss_pred ec
Confidence 54
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.091 Score=46.20 Aligned_cols=109 Identities=16% Similarity=0.151 Sum_probs=69.7
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccccc--------------------ccCCCCCeeEEeCCC
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPE--------------------SQTGADRIQFHRLNI 77 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~i~~~~~D~ 77 (390)
+|||.| .|-+|..+++.|... | -++.++|.+.-....+.+.. .....-.++.+..++
T Consensus 1 kVlvvG-~GGlG~eilk~La~~-Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i 78 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALM-GFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKV 78 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 588998 788999999999998 6 46888877532222211100 000012355666777
Q ss_pred CChhHH-HHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 78 KHDSRL-EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 78 ~d~~~~-~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
.+.+.+ ...++++|+||.+.. |+..-..+-+.|.+.++.+|..++.+.+|..
T Consensus 79 ~~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~iplI~~g~~G~~G~v 131 (234)
T cd01484 79 GPEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIVPLIESGTEGFKGNA 131 (234)
T ss_pred ChhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcccCCceEE
Confidence 554333 456788999998753 2333444567888888899998887766654
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.026 Score=50.99 Aligned_cols=75 Identities=19% Similarity=0.168 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.++++++|+|+ |-+|+.++..|.+. |++|++++|+..+.+.+.+.... ...+... +..+ ..+.++|+||
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~--~~~~~~~--~~~~-----~~~~~~DivI 183 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQR--YGEIQAF--SMDE-----LPLHRVDLII 183 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhh--cCceEEe--chhh-----hcccCccEEE
Confidence 35689999998 78999999999998 89999999987665544332110 0111221 1111 1234699999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
++....
T Consensus 184 natp~g 189 (270)
T TIGR00507 184 NATSAG 189 (270)
T ss_pred ECCCCC
Confidence 998754
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.016 Score=52.74 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.++++|+|.|+ |.+|++++..|.+. |. +|++++|+..+.+.+.+...... ..+.+.. .+++.+.+.++|+|
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~-~~~~~~~-----~~~~~~~~~~aDiV 196 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARF-PAARATA-----GSDLAAALAAADGL 196 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhC-CCeEEEe-----ccchHhhhCCCCEE
Confidence 46689999996 55999999999998 76 79999998766655433211100 1122221 12344566789999
Q ss_pred EEec
Q 016370 94 INLA 97 (390)
Q Consensus 94 ih~a 97 (390)
|++.
T Consensus 197 InaT 200 (284)
T PRK12549 197 VHAT 200 (284)
T ss_pred EECC
Confidence 9995
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.02 Score=52.12 Aligned_cols=95 Identities=8% Similarity=-0.019 Sum_probs=57.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe---EEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK---ILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~---V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
..++|.| ||||-+|+.+++.|.++ ++. ++++... .+..+.+. ..+-++..-++.+. .++++|
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer-~fpv~~l~l~~s~~~s~gk~i~-------f~g~~~~V~~l~~~-----~f~~vD 67 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQS-DLEIEQISIVEIEPFGEEQGIR-------FNNKAVEQIAPEEV-----EWADFN 67 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhc-CCchhheeecccccccCCCEEE-------ECCEEEEEEECCcc-----CcccCC
Confidence 3468999 99999999999999887 664 3444332 11111110 01223333334433 256799
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccc
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy 143 (390)
++|. ++.. .++.....+.+.|..+|=-||+.-+
T Consensus 68 ia~f-ag~~------------------~s~~~ap~a~~aG~~VIDnSsa~Rm 100 (322)
T PRK06901 68 YVFF-AGKM------------------AQAEHLAQAAEAGCIVIDLYGICAA 100 (322)
T ss_pred EEEE-cCHH------------------HHHHHHHHHHHCCCEEEECChHhhC
Confidence 9998 6521 1455666777778777777776543
|
|
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.59 Score=42.52 Aligned_cols=85 Identities=9% Similarity=0.083 Sum_probs=55.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEE-EEecC--ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--cc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKIL-ALDVY--NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--AD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~-~~~r~--~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d 91 (390)
..||+|-|.||-+|+.+.+.|++- |++++ .+..+ .... .++ .-...+.++... +|
T Consensus 8 ~~~~~v~~~~~~~g~~~l~~l~~~-g~~~v~pVnp~~~~~~v------------~G~-------~~y~sv~dlp~~~~~D 67 (291)
T PRK05678 8 DTKVIVQGITGKQGTFHTEQMLAY-GTNIVGGVTPGKGGTTV------------LGL-------PVFNTVAEAVEATGAN 67 (291)
T ss_pred CCeEEEeCCCchHHHHHHHHHHHC-CCCEEEEECCCCCCCeE------------eCe-------eccCCHHHHhhccCCC
Confidence 358999999999999999999986 77533 44433 1111 122 223346666665 88
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
.+|-+.. -..+..+++.|.+.| +.+|.+|+
T Consensus 68 lAvi~vp------------------~~~v~~~l~e~~~~gvk~avI~s~ 98 (291)
T PRK05678 68 ASVIYVP------------------PPFAADAILEAIDAGIDLIVCITE 98 (291)
T ss_pred EEEEEcC------------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence 8887653 122556777788888 77777776
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.056 Score=49.87 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=51.9
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
..+.+++|.|.| .|-||+.+++.|..- |++|+++++...... ++..+ ...+++.++++++|+
T Consensus 132 ~~l~g~tvgIvG-~G~IG~~vA~~l~af-G~~V~~~~~~~~~~~------------~~~~~----~~~~~l~e~l~~aDv 193 (312)
T PRK15469 132 YHREDFTIGILG-AGVLGSKVAQSLQTW-GFPLRCWSRSRKSWP------------GVQSF----AGREELSAFLSQTRV 193 (312)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCCCCCC------------Cceee----cccccHHHHHhcCCE
Confidence 456789999999 999999999999987 999999988543211 11111 134578999999999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
|+.+.-
T Consensus 194 vv~~lP 199 (312)
T PRK15469 194 LINLLP 199 (312)
T ss_pred EEECCC
Confidence 998864
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.027 Score=54.28 Aligned_cols=74 Identities=22% Similarity=0.235 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+.+++|+|+|+ |-+|..+++.|... | .+|++++|+......+.... +...+ +.+++.+++.++|+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~------g~~~i-----~~~~l~~~l~~aDv 243 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKEL------GGEAV-----KFEDLEEYLAEADI 243 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHc------CCeEe-----eHHHHHHHHhhCCE
Confidence 356789999996 99999999999998 7 78999999876544332210 11111 23467778889999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||.+.+..
T Consensus 244 Vi~aT~s~ 251 (417)
T TIGR01035 244 VISSTGAP 251 (417)
T ss_pred EEECCCCC
Confidence 99987643
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.15 Score=38.63 Aligned_cols=89 Identities=16% Similarity=0.151 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+++++|||+|| |-+|..=++.|++. |.+|++++......+ ..+++..-++ ++.+.+++.||
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~-gA~v~vis~~~~~~~-----------~~i~~~~~~~------~~~l~~~~lV~ 65 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEA-GAKVTVISPEIEFSE-----------GLIQLIRREF------EEDLDGADLVF 65 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCC-TBEEEEEESSEHHHH-----------TSCEEEESS-------GGGCTTESEEE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEECCchhhhh-----------hHHHHHhhhH------HHHHhhheEEE
Confidence 57889999996 99999999999998 899999998751111 2444544333 23367788888
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
-+.+ ++ .-...+.+.|++.+ .+++++..
T Consensus 66 ~at~---------d~--------~~n~~i~~~a~~~~-i~vn~~D~ 93 (103)
T PF13241_consen 66 AATD---------DP--------ELNEAIYADARARG-ILVNVVDD 93 (103)
T ss_dssp E-SS----------H--------HHHHHHHHHHHHTT-SEEEETT-
T ss_pred ecCC---------CH--------HHHHHHHHHHhhCC-EEEEECCC
Confidence 4332 11 11345777887774 56666553
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.023 Score=55.99 Aligned_cols=76 Identities=16% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+++|+|.|+ |-+|..+++.|... |. +|+++.|+......+.... .++... +...+++..++.++|+|
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~-----~g~~i~---~~~~~dl~~al~~aDVV 333 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEF-----PDVEII---YKPLDEMLACAAEADVV 333 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHh-----CCCceE---eecHhhHHHHHhcCCEE
Confidence 56789999997 99999999999998 75 6999999877665544321 111111 12234566778889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.+.+..
T Consensus 334 IsAT~s~ 340 (519)
T PLN00203 334 FTSTSSE 340 (519)
T ss_pred EEccCCC
Confidence 9876543
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.052 Score=44.64 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=49.1
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
||.|.| +|-.|.+++..|.++ |++|.+..|++.....+..... ....+++..-. .+.-..+++++++++|+||-+.
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~-g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADN-GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHC-TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S
T ss_pred CEEEEC-cCHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEecc
Confidence 688999 799999999999999 9999999998765544432111 11112222211 1222346788889999999654
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.021 Score=51.94 Aligned_cols=65 Identities=22% Similarity=0.321 Sum_probs=45.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|.|.| .|.+|..++..|.+. |++|+++++++......... +. .+... ... +.+.++|+||-+.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~-------g~----~~~~~-~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIER-------GL----VDEAS-TDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC-------CC----ccccc-CCH-hHhcCCCEEEEcC
Confidence 5799998 899999999999998 99999999987665544321 11 01111 112 2457899999876
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.06 Score=46.29 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=46.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+++|||.|| |-+|...++.|++. |++|+++.+.... ...+.. ...+.+..-.+. ...+.++|+|
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~------~~~i~~~~~~~~-----~~~l~~adlV 74 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKY-GAHIVVISPELTENLVKLVE------EGKIRWKQKEFE-----PSDIVDAFLV 74 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHh------CCCEEEEecCCC-----hhhcCCceEE
Confidence 57899999996 99999999999998 8999999865322 122211 123555443333 2235678888
Q ss_pred EEec
Q 016370 94 INLA 97 (390)
Q Consensus 94 ih~a 97 (390)
|-+.
T Consensus 75 iaaT 78 (202)
T PRK06718 75 IAAT 78 (202)
T ss_pred EEcC
Confidence 8553
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.064 Score=45.21 Aligned_cols=78 Identities=12% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~~~~d~ 92 (390)
++.+|+|+|.|.|..+|.-|+..|+++ |.+|++++.+....... ......-.....| ...+.+.++++|+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~-~AtVti~~~~~~~~~~~--------~~~~~hs~t~~~~~~~~l~~~~~~ADI 129 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLAND-GARVYSVDINGIQVFTR--------GESIRHEKHHVTDEEAMTLDCLSQSDV 129 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEecCccccccc--------ccccccccccccchhhHHHHHhhhCCE
Confidence 578999999999999999999999998 99999986543211100 0000011111112 2247788899999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||-+.|..
T Consensus 130 VIsAvG~~ 137 (197)
T cd01079 130 VITGVPSP 137 (197)
T ss_pred EEEccCCC
Confidence 99888754
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.047 Score=50.42 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=49.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc----cCCCCCe--eEEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES----QTGADRI--QFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~i--~~~~~D~~d~~~~~~~~~~~ 90 (390)
.++|.|.| +|.+|+.++..|+.. |++|+++++++........... .....+. .-....+.-..++++++.++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~a-G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAH-GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 36899998 699999999999998 9999999998754332111000 0000000 00001112223467788899
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|.||-++-
T Consensus 85 DlViEavp 92 (321)
T PRK07066 85 DFIQESAP 92 (321)
T ss_pred CEEEECCc
Confidence 99998763
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.1 Score=48.50 Aligned_cols=97 Identities=16% Similarity=0.177 Sum_probs=61.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH---HHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR---LEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~---~~~~~~--~~ 90 (390)
.+.+|+|+|++|-+|..+++.+... |++|+++++++.....+... +... ..|..+.+. +..... ++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKEL-------GADY-VIDYRKEDFVREVRELTGKRGV 236 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-------CCCe-EEecCChHHHHHHHHHhCCCCC
Confidence 4578999999999999999999998 99999998877654433221 1111 124444333 333322 48
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
|.+|++++.. .....++..+.. .+++.+|+.
T Consensus 237 d~~i~~~g~~------------------~~~~~~~~l~~~-G~~v~~~~~ 267 (342)
T cd08266 237 DVVVEHVGAA------------------TWEKSLKSLARG-GRLVTCGAT 267 (342)
T ss_pred cEEEECCcHH------------------HHHHHHHHhhcC-CEEEEEecC
Confidence 9999998621 012234444444 578888764
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.062 Score=54.59 Aligned_cols=71 Identities=21% Similarity=0.178 Sum_probs=59.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
++|+|.| .|-+|+.+++.|.++ |+++++++.+++..+.+.+ .+..++.||.++++-++++ +.+++.||-+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 401 PRVIIAG-FGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred CcEEEEe-cChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHh-------cCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 5799998 899999999999998 9999999999887766644 4788999999999988764 3458988866
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 472 ~ 472 (621)
T PRK03562 472 I 472 (621)
T ss_pred e
Confidence 4
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.044 Score=49.94 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCCh---hhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYND---KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~---~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+.+++++|.|+.|- +++++..|... | .+|+++.|+.. +.+.+.+.........+.+ .++.+.+.+...+.++
T Consensus 122 ~~~k~vlvlGaGGa-arAi~~~l~~~-g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~a 197 (288)
T PRK12749 122 IKGKTMVLLGAGGA-STAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASA 197 (288)
T ss_pred cCCCEEEEECCcHH-HHHHHHHHHHC-CCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccC
Confidence 46789999998666 89999999988 6 47999999853 3333322111100011222 2233333355566789
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+|||+...
T Consensus 198 DivINaTp~ 206 (288)
T PRK12749 198 DILTNGTKV 206 (288)
T ss_pred CEEEECCCC
Confidence 999997643
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.17 Score=37.82 Aligned_cols=85 Identities=18% Similarity=0.089 Sum_probs=59.8
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEecc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAA 98 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a~ 98 (390)
+|||.||-.-.-..+-+.+.+. |++.....|.. ++-.....+...++++|+||-+..
T Consensus 1 ~vliVGG~~~~~~~~~~~~~~~-G~~~~~hg~~~----------------------~~~~~~~~l~~~i~~aD~VIv~t~ 57 (97)
T PF10087_consen 1 SVLIVGGREDRERRYKRILEKY-GGKLIHHGRDG----------------------GDEKKASRLPSKIKKADLVIVFTD 57 (97)
T ss_pred CEEEEcCCcccHHHHHHHHHHc-CCEEEEEecCC----------------------CCccchhHHHHhcCCCCEEEEEeC
Confidence 4899999666667777777777 77766663321 111223458888899999999987
Q ss_pred ccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 99 ICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 99 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
..++. .+..+-+.|++.+++++|+.+.+
T Consensus 58 ~vsH~---------------~~~~vk~~akk~~ip~~~~~~~~ 85 (97)
T PF10087_consen 58 YVSHN---------------AMWKVKKAAKKYGIPIIYSRSRG 85 (97)
T ss_pred CcChH---------------HHHHHHHHHHHcCCcEEEECCCC
Confidence 76532 15567788999999999998643
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.063 Score=43.92 Aligned_cols=69 Identities=13% Similarity=0.168 Sum_probs=46.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+|+++|+| -|.+|+.+++.|... |.+|++...+|-..-... .+++++. .+++++..+|++|
T Consensus 21 l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~-------~dGf~v~--------~~~~a~~~adi~v 83 (162)
T PF00670_consen 21 LAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAA-------MDGFEVM--------TLEEALRDADIFV 83 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHH-------HTT-EEE---------HHHHTTT-SEEE
T ss_pred eCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhh-------hcCcEec--------CHHHHHhhCCEEE
Confidence 5789999999 999999999999999 999999999773322111 2355544 3777888999999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
-+.|..
T Consensus 84 taTG~~ 89 (162)
T PF00670_consen 84 TATGNK 89 (162)
T ss_dssp E-SSSS
T ss_pred ECCCCc
Confidence 887754
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.1 Score=44.75 Aligned_cols=67 Identities=24% Similarity=0.335 Sum_probs=44.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhC-CCe-EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLET-PHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|+|.|.| .|.||..+++.+...+ .++ +.+.+|+.++...+... ...+...++.+++.++|.|+-
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~-------------~~~~~~s~ide~~~~~DlvVE 66 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEAS-------------VGRRCVSDIDELIAEVDLVVE 66 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhh-------------cCCCccccHHHHhhccceeee
Confidence 5788888 8999999999988631 255 66778887766654432 111112345555567888888
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+|+
T Consensus 67 aAS 69 (255)
T COG1712 67 AAS 69 (255)
T ss_pred eCC
Confidence 876
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.035 Score=53.25 Aligned_cols=76 Identities=22% Similarity=0.259 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+.+++|||.|+ |-+|+.++..|... | .+++++.|+......+.... .. +.....+++...+.++|+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~-----~~-----~~~~~~~~l~~~l~~aDi 245 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAF-----RN-----ASAHYLSELPQLIKKADI 245 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHh-----cC-----CeEecHHHHHHHhccCCE
Confidence 356789999996 99999999999998 6 57999999876655443321 11 122234567888889999
Q ss_pred EEEeccccC
Q 016370 93 TINLAAICT 101 (390)
Q Consensus 93 Vih~a~~~~ 101 (390)
||++.+...
T Consensus 246 VI~aT~a~~ 254 (414)
T PRK13940 246 IIAAVNVLE 254 (414)
T ss_pred EEECcCCCC
Confidence 999987543
|
|
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.13 Score=46.08 Aligned_cols=107 Identities=18% Similarity=0.116 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+-++.+|+|.||+|-+|+-+-+-..-. |+.|++..-+.++...++.... ... ..|.-++.++.++++
T Consensus 151 pk~geTv~VSaAsGAvGql~GQ~Ak~~-Gc~VVGsaGS~EKv~ll~~~~G--~d~-----afNYK~e~~~~~aL~r~~P~ 222 (343)
T KOG1196|consen 151 PKKGETVFVSAASGAVGQLVGQFAKLM-GCYVVGSAGSKEKVDLLKTKFG--FDD-----AFNYKEESDLSAALKRCFPE 222 (343)
T ss_pred CCCCCEEEEeeccchhHHHHHHHHHhc-CCEEEEecCChhhhhhhHhccC--Ccc-----ceeccCccCHHHHHHHhCCC
Confidence 446789999999999999888777777 9999999888877665554210 001 123333434444444
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTI 147 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~ 147 (390)
++|+-|...|-. + ...++..++.+ .|++.|+-.+.|....
T Consensus 223 GIDiYfeNVGG~----------------~--lDavl~nM~~~-gri~~CG~ISqYN~~~ 262 (343)
T KOG1196|consen 223 GIDIYFENVGGK----------------M--LDAVLLNMNLH-GRIAVCGMISQYNLEN 262 (343)
T ss_pred cceEEEeccCcH----------------H--HHHHHHhhhhc-cceEeeeeehhccccC
Confidence 378888766521 0 22344444455 5999999999987653
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.046 Score=50.00 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=53.4
Q ss_pred CCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 9 DLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 9 ~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
+.+...+++++|.|.| .|-+|+.+++.|... |++|++.+|.......... .++++ ..+.++++
T Consensus 8 d~~~~~LkgKtVGIIG-~GsIG~amA~nL~d~-G~~ViV~~r~~~s~~~A~~-------~G~~v--------~sl~Eaak 70 (335)
T PRK13403 8 DANVELLQGKTVAVIG-YGSQGHAQAQNLRDS-GVEVVVGVRPGKSFEVAKA-------DGFEV--------MSVSEAVR 70 (335)
T ss_pred cCChhhhCcCEEEEEe-EcHHHHHHHHHHHHC-cCEEEEEECcchhhHHHHH-------cCCEE--------CCHHHHHh
Confidence 3455678999999999 799999999999987 9999998775332221111 13322 14788889
Q ss_pred cccEEEEecc
Q 016370 89 MADLTINLAA 98 (390)
Q Consensus 89 ~~d~Vih~a~ 98 (390)
.+|+|+.+.-
T Consensus 71 ~ADVV~llLP 80 (335)
T PRK13403 71 TAQVVQMLLP 80 (335)
T ss_pred cCCEEEEeCC
Confidence 9999998863
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.11 Score=47.75 Aligned_cols=108 Identities=17% Similarity=0.136 Sum_probs=69.5
Q ss_pred EEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-ccccccC--CCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 22 MIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPESQT--GADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 22 ItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~~~--~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|.| .|.||++++..|...+- .++.+++......... .+..... ....+.+..+ + .+.++++|+||-+|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivVita 72 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVVITA 72 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEEECC
Confidence 346 59999999999988722 3699999866432211 1110000 0112223211 2 34678899999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
|.... ...+....+..|+.-.+.+.+...+++ ..+|.+|-
T Consensus 73 g~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 73 GAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 97542 234566788899999999999988887 56666664
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.044 Score=49.36 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=48.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+++|+|+|.+..+|.-|+..|+++ +.+|+++.++. .++.+.++++|+|
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~T----------------------------~~l~~~~~~ADIv 206 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRFT----------------------------KNLRHHVRNADLL 206 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECCC----------------------------CCHHHHHhhCCEE
Confidence 467899999999999999999999998 89999987532 1377777889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.++|..
T Consensus 207 i~avG~p 213 (285)
T PRK10792 207 VVAVGKP 213 (285)
T ss_pred EEcCCCc
Confidence 9988754
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.041 Score=50.18 Aligned_cols=39 Identities=15% Similarity=0.266 Sum_probs=34.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH 57 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~ 57 (390)
+++|.|.|+ |.+|..++..|+.. |++|+++++.++....
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~-G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARA-GVDVLVFETTEELATA 43 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhC-CCEEEEEECCHHHHHH
Confidence 358999985 99999999999998 9999999999876544
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.054 Score=51.92 Aligned_cols=70 Identities=16% Similarity=0.297 Sum_probs=53.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vi 94 (390)
.|+|+|+|+ |..|..++..+.+. |++|++++..+....... .+ .++..|..|.+.+.++++ ++|+|+
T Consensus 12 ~~~ilIiG~-g~~~~~~~~a~~~~-G~~v~~~~~~~~~~~~~~-------ad--~~~~~~~~d~~~l~~~~~~~~id~vi 80 (395)
T PRK09288 12 ATRVMLLGS-GELGKEVAIEAQRL-GVEVIAVDRYANAPAMQV-------AH--RSHVIDMLDGDALRAVIEREKPDYIV 80 (395)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCCCCchHHh-------hh--heEECCCCCHHHHHHHHHHhCCCEEE
Confidence 468999984 78999999999888 999999998764322110 01 256778889899988888 699998
Q ss_pred Eec
Q 016370 95 NLA 97 (390)
Q Consensus 95 h~a 97 (390)
-..
T Consensus 81 ~~~ 83 (395)
T PRK09288 81 PEI 83 (395)
T ss_pred Eee
Confidence 654
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.22 Score=42.79 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecC---Chhhhccccccc--------------cC--CCCCeeEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVY---NDKIKHLLEPES--------------QT--GADRIQFH 73 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~---~~~~~~~~~~~~--------------~~--~~~~i~~~ 73 (390)
.+..++|+|.|+ |-+|+.++..|.+. |+ +++++|++ .+.+.+...... .. ..-.++.+
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~-Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~ 95 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARA-GIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY 95 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHc-CCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 355678999996 66999999999998 87 69999887 333222100000 00 01234455
Q ss_pred eCCCCChhHHHHhhccccEEEEec
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
..+++ .+.+.+++.++|+||.+.
T Consensus 96 ~~~i~-~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 96 DEKIT-EENIDKFFKDADIVCEAF 118 (200)
T ss_pred eeeCC-HhHHHHHhcCCCEEEECC
Confidence 55554 456778888999999873
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.047 Score=52.25 Aligned_cols=67 Identities=12% Similarity=0.154 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+++|+|+| .|.||+.+++.|... |.+|+++++++........ .++++. .+.++++++|+||
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~-------~G~~v~--------~l~eal~~aDVVI 272 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAM-------DGFRVM--------TMEEAAELGDIFV 272 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHh-------cCCEec--------CHHHHHhCCCEEE
Confidence 5789999999 589999999999998 8999999987754322111 133221 2456677899999
Q ss_pred Eecc
Q 016370 95 NLAA 98 (390)
Q Consensus 95 h~a~ 98 (390)
.+.+
T Consensus 273 ~aTG 276 (425)
T PRK05476 273 TATG 276 (425)
T ss_pred ECCC
Confidence 8764
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.12 Score=47.84 Aligned_cols=99 Identities=14% Similarity=0.026 Sum_probs=60.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCee-EEeCCCCC-hhHHHHhh-ccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ-FHRLNIKH-DSRLEGLI-KMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~-~~~~D~~d-~~~~~~~~-~~~d~ 92 (390)
.+.+|+|.|++|-+|..+++.+... |.+|+++.+++.....+... ++. ++..+-.+ .+.+.... +++|.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~~~~~~vd~ 210 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSL-------GCDRPINYKTEDLGEVLKKEYPKGVDV 210 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHc-------CCceEEeCCCccHHHHHHHhcCCCCeE
Confidence 4678999999999999999988888 89999998876655444221 121 22211111 12222222 24899
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
||++.+.. .....++.++.. .++|.+++..
T Consensus 211 v~~~~g~~------------------~~~~~~~~l~~~-g~~v~~g~~~ 240 (329)
T cd08250 211 VYESVGGE------------------MFDTCVDNLALK-GRLIVIGFIS 240 (329)
T ss_pred EEECCcHH------------------HHHHHHHHhccC-CeEEEEeccc
Confidence 99987521 123344444444 5888887754
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.057 Score=49.08 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHh--hccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGL--IKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~--~~~~ 90 (390)
|+.++|.|.| +|.||+.++..+++.++.++.++. ++++... ...+. -++.... .+.+.+-+. +.++
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~------~Gi~~~~---~~ie~LL~~~~~~dI 71 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARR------LGVATSA---EGIDGLLAMPEFDDI 71 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHH------cCCCccc---CCHHHHHhCcCCCCC
Confidence 3457899999 999999999999886578877654 4432111 11110 1222211 233333321 2468
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
|+||.+.+.. ........+.+.|+++|-.|++.
T Consensus 72 DiVf~AT~a~------------------~H~e~a~~a~eaGk~VID~sPA~ 104 (302)
T PRK08300 72 DIVFDATSAG------------------AHVRHAAKLREAGIRAIDLTPAA 104 (302)
T ss_pred CEEEECCCHH------------------HHHHHHHHHHHcCCeEEECCccc
Confidence 9999987522 13345566778888888888876
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.042 Score=49.48 Aligned_cols=58 Identities=12% Similarity=0.192 Sum_probs=47.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|.|.|.||.+|..++..|+++ |++|++..... ..+.+..+++|+|
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~-gatVtv~~s~t----------------------------~~l~~~~~~ADIV 205 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDK-NATVTLTHSRT----------------------------RNLAEVARKADIL 205 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHC-CCEEEEECCCC----------------------------CCHHHHHhhCCEE
Confidence 478999999999999999999999998 99999872111 1366777889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-+.|..
T Consensus 206 I~avg~~ 212 (284)
T PRK14179 206 VVAIGRG 212 (284)
T ss_pred EEecCcc
Confidence 9988754
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.05 Score=50.63 Aligned_cols=67 Identities=25% Similarity=0.296 Sum_probs=50.5
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
...+.+|+|.|.| .|.||+.+++.|... |++|++.++.+..... .+ .-..++.++++++|
T Consensus 141 ~~~l~g~~VgIIG-~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~-----------~~-------~~~~~l~ell~~aD 200 (330)
T PRK12480 141 SKPVKNMTVAIIG-TGRIGAATAKIYAGF-GATITAYDAYPNKDLD-----------FL-------TYKDSVKEAIKDAD 200 (330)
T ss_pred ccccCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCChhHhhh-----------hh-------hccCCHHHHHhcCC
Confidence 3567889999998 799999999999987 9999999987643110 00 01235788889999
Q ss_pred EEEEecc
Q 016370 92 LTINLAA 98 (390)
Q Consensus 92 ~Vih~a~ 98 (390)
+|+-+.-
T Consensus 201 iVil~lP 207 (330)
T PRK12480 201 IISLHVP 207 (330)
T ss_pred EEEEeCC
Confidence 9887653
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.046 Score=49.26 Aligned_cols=57 Identities=14% Similarity=0.266 Sum_probs=47.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+++|+|.|.++.+|+.|+..|+++ |.+|+++.... .++.+.++++|+|
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs~t----------------------------~~l~~~~~~ADIV 205 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHSKT----------------------------RDLAAHTRQADIV 205 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecCCC----------------------------CCHHHHhhhCCEE
Confidence 468899999999999999999999998 89998865321 2366778889999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|-++|.
T Consensus 206 V~avG~ 211 (285)
T PRK14189 206 VAAVGK 211 (285)
T ss_pred EEcCCC
Confidence 988874
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.058 Score=44.34 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALD 49 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~ 49 (390)
.+.+++|+|.| .|-+|...++.|++. |++|++++
T Consensus 10 ~l~~~~vlVvG-GG~va~rka~~Ll~~-ga~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIG-GGKIAYRKASGLKDT-GAFVTVVS 43 (157)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEc
Confidence 36789999999 799999999999998 99999985
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.12 Score=47.79 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=49.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC--hhHHHHhh-ccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH--DSRLEGLI-KMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d--~~~~~~~~-~~~d~V 93 (390)
+.+|||.|++|.+|..+++.+... |.+|+++++.+...+.+... ++..+ .|..+ .+.+..+- .++|+|
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~-------g~~~v-~~~~~~~~~~~~~~~~~~~d~v 217 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKL-------GAKEV-IPREELQEESIKPLEKQRWAGA 217 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHc-------CCCEE-EcchhHHHHHHHhhccCCcCEE
Confidence 468999999999999999999888 89999998887765554331 22221 11121 23333332 238999
Q ss_pred EEecc
Q 016370 94 INLAA 98 (390)
Q Consensus 94 ih~a~ 98 (390)
|++.+
T Consensus 218 ld~~g 222 (326)
T cd08289 218 VDPVG 222 (326)
T ss_pred EECCc
Confidence 99875
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.063 Score=48.36 Aligned_cols=58 Identities=19% Similarity=0.190 Sum_probs=47.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+++|+|.|.+..+|..++..|+++ |.+|+++.... .++.+.++++|+|
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~t----------------------------~~l~~~~~~ADIv 204 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHILT----------------------------KDLSFYTQNADIV 204 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCCc----------------------------HHHHHHHHhCCEE
Confidence 568999999999999999999999998 89998874321 2366778889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-+.|..
T Consensus 205 V~AvG~p 211 (285)
T PRK14191 205 CVGVGKP 211 (285)
T ss_pred EEecCCC
Confidence 9888754
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.04 Score=41.00 Aligned_cols=65 Identities=23% Similarity=0.284 Sum_probs=46.4
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC---CeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP---HKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
||.|. |+|.+|++|++.|++. | ++|+.+ +|+++....+.+. -++.+.. .+..++++.+|+||
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~-g~~~~~v~~~~~r~~~~~~~~~~~------~~~~~~~------~~~~~~~~~advvi 66 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLAS-GIKPHEVIIVSSRSPEKAAELAKE------YGVQATA------DDNEEAAQEADVVI 66 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHT-TS-GGEEEEEEESSHHHHHHHHHH------CTTEEES------EEHHHHHHHTSEEE
T ss_pred CEEEE-CCCHHHHHHHHHHHHC-CCCceeEEeeccCcHHHHHHHHHh------hcccccc------CChHHhhccCCEEE
Confidence 57788 5999999999999998 8 899965 8888776665432 1222221 13566667899999
Q ss_pred Eec
Q 016370 95 NLA 97 (390)
Q Consensus 95 h~a 97 (390)
-+.
T Consensus 67 lav 69 (96)
T PF03807_consen 67 LAV 69 (96)
T ss_dssp E-S
T ss_pred EEE
Confidence 876
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.16 Score=48.38 Aligned_cols=112 Identities=16% Similarity=0.114 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccccc--------------------ccCCCCCeeE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPE--------------------SQTGADRIQF 72 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~i~~ 72 (390)
+++..+|+|.| .|-+|+.+++.|... | -+++++|...-...++.+.. .....-.++.
T Consensus 35 ~L~~~~VlivG-~GGlG~~va~~La~~-Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~ 112 (390)
T PRK07411 35 RLKAASVLCIG-TGGLGSPLLLYLAAA-GIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL 112 (390)
T ss_pred HHhcCcEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence 45667899999 667999999999998 6 45777776532222221100 0001123555
Q ss_pred EeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
+...++. +...+++.++|+||.+... ...-..+-++|.+.++.+|+.+....||.
T Consensus 113 ~~~~~~~-~~~~~~~~~~D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~p~v~~~~~g~~g~ 167 (390)
T PRK07411 113 YETRLSS-ENALDILAPYDVVVDGTDN-----------------FPTRYLVNDACVLLNKPNVYGSIFRFEGQ 167 (390)
T ss_pred EecccCH-HhHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHcCCCEEEEEEccCEEE
Confidence 5555554 3466778899999988642 11122244678888899999988776665
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.045 Score=51.86 Aligned_cols=70 Identities=14% Similarity=0.135 Sum_probs=51.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
..+.+|+|.|.| .|-||+.+++.|..- |.+|++.+|.......... .+ +.-...++++++++|+
T Consensus 188 ~~L~gktVGIvG-~G~IG~~vA~~l~~f-G~~V~~~dr~~~~~~~~~~-------~g-------~~~~~~l~ell~~aDv 251 (385)
T PRK07574 188 YDLEGMTVGIVG-AGRIGLAVLRRLKPF-DVKLHYTDRHRLPEEVEQE-------LG-------LTYHVSFDSLVSVCDV 251 (385)
T ss_pred eecCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCCchhhHhh-------cC-------ceecCCHHHHhhcCCE
Confidence 457889999999 699999999999987 9999999987522111100 11 1112358888999999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
|+.+.-
T Consensus 252 V~l~lP 257 (385)
T PRK07574 252 VTIHCP 257 (385)
T ss_pred EEEcCC
Confidence 988764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 390 | ||||
| 3slg_A | 372 | Crystal Structure Of Pbgp3 Protein From Burkholderi | 8e-58 | ||
| 1z7e_A | 660 | Crystal Structure Of Full Length Arna Length = 660 | 2e-55 | ||
| 1z73_A | 358 | Crystal Structure Of E. Coli Arna Dehydrogenase (de | 2e-55 | ||
| 2bll_A | 345 | Apo-Structure Of The C-Terminal Decarboxylase Domai | 3e-55 | ||
| 1u9j_A | 358 | Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl | 3e-55 | ||
| 1z7b_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 2e-54 | ||
| 1z75_A | 358 | Crystal Structure Of Arna Dehydrogenase (decarboxyl | 2e-54 | ||
| 1z74_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 2e-54 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 3e-24 | ||
| 2b69_A | 343 | Crystal Structure Of Human Udp-Glucoronic Acid Deca | 2e-21 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 2e-08 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 5e-08 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 1e-07 | ||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 3e-07 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 2e-06 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 2e-06 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 2e-06 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-06 | ||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 3e-06 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 4e-06 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 6e-06 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 6e-06 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 6e-06 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-06 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 7e-06 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 8e-06 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 8e-06 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 9e-06 | ||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 9e-06 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 9e-06 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-05 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-05 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-05 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-05 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-05 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 3e-05 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 4e-05 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 5e-05 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 7e-05 | ||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 8e-05 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 2e-04 | ||
| 2pzj_A | 377 | Crystal Structure Of The Bordetella Bronchiseptica | 2e-04 | ||
| 1bxk_A | 355 | Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = | 3e-04 | ||
| 2q1w_A | 333 | Crystal Structure Of The Bordetella Bronchiseptica | 3e-04 | ||
| 3sxp_A | 362 | Crystal Structure Of Helicobacter Pylori Adp-L-Glyc | 3e-04 |
| >pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372 | Back alignment and structure |
|
| >pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660 | Back alignment and structure |
|
| >pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358 | Back alignment and structure |
|
| >pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345 | Back alignment and structure |
|
| >pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358 | Back alignment and structure |
|
| >pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358 | Back alignment and structure |
|
| >pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377 | Back alignment and structure |
|
| >pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 | Back alignment and structure |
|
| >pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333 | Back alignment and structure |
|
| >pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 390 | |||
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 0.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 1e-130 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 1e-127 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 9e-53 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-47 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 2e-45 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 9e-41 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 4e-38 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 2e-37 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 4e-37 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 1e-35 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-34 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 4e-33 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 1e-32 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 2e-31 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 1e-30 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 1e-30 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 8e-30 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 1e-25 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 2e-23 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 1e-22 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 1e-21 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 8e-21 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 3e-20 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 3e-16 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 6e-15 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 3e-13 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 2e-10 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 9e-10 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 9e-10 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 1e-08 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-08 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 4e-08 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 1e-07 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 1e-07 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 8e-07 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 2e-05 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 3e-05 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 5e-05 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 1e-04 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 1e-04 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 2e-04 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 2e-04 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 8e-04 |
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 516 bits (1332), Expect = 0.0
Identities = 121/372 (32%), Positives = 189/372 (50%), Gaps = 28/372 (7%)
Query: 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRI 70
+ + ++G GFIG+HL E++L E +++ LD+ +D I L
Sbjct: 309 ACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH------PHF 362
Query: 71 QFHRLNI-KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
F +I H +E +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVK 422
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
KR+I ST EVYG + ED S I G + K RW Y+ +K
Sbjct: 423 YRKRIIFPSTSEVYGM---------------CSDKYFDEDHSNLIVGPVNKPRWIYSVSK 467
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
QL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P
Sbjct: 468 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDN---LNAARIGSSRAITQLILNLVEGSP 524
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+
Sbjct: 525 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLAS 584
Query: 309 YAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ K + V S +YG+GY D + R P + ++ L W PK + + ++
Sbjct: 585 FEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDE 644
Query: 367 TLTYQHRTYAEA 378
TL + RT
Sbjct: 645 TLDFFLRTVDLT 656
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 377 bits (971), Expect = e-130
Identities = 122/367 (33%), Positives = 189/367 (51%), Gaps = 28/367 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI-K 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L F +I
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISI 56
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 57 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S I G + K RW Y+ +KQL++R+I+A
Sbjct: 117 TSEVYG---------------MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWA 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 162 YGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH 278
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
V S +YG+GY D + R P + ++ L W PK + + ++ TL + RT
Sbjct: 279 FPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV 338
Query: 376 AEAIKQA 382
K +
Sbjct: 339 DLTDKPS 345
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 370 bits (952), Expect = e-127
Identities = 130/381 (34%), Positives = 193/381 (50%), Gaps = 29/381 (7%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
G +K + ++G GFIG HL ++IL T ++ +D+ D++ L+
Sbjct: 9 MGTLEAQTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-- 66
Query: 62 ESQTGADRIQFHRLNIKHDSRL-EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
+R+ F +I + E +K D+ + L AI TPA Y +PL +F
Sbjct: 67 ----KHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEAN 122
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LP+V+ + K L+ ST EVYG A DAS +G I K
Sbjct: 123 LPIVRSAVKYGKHLVFPSTSEVYGM---------------CADEQFDPDASALTYGPINK 167
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
RW YAC+KQL++R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F
Sbjct: 168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQF 223
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVR 299
+++R + + LVDGG +R F Y+ D I A++ +IEN A G I+N+GNP+N +VR
Sbjct: 224 LGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVR 283
Query: 300 QLAEMMTEVYAKVS--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
+LA M E+ A+ ++A V+ +S +YG GY D R+P + Q+LGW P+
Sbjct: 284 ELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQ 343
Query: 358 TSLWDLLESTLTYQHRTYAEA 378
+ D L A+A
Sbjct: 344 FTFDDALRQIFEAYRGHVADA 364
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 9e-53
Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 61/357 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
I + G GF+GSHL +K L+ H++ +D + ++H + G + +
Sbjct: 29 RILITGGAGFVGSHLTDK-LMMDGHEVTVVDNFFTGRKRNVEHWI------GHENFELIN 81
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ +E D +LA+ +P +Y P+ T+ +N I L ++ RL
Sbjct: 82 HDVVEPLYIE-----VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARL 136
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P+ P +D +V +P R Y K++ E
Sbjct: 137 LLASTSEVYGD------PEVHPQSEDYWGHV-----NPI------GPRACYDEGKRVAET 179
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV- 253
+ YA + G+E + R FN GPRM DG RV++ F L+ +PL +
Sbjct: 180 MCYAYMKQEGVEVRVARIFNTFGPRMH---MNDG------RVVSNFILQALQGEPLTVYG 230
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G Q+ R F Y+ D + ++ ++ + N+GNP E T+ + A+++ + S
Sbjct: 231 SGSQT-RAFQYVSDLVNGLVALMNSNV---SSPVNLGNPE-EHTILEFAQLIKNLVGSGS 285
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L E DD KR PD+ LGW P L + L + Y
Sbjct: 286 EIQFLSEAQ-------------DDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 329
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 1e-47
Identities = 63/379 (16%), Positives = 123/379 (32%), Gaps = 62/379 (16%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALD----VYNDKIKHLLEPESQTGADRIQFH 73
V G GF+GS+L +++L +++ +D + ++F
Sbjct: 37 VV----GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDH---------PAVRFS 83
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-- 131
+I D+ L L D +LA PL +N + L + +
Sbjct: 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL 143
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
K++++ + + + SP Y+ +K
Sbjct: 144 KKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND----SP------------YSMSKIF 187
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID--GPSEGVPRVLACFSNNLLRRQP 249
E ++ L R N GP G P+ V F L+ P
Sbjct: 188 GEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMP 247
Query: 250 LKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
L L G + R FI+++D ++ + G ++N+ + E ++ LA + E+
Sbjct: 248 LPLENGGVAT-RDFIFVEDVANGLIACAADG--TPGGVYNIASG-KETSIADLATKINEI 303
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGE---GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+++ D+S KR ++LG++ S+ D L
Sbjct: 304 --------------TGNNTELDRLPKRPW-DNSGKRFGSPEKARRELGFSADVSIDDGLR 348
Query: 366 STLTY--QHRTYAEAIKQA 382
T+ + + E I +
Sbjct: 349 KTIEWTKANLAVIEQIMRK 367
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-45
Identities = 74/362 (20%), Positives = 133/362 (36%), Gaps = 55/362 (15%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQF 72
P + + I + GAGGFI SH+ + L H ++A D N+ + + D
Sbjct: 26 PSENLKISITGAGGFIASHIARR-LKHEGHYVIASDWKKNEHMTEDM------FCDEFHL 78
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSENN 131
L + + + D NLAA + + +Y+N + + +++ N
Sbjct: 79 VDLRVM--ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING 136
Query: 132 -KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
KR + S+ +Y + K + + DA P + + ++ K
Sbjct: 137 IKRFFYASSACIYPE------FKQLETTNV---SLKESDAWP------AEPQDAFGLEKL 181
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E L + G+E I R N GP + G E P A F
Sbjct: 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTW----KGGREKAP---AAFCRKAQTSTDR 234
Query: 251 KLV--DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+ DG Q+ R+F +I + +E VL + ++ N+G+ V++ ++AEM+
Sbjct: 235 FEMWGDGLQT-RSFTFIDECVEGVLRLTKSD---FREPVNIGSDE-MVSMNEMAEMVLSF 289
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+ + G + R D +I ++LGW P L + L T
Sbjct: 290 --------------EEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITY 335
Query: 369 TY 370
+
Sbjct: 336 FW 337
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 9e-41
Identities = 70/366 (19%), Positives = 133/366 (36%), Gaps = 52/366 (14%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADR 69
P +P + G GFIGS+L E LL+ K++ LD + + + S+
Sbjct: 24 PAQPKVWLITGVAGFIGSNLLET-LLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 82
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
+F + +I++ D ++ AA+ + P+ + +N L ++ +
Sbjct: 83 FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 142
Query: 130 NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
+ + ++ YG LPK P SP YA
Sbjct: 143 AKVQSFTYAASSSTYGDH--PGLPKVEDTIGKPL--------SP------------YAVT 180
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
K + E G +R FN G R D +G V + +++++++
Sbjct: 181 KYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDP----NGAYAAV---IPKWTSSMIQGD 233
Query: 249 PLKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+ + DG S R F YI++ ++A LL A ++N+ ++ QL +
Sbjct: 234 DVYINGDGETS-RDFCYIENTVQANLLAATAGLDARNQVYNIAV-GGRTSLNQLFFAL-- 289
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGE---GYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L E V + Y + G D + D++ + LG+ PK + +
Sbjct: 290 -------RDGLAENGVSYHREPVYRDFREG--DVRHSLADISKAAKLLGYAPKYDVSAGV 340
Query: 365 ESTLTY 370
+ +
Sbjct: 341 ALAMPW 346
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 4e-38
Identities = 66/363 (18%), Positives = 118/363 (32%), Gaps = 83/363 (22%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLN 76
+T G GFIG HL L+ + ++ LD + ++ +
Sbjct: 12 IT----GGAGFIGGHLARA-LVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERD 66
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+ L +LA+ + +PLD + N ++ C+ +++
Sbjct: 67 LSD----------VRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVV 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAKQ 190
STCEVYG ED+ SP YA +K
Sbjct: 116 VGSTCEVYG---------------QADTLPTPEDSPLSPRSP------------YAASKV 148
Query: 191 LIERLIYAEGAENGLEFT-IVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+E + A + IVR FN GP P ++ NLL R
Sbjct: 149 GLEMVAGAHQRASVAPEVGIVRFFNVYGPGER--PD---------ALVPRLCANLLTRNE 197
Query: 250 LKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
L + DG Q R F YI D ++ ++ + P + N G+ ++V + ++
Sbjct: 198 LPVEGDGEQR-RDFTYITDVVDKLVALANRPL---PSVVNFGSGQ-SLSVNDVIRILQAT 252
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW-NPKTSLWDLLEST 367
P ++ + D + +Q+G + + + + T
Sbjct: 253 SPAAEVARKQPRP--------------NEITEFRADTALQTRQIGERSGGIGIEEGIRLT 298
Query: 368 LTY 370
L +
Sbjct: 299 LEW 301
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 2e-37
Identities = 51/370 (13%), Positives = 104/370 (28%), Gaps = 84/370 (22%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
VT G GF+G ++ E + + + L + ++ +
Sbjct: 7 VT----GGTGFLGQYVVES-IKNDGNTPIILTRSIGNKAI----------NDYEYRVSDY 51
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
L + D ++LAA + + + N I + C ENN +++
Sbjct: 52 T-LEDLINQLNDVDAVVHLAAT---RG-SQGKISEFHDNEILTQNLYDACYENNISNIVY 106
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAKQL 191
ST Y D E Y +K
Sbjct: 107 ASTISAYS---------------DETSLPWNEKELPLPDLM------------YGVSKLA 139
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E + + GL +R + G + + R F + L
Sbjct: 140 CEHIGNIYSRKKGLCIKNLRFAHLYGFNEK-------NNYMINR----FFRQAFHGEQLT 188
Query: 252 LV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L + R F+Y KDA ++V+ ++ FN+G+ + +T ++A + +
Sbjct: 189 LHANSVAK-REFLYAKDAAKSVIYALKQE--KVSGTFNIGS-GDALTNYEVANTINNAFG 244
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKR-IPDMTIINQQLGWNPKTSLWDLLESTLT 369
+ ++ D + + L ++ + +E
Sbjct: 245 N-------------KDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHL 291
Query: 370 YQHRTYAEAI 379
R +
Sbjct: 292 L-MRGLDDVP 300
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 4e-37
Identities = 78/367 (21%), Positives = 137/367 (37%), Gaps = 74/367 (20%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLN 76
VT G GFIGSHL +K L+E ++++ +D + + + + + + H +
Sbjct: 5 VT----GGAGFIGSHLVDK-LVELGYEVVVVDNLSSGRREFV--------NPSAELHVRD 51
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+K D IK D+ + AA T P+ N + V+++ + + ++
Sbjct: 52 LK-DYSWGAGIK-GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVV 109
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAKQ 190
S+ VYG D E+ S Y AK
Sbjct: 110 FASSSTVYG---------------DADVIPTPEEEPYKPISV------------YGAAKA 142
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-RQP 249
E + G+ VR N +GPR+ V+ F L R
Sbjct: 143 AGEVMCATYARLFGVRCLAVRYANVVGPRLR------------HGVIYDFIMKLRRNPNV 190
Query: 250 LKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGH--IFNVGNPHNEVTVRQLAEMMT 306
L+++ DG Q ++++Y++DA+EA L + + NVGN + V V +A+++
Sbjct: 191 LEVLGDGTQR-KSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNV-DAVRVLDIAQIVA 248
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
EV + E L T D G D +T + + GW P + + ++
Sbjct: 249 EV-LGLRPEIRLVPSTPDGRGWP--G----DVKYMTLAVTKLMKLTGWRPTMTSAEAVKK 301
Query: 367 TLTYQHR 373
T +
Sbjct: 302 TAEDLAK 308
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-35
Identities = 71/368 (19%), Positives = 130/368 (35%), Gaps = 58/368 (15%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRI 70
P T + G GFIGS+L EK LL+ ++ LD ++ + + S R
Sbjct: 23 FSPKTWLITGVAGFIGSNLLEK-LLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
F +I+ + E ++K D ++ AA+ + P+ T +N L ++
Sbjct: 82 CFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA 141
Query: 131 N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
+ + ++ YG LPK +P SP YA K
Sbjct: 142 QVQSFTYAASSSTYGDH--PALPKVEENIGNPL--------SP------------YAVTK 179
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ E G + +R FN G R D +G V + ++ +L+
Sbjct: 180 YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDP----NGAYAAV---IPKWTAAMLKGDD 232
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ + G++ R F YI + I+ +L A +I+NV + T+ +L+ +
Sbjct: 233 VYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAV-GDRTTLNELSGYI---- 287
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKR---IP----DMTIINQQLGWNPKTSLWD 362
L Y + R + D+T L + P + +
Sbjct: 288 -----YDELNLIHHIDKLSIKYR------EFRSGDVRHSQADVTKAIDLLKYRPNIKIRE 336
Query: 363 LLESTLTY 370
L ++ +
Sbjct: 337 GLRLSMPW 344
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-34
Identities = 77/364 (21%), Positives = 135/364 (37%), Gaps = 75/364 (20%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLN 76
+T G G IGSH+ E LLE K++ +D + + +HL + + F +
Sbjct: 26 IT----GICGQIGSHIAEL-LLERGDKVVGIDNFATGRREHLKD------HPNLTFVEGS 74
Query: 77 IKHDSRLEGLIK--MADLTINLAA-ICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K 132
I + + LI D ++ AA P D+ + +N + VV+ +NN
Sbjct: 75 IADHALVNQLIGDLQPDAVVHTAASYKDPDDW----YNDTLTNCVGGSNVVQAAKKNNVG 130
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
R ++F T YG P ++PA S YA +K
Sbjct: 131 RFVYFQTALCYGVK-PIQQPVRLDHPRNPA-------NSS------------YAISKSAN 170
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E Y E +GL+F R N +GPR V L F L + +
Sbjct: 171 ED--YLEY--SGLDFVTFRLANVVGPR------------NVSGPLPIFFQRLSEGKKCFV 214
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
+++R F+++KD A + ++ ++ + +V +++L + + +
Sbjct: 215 ---TKARRDFVFVKDLARATVRAVDG---VGHGAYHFSS-GTDVAIKELYDAV----VEA 263
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
+ EP E G DD+ + D + Q G T L + + + + Y
Sbjct: 264 MALPSYPEP-------EIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAY-F 315
Query: 373 RTYA 376
R Y
Sbjct: 316 REYG 319
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 4e-33
Identities = 58/361 (16%), Positives = 112/361 (31%), Gaps = 68/361 (18%)
Query: 22 MI---GAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLN 76
MI G GFIGS++ + + + IL +D K +L++ + +
Sbjct: 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-----IADYMDKED 55
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ + A + +++ + + N+ + ++ YC E ++
Sbjct: 56 FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDN--NYQYSKELLHYCLEREIPFLY 113
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ YG + +S + P + Y +K L + +
Sbjct: 114 ASSAATYGG--RTSDFIESREYEKP--------LNV------------YGYSKFLFDEYV 151
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV--D 254
E + R FN GPR G V + L + KL
Sbjct: 152 RQILPEANSQIVGFRYFNVYGPREGH----KGSMASVAFH---LNTQLNNGESPKLFEGS 204
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
R F+Y+ D + L +EN IFN+G + + +A+ + K
Sbjct: 205 ENFK-RDFVYVGDVADVNLWFLENGV---SGIFNLGTGR-AESFQAVADATLAYHKKGQI 259
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIP-----DMTIINQQLGWNPKTSLWDLLESTLT 369
E Y D R D+T + P ++ + + +
Sbjct: 260 E---------------YIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMA 304
Query: 370 Y 370
+
Sbjct: 305 W 305
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-32
Identities = 57/361 (15%), Positives = 112/361 (31%), Gaps = 68/361 (18%)
Query: 22 MI---GAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLN 76
MI G GFIGS++ + + + IL +D K +L++ + +
Sbjct: 48 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-----IADYMDKED 102
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ + A + +++ + + N+ + ++ YC E ++
Sbjct: 103 FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDN--NYQYSKELLHYCLEREIPFLY 160
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ YG + +S + P + + +K L + +
Sbjct: 161 ASSAATYGG--RTSDFIESREYEKP--------LNV------------FGYSKFLFDEYV 198
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV--D 254
E + R FN GPR G V + L + KL
Sbjct: 199 RQILPEANSQIVGFRYFNVYGPREGH----KGSMASVAFH---LNTQLNNGESPKLFEGS 251
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
R F+Y+ D + L +EN IFN+G + + +A+ + K
Sbjct: 252 ENFK-RDFVYVGDVADVNLWFLENGV---SGIFNLGTGR-AESFQAVADATLAYHKKGQI 306
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIP-----DMTIINQQLGWNPKTSLWDLLESTLT 369
E Y D R D+T + P ++ + + +
Sbjct: 307 E---------------YIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMA 351
Query: 370 Y 370
+
Sbjct: 352 W 352
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-31
Identities = 53/370 (14%), Positives = 126/370 (34%), Gaps = 60/370 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G+ G IG+ L + + K ++A D +++ ++ I+F L++
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASD--------IVQRDT----GGIKFITLDVS 49
Query: 79 HDSRLEGLIKMADLT--INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+ ++ ++ + +LA I + A P N +++ ++ ++++
Sbjct: 50 NRDEIDRAVEKYSIDAIFHLAGILS-AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVV 108
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST V+G + + +I + R + K E L
Sbjct: 109 IPSTIGVFGPE-----TPKNKVPSI----------------TITRPRTMFGVTKIAAELL 147
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ GL+ +R I + + P+ G ++R+ K
Sbjct: 148 GQYYYEKFGLDVRSLRYPGIISYKAE-------PTAGTTDYAVEIFYYAVKREKYKCYLA 200
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGH--IFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
+Y+ DA++A++ + E +NV T +L + E
Sbjct: 201 PNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA--YTFTPSELYSKIKERI---- 254
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P ++ KE + + + D + + + G++ + L ++ + +
Sbjct: 255 -------PEFEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISE 307
Query: 374 TYAEAIKQAV 383
K A+
Sbjct: 308 KLGIEGKHAL 317
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-30
Identities = 65/361 (18%), Positives = 140/361 (38%), Gaps = 76/361 (21%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLN 76
VT G GFIGSH+ +K L E+ ++I+ +D + + + + + + + +
Sbjct: 6 VT----GGAGFIGSHVVDK-LSES-NEIVVIDNLSSGNEEFV--------NEAARLVKAD 51
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+ ++ +K A+ ++AA P + +N + +++ + R++
Sbjct: 52 LA-ADDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIV 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAKQ 190
ST VYG + ED S Y +K
Sbjct: 111 FTSTSTVYG---------------EAKVIPTPEDYPTHPISL------------YGASKL 143
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E LI + ++ I R N IG R G+ + + L
Sbjct: 144 ACEALIESYCHTFDMQAWIYRFANVIGRRST--HGV---------IYDFIMKLKRNPEEL 192
Query: 251 KLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+++ +G Q+ +++IYI D ++A+L + +IFN+G+ +++ V+++AE++ E
Sbjct: 193 EILGNGEQN-KSYIYISDCVDAMLFGLRGDE--RVNIFNIGS-EDQIKVKRIAEIVCEEL 248
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
P + + +G D + + + ++LGW P+ + + + +
Sbjct: 249 GL--------SPRFRFTGGDRGWKG--DVPVMLLSIEKL-KRLGWKPRYNSEEAVRMAVR 297
Query: 370 Y 370
Sbjct: 298 D 298
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-30
Identities = 57/369 (15%), Positives = 116/369 (31%), Gaps = 69/369 (18%)
Query: 18 VTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYND--KIKHLLEPESQTGADRIQFH 73
+T G GF+GS+L E K++ LD + + + I F
Sbjct: 15 IT----GGAGFVGSNLAFH-FQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFK 69
Query: 74 RLNIKHDSRLEGLIKMA-----DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 128
I D ++ D + AA+ N + +N+ L +++
Sbjct: 70 GEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLN--QELVMKTNYQAFLNLLEIAR 127
Query: 129 ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
++I+ S+ VYG + P + P + Y +
Sbjct: 128 SKKAKVIYASSAGVYG---NTKAPNVVGKNESPE--------NV------------YGFS 164
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
K ++ + + +R FN GPR + + + + + + +
Sbjct: 165 KLCMDEFVLSHSN--DNVQVGLRYFNVYGPREFY----KEKTASM---VLQLALGAMAFK 215
Query: 249 PLKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+KL G Q R F+YI+D I+A + ++ ++NVG + ++ ++ E
Sbjct: 216 EVKLFEFGEQL-RDFVYIEDVIQANVKAMKAQ---KSGVYNVGY-SQARSYNEIVSILKE 270
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYD-DSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ Y + L + P L ++
Sbjct: 271 HLGD--------------FKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKD 316
Query: 367 TLTYQHRTY 375
L + H +
Sbjct: 317 YLPHIHAIF 325
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 8e-30
Identities = 55/356 (15%), Positives = 116/356 (32%), Gaps = 55/356 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I +IGA G IG+ L +K+ K+ + V I+ L +G F +N
Sbjct: 5 ILIIGACGQIGTELTQKLR-----KLYGTENVIASDIRKLNTDVVNSG----PFEVVNAL 55
Query: 79 HDSRLEGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+++E L+++ +AA+ + A P N V+ K++
Sbjct: 56 DFNQIEHLVEVHKITDIYLMAALLS-ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIF 114
Query: 136 HFSTCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
S+ V+G T P+ + + P+ + Y +KQ ER
Sbjct: 115 WPSSIAVFGPTTPKENTPQYTIME--PS--------TV------------YGISKQAGER 152
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
G++ +R I P G + + +
Sbjct: 153 WCEYYHNIYGVDVRSIRYPGLISWSTP-------PGGGTTDYAVDIFYKAIADKKYECFL 205
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
+++ +Y+ DAI+A + +++ P + T ++A + +
Sbjct: 206 SSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKK------- 258
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P ++ + + + DS D + + W L + + + +
Sbjct: 259 ----HIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEH 310
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-25
Identities = 53/338 (15%), Positives = 95/338 (28%), Gaps = 82/338 (24%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+T GA GF+G +L + T H I +
Sbjct: 5 IT----GAKGFVGKNLKADLTSTTDHHIFEVHRQTK------------------------ 36
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
+ LE + AD ++LA + P + N V+ + N K I
Sbjct: 37 --EEELESALLKADFIVHLAGVNRPEH----DKEFSLGNVSYLDHVLDILTRNTKKPAIL 90
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ + D+P Y +K E+L+
Sbjct: 91 LSSSIQATQ--------DNP----------------------------YGESKLQGEQLL 114
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
E G I R N G P+ V+A F + R + +++ D
Sbjct: 115 REYAEEYGNTVYIYRWPNLFGKWCK-------PNYN--SVIATFCYKIARNEEIQVNDRN 165
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+ T Y+ D + + IE + V N VT+ ++ +++ +
Sbjct: 166 V-ELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFK-VTLGEIVDLLYKFKQSRLDRT 223
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
+ + Y S + + G
Sbjct: 224 LPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGS 261
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 2e-23
Identities = 64/382 (16%), Positives = 114/382 (29%), Gaps = 59/382 (15%)
Query: 24 GAGGFIGSHLCEKIL-----------LETPHKILALDVYN----DKIKHLLEPESQTGAD 68
G G+ G + L L + + I +
Sbjct: 18 GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGK 77
Query: 69 RIQFHRLNIKHDSRLEGLIK--MADLTINLAA-------ICTPADYNTRPLDTIYSNFID 119
I+ + +I L K D ++ + + + T ++N I
Sbjct: 78 SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSR----AVYTQHNNVIG 133
Query: 120 ALPVVKYCSE--NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
L V+ E L+ T YG + + L S
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQA---SS 190
Query: 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD------FIPGIDGPSE 231
Y +K I G+ T + G + D +
Sbjct: 191 F------YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244
Query: 232 GVPRVLACFSNNLLRRQPLKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNV 289
L F PL + GGQ+ R ++ I+D ++ V + I NPA+A +FN
Sbjct: 245 VFGTALNRFCVQAAVGHPLTVYGKGGQT-RGYLDIRDTVQCVEIAIANPAKAGEFRVFNQ 303
Query: 290 GNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
+ +V +LA ++T+ +K+ + ++ TV E + T +
Sbjct: 304 FT--EQFSVNELASLVTKAGSKLGLDV--KKMTVPNPRVE------AEEHYYNAKHTKL- 352
Query: 350 QQLGWNPKTSLWDLLESTLTYQ 371
+LG P LL+S L +
Sbjct: 353 MELGLEPHYLSDSLLDSLLNFA 374
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 96.0 bits (240), Expect = 1e-22
Identities = 76/374 (20%), Positives = 124/374 (33%), Gaps = 97/374 (25%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG-----ADRIQFHRLNIK 78
GAG FIGSH+ E LL ++ LD +L TG + F R++++
Sbjct: 8 GAG-FIGSHIVED-LLARGLEVAVLD-------NL-----ATGKRENVPKGVPFFRVDLR 53
Query: 79 HDSRLEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+E + + AA + P+ N + L +++ C + ++L+
Sbjct: 54 DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLV 113
Query: 136 HFST-CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAK 189
ST +YG+ P +E SP YA +K
Sbjct: 114 FASTGGAIYGEV--------------PEGERAEETWPPRPKSP------------YAASK 147
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
E + G GL++ +R N GPR D G + V +L+ P
Sbjct: 148 AAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDP----HGEAGVVAIFA----ERVLKGLP 199
Query: 250 LKLV------DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
+ L D G R ++Y+ D EA L + + I+NVG T R++
Sbjct: 200 VTLYARKTPGDEGCV-RDYVYVGDVAEAHALALFSL----EGIYNVGTGE-GHTTREVLM 253
Query: 304 MMTEVYAK----VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTS 359
+ E K + V K GW PK
Sbjct: 254 AVAEAAGKAPEVQPAPPRPGDLERSVL----------SPLKL--------MAHGWRPKVG 295
Query: 360 LWDLLESTLTYQHR 373
+ + T+ + R
Sbjct: 296 FQEGIRLTVDH-FR 308
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 94.0 bits (234), Expect = 1e-21
Identities = 53/364 (14%), Positives = 110/364 (30%), Gaps = 60/364 (16%)
Query: 19 TICMIGAGGFIGSHLCEKIL------LETPHKILALDVYNDKIKHLLEPESQTGAD-RIQ 71
I +IGA G +G L ++++ + K +DV +PE+ G +
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV--------FQPEAPAGFSGAVD 67
Query: 72 FHRLNIKHDSRLEGLIKM-ADLTINLAAICT------PADYNTRPLDTIYSNFIDALPVV 124
++ E L++ D+ +LAAI + LD DA+ +
Sbjct: 68 ARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTR-YLFDAIRIA 126
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
R++ S+ V+G + +P + P S
Sbjct: 127 NGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTT--PLT--------------------S 164
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y K + E L+ + +R P+ +
Sbjct: 165 YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK-------PNAAASGFFSNILREP 217
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
L Q L + + A+ ++ G N+ P TV + E
Sbjct: 218 LVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEA 277
Query: 305 MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ +V + + EP + + + ++LG+ ++S +++
Sbjct: 278 LRKVAGEKAVALIRREPNEMI-------MRMCEGWAPGFEAKRA-RELGFTAESSFEEII 329
Query: 365 ESTL 368
+ +
Sbjct: 330 QVHI 333
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 8e-21
Identities = 66/366 (18%), Positives = 112/366 (30%), Gaps = 94/366 (25%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82
GAG +GS+L E L H+IL +D K + L + ++
Sbjct: 28 GAG-CLGSNLIEH-WLPQGHEILVIDNFATGKREVLPPVA------GLSVIEGSVTDAGL 79
Query: 83 LEGLIKM--ADLTINLAA-ICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFS 138
LE ++ AA P D + +N ++ V K S+ KRL++F
Sbjct: 80 LERAFDSFKPTHVVHSAAAYKDPDD----WAEDAATNVQGSINVAKAASKAGVKRLLNFQ 135
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAKQLIE 193
T YG PA + D+ + Y +K E
Sbjct: 136 TALCYG---------------RPATVPIPIDSPTAPFTS------------YGISKTAGE 168
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
+ + + +R N GPR+ P +P L Q
Sbjct: 169 AFLMM----SDVPVVSLRLANVTGPRLAIGP--------IPTFYK----RLKAGQK---C 209
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
+ R F+ + D + L ++ +FNV +++++ +++
Sbjct: 210 FCSDTVRDFLDMSDFLAIADLSLQEGRP--TGVFNVST-GEGHSIKEVFDVV----LDYV 262
Query: 314 GEAALEEPTV------DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
G E V DV S D K + GW K D +
Sbjct: 263 GATLAEPVPVVAPGADDVPSV------VLDPSK-------TETEFGWKAKVDFKDTITGQ 309
Query: 368 LTYQHR 373
L + +
Sbjct: 310 LAWYDK 315
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 3e-20
Identities = 62/386 (16%), Positives = 116/386 (30%), Gaps = 85/386 (22%)
Query: 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRI 70
RP V ++GA G +G H + H ++ + + +I+ L
Sbjct: 7 LSRPGAHVKYAVLGATGLLGHHAARA-IRAAGHDLVLIHRPSSQIQRL-------AYLEP 58
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYS-NFIDALPVVKYCSE 129
+ + + LE ++ D I A R + P C +
Sbjct: 59 ECRVAEMLDHAGLERALRGLDGVIFSAG---YYPSRPRRWQEEVASALGQTNPFYAACLQ 115
Query: 130 NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
R+++ + + P+ P + Y L S Y
Sbjct: 116 ARVPRILYVGSAYAMPRH-----PQGLPGHEGLFYDSLPSGKSS------------YVLC 158
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
K ++ E A NGL I P +G D P RV+ N +
Sbjct: 159 KWALDEQAR-EQARNGLPVVIGIPGMVLGEL-DIGP-------TTGRVITAIGNGEMTH- 208
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMM--- 305
V G ++ I +A +L+ +E G + + + + + L +
Sbjct: 209 ---YVAGQRN---VIDAAEAGRGLLMALERG--RIGERYLLTGHN--LEMADLTRRIAEL 258
Query: 306 --------------------TEVYAKVSG-EAALEEPTVDVSSKEFYGEGYDDSDKRIPD 344
+ +VSG L+E ++V + + D K
Sbjct: 259 LGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQF---L-DGRK---- 310
Query: 345 MTIINQQLGWNPKTSLWDLLESTLTY 370
++LG+ T+L D L + +
Sbjct: 311 ---AREELGFFSTTALDDTLLRAIDW 333
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-16
Identities = 34/263 (12%), Positives = 70/263 (26%), Gaps = 71/263 (26%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG--ADRIQFHRLNIKHDS 81
GA G +GS + L H++ D+ + G + ++
Sbjct: 9 GAAGGVGSAIRPH-LGTLAHEVRLSDIVD------------LGAAEAHEEIVACDLADAQ 55
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIY-SNFIDALPVVKYCSENN-KRLIHFST 139
+ L+K D I+L + RP + I +N I A + + R++ S+
Sbjct: 56 AVHDLVKDCDGIIHLGGVSVE-----RPWNDILQANIIGAYNLYEAARNLGKPRIVFASS 110
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----SPCIFGSIEKQRWSYACAKQLIER 194
G P + + S Y +K E
Sbjct: 111 NHTIGYY--------------PRTTRIDTEVPRRPDSL------------YGLSKCFGED 144
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV- 253
L + +E +R + D + + L+ L ++
Sbjct: 145 LASLYYHKFDIETLNIRIGSCFPKPKD--------ARMMATWLSVDDFMRLMKRAFVAPK 196
Query: 254 --------DGGQSQRTFIYIKDA 268
+ ++ +
Sbjct: 197 LGCTVVYGASANT-ESWWDNDKS 218
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 6e-15
Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 37/199 (18%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
GA G +G + E+ L + D+ L+P + + ++ + +
Sbjct: 10 GAAGQLGRVMRER-LAPMAEILRLADLSP------LDPA----GPNEECVQCDLADANAV 58
Query: 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEV 142
++ D ++L I + + N I + + + R++ S+
Sbjct: 59 NAMVAGCDGIVHLGGISVEKPFE----QILQGNIIGLYNLYEAARAHGQPRIVFASSNHT 114
Query: 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE 202
G + P+ L D Y +K E L +
Sbjct: 115 IG-----YYPQTERLGPDVPARPD----GL------------YGVSKCFGENLARMYFDK 153
Query: 203 NGLEFTIVRPFNWIGPRMD 221
G E +VR + +
Sbjct: 154 FGQETALVRIGSCTPEPNN 172
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 3e-13
Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 63/274 (22%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNI 77
I +IGA GF+GS L + L ++ A+ V + +KIK + ++ + ++
Sbjct: 6 KIVLIGASGFVGSALLNE-ALNRGFEVTAV-VRHPEKIK--------IENEHLKVKKADV 55
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
+ + K AD I+ +Y ID + R +
Sbjct: 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDG------VKKAGVNRFLM 109
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
GS L P ++ P K L E +
Sbjct: 110 VG-------GAGS-------LFIAPGLRLMDSGEVP---------ENILPGVKALGEFYL 146
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
E +++ P P R L + + + G
Sbjct: 147 NFLMKEKEIDWVFFSP-----------AADMRPGVRTGRYR------LGKDDMIVDIVGN 189
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
I ++D A++ +E+P + + F +G
Sbjct: 190 S----HISVEDYAAAMIDELEHP-KHHQERFTIG 218
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 2e-10
Identities = 54/332 (16%), Positives = 110/332 (33%), Gaps = 52/332 (15%)
Query: 9 DLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPH---KILAL--------------DVY 51
+L G + T+ + GA GF+G +L + LL +++ L +
Sbjct: 65 NLPGPSPELRTVLLTGATGFLGRYLVLE-LLRRLDVDGRLICLVRAESDEDARRRLEKTF 123
Query: 52 NDKIKHLLEPESQTGADRIQFH-------RLNIKHDSRLEGLIKMADLTINLAAICTPAD 104
+ LL + ADR++ L + L + DL ++ AA +
Sbjct: 124 DSGDPELLRHFKELAADRLEVVAGDKSEPDLGL-DQPMWRRLAETVDLIVDSAA---MVN 179
Query: 105 YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163
+ N +++ K + ST +V S +D+ +R
Sbjct: 180 AF-PYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPT 238
Query: 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFI 223
+ + G Y +K E L+ L + R +
Sbjct: 239 RTVDGGWA---GG--------YGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSY-- 285
Query: 224 PGIDGPSEGVPRVL-ACFSNNLLRRQPLKLVDGGQSQRTFI------YIKDAIEAVLLMI 276
G S+ V R++ + + + R + G QR ++ +AI + +
Sbjct: 286 AGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARV 345
Query: 277 ENPARANGHIFNVGNPH-NEVTVRQLAEMMTE 307
+ A ++V NPH + + + + + + E
Sbjct: 346 AGSSLAGFATYHVMNPHDDGIGLDEYVDWLIE 377
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 9e-10
Identities = 66/369 (17%), Positives = 128/369 (34%), Gaps = 75/369 (20%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLE----------TPHKILALDVYNDKIKHLLEPE 62
PI T C++G GF+ S L K+LL+ P K+ HLLE +
Sbjct: 5 HPIGKKTACVVGGTGFVASLLV-KLLLQKGYAVNTTVRDPDN-------QKKVSHLLELQ 56
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA-- 120
++ R ++ + E I D ++A TP + + + ++ I
Sbjct: 57 ---ELGDLKIFRADLTDELSFEAPIAGCDFVFHVA---TPVHFAS---EDPENDMIKPAI 107
Query: 121 ---LPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED--ASPC 173
+ V+K C+ KR+I S+ + + + D V+ E
Sbjct: 108 QGVVNVMKACTRAKSVKRVILTSSA----AAV-------TINQLDGTGLVVDEKNWTDIE 156
Query: 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233
S + W Y +K L E+ + EN ++ V P G + S +
Sbjct: 157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGS---SLTSDVPSS--I 211
Query: 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEA-VLLMIENPARANG-HIFNVGN 291
++ + N +K + + +++D A + + E + A+G +I N
Sbjct: 212 GLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVA-EKES-ASGRYICCAAN 269
Query: 292 PHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
+LA+ +++ Y + + D K S+K +
Sbjct: 270 TSV----PELAKFLSKRY----PQYKVPTDFGDFPPKSKL---IISSEKL--------VK 310
Query: 352 LGWNPKTSL 360
G++ K +
Sbjct: 311 EGFSFKYGI 319
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 9e-10
Identities = 43/348 (12%), Positives = 96/348 (27%), Gaps = 99/348 (28%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADR----IQFHR 74
I + G G +G L + L H++ L A +Q
Sbjct: 5 KILIAGCG-DLGLELARR-LTAQGHEVTGLR---------------RSAQPMPAGVQTLI 47
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY----SNFIDALPVVKYCSEN 130
++ L ++ + + ++Y+ Y N + AL
Sbjct: 48 ADVTRPDTLASIVHLRPEILVYCV--AASEYSDEHYRLSYVEGLRNTLSALEGAPL---- 101
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
+ + S+ VYG+ + +L +D+P K+
Sbjct: 102 -QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFS------------------------GKR 136
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
++E AE TI+R GI GP + + Q
Sbjct: 137 MLE----AEALLAAYSSTILRF-----------SGIYGPGRLRM---------IRQAQTP 172
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARAN-GHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ + I+ D + +I+ + A ++ V + + + ++
Sbjct: 173 EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQ-PLP-------VHDLL 224
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
++ + P + K++ + + G+
Sbjct: 225 RWLADRQGIAYPA---GATPPVQGN-----KKLSNARL--LASGYQLI 262
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 1e-08
Identities = 57/360 (15%), Positives = 110/360 (30%), Gaps = 62/360 (17%)
Query: 24 GAGGFIGSHLCEKILLETPHKI--LALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
G GF G L L + +L E+ AD +Q +I+ +
Sbjct: 16 GHTGFKGGWLS-LWLQTMGATVKGYSLTAPTVPSLF----ETARVADGMQSEIGDIRDQN 70
Query: 82 RLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH--F 137
+L I+ ++ ++AA + P++T +N + + +++
Sbjct: 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 130
Query: 138 STCEVYG-KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
++ + Y K ++ + Y K A +
Sbjct: 131 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQH------ 184
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN--LLRRQPLKLVD 254
G VR N IG G VP +L F + ++ R P
Sbjct: 185 -------GTAVATVRAGNVIGG------GDWALDRIVPDILRAFEQSQPVIIRNP----- 226
Query: 255 GGQSQRTFIYIKDAIEAVLLMIE---NPARANGHIFNVG-NPHNEVTVRQLAEMMTEVYA 310
+ R + ++ + + LL+ + +N G N + V+ + E M + +
Sbjct: 227 --HAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWG 284
Query: 311 KVSGEAALEEPTVDVSSKEFYGEG---YDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ + + E D K QLGW+P+ +L LE
Sbjct: 285 E--------GASWQLDGNAHPHEAHYLKLDCSK-------AKMQLGWHPRWNLNTTLEYI 329
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 2e-08
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 60/279 (21%)
Query: 106 NTRPLDTIYSNFIDALPVVKYCSENN-KRLIHF-STCEVYGKTIGSFLPKDS--PLRQDP 161
NT P D IY N + ++ +N+ +L+ S+C +Y PK + P+ +
Sbjct: 73 NTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC-IY--------PKLAKQPMAES- 122
Query: 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221
+L+ G++E YA AK +L + + G ++ V P N GP +
Sbjct: 123 --ELLQ--------GTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDN 172
Query: 222 FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG-GQSQRTFIYIKDAIEAVLLMIENPA 280
F P S +P +L F ++ P +V G G R F+++ D A + ++E
Sbjct: 173 FHPS---NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 229
Query: 281 RANGHIFNVGNPH------NEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334
H + T+R+LA+ + AKV G + G
Sbjct: 230 EVWLENTQPMLSHINVGTGVDCTIRELAQTI----AKVVG---------------YKGRV 270
Query: 335 YDDSDK------RIPDMTIINQQLGWNPKTSLWDLLEST 367
D+ K ++ D+T ++ QLGW + SL L ST
Sbjct: 271 VFDASKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLAST 308
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 4e-08
Identities = 79/468 (16%), Positives = 155/468 (33%), Gaps = 126/468 (26%)
Query: 13 RPIKPVTIC-MIGAGGFIGSHL----C--EKILLETPHKILALDVYND-----------K 54
RP K V I ++G+G + + C K+ + KI L++ N K
Sbjct: 148 RPAKNVLIDGVLGSGK---TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 55 IKHLLEPESQTGADRIQFHRLNIKHD--SRLEGLIKMAD----LTINLAAICTPA----- 103
+ + ++P + +D +L I H + L L+K L + L +
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRI-HSIQAELRRLLKSKPYENCLLV-LLNVQNAKAWNAF 262
Query: 104 DYNTRPL-DTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIG---SFLPKD- 154
+ + + L T + D L ++ L + K + LP++
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322
Query: 155 ---SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVR 211
+P R +++ + W + +L +I E + N LE R
Sbjct: 323 LTTNPRRLSIIAESIRDG--LATW-----DNWKHVNCDKL-TTII--ESSLNVLEPAEYR 372
Query: 212 P-FNWIG--PRMDFIPGI-------DGPSEGVPRVLA-CFSNNLLRRQPLKLVDGGQSQR 260
F+ + P IP I D V V+ +L+ +QP +
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP-------KEST 425
Query: 261 TFIY-------IKDAIEAVL--LMIEN-------------PARANGHIFN-VGNPH-NEV 296
I +K E L ++++ P + + ++ +G+ H +
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH-HLKNI 484
Query: 297 TVRQLAEMMTEVY-------AKV--SGEAALEEPTV--DVSSKEFYGEGY----DDSDKR 341
+ + V+ K+ A ++ + +FY + Y D +R
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYER 543
Query: 342 IPDMTIIN--QQLGWN----PKTSLWDLLESTLTYQHRT-YAEAIKQA 382
+ + I++ ++ N T DLL L + + EA KQ
Sbjct: 544 LVN-AILDFLPKIEENLICSKYT---DLLRIALMAEDEAIFEEAHKQV 587
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 4e-08
Identities = 68/371 (18%), Positives = 125/371 (33%), Gaps = 90/371 (24%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
G G F+GS+L L + ++ D +L S +F +I++ +
Sbjct: 9 GCG-FLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKN 63
Query: 82 RLEGLIK--MADLTINLAA-------ICTP-ADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+ LI M D +LA I P D+ T+ N ++A V +Y +N
Sbjct: 64 DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTL--NLLEA--VRQYN--SN 117
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-----------SPCIFGSIEK 180
+I+ ST +VYG L + + Y + + SP
Sbjct: 118 CNIIYSSTNKVYGD-----LEQYKYNETETRYTCVDKPNGYDESTQLDFHSP-------- 164
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG-VPRV-LA 238
Y C+K ++ + GL + R + G R D +G V
Sbjct: 165 ----YGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQF--ATYD---QGWVGWFCQK 215
Query: 239 CFSNNLLRRQPLKLV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG-NPHNEV 296
+P + +G Q R ++ +D I + N ++ G+ FN+G N +
Sbjct: 216 AVEIKNGINKPFTISGNGKQV-RDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSL 274
Query: 297 TVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGE---GYD-----DSDKRIPDMTII 348
++ +L +++ + ++ + D K I
Sbjct: 275 SLLELFKLLEDY--------------CNIDMRFTNLPVRESDQRVFVADIKK-------I 313
Query: 349 NQQLGWNPKTS 359
+ W+PK S
Sbjct: 314 TNAIDWSPKVS 324
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 83/364 (22%), Positives = 133/364 (36%), Gaps = 70/364 (19%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
T+C+ GA GFIGS L LLE + + A V + K+KHLL+ + +
Sbjct: 7 TVCVTGASGFIGSWLV-MRLLERGYTVRAT-VRDPTNVKKVKHLLD--LPKAETHLTLWK 62
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA-----LPVVKYCSE 129
++ + + IK ++A TP D+ + + I L ++K C+
Sbjct: 63 ADLADEGSFDEAIKGCTGVFHVA---TPMDFES---KDPENEVIKPTIEGMLGIMKSCAA 116
Query: 130 NN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA-SPCIF-GSIEKQRWSY 185
+RL+ S+ T+ + P V E S F + + W Y
Sbjct: 117 AKTVRRLVFTSSA----GTV-NIQEHQLP--------VYDESCWSDMEFCRAKKMTAWMY 163
Query: 186 ACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245
+K L E+ + EN ++F + P +GP FI PS + L + +
Sbjct: 164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGP---FIMSSMPPS--LITAL-----SPI 213
Query: 246 RRQPLKLVDGGQSQRTFIYIKDAIEA-VLLMIENPARANG-HIFNVGNPHNEVTVRQLAE 303
Q Q F+++ D A + L ENP A G +I + + LA+
Sbjct: 214 TGNEAHYSIIRQGQ--FVHLDDLCNAHIYLF-ENPK-AEGRYICSSHDCII----LDLAK 265
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
M+ E Y + PT E S K LG+ K SL D+
Sbjct: 266 MLREKYPE------YNIPTEFKGVDENLKSVCFSSKKL--------TDLGFEFKYSLEDM 311
Query: 364 LEST 367
Sbjct: 312 FTGA 315
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 61/358 (17%), Positives = 126/358 (35%), Gaps = 71/358 (19%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILA----LDVYNDKIKHLLEPESQTGADRIQFHR 74
+C+ G GF+GS + K LLE + + + L ++++ F
Sbjct: 3 RVCVTGGTGFLGSWII-KSLLENGYSVNTTIRADPERKRDVSFLTNLPG--ASEKLHFFN 59
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA-----LPVVKYCSE 129
++ + I+ + A +P D+ L ++K C
Sbjct: 60 ADLSNPDSFAAAIEGCVGIFHTA---SPIDFAV---SEPEEIVTKRTVDGALGILKACVN 113
Query: 130 NN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE----DASPCIFGSIEKQRW 183
+ KR I+ S+ + SF KD VL E D S++ W
Sbjct: 114 SKTVKRFIYTSSG----SAV-SFNGKDKD--------VLDESDWSDVDLL--RSVKPFGW 158
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
+YA +K L E+ + G +NG++ + +G F+ S + + L
Sbjct: 159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGR---FVCPKLPDS--IEKAL-----V 208
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLA 302
L+ + ++ +++ D A + L+ EN G V + +++
Sbjct: 209 LVLGKKEQIGVTRFH---MVHVDDVARAHIYLL-ENSV-PGGRYNCSPFI---VPIEEMS 260
Query: 303 EMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
++++ Y + + TVD + D + K++ G++ K ++
Sbjct: 261 QLLSAKYPE------YQILTVDELKEIKGARLPDLNTKKL-------VDAGFDFKYTI 305
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 8e-07
Identities = 48/300 (16%), Positives = 91/300 (30%), Gaps = 53/300 (17%)
Query: 23 IGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL---EPESQTGADRIQFHRLNIKH 79
+G G IG+ L E IL VY + + + I + + +I
Sbjct: 7 VGVTGIIGNSLAE-ILPLADTPGGPWKVY------GVARRTRPAWHEDNPINYVQCDISD 59
Query: 80 DSRLEGLIKMADLTINLAAIC-----TPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+ + ++ + T + N ++ N +DA+ N K +
Sbjct: 60 PDDSQAKLSPLTDVTHVFYVTWANRSTEQE-NCEANSKMFRNVLDAV---IPNCPNLKHI 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ + Y S+ +S P ED ++ + Y ++E
Sbjct: 116 SLQTGRKHYMGPFESYGKIESH--DPP----YTEDLPR-----LKYMNFYYDLEDIMLEE 164
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPR----MDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
+ + GL +++ RP N G M+ + + V A + + L
Sbjct: 165 V----EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTL--------CVYAAICKHE--GKVL 210
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIE--NPARANGHIFNVGNPH---NEVTVRQLAEMM 305
+ + + DA I A FNV N + + LAE
Sbjct: 211 RFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQF 270
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 21/131 (16%)
Query: 24 GAGGFIGSHLCEKILLETP-HKILALDV--YNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
G GFIGS+ + P + LD Y +L DR++ +I
Sbjct: 11 GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILG----DRVELVVGDIADA 66
Query: 81 SRLEGLIKMADLTINLAA-------ICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++ L AD ++ AA + P+ + I++NFI +++ + + R
Sbjct: 67 ELVDKLAAKADAIVHYAAESHNDNSLNDPSPF-------IHTNFIGTYTLLEAARKYDIR 119
Query: 134 LIHFSTCEVYG 144
H ST EVYG
Sbjct: 120 FHHVSTDEVYG 130
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 37/273 (13%), Positives = 79/273 (28%), Gaps = 82/273 (30%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I ++G+ G +G L + L T ++I A R ++
Sbjct: 3 IFIVGSTGRVGKSLLKS-LSTTDYQIYAG------------------------AR-KVEQ 36
Query: 80 DSRLEGL-IKMADLTIN---LAAICTPADY-----NTRPLDTIYSNFIDALPVVKYCSEN 130
+ + D+ +A D + + + A+ +++ +
Sbjct: 37 VPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKA 96
Query: 131 N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
KR I S + L+ + G+ Y AK
Sbjct: 97 EVKRFILLS-----------------------TIFSLQPEKWI---GAGFDALKDYYIAK 130
Query: 190 QLIERLIYAEGAENGLEFTIVRP---FNWIGPRMDFIPGIDGPSEGVPR------VLACF 240
+ + E L++TI++P I D S +
Sbjct: 131 HFADLYLTKE---TNLDYTIIQPGALTE--EEATGLIDINDEVSASNTIGDVADTIKELV 185
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVL 273
+ + + + +G + IK+A+E++L
Sbjct: 186 MTDHSIGKVISMHNGKTA------IKEALESLL 212
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 5e-05
Identities = 39/274 (14%), Positives = 77/274 (28%), Gaps = 74/274 (27%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ ++GAGG I H+ ++ + K KI Q ++
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-------PTNSQIIMGDVL 77
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ + L+ ++ D LD ++ I A+ + + KRLI
Sbjct: 78 NHAALKQAMQGQD-----IVYANLT---GEDLDIQANSVIAAMK-----ACDVKRLIFVL 124
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ +Y + G F+ ++ + + I
Sbjct: 125 SLGIYDEVPGKFVEWNNAVIG------------------------EPLKPFRRAADAI-- 158
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+GLE+TI+RP W+ D
Sbjct: 159 --EASGLEYTILRP-AWL---------TDEDIIDYELTS----------------RNEPF 190
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292
+ T + K + +I+ P + G + P
Sbjct: 191 KGTIVSRKSVAALITDIIDKPEKHIGENIGINQP 224
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 24 GAGGFIGSHLCEKILLETP-HKILALDV--YNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
G GFIGS+ IL + P +++ +D Y +L + E R F + ++
Sbjct: 10 GGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE---DDPRYTFVKGDVADY 66
Query: 81 SRLEGLIKMADLTINLAA-------ICTPADY-NTRPLDTIYSNFIDALPVVKYCSENNK 132
++ L++ D ++LAA I +P + ++ + T +++ + +
Sbjct: 67 ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGT--YTLLES--IRRE--NPEV 120
Query: 133 RLIHFSTCEVYG 144
R +H ST EVYG
Sbjct: 121 RFVHVSTDEVYG 132
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 1e-04
Identities = 33/277 (11%), Positives = 67/277 (24%), Gaps = 68/277 (24%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I ++GA G GS + + H++LA+ V + P+ L +
Sbjct: 3 IAVLGATGRAGSAIVAE-ARRRGHEVLAV-VRD--------PQKAADRLGATVATLVKEP 52
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
E + D A + + ++ +F L V ++ +
Sbjct: 53 LVLTEADLDSVD-----AVVDALSVPWGSGRGYLHLDFATHL--VSLLRNSDTLAV---- 101
Query: 140 CEVYGKTIGSFLPKDSPLRQ--DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
+ +P P +
Sbjct: 102 --FILGSASLAMPGADHPMILDFPESAA----------------SQPWYDGALYQYYEYQ 143
Query: 198 AEGAENGLEFTIVRPFNWI--GPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + + P GP ++ G D G
Sbjct: 144 FLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDG-------------------- 183
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292
++ I + A+L +E+P A V +
Sbjct: 184 ----QSHITTGNMALAILDQLEHP-TAIRDRIVVRDA 215
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 61/368 (16%), Positives = 120/368 (32%), Gaps = 90/368 (24%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
G GF+G +L L E ++ ++ ++ L+I R+
Sbjct: 19 GVAGFVGKYLAN-HLTEQNVEV-----------FGTSRNNEAKLPNVEMISLDIMDSQRV 66
Query: 84 EGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPV---VKYCSENNKRLIHF- 137
+ +I D +LAA + D T +N L V V+ + + + I
Sbjct: 67 KKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCR--ILTI 124
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ---LIER 194
+ E YG LP++SP+ ++ SP Y +K ++ R
Sbjct: 125 GSSEEYGMI----LPEESPVSEENQLR----PMSP------------YGVSKASVGMLAR 164
Query: 195 LIYAEG----AENGLEFTIVRPFNWIGPR--MDFI-PGIDGPSEGVPRVLACFSNNLLRR 247
Y + + R FN IGP + F+ ++ + + +++
Sbjct: 165 -QYVKAYGMDIIHT------RTFNHIGPGQSLGFVTQDF---AKQIVDIEMEKQEPIIKV 214
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV--GNPHNEVTVRQLAEMM 305
L ++ R F ++D ++A L+ + G ++NV G ++ + ++
Sbjct: 215 GNL------EAVRDFTDVRDIVQAYWLLSQYGK--TGDVYNVCSGIGT---RIQDVLDL- 262
Query: 306 TEVYAKVSGEAALEEPTVDVS---SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
L V + + + I + GW P+ L
Sbjct: 263 -----------LLAMANVKIDTELNPLQLRP--SEVPTLIGSNKRLKDSTGWKPRIPLEK 309
Query: 363 LLESTLTY 370
L L
Sbjct: 310 SLFEILQS 317
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 50/275 (18%), Positives = 81/275 (29%), Gaps = 64/275 (23%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I +IGA G GS + E+ H++ A+ KI I + +I
Sbjct: 3 IGIIGATGRAGSRILEE-AKNRGHEVTAIVRNAGKITQT--------HKDINILQKDI-- 51
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ ++ ++ I +P + + I L + RL+
Sbjct: 52 FDLTLSDLSDQNVVVDAYGI-SPDEAEKHVTSL--DHLISVLN-----GTVSPRLLVVGG 103
Query: 140 -CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ G+ L + LR+ P Y + A AKQL
Sbjct: 104 AASLQIDEDGNTLLESKGLREAPYY------------------PTARAQAKQLEHLKS-- 143
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ +T + P P G G ++ + L G S
Sbjct: 144 --HQAEFSWTYISPSAMFEP---------GERTGDYQIG---------KDHLLFGSDGNS 183
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPH 293
FI ++D AVL IE P F V
Sbjct: 184 ---FISMEDYAIAVLDEIERP-NHLNEHFTVAGKL 214
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 23/139 (16%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIK---HLLEPESQTGADRIQFH 73
VT G GFIGSH ++L + A +V D + + R++F
Sbjct: 5 VT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 74 RLNIKHDSRLEGLIKMADLTINLAA-------ICTPADY-NTRPLDTIYSNFIDALPVVK 125
+I+ L ++ D ++ AA I + + T T + V
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGT--QTLLQC--AVD 116
Query: 126 YCSENNKRLIHFSTCEVYG 144
R++H ST +VYG
Sbjct: 117 A---GVGRVVHVSTNQVYG 132
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 100.0 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 100.0 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 100.0 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.98 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.98 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.97 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.97 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.97 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.97 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.96 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.96 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.96 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.95 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.95 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.95 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.94 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.94 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.94 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.94 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.94 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.94 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.93 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.93 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.93 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.92 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.92 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.92 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.92 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.92 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.92 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.92 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.92 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.92 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.92 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.92 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.92 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.91 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.91 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.91 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.91 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.91 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.91 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.91 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.91 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.91 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.91 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.91 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.91 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.9 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.9 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.9 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.9 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.9 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.9 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.9 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.9 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.9 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.9 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.9 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.9 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.9 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.9 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.9 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.9 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.9 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.9 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.9 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.9 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.9 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.9 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.89 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.89 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.89 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.89 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.89 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.89 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.89 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.89 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.89 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.89 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.89 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.89 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.89 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.89 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.89 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.89 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.89 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.89 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.89 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.89 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.89 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.89 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.89 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.89 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.88 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.88 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.88 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.88 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.88 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.88 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.88 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.88 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.88 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.88 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.88 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.88 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.88 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.88 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.88 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.88 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.88 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.88 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.88 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.88 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.88 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.88 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.88 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.88 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.88 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.88 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.88 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.88 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.88 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.88 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.88 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.88 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.88 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.88 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.88 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.88 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.88 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.88 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.87 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.87 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.87 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.87 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.87 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.87 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.87 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.87 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.87 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.87 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.87 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.87 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.87 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.87 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.87 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.87 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.87 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.87 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.87 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.87 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.87 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.87 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.87 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.86 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.86 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.86 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.86 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.86 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.86 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.86 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.86 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.86 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.86 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.86 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.86 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.86 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.86 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.86 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.86 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.86 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.85 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.85 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.85 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.85 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.85 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.85 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.85 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.85 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.84 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.84 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.84 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.84 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.84 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.84 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.84 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.84 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.84 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.83 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.83 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.83 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.83 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.82 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.82 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.81 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.81 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.81 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.81 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.81 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.8 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.78 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.78 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.78 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.77 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.77 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.77 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.77 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.76 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.76 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.76 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.76 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.76 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.75 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.75 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.75 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.74 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.71 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.67 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.64 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.64 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.61 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.57 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.55 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.45 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.44 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.38 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.37 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.31 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.3 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.29 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.29 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.24 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.23 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.19 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.06 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.92 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.92 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.89 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.88 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.81 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.81 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.8 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.77 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.76 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.76 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.69 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.59 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.57 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.53 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.5 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.42 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.41 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.31 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.29 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.27 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.26 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.21 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.19 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.14 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 98.14 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.06 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.97 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.94 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.93 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.91 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.9 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.88 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.88 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.85 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.84 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.76 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.74 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.72 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.67 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.66 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.6 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.6 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.59 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.59 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.57 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.55 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.51 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.5 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.5 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.49 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.48 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.48 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.47 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.47 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.47 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.47 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.46 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.46 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.42 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.41 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.41 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.4 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.39 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.38 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.38 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.35 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.32 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.32 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.31 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.3 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.3 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.29 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.28 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.26 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.23 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.22 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.22 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.2 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 97.2 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.19 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.19 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.19 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.16 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.16 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.15 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.15 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.15 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.14 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.14 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.14 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.13 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.12 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.09 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.09 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.09 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.08 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.07 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.06 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.03 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.02 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.01 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.01 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.01 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.01 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.0 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.0 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.97 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 96.96 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.94 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.94 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.93 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.92 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.89 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.88 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.88 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.87 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.86 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 96.86 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.85 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 96.84 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.84 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.84 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.83 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.81 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 96.81 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.76 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.76 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 96.75 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.75 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.72 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.72 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.7 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.7 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 96.69 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.69 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 96.66 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.66 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.65 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.65 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.63 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.61 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.6 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.59 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.58 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.58 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.56 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.55 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.55 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.54 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.52 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.52 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 96.52 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 96.52 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.51 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.51 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.49 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 96.49 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.48 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.47 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.47 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.47 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.46 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 96.46 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.45 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.45 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 96.44 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.44 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.42 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.41 | |
| 1cf2_P | 337 | Protein (glyceraldehyde-3-phosphate dehydrogenase) | 96.41 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.4 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.39 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.39 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.38 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.38 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 96.37 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.37 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 96.36 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.36 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.35 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.35 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.35 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.35 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 96.34 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-50 Score=378.82 Aligned_cols=323 Identities=20% Similarity=0.247 Sum_probs=264.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC----CCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG----ADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+.+|+|||||||||||++|+++|+++ |++|++++|................ ..+++++.+|+.|.+.+.++++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 45789999999999999999999999 9999999997643221111000000 058999999999999999999999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~----------- 170 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGN----------- 170 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCC-----------
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCC-----------
Confidence 99999999876555566778889999999999999999999 899999999999988777777777653
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+... ......++..++..+..+.+
T Consensus 171 -----------p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~ 232 (351)
T 3ruf_A 171 -----------PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDP-------NGAYAAVIPKWTAAMLKGDD 232 (351)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCC-------CSTTCCHHHHHHHHHHHTCC
T ss_pred -----------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCC-------CcchhhHHHHHHHHHHcCCC
Confidence 667899999999999999988889999999999999998652 22233578888999999999
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
+.+++++++.++|+|++|+|++++.++.......+++||++++ +.+|+.|+++.+.+.+|........+..
T Consensus 233 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------- 303 (351)
T 3ruf_A 233 VYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVG-DRTTLNELSGYIYDELNLIHHIDKLSIK-------- 303 (351)
T ss_dssp CEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHTTCCC-----E--------
T ss_pred cEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCC-CcccHHHHHHHHHHHhCccccccccccc--------
Confidence 9999999999999999999999999998843357899999997 7999999999999999974332211110
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
+............+|++|++++|||+|+++++++|+++++||+++.+
T Consensus 304 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 350 (351)
T 3ruf_A 304 YREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFLK 350 (351)
T ss_dssp EECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhc
Confidence 11112234456789999999999999999999999999999998754
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=381.35 Aligned_cols=342 Identities=37% Similarity=0.682 Sum_probs=269.8
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC-ChhHHHHhhcccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMAD 91 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~-d~~~~~~~~~~~d 91 (390)
..|.||+|||||||||||++|+++|++++|++|++++|+++....+.. ..+++++.+|++ |.+.+.++++++|
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~~d~~~~~~~~~~~d 93 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------HERMHFFEGDITINKEWVEYHVKKCD 93 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------STTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------CCCeEEEeCccCCCHHHHHHHhccCC
Confidence 357789999999999999999999999868999999998766554433 258999999999 9999999999999
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
+|||+|+...+..+..++...+++|+.++.+++++|++.+++|||+||.++||.....++.|+.+.
T Consensus 94 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~-------------- 159 (372)
T 3slg_A 94 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASA-------------- 159 (372)
T ss_dssp EEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCC--------------
T ss_pred EEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccc--------------
Confidence 999999988665556678889999999999999999988899999999999998766555554432
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
....|...|.+.|+.+|..+|.+++.++++ +++++++||+.+|||+..... ++......++..++..+..+.++.
T Consensus 160 -~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 234 (372)
T 3slg_A 160 -LTYGPINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIY---TPKEGSSRVVTQFLGHIVRGENIS 234 (372)
T ss_dssp -EEECCTTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTT---CSBSCSCHHHHHHHHHHHHTCCEE
T ss_pred -cccCCCCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCccccc---ccccccchHHHHHHHHHHcCCCcE
Confidence 112233357779999999999999999877 999999999999999865210 112233468888999999999999
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCC--cccCCcc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP--TVDVSSK 328 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~--~~~~~~~ 328 (390)
+.+++.+.++|+|++|+|++++.+++++.. ..+++||++++++.+|+.|+++.+.+.+|.+......+.. .......
T Consensus 235 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (372)
T 3slg_A 235 LVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSG 314 (372)
T ss_dssp EGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC---
T ss_pred EeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecccc
Confidence 998889999999999999999999998631 3678999999326999999999999999986554333211 1111111
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHH
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 379 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~ 379 (390)
.+.+..+.......+|++|+++.|||+|+++++++|+++++||+++.++..
T Consensus 315 ~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~ 365 (372)
T 3slg_A 315 AYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADAR 365 (372)
T ss_dssp ----------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHHHHH
T ss_pred ccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 222222234556789999999999999999999999999999998876553
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=366.99 Aligned_cols=311 Identities=20% Similarity=0.302 Sum_probs=253.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~- 89 (390)
++||+|||||||||||++|+++|+++ | ++|++++|.... ...+... ....+++++.+|+.|.+.+..++++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~~v~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~ 97 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-YETYKIINFDALTYSGNLNNVKSI---QDHPNYYFVKGEIQNGELLEHVIKER 97 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-CTTEEEEEEECCCTTCCGGGGTTT---TTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-CCCcEEEEEeccccccchhhhhhh---ccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence 56789999999999999999999999 7 778888876422 1111111 1125899999999999999999998
Q ss_pred -ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc-CCCCCCCCCCCCCcccccc
Q 016370 90 -ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI-GSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~-~~~~~e~~~~~~~~~~~~~ 166 (390)
+|+|||+|+......+..++...+++|+.++.+++++|++.+ ++|||+||.++|+... ..+++|+.+..
T Consensus 98 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~-------- 169 (346)
T 4egb_A 98 DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLA-------- 169 (346)
T ss_dssp TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCC--------
T ss_pred CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCC--------
Confidence 999999999886655667778899999999999999999999 8999999999999873 45667766653
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.. ...++..++..+..
T Consensus 170 --------------p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~-----------~~~~~~~~~~~~~~ 224 (346)
T 4egb_A 170 --------------PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQY-----------PEKLIPLMVTNALE 224 (346)
T ss_dssp --------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC-----------TTSHHHHHHHHHHT
T ss_pred --------------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCC-----------ccchHHHHHHHHHc
Confidence 66789999999999999998888999999999999999764 12577888899999
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+.++.+.+++...++|||++|+|++++.+++.+. .+++||++++ +.+|+.|+++.+.+.+|.+.......
T Consensus 225 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~------- 294 (346)
T 4egb_A 225 GKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR--VGEVYNIGGN-NEKTNVEVVEQIITLLGKTKKDIEYV------- 294 (346)
T ss_dssp TCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--TTCEEEECCS-CCEEHHHHHHHHHHHHTCCGGGCEEE-------
T ss_pred CCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--CCCEEEECCC-CceeHHHHHHHHHHHhCCCccccccc-------
Confidence 9999999999999999999999999999999874 6789999997 79999999999999999765322111
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
.........+.+|++|++++|||+|+++++++|+++++||+++.+.
T Consensus 295 -----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~ 340 (346)
T 4egb_A 295 -----TDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEEW 340 (346)
T ss_dssp -----CC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHH
T ss_pred -----CCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 1111234466799999999999999999999999999999987653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=358.90 Aligned_cols=300 Identities=16% Similarity=0.190 Sum_probs=253.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
+|+|||||||||||++|++.|+++ |++|++++|++.... + .+++++.+|+. .+.+.++++++|+|||+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~---------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~ 69 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA-I---------NDYEYRVSDYT-LEDLINQLNDVDAVVHL 69 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc-C---------CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence 479999999999999999999999 999999999843222 1 27899999999 99999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|+..... ++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 70 a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~----------------- 128 (311)
T 3m2p_A 70 AATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPL----------------- 128 (311)
T ss_dssp CCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCC-----------------
T ss_pred cccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCC-----------------
Confidence 9987543 667788999999999999999999 899999999999988777777777653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+... ..++..++..+..+.++.++++
T Consensus 129 -----p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~~~~~~~~~g~ 192 (311)
T 3m2p_A 129 -----PDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKN-----------NYMINRFFRQAFHGEQLTLHAN 192 (311)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC-------------CCHHHHHHHHHHTCCCEEESSB
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCC-----------CCHHHHHHHHHHcCCCeEEecC
Confidence 667899999999999999988889999999999999998651 1478888899999999999888
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGY 335 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
+++.++|+|++|+|++++.+++++. .+++||++++ +.+|+.|+++.+.+.+|.+......+.+ ..
T Consensus 193 ~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------~~ 257 (311)
T 3m2p_A 193 SVAKREFLYAKDAAKSVIYALKQEK--VSGTFNIGSG-DALTNYEVANTINNAFGNKDNLLVKNPN------------AN 257 (311)
T ss_dssp CCCCEEEEEHHHHHHHHHHHTTCTT--CCEEEEECCS-CEECHHHHHHHHHHHTTCTTCEEECSSS------------BC
T ss_pred CCeEEceEEHHHHHHHHHHHHhcCC--CCCeEEeCCC-CcccHHHHHHHHHHHhCCCCcceecCCC------------CC
Confidence 9999999999999999999999874 6889999997 7999999999999999976544433321 11
Q ss_pred CCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHHH
Q 016370 336 DDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIK 380 (390)
Q Consensus 336 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~ 380 (390)
.......+|++|+++.|||+|+++++++|+++++|++++.+...+
T Consensus 258 ~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~~~ 302 (311)
T 3m2p_A 258 EGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVPLW 302 (311)
T ss_dssp CSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-------
T ss_pred CCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccCcce
Confidence 334567899999999999999999999999999999988776653
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-48 Score=355.91 Aligned_cols=304 Identities=21% Similarity=0.306 Sum_probs=245.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|||||||||||++|+++|+++ | .+++++++........ ..+++++.+|+.| +.+.++++++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g-~~v~~~~~~~~~~~~~-------~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~ 70 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES-N-EIVVIDNLSSGNEEFV-------NEAARLVKADLAA-DDIKDYLKGAEEVWHI 70 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT-S-CEEEECCCSSCCGGGS-------CTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-C-CEEEEEcCCCCChhhc-------CCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence 578999999999999999999999 7 5555554433222111 2578999999999 8899999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|+.........++...+++|+.++.+++++|++.+ ++|||+||.++||.....+.+|+.+..
T Consensus 71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~----------------- 133 (313)
T 3ehe_A 71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTH----------------- 133 (313)
T ss_dssp CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCC-----------------
T ss_pred CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCC-----------------
Confidence 99776555667888999999999999999999988 899999999999988777777776653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC-CCeEEec
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR-QPLKLVD 254 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 254 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.. ..++..++..+..+ .++.+.+
T Consensus 134 -----~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 196 (313)
T 3ehe_A 134 -----PISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRST------------HGVIYDFIMKLKRNPEELEILG 196 (313)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCC------------CSHHHHHHHHHHHCTTEEEEST
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCC------------cChHHHHHHHHHcCCCceEEeC
Confidence 56689999999999999999889999999999999999765 14666777777666 5677888
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
++.+.++|+|++|+|++++.+++.. ..+++||++++ +.+|+.|+++.+.+.+|.+......+.... .
T Consensus 197 ~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~ 263 (313)
T 3ehe_A 197 NGEQNKSYIYISDCVDAMLFGLRGD--ERVNIFNIGSE-DQIKVKRIAEIVCEELGLSPRFRFTGGDRG----------W 263 (313)
T ss_dssp TSCCEECCEEHHHHHHHHHHHTTCC--SSEEEEECCCS-CCEEHHHHHHHHHHHTTCCCEEEEC----------------
T ss_pred CCCeEEeEEEHHHHHHHHHHHhccC--CCCceEEECCC-CCeeHHHHHHHHHHHhCCCCceEECCCccC----------C
Confidence 9999999999999999999999944 36789999997 799999999999999997643322211000 0
Q ss_pred CCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 335 YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 335 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
........+|++|+ ++|||+|+++++++|+++++||+++.+..
T Consensus 264 ~~~~~~~~~d~~k~-~~lG~~p~~~~~e~l~~~~~~~~~~~~~~ 306 (313)
T 3ehe_A 264 KGDVPVMLLSIEKL-KRLGWKPRYNSEEAVRMAVRDLVEDLDEE 306 (313)
T ss_dssp ------CCBCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHHHHC-
T ss_pred ccccceeccCHHHH-HHcCCCCCCCHHHHHHHHHHHHHhCcccc
Confidence 12233567899999 56999999999999999999999987654
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-48 Score=355.22 Aligned_cols=305 Identities=22% Similarity=0.314 Sum_probs=249.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|||||||||||++|+++|+++ |++|++++|.+....... ..+++++.+|+.|.+ +.+++++ |+|||+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A 70 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIKG-DVVFHFA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence 68999999999999999999999 999999999775543322 257899999999999 8888888 9999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~------------------ 132 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYK------------------ 132 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCC------------------
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCC------------------
Confidence 9776556677888899999999999999999998 899999999999988777777776653
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC-CCeEEecC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR-QPLKLVDG 255 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 255 (390)
|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+.. ..++..++..+..+ .++.+.++
T Consensus 133 ----p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 196 (312)
T 3ko8_A 133 ----PISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR------------HGVIYDFIMKLRRNPNVLEVLGD 196 (312)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCC------------SSHHHHHHHHHHHCTTEEEEC--
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCC------------CChHHHHHHHHHhCCCCeEEcCC
Confidence 56789999999999999999888999999999999999764 13566677777666 56778888
Q ss_pred CcceeeeeeHHHHHHHHHHHHhC---CCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIEN---PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYG 332 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 332 (390)
+.+.++|+|++|+|++++.++++ .. ..+++||++++ +.+|+.|+++.+.+.+|.+......+..... .
T Consensus 197 g~~~~~~i~v~Dva~a~~~~~~~~~~~~-~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------~ 267 (312)
T 3ko8_A 197 GTQRKSYLYVRDAVEATLAAWKKFEEMD-APFLALNVGNV-DAVRVLDIAQIVAEVLGLRPEIRLVPSTPDG-------R 267 (312)
T ss_dssp --CEECEEEHHHHHHHHHHHHHHHHHSC-CSEEEEEESCS-SCEEHHHHHHHHHHHHTCCCEEEEC--------------
T ss_pred CCeEEeeEEHHHHHHHHHHHHHhccccC-CCCcEEEEcCC-CceeHHHHHHHHHHHhCCCCceeecCccccc-------c
Confidence 89999999999999999999987 22 35789999997 7999999999999999976544333221100 0
Q ss_pred CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 333 EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 333 ~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
..........+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 268 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 310 (312)
T 3ko8_A 268 GWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL 310 (312)
T ss_dssp ---CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 0112334567999999999999999999999999999998763
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=358.10 Aligned_cols=323 Identities=16% Similarity=0.266 Sum_probs=254.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
.+|+||||||+||||++|+++|+++ |++|++++|..................+++++.+|++|.+.+.++++ ++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC-CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 3579999999999999999999999 99999999976543322111000012478999999999999999998 79999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
||+|+.........++...++.|+.++.++++++++.+ ++|||+||.++||.....+++|+.+..
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~-------------- 148 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLS-------------- 148 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCB--------------
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCC--------------
Confidence 99999876544556677889999999999999999998 899999999999988777777777653
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcC-ccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc-CCCe
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENG-LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-RQPL 250 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (390)
|.+.|+.+|..+|.+++.++.+.+ ++++++||+++|||+.....+. .+......++..+...... ..++
T Consensus 149 --------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (341)
T 3enk_A 149 --------ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGE-DPAGIPNNLMPYVAQVAVGKLEKL 219 (341)
T ss_dssp --------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCC-CCSSSCSSHHHHHHHHHHTSSSCE
T ss_pred --------CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCC-CcccCccchHHHHHHHHhcCCCce
Confidence 566899999999999999987775 9999999999999975322111 1111123345544443433 3567
Q ss_pred EEec------CCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 251 KLVD------GGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 251 ~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
.++| ++.+.++|+|++|+|++++.+++... ...+++||++++ +.+|+.|+++.+.+.+|.+......+.
T Consensus 220 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~--- 295 (341)
T 3enk_A 220 RVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTG-RGYSVLEVVRAFEKASGRAVPYELVAR--- 295 (341)
T ss_dssp EEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCS-CCEEHHHHHHHHHHHHCSCCCEEEECC---
T ss_pred EEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCC-CceeHHHHHHHHHHHhCCCcceeeCCC---
Confidence 7777 78899999999999999999998621 135789999997 799999999999999997654333221
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.........+|++|++++|||+|+++++++|+++++||+++.+
T Consensus 296 ----------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 296 ----------RPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp ----------CTTCCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred ----------CCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 1123445679999999999999999999999999999998754
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=357.55 Aligned_cols=319 Identities=18% Similarity=0.243 Sum_probs=255.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----hhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+.||+|||||||||||++|++.|+++ |++|++++|.+.. ...+..........+++++.+|+.|.+.+.++++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 56789999999999999999999999 9999999997632 111110000000147899999999999999999999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+.
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~------------ 171 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIG------------ 171 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC------------
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCC------------
Confidence 99999999764333345677889999999999999999988 89999999999998766666666654
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
.|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+... ......++..++..+..+.+
T Consensus 172 ----------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~ 234 (352)
T 1sb8_A 172 ----------KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDP-------NGAYAAVIPKWTSSMIQGDD 234 (352)
T ss_dssp ----------CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCC-------CSTTCCHHHHHHHHHHHTCC
T ss_pred ----------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCC-------CcchhhHHHHHHHHHHCCCC
Confidence 2566899999999999999988889999999999999997641 11122466777788888888
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHh---hcccCCcccCCCcccCC
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY---AKVSGEAALEEPTVDVS 326 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~---g~~~~~~~~~~~~~~~~ 326 (390)
+.+.+++.+.++|+|++|+|++++.++.......+++||++++ +.+|+.|+++.+.+.+ |.+....+.
T Consensus 235 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~-------- 305 (352)
T 1sb8_A 235 VYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVG-GRTSLNQLFFALRDGLAENGVSYHREPV-------- 305 (352)
T ss_dssp CEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHTTCCCCCCCE--------
T ss_pred cEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCC-CCccHHHHHHHHHHHHHhcCCCCCCCce--------
Confidence 8888888999999999999999999998743346789999997 7999999999999999 755432111
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+............+|++|++++|||+|+++++++|+++++||+++.
T Consensus 306 ---~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 351 (352)
T 1sb8_A 306 ---YRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMFL 351 (352)
T ss_dssp ---EECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHHT
T ss_pred ---ecCCCccchhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence 0001112334567899999999999999999999999999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=358.08 Aligned_cols=311 Identities=18% Similarity=0.200 Sum_probs=251.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
...++|+|||||||||||++|++.|+++ |++|++++|.+.. .+++++.+|+.|.+.+.+++.++|+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHTTCSE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHhCCCE
Confidence 3457789999999999999999999999 9999999998643 3788999999999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccc--ccCCCCCCCCCCCCCccccccccC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGK--TIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~--~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|||+|+...... ......+++|+.++.+++++|++.+ ++|||+||.+|||. ....+++|+.+..
T Consensus 81 vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~----------- 147 (347)
T 4id9_A 81 VLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLC----------- 147 (347)
T ss_dssp EEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCC-----------
T ss_pred EEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCC-----------
Confidence 999999775332 2336789999999999999999998 89999999999998 4455666666542
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceec-------------CCCCCCCCCCCCCCCCchhh
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWI-------------GPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~-------------G~~~~~~~~~~~~~~~~~~~ 236 (390)
|.+.|+.+|..+|.+++.++++.+++++++||+.+| ||+.........+......+
T Consensus 148 -----------~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~ 216 (347)
T 4id9_A 148 -----------PNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAA 216 (347)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHH
T ss_pred -----------CCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhH
Confidence 567899999999999999988889999999999999 77532000000000001257
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeee----eeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcc
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTF----IYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~----i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~ 312 (390)
+..++..+..+.++.+.+++...++| +|++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+|.+
T Consensus 217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~ 294 (347)
T 4id9_A 217 IAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGAD-EPADFAALLPKIAALTGLP 294 (347)
T ss_dssp HHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCS-SCEEHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCC-CcccHHHHHHHHHHHhCCC
Confidence 78888889999998999888899999 999999999999999874 35789999997 7999999999999999976
Q ss_pred cCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHH
Q 016370 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 379 (390)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~ 379 (390)
......+. ......+|++|++++|||+|+++++++|+++++||+++..+..
T Consensus 295 ~~~~~~p~----------------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~~ 345 (347)
T 4id9_A 295 IVTVDFPG----------------DGVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAKEQ 345 (347)
T ss_dssp EEEEECSS----------------CCCBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC---
T ss_pred CceeeCCC----------------cccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhhccc
Confidence 54332221 1226679999999999999999999999999999999876654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-47 Score=357.05 Aligned_cols=312 Identities=18% Similarity=0.227 Sum_probs=251.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHh--hCCCeEEEEecCChhh-------hccccccccCCCCCeeEEeCCCCChhHHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILL--ETPHKILALDVYNDKI-------KHLLEPESQTGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~--~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~i~~~~~D~~d~~~~~ 84 (390)
.+.+|+||||||+||||++|++.|++ + |++|++++|..... ..+... ......+++++.+|++|.+.+.
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHP-KAKVVVLDKFRSNTLFSNNRPSSLGHF-KNLIGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCT-TSEEEEEECCCCC-------CCCCCCG-GGGTTCCSEEEECCTTCHHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCC-CCeEEEEECCCccccccccchhhhhhh-hhccccCceEEECCCCCHHHHH
Confidence 46789999999999999999999999 7 99999999976411 000100 0012346799999999999999
Q ss_pred Hh-hccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 85 GL-IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 85 ~~-~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
.+ ..++|+|||+|+.... +..++...+++|+.++.+++++|++.+.+|||+||.++||.... +.+|+.+..
T Consensus 85 ~~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~~~E~~~~~----- 156 (362)
T 3sxp_A 85 RLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-PNVVGKNES----- 156 (362)
T ss_dssp HHTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-SBCTTSCCC-----
T ss_pred HhhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-CCCCCCCCC-----
Confidence 99 7789999999996642 45678889999999999999999999855999999999998765 667766543
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
|.+.|+.+|..+|.+++.++.+ ++++++||+++|||+... ......++..++..
T Consensus 157 -----------------p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~-------~~~~~~~~~~~~~~ 210 (362)
T 3sxp_A 157 -----------------PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFY-------KEKTASMVLQLALG 210 (362)
T ss_dssp -----------------CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGG-------GGGGSCHHHHHHHH
T ss_pred -----------------CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCC-------CCcchhHHHHHHHH
Confidence 6678999999999999998765 899999999999998651 11123578888899
Q ss_pred HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
+..+.++.+++++.+.++|+|++|+|++++.+++.+. .+ +||++++ +.+|+.|+++.+.+.+| .......+.+.
T Consensus 211 ~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~--~g-~~~i~~~-~~~s~~e~~~~i~~~~g-~~~~~~~~~~~- 284 (362)
T 3sxp_A 211 AMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK--SG-VYNVGYS-QARSYNEIVSILKEHLG-DFKVTYIKNPY- 284 (362)
T ss_dssp HHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS--CE-EEEESCS-CEEEHHHHHHHHHHHHC-CCEEECCC----
T ss_pred HHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC--CC-EEEeCCC-CCccHHHHHHHHHHHcC-CCceEECCCCC-
Confidence 9999998888888899999999999999999999863 45 9999997 79999999999999999 44333322210
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
........+|++|+++.|||+|+++++++|+++++||+++.++.
T Consensus 285 -----------~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 328 (362)
T 3sxp_A 285 -----------AFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKGQ 328 (362)
T ss_dssp ---------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC----
T ss_pred -----------cCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhhcc
Confidence 12345678999999999999999999999999999998876544
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=353.36 Aligned_cols=305 Identities=17% Similarity=0.173 Sum_probs=246.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
|+||+|||||||||||++|+++|+++ |+ +.... ...++++.+|+.|.+.+.+++++ +|+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADG-AG------LPGED------------WVFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTT-TC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhc-CC------ccccc------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence 67899999999999999999999998 77 11100 12455567999999999999997 999
Q ss_pred EEEeccccCC-ccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 93 TINLAAICTP-ADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 93 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
|||+|+.... .....++...+++|+.++.+++++|++.+ ++|||+||.++||.....+++|+.+...
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~----------- 133 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG----------- 133 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS-----------
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC-----------
Confidence 9999998642 23456778899999999999999999999 8999999999999877777777653210
Q ss_pred CCcccCCCCCCCc-hhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH----Hh
Q 016370 171 SPCIFGSIEKQRW-SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN----LL 245 (390)
Q Consensus 171 ~~~~~~~~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 245 (390)
...|.+ .|+.+|..+|.+++.++++.+++++++||+.+|||+..+. .....++..++.+ +.
T Consensus 134 -------~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~ 199 (319)
T 4b8w_A 134 -------PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFN-------IEDGHVLPGLIHKVHLAKS 199 (319)
T ss_dssp -------CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCC-------TTTSCHHHHHHHHHHHHHH
T ss_pred -------CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCC-------CccccccHHHHHHHHHHhc
Confidence 012444 5999999999999999888899999999999999987521 1112345555555 78
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
.+.++.+++++.+.++|+|++|+|++++.+++++....+++||++++ +.+|+.|+++.+.+.+|.+......+..
T Consensus 200 ~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~---- 274 (319)
T 4b8w_A 200 SGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEE-DEVSIKEAAEAVVEAMDFHGEVTFDTTK---- 274 (319)
T ss_dssp HTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGG-GCEEHHHHHHHHHHHTTCCSCEEEETTS----
T ss_pred cCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCC-CceeHHHHHHHHHHHhCCCCcEEeCCCC----
Confidence 89999999999999999999999999999999855445789999997 7999999999999999976543322211
Q ss_pred CcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 326 SSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
........+|++|+++.|||.|.++++++|+++++||+++.++
T Consensus 275 ---------~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 317 (319)
T 4b8w_A 275 ---------SDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 317 (319)
T ss_dssp ---------CCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSCSS
T ss_pred ---------CcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1223456799999999999999999999999999999987653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=351.22 Aligned_cols=334 Identities=34% Similarity=0.662 Sum_probs=257.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~~~~d~Vih~ 96 (390)
|+|||||||||||++|+++|++++|++|++++|++.....+.. ..+++++.+|+.| .+.+.++++++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~ 74 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN------HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT------CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc------CCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence 6899999999999999999999757999999998766544322 2579999999998 46788899999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
|+...+..+..++...+++|+.++.+++++|++.+++|||+||.++|+.....+++|+.+... ..
T Consensus 75 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~---------------~~ 139 (345)
T 2bll_A 75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLI---------------VG 139 (345)
T ss_dssp BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCB---------------CC
T ss_pred ccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccc---------------cC
Confidence 997754334456778899999999999999998889999999999999876555666554311 11
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
|...|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+..... .+......++..++..+..+.++.+.+++
T Consensus 140 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 216 (345)
T 2bll_A 140 PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLN---AARIGSSRAITQLILNLVEGSPIKLIDGG 216 (345)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTT---CSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred cccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCccccc---ccccccccHHHHHHHHHHcCCCcEEECCC
Confidence 222366789999999999999998888999999999999999764100 00011234677788888889998888888
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCC-cccHHHHHHHHHHHhhcccCCcccCCCccc--CCcccccC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHN-EVTVRQLAEMMTEVYAKVSGEAALEEPTVD--VSSKEFYG 332 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~-~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~ 332 (390)
.+.++|+|++|+|++++.+++++.. ..+++||++++ + .+|+.|+++.+.+.+|.+......+..... .....+.+
T Consensus 217 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (345)
T 2bll_A 217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP-ENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 295 (345)
T ss_dssp CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT-TSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------
T ss_pred CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCC-CCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhcc
Confidence 8999999999999999999987531 35789999996 5 899999999999999976543333221110 00011111
Q ss_pred CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 333 EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 333 ~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
..+.......+|++|++++|||+|+++++++|+++++||+++.+
T Consensus 296 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 339 (345)
T 2bll_A 296 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (345)
T ss_dssp -----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred ccccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence 11223345678999999999999999999999999999987654
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-46 Score=348.14 Aligned_cols=311 Identities=19% Similarity=0.269 Sum_probs=247.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|.+|+||||||+||||++|+++|++++ +++|++++|... ....+.... ...+++++.+|++|.+.+.+++.++|
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d 77 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLE---DDPRYTFVKGDVADYELVKELVRKVD 77 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTT---TCTTEEEEECCTTCHHHHHHHHHTCS
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhc---cCCceEEEEcCCCCHHHHHHHhhCCC
Confidence 346799999999999999999999993 399999998652 122221110 13578999999999999999998999
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
+|||+|+.........++...+++|+.++.+++++|.+.+ ++|||+||.++||.....+++|+.+..
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~----------- 146 (336)
T 2hun_A 78 GVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLM----------- 146 (336)
T ss_dssp EEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCC-----------
T ss_pred EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCC-----------
Confidence 9999999764333344667889999999999999999876 699999999999987555666665542
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.. ...++..++..+..+.+
T Consensus 147 -----------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~-----------~~~~~~~~~~~~~~~~~ 204 (336)
T 2hun_A 147 -----------PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQF-----------PEKLIPKTIIRASLGLK 204 (336)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCC-----------TTSHHHHHHHHHHTTCC
T ss_pred -----------CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCC-----------cCchHHHHHHHHHcCCC
Confidence 55689999999999999998888999999999999999753 12356777888888888
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
+.+++++.+.++|+|++|+|++++.+++... .+++||++++ +.+|+.|+++.+.+.+|.+......
T Consensus 205 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~~~~~~----------- 270 (336)
T 2hun_A 205 IPIYGTGKNVRDWLYVEDHVRAIELVLLKGE--SREIYNISAG-EEKTNLEVVKIILRLMGKGEELIEL----------- 270 (336)
T ss_dssp EEEETC---CEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCS-CEECHHHHHHHHHHHTTCCSTTEEE-----------
T ss_pred ceEeCCCCceeeeEEHHHHHHHHHHHHhCCC--CCCEEEeCCC-CcccHHHHHHHHHHHhCCCcccccc-----------
Confidence 8888888899999999999999999998653 6789999997 7999999999999999975321111
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
............+|++|++++|||+|+++++++|+++++||+++..
T Consensus 271 -~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 316 (336)
T 2hun_A 271 -VEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNEW 316 (336)
T ss_dssp -ECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHTHH
T ss_pred -cCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 0011122234678999999999999999999999999999988643
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=356.96 Aligned_cols=321 Identities=19% Similarity=0.252 Sum_probs=247.9
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
..++||+|||||||||||++|+++|+++ | ++|++++|.......... ...+++++.+|+.|.+.+.++++++|
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~l~-----~~~~v~~~~~Dl~d~~~l~~~~~~~d 101 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLEL-GVNQVHVVDNLLSAEKINVP-----DHPAVRFSETSITDDALLASLQDEYD 101 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHT-TCSEEEEECCCTTCCGGGSC-----CCTTEEEECSCTTCHHHHHHCCSCCS
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHc-CCceEEEEECCCCCchhhcc-----CCCceEEEECCCCCHHHHHHHhhCCC
Confidence 3467899999999999999999999999 8 999999997654321111 13578999999999999999999999
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeecccccccccCCCCC--CCC---CCCCCcccc
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSFLP--KDS---PLRQDPAYY 164 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~~~~~~~~--e~~---~~~~~~~~~ 164 (390)
+|||+|+......+..++...+++|+.++.+++++|++. + ++|||+||.++||.....+++ |+. |.
T Consensus 102 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~------- 174 (377)
T 2q1s_A 102 YVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSL------- 174 (377)
T ss_dssp EEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCS-------
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccc-------
Confidence 999999976543334567788999999999999999998 7 899999999999986554555 544 22
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCC--CCCCCchhhHHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID--GPSEGVPRVLACFSN 242 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~ 242 (390)
..|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+.....+.+ .+......++..++.
T Consensus 175 --------------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (377)
T 2q1s_A 175 --------------HNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIY 240 (377)
T ss_dssp --------------SCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHH
T ss_pred --------------cCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHH
Confidence 0255689999999999999998878999999999999999761000000 000000246778888
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHH-HHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCC
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~-~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~ 321 (390)
.+..+.++.+++++++.++|+|++|+|++ ++.+++.+. .+ +||++++ +.+|+.|+++.+.+.+|.+......+..
T Consensus 241 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~ 316 (377)
T 2q1s_A 241 KALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASG-KETSIADLATKINEITGNNTELDRLPKR 316 (377)
T ss_dssp HHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCC-CCEEHHHHHHHHHHHHTCCSCCCCCCCC
T ss_pred HHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCC-CceeHHHHHHHHHHHhCCCCCceeCCCC
Confidence 88889888888888899999999999999 999999864 45 9999997 7999999999999999976543332210
Q ss_pred cccCCcccccCCCCCCCC-CCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 322 TVDVSSKEFYGEGYDDSD-KRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
..... ...+|++|++++|||+|+++++++|+++++||+++...
T Consensus 317 -------------~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 360 (377)
T 2q1s_A 317 -------------PWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLAV 360 (377)
T ss_dssp -------------GGGCC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHTHHH
T ss_pred -------------ccccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 01223 57799999999999999999999999999999987654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=348.02 Aligned_cols=312 Identities=19% Similarity=0.323 Sum_probs=247.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vi 94 (390)
||+||||||+||||++|+++|+++ |++|++++|......... ..+++++.+|+.|.+.+.++++ ++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE-GLSVVVVDNLQTGHEDAI-------TEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGS-------CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCcCchhhc-------CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 589999999999999999999999 999999998764322111 2378999999999999999998 899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
|+|+......+..++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~--------------- 137 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTN--------------- 137 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCC---------------
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCC---------------
Confidence 9999765333345677889999999999999999998 899999999999987666777766542
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCC-CCchhhHHHHHHHHhc-CCCeE
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPS-EGVPRVLACFSNNLLR-RQPLK 251 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 251 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.....+ +. .....++..++..... +.++.
T Consensus 138 -------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (330)
T 2c20_A 138 -------PTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIG---EDHRPETHLIPLVLQVALGQREKIM 207 (330)
T ss_dssp -------CSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSC---CCCSSCCSHHHHHHHHHTTSSSCEE
T ss_pred -------CCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccc---cccccccchHHHHHHHHhhcCCCeE
Confidence 556899999999999999988889999999999999997431111 11 1122455555555543 34677
Q ss_pred Eec------CCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc
Q 016370 252 LVD------GGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324 (390)
Q Consensus 252 ~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~ 324 (390)
++| ++++.++|+|++|+|++++.+++++.. ..+++||++++ +.+|+.|+++.+.+.+|.+......+.
T Consensus 208 ~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~---- 282 (330)
T 2c20_A 208 MFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNG-NGFSVKEIVDAVREVTNHEIPAEVAPR---- 282 (330)
T ss_dssp EECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCT-TCBCHHHHHHHHHHHTTSCCCEEEECC----
T ss_pred EeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCC-CCccHHHHHHHHHHHhCCCCceeeCCC----
Confidence 776 677899999999999999999986431 13689999997 799999999999999987543322211
Q ss_pred CCcccccCCCCCCCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHHHHHHhH
Q 016370 325 VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLTYQHRTY 375 (390)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~~~~~~ 375 (390)
.........+|++|++++|||+|++ +++++|+++++|++++.
T Consensus 283 ---------~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~ 325 (330)
T 2c20_A 283 ---------RAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQP 325 (330)
T ss_dssp ---------CSSCCSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred ---------CCCcccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhh
Confidence 1122345678999999999999999 99999999999998765
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=345.32 Aligned_cols=301 Identities=19% Similarity=0.280 Sum_probs=246.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
.++|+||||||+||||++|+++|+++ |++|++++|.+.. .. -+++++.+|++|.+.+.+++++ +|+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~-~~----------l~~~~~~~Dl~d~~~~~~~~~~~~~d~ 77 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQ-NVEVFGTSRNNEA-KL----------PNVEMISLDIMDSQRVKKVISDIKPDY 77 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCTTC-CC----------TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCcc-cc----------ceeeEEECCCCCHHHHHHHHHhcCCCE
Confidence 46789999999999999999999999 9999999998653 11 1688999999999999999987 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeecccccccc--cCCCCCCCCCCCCCcccccccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKT--IGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy~~~--~~~~~~e~~~~~~~~~~~~~~e 168 (390)
|||+|+.........++...+++|+.++.+++++|++. + ++|||+||.++|+.. ...+++|+.+..
T Consensus 78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~---------- 147 (321)
T 2pk3_A 78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR---------- 147 (321)
T ss_dssp EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB----------
T ss_pred EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC----------
Confidence 99999987544445577889999999999999999876 4 899999999999976 455666766542
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc--
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-- 246 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 246 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+... ..++..++..+..
T Consensus 148 ------------~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-----------~~~~~~~~~~~~~~~ 204 (321)
T 2pk3_A 148 ------------PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL-----------GFVTQDFAKQIVDIE 204 (321)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT-----------TSHHHHHHHHHHHHH
T ss_pred ------------CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC-----------CchHHHHHHHHHHHh
Confidence 556899999999999999988889999999999999998651 1345556666555
Q ss_pred -C--CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 247 -R--QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 247 -~--~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
+ .++.+.+++.+.++|+|++|+|++++.+++.+ ..+++||++++ +.+|+.|+++.+.+.+|.+......+..
T Consensus 205 ~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~-- 279 (321)
T 2pk3_A 205 MEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG--KTGDVYNVCSG-IGTRIQDVLDLLLAMANVKIDTELNPLQ-- 279 (321)
T ss_dssp TTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEESCS-CEEEHHHHHHHHHHHSSSCCEEEECGGG--
T ss_pred cCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC--CCCCeEEeCCC-CCeeHHHHHHHHHHHhCCCCceeecccc--
Confidence 6 57778888888999999999999999999876 35789999997 7999999999999999875433222110
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
..........+|++|+++.|||+|+++++++|+++++||+++
T Consensus 280 ---------~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 280 ---------LRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQA 321 (321)
T ss_dssp ---------CCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred ---------CCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence 001223457899999999999999999999999999999753
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=343.52 Aligned_cols=308 Identities=21% Similarity=0.312 Sum_probs=249.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh-C-C---CeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE-T-P---HKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~-~-g---~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
|+|||||||||||++|+++|+++ + | ++|++++|.... ...+.... ...+++++.+|++|.+.+.+++.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDAGLLARELRGV 77 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCHHHHHHHhcCC
Confidence 68999999999999999999985 3 6 899999986521 11111110 1257899999999999999999999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|||+|+......+..++...+++|+.++.+++++|.+.+ ++|||+||.++||.....+++|+.+..
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~----------- 146 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLE----------- 146 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCC-----------
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCC-----------
Confidence 99999999765333334667889999999999999999998 899999999999986555666665542
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.. ...++..++..+..+.+
T Consensus 147 -----------~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~-----------~~~~~~~~~~~~~~~~~ 204 (337)
T 1r6d_A 147 -----------PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQH-----------PEKLIPLFVTNLLDGGT 204 (337)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC-----------TTSHHHHHHHHHHTTCC
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCC-----------CCChHHHHHHHHhcCCC
Confidence 55689999999999999998888999999999999999754 12366777888888888
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
+.+++++.+.++|+|++|+|++++.+++++. .+++||++++ +.+|+.|+++.+.+.+|.+......
T Consensus 205 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~~~~~~----------- 270 (337)
T 1r6d_A 205 LPLYGDGANVREWVHTDDHCRGIALVLAGGR--AGEIYHIGGG-LELTNRELTGILLDSLGADWSSVRK----------- 270 (337)
T ss_dssp EEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCC-CEEEHHHHHHHHHHHHTCCGGGEEE-----------
T ss_pred cEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC--CCCEEEeCCC-CCccHHHHHHHHHHHhCCCccccee-----------
Confidence 8888888899999999999999999998753 5789999997 7999999999999999975321110
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
..........+.+|++|++++|||+|+++++++|+++++||+++..
T Consensus 271 -~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 316 (337)
T 1r6d_A 271 -VADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRG 316 (337)
T ss_dssp -ECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred -cCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhchh
Confidence 0001112234568999999999999999999999999999987643
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=343.21 Aligned_cols=300 Identities=22% Similarity=0.359 Sum_probs=245.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih 95 (390)
|+||||||+||||++|+++|+++ |++|++++|......... ..+++++.+|++|.+.+.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR-GLEVAVLDNLATGKRENV-------PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEECCCSSCCGGGS-------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCCcCchhhc-------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999999 999999998543221111 1467889999999999999998 6999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecc-ccccc-ccCCCCCCCCCCCCCccccccccCCCC
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC-EVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~-~vy~~-~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
+|+.........++...+++|+.++.+++++|++.+ ++|||+||. ++||. ....+.+|+.+.
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~--------------- 137 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPP--------------- 137 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCC---------------
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCC---------------
Confidence 999765333345677889999999999999999988 899999999 99986 444455565543
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
.|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+... .....++..++.++..+.++.+
T Consensus 138 -------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 202 (311)
T 2p5y_A 138 -------RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDP--------HGEAGVVAIFAERVLKGLPVTL 202 (311)
T ss_dssp -------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCS--------SSTTHHHHHHHHHHHHTCCEEE
T ss_pred -------CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCC--------CCcCcHHHHHHHHHHcCCCcEE
Confidence 2556899999999999999988889999999999999997641 1113467777888888888888
Q ss_pred e-----cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc
Q 016370 253 V-----DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS 327 (390)
Q Consensus 253 ~-----~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~ 327 (390)
+ +++.+.++|+|++|+|++++.+++.+ +++||++++ +.+|+.|+++.+.+.+|.+......+..
T Consensus 203 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~------ 271 (311)
T 2p5y_A 203 YARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNVGTG-EGHTTREVLMAVAEAAGKAPEVQPAPPR------ 271 (311)
T ss_dssp ECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEESCS-CCEEHHHHHHHHHHHHTCCCCEEEECCC------
T ss_pred EecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEeCCC-CCccHHHHHHHHHHHhCCCCCceeCCCC------
Confidence 7 88888999999999999999999863 689999997 7999999999999999975433222211
Q ss_pred ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 328 KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 328 ~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
........+|++|+++ |||+|+++++++|+++++||+++
T Consensus 272 -------~~~~~~~~~d~~k~~~-lg~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 272 -------PGDLERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp -------TTCCSBCCBCCHHHHT-TTCCCSSCHHHHHHHHHHHHHTC
T ss_pred -------ccchhhccCCHHHHHH-CCCCCCCCHHHHHHHHHHHHHhh
Confidence 1223456799999998 99999999999999999999753
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=345.11 Aligned_cols=308 Identities=20% Similarity=0.259 Sum_probs=247.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
||+||||||+||||++|+++|++++ |++|++++|.... ...+... ...+++++.+|++|.+.+.++++++|+|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 79 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADAELVDKLAAKADAI 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence 5899999999999999999999984 6999999996531 1111111 1257899999999999999999999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccC------------CCCCCCCCCCCCc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG------------SFLPKDSPLRQDP 161 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~------------~~~~e~~~~~~~~ 161 (390)
||+|+......+..++...+++|+.++.+++++|.+.+.+|||+||.++||.... .+++|+.+.
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~---- 155 (348)
T 1oc2_A 80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY---- 155 (348)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC----
T ss_pred EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCCCCC----
Confidence 9999976533334466788999999999999999987779999999999987532 233333332
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
.|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.. ...++..++
T Consensus 156 ------------------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~-----------~~~~~~~~~ 206 (348)
T 1oc2_A 156 ------------------NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH-----------IEKFIPRQI 206 (348)
T ss_dssp ------------------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC-----------TTSHHHHHH
T ss_pred ------------------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCC-----------ccchHHHHH
Confidence 256789999999999999998888999999999999999764 123567777
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCC
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~ 321 (390)
..+..+.++.+++++.+.++|+|++|+|++++.+++.+ ..+++||++++ +.+|+.|+++.+.+.+|.+.......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~-- 281 (348)
T 1oc2_A 207 TNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG--RMGETYLIGAD-GEKNNKEVLELILEKMGQPKDAYDHV-- 281 (348)
T ss_dssp HHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC--CTTCEEEECCS-CEEEHHHHHHHHHHHTTCCTTCSEEE--
T ss_pred HHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC--CCCCeEEeCCC-CCCCHHHHHHHHHHHhCCCccccccC--
Confidence 88888888888888889999999999999999999865 36789999997 79999999999999999754311110
Q ss_pred cccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccC-HHHHHHHHHHHHHHhHh
Q 016370 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTS-LWDLLESTLTYQHRTYA 376 (390)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~-~~~~l~~~~~~~~~~~~ 376 (390)
...........+|++|+++.|||+|+++ ++++|+++++|++++..
T Consensus 282 ----------~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 327 (348)
T 1oc2_A 282 ----------TDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD 327 (348)
T ss_dssp ----------CCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTHH
T ss_pred ----------CCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHhhh
Confidence 0111122345789999999999999998 99999999999987643
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=349.23 Aligned_cols=310 Identities=21% Similarity=0.293 Sum_probs=250.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.||+|||||||||||++|+++|+++ |++|++++|.+....... ..+++++.+|+.|.+.+.++++++|+|||
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-------~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih 99 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTED-------MFCDEFHLVDLRVMENCLKVTEGVDHVFN 99 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGG-------GTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhc-------cCCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence 5789999999999999999999999 999999999865432211 24789999999999999999999999999
Q ss_pred eccccCCccc-cCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC-----CCCCCCCCCCCCcccccccc
Q 016370 96 LAAICTPADY-NTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG-----SFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 96 ~a~~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-----~~~~e~~~~~~~~~~~~~~e 168 (390)
+|+......+ ..++...+++|+.++.+++++|++.+ ++|||+||.++|+.... .+++|+.+.
T Consensus 100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~----------- 168 (379)
T 2c5a_A 100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----------- 168 (379)
T ss_dssp CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-----------
T ss_pred CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC-----------
Confidence 9997653222 45677889999999999999999988 89999999999987532 112222210
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
...|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+... ......++..++..+..+.
T Consensus 169 ---------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~ 232 (379)
T 2c5a_A 169 ---------PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTW-------KGGREKAPAAFCRKAQTST 232 (379)
T ss_dssp ---------SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCC-------SSSCCCHHHHHHHHHHHCS
T ss_pred ---------CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCc-------ccccccHHHHHHHHHHhCC
Confidence 113567899999999999999988889999999999999997641 1111235677777777777
Q ss_pred C-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc
Q 016370 249 P-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS 327 (390)
Q Consensus 249 ~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~ 327 (390)
+ +.+++++.+.++|+|++|+|++++.+++++ .+++||++++ +.+|+.|+++.+.+.+|.+......+.+.
T Consensus 233 ~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~---~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~~----- 303 (379)
T 2c5a_A 233 DRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIPGPE----- 303 (379)
T ss_dssp SCEEEESCSCCEECCEEHHHHHHHHHHHHHSS---CCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEECCCC-----
T ss_pred CceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc---CCCeEEeCCC-CccCHHHHHHHHHHHhCCCCceeeCCCCC-----
Confidence 6 888888889999999999999999999875 4679999997 79999999999999999764433322211
Q ss_pred ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 328 KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 328 ~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
......+|++|+++.|||+|+++++++|+++++||+++....
T Consensus 304 ---------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 345 (379)
T 2c5a_A 304 ---------GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKE 345 (379)
T ss_dssp ---------CCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CcccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhHhhh
Confidence 123456899999999999999999999999999999876543
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=342.62 Aligned_cols=315 Identities=18% Similarity=0.178 Sum_probs=249.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
-.+|+||||||+||||++|++.|+++ |++|++++|++.... .+... ....+++++.+|+.|.+.+.+++++ +
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKAQP 87 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHcCC
Confidence 45689999999999999999999999 999999999765321 11100 0124789999999999999999986 6
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
|+|||+|+......+..++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 88 d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~---------- 157 (335)
T 1rpn_A 88 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY---------- 157 (335)
T ss_dssp SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC----------
T ss_pred CEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCC----------
Confidence 99999999765433456778889999999999999999876 799999999999987666677766543
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
|.+.|+.+|..+|.+++.++++++++++++||+.+|||+... ......+..++..+..+.
T Consensus 158 ------------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--------~~~~~~~~~~~~~~~~g~ 217 (335)
T 1rpn_A 158 ------------PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI--------EFVTRKVTDAVARIKLGK 217 (335)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHTTS
T ss_pred ------------CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCC--------CcchHHHHHHHHHHHcCC
Confidence 556899999999999999988889999999999999997541 122344666677777776
Q ss_pred -CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCC-cccCCCcccCC
Q 016370 249 -PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE-AALEEPTVDVS 326 (390)
Q Consensus 249 -~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~-~~~~~~~~~~~ 326 (390)
+....+++++.++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+... .....
T Consensus 218 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~------ 287 (335)
T 1rpn_A 218 QQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK---ADDYVVATG-VTTTVRDMCQIAFEHVGLDYRDFLKIDP------ 287 (335)
T ss_dssp CSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS---CCCEEECCS-CEEEHHHHHHHHHHTTTCCGGGTEEECG------
T ss_pred CceEEeCCCcceeceEEHHHHHHHHHHHHhcCC---CCEEEEeCC-CCccHHHHHHHHHHHhCCCccccccccc------
Confidence 34456888899999999999999999999863 479999997 7999999999999999875321 11100
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
.. ..........+|++|++++|||+|+++++++|+++++|++++.++
T Consensus 288 --~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 334 (335)
T 1rpn_A 288 --AF--FRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSR 334 (335)
T ss_dssp --GG--CCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred --cc--cCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 00 011223456789999999999999999999999999999987754
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=342.99 Aligned_cols=314 Identities=26% Similarity=0.414 Sum_probs=247.8
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
..+++|+|||||||||||++|+++|+++ |++|++++|...... .+.... ...+++++.+|+.+.. +.++|
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~-----~~~~d 93 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWI---GHENFELINHDVVEPL-----YIEVD 93 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGT---TCTTEEEEECCTTSCC-----CCCCS
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHC-CCEEEEEeCCCccchhhhhhhc---cCCceEEEeCccCChh-----hcCCC
Confidence 4567899999999999999999999999 999999998653221 111110 1247899999998863 56799
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
+|||+|+......+..++...+++|+.++.+++++|++.+.+|||+||.++|+.....+++|+......
T Consensus 94 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~----------- 162 (343)
T 2b69_A 94 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVN----------- 162 (343)
T ss_dssp EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCC-----------
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCC-----------
Confidence 999999977544445677788999999999999999988889999999999998765566665322110
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
...|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+... . ...++..++..+..+.++.
T Consensus 163 ------~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~-------~--~~~~~~~~~~~~~~~~~~~ 227 (343)
T 2b69_A 163 ------PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM-------N--DGRVVSNFILQALQGEPLT 227 (343)
T ss_dssp ------SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCT-------T--CCCHHHHHHHHHHHTCCEE
T ss_pred ------CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCC-------C--cccHHHHHHHHHHcCCCce
Confidence 113567899999999999999888889999999999999997541 0 1246677788888888988
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
+.+++.+.++|+|++|+|++++.+++.+ .+++||++++ +.+|+.|+++.+.+.+|.+......+...
T Consensus 228 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~~--------- 294 (343)
T 2b69_A 228 VYGSGSQTRAFQYVSDLVNGLVALMNSN---VSSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLSEAQ--------- 294 (343)
T ss_dssp EESSSCCEEECEEHHHHHHHHHHHHTSS---CCSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEECCCT---------
T ss_pred EcCCCCeEEeeEeHHHHHHHHHHHHhcC---CCCeEEecCC-CCCcHHHHHHHHHHHhCCCCCceeCCCCC---------
Confidence 8888889999999999999999999865 3679999997 79999999999999999765433322111
Q ss_pred CCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 332 GEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 332 ~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
.......+|++|++++|||+|+++++++|+++++||+++..+.
T Consensus 295 ----~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 337 (343)
T 2b69_A 295 ----DDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQ 337 (343)
T ss_dssp ----TCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1223567899999999999999999999999999999876443
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=347.67 Aligned_cols=302 Identities=22% Similarity=0.317 Sum_probs=246.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----hhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+.+|+|||||||||||++|+++|+++ |++|++++|.+.. ...+.... ...+++++.+|+. ++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~----------~~ 70 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVAS-GEEVTVLDDLRVPPMIPPEGTGKFL---EKPVLELEERDLS----------DV 70 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSSCCSSCCTTSSEEE---CSCGGGCCHHHHT----------TE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCcccccchhhhhhhc---cCCCeeEEeCccc----------cC
Confidence 45789999999999999999999999 9999999997752 11111100 1235556666655 79
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|||+|+.........++...++ |+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~----------- 138 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLS----------- 138 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCC-----------
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCC-----------
Confidence 999999998765445566777788 9999999999999999 999999999999998777788877653
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCc-cEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL-EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
|.+.|+.+|..+|.+++.+++++++ +++++||+.+|||+... ..++..++..+..+.
T Consensus 139 -----------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~~~~ 196 (321)
T 3vps_A 139 -----------PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-----------DALVPRLCANLLTRN 196 (321)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-----------TSHHHHHHHHHHHHS
T ss_pred -----------CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-----------CChHHHHHHHHHcCC
Confidence 5678999999999999999988899 99999999999998651 346788888888999
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
++.+.+++...++|+|++|+|++++.+++++. .+ +||++++ +.+|+.|+++.+. .+|.+......+..
T Consensus 197 ~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~--~g-~~~i~~~-~~~s~~e~~~~i~-~~g~~~~~~~~~~~------- 264 (321)
T 3vps_A 197 ELPVEGDGEQRRDFTYITDVVDKLVALANRPL--PS-VVNFGSG-QSLSVNDVIRILQ-ATSPAAEVARKQPR------- 264 (321)
T ss_dssp EEEEETTSCCEECEEEHHHHHHHHHHGGGSCC--CS-EEEESCS-CCEEHHHHHHHHH-TTCTTCEEEEECCC-------
T ss_pred CeEEeCCCCceEceEEHHHHHHHHHHHHhcCC--CC-eEEecCC-CcccHHHHHHHHH-HhCCCCccccCCCC-------
Confidence 99999999999999999999999999999875 35 9999997 7999999999999 99976544332221
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCccc-ccCHHHHHHHHHHHHHHhHhHHHHHH
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNP-KTSLWDLLESTLTYQHRTYAEAIKQA 382 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p-~~~~~~~l~~~~~~~~~~~~~~~~~~ 382 (390)
........+|++|+++.|||+| +++++++|+++++||+++.....++.
T Consensus 265 ------~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~ 313 (321)
T 3vps_A 265 ------PNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLDDIRQR 313 (321)
T ss_dssp ------TTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCTTC----
T ss_pred ------CCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCCchhcCc
Confidence 1234567899999999999999 88999999999999998765555443
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=344.76 Aligned_cols=320 Identities=19% Similarity=0.297 Sum_probs=246.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh------h-hccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK------I-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~------~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
+|+||||||+||||++|+++|+++ |++|++++|.... . ..+..... ....+++++.+|++|.+.+.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQE-LTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT-TCCEEEEECSSSSCBCSSSSBHHHHHHHH-HHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCcccccccccHHHHHHHHh-ccCCceEEEECCCCCHHHHHHHHHh
Confidence 479999999999999999999999 9999999986432 1 11100000 002478999999999999999998
Q ss_pred -cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 89 -MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
++|+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~-------- 151 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTG-------- 151 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCC--------
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCC--------
Confidence 7999999999765333445677889999999999999999988 899999999999987666677766542
Q ss_pred ccCCCCcccCCCCCC-CchhHHHHHHHHHHHHHHhhh-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 016370 167 KEDASPCIFGSIEKQ-RWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
| .+.|+.+|..+|.+++.++++ .+++++++||+++|||+.....+. .+......++..++..+
T Consensus 152 --------------p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~-~~~~~~~~~~~~~~~~~ 216 (348)
T 1ek6_A 152 --------------GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGE-DPQGIPNNLMPYVSQVA 216 (348)
T ss_dssp --------------CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCC-CCSSSCCSHHHHHHHHH
T ss_pred --------------CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCc-CcccchhhHHHHHHHHH
Confidence 3 568999999999999998766 239999999999999964211110 00001134666666666
Q ss_pred h-cCCCeEEec------CCcceeeeeeHHHHHHHHHHHHhCCCCCCC-ceEEecCCCCcccHHHHHHHHHHHhhcccCCc
Q 016370 245 L-RRQPLKLVD------GGQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316 (390)
Q Consensus 245 ~-~~~~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~-~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~ 316 (390)
. .+.++.++| ++.+.++|+|++|+|++++.+++++....+ ++||++++ +.+|+.|+++.+.+.+|.+....
T Consensus 217 ~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~ 295 (348)
T 1ek6_A 217 IGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-TGYSVLQMVQAMEKASGKKIPYK 295 (348)
T ss_dssp HTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-CCEEHHHHHHHHHHHHCSCCCEE
T ss_pred HhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCC-CCccHHHHHHHHHHHhCCCCcee
Confidence 6 677788876 577899999999999999999986421234 89999997 79999999999999999754322
Q ss_pred ccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
..+. .........+|++|++++|||+|+++++++|+++++||+++.
T Consensus 296 ~~~~-------------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 341 (348)
T 1ek6_A 296 VVAR-------------REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP 341 (348)
T ss_dssp EECC-------------CTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred eCCC-------------CCccchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence 2111 112234567999999999999999999999999999998764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=346.13 Aligned_cols=327 Identities=17% Similarity=0.220 Sum_probs=244.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
||+|||||||||||++|+++|+++ |++|++++|... ... ...... ...+++++.+|++|.+.+.+++++ +|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNKNDVTRLITKYMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC-CCEEEEEeCCCccCchhhhhhhc---cCCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence 579999999999999999999998 999999998531 111 111100 013688999999999999999998 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C-cEEEeecccccccccCCCCCCCCCCCCC-ccccccccC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-RLIHFSTCEVYGKTIGSFLPKDSPLRQD-PAYYVLKED 169 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~e~~~~~~~-~~~~~~~e~ 169 (390)
|||+|+.........++...+++|+.++.+++++|++.+ + +|||+||.++|+.....+..|+.....+ .......|+
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~ 156 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES 156 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence 999999764333344677889999999999999999988 4 8999999999997654333222110000 000011111
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC-
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ- 248 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (390)
. ...|.+.|+.+|..+|.+++.++.+++++++++||+.+|||+... .....++..++..+..+.
T Consensus 157 ~-------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~ 221 (347)
T 1orr_A 157 T-------QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFA--------TYDQGWVGWFCQKAVEIKN 221 (347)
T ss_dssp S-------CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCC--------BTTBCHHHHHHHHHHHHHT
T ss_pred C-------CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCC--------CCcCcHHHHHHHHHHhCcc
Confidence 1 113667899999999999999988889999999999999997541 001235566666666555
Q ss_pred ----CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCC--cccHHHHHHHHHHHhhcccCCcccCCCc
Q 016370 249 ----PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHN--EVTVRQLAEMMTEVYAKVSGEAALEEPT 322 (390)
Q Consensus 249 ----~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~--~~s~~~l~~~i~~~~g~~~~~~~~~~~~ 322 (390)
++.+.+++.+.++|+|++|+|++++.+++......+++||++++ + .+|+.|+++.+.+.+|.+......+.
T Consensus 222 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~-~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-- 298 (347)
T 1orr_A 222 GINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-IVNSLSLLELFKLLEDYCNIDMRFTNLPV-- 298 (347)
T ss_dssp TCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSC-GGGEEEHHHHHHHHHHHHTCCCCEEEECC--
T ss_pred cCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCC-CCCCccHHHHHHHHHHHhCCCCCceeCCC--
Confidence 78888889999999999999999999998622235789999996 5 49999999999999997644332221
Q ss_pred ccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.........+|++|+++.|||+|+++++++|+++++|++++.+
T Consensus 299 -----------~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 299 -----------RESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp -----------CSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred -----------CCCCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence 1122334678999999999999999999999999999998754
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=341.47 Aligned_cols=314 Identities=19% Similarity=0.329 Sum_probs=248.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
||||||||+||||++|+++|++++|++|++++|... ....+.... ...+++++.+|++|.+.+.++++ ++|+|
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS---ESNRYNFEHADICDSAEITRIFEQYQPDAV 77 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT---TCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhh---cCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence 589999999999999999999975799999998652 222221110 13478999999999999999998 79999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC--C-C-------cEEEeecccccccccC--C--------CCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN--N-K-------RLIHFSTCEVYGKTIG--S--------FLPK 153 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~-~-------~~v~~Ss~~vy~~~~~--~--------~~~e 153 (390)
||+|+......+..++...+++|+.++.+++++|.+. + + +|||+||.++||.... . +++|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E 157 (361)
T 1kew_A 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence 9999976533334567788999999999999999987 6 6 9999999999987531 1 3333
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+.+. .|.+.|+.+|..+|.+++.++++++++++++||+.+|||+.. .
T Consensus 158 ~~~~----------------------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~-----------~ 204 (361)
T 1kew_A 158 TTAY----------------------APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF-----------P 204 (361)
T ss_dssp TSCC----------------------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC-----------T
T ss_pred CCCC----------------------CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCC-----------c
Confidence 3332 356789999999999999998888999999999999999754 1
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhccc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~ 313 (390)
..++..++..+..+.++.+++++.+.++|+|++|+|++++.+++.. ..+++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 281 (361)
T 1kew_A 205 EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG--KAGETYNIGGH-NEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCC-CEEEHHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC--CCCCEEEecCC-CeeeHHHHHHHHHHHhCCcC
Confidence 2356777788888888888888889999999999999999999875 36789999997 79999999999999999764
Q ss_pred CCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
.... + ... ...+............+|++|++++|||+|+++++++|+++++||+++.
T Consensus 282 ~~~~-p--~~~--~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 338 (361)
T 1kew_A 282 PKAT-S--YRE--QITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANT 338 (361)
T ss_dssp CCSS-C--GGG--GEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCH
T ss_pred cccc-c--ccc--ceeecCCCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhcc
Confidence 3221 1 000 0011111112234567999999999999999999999999999998763
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=340.76 Aligned_cols=302 Identities=21% Similarity=0.275 Sum_probs=239.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~ 92 (390)
|.+|+||||||+||||++|+++|+++ |++|++++|+. .+|+.|.+.+.++++ ++|+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~-g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~ 58 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQR-GDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQ 58 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC-TTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCE
Confidence 34689999999999999999999998 99999988752 379999999999999 8999
Q ss_pred EEEeccccCC-ccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 93 TINLAAICTP-ADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 93 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
|||+|+.... ..+..++...+++|+.++.+++++|++.+ ++|||+||..+|+.....+++|+.+...
T Consensus 59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~----------- 127 (321)
T 1e6u_A 59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQG----------- 127 (321)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSS-----------
T ss_pred EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccC-----------
Confidence 9999997642 12345677889999999999999999998 8999999999999866556666543210
Q ss_pred CCcccCCCCCC-CchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc---
Q 016370 171 SPCIFGSIEKQ-RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR--- 246 (390)
Q Consensus 171 ~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 246 (390)
...| .+.|+.+|..+|.+++.++++.+++++++||+.+|||+..+. .....++..++..+..
T Consensus 128 -------~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~ 193 (321)
T 1e6u_A 128 -------TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFH-------PSNSHVIPALLRRFHEATA 193 (321)
T ss_dssp -------CCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCC-------TTCSSHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCC-------CCCCccHHHHHHHHHHhhh
Confidence 0123 358999999999999999888899999999999999976521 1112356666666543
Q ss_pred -C-CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCC-------CCceEEecCCCCcccHHHHHHHHHHHhhcccCCcc
Q 016370 247 -R-QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-------NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317 (390)
Q Consensus 247 -~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~-------~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~ 317 (390)
| .++.+.+++.+.++|+|++|+|++++.+++++... .+++||++++ +.+|+.|+++.+.+.+|.+.....
T Consensus 194 ~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~ 272 (321)
T 1e6u_A 194 QKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG-VDCTIRELAQTIAKVVGYKGRVVF 272 (321)
T ss_dssp HTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS-CCEEHHHHHHHHHHHHTCCSEEEE
T ss_pred cCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCC-CCccHHHHHHHHHHHhCCCCceEe
Confidence 3 67778888899999999999999999999986421 2589999997 799999999999999997543322
Q ss_pred cCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
.+.. ........+|++|+++ |||+|+++++++|+++++||+++.+.+
T Consensus 273 ~~~~-------------~~~~~~~~~d~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~~~~ 319 (321)
T 1e6u_A 273 DASK-------------PDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRF 319 (321)
T ss_dssp ETTS-------------CCCCSBCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC---
T ss_pred CCCC-------------CCCcccccCCHHHHHh-cCCccCCcHHHHHHHHHHHHHHHHHhh
Confidence 2110 1123456799999998 999999999999999999999887644
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=343.50 Aligned_cols=315 Identities=16% Similarity=0.186 Sum_probs=247.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
|.+|+||||||+||||++|+++|+++ |++|++++|++.....+..... ...+++++.+|+.|.+.+.+++++ +|+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREFQPEI 83 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence 56789999999999999999999999 9999999998754332221100 135789999999999999999987 899
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccC-CCCCCCCCCCCCccccccccC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~-~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|||+|+......+..++...+++|+.++.+++++|.+.+ ++|||+||.++||.... .+..|+.+.
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~------------ 151 (357)
T 1rkx_A 84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM------------ 151 (357)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB------------
T ss_pred EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC------------
Confidence 999999654333345677889999999999999998875 79999999999997643 244444433
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---------CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---------GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---------~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
.|.+.|+.+|..+|.+++.++.++ +++++++||+.+|||+... ...++..+
T Consensus 152 ----------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~----------~~~~~~~~ 211 (357)
T 1rkx_A 152 ----------GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA----------LDRIVPDI 211 (357)
T ss_dssp ----------CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC----------SSCHHHHH
T ss_pred ----------CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc----------cccHHHHH
Confidence 255689999999999999987654 8999999999999997531 12477888
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC---CCCCCCceEEecCC-CCcccHHHHHHHHHHHhhcccCCc
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN---PARANGHIFNVGNP-HNEVTVRQLAEMMTEVYAKVSGEA 316 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~~~nv~~~-~~~~s~~~l~~~i~~~~g~~~~~~ 316 (390)
+..+..+.++.+. ++.+.++|+|++|+|++++.+++. .....+++||++++ ++.+|+.|+++.+.+.+|.+....
T Consensus 212 ~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~ 290 (357)
T 1rkx_A 212 LRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ 290 (357)
T ss_dssp HHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccc
Confidence 8888888887765 567899999999999999999874 11135689999974 268999999999999999754332
Q ss_pred ccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
..+.. .........+|++|++++|||+|+++++++|+++++||+++...
T Consensus 291 ~~~~~------------~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 339 (357)
T 1rkx_A 291 LDGNA------------HPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSG 339 (357)
T ss_dssp C-------------------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCC------------CCcCcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 21100 01223456799999999999999999999999999999886653
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=336.82 Aligned_cols=321 Identities=19% Similarity=0.316 Sum_probs=239.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+||||||+||||++|+++|+++ |++|++++|..................+++++.+|++|.+.+.+++++ +|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 58999999999999999999999 999999987532211100000000023678899999999999999874 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
+||.........++...+++|+.++.++++++++.+ ++|||+||.++|+.....+++|+.+..+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~--------------- 144 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGT--------------- 144 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC---------------
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCC---------------
Confidence 999764333344567788999999999999999888 8999999999998765556666554321
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-cCCCeEE
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-RRQPLKL 252 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 252 (390)
+.+.|+.+|..+|.+++.++.+. +++++++||+++|||+.....+. .+......++..+..... .+.++.+
T Consensus 145 ------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (338)
T 1udb_A 145 ------PQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGE-DPQGIPNNLMPYIAQVAVGRRDSLAI 217 (338)
T ss_dssp ------CSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCC-CCCSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred ------CCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCccccccc-ccccchhhHHHHHHHHHHhcCCCcEE
Confidence 25689999999999999988776 89999999999999964211110 011112335555555544 4556666
Q ss_pred ec------CCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 253 VD------GGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 253 ~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
.+ ++.+.++|||++|+|++++.++++.. ...+++||++++ +.+|+.|+++.+.+.+|.+......+.
T Consensus 218 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~----- 291 (338)
T 1udb_A 218 FGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAG-VGNSVLDVVNAFSKACGKPVNYHFAPR----- 291 (338)
T ss_dssp ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTSCCCEEEECC-----
T ss_pred ecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCC-CceeHHHHHHHHHHHhCCCCcceeCCC-----
Confidence 55 46788999999999999999997632 112379999997 799999999999999986533221111
Q ss_pred CcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 326 SSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
.........+|++|++++|||+|+++++++|+++++|++++.
T Consensus 292 --------~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 333 (338)
T 1udb_A 292 --------REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp --------CTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred --------CCCchhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhcc
Confidence 112233567899999999999999999999999999998764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-45 Score=346.37 Aligned_cols=321 Identities=17% Similarity=0.287 Sum_probs=242.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHH-hhCCCeEEEEecCChhh---------hcccc---ccccC-CCCC---eeEEeCCCCC
Q 016370 17 PVTICMIGAGGFIGSHLCEKIL-LETPHKILALDVYNDKI---------KHLLE---PESQT-GADR---IQFHRLNIKH 79 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~-~~~g~~V~~~~r~~~~~---------~~~~~---~~~~~-~~~~---i~~~~~D~~d 79 (390)
+|+||||||+||||++|+++|+ ++ |++|++++|..... ..+.. ..... ...+ ++++.+|++|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC-CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 4699999999999999999999 87 99999999875431 11100 00000 0124 8899999999
Q ss_pred hhHHHHhhc--c-ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc-------C
Q 016370 80 DSRLEGLIK--M-ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI-------G 148 (390)
Q Consensus 80 ~~~~~~~~~--~-~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~-------~ 148 (390)
.+.+.++++ + +|+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+... .
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 999999998 6 999999999775333345677889999999999999999988 8999999999998764 3
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.+++|+.+. .|.+.|+.+|..+|.+++.++.+++++++++||+.+|||+.....+..
T Consensus 161 ~~~~E~~~~----------------------~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~- 217 (397)
T 1gy8_A 161 EPIDINAKK----------------------SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEH- 217 (397)
T ss_dssp CCBCTTSCC----------------------BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCC-
T ss_pred cCcCccCCC----------------------CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCcccccccc-
Confidence 344444433 356789999999999999998888999999999999999753111100
Q ss_pred CCCCchhhHHHHH----HHHhcCC------------CeEEec------CCcceeeeeeHHHHHHHHHHHHhCCCCCC---
Q 016370 229 PSEGVPRVLACFS----NNLLRRQ------------PLKLVD------GGQSQRTFIYIKDAIEAVLLMIENPARAN--- 283 (390)
Q Consensus 229 ~~~~~~~~~~~~~----~~~~~~~------------~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~~~~--- 283 (390)
......++..++ .++..+. ++.++| ++.+.++|||++|+|++++.+++.+....
T Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~ 296 (397)
T 1gy8_A 218 -YQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPND 296 (397)
T ss_dssp -STTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTT
T ss_pred -ccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhccccccccc
Confidence 001123444444 2444443 577776 67889999999999999999998643111
Q ss_pred -C---ceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCccccc-
Q 016370 284 -G---HIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT- 358 (390)
Q Consensus 284 -~---~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~- 358 (390)
+ ++||++++ +.+|+.|+++.+.+.+|.+......+. .........+|++|+++.|||+|++
T Consensus 297 ~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------~~~~~~~~~~d~~k~~~~lG~~p~~~ 362 (397)
T 1gy8_A 297 KSKYFSVFNLGTS-RGYSVREVIEVARKTTGHPIPVRECGR-------------REGDPAYLVAASDKAREVLGWKPKYD 362 (397)
T ss_dssp GGGSEEEEEESCS-CCEEHHHHHHHHHHHHCCCCCEEEECC-------------CTTCCSEECBCCHHHHHHTCCCCSCC
T ss_pred ccCCCcEEEeCCC-CcccHHHHHHHHHHHhCCCCCeeeCCC-------------CCCcccccccCHHHHHHHhCCCCCcC
Confidence 3 79999997 799999999999999986543222111 1122345678999999999999999
Q ss_pred CHHHHHHHHHHHHHHhHh
Q 016370 359 SLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 359 ~~~~~l~~~~~~~~~~~~ 376 (390)
+++++|+++++||+++.+
T Consensus 363 ~l~e~l~~~~~~~~~~~~ 380 (397)
T 1gy8_A 363 TLEAIMETSWKFQRTHPN 380 (397)
T ss_dssp SHHHHHHHHHHHHHTCTT
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999988754
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=328.86 Aligned_cols=280 Identities=16% Similarity=0.101 Sum_probs=236.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih 95 (390)
|+|||||||||||++|++.|+++ |++|++++|. .+|+.|.+.+.++++ ++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE-EYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT-TEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 48999999999999999999999 9999999992 389999999999998 5999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+|+......+..++...+++|+.++.+++++|++.+.||||+||.++|+.....+++|+.+..
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~----------------- 125 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPA----------------- 125 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTTSCCC-----------------
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCCCCCC-----------------
Confidence 999886555557888999999999999999999988789999999999988777777777653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
|.+.|+.+|..+|.+++.++ .+++++||+.+|||+.. .++..++..+..+.++.+.++
T Consensus 126 -----p~~~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 183 (287)
T 3sc6_A 126 -----PINIYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN-------------NFVKTMIRLGKEREEISVVAD 183 (287)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC-------------CHHHHHHHHHTTCSEEEEECS
T ss_pred -----CCCHHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC-------------cHHHHHHHHHHcCCCeEeecC
Confidence 66789999999999998875 37899999999999754 477888888888988888854
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGY 335 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
+.++|+|++|+|+++..+++++. +++||++++ +.+|+.|+++.+.+.+|.+....+.+.... ....
T Consensus 184 --~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~~~~ 249 (287)
T 3sc6_A 184 --QIGSPTYVADLNVMINKLIHTSL---YGTYHVSNT-GSCSWFEFAKKIFSYANMKVNVLPVSTEEF--------GAAA 249 (287)
T ss_dssp --CEECCEEHHHHHHHHHHHHTSCC---CEEEECCCB-SCEEHHHHHHHHHHHHTCCCEEEEECHHHH--------CCSS
T ss_pred --cccCceEHHHHHHHHHHHHhCCC---CCeEEEcCC-CcccHHHHHHHHHHHcCCCcceeeeehhhc--------Cccc
Confidence 78999999999999999999864 779999997 799999999999999997654433321110 1111
Q ss_pred CCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 336 DDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 336 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.......+|++|++ +|||.|+++++++|+++++|++++
T Consensus 250 ~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 250 ARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKSH 287 (287)
T ss_dssp CCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC--
T ss_pred CCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhcC
Confidence 23445679999998 999999999999999999998653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=332.19 Aligned_cols=325 Identities=18% Similarity=0.186 Sum_probs=248.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
|++|+|||||||||||++|+++|+++ |++|++++|+++... .+.... ...+++++.+|++|.+.+.+++++ +
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 76 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELG---IENDVKIIHMDLLEFSNIIRTIEKVQP 76 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTT---CTTTEEECCCCTTCHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhcc---ccCceeEEECCCCCHHHHHHHHHhcCC
Confidence 45689999999999999999999999 999999999875432 111100 124789999999999999999986 6
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
|+|||+|+......+..++...+++|+.++.+++++|.+.+ ++|||+||.++||.....+++|+.+..
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~---------- 146 (345)
T 2z1m_A 77 DEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFY---------- 146 (345)
T ss_dssp SEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCC----------
T ss_pred CEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCC----------
Confidence 99999999765433456778889999999999999999877 699999999999987666666665542
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
|.+.|+.+|..+|.+++.++.+++++++++|++++|||+... ......+..++.++..+.
T Consensus 147 ------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~--------~~~~~~~~~~~~~~~~~~ 206 (345)
T 2z1m_A 147 ------------PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGI--------EFVTRKITYSLARIKYGL 206 (345)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHTTS
T ss_pred ------------CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCC--------cchhHHHHHHHHHHHcCC
Confidence 556899999999999999988889999999999999997541 122233445555566664
Q ss_pred C-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcc--cCCCcccC
Q 016370 249 P-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA--LEEPTVDV 325 (390)
Q Consensus 249 ~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~--~~~~~~~~ 325 (390)
. ....+++...++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+..... .+......
T Consensus 207 ~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~ 282 (345)
T 2z1m_A 207 QDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE---PDDYVIATG-ETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDR 282 (345)
T ss_dssp CSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS---CCCEEECCS-CCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEET
T ss_pred CCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC---CceEEEeCC-CCccHHHHHHHHHHHhCCCccccccccccccccc
Confidence 3 3456778889999999999999999998763 479999997 799999999999999997543211 11110000
Q ss_pred C----cccccC--CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 326 S----SKEFYG--EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 326 ~----~~~~~~--~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
. ...+.. ..........+|++|++++|||+|+++++++|+++++|++++...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 340 (345)
T 2z1m_A 283 NTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVRD 340 (345)
T ss_dssp TTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHhcc
Confidence 0 000000 111223445689999999999999999999999999999887643
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=334.58 Aligned_cols=326 Identities=18% Similarity=0.174 Sum_probs=247.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hcccccccc--CCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPESQ--TGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~~~--~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
||+||||||+||||++|+++|+++ |++|++++|+++.. ..+...... ....+++++.+|++|.+.+.+++++ +
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 579999999999999999999999 99999999976531 111110000 0024788999999999999999986 7
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC----CcEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
|+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+..
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~-------- 151 (372)
T 1db3_A 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFY-------- 151 (372)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCC--------
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCC--------
Confidence 99999999876544556777888999999999999999877 599999999999987655666666542
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
|.+.|+.+|..+|.+++.++.+++++++++|++.+|||+... .....++..++..+..
T Consensus 152 --------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--------~~~~~~~~~~~~~~~~ 209 (372)
T 1db3_A 152 --------------PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE--------TFVTRKITRAIANIAQ 209 (372)
T ss_dssp --------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHT
T ss_pred --------------CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCC--------cchhhHHHHHHHHHHc
Confidence 556899999999999999988889999999999999997541 1223455666667777
Q ss_pred CCC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcc--cCCCcc
Q 016370 247 RQP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA--LEEPTV 323 (390)
Q Consensus 247 ~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~--~~~~~~ 323 (390)
+.+ +...+++++.++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+..... .+....
T Consensus 210 g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~ 285 (372)
T 1db3_A 210 GLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ---PEDFVIATG-VQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGI 285 (372)
T ss_dssp TSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS---CCCEEECCC-CCEEHHHHHHHHHHTTTEEEEEESCGGGCEEE
T ss_pred CCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC---CceEEEcCC-CceeHHHHHHHHHHHhCCCccccccccccccc
Confidence 763 4566888899999999999999999998753 479999997 799999999999999997543221 110000
Q ss_pred ------------cCCc--ccccC--CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 324 ------------DVSS--KEFYG--EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 324 ------------~~~~--~~~~~--~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
.... ..+.. ..........+|++|++++|||+|+++++|+|+++++||+++...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 355 (372)
T 1db3_A 286 VVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 355 (372)
T ss_dssp EEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhc
Confidence 0000 00000 111233456789999999999999999999999999999887654
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=334.81 Aligned_cols=326 Identities=17% Similarity=0.103 Sum_probs=248.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hccccccccC---CCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPESQT---GADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~~~~---~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
|+||||||+||||++|++.|+++ |++|++++|+++.. ..+....... ...+++++.+|+.|.+.+.+++++ +
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred cEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 68999999999999999999999 99999999976431 1111100000 124788999999999999999986 6
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC----CcEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
|+|||+|+......+..++...+++|+.++.+++++|.+.+ ++|||+||.++|+.....+++|+.+..
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~-------- 175 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFY-------- 175 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC--------
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCC--------
Confidence 99999999765333345677889999999999999999877 599999999999987666677766542
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
|.+.|+.+|..+|.+++.++.+++++++++|++.+|||+... ......+..++..+..
T Consensus 176 --------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~--------~~~~~~~~~~~~~~~~ 233 (375)
T 1t2a_A 176 --------------PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA--------NFVTRKISRSVAKIYL 233 (375)
T ss_dssp --------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHH
T ss_pred --------------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCC--------CcchHHHHHHHHHHHc
Confidence 556899999999999999988889999999999999997541 1223345566666666
Q ss_pred CC-CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcc--cCCCcc
Q 016370 247 RQ-PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA--LEEPTV 323 (390)
Q Consensus 247 ~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~--~~~~~~ 323 (390)
+. +....+++++.++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+..... ++....
T Consensus 234 g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~ 309 (375)
T 1t2a_A 234 GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE---PEDFVIATG-EVHSVREFVEKSFLHIGKTIVWEGKNENEVGR 309 (375)
T ss_dssp TSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS---CCCEEECCS-CCEEHHHHHHHHHHHTTCCEEEESCGGGCEEE
T ss_pred CCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC---CceEEEeCC-CcccHHHHHHHHHHHhCCCccccccccccccc
Confidence 65 44556888899999999999999999999863 479999997 799999999999999997543210 111100
Q ss_pred cCC----cccccC--CCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 324 DVS----SKEFYG--EGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 324 ~~~----~~~~~~--~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
... ...+.. ..........+|++|++++|||+|+++++++|+++++|+++.....
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 370 (375)
T 1t2a_A 310 CKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN 370 (375)
T ss_dssp ETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhccC
Confidence 000 000000 0112234467899999999999999999999999999999877653
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=334.00 Aligned_cols=306 Identities=19% Similarity=0.259 Sum_probs=241.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+.+|+|||||||||||++|+++|+++ | ++|++++|.+.... ... ..++. +.+|+.|.+.+..+++
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~-~~~------~~~~~-~~~d~~~~~~~~~~~~~~~~ 113 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTK-FVN------LVDLN-IADYMDKEDFLIQIMAGEEF 113 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHT-TCCCEEEEECCSSGGG-GGG------TTTSC-CSEEEEHHHHHHHHHTTCCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHC-CCcEEEEEecCCCcch-hhc------ccCce-EeeecCcHHHHHHHHhhccc
Confidence 345689999999999999999999999 8 99999999765421 111 11333 6789999999999887
Q ss_pred -cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 89 -MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
++|+|||+|+.... +..++...+++|+.++.+++++|++.+.+|||+||.++|+.....+++|+.+.
T Consensus 114 ~~~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~~~~---------- 181 (357)
T 2x6t_A 114 GDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYE---------- 181 (357)
T ss_dssp SSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSGGGC----------
T ss_pred CCCCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCcCCC----------
Confidence 49999999997653 44567788999999999999999887679999999999998765566666544
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
.|.+.|+.+|..+|.+++.++.+.+++++++||+.+|||+... ......++..++..+..+
T Consensus 182 ------------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~-------~~~~~~~~~~~~~~~~~~ 242 (357)
T 2x6t_A 182 ------------KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH-------KGSMASVAFHLNTQLNNG 242 (357)
T ss_dssp ------------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTT-------CGGGSCHHHHHHHHHHTT
T ss_pred ------------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCC-------CcccchHHHHHHHHHHcC
Confidence 2566899999999999999988889999999999999997641 111235677888888889
Q ss_pred CCeEEecCCcc-eeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 248 QPLKLVDGGQS-QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 248 ~~~~~~~~~~~-~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
.++.+.+++.. .++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+ .....+.+...
T Consensus 243 ~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~-- 315 (357)
T 2x6t_A 243 ESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTG-RAESFQAVADATLAYHKKG-QIEYIPFPDKL-- 315 (357)
T ss_dssp CCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCS-CCEEHHHHHHHHHHHHTCC-CCEEECCCGGG--
T ss_pred CCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEecCC-CcccHHHHHHHHHHHcCCC-CceecCCCccc--
Confidence 88888888888 9999999999999999999763 789999997 7999999999999999976 22222222100
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCc-ccccCHHHHHHHHHHHHHHh
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGW-NPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~-~p~~~~~~~l~~~~~~~~~~ 374 (390)
. ........+|++|+++ ||| .|.++++++|+++++||+++
T Consensus 316 -----~--~~~~~~~~~~~~k~~~-lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 316 -----K--GRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp -----T--TSCCSBCCCCCHHHHH-TTCCCCCCCHHHHHHHHHHHHC--
T ss_pred -----c--cccccccccCHHHHHH-cCCCCCCCCHHHHHHHHHHHHhhc
Confidence 0 0112345789999965 999 79999999999999999764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=332.07 Aligned_cols=307 Identities=15% Similarity=0.148 Sum_probs=232.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+|+|||||||||||++|+++|+++ |++|++++|++.....+.. .+++++.+|+.|.+.+.++++++|+|||
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAY-------LEPECRVAEMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGG-------GCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhcc-------CCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 4579999999999999999999999 9999999998765443321 3789999999999999999999999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC--CCCCCCCCCCCCccccccccCCCC
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG--SFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~--~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
+|+... .+..++...+++|+.++.+++++|++.+ ++|||+||.++|+.... .+ +|+.+..+.
T Consensus 84 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~------------ 148 (342)
T 2x4g_A 84 SAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSL------------ 148 (342)
T ss_dssp C--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSC------------
T ss_pred CCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCcc------------
Confidence 999764 2345667788999999999999999988 89999999999987654 33 555554210
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCC-CCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM-DFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
....+.|+.+|..+|.+++.+++. +++++++||+.+|||+. . + . +..++..+..+.++.
T Consensus 149 ------~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~-------~-----~-~~~~~~~~~~~~~~~ 208 (342)
T 2x4g_A 149 ------PSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIG-------P-----T-TGRVITAIGNGEMTH 208 (342)
T ss_dssp ------CTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSS-------C-----S-TTHHHHHHHTTCCCE
T ss_pred ------ccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcc-------c-----c-HHHHHHHHHcCCCcc
Confidence 001568999999999999998776 99999999999999975 2 1 1 334556666777665
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC------
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV------ 325 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~------ 325 (390)
+ +++.++|+|++|+|++++.+++++. .+++||++++ + +|+.|+++.+.+.+|.+... ..+......
T Consensus 209 ~---~~~~~~~i~v~Dva~~~~~~~~~~~--~g~~~~v~~~-~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~ 280 (342)
T 2x4g_A 209 Y---VAGQRNVIDAAEAGRGLLMALERGR--IGERYLLTGH-N-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGR 280 (342)
T ss_dssp E---ECCEEEEEEHHHHHHHHHHHHHHSC--TTCEEEECCE-E-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHH
T ss_pred c---cCCCcceeeHHHHHHHHHHHHhCCC--CCceEEEcCC-c-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHH
Confidence 5 4578999999999999999998764 3789999997 7 99999999999999976543 332211000
Q ss_pred -----Cc--ccccCC-CCCCCCCCcCcHHHHHHhcCc-ccccCHHHHHHHHHHHHHHh
Q 016370 326 -----SS--KEFYGE-GYDDSDKRIPDMTIINQQLGW-NPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 326 -----~~--~~~~~~-~~~~~~~~~~d~~k~~~~lg~-~p~~~~~~~l~~~~~~~~~~ 374 (390)
.. ..+... .........+|++|+++.||| +| ++++++|+++++||+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 281 LRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDN 337 (342)
T ss_dssp C----------------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHc
Confidence 00 000000 001134567999999999999 99 89999999999999875
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=337.14 Aligned_cols=337 Identities=17% Similarity=0.139 Sum_probs=243.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh-----------------ccccccccCCCCCeeEEeCCC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-----------------HLLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~i~~~~~D~ 77 (390)
.+|++||||||+||||++|+++|+++ |++|++++|...... .+.... .....+++++.+|+
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK-ALTGKSIELYVGDI 86 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH-HHHCCCCEEEESCT
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhC-CCeEEEEEecCccccccccccccccccchhhhhhhhHh-hccCCceEEEECCC
Confidence 57899999999999999999999999 999999988643211 000000 00124789999999
Q ss_pred CChhHHHHhhcc--ccEEEEeccccCCccccCChh---HHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCC
Q 016370 78 KHDSRLEGLIKM--ADLTINLAAICTPADYNTRPL---DTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 78 ~d~~~~~~~~~~--~d~Vih~a~~~~~~~~~~~~~---~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~ 150 (390)
+|.+.+.+++++ +|+|||+||.........++. ..+++|+.++.+++++|++.+ ++|||+||.++||... .+
T Consensus 87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~ 165 (404)
T 1i24_A 87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-ID 165 (404)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SC
T ss_pred CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CC
Confidence 999999999998 999999999765433333443 377899999999999999887 5999999999998754 23
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCC---C--
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIP---G-- 225 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~-- 225 (390)
++|+.... .+............|.+.|+.+|..+|.+++.++++++++++++||+.+|||+..... .
T Consensus 166 ~~E~~~~~--------~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~ 237 (404)
T 1i24_A 166 IEEGYITI--------THNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELR 237 (404)
T ss_dssp BCSSEEEE--------EETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGC
T ss_pred CCcccccc--------ccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccc
Confidence 33331000 0000000000012366789999999999999988888999999999999999753100 0
Q ss_pred -CCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCC--ceEEecCCCCcccHHHHH
Q 016370 226 -IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANG--HIFNVGNPHNEVTVRQLA 302 (390)
Q Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~--~~~nv~~~~~~~s~~~l~ 302 (390)
...+......++..++..+..+.++.+.+++.+.++|+|++|+|++++.+++++. ..+ ++||+++ +.+|+.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~--~~~s~~e~~ 314 (404)
T 1i24_A 238 NRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT--EQFSVNELA 314 (404)
T ss_dssp CCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS--EEEEHHHHH
T ss_pred cccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC--CCCcHHHHH
Confidence 0000000124678888888889998888888899999999999999999999864 235 6999988 489999999
Q ss_pred HHHHHH---hhcccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 303 EMMTEV---YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 303 ~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
+.+.+. +|.+......+.+.. ........+|++|++ +|||+|+++++++++++++|++...+.
T Consensus 315 ~~i~~~~~~~g~~~~~~~~p~~~~-----------~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~ 380 (404)
T 1i24_A 315 SLVTKAGSKLGLDVKKMTVPNPRV-----------EAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDR 380 (404)
T ss_dssp HHHHHHHHTTTCCCCEEEECCSSC-----------SCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHhhCCCccccccCcccC-----------ccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhc
Confidence 999998 554432222221110 012234568999997 799999999999999999999876654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=331.12 Aligned_cols=304 Identities=16% Similarity=0.190 Sum_probs=234.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE-TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
+|+|||||||||||++|+++|+++ +|++|++++|++.... + ..+++++.+|+.|.+.+.++++ ++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~--------~~~~~~~~~D~~d~~~~~~~~~~~~~d~v 72 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V--------VNSGPFEVVNALDFNQIEHLVEVHKITDI 72 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H--------HHSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c--------cCCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence 378999999999999999999997 5799999999765422 1 1257899999999999999998 79999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC-CCCCCCCCCCCCccccccccCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
||+|+.... ....++...+++|+.++.+++++|++.+ ++|||+||.++|+.... .+.+|+.+.
T Consensus 73 ih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~-------------- 137 (312)
T 2yy7_A 73 YLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIM-------------- 137 (312)
T ss_dssp EECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBC--------------
T ss_pred EECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcC--------------
Confidence 999997542 2235677889999999999999999988 89999999999987542 344454433
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
.|.+.|+.+|..+|.+++.++++++++++++||+.+|||... |.......+..++.....++++.
T Consensus 138 --------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 2yy7_A 138 --------EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTP-------PGGGTTDYAVDIFYKAIADKKYE 202 (312)
T ss_dssp --------CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSC-------CCSCTTTHHHHHHHHHHHTSEEE
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCC-------CCCchhhhHHHHHHHHHcCCCeE
Confidence 256789999999999999988888999999999999998653 11111122333333444455667
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCC--CCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARA--NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~--~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
+.+++++.++|+|++|+|++++.+++++... .+++||+++ +.+|+.|+++.+.+.+|.. .....+. . ..
T Consensus 203 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~--~~~s~~e~~~~i~~~~~~~-~i~~~~~----~--~~ 273 (312)
T 2yy7_A 203 CFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA--MSFTPTEIANEIKKHIPEF-TITYEPD----F--RQ 273 (312)
T ss_dssp ESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS--EEECHHHHHHHHHTTCTTC-EEEECCC----T--HH
T ss_pred EecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC--CccCHHHHHHHHHHHCCCC-ceEeccC----c--cc
Confidence 7778888999999999999999999986421 248999986 5899999999999988731 1111110 0 00
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHH
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 372 (390)
. ........+|++|++++|||+|+++++++|+++++||+
T Consensus 274 ~----~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 274 K----IADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp H----HHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred c----ccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 0 01122457899999999999999999999999999984
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=333.18 Aligned_cols=315 Identities=18% Similarity=0.155 Sum_probs=244.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-----hccccccccCCCC-CeeEEeCCCCChhHHHHhhcc--
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-----KHLLEPESQTGAD-RIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~-~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
|+||||||+||||++|++.|+++ |++|++++|+.... ..+..... .... +++++.+|+.|.+.+.+++++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPH-NVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred CeEEEEcCCchHHHHHHHHHHHC-CCEEEEEecCCccccchhhhhhhhccc-cccccceEEEECCCCCHHHHHHHHHhcC
Confidence 68999999999999999999999 99999999976541 11110000 0012 788999999999999999986
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C-----cEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-----RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-----~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
+|+|||+|+......+..++...+++|+.++.+++++|.+.+ + +|||+||.++||.... +++|+.+..
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~----- 180 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFH----- 180 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCC-----
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCC-----
Confidence 699999999765433345677889999999999999998876 4 9999999999998765 666665542
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
|.+.|+.+|..+|.+++.++.+++++++++|++++|||+... ......+..++..
T Consensus 181 -----------------~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--------~~~~~~~~~~~~~ 235 (381)
T 1n7h_A 181 -----------------PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE--------NFVTRKITRALGR 235 (381)
T ss_dssp -----------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--------TSHHHHHHHHHHH
T ss_pred -----------------CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC--------cchhHHHHHHHHH
Confidence 556899999999999999988889999999999999997541 1122345555666
Q ss_pred HhcCCC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCc
Q 016370 244 LLRRQP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPT 322 (390)
Q Consensus 244 ~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~ 322 (390)
+..+.+ ....+++.+.++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+........+
T Consensus 236 ~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~- 310 (381)
T 1n7h_A 236 IKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK---PDDYVVATE-EGHTVEEFLDVSFGYLGLNWKDYVEIDQ- 310 (381)
T ss_dssp HHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS---CCEEEECCS-CEEEHHHHHHHHHHHTTCCGGGTEEECG-
T ss_pred HHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC---CCeEEeeCC-CCCcHHHHHHHHHHHcCCCcccccccCc-
Confidence 666653 3456788899999999999999999998763 489999997 7999999999999999864211000000
Q ss_pred ccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
.. ..........+|++|+++.|||+|+++++++|+++++||+++....
T Consensus 311 ------~~--~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 358 (381)
T 1n7h_A 311 ------RY--FRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 358 (381)
T ss_dssp ------GG--SCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------cc--CCccccccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhhcccc
Confidence 00 0112234467899999999999999999999999999999876543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=356.05 Aligned_cols=337 Identities=35% Similarity=0.663 Sum_probs=260.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH-HHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR-LEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~-~~~~~~~~d~V 93 (390)
+++|+|||||||||||++|+++|++++|++|++++|++.....+.. ..+++++.+|++|.++ +..+++++|+|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~------~~~v~~v~~Dl~d~~~~~~~~~~~~D~V 386 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN------HPHFHFVEGDISIHSEWIEYHVKKCDVV 386 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT------CTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc------CCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence 4678999999999999999999999757999999998765443322 2578999999999764 78888899999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
||+|+...+..+..++...+++|+.++.+++++|++.+++|||+||.++|+.....+++|+.+..
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~--------------- 451 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNL--------------- 451 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCE---------------
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCcccc---------------
Confidence 99999876544456777889999999999999999888999999999999987666666665421
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
...|...|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+...... +......++..++.++..+.++.+.
T Consensus 452 ~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~ 528 (660)
T 1z7e_A 452 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNA---ARIGSSRAITQLILNLVEGSPIKLI 528 (660)
T ss_dssp EECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHH---HTTTCSCHHHHHHHHHHHTCCEEEE
T ss_pred ccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCcccccc---ccccccchHHHHHHHHHcCCCcEEe
Confidence 0112224667899999999999999888889999999999999997531000 0000124667788888889998888
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCC-cccHHHHHHHHHHHhhcccCCcccCCCccc--CCccc
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHN-EVTVRQLAEMMTEVYAKVSGEAALEEPTVD--VSSKE 329 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~-~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~--~~~~~ 329 (390)
+++.+.++|+|++|+|++++.+++.+.. ..+++||++++ + .+|+.|+++.+.+.+|.+......+..... .....
T Consensus 529 g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~-~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~ 607 (660)
T 1z7e_A 529 DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP-ENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSS 607 (660)
T ss_dssp GGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCG-GGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHH
T ss_pred CCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCC-CCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccc
Confidence 8888999999999999999999987531 25789999996 5 899999999999999975433322221100 00011
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
+.+..+.......+|++|++++|||+|+++++++|+++++||+++..
T Consensus 608 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp HHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred cccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 11222233445678999999999999999999999999999987653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=326.17 Aligned_cols=292 Identities=14% Similarity=0.085 Sum_probs=234.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+|||||||||||++|+++|+ + |++|++++|++. ++.+|+.|.+.+.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P-VGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T-TSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-c-CCeEEEeccccc------------------cccccCCCHHHHHHHHHhcCCCEEEE
Confidence 589999999999999999999 7 999999999651 246899999999999987 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+|+......+..++...+++|+.++.+++++|++.+.||||+||.++|+.....+++|+.+..
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~----------------- 123 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATS----------------- 123 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCC-----------------
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCCCCCC-----------------
Confidence 999765434456788899999999999999999988789999999999987666677766542
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
|.+.|+.+|..+|.+++.++ .+++++||+.+|||+.. .++..++..+..+.++.+.++
T Consensus 124 -----p~~~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 181 (299)
T 1n2s_A 124 -----PLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN-------------NFAKTMLRLAKERQTLSVIND 181 (299)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC-------------CHHHHHHHHHHHCSEEEEECS
T ss_pred -----CccHHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC-------------cHHHHHHHHHhcCCCEEeecC
Confidence 56689999999999998875 38999999999999753 366777788888888877754
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCC-CC-CCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPA-RA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGE 333 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~-~~-~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
+.++|+|++|+|+++..+++++. .. .+++||++++ +.+|+.|+++.+.+.+|.+......+. ........+ ..
T Consensus 182 --~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~-~~ 256 (299)
T 1n2s_A 182 --QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG-GTTTWHDYAALVFDEARKAGITLALTE-LNAVPTSAY-PT 256 (299)
T ss_dssp --CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB-SCEEHHHHHHHHHHHHHHHTCCCCCCE-EEEECSTTS-CC
T ss_pred --cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC-CCCCHHHHHHHHHHHhCCCcccccccc-ccccccccc-cC
Confidence 78999999999999999998752 11 3789999997 799999999999999997632111100 000000000 11
Q ss_pred CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 334 GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 334 ~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.........+|++|++++|||+|+ +++++|+++++||+++
T Consensus 257 ~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~ 296 (299)
T 1n2s_A 257 PASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT 296 (299)
T ss_dssp SSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred cCCCCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Confidence 112345678999999999999998 8999999999999864
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=328.52 Aligned_cols=301 Identities=19% Similarity=0.262 Sum_probs=222.0
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----ccE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-----ADL 92 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-----~d~ 92 (390)
+|||||||||||++|+++|+++ | ++|++++|.+..... ... .++. +.+|+.|.+.+..++++ +|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~-~~~------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKF-VNL------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCCEEEEECCSSGGGG-HHH------HTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHC-CCcEEEEEccCCCCchh-hhc------Ccce-eccccccHHHHHHHHhccccCCCcE
Confidence 5999999999999999999999 8 999999997654211 000 1233 67899999999999875 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
|||+|+.... +..++...+++|+.++.+++++|++.+.+|||+||.++|+.....+++|+.+.
T Consensus 72 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~--------------- 134 (310)
T 1eq2_A 72 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYE--------------- 134 (310)
T ss_dssp EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGC---------------
T ss_pred EEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCCCCC---------------
Confidence 9999997753 44577788999999999999999987779999999999998765566665544
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
.|.+.|+.+|..+|.+++.++++.+++++++||+.+|||+..+ ......++..++..+..+.++.+
T Consensus 135 -------~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 200 (310)
T 1eq2_A 135 -------KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH-------KGSMASVAFHLNTQLNNGESPKL 200 (310)
T ss_dssp -------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGG-------GGGGSCHHHHHHHHHHC------
T ss_pred -------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCC-------CCccchHHHHHHHHHHcCCCcEE
Confidence 2566899999999999999988889999999999999997641 11123577888888888988888
Q ss_pred ecCCcc-eeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 253 VDGGQS-QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 253 ~~~~~~-~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
.+++.+ .++|+|++|+|++++.+++++. +++||++++ +.+|+.|+++.+.+.+|.+ .....+.+...
T Consensus 201 ~~~g~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~------- 268 (310)
T 1eq2_A 201 FEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTG-RAESFQAVADATLAYHKKG-QIEYIPFPDKL------- 268 (310)
T ss_dssp -------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCS-CCBCHHHHHHHC--------------------------
T ss_pred ecCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCC-CccCHHHHHHHHHHHcCCC-CceeCCCChhh-------
Confidence 888888 9999999999999999999863 789999997 7999999999999999976 22222211100
Q ss_pred CCCCCCCCCCcCcHHHHHHhcCc-ccccCHHHHHHHHHHHHHHh
Q 016370 332 GEGYDDSDKRIPDMTIINQQLGW-NPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 332 ~~~~~~~~~~~~d~~k~~~~lg~-~p~~~~~~~l~~~~~~~~~~ 374 (390)
.........+|++|+++ ||| .|.++++++|+++++||+++
T Consensus 269 --~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 269 --KGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp -----CCCSCCBCCHHHHH-TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred --hcccccccccchHHHHh-cCCCCCCCCHHHHHHHHHHHHHhc
Confidence 00112345689999965 999 79999999999999999764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=325.82 Aligned_cols=277 Identities=13% Similarity=0.119 Sum_probs=225.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-ccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-ADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-~d~V 93 (390)
|+||+||||| +||||++|++.|+++ |++|++++|+.+.. ..+++++.+|+.|.+.+.+++++ +|+|
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~-g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 67 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQ-GHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVHLRPEIL 67 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhcCCCCEE
Confidence 4578999999 599999999999999 99999999986542 25889999999999999999998 9999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
||+|+... .++...+++|+.++.+++++|++.+ ++|||+||.++||...+.+++|+.+..
T Consensus 68 ih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-------------- 128 (286)
T 3gpi_A 68 VYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPI-------------- 128 (286)
T ss_dssp EECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCC--------------
T ss_pred EEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCC--------------
Confidence 99998642 3456778899999999999999988 999999999999998777777777653
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
|.+.|+.+|..+|.+ +.+ ++++++||+.+|||+.. .+ +..+.. ...
T Consensus 129 --------p~~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------------~~----~~~~~~-~~~-- 174 (286)
T 3gpi_A 129 --------AKDFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------------RM----IRQAQT-PEQ-- 174 (286)
T ss_dssp --------CCSHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC-------------HH----HHHTTC-GGG--
T ss_pred --------CCChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch-------------hH----HHHHHh-ccc--
Confidence 567899999999998 543 89999999999999754 22 333444 222
Q ss_pred ecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 253 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
.+++...++|+|++|+|++++.+++++. ...+++||++++ +.+|+.|+++.+.+.+|.+......+
T Consensus 175 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~------------ 241 (286)
T 3gpi_A 175 WPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN-QPLPVHDLLRWLADRQGIAYPAGATP------------ 241 (286)
T ss_dssp SCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCS-CCEEHHHHHHHHHHHTTCCCCCSCCC------------
T ss_pred CCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCC-CCCCHHHHHHHHHHHcCCCCCCCCCc------------
Confidence 3677889999999999999999999841 136789999997 79999999999999999765433221
Q ss_pred CCCCCCCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHHHHHHhH
Q 016370 332 GEGYDDSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLTYQHRTY 375 (390)
Q Consensus 332 ~~~~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~~~~~~ 375 (390)
.......+|++|++ +|||+|++ +++++|+++++|+..+.
T Consensus 242 ----~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~~ 281 (286)
T 3gpi_A 242 ----PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREGH 281 (286)
T ss_dssp ----CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC--
T ss_pred ----ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhccc
Confidence 12346679999997 99999999 69999999999997654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=321.39 Aligned_cols=299 Identities=21% Similarity=0.235 Sum_probs=229.6
Q ss_pred CCCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 8 LDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 8 ~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
.......++||+|||||||||||++|+++|+++ |++|++++|........... ..+++++.+|++|.+.+.+++
T Consensus 12 ~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~l~~-----~~~~~~~~~Dl~d~~~~~~~~ 85 (333)
T 2q1w_A 12 SGLVPRGSHMKKVFITGICGQIGSHIAELLLER-GDKVVGIDNFATGRREHLKD-----HPNLTFVEGSIADHALVNQLI 85 (333)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGSCC-----CTTEEEEECCTTCHHHHHHHH
T ss_pred CceeeecCCCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCCccchhhHhh-----cCCceEEEEeCCCHHHHHHHH
Confidence 344556778999999999999999999999999 99999999976432211110 147899999999999999999
Q ss_pred cc--ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccc----cccCCCCCCCCCCCCC
Q 016370 88 KM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYG----KTIGSFLPKDSPLRQD 160 (390)
Q Consensus 88 ~~--~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~----~~~~~~~~e~~~~~~~ 160 (390)
++ +|+|||+|+..... ...++. +++|+.++.+++++|.+.+ ++|||+||.++|+ .... +++|+.
T Consensus 86 ~~~~~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~----- 156 (333)
T 2q1w_A 86 GDLQPDAVVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR----- 156 (333)
T ss_dssp HHHCCSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-----
T ss_pred hccCCcEEEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC-----
Confidence 98 99999999987542 223333 8899999999999999988 8999999999998 4332 444433
Q ss_pred ccccccccCCCCcccCCCCCCC-chhHHHHHHHHHHHHH-HhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQR-WSYACAKQLIERLIYA-EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~-~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
.|. +.|+.+|..+|.+++. +. +++++||+.+|||+.. ..++.
T Consensus 157 -------------------~p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~------------~~~~~ 200 (333)
T 2q1w_A 157 -------------------NPANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV------------SGPLP 200 (333)
T ss_dssp -------------------CCTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC------------SSHHH
T ss_pred -------------------CCCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc------------CcHHH
Confidence 144 5899999999999987 54 7999999999999731 23566
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCccc
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~ 318 (390)
.++..+..+. .+.+ +.+.++++|++|+|++++.+++.+. +++||++++ +.+|+.|+++.+.+.+|.+ .....
T Consensus 201 ~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~~~-~~~s~~e~~~~i~~~~g~~-~~~~~ 272 (333)
T 2q1w_A 201 IFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG---HGAYHFSSG-TDVAIKELYDAVVEAMALP-SYPEP 272 (333)
T ss_dssp HHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC---CEEEECSCS-CCEEHHHHHHHHHHHTTCS-SCCCC
T ss_pred HHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeCCC-CCccHHHHHHHHHHHhCCC-CceeC
Confidence 6777766665 3445 6778999999999999999998763 789999997 7999999999999999976 33222
Q ss_pred CCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+.+. ...........+|++|+++. ||+|+++++++|+++++||+++.
T Consensus 273 ~~~~---------~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~ 319 (333)
T 2q1w_A 273 EIRE---------LGPDDAPSILLDPSRTIQDF-GKIEFTPLKETVAAAVAYFREYG 319 (333)
T ss_dssp EEEE---------CCTTSCCCCCBCCHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHC
T ss_pred CCCC---------cccccccccccCCHHHHHhc-CCCcCCCHHHHHHHHHHHHHHHC
Confidence 2111 00001224577999999888 99999999999999999998753
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=321.08 Aligned_cols=292 Identities=20% Similarity=0.281 Sum_probs=232.0
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
+...+++|+||||||+||||++|+++|+++ |++|++++|........... ..+++++.+|++|.+.+.++++
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~-----l~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFATGKREVLPP-----VAGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCSSSCGGGSCS-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCccchhhhhc-----cCCceEEEeeCCCHHHHHHHHhhc
Confidence 345678899999999999999999999999 99999999965433211111 1478999999999999999999
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCC--CCCCCCCCCCCccccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGS--FLPKDSPLRQDPAYYV 165 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~--~~~e~~~~~~~~~~~~ 165 (390)
++|+|||+|+..... ...++. +++|+.++.+++++|.+.+ ++|||+||.++|+..... +++|+.
T Consensus 88 ~~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~---------- 154 (330)
T 2pzm_A 88 KPTHVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT---------- 154 (330)
T ss_dssp CCSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC----------
T ss_pred CCCEEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC----------
Confidence 899999999977532 223333 8899999999999999888 899999999999875433 444443
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
.|.+.|+.+|..+|.+++.+ +++++++||+++|||+.. ..++..++..+.
T Consensus 155 --------------~~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~------------~~~~~~~~~~~~ 204 (330)
T 2pzm_A 155 --------------APFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA------------IGPIPTFYKRLK 204 (330)
T ss_dssp --------------CCCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC------------SSHHHHHHHHHH
T ss_pred --------------CCCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC------------CCHHHHHHHHHH
Confidence 14458999999999998765 799999999999999742 235666666666
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHH-HHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIE-AVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~-~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~ 324 (390)
.+. .+.+++. .++++|++|+|+ +++.+++.+. +++||++++ +.+|+.|+++.+.+.+|.+ .....+.+.
T Consensus 205 ~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~---g~~~~v~~~-~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-- 274 (330)
T 2pzm_A 205 AGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP---TGVFNVSTG-EGHSIKEVFDVVLDYVGAT-LAEPVPVVA-- 274 (330)
T ss_dssp TTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC---CEEEEESCS-CCEEHHHHHHHHHHHHTCC-CSSCCCEEC--
T ss_pred cCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC---CCEEEeCCC-CCCCHHHHHHHHHHHhCCC-CceeCCCCc--
Confidence 665 3445566 899999999999 9999998752 889999997 7999999999999999976 322221110
Q ss_pred CCcccccCCCCCCCCCCcCcHHHH-----HHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 325 VSSKEFYGEGYDDSDKRIPDMTII-----NQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~d~~k~-----~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
......+|++|+ ++ |||+|+++++++|+++++||+++
T Consensus 275 ------------~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~~~~~~ 316 (330)
T 2pzm_A 275 ------------PGADDVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLAWYDKY 316 (330)
T ss_dssp ------------CCTTSCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ------------chhhccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHHHHHhh
Confidence 223556777777 77 99999999999999999999864
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=317.28 Aligned_cols=280 Identities=14% Similarity=0.097 Sum_probs=230.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
..|+|||||||||||++|+++|+++ |++|++++|. .+|+.|.+.+.++++ ++|+|
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGK-NVEVIPTDVQ----------------------DLDITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTS-SEEEEEECTT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred ccceEEEECCCChHHHHHHHHHHhC-CCeEEeccCc----------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence 4579999999999999999999999 9999999985 289999999999998 69999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
||+|+......+..++...+++|+.++.+++++|++.+.+|||+||.++|+.....+++|+.+..
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~~~~~--------------- 132 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVN--------------- 132 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCC---------------
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCCCCCC---------------
Confidence 99999765433345677889999999999999999877799999999999987666677766542
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
|.+.|+.+|..+|.+++.+. .+++++||+.+||| .. .++..++..+..+.++.+.
T Consensus 133 -------~~~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~-------------~~~~~~~~~~~~~~~~~~~ 187 (292)
T 1vl0_A 133 -------PQSAYGKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN-------------NFVKTMINLGKTHDELKVV 187 (292)
T ss_dssp -------CCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS-------------CHHHHHHHHHHHCSEEEEE
T ss_pred -------CccHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc-------------ChHHHHHHHHhcCCcEEee
Confidence 55689999999999998764 47999999999999 32 3566777777778887777
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCC
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGE 333 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
+ ++.++|+|++|+|++++.+++++ .+++||++++ +.+|+.|+++.+.+.+|.+......+..... .
T Consensus 188 ~--~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~ 253 (292)
T 1vl0_A 188 H--DQVGTPTSTVDLARVVLKVIDEK---NYGTFHCTCK-GICSWYDFAVEIFRLTGIDVKVTPCTTEEFP--------R 253 (292)
T ss_dssp S--SCEECCEEHHHHHHHHHHHHHHT---CCEEEECCCB-SCEEHHHHHHHHHHHHCCCCEEEEECSTTSC--------C
T ss_pred c--CeeeCCccHHHHHHHHHHHHhcC---CCcEEEecCC-CCccHHHHHHHHHHHhCCCCceeeccccccC--------c
Confidence 5 47899999999999999999875 5789999997 7999999999999999976433322221110 0
Q ss_pred CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHH
Q 016370 334 GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373 (390)
Q Consensus 334 ~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 373 (390)
.........+|++|+++.|||+|+ +++++|+++++||++
T Consensus 254 ~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 254 PAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM 292 (292)
T ss_dssp SSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred ccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence 112234577999999999999999 999999999999863
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=319.81 Aligned_cols=303 Identities=16% Similarity=0.196 Sum_probs=233.6
Q ss_pred EEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLE-TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTIN 95 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih 95 (390)
+||||||+||||++|+++|+++ +|++|++++|+.... .+++++.+|+.|.+.+.++++ ++|+|||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------GGIKFITLDVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------TTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------cCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence 5999999999999999999997 579999999875421 156789999999999999998 7999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc-CCCCCCCCCCCCCccccccccCCCCc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI-GSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
+|+.... ....++...+++|+.++.+++++|++.+ ++|||+||.++|+... ..+.+|+.+.
T Consensus 69 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~---------------- 131 (317)
T 3ajr_A 69 LAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITIT---------------- 131 (317)
T ss_dssp CCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCC----------------
T ss_pred CCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccC----------------
Confidence 9997532 2234677889999999999999999988 8999999999998753 2334444433
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
.|.+.|+.+|..+|.+++.++++++++++++||+.+||+... |......++...+.....++++...
T Consensus 132 ------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (317)
T 3ajr_A 132 ------RPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAE-------PTAGTTDYAVEIFYYAVKREKYKCY 198 (317)
T ss_dssp ------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSC-------CCSCSSTHHHHHHHHHHTTCCEEEC
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCC-------CCCcchhHHHHHHHHHHhCCCceee
Confidence 366789999999999999988888999999999999998643 1111112233333444555666777
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCC--CCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARA--NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~--~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
++++..++|+|++|+|++++.+++++... .+++||+++ ..+|+.|+++.+.+.+|.. .....+. . ...
T Consensus 199 ~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~--~~~s~~e~~~~i~~~~~~~-~i~~~~~--~----~~~- 268 (317)
T 3ajr_A 199 LAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA--YTFTPSELYSKIKERIPEF-EIEYKED--F----RDK- 268 (317)
T ss_dssp SCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS--EEECHHHHHHHHHTTCCSC-CEEECCC--H----HHH-
T ss_pred cCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC--ccccHHHHHHHHHHHCCcc-ccccccc--c----chh-
Confidence 77888999999999999999999886421 248999997 3799999999999988731 1111110 0 000
Q ss_pred CCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 332 GEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 332 ~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
........+|++|++++|||+|+++++++|+++++|++++..
T Consensus 269 ---~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 310 (317)
T 3ajr_A 269 ---IAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLG 310 (317)
T ss_dssp ---HHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred ---hccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhc
Confidence 011223568999999999999999999999999999987654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=318.30 Aligned_cols=308 Identities=14% Similarity=0.119 Sum_probs=241.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-------CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-------HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~ 86 (390)
.+++|+||||||+||||++|+++|+++ | ++|++++|........ ...+++++.+|+.|.+.+.++
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~-g~~~~r~~~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~ 82 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKD-GSLGGKPVEKFTLIDVFQPEAPAG-------FSGAVDARAADLSAPGEAEKL 82 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHH-CEETTEEEEEEEEEESSCCCCCTT-------CCSEEEEEECCTTSTTHHHHH
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhc-CCcccCCCceEEEEEccCCccccc-------cCCceeEEEcCCCCHHHHHHH
Confidence 467889999999999999999999999 8 8999999976432210 135788999999999999999
Q ss_pred hc-cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC------CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 87 IK-MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN------KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 87 ~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+. ++|+|||+|+.... ....++...+++|+.++.+++++|++.+ ++|||+||..+|+.....+++|+.+..
T Consensus 83 ~~~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~- 160 (342)
T 2hrz_A 83 VEARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTT- 160 (342)
T ss_dssp HHTCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCC-
T ss_pred HhcCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCC-
Confidence 85 79999999997631 2234677788999999999999998753 799999999999976555666666542
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecC-CCCCCCCCCCCCCCCchhhHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG-PRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G-~~~~~~~~~~~~~~~~~~~~~ 238 (390)
|.+.|+.+|..+|.+++.++.+++++.+++|++.+|| |+.. ......++.
T Consensus 161 ---------------------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~--------~~~~~~~~~ 211 (342)
T 2hrz_A 161 ---------------------PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKP--------NAAASGFFS 211 (342)
T ss_dssp ---------------------CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSC--------CCSGGGHHH
T ss_pred ---------------------CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCC--------cchhHHHHH
Confidence 5568999999999999999888889999999999999 6532 112245677
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC--CCCceEEecCCCCcccHHHHHHHHHHHhhcccC--
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR--ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-- 314 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~-- 314 (390)
.++.....+.++.++++++..++++|++|+|++++.+++.+.. ..+++||+++ +.+|+.|+++.+.+.+|.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g--~~~s~~e~~~~i~~~~g~~~~~~ 289 (342)
T 2hrz_A 212 NILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG--LSATVGEQIEALRKVAGEKAVAL 289 (342)
T ss_dssp HHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC--EEEEHHHHHHHHHHHHCHHHHTT
T ss_pred HHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC--CCCCHHHHHHHHHHHcCcccccc
Confidence 7888888888877776667788899999999999999987531 1467999964 589999999999999987642
Q ss_pred CcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHH
Q 016370 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 372 (390)
....+.+.. ... .......+|++|+++ |||+|+++++++|+++++|++
T Consensus 290 ~~~~~~~~~----~~~-----~~~~~~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 290 IRREPNEMI----MRM-----CEGWAPGFEAKRARE-LGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp EEECCCHHH----HHH-----HTTSCCCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred eeeccCcch----hhh-----hcccccccChHHHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence 111111000 000 011223589999988 999999999999999999986
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=345.36 Aligned_cols=322 Identities=17% Similarity=0.240 Sum_probs=237.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~ 92 (390)
+++|+||||||+||||++|+++|+++ |++|++++|..................+++++.+|+.|.+.+.++++ ++|+
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 56789999999999999999999999 99999999875432110000000002478899999999999999998 7999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC----CCCCCCCCCCCCccccccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG----SFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~----~~~~e~~~~~~~~~~~~~~ 167 (390)
|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++|+.... .+++|+.+.
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~---------- 157 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL---------- 157 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC----------
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCC----------
Confidence 999999765333344567789999999999999999888 89999999999986532 234444333
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh--cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE--NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
.|.+.|+.+|.++|.+++.++++ .+++++++||+.+|||+.....+.+ +......++..+.....
T Consensus 158 ------------~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 224 (699)
T 1z45_A 158 ------------GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGED-PLGIPNNLLPYMAQVAV 224 (699)
T ss_dssp ------------CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCC-CSSSCCSHHHHHHHHHT
T ss_pred ------------CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccc-cccchhHHHHHHHHHHh
Confidence 25668999999999999988766 6899999999999998653211100 00011234444444333
Q ss_pred c-CCCeEEec------CCcceeeeeeHHHHHHHHHHHHhCC-----CCCCCceEEecCCCCcccHHHHHHHHHHHhhccc
Q 016370 246 R-RQPLKLVD------GGQSQRTFIYIKDAIEAVLLMIENP-----ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 246 ~-~~~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~-----~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~ 313 (390)
. +.++.++| ++.+.++|||++|+|++++.+++.. ....+++||++++ +.+|+.|+++.+++.+|.+.
T Consensus 225 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 225 GRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-KGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp TSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTCCC
T ss_pred cCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC-CCCcHHHHHHHHHHHhCCCC
Confidence 2 34666665 5788999999999999999998742 1123579999997 79999999999999999764
Q ss_pred CCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.....+. ...+.....+|++|++++|||+|+++++++|+++++|++++
T Consensus 304 ~~~~~~~-------------~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~ 351 (699)
T 1z45_A 304 PYKVTGR-------------RAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 351 (699)
T ss_dssp CC----------------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred CceecCC-------------CCCccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhC
Confidence 3322110 11223456799999999999999999999999999999875
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=312.95 Aligned_cols=293 Identities=13% Similarity=0.107 Sum_probs=204.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vi 94 (390)
+|+|||||||||||++|+++|+++ |++|++++|+... .+ ++.+|++|.+.+.+++++ +|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN-NWHAVGCGFRRAR-------------PK--FEQVNLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEC---------------------------------CHHHHHHHCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC-CCeEEEEccCCCC-------------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence 479999999999999999999999 9999999986532 12 678999999999999886 99999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
|+|+......+..++...+++|+.++.+++++|.+.+.+|||+||.++|+. ...+++|+.+..
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~~~E~~~~~---------------- 128 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPA---------------- 128 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCSBCTTSCCC----------------
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCCCCCCCCCC----------------
Confidence 999987544445667788999999999999999988789999999999988 445566665542
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-cCCCeEEe
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-RRQPLKLV 253 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 253 (390)
|.+.|+.+|..+|.+++.+ +++++++||+.+|||..... ..++..++..+. .+.++.+.
T Consensus 129 ------~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 188 (315)
T 2ydy_A 129 ------PLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLE----------ESAVTVMFDKVQFSNKSANMD 188 (315)
T ss_dssp ------CCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGG----------GSTTGGGHHHHHCCSSCEEEE
T ss_pred ------CcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCccc----------ccHHHHHHHHHHhcCCCeeec
Confidence 5568999999999999776 46789999999999976410 123344455555 67777665
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCCCCcccHHHHHHHHHHHhhcccC-CcccCCCcccCCcccc
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-EAALEEPTVDVSSKEF 330 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~ 330 (390)
+ .+.++++|++|+|++++.+++++ ....+++||++++ +.+|+.|+++.+.+.+|.+.. ..+.+. .+.
T Consensus 189 ~--~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~--- 258 (315)
T 2ydy_A 189 H--WQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGN-EQMTKYEMACAIADAFNLPSSHLRPITD----SPV--- 258 (315)
T ss_dssp C--SSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCS-CCBCHHHHHHHHHHHTTCCCTTEEEECS----CCC---
T ss_pred c--CceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCC-CcccHHHHHHHHHHHhCCChhheecccc----ccc---
Confidence 3 57889999999999999998753 1135789999997 799999999999999997643 112221 000
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
..........+|++|+++. ||+|.++++++|+++++||+++.
T Consensus 259 --~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~ 300 (315)
T 2ydy_A 259 --LGAQRPRNAQLDCSKLETL-GIGQRTPFRIGIKESLWPFLIDK 300 (315)
T ss_dssp --SSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHHHHHHGGGCC--
T ss_pred --cccCCCcccccchHHHHhc-CCCCCCCHHHHHHHHHHHHccch
Confidence 0112234567999999887 99999999999999999998874
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-41 Score=305.30 Aligned_cols=275 Identities=15% Similarity=0.112 Sum_probs=217.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|||||| ||||++|+++|+++ |++|++++|++.....+.. .+++++.+|+.|.+ +.++|+|||+
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----~~~~d~vi~~ 70 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQ-GWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----LDGVTHLLIS 70 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGG-TCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHC-CCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----cCCCCEEEEC
Confidence 579999998 99999999999999 9999999998876554432 47999999999954 6789999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHh--CC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSE--NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
|+..... + ..+.++++++++ .+ ++|||+||.++||...+.+++|+.+..
T Consensus 71 a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~--------------- 122 (286)
T 3ius_A 71 TAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLT--------------- 122 (286)
T ss_dssp CCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCC---------------
T ss_pred CCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCC---------------
Confidence 9976421 1 125788999988 55 899999999999988777777777653
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
|.+.|+.+|+.+|.+++.+ .+++++++||+.+|||+... +..+..+.++.+.
T Consensus 123 -------p~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~------------------~~~~~~~~~~~~~ 174 (286)
T 3ius_A 123 -------PTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP------------------FSKLGKGGIRRII 174 (286)
T ss_dssp -------CCSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS------------------STTSSSSCCCEEE
T ss_pred -------CCCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchH------------------HHHHhcCCccccC
Confidence 5678999999999999876 58999999999999998651 1344567777777
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCC
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGE 333 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
++ .+.++|+|++|+|++++.+++++. .+++||++++ +.+|+.|+++.+.+.+|.+...... ....... ...
T Consensus 175 ~~-~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~-~~~~~~~--~~~-- 245 (286)
T 3ius_A 175 KP-GQVFSRIHVEDIAQVLAASMARPD--PGAVYNVCDD-EPVPPQDVIAYAAELQGLPLPPAVD-FDKADLT--PMA-- 245 (286)
T ss_dssp CT-TCCBCEEEHHHHHHHHHHHHHSCC--TTCEEEECCS-CCBCHHHHHHHHHHHHTCCCCCEEE-GGGSCCC--HHH--
T ss_pred CC-CcccceEEHHHHHHHHHHHHhCCC--CCCEEEEeCC-CCccHHHHHHHHHHHcCCCCCcccc-hhhhccC--hhH--
Confidence 55 578999999999999999999875 6789999997 7999999999999999976432211 1110000 000
Q ss_pred CCCCCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHHH
Q 016370 334 GYDDSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLTY 370 (390)
Q Consensus 334 ~~~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~ 370 (390)
.........+|++|+++.|||+|++ +++++|+++++.
T Consensus 246 ~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 246 RSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp HHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred HHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence 0001245678999999999999999 799999998763
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=310.68 Aligned_cols=307 Identities=15% Similarity=0.141 Sum_probs=232.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC-----CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP-----HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
+|+|||||||||||++|+++|+++ | ++|++++|++.... . ...+++++.+|+.|.+.+.+++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~-g~~~~~~~V~~~~r~~~~~~-~-------~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLA-DTPGGPWKVYGVARRTRPAW-H-------EDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTST-TCTTCSEEEEEEESSCCCSC-C-------CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCCCCceEEEEEeCCCCccc-c-------ccCceEEEEeecCCHHHHHHHHhcCC
Confidence 479999999999999999999998 8 99999999875433 1 124789999999999999999998
Q ss_pred -ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC--C-CcEE-------Eeeccccccccc--CCCCCCCCC
Q 016370 90 -ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN--N-KRLI-------HFSTCEVYGKTI--GSFLPKDSP 156 (390)
Q Consensus 90 -~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~-~~~v-------~~Ss~~vy~~~~--~~~~~e~~~ 156 (390)
+|+|||+|+... .++...+++|+.++.+++++|++. + ++|| |+||.++||... ..+++|+.+
T Consensus 72 ~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~ 146 (364)
T 2v6g_A 72 DVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP 146 (364)
T ss_dssp TCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred CCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence 999999999652 357788999999999999999998 6 8887 899999998752 345556554
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC-ccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG-LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
..+ +.+.| ..+|.+++.+++.++ ++++++||+.+|||+.. .....
T Consensus 147 ~~~---------------------~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~---------~~~~~ 192 (364)
T 2v6g_A 147 RLK---------------------YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPY---------SMMNL 192 (364)
T ss_dssp CCS---------------------SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTT---------CSSCH
T ss_pred CCc---------------------cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCC---------cccch
Confidence 321 23467 358999988877776 99999999999999764 11122
Q ss_pred hHHH-HHHHH--hcCCCeEEecCC---cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHh
Q 016370 236 VLAC-FSNNL--LRRQPLKLVDGG---QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309 (390)
Q Consensus 236 ~~~~-~~~~~--~~~~~~~~~~~~---~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~ 309 (390)
++.. ++..+ ..+.++.+.+++ ....++++++|+|++++.+++++. ..+++||++++ +.+|+.|+++.+.+.+
T Consensus 193 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-~~g~~~ni~~~-~~~s~~e~~~~i~~~~ 270 (364)
T 2v6g_A 193 VGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY-AKNEAFNVSNG-DVFKWKHFWKVLAEQF 270 (364)
T ss_dssp HHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG-GTTEEEEECCS-CCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC-CCCceEEecCC-CcCCHHHHHHHHHHHh
Confidence 3333 23333 367777777776 345788899999999999999864 35789999997 7899999999999999
Q ss_pred hcccCCc--ccCCCcccCCcc----------c--ccCCCCCC-----------CCC-CcCcHHHHHHhcCcccccCHHHH
Q 016370 310 AKVSGEA--ALEEPTVDVSSK----------E--FYGEGYDD-----------SDK-RIPDMTIINQQLGWNPKTSLWDL 363 (390)
Q Consensus 310 g~~~~~~--~~~~~~~~~~~~----------~--~~~~~~~~-----------~~~-~~~d~~k~~~~lg~~p~~~~~~~ 363 (390)
|.+.... ..+.+....... . +....... ... ..+|++|+++ |||+|.++++++
T Consensus 271 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~ 349 (364)
T 2v6g_A 271 GVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNA 349 (364)
T ss_dssp TCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHH
T ss_pred CCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHH
Confidence 9765433 333221100000 0 00000000 134 5799999987 999999999999
Q ss_pred HHHHHHHHHHh
Q 016370 364 LESTLTYQHRT 374 (390)
Q Consensus 364 l~~~~~~~~~~ 374 (390)
|+++++||+++
T Consensus 350 l~~~~~~~~~~ 360 (364)
T 2v6g_A 350 FISWIDKAKAY 360 (364)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999999865
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=311.42 Aligned_cols=321 Identities=14% Similarity=0.099 Sum_probs=233.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEE-eCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH-RLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~-~~D~~d~~~~~~~~~~~d~V 93 (390)
+++|+||||||+||||++|+++|+++ |++|++++|+.+....+..........+++++ .+|++|.+.+.++++++|+|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 56789999999999999999999999 99999999986554332211000012478888 89999999999999999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHh-CC-CcEEEeecccccccccC----CCCCCCCCCCCCccccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE-NN-KRLIHFSTCEVYGKTIG----SFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~-~~~v~~Ss~~vy~~~~~----~~~~e~~~~~~~~~~~~~~ 167 (390)
||+|+.... ..++...+++|+.++.+++++|.+ .+ ++|||+||.++|+.... .+++|+...... ..
T Consensus 88 ih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~-----~~ 159 (342)
T 1y1p_A 88 AHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLES-----ID 159 (342)
T ss_dssp EECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHH-----HH
T ss_pred EEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchh-----hh
Confidence 999997643 246778899999999999999985 55 89999999999864321 334444311000 00
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
+...+. ......|.+.|+.+|..+|.+++.+++++ +++++++||+.+|||.... ... ...+..++..+.
T Consensus 160 ~~~~~~-~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~-------~~~-~~~~~~~~~~~~ 230 (342)
T 1y1p_A 160 KAKTLP-ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP-------ETQ-SGSTSGWMMSLF 230 (342)
T ss_dssp HHHHSC-TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCT-------TTC-CCHHHHHHHHHH
T ss_pred hhcccc-ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCC-------CCC-CccHHHHHHHHH
Confidence 000000 00011356789999999999999987765 7899999999999997651 100 126777888888
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
.+.++.+.+++ +.++|+|++|+|++++.+++++. ..++.+. +++ ..+|+.|+++.+.+.+|.. .. +.. ..
T Consensus 231 ~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~~-~~g-~~~s~~e~~~~i~~~~~~~-~~-~~~--~~-- 300 (342)
T 1y1p_A 231 NGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQ-IERRRVY-GTA-GTFDWNTVLATFRKLYPSK-TF-PAD--FP-- 300 (342)
T ss_dssp TTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTT-CCSCEEE-ECC-EEECHHHHHHHHHHHCTTS-CC-CCC--CC--
T ss_pred cCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcc-cCCceEE-EeC-CCCCHHHHHHHHHHHCCCc-cC-CCC--CC--
Confidence 88887666665 67899999999999999998753 2454454 444 5899999999999999864 11 111 00
Q ss_pred CcccccCCCCCCCCCCcCcHHHHHHhcCc---ccccCHHHHHHHHHHHHH
Q 016370 326 SSKEFYGEGYDDSDKRIPDMTIINQQLGW---NPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~d~~k~~~~lg~---~p~~~~~~~l~~~~~~~~ 372 (390)
. .......+|++|+++.||| .+.++++++|+++++||+
T Consensus 301 -------~--~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 301 -------D--QGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp -------C--CCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred -------c--cccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 0 0112366899999999987 466799999999999874
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=308.91 Aligned_cols=312 Identities=18% Similarity=0.269 Sum_probs=213.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
+|+||||||+||||++|+++|+++ |++|+++.|+.+...............+++++.+|++|.+.+.++++++|+|||+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK-GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT-TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 579999999999999999999999 9999998887643211100000000246889999999999999999999999999
Q ss_pred ccccCCccccCChh-HHHHHhhhhHHHHHHHHHhCC--CcEEEeeccc-cccccc-C--CCCCCCCCCCCCccccccccC
Q 016370 97 AAICTPADYNTRPL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCE-VYGKTI-G--SFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 97 a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~-vy~~~~-~--~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+.... ...++. ..+++|+.++.+++++|++.+ +||||+||.+ +|+... . .+++|+.+...+.
T Consensus 88 A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~-------- 157 (338)
T 2rh8_A 88 ATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEF-------- 157 (338)
T ss_dssp SSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC----------
T ss_pred CCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhh--------
Confidence 986532 223333 378899999999999999874 8999999987 444321 1 2455544321100
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
..+...+.+.|+.+|.++|.+++.+.+.+|++++++||+.+|||+... .....+..+. ....+.+
T Consensus 158 -----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~---------~~~~~~~~~~-~~~~g~~ 222 (338)
T 2rh8_A 158 -----LTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTS---------DVPSSIGLAM-SLITGNE 222 (338)
T ss_dssp ----------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSS---------SCCHHHHHHH-HHHHTCH
T ss_pred -----ccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC---------CCCchHHHHH-HHHcCCc
Confidence 001111223699999999999999877779999999999999997641 1222222222 2233333
Q ss_pred eEEecC------CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 250 LKLVDG------GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 250 ~~~~~~------~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
. ..+. +...++|+|++|+|++++.+++++. .++.||++++ .+|+.|+++.+.+.++... .+....
T Consensus 223 ~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~--~~s~~e~~~~l~~~~~~~~----~~~~~~ 293 (338)
T 2rh8_A 223 F-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGRYICCAA--NTSVPELAKFLSKRYPQYK----VPTDFG 293 (338)
T ss_dssp H-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEEEEECSE--EECHHHHHHHHHHHCTTSC----CCCCCT
T ss_pred c-ccccccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCcEEEecC--CCCHHHHHHHHHHhCCCCC----CCCCCC
Confidence 2 1111 1123589999999999999998753 3568988773 6999999999998765211 111100
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
. . .......+|++|+ ++|||+|+++++|+|+++++|++++
T Consensus 294 ~---------~-~~~~~~~~d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 294 D---------F-PPKSKLIISSEKL-VKEGFSFKYGIEEIYDESVEYFKAK 333 (338)
T ss_dssp T---------S-CSSCSCCCCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHT
T ss_pred C---------C-CcCcceeechHHH-HHhCCCCCCCHHHHHHHHHHHHHHc
Confidence 0 0 1112367899999 6799999999999999999999765
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=300.97 Aligned_cols=311 Identities=19% Similarity=0.277 Sum_probs=216.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh---ccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+|+||||||+||||++|+++|+++ |++|+++.|+.+... .+..... ...+++++.+|++|.+.+.++++++|+
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPTNVKKVKHLLDLPK--AETHLTLWKADLADEGSFDEAIKGCTG 80 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCTTCHHHHHHHHTSTT--HHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEECCcchhHHHHHHHhccc--CCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence 4689999999999999999999999 999999998765321 1111100 012588999999999999999999999
Q ss_pred EEEeccccCCccccCChh-HHHHHhhhhHHHHHHHHHhCC--CcEEEeeccc-cccccc-CCCCCCCCCCCCCccccccc
Q 016370 93 TINLAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCE-VYGKTI-GSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~-vy~~~~-~~~~~e~~~~~~~~~~~~~~ 167 (390)
|||+|+... ....++. ..+++|+.++.+++++|++.+ +||||+||.+ +|+... ..+++|+.+...+
T Consensus 81 Vih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~------- 151 (337)
T 2c29_D 81 VFHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDME------- 151 (337)
T ss_dssp EEECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHH-------
T ss_pred EEEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchh-------
Confidence 999998652 2223444 478899999999999998865 7999999987 454322 2233443321100
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
...+...|.+.|+.+|.++|.+++.+.+.++++++++||+.+|||+... .....+.... ....+
T Consensus 152 ------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~---------~~~~~~~~~~-~~~~g 215 (337)
T 2c29_D 152 ------FCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS---------SMPPSLITAL-SPITG 215 (337)
T ss_dssp ------HHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS---------SCCHHHHHHT-HHHHT
T ss_pred ------hhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC---------CCCchHHHHH-HHHcC
Confidence 0000001455799999999999998877789999999999999997541 1112221111 11223
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCc
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS 327 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~ 327 (390)
.+. ..+.+ ....|+|++|+|++++.+++++. .++.|++++ ..+|+.|+++.+.+.++... .+....
T Consensus 216 ~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~--~~~s~~e~~~~i~~~~~~~~----~~~~~~---- 281 (337)
T 2c29_D 216 NEA-HYSII-RQGQFVHLDDLCNAHIYLFENPK--AEGRYICSS--HDCIILDLAKMLREKYPEYN----IPTEFK---- 281 (337)
T ss_dssp CGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTT--CCEEEEECC--EEEEHHHHHHHHHHHCTTSC----CCSCCT----
T ss_pred CCc-ccccc-CCCCEEEHHHHHHHHHHHhcCcc--cCceEEEeC--CCCCHHHHHHHHHHHCCCcc----CCCCCC----
Confidence 322 12221 23459999999999999998753 356787766 36899999999998764211 111100
Q ss_pred ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 328 KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 328 ~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
. .........+|++|+ ++|||+|+++++++|+++++|++++
T Consensus 282 ----~-~~~~~~~~~~d~~k~-~~lG~~p~~~l~e~l~~~~~~~~~~ 322 (337)
T 2c29_D 282 ----G-VDENLKSVCFSSKKL-TDLGFEFKYSLEDMFTGAVDTCRAK 322 (337)
T ss_dssp ----T-CCTTCCCCEECCHHH-HHHTCCCCCCHHHHHHHHHHHHHHT
T ss_pred ----c-ccCCCccccccHHHH-HHcCCCcCCCHHHHHHHHHHHHHHc
Confidence 0 001234567899999 7899999999999999999999865
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=294.51 Aligned_cols=309 Identities=16% Similarity=0.225 Sum_probs=210.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhh---ccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIK---HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~---~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+|+|||||||||||++|+++|+++ |++|+++.| ++.... .+..... ...+++++.+|++|.+.+.++++++|+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 77 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLEN-GYSVNTTIRADPERKRDVSFLTNLPG--ASEKLHFFNADLSNPDSFAAAIEGCVG 77 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCCC----CCCHHHHTSTT--HHHHEEECCCCTTCGGGGHHHHTTCSE
T ss_pred CCEEEEECChhHHHHHHHHHHHHC-CCEEEEEEeCCccchhHHHHHHhhhc--cCCceEEEecCCCCHHHHHHHHcCCCE
Confidence 478999999999999999999999 999999988 542211 1111000 012578899999999999999999999
Q ss_pred EEEeccccCCccccCCh-hHHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccccc-cccc-CCCCCCCCCCCCCccccccc
Q 016370 93 TINLAAICTPADYNTRP-LDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVY-GKTI-GSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~vy-~~~~-~~~~~e~~~~~~~~~~~~~~ 167 (390)
|||+|+... ....++ ...+++|+.++.+++++|.+. + ++|||+||.+++ +... ..+++|+.+...+
T Consensus 78 vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~------- 148 (322)
T 2p4h_X 78 IFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVD------- 148 (322)
T ss_dssp EEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHH-------
T ss_pred EEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchh-------
Confidence 999997542 222233 347889999999999999988 6 899999998754 3221 1233333221100
Q ss_pred cCCCCcccCCCCCCC-chhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 168 EDASPCIFGSIEKQR-WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 168 e~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
......|. +.|+.+|.++|.+++.+++.++++++++||+.+|||+... .....+..+. ....
T Consensus 149 -------~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~---------~~~~~~~~~~-~~~~ 211 (322)
T 2p4h_X 149 -------LLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCP---------KLPDSIEKAL-VLVL 211 (322)
T ss_dssp -------HHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSS---------SCCHHHHHHT-HHHH
T ss_pred -------hhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCC---------CCCchHHHHH-HHHh
Confidence 00000122 2699999999999999887789999999999999997541 1112222221 2233
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+.+..+ +. ..++|+|++|+|++++.+++.+. ..+ .|| +++ +.+|+.|+++.+.+.++.. ..+...
T Consensus 212 g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~-~~g-~~~-~~~-~~~s~~e~~~~i~~~~~~~----~~~~~~---- 276 (322)
T 2p4h_X 212 GKKEQI-GV--TRFHMVHVDDVARAHIYLLENSV-PGG-RYN-CSP-FIVPIEEMSQLLSAKYPEY----QILTVD---- 276 (322)
T ss_dssp SCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCC-CCE-EEE-CCC-EEEEHHHHHHHHHHHCTTS----CCCCTT----
T ss_pred CCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcC-CCC-CEE-EcC-CCCCHHHHHHHHHHhCCCC----CCCCCc----
Confidence 433322 22 34599999999999999998753 234 599 454 6899999999998876421 111110
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
.+... .......+|++|+ ++|||+|+++++++|+++++|++++
T Consensus 277 --~~~~~--~~~~~~~~d~~k~-~~lG~~p~~~~~~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 277 --ELKEI--KGARLPDLNTKKL-VDAGFDFKYTIEDMFDDAIQCCKEK 319 (322)
T ss_dssp --TTTTC--CCEECCEECCHHH-HHTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred --cccCC--CCCcceecccHHH-HHhCCccCCCHHHHHHHHHHHHHhc
Confidence 00000 1113567899999 6799999999999999999999764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=292.59 Aligned_cols=283 Identities=14% Similarity=0.087 Sum_probs=210.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||||||||||||++|+++|+++ ||+|++++|++... . +...+.....+.++|+|||+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G~~V~~l~R~~~~~-------------~-------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-GHEVTLVSRKPGPG-------------R-------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTT-------------E-------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCcC-------------e-------eecchhhHhhccCCCEEEEec
Confidence 78999999999999999999999 99999999975321 1 111233455677899999999
Q ss_pred cccCCc---c-ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 98 AICTPA---D-YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 98 ~~~~~~---~-~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
+..... . ........++.|+.+|.+|+++++..+ ++||++||.++||.....+.+|++|..
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~------------ 127 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGG------------ 127 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCS------------
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcc------------
Confidence 854211 1 122344577889999999999998887 458999999999998888888887764
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
|.+.|+..|...|... .....+++++++|++.+|||+.+ .+..+......+...
T Consensus 128 ----------~~~~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~--------------~~~~~~~~~~~~~~~ 181 (298)
T 4b4o_A 128 ----------DFDFFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGG--------------AMGHMLLPFRLGLGG 181 (298)
T ss_dssp ----------CSSHHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTSH--------------HHHHHHHHHHTTCCC
T ss_pred ----------ccchhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCCC--------------chhHHHHHHhcCCcc
Confidence 4456777777777543 34567899999999999999754 555566555555443
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccc
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (390)
..|++++.++|||++|+|+++..+++++. ..++||++++ +++|+.|+++.+++.+|++.. .++|..... ..
T Consensus 182 -~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--~~g~yn~~~~-~~~t~~e~~~~ia~~lgrp~~-~pvP~~~~~----~~ 252 (298)
T 4b4o_A 182 -PIGSGHQFFPWIHIGDLAGILTHALEANH--VHGVLNGVAP-SSATNAEFAQTFGAALGRRAF-IPLPSAVVQ----AV 252 (298)
T ss_dssp -CBTTSCSBCCEEEHHHHHHHHHHHHHCTT--CCEEEEESCS-CCCBHHHHHHHHHHHHTCCCC-CCBCHHHHH----HH
T ss_pred -eecccCceeecCcHHHHHHHHHHHHhCCC--CCCeEEEECC-CccCHHHHHHHHHHHhCcCCc-ccCCHHHHH----HH
Confidence 45889999999999999999999999875 4679999997 799999999999999997543 222221111 00
Q ss_pred cC-CCC-CCCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHH
Q 016370 331 YG-EGY-DDSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLT 369 (390)
Q Consensus 331 ~~-~~~-~~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~ 369 (390)
++ +.. .......++++|+ +++||++++ +++++|++.++
T Consensus 253 ~g~~~~~~~l~~~rv~~~kl-~~~Gf~f~yp~l~~al~~l~~ 293 (298)
T 4b4o_A 253 FGRQRAIMLLEGQKVIPRRT-LATGYQYSFPELGAALKEIAE 293 (298)
T ss_dssp HCHHHHHHHHCCCCBCCHHH-HHTTCCCSCCSHHHHHHHHHH
T ss_pred hcchhHHHhhCCCEEcHHHH-HHCCCCCCCCCHHHHHHHHHH
Confidence 11 000 0001223567888 468999998 69999999887
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=307.31 Aligned_cols=289 Identities=14% Similarity=0.136 Sum_probs=210.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|||||||||||++|++.|+++ |++|++++|++... ..+.+|+.+. +..++.++|+|||+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~-G~~V~~l~R~~~~~---------------~~v~~d~~~~--~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG-GHEVIQLVRKEPKP---------------GKRFWDPLNP--ASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSSCCT---------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCc---------------cceeecccch--hHHhcCCCCEEEEC
Confidence 789999999999999999999999 99999999986532 1256777643 45667789999999
Q ss_pred ccccCCcc-ccCChhHHHHHhhhhHHHHHHH-HHhCC-CcEEEeecccccc-cccCCCCCCCCCCCCCccccccccCCCC
Q 016370 97 AAICTPAD-YNTRPLDTIYSNFIDALPVVKY-CSENN-KRLIHFSTCEVYG-KTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 97 a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~-~~~~~-~~~v~~Ss~~vy~-~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
|+...... ...++...+++|+.++.+|+++ +++.+ ++|||+||.++|| .....+++|+.+.
T Consensus 209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~--------------- 273 (516)
T 3oh8_A 209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES--------------- 273 (516)
T ss_dssp CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC---------------
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC---------------
Confidence 99864422 3345667889999999999999 56666 8999999999999 4445566666654
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
|.+.|+.+|...|..+... +..|++++++||+.+|||+.+ ++..+...+..+... .
T Consensus 274 --------~~~~y~~~~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~~--------------~~~~~~~~~~~g~~~-~ 329 (516)
T 3oh8_A 274 --------GDDFLAEVCRDWEHATAPA-SDAGKRVAFIRTGVALSGRGG--------------MLPLLKTLFSTGLGG-K 329 (516)
T ss_dssp --------CSSHHHHHHHHHHHTTHHH-HHTTCEEEEEEECEEEBTTBS--------------HHHHHHHTTC---CC-C
T ss_pred --------CcChHHHHHHHHHHHHHHH-HhCCCCEEEEEeeEEECCCCC--------------hHHHHHHHHHhCCCc-c
Confidence 4457999999999876543 567999999999999999743 566666666655543 5
Q ss_pred ecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccC
Q 016370 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYG 332 (390)
Q Consensus 253 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 332 (390)
.+++.+.++|||++|+|++++.+++++. .+++||++++ +.+|+.|+++.+.+.+|.+. ....+...... ..+
T Consensus 330 ~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g~~ni~~~-~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~----~~g 401 (516)
T 3oh8_A 330 FGDGTSWFSWIAIDDLTDIYYRAIVDAQ--ISGPINAVAP-NPVSNADMTKILATSMHRPA-FIQIPSLGPKI----LLG 401 (516)
T ss_dssp CTTSCCEECEEEHHHHHHHHHHHHHCTT--CCEEEEESCS-CCEEHHHHHHHTTC-------------------------
T ss_pred cCCCCceEceEeHHHHHHHHHHHHhCcc--cCCcEEEECC-CCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHH----HhC
Confidence 6788899999999999999999999874 4679999997 79999999999999999764 22222221111 001
Q ss_pred CC---CCCCCCCcCcHHHHHHhcCcccccC-HHHHHHHHHHHH
Q 016370 333 EG---YDDSDKRIPDMTIINQQLGWNPKTS-LWDLLESTLTYQ 371 (390)
Q Consensus 333 ~~---~~~~~~~~~d~~k~~~~lg~~p~~~-~~~~l~~~~~~~ 371 (390)
.. ........++++|++ +|||+|+++ ++++|++++++.
T Consensus 402 ~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 402 SQGAEELALASQRTAPAALE-NLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp -CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHHHHHHHTCC
T ss_pred CchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHHHHHHhCcc
Confidence 00 011123356789996 799999997 999999998764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=277.23 Aligned_cols=269 Identities=16% Similarity=0.144 Sum_probs=213.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|+|||||||||||++++++|+ + |++|++++|++... .+ +.+|++|.+.+.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r~~~~~------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E-RHEVIKVYNSSEIQ------------GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T-TSCEEEEESSSCCT------------TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-c-CCeEEEecCCCcCC------------CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 589999999999999999999 5 79999999986311 12 78999999999999987 999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+|+.........++...+++|+.++.+++++|++.+.+|||+||..+|+...+ +++|+.+.
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~~~~------------------ 124 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEEDIP------------------ 124 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTTSCC------------------
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCCCCC------------------
Confidence 99976543334567788999999999999999988789999999999987643 55555543
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
.|.+.|+.+|..+|.+++. ++++++||+.+||+. .+...++..+..+.++.+.++
T Consensus 125 ----~~~~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~~---------------~~~~~~~~~~~~~~~~~~~~~ 179 (273)
T 2ggs_A 125 ----NPINYYGLSKLLGETFALQ------DDSLIIRTSGIFRNK---------------GFPIYVYKTLKEGKTVFAFKG 179 (273)
T ss_dssp ----CCSSHHHHHHHHHHHHHCC------TTCEEEEECCCBSSS---------------SHHHHHHHHHHTTCCEEEESC
T ss_pred ----CCCCHHHHHHHHHHHHHhC------CCeEEEecccccccc---------------HHHHHHHHHHHcCCCEEeecC
Confidence 2556899999999999854 678999999999831 255566667777888877754
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGY 335 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
.++++|++|+|++++.+++++. +++||+++ +.+|+.|+++.+.+.+|.+....... ... .+ ..
T Consensus 180 ---~~~~~~~~dva~~i~~~~~~~~---~g~~~i~~--~~~s~~e~~~~~~~~~g~~~~~~~~~-~~~-----~~---~~ 242 (273)
T 2ggs_A 180 ---YYSPISARKLASAILELLELRK---TGIIHVAG--ERISRFELALKIKEKFNLPGEVKEVD-EVR-----GW---IA 242 (273)
T ss_dssp ---EECCCBHHHHHHHHHHHHHHTC---CEEEECCC--CCEEHHHHHHHHHHHTTCCSCEEEES-SCT-----TC---CS
T ss_pred ---CCCceEHHHHHHHHHHHHhcCc---CCeEEECC--CcccHHHHHHHHHHHhCCChhhcccc-ccc-----cc---cc
Confidence 7899999999999999998752 56999998 49999999999999999765432111 110 00 11
Q ss_pred CCCCCCcCcHHHHHHhcCccc-ccCHHHHH
Q 016370 336 DDSDKRIPDMTIINQQLGWNP-KTSLWDLL 364 (390)
Q Consensus 336 ~~~~~~~~d~~k~~~~lg~~p-~~~~~~~l 364 (390)
.......+|++|++++|||+| .++++++|
T Consensus 243 ~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 243 KRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp CCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred CCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 223457899999999999999 57888765
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=289.55 Aligned_cols=327 Identities=17% Similarity=0.121 Sum_probs=226.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh---cccccc--------ccCCCCCeeEEeCCCCChhH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---HLLEPE--------SQTGADRIQFHRLNIKHDSR 82 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~---~~~~~~--------~~~~~~~i~~~~~D~~d~~~ 82 (390)
+..+|+|||||||||||++|+++|+++ |++|++++|++.... .+.... ......++.++.+|+.|.+.
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGY-SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTT-EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcC-CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 456789999999999999999999887 999999999876221 111000 00012589999999999887
Q ss_pred HHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccccc-----CCCCCCCCCC
Q 016370 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTI-----GSFLPKDSPL 157 (390)
Q Consensus 83 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----~~~~~e~~~~ 157 (390)
+. .+.++|+|||+|+... ...++...+++|+.++.+++++|.+.+++|||+||.++ |... ..+++|+.+.
T Consensus 145 l~-~~~~~d~Vih~A~~~~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~ 219 (427)
T 4f6c_A 145 VV-LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVY 219 (427)
T ss_dssp CC-CSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSC
T ss_pred CC-CcCCCCEEEECCcccC---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccc
Confidence 87 7778999999999874 33456678899999999999999994499999999998 5432 2334444332
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
. ...|.+.|+.+|+.+|.+++.+. +.|++++++||+.||||...... .......++
T Consensus 220 ~-------------------~~~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~----~~~~~~~~~ 275 (427)
T 4f6c_A 220 K-------------------GQLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWH----MRNIKTNRF 275 (427)
T ss_dssp S-------------------SCCCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCC----CTTGGGCHH
T ss_pred c-------------------CCCCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCcc----ccCcchHHH
Confidence 1 11367799999999999999975 46899999999999999765100 001122456
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcc
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~ 317 (390)
..++.....+.+++. +.++..++|++++|+|++++.++..+. .+++||++++ +.+++.|+++.+.+ ++. ....
T Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~-~~~s~~el~~~i~~-~g~--~~~~ 348 (427)
T 4f6c_A 276 SMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSP-NKMPVKSLLECVKR-KEI--ELVS 348 (427)
T ss_dssp HHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC--CCSEEEESCS-CCEEHHHHHHHHHS-SCC--EEEC
T ss_pred HHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCC-CCCcHHHHHHHHHH-cCC--cccC
Confidence 777888888877765 345789999999999999999999875 6889999997 79999999999998 451 1111
Q ss_pred cCCCcccCC---cccccCC--CCCCCCCCcCcHHHHH---HhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 318 LEEPTVDVS---SKEFYGE--GYDDSDKRIPDMTIIN---QQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 318 ~~~~~~~~~---~~~~~~~--~~~~~~~~~~d~~k~~---~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
.+.+..... ...+... .........+|+++.. +.+||.+...-++.++++++|+++.+.+
T Consensus 349 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~~ 416 (427)
T 4f6c_A 349 DESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNK 416 (427)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 110000000 0000000 0001124456777766 5569987766677999999999988654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=273.77 Aligned_cols=239 Identities=21% Similarity=0.282 Sum_probs=199.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+++|+||||||||+||++|+++|+++.|+ +|++++|++.....+.... ...+++++.+|++|.+.+.++++++|+
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF---NDPRMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH---CCTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhcCCE
Confidence 367789999999999999999999998455 9999999876544332111 025899999999999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
|||+||......+..++...+++|+.++.+++++|.+.+ ++||++||...+.
T Consensus 95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------------------------- 147 (344)
T 2gn4_A 95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------------------------- 147 (344)
T ss_dssp EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS---------------------------
T ss_pred EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC---------------------------
Confidence 999999876444455678899999999999999999999 8999999976531
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
|.+.|+.+|.++|.+++.+.+. .+++++++||+++|||... +++.+..++..+.
T Consensus 148 ---------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~--------------~i~~~~~~~~~g~ 204 (344)
T 2gn4_A 148 ---------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS--------------VVPFFKKLVQNKA 204 (344)
T ss_dssp ---------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS--------------HHHHHHHHHHHTC
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC--------------HHHHHHHHHHcCC
Confidence 3347999999999999988754 5799999999999998753 6677778888888
Q ss_pred -CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhh
Q 016370 249 -PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310 (390)
Q Consensus 249 -~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g 310 (390)
++.+. ++...++|+|++|+|++++.++++.. .+++||+.++ .+++.|+++.+.+.++
T Consensus 205 ~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~--~g~~~~~~~~--~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 205 SEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH--GGEIFVPKIP--SMKMTDLAKALAPNTP 262 (344)
T ss_dssp CCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC--SSCEEEECCC--EEEHHHHHHHHCTTCC
T ss_pred CceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc--CCCEEecCCC--cEEHHHHHHHHHHhCC
Confidence 78776 67788999999999999999999763 5789999885 6999999999987554
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=284.35 Aligned_cols=278 Identities=15% Similarity=0.115 Sum_probs=206.3
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhC--CCeEEEEecCChhhhcccccccc--------------CCCCCeeEEeC
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLET--PHKILALDVYNDKIKHLLEPESQ--------------TGADRIQFHRL 75 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~i~~~~~ 75 (390)
.....+|+|||||||||||++|+++|++++ |++|++++|+........+.... ....+++++.+
T Consensus 68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 344678999999999999999999999985 69999999987543221110000 01258999999
Q ss_pred CCC------ChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC
Q 016370 76 NIK------HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG 148 (390)
Q Consensus 76 D~~------d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~ 148 (390)
|++ |.+.+..+++++|+|||+|+.... .++...+++|+.++.+++++|.+.+ ++|||+||.++|+....
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~ 223 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP 223 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred ECCCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence 998 667899999999999999998753 4555788999999999999999998 89999999999998766
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.+++|+.+..+.... .. ......+.|+.+|+.+|.+++.++++.+++++++||+.|||+....
T Consensus 224 ~~~~E~~~~~p~~~~---~~--------~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~------ 286 (478)
T 4dqv_A 224 SAFTEDADIRVISPT---RT--------VDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYA------ 286 (478)
T ss_dssp TTCCSSSCHHHHCCE---EE--------CCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSS------
T ss_pred CCcCCcccccccCcc---cc--------cccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccC------
Confidence 666666543211000 00 0001235699999999999999988789999999999999986420
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEE--ec---C---CcceeeeeeHHHHHHHHHHHHhC----CCCCCCceEEecCCCCc-
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKL--VD---G---GQSQRTFIYIKDAIEAVLLMIEN----PARANGHIFNVGNPHNE- 295 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~--~~---~---~~~~~~~i~v~D~a~~~~~~l~~----~~~~~~~~~nv~~~~~~- 295 (390)
.......++..++......+.++. .+ + ++..++|+|++|+|++++.++.+ +. ..+++||++++ +.
T Consensus 287 g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~-~~~~~ynv~~~-~~~ 364 (478)
T 4dqv_A 287 GQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL-AGFATYHVMNP-HDD 364 (478)
T ss_dssp SCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC-CSEEEEEESCC-CCS
T ss_pred CcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCC-CCCceEEecCC-CCC
Confidence 001223456666655544333221 11 1 15788999999999999999986 22 35789999997 67
Q ss_pred -ccHHHHHHHHHHHhhccc
Q 016370 296 -VTVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 296 -~s~~~l~~~i~~~~g~~~ 313 (390)
+|+.|+++.+.+. |.+.
T Consensus 365 ~~s~~el~~~l~~~-g~~~ 382 (478)
T 4dqv_A 365 GIGLDEYVDWLIEA-GYPI 382 (478)
T ss_dssp SCSHHHHHHHHHHT-TCSC
T ss_pred CcCHHHHHHHHHHc-CCCc
Confidence 9999999999995 6543
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=273.17 Aligned_cols=273 Identities=13% Similarity=0.129 Sum_probs=204.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE-TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|+|||||||||||++++++|+++ +|++|++++|++.....+.. .+++++.+|+.|.+.+.++++++|+|||+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 73 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------QGVEVRHGDYNQPESLQKAFAGVSKLLFI 73 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------TTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------cCCeEEEeccCCHHHHHHHHhcCCEEEEc
Confidence 57999999999999999999986 47999999998765443321 47889999999999999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|+.. . . . +.|+.++.+++++|++.+ ++|||+||.++|.. +
T Consensus 74 a~~~-~-----~--~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~------------------- 114 (287)
T 2jl1_A 74 SGPH-Y-----D--N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES----------I------------------- 114 (287)
T ss_dssp CCCC-S-----C--H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC----------C-------------------
T ss_pred CCCC-c-----C--c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------C-------------------
Confidence 9852 1 1 1 579999999999999999 89999999887621 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
..|+.+|..+|.+++. .+++++++||+.++|+... .++... +..+. +. .+.
T Consensus 115 -------~~y~~~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~-------------~~~~~~---~~~~~-~~-~~~ 165 (287)
T 2jl1_A 115 -------IPLAHVHLATEYAIRT----TNIPYTFLRNALYTDFFVN-------------EGLRAS---TESGA-IV-TNA 165 (287)
T ss_dssp -------STHHHHHHHHHHHHHH----TTCCEEEEEECCBHHHHSS-------------GGGHHH---HHHTE-EE-ESC
T ss_pred -------CchHHHHHHHHHHHHH----cCCCeEEEECCEeccccch-------------hhHHHH---hhCCc-ee-ccC
Confidence 1599999999999854 5899999999998886411 122222 22232 33 345
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc-------CCcc
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD-------VSSK 328 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~-------~~~~ 328 (390)
+++.++|+|++|+|+++..+++++. ..+++||++++ +.+|+.|+++.+.+.+|.+......+..... .+..
T Consensus 166 ~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T 2jl1_A 166 GSGIVNSVTRNELALAAATVLTEEG-HENKTYNLVSN-QPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEP 243 (287)
T ss_dssp TTCCBCCBCHHHHHHHHHHHHTSSS-CTTEEEEECCS-SCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHH
T ss_pred CCCccCccCHHHHHHHHHHHhcCCC-CCCcEEEecCC-CcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHH
Confidence 6778999999999999999998754 35789999997 7999999999999999976543333321110 0000
Q ss_pred --cccCC--CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHH
Q 016370 329 --EFYGE--GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369 (390)
Q Consensus 329 --~~~~~--~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 369 (390)
..... ..........|++|+++.|| |.++++|+|+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 244 FTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp HHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 00000 00001245678899999999 77899999999875
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=292.41 Aligned_cols=325 Identities=16% Similarity=0.116 Sum_probs=227.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccc---c--------ccCCCCCeeEEeCCCCChhHHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP---E--------SQTGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~---~--------~~~~~~~i~~~~~D~~d~~~~~ 84 (390)
.+|+|||||||||||++|+++|++. |++|++++|.........+. . ......+++++.+|+.+.+.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGY-SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTT-EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCeEEEECCccchHHHHHHHHHhc-CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 4589999999999999999999887 99999999987632111000 0 0001368999999999987777
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccccc-----CCCCCCCCCCCC
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTI-----GSFLPKDSPLRQ 159 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~-----~~~~~e~~~~~~ 159 (390)
+..++|+|||+|+... ...++...+++|+.++.+++++|++.+++|||+||.++ |... ..+++|+.+..
T Consensus 228 -~~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~- 301 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK- 301 (508)
T ss_dssp -CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS-
T ss_pred -CccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccc-
Confidence 7778999999999774 33456678889999999999999994499999999999 4421 22344443321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
...|.+.|+.+|+.+|.+++.+. +.|++++|+||+.||||..+... ........+..
T Consensus 302 ------------------~~~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~ 358 (508)
T 4f6l_B 302 ------------------GQLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWH----MRNIKTNRFSM 358 (508)
T ss_dssp ------------------SBCCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCC----CTTCTTCHHHH
T ss_pred ------------------cccCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcc----cCCcchHHHHH
Confidence 11266789999999999999875 46999999999999999765210 00112335677
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
++......+.++. +++++.++|+|++|+|++++.++..+. .+++||++++ +.+++.|+++.+.+.. . .....+
T Consensus 359 ~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~--~~~~~nl~~~-~~~s~~el~~~i~~~~-~--~~~~~~ 431 (508)
T 4f6l_B 359 VMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSP-NKMPVKSLLECVKRKE-I--ELVSDE 431 (508)
T ss_dssp HHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHHHHTTBCC--SCSEEEESCS-CEEEHHHHHHHHHSSC-C--EEECHH
T ss_pred HHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHHHHHhCCC--CCCEEEeCCC-CCCCHHHHHHHHHHcC-C--cccCHH
Confidence 7888887776665 346789999999999999999999875 6889999997 7999999999999753 1 111111
Q ss_pred CCcccCC---cccccCCC--CCCCCCCcCcHHHHH---HhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 320 EPTVDVS---SKEFYGEG--YDDSDKRIPDMTIIN---QQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 320 ~~~~~~~---~~~~~~~~--~~~~~~~~~d~~k~~---~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
.+..... ...+.+.. ........+|+++.. +.+||.+....++.+++.++|+++.+++
T Consensus 432 ~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~~~ 497 (508)
T 4f6l_B 432 SFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNK 497 (508)
T ss_dssp HHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0000000 00000000 001124456776665 4569987777789999999999998763
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=258.29 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=175.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|||||||||||++|+++|+++ |++|++++|+++....+ ..+++++.+|+.|.+++.++++++|+|||+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 74 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCKGADAVISA 74 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence 589999999999999999999999 99999999987655432 258999999999999999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|+... .+ ...++.|+.++.+++++|++.+ ++|||+||..+|+...+.+. ++.+.
T Consensus 75 a~~~~-----~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-~~~~~------------------ 129 (227)
T 3dhn_A 75 FNPGW-----NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRL-MDSGE------------------ 129 (227)
T ss_dssp CCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEG-GGTTC------------------
T ss_pred CcCCC-----CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCcc-ccCCc------------------
Confidence 98642 11 2367789999999999999999 89999999988766543222 22222
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
.|.+.|+.+|..+|.+++.+.++.+++++++||+.+|||+... . . ...+....+..
T Consensus 130 ----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--------~---~--------~~~~~~~~~~~- 185 (227)
T 3dhn_A 130 ----VPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--------G---R--------YRLGKDDMIVD- 185 (227)
T ss_dssp ----SCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCC--------C---C--------CEEESSBCCCC-
T ss_pred ----chHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccc--------c---c--------eeecCCCcccC-
Confidence 2566899999999999999887889999999999999997641 0 0 11122222222
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHH
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~ 299 (390)
+.. ++|+|++|+|++++.+++++. ..+++|+++++ ++.+++
T Consensus 186 ~~~-~~~i~~~Dva~ai~~~l~~~~-~~g~~~~~~~~-~~~~~~ 226 (227)
T 3dhn_A 186 IVG-NSHISVEDYAAAMIDELEHPK-HHQERFTIGYL-EHHHHH 226 (227)
T ss_dssp TTS-CCEEEHHHHHHHHHHHHHSCC-CCSEEEEEECC-SCCC--
T ss_pred CCC-CcEEeHHHHHHHHHHHHhCcc-ccCcEEEEEee-hhcccC
Confidence 222 899999999999999999976 57899999998 687765
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=276.50 Aligned_cols=217 Identities=20% Similarity=0.258 Sum_probs=188.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|||||||||||||++|+++|+++ |+ +|++++|. .|.+.+.++++++|+|||+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~-g~~~v~~~d~~--------------------------~d~~~l~~~~~~~d~Vih~ 53 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST-TDHHIFEVHRQ--------------------------TKEEELESALLKADFIVHL 53 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-CCCEEEECCTT--------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEECCC--------------------------CCHHHHHHHhccCCEEEEC
Confidence 68999999999999999999999 77 77776552 5778899999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C-cEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
|+...+ .++...++.|+.++.+++++|++.+ + +|||+||..+|+.
T Consensus 54 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~----------------------------- 100 (369)
T 3st7_A 54 AGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQD----------------------------- 100 (369)
T ss_dssp CCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSC-----------------------------
T ss_pred CcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCC-----------------------------
Confidence 997753 3455677889999999999999999 5 8999999999871
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
+.|+.+|..+|.+++.++++.+++++++||+.+|||+... ....++..++..+..+.++.+.
T Consensus 101 --------~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~- 162 (369)
T 3st7_A 101 --------NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKP---------NYNSVIATFCYKIARNEEIQVN- 162 (369)
T ss_dssp --------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT---------TSSCHHHHHHHHHHTTCCCCCS-
T ss_pred --------CCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCC---------CcchHHHHHHHHHHcCCCeEec-
Confidence 2699999999999999988889999999999999997651 1235788889999999887764
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhccc
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~ 313 (390)
+++..++++|++|+|++++.+++++....+++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 163 ~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~-~~~s~~e~~~~~~~~~g~~~ 220 (369)
T 3st7_A 163 DRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNV-FKVTLGEIVDLLYKFKQSRL 220 (369)
T ss_dssp CTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCC-EEEEHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCC-CceeHHHHHHHHHHHhCCCc
Confidence 77889999999999999999999875222789999997 79999999999999999764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=268.82 Aligned_cols=273 Identities=15% Similarity=0.173 Sum_probs=199.1
Q ss_pred EEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 19 TICMIGAGGFIGSHLCEKILLE-TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
+|||||||||||+++++.|+++ +|++|++++|+++....+.. .+++++.+|+.|.+.+.++++++|+|||+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 73 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------QGITVRQADYGDEAALTSALQGVEKLLLIS 73 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------TTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------CCCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 5899999999999999999986 47999999998765433322 378899999999999999999999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+... ..|+.++.+++++|++.+ ++|||+||..+|.. +
T Consensus 74 ~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~-------------------- 111 (286)
T 2zcu_A 74 SSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----------P-------------------- 111 (286)
T ss_dssp --------------------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----------C--------------------
T ss_pred CCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------c--------------------
Confidence 8421 147899999999999988 89999999887610 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
..|+.+|..+|.+++. .+++++++||+.++++.. .++. ....++++. .+++
T Consensus 112 ------~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~--------------~~~~----~~~~~~~~~-~~~~ 162 (286)
T 2zcu_A 112 ------LGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYL--------------ASAP----AALEHGVFI-GAAG 162 (286)
T ss_dssp ------STTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH--------------TTHH----HHHHHTEEE-ESCT
T ss_pred ------chhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH--------------HHhH----HhhcCCcee-ccCC
Confidence 1599999999999864 589999999987665421 1222 222233444 4566
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC-------Ccc-
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV-------SSK- 328 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~-------~~~- 328 (390)
++.++++|++|+|+++..++.++. ..+++||++++ +.+|+.|+++.+.+.+|.+......+...... +..
T Consensus 163 ~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
T 2zcu_A 163 DGKIASATRADYAAAAARVISEAG-HEGKVYELAGD-SAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGL 240 (286)
T ss_dssp TCCBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCS-SCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHH
T ss_pred CCccccccHHHHHHHHHHHhcCCC-CCCceEEEeCC-CcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHH
Confidence 788999999999999999999864 36789999997 79999999999999999765433333211100 000
Q ss_pred -cccCC--CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHH
Q 016370 329 -EFYGE--GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 329 -~~~~~--~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 372 (390)
..... ..........|++|+++.||| |.++++|+|+++++||.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 241 ADMLADSDVGASKGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN 286 (286)
T ss_dssp HHHHHHHHHHHHTTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred HHHHHHHHHHHhCCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence 00000 000012356788999999997 66799999999999873
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=252.37 Aligned_cols=235 Identities=16% Similarity=0.130 Sum_probs=190.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|||||||||||++|+++|+++ |++|++++|++.... ..+++++.+|++|.+.+.++++++|+|||+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 70 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL-AHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVKDCDGIIHL 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT-EEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CceEEEECCCCHHHHHHHHHHHhC-CCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence 468999999999999999999999 899999999764311 136789999999999999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc-CCCCCCCCCCCCCccccccccCCCCcc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI-GSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
|+... ..+....+++|+.++.++++++++.+ ++|||+||..+|+... ..+++|+.+.
T Consensus 71 a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~----------------- 129 (267)
T 3ay3_A 71 GGVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPR----------------- 129 (267)
T ss_dssp CSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCC-----------------
T ss_pred CcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCC-----------------
Confidence 99752 33456788999999999999999988 8999999999998753 3456665554
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
.|.+.|+.+|..+|.+++.+.+..+++++++||+.+|+...
T Consensus 130 -----~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~---------------------------------- 170 (267)
T 3ay3_A 130 -----RPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK---------------------------------- 170 (267)
T ss_dssp -----CCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC----------------------------------
T ss_pred -----CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC----------------------------------
Confidence 25568999999999999998878899999999999984210
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEG 334 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
++...++|+|++|+|+++..+++.+. ...++|++.++ ..
T Consensus 171 ~~~~~~~~~~~~dva~~~~~~~~~~~-~~~~~~~~~~~-~~--------------------------------------- 209 (267)
T 3ay3_A 171 DARMMATWLSVDDFMRLMKRAFVAPK-LGCTVVYGASA-NT--------------------------------------- 209 (267)
T ss_dssp SHHHHHHBCCHHHHHHHHHHHHHSSC-CCEEEEEECCS-CS---------------------------------------
T ss_pred CCCeeeccccHHHHHHHHHHHHhCCC-CCceeEecCCC-cc---------------------------------------
Confidence 12235689999999999999999864 23467887763 21
Q ss_pred CCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHH
Q 016370 335 YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369 (390)
Q Consensus 335 ~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~ 369 (390)
....|..++ +.|||+|+++++++++++.+
T Consensus 210 -----~~~~d~~~~-~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 210 -----ESWWDNDKS-AFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp -----SCCBCCGGG-GGGCCCCCCCGGGGHHHHHH
T ss_pred -----ccccCHHHH-HHcCCCCCCCHHHHHHHHHh
Confidence 112455667 78999999999999988764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=264.05 Aligned_cols=298 Identities=13% Similarity=0.127 Sum_probs=201.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh----hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
+|.+|+|||||||||||++|++.|+++ |++|++++|+++ ....+... ...+++++.+|+.|.+.+.++++
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l----~~~~v~~~~~Dl~d~~~l~~~~~~ 81 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKAL----EDKGAIIVYGLINEQEAMEKILKE 81 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHH----HHTTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHH----HhCCcEEEEeecCCHHHHHHHHhh
Confidence 466789999999999999999999999 899999999862 22111111 12589999999999999999999
Q ss_pred -cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccc
Q 016370 89 -MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYV 165 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~ 165 (390)
++|+|||+++. .|+.++.+++++|++.+ ++||+ | +||.. .+|..+.
T Consensus 82 ~~~d~Vi~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~~~~-------- 130 (346)
T 3i6i_A 82 HEIDIVVSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRADPV-------- 130 (346)
T ss_dssp TTCCEEEECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTCCCC--------
T ss_pred CCCCEEEECCch---------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCccCcC--------
Confidence 89999999985 27899999999999988 56654 4 35532 2333332
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
.|.+.|+.+|..+|++++. .+++++++||+.++|.... .+.. ......
T Consensus 131 --------------~p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~-------------~~~~-~~~~~~ 178 (346)
T 3i6i_A 131 --------------EPGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYY-------------NNIH-PSEVLP 178 (346)
T ss_dssp --------------TTHHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCS-------------CC------CCC
T ss_pred --------------CCcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCc-------------cccc-cccccC
Confidence 2556899999999999865 5899999999999997533 1111 111233
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
.+..+.++++++..++|+|++|+|++++.++.++. ..+++|++.++++.+|+.|+++.+.+.+|++......+......
T Consensus 179 ~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~ 257 (346)
T 3i6i_A 179 PTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR-TLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLA 257 (346)
T ss_dssp CSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG-GTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHH
T ss_pred CCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc-ccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHH
Confidence 56678889999999999999999999999999875 45789999853379999999999999999875544333221100
Q ss_pred Ccccc-cC---------CCCCCCCCCcCcH-----HHHHHhc-CcccccCHHHHHHHHHHHHHHhHhHHHHH
Q 016370 326 SSKEF-YG---------EGYDDSDKRIPDM-----TIINQQL-GWNPKTSLWDLLESTLTYQHRTYAEAIKQ 381 (390)
Q Consensus 326 ~~~~~-~~---------~~~~~~~~~~~d~-----~k~~~~l-g~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 381 (390)
..... .+ ..+.......++. .++++.+ +++| ++++|.|+++++|++++++.+.+.
T Consensus 258 ~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~-t~~~e~l~~~~~~~~~~~~~~~~~ 328 (346)
T 3i6i_A 258 AAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSF-RTVEECFGEYIVKMEEKQPTADSA 328 (346)
T ss_dssp HHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCC-CCHHHHHHHHHCC-----------
T ss_pred HHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCc-CcHHHHHHHHHHHhhccccccccc
Confidence 00000 00 0000000001111 2233333 5555 489999999999999988766654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=239.18 Aligned_cols=219 Identities=17% Similarity=0.216 Sum_probs=174.7
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCe-eEEeCCCCChhHHHHhhcc
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRI-QFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i-~~~~~D~~d~~~~~~~~~~ 89 (390)
+...+++|+||||||||+||++++++|+++ |++|++++|+++....+.. .++ +++.+|++ +.+.+++.+
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~--~~~~~~~~~ 84 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEEQGPELRE-------RGASDIVVANLE--EDFSHAFAS 84 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH-------TTCSEEEECCTT--SCCGGGGTT
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECChHHHHHHHh-------CCCceEEEcccH--HHHHHHHcC
Confidence 345688899999999999999999999999 9999999999876655433 378 99999999 778888999
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
+|+|||+|+... ..++...+++|+.++.+++++|++.+ ++||++||...+... ..+
T Consensus 85 ~D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~-------~~~------------ 141 (236)
T 3e8x_A 85 IDAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD-------QGP------------ 141 (236)
T ss_dssp CSEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGG-------GSC------------
T ss_pred CCEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCC-------CCh------------
Confidence 999999999763 24677889999999999999999988 999999995443221 000
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
.+.+.|+.+|..+|.+++ ..+++++++||+.+||+... .
T Consensus 142 -----------~~~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~--------------------------~ 180 (236)
T 3e8x_A 142 -----------MNMRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEEST--------------------------G 180 (236)
T ss_dssp -----------GGGHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCC--------------------------S
T ss_pred -----------hhhhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCC--------------------------C
Confidence 144589999999999886 56899999999999998543 1
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHH
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~ 306 (390)
.+....++...+++++++|+|++++.+++++. ..+++||++++ ..++.|+++.++
T Consensus 181 ~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~v~~~--~~~~~e~~~~i~ 235 (236)
T 3e8x_A 181 KVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNG--DTPIAKVVEQLG 235 (236)
T ss_dssp EEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG-GTTEEEEEEEC--SEEHHHHHHTC-
T ss_pred eEEeccCCCcccCcEeHHHHHHHHHHHhcCcc-ccCCeEEEeCC--CcCHHHHHHHhc
Confidence 12233345557899999999999999999865 56899999996 599999998765
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-32 Score=245.56 Aligned_cols=270 Identities=15% Similarity=0.244 Sum_probs=191.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+||||||||+||+++++.|++++|++|++++|+++....+.. .+++++.+|+.|.+.+.++++++|+|||+|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-------~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a 73 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-------GKVSVRQLDYFNQESMVEAFKGMDTVVFIP 73 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-------TTBEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-------CCCEEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 6899999999999999999888668999999998876554332 589999999999999999999999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+.... ...|+.++.+++++|++.+ ++|||+||.. .. +..+.
T Consensus 74 ~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~---~~------~~~~~------------------- 115 (289)
T 3e48_A 74 SIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYA---DQ------HNNPF------------------- 115 (289)
T ss_dssp CCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESC---CS------TTCCS-------------------
T ss_pred CCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccC---CC------CCCCC-------------------
Confidence 86532 1358899999999999999 9999999943 21 11111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
.+...+..+|..+ +..+++++++||+.+||+.. .++ .....+.. .+.+.+
T Consensus 116 -------~~~~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~~--------------~~~----~~~~~~~~-~~~~~g 165 (289)
T 3e48_A 116 -------HMSPYFGYASRLL----STSGIDYTYVRMAMYMDPLK--------------PYL----PELMNMHK-LIYPAG 165 (289)
T ss_dssp -------TTHHHHHHHHHHH----HHHCCEEEEEEECEESTTHH--------------HHH----HHHHHHTE-ECCCCT
T ss_pred -------ccchhHHHHHHHH----HHcCCCEEEEeccccccccH--------------HHH----HHHHHCCC-EecCCC
Confidence 1222233445444 45689999999999999732 122 22222222 334567
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc------c
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE------F 330 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~------~ 330 (390)
+..++|++++|+|+++..++.++.. .+++||++ + +.+|+.|+++.+.+.+|++......+.......... .
T Consensus 166 ~~~~~~i~~~Dva~~~~~~l~~~~~-~g~~~~~~-~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~ 242 (289)
T 3e48_A 166 DGRINYITRNDIARGVIAIIKNPDT-WGKRYLLS-G-YSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGAL 242 (289)
T ss_dssp TCEEEEECHHHHHHHHHHHHHCGGG-TTCEEEEC-C-EEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHH
T ss_pred CceeeeEEHHHHHHHHHHHHcCCCc-CCceEEeC-C-CcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHH
Confidence 8899999999999999999998752 38899999 7 799999999999999998654433332111100000 0
Q ss_pred cCC--CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHH
Q 016370 331 YGE--GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366 (390)
Q Consensus 331 ~~~--~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~ 366 (390)
... ..........+...+++.||+.|+ ++++.+++
T Consensus 243 ~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~ 279 (289)
T 3e48_A 243 LASMYHAGARGLLDQESNDFKQLVNDQPQ-TLQSFLQE 279 (289)
T ss_dssp HHHHHHHHHTTTTCCCCSHHHHHHSSCCC-CHHHHHHC
T ss_pred HHHHHHHHHCCCccccCchHHHHhCCCCC-CHHHHHHH
Confidence 000 000111223455667788998877 78777665
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=241.25 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=179.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|+||+||||||+|+||++|+++|+++ |++|++++|++.... ..+++++.+|++|.+++.++++++|+||
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 69 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIV 69 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhc-CCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 45789999999999999999999999 999999999875432 2588999999999999999999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccccccc-CCCCCCCCCCCCCccccccccCCCC
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTI-GSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
|+||.. ...+....+++|+.++.++++++++.+ ++|||+||..+|+... ..+++|+.+..
T Consensus 70 ~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~-------------- 131 (267)
T 3rft_A 70 HLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPAR-------------- 131 (267)
T ss_dssp ECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCC--------------
T ss_pred ECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCC--------------
Confidence 999974 334567789999999999999999998 8999999999997543 34555555442
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
|.+.|+.+|...|.+++.++++++++++++||+.+||+..
T Consensus 132 --------~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~-------------------------------- 171 (267)
T 3rft_A 132 --------PDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPN-------------------------------- 171 (267)
T ss_dssp --------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC--------------------------------
T ss_pred --------CCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC--------------------------------
Confidence 5568999999999999999888999999999999998632
Q ss_pred ecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHH
Q 016370 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303 (390)
Q Consensus 253 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~ 303 (390)
++...++|++++|+++++..+++.+. ....++++.++ +..++.++..
T Consensus 172 --~~~~~~~~~~~~d~a~~~~~~~~~~~-~~~~~~~~~s~-~~~~~~~~~~ 218 (267)
T 3rft_A 172 --NYRMLSTWFSHDDFVSLIEAVFRAPV-LGCPVVWGASA-NDAGWWDNSH 218 (267)
T ss_dssp --STTHHHHBCCHHHHHHHHHHHHHCSC-CCSCEEEECCC-CTTCCBCCGG
T ss_pred --CCCceeeEEcHHHHHHHHHHHHhCCC-CCceEEEEeCC-CCCCcccChh
Confidence 23345678999999999999999865 34567888885 5777666543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.7e-32 Score=236.15 Aligned_cols=208 Identities=14% Similarity=0.202 Sum_probs=171.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~~~~d~Vih~ 96 (390)
|+||||||||+||++++++|+++ |++|++++|+++....+ .+++++.+|+.| .+++.++++++|+|||+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 58999999999999999999999 99999999987654422 589999999999 99999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|+.... ..+++|+.++.+++++|++.+ ++|||+||.++|+... ..| .+
T Consensus 71 ag~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~---~~e-~~------------------- 119 (219)
T 3dqp_A 71 SGSGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEK---WIG-AG------------------- 119 (219)
T ss_dssp CCCTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGG---CCS-HH-------------------
T ss_pred CcCCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCc---ccc-cc-------------------
Confidence 997642 255689999999999999999 8999999987776431 122 11
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
..|.+.|+.+|..+|.+++ +..+++++++||+.+||+.... .+. .
T Consensus 120 ---~~~~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~--------------------------~~~-~-- 164 (219)
T 3dqp_A 120 ---FDALKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATG--------------------------LID-I-- 164 (219)
T ss_dssp ---HHHTHHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCS--------------------------EEE-E--
T ss_pred ---cccccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCC--------------------------ccc-c--
Confidence 1256689999999999986 4568999999999999986430 011 1
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHH
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~ 304 (390)
+...+++++++|+|++++.+++++. ..+++||++++ ..++.|+++.
T Consensus 165 ~~~~~~~i~~~Dva~~i~~~l~~~~-~~g~~~~i~~g--~~~~~e~~~~ 210 (219)
T 3dqp_A 165 NDEVSASNTIGDVADTIKELVMTDH-SIGKVISMHNG--KTAIKEALES 210 (219)
T ss_dssp SSSCCCCEEHHHHHHHHHHHHTCGG-GTTEEEEEEEC--SEEHHHHHHT
T ss_pred CCCcCCcccHHHHHHHHHHHHhCcc-ccCcEEEeCCC--CccHHHHHHH
Confidence 2567899999999999999999865 45889999986 5899987753
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=227.91 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=148.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
||||||||||+||++|+++|+++ |++|++++|+++....+. .+++++.+|++|.+. +.+.++|+|||+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 69 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTH--------KDINILQKDIFDLTL--SDLSDQNVVVDAY 69 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhcc--------CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence 68999999999999999999999 999999999987665432 478999999999887 7788999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC-CCCCCCCCCCCCccccccccCCCCccc
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+.... ....|+.++.+++++|++.+ +++|++||..+|..... .+..++.+.
T Consensus 70 g~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~------------------ 122 (221)
T 3ew7_A 70 GISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGL------------------ 122 (221)
T ss_dssp CSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-----------------------------------
T ss_pred cCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCC------------------
Confidence 97421 23568999999999999997 99999999876544322 233333322
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhh-hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGA-ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~-~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
.|.+.|+.+|...|.+. .+.+ ..+++++++||+.+|||+.. . .. + ...+.++.+.+
T Consensus 123 ----~~~~~y~~~k~~~e~~~-~~~~~~~gi~~~ivrp~~v~g~~~~---------~---~~---~---~~~~~~~~~~~ 179 (221)
T 3ew7_A 123 ----REAPYYPTARAQAKQLE-HLKSHQAEFSWTYISPSAMFEPGER---------T---GD---Y---QIGKDHLLFGS 179 (221)
T ss_dssp ------CCCSCCHHHHHHHHH-HHHTTTTTSCEEEEECSSCCCCC-----------------------------------
T ss_pred ----CCHHHHHHHHHHHHHHH-HHHhhccCccEEEEeCcceecCCCc---------c---Cc---e---EeccccceecC
Confidence 24557999999999863 3333 67999999999999998432 0 00 0 11233344443
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHH
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~ 300 (390)
++ .++++++|+|++++.+++++. ..++.||++++ ...+..|
T Consensus 180 ~~---~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~~~-~~~~~~~ 220 (221)
T 3ew7_A 180 DG---NSFISMEDYAIAVLDEIERPN-HLNEHFTVAGK-LEHHHHH 220 (221)
T ss_dssp -------CCCHHHHHHHHHHHHHSCS-CTTSEEECCC---------
T ss_pred CC---CceEeHHHHHHHHHHHHhCcc-ccCCEEEECCC-Ccccccc
Confidence 33 379999999999999999976 56899999997 5666544
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-31 Score=242.17 Aligned_cols=233 Identities=13% Similarity=0.096 Sum_probs=180.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+|+||||||||+||++++++|+++ | ++|++++|++.... .+. ..+++++.+|+.|.+.+..+++++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~R~~~~~~~~~l~-------~~~~~~~~~D~~d~~~l~~~~~~~d~v 76 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRKKAAKELR-------LQGAEVVQGDQDDQVIMELALNGAYAT 76 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-CSSEEEEEESCTTSHHHHHHH-------HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-CCceEEEEEcCCCCHHHHHHH-------HCCCEEEEecCCCHHHHHHHHhcCCEE
Confidence 478999999999999999999999 7 99999999875432 111 147899999999999999999999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
||+++.... .....|+.++.+++++|++.+ ++|||+|+..+|+...+ .
T Consensus 77 i~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~------~----------------- 125 (299)
T 2wm3_A 77 FIVTNYWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG------R----------------- 125 (299)
T ss_dssp EECCCHHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT------S-----------------
T ss_pred EEeCCCCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC------c-----------------
Confidence 999975311 123567889999999999988 89999999888764211 0
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH-HhcCCCeE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN-LLRRQPLK 251 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 251 (390)
+...|+.+|..+|.+++. .+++++++||+.+||+... .+ +.. ...+....
T Consensus 126 --------~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~-------------~~----~~~~~~~g~~~~ 176 (299)
T 2wm3_A 126 --------LAAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLS-------------HF----LPQKAPDGKSYL 176 (299)
T ss_dssp --------CCCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGT-------------TT----CCEECTTSSSEE
T ss_pred --------ccCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchh-------------hc----CCcccCCCCEEE
Confidence 223699999999999865 4899999999999997432 00 111 12232222
Q ss_pred E-ecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 252 L-VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 252 ~-~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+ .+.++..++|++++|+|+++..++.++....+++||+++ +.+|+.|+++.+.+.+|++......+
T Consensus 177 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g--~~~s~~e~~~~~~~~~g~~~~~~~~~ 243 (299)
T 2wm3_A 177 LSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST--CRHTAEEYAALLTKHTRKVVHDAKMT 243 (299)
T ss_dssp ECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS--EEECHHHHHHHHHHHHSSCEEECCCC
T ss_pred EEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee--ccCCHHHHHHHHHHHHCCCceeEecC
Confidence 2 234677899999999999999999875323578999987 37999999999999999875544443
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=228.58 Aligned_cols=219 Identities=13% Similarity=0.051 Sum_probs=162.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
||||||||||+||++|+++|+++ |++|++++|+++....+.. .+++++.+|++|.+. .++.++|+|||+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-------~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 70 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLG-------ATVATLVKEPLVLTE--ADLDSVDAVVDAL 70 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTC-------TTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccC-------CCceEEecccccccH--hhcccCCEEEECC
Confidence 68999999999999999999999 9999999998876654432 589999999999887 7788999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCC-CCCCCCCCCCCccccccccCCCCcccC
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
+..... .....|+.++.+++++|++.++++|++||.+.+...... +...+ ++.
T Consensus 71 g~~~~~-------~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-------------~~~------ 124 (224)
T 3h2s_A 71 SVPWGS-------GRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILD-------------FPE------ 124 (224)
T ss_dssp CCCTTS-------SCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGG-------------CCG------
T ss_pred ccCCCc-------chhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCcccccc-------------CCC------
Confidence 976211 124679999999999999988999999998655443221 10011 110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
.+.|.+.|+.+|..+|. +..+.+..+++++++||+.+|||+.. .... .....+.. +
T Consensus 125 -~~~~~~~y~~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~---------~~~~----------~~~~~~~~---~ 180 (224)
T 3h2s_A 125 -SAASQPWYDGALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPA---------TSYV----------AGKDTLLV---G 180 (224)
T ss_dssp -GGGGSTTHHHHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCC---------CCEE----------EESSBCCC---C
T ss_pred -CCccchhhHHHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcc---------cCce----------eccccccc---C
Confidence 11246689999999994 45565677999999999999999543 1100 11122222 2
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccH
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTV 298 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~ 298 (390)
...+++++++|+|++++.+++++. ..+++|++++. +..+.
T Consensus 181 ~~~~~~i~~~DvA~~~~~~l~~~~-~~g~~~~~~~~-~~~~~ 220 (224)
T 3h2s_A 181 EDGQSHITTGNMALAILDQLEHPT-AIRDRIVVRDA-DLEHH 220 (224)
T ss_dssp TTSCCBCCHHHHHHHHHHHHHSCC-CTTSEEEEEEC-C----
T ss_pred CCCCceEeHHHHHHHHHHHhcCcc-ccCCEEEEecC-cchhc
Confidence 345789999999999999999976 56899999985 45443
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=228.76 Aligned_cols=234 Identities=12% Similarity=0.131 Sum_probs=176.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+|+||||||+|+||++++++|++++ |++|++++|++.....+ ..+++++.+|++|.+++.++++++|+|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~v 73 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQGIDAL 73 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------CCCeeEEEecCCCHHHHHHHHcCCCEE
Confidence 457899999999999999999999985 79999999987654433 247889999999999999999999999
Q ss_pred EEeccccCCcc-------------ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 94 INLAAICTPAD-------------YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 94 ih~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
||+|+...... ...+....+++|+.++.++++++++.+ ++|||+||..++... .+..+
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--------~~~~~ 145 (253)
T 1xq6_A 74 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--------HPLNK 145 (253)
T ss_dssp EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--------CGGGG
T ss_pred EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--------Ccccc
Confidence 99999763211 111122457899999999999999988 899999998765321 11100
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
...+.|+.+|..+|.+++. .+++++++||+.+||+..... .+
T Consensus 146 --------------------~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~-----------~~--- 187 (253)
T 1xq6_A 146 --------------------LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR-----------EL--- 187 (253)
T ss_dssp --------------------GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS-----------CE---
T ss_pred --------------------ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh-----------hh---
Confidence 0112488899999998853 689999999999999865310 00
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCC--CcccHHHHHHHHHHHhhc
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPH--NEVTVRQLAEMMTEVYAK 311 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~--~~~s~~~l~~~i~~~~g~ 311 (390)
..+....+.+ ...++++++|+|++++.+++++. ..+++||+++++ +.+|+.|+++.+.+.+|+
T Consensus 188 -----~~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 188 -----LVGKDDELLQ---TDTKTVPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp -----EEESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGG-GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred -----hccCCcCCcC---CCCcEEcHHHHHHHHHHHHcCcc-ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 0000001111 13569999999999999999864 357899999862 369999999999988775
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-30 Score=238.56 Aligned_cols=234 Identities=13% Similarity=0.076 Sum_probs=176.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hccccccccCCCCCeeEEeCC-CCChhHHHHhhccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPESQTGADRIQFHRLN-IKHDSRLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~i~~~~~D-~~d~~~~~~~~~~~d~ 92 (390)
.+|+|||||||||||++|++.|+++ |++|++++|+++.. ..+.. ..+++++.+| ++|.+.+.++++++|+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~l~~------~~~v~~v~~D~l~d~~~l~~~~~~~d~ 76 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQA------IPNVTLFQGPLLNNVPLMDTLFEGAHL 76 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHT------STTEEEEESCCTTCHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCChhhHHHHhh------cCCcEEEECCccCCHHHHHHHHhcCCE
Confidence 3578999999999999999999998 99999999987643 22211 1478999999 9999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeeccc--ccccccCCCCCCCCCCCCCcccccccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCE--VYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~--vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
|||+++... . ..|..+ ++++++|++.+ ++|||+||.. +|+..
T Consensus 77 Vi~~a~~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~---------------------- 122 (352)
T 1xgk_A 77 AFINTTSQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPW---------------------- 122 (352)
T ss_dssp EEECCCSTT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSC----------------------
T ss_pred EEEcCCCCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCC----------------------
Confidence 999986431 1 236666 99999999887 7999999975 33210
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHH-HhcC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN-LLRR 247 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 247 (390)
+.+.|+.+|..+|.+++. .+++++++||+ +||++... ....++ ... ...+
T Consensus 123 ------------~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~---------~~~~~~---~~~~~~~g 173 (352)
T 1xgk_A 123 ------------PAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTS---------LPYPLF---QMELMPDG 173 (352)
T ss_dssp ------------CCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBS---------SSCSSC---BEEECTTS
T ss_pred ------------CCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchh---------cccccc---cccccCCC
Confidence 223699999999999865 48999999976 68876431 000010 001 1223
Q ss_pred CC-eEEecCCcceeeeeeH-HHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCC
Q 016370 248 QP-LKLVDGGQSQRTFIYI-KDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321 (390)
Q Consensus 248 ~~-~~~~~~~~~~~~~i~v-~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~ 321 (390)
.. +.+++++++.++++|+ +|+|+++..+++++. ...+++||+++ +.+|+.|+++.+.+.+|++.....++..
T Consensus 174 ~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~--~~~s~~e~~~~i~~~~G~~~~~~~vp~~ 248 (352)
T 1xgk_A 174 TFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF--ETLSPVQVCAAFSRALNRRVTYVQVPKV 248 (352)
T ss_dssp CEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--EEECHHHHHHHHHHHHTSCEEEEECSSC
T ss_pred ceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec--CCCCHHHHHHHHHHHHCCCCceEECCHH
Confidence 32 2346667889999999 899999999998752 12578999996 4799999999999999987665555533
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-28 Score=207.55 Aligned_cols=202 Identities=13% Similarity=0.098 Sum_probs=156.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+|+||||||||+||++++++|+++ |++|++++|++....... ..+++++.+|+.|.+.+.++++++|+|||
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~ 73 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEG-------PRPAHVVVGDVLQAADVDKTVAGQDAVIV 73 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSS-------CCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhccccc-------CCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3479999999999999999999999 899999999876543221 25789999999999999999999999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
+|+.... .++ .+.|+.++.++++++++.+ ++||++||..+|+.....+
T Consensus 74 ~a~~~~~----~~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~------------------------ 122 (206)
T 1hdo_A 74 LLGTRND----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP------------------------ 122 (206)
T ss_dssp CCCCTTC----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC------------------------
T ss_pred CccCCCC----CCc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc------------------------
Confidence 9997643 111 2478999999999999988 8999999999987643110
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
.+.+.|+.+|..+|.+++ ..+++++++||+.+ +++.. .. .+ ....+
T Consensus 123 -----~~~~~y~~~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~---------~~--~~-------------~~~~~ 168 (206)
T 1hdo_A 123 -----PRLQAVTDDHIRMHKVLR----ESGLKYVAVMPPHI-GDQPL---------TG--AY-------------TVTLD 168 (206)
T ss_dssp -----GGGHHHHHHHHHHHHHHH----HTCSEEEEECCSEE-ECCCC---------CS--CC-------------EEESS
T ss_pred -----ccchhHHHHHHHHHHHHH----hCCCCEEEEeCCcc-cCCCC---------Cc--ce-------------Eeccc
Confidence 033479999999999984 35899999999998 43321 00 00 00011
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
+... .++++++|+|+++..+++++. ..+++||++++
T Consensus 169 ~~~~-~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~g 204 (206)
T 1hdo_A 169 GRGP-SRVISKHDLGHFMLRCLTTDE-YDGHSTYPSHQ 204 (206)
T ss_dssp SCSS-CSEEEHHHHHHHHHHTTSCST-TTTCEEEEECC
T ss_pred CCCC-CCccCHHHHHHHHHHHhcCcc-ccccceeeecc
Confidence 1111 489999999999999999865 56889999986
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=229.94 Aligned_cols=240 Identities=15% Similarity=0.207 Sum_probs=176.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-----hhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
+|+||||||||+||+++++.|+++ |++|++++|+++. ...+... ...+++++.+|+.|.+.+.++++++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~l~~~~~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYF----KQLGAKLIEASLDDHQRLVDALKQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHH----HTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHH----HhCCeEEEeCCCCCHHHHHHHHhCCC
Confidence 578999999999999999999999 8999999998532 1111110 02578999999999999999999999
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
+|||+++.... ..|+.++.+++++|++.+ +|||+ | +||.....+ ..+..
T Consensus 79 ~vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~----------- 129 (313)
T 1qyd_A 79 VVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQ----------- 129 (313)
T ss_dssp EEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCS-----------
T ss_pred EEEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCC-----------
Confidence 99999986532 137888999999999987 67875 3 455432111 11110
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
...+.| .+|..+|.+++. .+++++++||+.++|+.... +..........++.
T Consensus 130 ----------p~~~~y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~-------------~~~~~~~~~~~~~~ 181 (313)
T 1qyd_A 130 ----------PGSITF-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGS-------------LAQLDGHMMPPRDK 181 (313)
T ss_dssp ----------STTHHH-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTT-------------SSCTTCCSSCCSSE
T ss_pred ----------CCcchH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccc-------------cccccccccCCCCe
Confidence 013468 999999998853 58999999999998853220 00000001123445
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+.++++++..+++++++|+|+++..++.++. ..++.|++.++++.+|+.|+++.+.+.+|++......+
T Consensus 182 ~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 250 (313)
T 1qyd_A 182 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 250 (313)
T ss_dssp ECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred EEEeCCCCceEEEEEHHHHHHHHHHHHhCcc-cCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence 5667788889999999999999999998864 34678888764368999999999999999876544444
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=220.83 Aligned_cols=204 Identities=20% Similarity=0.156 Sum_probs=161.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+|+||||||+|+||++++++|+++ |+ +|++++|++.. . ..+++++.+|+.|.+.+.+++ +|+||
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~-g~~~~V~~~~r~~~~-~----------~~~~~~~~~D~~~~~~~~~~~--~d~vi 70 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALA-E----------HPRLDNPVGPLAELLPQLDGS--IDTAF 70 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC-TTCCEEECCBSSCCC-C----------CTTEECCBSCHHHHGGGCCSC--CSEEE
T ss_pred CceEEEECCCcHHHHHHHHHHHhC-CCCCeEEEEeCCCcc-c----------CCCceEEeccccCHHHHHHhh--hcEEE
Confidence 579999999999999999999999 77 99999998754 1 247888999999998888888 99999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
|+|+.... ...++...+++|+.++.++++++++.+ ++|||+||..+|+.
T Consensus 71 ~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~---------------------------- 120 (215)
T 2a35_A 71 CCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK---------------------------- 120 (215)
T ss_dssp ECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT----------------------------
T ss_pred ECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC----------------------------
Confidence 99996532 234667788999999999999999998 89999999988753
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCcc-EEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLE-FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
|.+.|+.+|..+|.+++. .+++ ++++||+.+|||.... .++. .+. +...++
T Consensus 121 -------~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~------------~~~~----~~~-~~~~~~ 172 (215)
T 2a35_A 121 -------SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEF------------RLAE----ILA-APIARI 172 (215)
T ss_dssp -------CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCE------------EGGG----GTT-CCCC--
T ss_pred -------CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcc------------hHHH----HHH-Hhhhhc
Confidence 223799999999999854 4899 9999999999997541 1111 111 222222
Q ss_pred ecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHH
Q 016370 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 253 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~ 299 (390)
+++ .++++|++|+|+++..+++++. +++||++++ +.+++.
T Consensus 173 -~~~--~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~-~~~~~~ 212 (215)
T 2a35_A 173 -LPG--KYHGIEACDLARALWRLALEEG---KGVRFVESD-ELRKLG 212 (215)
T ss_dssp ---C--HHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHH-HHHHHH
T ss_pred -cCC--CcCcEeHHHHHHHHHHHHhcCC---CCceEEcHH-HHHHhh
Confidence 222 6799999999999999999863 789999986 565543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-28 Score=220.79 Aligned_cols=232 Identities=17% Similarity=0.221 Sum_probs=172.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-------hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-------DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
||+||||||||+||++|++.|+++ |++|++++|++ .....+... ...+++++.+|+.|.+.+.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l----~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNY----QSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHH----HHTTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHH----HhCCCEEEEeCCCCHHHHHHHHhC
Confidence 678999999999999999999999 89999999986 222211110 014789999999999999999999
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
+|+|||+++... +.++.+++++|++.+ ++||+ | +||... ++..+.
T Consensus 77 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~---------- 123 (307)
T 2gas_A 77 VDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAV---------- 123 (307)
T ss_dssp CSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCC----------
T ss_pred CCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCC----------
Confidence 999999998542 566889999999886 67773 3 355321 111111
Q ss_pred cCCCCcccCCCCCC-CchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 168 EDASPCIFGSIEKQ-RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 168 e~~~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
.| .+.| .+|..+|.+++. .+++++++||+.++++... .+.. .......
T Consensus 124 ------------~p~~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~-------------~~~~-~~~~~~~ 172 (307)
T 2gas_A 124 ------------EPVRQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLR-------------NLAQ-LDATDPP 172 (307)
T ss_dssp ------------TTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGG-------------GTTC-TTCSSCC
T ss_pred ------------CcchhHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccc-------------cccc-cccccCC
Confidence 12 3468 999999998854 4799999999999886432 0100 0001123
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCccc
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~ 318 (390)
+..+.+.++++..+++++++|+|+++..++.++. ..++.|++.++++.+|+.|+++.+.+.+|++......
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 243 (307)
T 2gas_A 173 RDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-TLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYV 243 (307)
T ss_dssp SSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-GTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEE
T ss_pred CCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-ccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeec
Confidence 4556777888889999999999999999998864 3567888875435899999999999999976544433
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=211.42 Aligned_cols=208 Identities=12% Similarity=0.112 Sum_probs=160.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|++|+||||||+|+||++++++|+++ |+ +|++++|++....... ..++.++.+|++|.+++.++++++|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 45789999999999999999999999 88 9999999875443221 13688999999999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
|||+||.... ..++...+++|+.++.++++++++.+ ++||++||..+|+..
T Consensus 88 vi~~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------------------------- 139 (242)
T 2bka_A 88 GFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------------------------- 139 (242)
T ss_dssp EEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------------------------
T ss_pred EEECCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC-------------------------
Confidence 9999996532 12345678899999999999999988 899999999887531
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCc-cEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL-EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
.+.|+.+|...|.+++. .++ +++++||+.+|||... ......+........+.
T Consensus 140 ----------~~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~------------~~~~~~~~~~~~~~~~~ 193 (242)
T 2bka_A 140 ----------NFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQE------------SRPGEWLVRKFFGSLPD 193 (242)
T ss_dssp ----------SSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGG------------GSHHHHHHHHHHCSCCT
T ss_pred ----------cchHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCC------------CcHHHHHHHHhhcccCc
Confidence 13699999999999865 367 5999999999999643 11223333333332221
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
..+ ...+++++|+|++++.++.++. ..+.|++.+
T Consensus 194 -~~~----~~~~~~~~dva~~~~~~~~~~~--~~~~~~~~~ 227 (242)
T 2bka_A 194 -SWA----SGHSVPVVTVVRAMLNNVVRPR--DKQMELLEN 227 (242)
T ss_dssp -TGG----GGTEEEHHHHHHHHHHHHTSCC--CSSEEEEEH
T ss_pred -ccc----CCcccCHHHHHHHHHHHHhCcc--ccCeeEeeH
Confidence 111 2348999999999999999864 445666655
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.9e-28 Score=221.96 Aligned_cols=231 Identities=15% Similarity=0.184 Sum_probs=174.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-h-----hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-D-----KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~-----~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.||+||||||||+||++++++|+++ |++|++++|++ + ....+... ...+++++.+|+.|.+.+.+++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~----~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEF----RSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHH----HHTTCEEEECCTTCHHHHHHHHTT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHh----hcCCcEEEEecCCCHHHHHHHHcC
Confidence 3578999999999999999999999 89999999986 2 11111100 024789999999999999999999
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
+|+|||+++... +.++.+++++|++.+ ++|| .| +||... ++..+.
T Consensus 78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v-~S---~~g~~~----~~~~~~---------- 124 (321)
T 3c1o_A 78 VDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFL-PS---DFGCEE----DRIKPL---------- 124 (321)
T ss_dssp CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEE-CS---CCSSCG----GGCCCC----------
T ss_pred CCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEe-cc---ccccCc----cccccC----------
Confidence 999999998531 567899999999887 6777 23 455321 111111
Q ss_pred cCCCCcccCCCCCC-CchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH---H
Q 016370 168 EDASPCIFGSIEKQ-RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN---N 243 (390)
Q Consensus 168 e~~~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~---~ 243 (390)
.| .+.| .+|..+|.+++. .+++++++||+.++++ ++..+.. .
T Consensus 125 ------------~p~~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~-----------------~~~~~~~~~~~ 170 (321)
T 3c1o_A 125 ------------PPFESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAY-----------------FVNYLLHPSPH 170 (321)
T ss_dssp ------------HHHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHH-----------------HHHHHHCCCSS
T ss_pred ------------CCcchHH-HHHHHHHHHHHH----cCCCeEEEEeceeccc-----------------ccccccccccc
Confidence 12 3469 999999998854 4799999999998874 2222222 1
Q ss_pred HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
...++.+.+.++++..+++++++|+|+++..++.++. ..++.|++.++++.+|+.|+++.+.+.+|++......+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 245 (321)
T 3c1o_A 171 PNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR-CCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP 245 (321)
T ss_dssp CCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG-GTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred ccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc-ccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence 2345667778888889999999999999999999864 35778888753369999999999999999876544443
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=221.24 Aligned_cols=229 Identities=17% Similarity=0.193 Sum_probs=173.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
++||||||||+||+++++.|+++ |++|++++|+++ ....+... ...+++++.+|+.|.+.+.++++++|+|||+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l----~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~ 86 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEF----QSLGAIIVKGELDEHEKLVELMKKVDVVISA 86 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHH----HHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHh----hcCCCEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 48999999999999999999999 899999999874 22111110 0147899999999999999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
++.. ++.++.+++++|++.+ ++||+ | +||... ++..+.
T Consensus 87 a~~~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~----------------- 126 (318)
T 2r6j_A 87 LAFP---------------QILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINAL----------------- 126 (318)
T ss_dssp CCGG---------------GSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCC-----------------
T ss_pred Cchh---------------hhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCC-----------------
Confidence 9753 1567899999999886 67774 3 355321 111111
Q ss_pred cCCCCCC-CchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 175 FGSIEKQ-RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 175 ~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
.| .+.| .+|..+|.+++. .+++++++||+.+++. ++..++.....+..+.+.
T Consensus 127 -----~p~~~~y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 179 (318)
T 2r6j_A 127 -----PPFEALI-ERKRMIRRAIEE----ANIPYTYVSANCFASY-----------------FINYLLRPYDPKDEITVY 179 (318)
T ss_dssp -----HHHHHHH-HHHHHHHHHHHH----TTCCBEEEECCEEHHH-----------------HHHHHHCTTCCCSEEEEE
T ss_pred -----CCcchhH-HHHHHHHHHHHh----cCCCeEEEEcceehhh-----------------hhhhhccccCCCCceEEe
Confidence 12 2368 999999998854 5799999999888753 334444444456677788
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
++++..++|++++|+|+++..++.++. ..++.|++.++++.+|+.|+++.+.+.+|++......+
T Consensus 180 ~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (318)
T 2r6j_A 180 GTGEAKFAMNYEQDIGLYTIKVATDPR-ALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244 (318)
T ss_dssp TTSCCEEEEECHHHHHHHHHHHTTCGG-GTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred cCCCceeeEeeHHHHHHHHHHHhcCcc-ccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence 888889999999999999999998864 34678888753368999999999999999765544433
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-28 Score=225.12 Aligned_cols=232 Identities=18% Similarity=0.240 Sum_probs=172.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh------hccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI------KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
||+||||||||+||+++++.|+++ |++|++++|+.+.. ..+... ...+++++.+|+.|.+.+.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~l----~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESF----KASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHH----HTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCcccccCHHHHHHHHHH----HhCCCEEEEeccCCHHHHHHHHcCC
Confidence 578999999999999999999999 89999999975321 111100 1257999999999999999999999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
|+|||+++.. ++.++.+++++|++.+ ++||+ | +||... ++..+..
T Consensus 79 d~vi~~a~~~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~---------- 125 (308)
T 1qyc_A 79 DVVISTVGSL---------------QIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVE---------- 125 (308)
T ss_dssp SEEEECCCGG---------------GSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCT----------
T ss_pred CEEEECCcch---------------hhhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCC----------
Confidence 9999999853 1566889999999886 67773 4 355321 1111111
Q ss_pred CCCCcccCCCCCC-CchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 169 DASPCIFGSIEKQ-RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 169 ~~~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
| .+.| .+|..+|.+++. .+++++++||+.++|+.... +.. .......+
T Consensus 126 ------------p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~-------------~~~-~~~~~~~~ 174 (308)
T 1qyc_A 126 ------------PAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRS-------------LAQ-AGLTAPPR 174 (308)
T ss_dssp ------------THHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTT-------------TTC-TTCSSCCS
T ss_pred ------------cchhHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccc-------------ccc-ccccCCCC
Confidence 2 2368 999999998864 47999999999998864320 000 00011245
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCccc
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~ 318 (390)
+.+.+.++++..++|++++|+|+++..++.++. ..++.|++.++++.+|+.|+++.+.+.+|++......
T Consensus 175 ~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~ 244 (308)
T 1qyc_A 175 DKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYV 244 (308)
T ss_dssp SEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEE
T ss_pred CceEEecCCCceEEEecHHHHHHHHHHHHhCcc-ccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeC
Confidence 567778888899999999999999999998764 3567888875436899999999999999976544433
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=209.83 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=176.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.+|+||||||+|+||++++++|+++ |++|++++|+......+... ...++.++.+|++|.+++..+++
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAA----YPDRAEAISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHH----CTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh----ccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999 99999999987765544332 23578999999999999988876
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhh----HHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFID----ALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.+ ++.++..+++.+ .++|++||...+...
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 145 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF------------ 145 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC------------
Confidence 5899999999864321 223445678899999 555566666666 899999997655322
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+.+.|+.+|...|.+.+.++.+ +|++++++||+.+.+|..+..... .......
T Consensus 146 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~ 202 (281)
T 3m1a_A 146 ---------------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAY--FSEENPA 202 (281)
T ss_dssp ---------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEE--ECCBCTT
T ss_pred ---------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccc--cCCcchh
Confidence 14458999999999999988776 689999999999988754310000 0011112
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhc
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~ 311 (390)
+...... ..++ ........+.+++|+|++++.+++.+. .+..|+++++ ....+.+.+..+.+.++.
T Consensus 203 ~~~~~~~----~~~~---~~~~~~~~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~-~~~~i~g~~~~i~~~~~~ 268 (281)
T 3m1a_A 203 YAEKVGP----TRQL---VQGSDGSQPGDPAKAAAAIRLALDTEK--TPLRLALGGD-AVDFLTGHLDSVRAELTE 268 (281)
T ss_dssp THHHHHH----HHHH---HHC-----CBCHHHHHHHHHHHHHSSS--CCSEEEESHH-HHHHHHHHHHHHHHHHHH
T ss_pred hHHHhHH----HHHH---HhhccCCCCCCHHHHHHHHHHHHhCCC--CCeEEecCch-HHHHHHHHHHHHHHHHHH
Confidence 2211111 1111 011223467889999999999999874 5779999996 677888888888877664
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-27 Score=208.54 Aligned_cols=237 Identities=12% Similarity=0.105 Sum_probs=163.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----cccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----MADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----~~d~ 92 (390)
||+||||||+|+||++++++|+++ |++|++++|+++.... .+.+|+.|.+.+.++++ ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA-GHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHcCCCccE
Confidence 468999999999999999999999 9999999997654221 15689999999988887 6999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCC-CCCCCCCCCCcccccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSF-LPKDSPLRQDPAYYVL 166 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~-~~e~~~~~~~~~~~~~ 166 (390)
|||+||.... ..+....+++|+.++.++++++.+. + +++|++||..+|+.....+ ..+.... .
T Consensus 66 vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~--------~ 134 (255)
T 2dkn_A 66 LVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA--------G 134 (255)
T ss_dssp EEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH--------T
T ss_pred EEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc--------c
Confidence 9999997641 3456788999999999999977653 4 8999999999886542110 0000000 0
Q ss_pred ccCCCCcc-cCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH
Q 016370 167 KEDASPCI-FGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242 (390)
Q Consensus 167 ~e~~~~~~-~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (390)
.++ .+.. ......+.+.|+.+|...|.+++.++++ .+++++++||+.++||... .++.
T Consensus 135 ~~~-~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~-----------------~~~~ 196 (255)
T 2dkn_A 135 DEA-RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ-----------------ASKA 196 (255)
T ss_dssp CHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-----------------HHHH
T ss_pred chh-hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-----------------hccc
Confidence 000 0000 0000014458999999999999988765 6899999999999987422 1111
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHH
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQ 300 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~ 300 (390)
....+....... + ...++++++|+|++++.++..+. ...++.||++++ ...++.|
T Consensus 197 ~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg-~~~~~~e 252 (255)
T 2dkn_A 197 DPRYGESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGG-MDALMRA 252 (255)
T ss_dssp CTTTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-HHHHHCT
T ss_pred chhhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCC-eEeeeec
Confidence 111000000010 1 34579999999999999998652 245789999997 6666543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-26 Score=205.43 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=178.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
..+++|+||||||+|+||++++++|+++ |++|++++|+......+..... ...++.++.+|++|.+++.++++
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIG--SPDVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHC--CTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhC--CCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 3577899999999999999999999999 9999999998655433222111 01278999999999999988886
Q ss_pred ---cccEEEEeccccCCc------cccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTPA------DYNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||..... ...++....+++|+.++.++++++... + .++|++||...|....
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------- 161 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE------- 161 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT-------
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC-------
Confidence 589999999976421 111334567889999999999887653 4 7999999988775431
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...|.+.+.++.+ .|++++++||+.++++..... ..
T Consensus 162 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~ 210 (278)
T 2bgk_A 162 -------------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV------FG 210 (278)
T ss_dssp -------------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS------SS
T ss_pred -------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh------cc
Confidence 02347999999999999888754 589999999999999865410 00
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHH
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV 308 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~ 308 (390)
..... ...+....+ .....+++++|+|++++.++.... ...|+.|++.++ ...++.|+++.+.+.
T Consensus 211 ~~~~~----~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg-~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 211 VDSSR----VEELAHQAA-------NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG-YTRTNPAFPTALKHG 276 (278)
T ss_dssp CCHHH----HHHHHHHTC-------SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGGCCTHHHHHSCSC
T ss_pred cchhH----HHHhhhccc-------ccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCc-ccccCCccchhhhhh
Confidence 01111 122211111 112358899999999999986532 245889999997 799999999887654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-25 Score=195.66 Aligned_cols=203 Identities=18% Similarity=0.200 Sum_probs=144.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
..+.||+||||||+|+||++|++.|+++ | ++|++++|+++....+. ..+++++.+|++|.+++.++++++|
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADK-QTIKQTLFARQPAKIHKPY-------PTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSGGGSCSSC-------CTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcChhhhcccc-------cCCcEEEEecCCCHHHHHHHhcCCC
Confidence 3466789999999999999999999999 8 89999999876654432 2589999999999999999999999
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCC
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~ 170 (390)
+|||+++... ....+.++++++++.+ ++||++||..+|+..............
T Consensus 91 ~vv~~a~~~~--------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~------------ 144 (236)
T 3qvo_A 91 IVYANLTGED--------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVI------------ 144 (236)
T ss_dssp EEEEECCSTT--------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------------------
T ss_pred EEEEcCCCCc--------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcc------------
Confidence 9999997431 0134678999999998 899999999999875432221111110
Q ss_pred CCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 171 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
..+...+..+|..+ +..+++++++||+.++++.... +
T Consensus 145 ------------~~~~~~~~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~---------------------------~ 181 (236)
T 3qvo_A 145 ------------GEPLKPFRRAADAI----EASGLEYTILRPAWLTDEDIID---------------------------Y 181 (236)
T ss_dssp ------------CGGGHHHHHHHHHH----HTSCSEEEEEEECEEECCSCCC---------------------------C
T ss_pred ------------cchHHHHHHHHHHH----HHCCCCEEEEeCCcccCCCCcc---------------------------e
Confidence 02333444455555 3568999999999999875320 0
Q ss_pred EEecCCcc-eeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 251 KLVDGGQS-QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 251 ~~~~~~~~-~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.....+.. ...+++++|+|++++.++..+....++.|+++++
T Consensus 182 ~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~ 224 (236)
T 3qvo_A 182 ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP 224 (236)
T ss_dssp EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence 11111111 2358999999999999999876557899999997
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=203.51 Aligned_cols=228 Identities=16% Similarity=0.204 Sum_probs=169.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++....+...... ...++.++.+|++|.+++.++++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 367789999999999999999999999 99999999987654433221110 13468899999999999988876
Q ss_pred --cccEEEEeccccCCcc---ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD---YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 154 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI----------- 154 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-----------
Confidence 6999999999875322 123445678899999999988774 444 8999999987764321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+.+.|+.+|...|.+++.++.+. +++++++||+.++++.... .
T Consensus 155 ----------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~------------~ 200 (255)
T 1fmc_A 155 ----------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS------------V 200 (255)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT------------T
T ss_pred ----------------------CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh------------c
Confidence 33479999999999998887654 8999999999999875320 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCCCCcccH
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTV 298 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~~~~~s~ 298 (390)
....+......+.|+ ..+.+++|+|+++..++..... ..+++||++++ ...|+
T Consensus 201 ~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg-~~~s~ 254 (255)
T 1fmc_A 201 ITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLCSPAASWVSGQILTVSGG-GVQEL 254 (255)
T ss_dssp CCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-SCCCC
T ss_pred cChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCc-eeccC
Confidence 112233333333332 2477899999999999875422 35789999997 66664
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=200.11 Aligned_cols=220 Identities=16% Similarity=0.184 Sum_probs=165.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---c
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---A 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~ 90 (390)
++++|+||||||+|+||++++++|+++ |++|++++|+++....+... ..+++++.+|++|.+++.+++++ +
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKE-----CPGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh-----ccCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 467889999999999999999999999 99999999987655443321 13677889999999999999874 8
Q ss_pred cEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|+|||+||....... .++....+++|+.++.++++++.+. ..++|++||...|....
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 144 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP------------- 144 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC-------------
Confidence 999999997643221 2334567889999999998877543 36899999988765421
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+...|+.+|...|.+++.++++ .+++++++||+.++++.... ....
T Consensus 145 --------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~-----------~~~~ 193 (244)
T 1cyd_A 145 --------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK-----------VSAD 193 (244)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH-----------HTCC
T ss_pred --------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc-----------cccC
Confidence 2347999999999999988766 58999999999999975320 0001
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..++..+..+.+ .+++++++|+|++++.++.... ...|+.+++.++
T Consensus 194 ~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 1cyd_A 194 PEFARKLKERHP---------LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG 240 (244)
T ss_dssp HHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred HHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence 122233332222 3579999999999999997643 245789999886
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=188.66 Aligned_cols=201 Identities=17% Similarity=0.186 Sum_probs=150.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHH-hhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKIL-LETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~-~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|++||||||+|+||++++++|+ ++ |++|++++|++. ....+.. ...++.++.+|++|.+++.++++++|+||
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEII-----DHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSHHHHSCHHHH-----TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCccccchhhcc-----CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 3459999999999999999999 66 999999999877 5544321 13589999999999999999999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
|+|+.. |+. ++++++++++.+ ++||++||..+|+...........+
T Consensus 79 ~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~----------------- 125 (221)
T 3r6d_A 79 VGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFD----------------- 125 (221)
T ss_dssp ESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHH-----------------
T ss_pred EcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccc-----------------
Confidence 999842 344 899999999998 8999999999887532110000000
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
...+.|+.+|...|.+++. .+++++++||+.++++... + .+...
T Consensus 126 ------~~~~~y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~-------------------------~-~~~~~ 169 (221)
T 3r6d_A 126 ------NLPISYVQGERQARNVLRE----SNLNYTILRLTWLYNDPEX-------------------------T-DYELI 169 (221)
T ss_dssp ------TSCHHHHHHHHHHHHHHHH----SCSEEEEEEECEEECCTTC-------------------------C-CCEEE
T ss_pred ------ccccHHHHHHHHHHHHHHh----CCCCEEEEechhhcCCCCC-------------------------c-ceeec
Confidence 0112699999999998853 5899999999999997322 0 01111
Q ss_pred cCCc-ceeeeeeHHHHHHHHHHHH--hCCCCCCCceEEecCC
Q 016370 254 DGGQ-SQRTFIYIKDAIEAVLLMI--ENPARANGHIFNVGNP 292 (390)
Q Consensus 254 ~~~~-~~~~~i~v~D~a~~~~~~l--~~~~~~~~~~~nv~~~ 292 (390)
..+. ....+++.+|+|++++.++ ..+....++.+.+.++
T Consensus 170 ~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~ 211 (221)
T 3r6d_A 170 PEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEP 211 (221)
T ss_dssp CTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECT
T ss_pred cCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCC
Confidence 1111 1224899999999999999 7765456788888875
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=206.51 Aligned_cols=246 Identities=13% Similarity=0.081 Sum_probs=176.1
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
...+++|+||||||+|+||++++++|+++ |++|++++|+.................++.++.+|++|.+++.++++.
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 34577899999999999999999999999 999999999876544332211000024689999999999999888764
Q ss_pred -----ccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHHh-----CC-CcEEEeecccccccccCCCCCCC
Q 016370 90 -----ADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCSE-----NN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
+|+|||+||..... ....+....+++|+.++.++++++.. .+ .++|++||...+...
T Consensus 100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 171 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-------- 171 (302)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC--------
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC--------
Confidence 59999999975431 12234556788999999999877642 23 799999998665432
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...|.+.+.++.+ .|++++++||+.++++.... .
T Consensus 172 -------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~--------~ 218 (302)
T 1w6u_A 172 -------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS--------R 218 (302)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--------------
T ss_pred -------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh--------h
Confidence 13347999999999999988766 68999999999999874320 0
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhh
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g 310 (390)
...... ....+....| ...+++++|+|++++.++.... ...|++|++.++ ...++.++++.+.+..|
T Consensus 219 ~~~~~~--~~~~~~~~~p---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg-~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 219 LDPTGT--FEKEMIGRIP---------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG-EEVLISGEFNDLRKVTK 286 (302)
T ss_dssp CCTTSH--HHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT-HHHHHHSTTGGGGGCCH
T ss_pred cccchh--hHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCC-eeeccCCccccchhhcc
Confidence 000111 1112222222 1247789999999999987532 135789999997 78888888888877666
Q ss_pred c
Q 016370 311 K 311 (390)
Q Consensus 311 ~ 311 (390)
.
T Consensus 287 ~ 287 (302)
T 1w6u_A 287 E 287 (302)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=195.34 Aligned_cols=230 Identities=14% Similarity=0.116 Sum_probs=160.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC------CCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG------ADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~i~~~~~D~~d~~~~~~~~ 87 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|+.+....+........ ..++.++.+|++|.+.+.+++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 82 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL 82 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence 467789999999999999999999999 9999999998765544322111000 146889999999999998888
Q ss_pred cc-------c-cEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCC
Q 016370 88 KM-------A-DLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 88 ~~-------~-d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~ 149 (390)
++ + |+|||+||...... ...+....+++|+.++.++++++.+. ..++|++||...+...
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 159 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN--- 159 (264)
T ss_dssp HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC---
T ss_pred HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC---
Confidence 75 3 99999999865321 22345567889999999999887653 2589999997544221
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
.+...|+.+|...|.+.+.++.+ .|++++++||+.+++|...
T Consensus 160 ------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----- 204 (264)
T 2pd6_A 160 ------------------------------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ----- 204 (264)
T ss_dssp ------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------
T ss_pred ------------------------------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh-----
Confidence 13347999999999999888765 6899999999999998643
Q ss_pred CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHH
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQ 300 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~ 300 (390)
.+...+......+.+ ...+.+++|+|++++.++.... ...|+.+++.++ ...+...
T Consensus 205 --------~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg-~~~~~~~ 261 (264)
T 2pd6_A 205 --------KVPQKVVDKITEMIP---------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG-LFMAENL 261 (264)
T ss_dssp ----------------CTGGGCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-C------
T ss_pred --------hcCHHHHHHHHHhCC---------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC-ceecccc
Confidence 111111122222211 2247789999999999987532 246889999997 5655443
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.2e-25 Score=196.04 Aligned_cols=231 Identities=12% Similarity=0.119 Sum_probs=168.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+........... ...+.++.+|++|.+++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 999999999876655443321 3468899999999999988887
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++... +.++|++||...+....
T Consensus 80 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 150 (259)
T 4e6p_A 80 AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA--------- 150 (259)
T ss_dssp SSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC---------
Confidence 69999999998754322 2344566779999999999877543 25899999987653321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+. |+++.+++|+.+++|...
T Consensus 151 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------------ 194 (259)
T 4e6p_A 151 ------------------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD------------ 194 (259)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH------------
T ss_pred ------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh------------
Confidence 23479999999999999887654 899999999999998543
Q ss_pred hhhHHHHHHHHhc---CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 234 PRVLACFSNNLLR---RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 234 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
....++..... +......++..+...+.+++|+|++++.++.... ...|++|++.+| ..+|
T Consensus 195 --~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG-~~~s 259 (259)
T 4e6p_A 195 --GVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG-NWMS 259 (259)
T ss_dssp --HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT-SSCC
T ss_pred --hhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC-hhcC
Confidence 11111222111 1111112222345568999999999998886432 245899999997 5543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=195.83 Aligned_cols=248 Identities=12% Similarity=0.114 Sum_probs=162.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc--cCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES--QTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
++++|+||||||+|+||+++++.|+++ |++|++++|+++....+..... .....++.++.+|++|.+++.++++
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence 367789999999999999999999999 9999999998765443321110 0012468899999999999988887
Q ss_pred ----cccEEEEeccccCCcc--------ccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccc-cccccCCCC
Q 016370 89 ----MADLTINLAAICTPAD--------YNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEV-YGKTIGSFL 151 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~v-y~~~~~~~~ 151 (390)
++|+|||+||...... ..++....+++|+.++.++++++... +.++|++||... +....
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 157 (278)
T 1spx_A 82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP---- 157 (278)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT----
T ss_pred HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCC----
Confidence 6999999999764321 22344567889999999998887653 479999999765 43210
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
+...|+.+|...+.+.+.++.+ .|++++++||+.++++...... .
T Consensus 158 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~ 205 (278)
T 1spx_A 158 -----------------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG---M 205 (278)
T ss_dssp -----------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------
T ss_pred -----------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccc---c
Confidence 2347999999999999887654 5899999999999988543100 0
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC--CCCceEEecCCCCcccHHHHHHHHH
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR--ANGHIFNVGNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~nv~~~~~~~s~~~l~~~i~ 306 (390)
+......+. ..........| ...+.+++|+|++++.++..+.. ..|+.|++.+| ...++.++++.+.
T Consensus 206 ~~~~~~~~~-~~~~~~~~~~p---------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG-~~~~~~~~~~~~~ 274 (278)
T 1spx_A 206 PEETSKKFY-STMATMKECVP---------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG-SSLIMGLHCQDFA 274 (278)
T ss_dssp --------H-HHHHHHHHHCT---------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT-GGGC---------
T ss_pred Cchhhhhhh-HHHHHHHhcCC---------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCC-cccccCcccccHH
Confidence 000000000 00111111111 12378999999999998875321 35899999997 7999999999988
Q ss_pred HHh
Q 016370 307 EVY 309 (390)
Q Consensus 307 ~~~ 309 (390)
+.+
T Consensus 275 ~~~ 277 (278)
T 1spx_A 275 KLL 277 (278)
T ss_dssp ---
T ss_pred HHh
Confidence 753
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=191.05 Aligned_cols=219 Identities=14% Similarity=0.180 Sum_probs=162.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---ccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MAD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~d 91 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+.+....+... ..+++++.+|++|.+++.++++ ++|
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRE-----CPGIEPVCVDLGDWEATERALGSVGPVD 78 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH-----cCCCCEEEEeCCCHHHHHHHHHHcCCCC
Confidence 56789999999999999999999999 99999999987655443321 1356788999999999999986 389
Q ss_pred EEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
+|||+||....... .++....+++|+.++.++++++.+. ..++|++||...+...
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 143 (244)
T 3d3w_A 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV--------------- 143 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------------
T ss_pred EEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC---------------
Confidence 99999997643221 2234567889999999888877542 3689999998765432
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
.+.+.|+.+|...|.+++.++.+ .+++++++||+.++++..... ......
T Consensus 144 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-------~~~~~~-- 196 (244)
T 3d3w_A 144 ------------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT-------WSDPHK-- 196 (244)
T ss_dssp ------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH-------SCSTTH--
T ss_pred ------------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh-------ccChHH--
Confidence 13347999999999999988765 489999999999999853200 000011
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...+.... ....+++++|+|++++.++.... ...|+.|++.++
T Consensus 197 --~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 3d3w_A 197 --AKTMLNRI---------PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp --HHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --HHHHHhhC---------CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 11122221 12368899999999999997542 246889999986
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=186.21 Aligned_cols=188 Identities=14% Similarity=0.105 Sum_probs=148.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---ccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---ADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~d~V 93 (390)
+|+||||||+|+||++++++|+ + |++|++++|++. .+.+|++|.+++++++++ +|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K-KAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T-TSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 3589999999999999999999 8 999999999752 367999999999998876 8999
Q ss_pred EEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCcccccc
Q 016370 94 INLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVL 166 (390)
Q Consensus 94 ih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~ 166 (390)
||+||........ ++....+++|+.++.++++++.+. +.++|++||...+...
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------- 122 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-------------------- 122 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC--------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC--------------------
Confidence 9999976432222 223456779999999999999876 4799999997654321
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
.+...|+.+|...|.+.+.++.+. +++++++||+.++++... .
T Consensus 123 -------------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----------------------~ 167 (202)
T 3d7l_A 123 -------------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK----------------------L 167 (202)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH----------------------H
T ss_pred -------------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh----------------------h
Confidence 133479999999999999987664 899999999999987311 0
Q ss_pred hcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEec
Q 016370 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290 (390)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~ 290 (390)
++....+++++++|+|++++.++... ..|++||+.
T Consensus 168 ---------~~~~~~~~~~~~~dva~~~~~~~~~~--~~G~~~~vd 202 (202)
T 3d7l_A 168 ---------EPFFEGFLPVPAAKVARAFEKSVFGA--QTGESYQVY 202 (202)
T ss_dssp ---------GGGSTTCCCBCHHHHHHHHHHHHHSC--CCSCEEEEC
T ss_pred ---------hhhccccCCCCHHHHHHHHHHhhhcc--ccCceEecC
Confidence 11123457899999999999988654 467889873
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-24 Score=188.68 Aligned_cols=210 Identities=12% Similarity=0.157 Sum_probs=160.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------cc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------MA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------~~ 90 (390)
+|+||||||+|+||++++++|+++ |++|++++|++. . ..+.++.+|++|.+++.++++ ++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR-GYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 578999999999999999999999 999999999764 1 245889999999999998887 68
Q ss_pred cEEEEeccccCCccccC--------ChhHHHHHhhhhHHHHHHHHHhCC-----------CcEEEeecccccccccCCCC
Q 016370 91 DLTINLAAICTPADYNT--------RPLDTIYSNFIDALPVVKYCSENN-----------KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~--------~~~~~~~~nv~~~~~l~~~~~~~~-----------~~~v~~Ss~~vy~~~~~~~~ 151 (390)
|+|||+||......... +....+++|+.++.++++++.+.. .++|++||...+....
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 143 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---- 143 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT----
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence 99999999764322111 456778899999999999886431 2899999988765421
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
+.+.|+.+|...+.+.+.++.+ .|++++++||+.++++...
T Consensus 144 -----------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~------- 187 (242)
T 1uay_A 144 -----------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ------- 187 (242)
T ss_dssp -----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH-------
T ss_pred -----------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh-------
Confidence 3347999999999998887655 3899999999999987533
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcc
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~ 296 (390)
.+...+...+....++ . ..+++++|+|++++.++.. ....|+.|++.++ ..+
T Consensus 188 ------~~~~~~~~~~~~~~~~--~------~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG-~~~ 239 (242)
T 1uay_A 188 ------GLPEKAKASLAAQVPF--P------PRLGRPEEYAALVLHILEN-PMLNGEVVRLDGA-LRM 239 (242)
T ss_dssp ------TSCHHHHHHHHTTCCS--S------CSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTT-CCC
T ss_pred ------ccchhHHHHHHhhCCC--c------ccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCC-eec
Confidence 1111222333333222 0 2378899999999999987 4357899999986 443
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-24 Score=190.16 Aligned_cols=213 Identities=14% Similarity=0.112 Sum_probs=162.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|+..... ...+.++.+|++|.+++.++++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDR-NYRVVATSRSIKPSA----------DPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCCCCS----------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcc----------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 45689999999999999999999999 999999999765322 2378899999999999988876
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+.....
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------- 164 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG---------- 164 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC----------
Confidence 5999999999875332 22344567789999999999877 4555 89999999776543211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|...+.+.+.++.+. |+++.+++|+.+++|... ..
T Consensus 165 ---------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~------------~~ 211 (260)
T 3un1_A 165 ---------------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP------------AE 211 (260)
T ss_dssp ---------------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC------------GG
T ss_pred ---------------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC------------HH
Confidence 134579999999999999888776 899999999999998643 01
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcc
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~ 296 (390)
.. ....... ....+.+++|+|++++.+.+.. ...|++|++.+| ...
T Consensus 212 ~~----~~~~~~~---------p~~r~~~~~dva~av~~L~~~~-~itG~~i~vdGG-~~~ 257 (260)
T 3un1_A 212 TH----STLAGLH---------PVGRMGEIRDVVDAVLYLEHAG-FITGEILHVDGG-QNA 257 (260)
T ss_dssp GH----HHHHTTS---------TTSSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTT-GGG
T ss_pred HH----HHHhccC---------CCCCCcCHHHHHHHHHHhcccC-CCCCcEEEECCC-eec
Confidence 11 1112222 2234678999999999995543 357899999997 443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=193.48 Aligned_cols=223 Identities=15% Similarity=0.080 Sum_probs=148.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh------
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI------ 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~------ 87 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++........... ....+.++.+|+.|.+++.+++
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987654433221110 1346889999999999888887
Q ss_pred --ccccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 88 --KMADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 88 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------- 159 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS--------- 159 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC---------
Confidence 35899999999764321 22344567889999999999888 4455 8999999987654321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+.+.|+.+|...|.+.+.++.+. +++++++||+.+++|.... .
T Consensus 160 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~- 205 (266)
T 1xq1_A 160 ------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA---------V- 205 (266)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------
T ss_pred ------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhh---------h-
Confidence 23479999999999998887654 8999999999999986431 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....+....... .....+++++|+|+++..++.... ...|+.|++.++
T Consensus 206 --~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 254 (266)
T 1xq1_A 206 --YDDEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 254 (266)
T ss_dssp -----------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred --cCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence 001111111111 112247889999999999886532 235889999996
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-24 Score=189.33 Aligned_cols=226 Identities=13% Similarity=0.158 Sum_probs=163.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+.+....+...... ...++.++.+|++|.+++.++++
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRM-EGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987654332211100 13468999999999999988876
Q ss_pred --cccEEEEeccccC-Ccc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICT-PAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~-~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||... ... ...+....+++|+.++.++++++.. .+ .++|++||...+.....
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------- 159 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP-------- 159 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC--------
Confidence 5899999999764 211 1123356788999999999888754 34 79999999765432110
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.|.+.|+.+|...|.+++.++.+ .+++++++||+.+++|.... .
T Consensus 160 -----------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~---------~- 206 (260)
T 3awd_A 160 -----------------------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF---------G- 206 (260)
T ss_dssp -----------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH---------H-
T ss_pred -----------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc---------c-
Confidence 12357999999999999988766 68999999999999986420 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+...+..+.+ ...+++++|+|+++..++.... ...|+.|++.++
T Consensus 207 -~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 256 (260)
T 3awd_A 207 -MEKPELYDAWIAGTP---------MGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG 256 (260)
T ss_dssp -HTCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -cCChHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence 001122333333322 1247889999999999987532 246789999986
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=187.64 Aligned_cols=222 Identities=15% Similarity=0.170 Sum_probs=161.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|+||||||+|+||++++++|+++ |++|++++|+.+....+..........++.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999 99999999987654433221101113468899999999999988886 6
Q ss_pred ccEEEEeccccCCcc-------ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPAD-------YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 150 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP---------- 150 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------
Confidence 899999999764322 12345567889999987766655 3445 8999999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+.+.|+.+|...|.+.+.++.+. +++++++||+.+++|.... .
T Consensus 151 -----------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~ 196 (250)
T 2cfc_A 151 -----------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW-----------R 196 (250)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH-----------H
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc-----------c
Confidence 33479999999999998887654 8999999999999986430 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+...+....| ...+.+.+|+|++++.++..+. ...|+.+++.+|
T Consensus 197 ~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 246 (250)
T 2cfc_A 197 LDQPELRDQVLARIP---------QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA 246 (250)
T ss_dssp HTSHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred cCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence 000122233333322 1247789999999999997643 245889999886
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-25 Score=189.23 Aligned_cols=195 Identities=15% Similarity=0.153 Sum_probs=151.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~d~Vi 94 (390)
|+||||||+|+||++++++|+++ +|++++|++.....+.... .. .++.+|++|.+++.++++ ++|+||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~-----~~-~~~~~D~~~~~~~~~~~~~~~~id~vi 71 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREV-----GA-RALPADLADELEAKALLEEAGPLDLLV 71 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHH-----TC-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhc-----cC-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999986 9999999876554433211 12 788999999999999998 799999
Q ss_pred EeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 95 NLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 95 h~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+||...... ..++....+++|+.++.++++++++.+ .+||++||...|...
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~----------------------- 128 (207)
T 2yut_A 72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV----------------------- 128 (207)
T ss_dssp ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------------------
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------------------
Confidence 9999764321 234556788899999999999997766 899999998877432
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
.+.+.|+.+|...|.+++.++.+ .|++++++||+.++++...
T Consensus 129 ----------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~------------------------- 173 (207)
T 2yut_A 129 ----------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA------------------------- 173 (207)
T ss_dssp ----------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-------------------------
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-------------------------
Confidence 13457999999999999988766 5899999999999887311
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEE
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFN 288 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~n 288 (390)
+.+...+.+++++|+|++++.++..+. .+.+++
T Consensus 174 -------~~~~~~~~~~~~~dva~~~~~~~~~~~--~~~~~~ 206 (207)
T 2yut_A 174 -------PLGGPPKGALSPEEAARKVLEGLFREP--VPALLE 206 (207)
T ss_dssp -------GGTSCCTTCBCHHHHHHHHHHHHC--C--CCSCCC
T ss_pred -------ccCCCCCCCCCHHHHHHHHHHHHhCCC--Cccccc
Confidence 011233579999999999999998764 344443
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-24 Score=191.82 Aligned_cols=227 Identities=11% Similarity=0.093 Sum_probs=164.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+++....+..........++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 99999999987654433221100002468899999999999988876
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...|....
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 152 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW----------- 152 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------
Confidence 5899999999764321 122345678899999998888764 344 7999999987765421
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+ .|++++++||+.+++|... .
T Consensus 153 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~ 197 (263)
T 3ai3_A 153 ----------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI-------------K 197 (263)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH-------------H
T ss_pred ----------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh-------------h
Confidence 2347999999999999888765 5899999999999987432 1
Q ss_pred hH-----------HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 236 VL-----------ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 236 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
.. ..+........ .....+.+++|+|++++.++.... ...|+.|++.+| ...|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG-~~~s 262 (263)
T 3ai3_A 198 TAKELTKDNGGDWKGYLQSVADEH--------APIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG-MLKT 262 (263)
T ss_dssp HHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT-CCCC
T ss_pred hhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC-cccc
Confidence 11 11111111110 112358899999999999987643 235889999997 5554
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=191.36 Aligned_cols=223 Identities=13% Similarity=0.121 Sum_probs=160.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++....+...........+.++.+|++|.+++.++++
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999999 99999999987654433221100012468899999999999988886
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ...+....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 152 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV---------- 152 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC----------
Confidence 6999999999764321 22344567889999997666654 4445 7999999975432210
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .+++++++||+.++++...
T Consensus 153 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~------------- 196 (248)
T 2pnf_A 153 -----------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA------------- 196 (248)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-------------
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh-------------
Confidence 2237999999999998887654 4799999999999987543
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+...+........+ ...+++++|+|+++..++.... ...|++|++.++
T Consensus 197 ~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 197 VLSEEIKQKYKEQIP---------LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp GSCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hccHHHHHHHHhcCC---------CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 011111122222211 1247899999999999987532 245889999985
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=195.71 Aligned_cols=234 Identities=14% Similarity=0.072 Sum_probs=162.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++| ++.....+...... ...++.++.+|++|.+++.++++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKK-LGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 466789999999999999999999999 999999999 44433322111000 13468899999999999988887
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeeccccc-ccccCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVY-GKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy-~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ...+....+++|+.++.++++++.+. +.++|++||...| ....
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 165 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------- 165 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----------
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC----------
Confidence 6899999999764321 12234567889999999999888664 3799999998776 3211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...|.+++.++.+. +++++++||+.++++..........|.. ..
T Consensus 166 -----------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~ 221 (274)
T 1ja9_A 166 -----------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGG-YK 221 (274)
T ss_dssp -----------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTC-CT
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccc-cc
Confidence 23479999999999999887654 8999999999998864220000000000 00
Q ss_pred hhH-HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 235 RVL-ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
... ..+......+ .....+++++|+|+++..++..... ..|++|++++|
T Consensus 222 ~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 222 GMPQEKIDEGLANM---------NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp TCCHHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCchHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 000 1111122222 2234689999999999999976432 36889999986
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-24 Score=194.59 Aligned_cols=245 Identities=13% Similarity=0.153 Sum_probs=177.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC--CCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG--ADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+.+|+||||||+|+||++++++|+++ |++|++++|+++............. ...+.++.+|++|.+++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999 9999999998765544322211111 1268899999999998888876
Q ss_pred ----cccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||..... ...++....+++|+.++.++++++... + .++|++||...+....
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 159 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR------- 159 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC-------
Confidence 479999999973221 112234567889999999998877543 2 5999999987664321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
+.+.|+.+|...+.+.+.++.+. ++++.+++|+.++++....
T Consensus 160 --------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--------- 204 (281)
T 3svt_A 160 --------------------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA--------- 204 (281)
T ss_dssp --------------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH---------
T ss_pred --------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---------
Confidence 23479999999999999887654 6999999999998875320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc-HHHHHHHHHHHh
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT-VRQLAEMMTEVY 309 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s-~~~l~~~i~~~~ 309 (390)
. .....+........| ...+.+++|+|++++.++.... ...|++|++.+| ...+ ..++++++.+.+
T Consensus 205 -~-~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG-~~~~~~~~~~~~~~~~~ 272 (281)
T 3svt_A 205 -I-TESAELSSDYAMCTP---------LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGG-QMLRRGPDFSAMLEPVF 272 (281)
T ss_dssp -H-HTCHHHHHHHHHHCS---------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGGSCCCCCHHHHHHHH
T ss_pred -c-ccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCC-hhcccCCcchhcccccc
Confidence 0 000112222222222 2246679999999999987542 236899999997 5666 778899998888
Q ss_pred hccc
Q 016370 310 AKVS 313 (390)
Q Consensus 310 g~~~ 313 (390)
+.+.
T Consensus 273 ~~~~ 276 (281)
T 3svt_A 273 GRDA 276 (281)
T ss_dssp CTTG
T ss_pred CCcc
Confidence 8643
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=185.14 Aligned_cols=222 Identities=13% Similarity=0.093 Sum_probs=160.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCe-eEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRI-QFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i-~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+++....+.... ...+ .++.+|++|.+.+.++++
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQEL----GAAVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence 56789999999999999999999999 999999999876554332211 1345 889999999999988774
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||........ ++....+++|+.++.++++++ ++.+ .++|++||...+.....
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------- 153 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP---------- 153 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS----------
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC----------
Confidence 589999999987543222 223467779999977766654 4445 89999999876543210
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.|.+.|+.+|...|.+.+.++.+. +++++++||+.++++.... ..
T Consensus 154 ---------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~----------~~- 201 (254)
T 2wsb_A 154 ---------------------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK----------MR- 201 (254)
T ss_dssp ---------------------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHH----------HH-
T ss_pred ---------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhc----------cc-
Confidence 133579999999999998887654 8999999999999874320 00
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....+...+....+ ...+++++|+|++++.++.... ...|+.+++.++
T Consensus 202 ~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 202 ERPELFETWLDMTP---------MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp TCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 00122222322222 1347899999999999986532 246889999886
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=184.65 Aligned_cols=220 Identities=16% Similarity=0.147 Sum_probs=162.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
.+|++|||||+|+||++++++|+++ |++|++++++. .....+.+... ....++.++.+|++|.+++.++++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEE-GYNVAVNYAGSKEKAEAVVEEIK-AKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999999999 99999988755 32222211111 123578899999999999888876
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 149 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP----------- 149 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----------
Confidence 5899999999875322 12334557889999999999988 4445 7999999976553321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++. ..|+++.+++|+.+.++... .
T Consensus 150 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-------------~ 194 (246)
T 3osu_A 150 ----------------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-------------A 194 (246)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS-------------C
T ss_pred ----------------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc-------------c
Confidence 334799999999999888776 45899999999999988654 1
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+...+...+..+.|+ ..+.+.+|+|+++..++.... ...|++|++.+|
T Consensus 195 ~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG 243 (246)
T 3osu_A 195 LSDELKEQMLTQIPL---------ARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243 (246)
T ss_dssp SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 223333444444332 236678999999999887543 245899999986
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-23 Score=184.89 Aligned_cols=219 Identities=10% Similarity=0.026 Sum_probs=161.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|++......... ...++.++.+|++|.+++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAG----LENGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----CTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----HhcCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987655443321 12367889999999999988887
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ..++....+++|+.++.++++++... ..++|++||...+....
T Consensus 84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (263)
T 3ak4_A 84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP--------- 154 (263)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC---------
Confidence 6999999999764321 12244567889999999988877532 37999999976543210
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|++++++||+.++++...
T Consensus 155 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------ 198 (263)
T 3ak4_A 155 ------------------------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE------------ 198 (263)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH------------
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh------------
Confidence 2347999999999999888655 3899999999999887422
Q ss_pred hhhH-----------HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVL-----------ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ........... ....+++++|+|++++.++.... ...|+.|++.+|
T Consensus 199 -~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 259 (263)
T 3ak4_A 199 -REIIWEAELRGMTPEAVRAEYVSLT---------PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259 (263)
T ss_dssp -HHHHHHHHHHTSCHHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred -hhccccccccccCcHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence 111 11111111111 12348899999999999987642 246789999986
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-23 Score=184.35 Aligned_cols=234 Identities=16% Similarity=0.176 Sum_probs=171.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|+........... ..++.++.+|++|.+++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999999876654433221 3578899999999999988887
Q ss_pred --cccEEEEeccccCCc------cccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA------DYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||..... ...++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------- 154 (271)
T 3tzq_B 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD-------- 154 (271)
T ss_dssp HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS--------
T ss_pred cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC--------
Confidence 589999999987331 122334567889999999999988 5555 8999999987654321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+ +|+++.+++|+.+++|.... .
T Consensus 155 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---------~ 200 (271)
T 3tzq_B 155 -------------------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV---------G 200 (271)
T ss_dssp -------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----------
T ss_pred -------------------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc---------c
Confidence 3347999999999999988766 68999999999999986531 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHH
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTE 307 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~ 307 (390)
+...+........+. ..+...+|+|++++.++.... ...|+++++.+| .......+.+....
T Consensus 201 ---~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG-~~~~~~~~~~~~~~ 263 (271)
T 3tzq_B 201 ---LPQPIVDIFATHHLA---------GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG-LLAHLPGLPQIRAS 263 (271)
T ss_dssp ----CHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-TTTBCTTHHHHHHH
T ss_pred ---CCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC-ccccCCCccccCCc
Confidence 111222233332221 236679999999999987542 246899999987 44333333333333
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=190.76 Aligned_cols=222 Identities=14% Similarity=0.082 Sum_probs=161.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+ +.....+...... ...++.++.+|++|.+++.++++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDETIASMRA-DGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999 9999999998 5544332211100 13478899999999999988887
Q ss_pred ---cccEEEEeccc-cCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC------CcEEEeecccccc-cccCC
Q 016370 89 ---MADLTINLAAI-CTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN------KRLIHFSTCEVYG-KTIGS 149 (390)
Q Consensus 89 ---~~d~Vih~a~~-~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~------~~~v~~Ss~~vy~-~~~~~ 149 (390)
++|+|||+||. ..... ..++....+++|+.++.++++++.. .+ .++|++||...+. ..
T Consensus 82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--- 158 (258)
T 3afn_B 82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG--- 158 (258)
T ss_dssp HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC---
T ss_pred HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC---
Confidence 69999999997 32211 1123445778999999988876532 11 6899999976654 11
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
.+.+.|+.+|...|.+.+.++.+. +++++++||+.++++....
T Consensus 159 ------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~---- 204 (258)
T 3afn_B 159 ------------------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD---- 204 (258)
T ss_dssp ------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT----
T ss_pred ------------------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc----
Confidence 133479999999999998876554 8999999999999986431
Q ss_pred CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEecCC
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVGNP 292 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~~~ 292 (390)
....+...+..+.+ ...+++++|+|++++.++.... ...|+.|++.++
T Consensus 205 ---------~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg 254 (258)
T 3afn_B 205 ---------KTQDVRDRISNGIP---------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254 (258)
T ss_dssp ---------CCHHHHHHHHTTCT---------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred ---------cCHHHHHHHhccCC---------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence 11222333333322 2358899999999999987532 235889999986
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=188.03 Aligned_cols=223 Identities=13% Similarity=0.119 Sum_probs=165.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|+.................++.++.+|++|.++++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999988765544332222122478899999999998887775
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeeccccc-ccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVY-GKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy-~~~~~~~~~e~~~ 156 (390)
.+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+ ...
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~---------- 186 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY---------- 186 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC----------
Confidence 4799999999875422 22344567889999999999887 3445 899999997542 111
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++||.+++|...
T Consensus 187 -----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~------------ 231 (293)
T 3rih_A 187 -----------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV------------ 231 (293)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH------------
T ss_pred -----------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh------------
Confidence 13347999999999999888765 4899999999999987432
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+........|+. -+...+|+|+++..++.... ...|+++++.+|
T Consensus 232 -~~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG 281 (293)
T 3rih_A 232 -DMGEEYISGMARSIPMG---------MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281 (293)
T ss_dssp -HTCHHHHHHHHTTSTTS---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hccHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 11223334444443331 24568999999999886532 246899999987
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=185.22 Aligned_cols=222 Identities=13% Similarity=0.083 Sum_probs=159.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
++++|+||||||+|+||++++++|+++ |++|++++| +.+....+...... ....+.++.+|++|.+++.++++
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 467789999999999999999999999 999999999 55433322211100 12468899999999998888876
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||...... ...+....+++|+.++.++++++... ..++|++||...+...
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------- 152 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW--------- 152 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC---------
Confidence 5899999999764321 12344567889999999888766432 3699999997654221
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+.+.|+.+|...+.+.+.++.+. +++++++||+.+++|...
T Consensus 153 ------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----------- 197 (261)
T 1gee_A 153 ------------------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----------- 197 (261)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH-----------
T ss_pred ------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh-----------
Confidence 134579999999998888776553 899999999999988532
Q ss_pred chhhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ......+....+ ...+++++|+|++++.++.... ...|+.+++.++
T Consensus 198 --~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 249 (261)
T 1gee_A 198 --EKFADPEQRADVESMIP---------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp --HHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --hcccChhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence 110 112222222211 1247899999999999987532 246889999986
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-23 Score=182.97 Aligned_cols=222 Identities=14% Similarity=0.196 Sum_probs=158.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|++++|+.......... ....+.++.+|++|.+++.++++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAE----LGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHH----hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987665544332 13478899999999999988886
Q ss_pred --cccEEEEeccccCCcc--------ccCChhHHHHHhhhhHHHHHHHHHhC----------C-CcEEEeeccccccccc
Q 016370 89 --MADLTINLAAICTPAD--------YNTRPLDTIYSNFIDALPVVKYCSEN----------N-KRLIHFSTCEVYGKTI 147 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-~~~v~~Ss~~vy~~~~ 147 (390)
++|+|||+||...... ..++....+++|+.++.++++++... + .++|++||...+....
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI 158 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence 5999999999874321 12345567889999999999887643 3 6799999987654321
Q ss_pred CCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCC
Q 016370 148 GSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIP 224 (390)
Q Consensus 148 ~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~ 224 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+.++...
T Consensus 159 ---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--- 202 (257)
T 3tpc_A 159 ---------------------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA--- 202 (257)
T ss_dssp ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred ---------------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc---
Confidence 2347999999999998887766 6899999999999987543
Q ss_pred CCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcc
Q 016370 225 GIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296 (390)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~ 296 (390)
.+............|. ...+..++|+|+++..++.. ....|+.+++.+| ..+
T Consensus 203 ----------~~~~~~~~~~~~~~p~--------~~r~~~~~dva~~v~~l~s~-~~itG~~i~vdGG-~~~ 254 (257)
T 3tpc_A 203 ----------GMPQDVQDALAASVPF--------PPRLGRAEEYAALVKHICEN-TMLNGEVIRLDGA-LRM 254 (257)
T ss_dssp ---------------------CCSSS--------SCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTT-CCC
T ss_pred ----------cCCHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHccc-CCcCCcEEEECCC-ccC
Confidence 1111111111111111 03478899999999999987 4467899999997 444
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=185.53 Aligned_cols=220 Identities=16% Similarity=0.163 Sum_probs=150.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||++++++|+++ |++|+++ .|++.....+...... ...++.++.+|++|.+++.++++
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~-G~~V~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNM-GANIVLNGSPASTSLDATAEEFKA-AGINVVVAKGDVKNPEDVENMVKTAMDA 80 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECTTCSHHHHHHHHHHH-TTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCcCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999999 9999999 5555443322111100 13468899999999999988876
Q ss_pred --cccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecc-cccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTC-EVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~-~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||..... ....+....+++|+.++.++++++.. .+ .++|++||. ..|+..
T Consensus 81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 150 (247)
T 2hq1_A 81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA---------- 150 (247)
T ss_dssp HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----------
Confidence 589999999976422 12345567889999998888877643 44 799999996 344321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...|.+.+.++.+. ++++++++|+.+.++...
T Consensus 151 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------ 194 (247)
T 2hq1_A 151 ------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD------------ 194 (247)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------------
T ss_pred ------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh------------
Confidence 23479999999999998886554 899999999998776322
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+...+......+.+ ...+++++|+|+++..++.... ...+++||+.++
T Consensus 195 -~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 244 (247)
T 2hq1_A 195 -VLPDKVKEMYLNNIP---------LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244 (247)
T ss_dssp -TSCHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hcchHHHHHHHhhCC---------CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence 011112222222222 2347899999999999887542 235789999986
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-23 Score=186.42 Aligned_cols=234 Identities=15% Similarity=0.179 Sum_probs=160.9
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
..++.+|++|||||+|+||++++++|+++ |++|++++|+. .....+...........+.++.+|++|.+++.++++
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 34577889999999999999999999999 99999999954 333322221111123578999999999999988876
Q ss_pred -----cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCC
Q 016370 89 -----MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 171 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP------- 171 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC-------
Confidence 5899999999875432 22334567889999999999887 3444 7899999976553321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
....|+.+|...+.+.+.++.+ .|+++.+++||.+.+|....
T Consensus 172 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--------- 216 (281)
T 3v2h_A 172 --------------------------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK--------- 216 (281)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------
T ss_pred --------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh---------
Confidence 2347999999999999888765 48999999999999885430
Q ss_pred CchhhHHHHHH--HHhcCCC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSN--NLLRRQP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....... ....... .....++.....+++++|+|++++.++.... ...|+++++.+|
T Consensus 217 ----~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG 277 (281)
T 3v2h_A 217 ----QIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG 277 (281)
T ss_dssp ---------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred ----hcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence 1100000 0000000 0112234455679999999999999987643 246899999986
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-23 Score=183.26 Aligned_cols=214 Identities=14% Similarity=0.166 Sum_probs=159.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++....+.... ...+.++.+|++|.+++.++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAEL----ADAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----hcCceEEEecCCCHHHHHHHHHHHHHH
Confidence 367789999999999999999999999 999999999876554332211 1257889999999999988887
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.+++++ +++.+ .++|++||...+....
T Consensus 79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 148 (260)
T 1nff_A 79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV---------- 148 (260)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC----------
Confidence 6999999999764321 1234456788999999655554 44555 8999999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|++++++||+.++++...+ .
T Consensus 149 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~ 194 (260)
T 1nff_A 149 -----------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW-----------V 194 (260)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT-----------S
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc-----------c
Confidence 2347999999999999887765 58999999999999875320 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...+. ......+.+++|+|++++.++.... ...|+.|++.++
T Consensus 195 ------------~~~~~----~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG 237 (260)
T 1nff_A 195 ------------PEDIF----QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237 (260)
T ss_dssp ------------CTTCS----CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ------------hhhHH----hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 00000 0112347889999999999987532 235789999986
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-24 Score=190.73 Aligned_cols=227 Identities=11% Similarity=0.062 Sum_probs=163.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++.+|+||||||+|+||+++++.|+++ |++|++++|+.+........... ...++.++.+|++|.+++..+++
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRTVATLQG-EGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999 99999999987654432211100 13468889999999998888776
Q ss_pred ---cccEEEEeccccCC-c----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTP-A----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||.... . ...++....+++|+.++.++++++. +.+ .++|++||...|....
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 159 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP-------- 159 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC--------
Confidence 59999999997531 1 1122345678899999988888764 445 7999999987764321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+. |+++++++|+.+.++...
T Consensus 160 -------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----------- 203 (260)
T 2zat_A 160 -------------------------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ----------- 203 (260)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH-----------
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch-----------
Confidence 33479999999999998887654 899999999999887432
Q ss_pred chhhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 233 VPRVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 233 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
... .......... .....+.+++|+|+++..++.... ...|++|++.+| ...|
T Consensus 204 --~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG-~~~s 259 (260)
T 2zat_A 204 --VLWMDKARKEYMKES---------LRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG-TASR 259 (260)
T ss_dssp --HHHSSHHHHHHHHHH---------HTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTT-CCCC
T ss_pred --hcccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCC-cccc
Confidence 000 0000111111 112347899999999999987543 236889999997 5654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=188.00 Aligned_cols=229 Identities=14% Similarity=0.079 Sum_probs=162.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI------- 87 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~------- 87 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+++........... ...++.++.+|++|.+++.+++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 99999999987654433221110 1346888999999999888887
Q ss_pred -ccccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 88 -KMADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 88 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 154 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP---------- 154 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT----------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC----------
Confidence 35999999999764321 123445678899999999988873 445 7999999986653211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...|.+.+.++.+. ++++++++|+.+.++..... ....
T Consensus 155 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~ 204 (260)
T 2ae2_A 155 -----------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT-------IQDP 204 (260)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH-------TTSH
T ss_pred -----------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhh-------ccCh
Confidence 23479999999999999887654 89999999999987632100 0000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.. ...+....... ....+.+++|+|++++.++.... ...|+.+++.+| ...
T Consensus 205 ~~-~~~~~~~~~~~---------~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG-~~~ 256 (260)
T 2ae2_A 205 EQ-KENLNKLIDRC---------ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG-LMA 256 (260)
T ss_dssp HH-HHHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGG
T ss_pred hh-HHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC-ccc
Confidence 00 01111222221 12347899999999999886532 246889999986 443
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=185.80 Aligned_cols=219 Identities=15% Similarity=0.134 Sum_probs=154.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeE-EeCCCCChhHHHHhhc------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQF-HRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~-~~~D~~d~~~~~~~~~------ 88 (390)
||+||||||+|+||++++++|+++ |++|+++ +|+.+....+...... ....+.. +.+|++|.++++++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED-GFALAIHYGQNREKAEEVAEEARR-RGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESSCHHHHHHHHHHHHH-TTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHh-cCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999 9999998 7776544332211100 1235566 8999999998888765
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHH----HHHHHhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPV----VKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l----~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++ ++++++.+ .++|++||...+....
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----------- 147 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------
Confidence 5999999999764321 1234456788999995544 45555566 8999999975443211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+.+.|+.+|...+.+.+.++.+. +++++++||+.++++... .
T Consensus 148 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~ 192 (245)
T 2ph3_A 148 ----------------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE-------------R 192 (245)
T ss_dssp ----------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------------T
T ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchh-------------h
Confidence 23479999999999988876654 899999999999887432 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+...+........+ ...+++++|+|+++..++.... ...|+.|++.++
T Consensus 193 ~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 241 (245)
T 2ph3_A 193 LPQEVKEAYLKQIP---------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG 241 (245)
T ss_dssp SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 11112222222221 2347899999999999987642 235889999986
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=187.90 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=162.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+.................++.++.+|++|.++++++++.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 366789999999999999999999999 999999999654432211110000134788999999999988887764
Q ss_pred ---ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC-----C-CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|+|||+||...... ..++....+++|+.++.++++++... . .+||++||...+...... ..+
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~~~ 165 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----LNG 165 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----TTE
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc----ccc
Confidence 899999999864321 12334567889999999999887542 2 689999998765432110 000
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
..+...|+.+|...|.+++.++.+ .|++++++||+.++++....
T Consensus 166 ----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------- 212 (265)
T 1h5q_A 166 ----------------------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH----------- 212 (265)
T ss_dssp ----------------------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-----------
T ss_pred ----------------------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc-----------
Confidence 014558999999999999888755 48999999999999885431
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....+........+ ...+++++|+|++++.++.... ...|+.|++.+|
T Consensus 213 --~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 261 (265)
T 1h5q_A 213 --MDKKIRDHQASNIP---------LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261 (265)
T ss_dssp --SCHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred --cchhHHHHHHhcCc---------ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence 11112222222221 1237789999999999987642 246889999986
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=181.91 Aligned_cols=231 Identities=15% Similarity=0.048 Sum_probs=170.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|++++|+++....+.... ..++.++.+|++|.+++..+++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999 999999999877655443321 2478899999999998887765
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|++||+||...... ..++....+++|+.++.++++++...- .++|++||...+....
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 147 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP------------ 147 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT------------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC------------
Confidence 4899999999875432 223455678899999999999987642 6899999987654321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...+.+.+.++.+. |+++.+++|+.+..|.... .......
T Consensus 148 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~~~~~~~ 199 (255)
T 4eso_A 148 ---------------------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV-------AGITEAE 199 (255)
T ss_dssp ---------------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC-------TTSCHHH
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc-------ccCChhh
Confidence 33479999999999998887664 8999999999999885431 0011111
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHH
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~ 299 (390)
...+........| ...+...+|+|++++.++.......|+.+++.+| ...++.
T Consensus 200 ~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG-~~~~l~ 252 (255)
T 4eso_A 200 RAEFKTLGDNITP---------MKRNGTADEVARAVLFLAFEATFTTGAKLAVDGG-LGQKLS 252 (255)
T ss_dssp HHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTT-TTTTBC
T ss_pred HHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCC-ccccCc
Confidence 2222222222222 1235679999999999887644457899999997 555543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.6e-23 Score=183.88 Aligned_cols=223 Identities=12% Similarity=0.093 Sum_probs=164.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|++|||||+|+||++++++|.++ |++|++++|+.+...............++.++.+|++|.++++++++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987665443322211122578999999999999888876
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeeccccc-ccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVY-GKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy-~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++... + .++|++||...+ ...
T Consensus 86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------- 155 (262)
T 3pk0_A 86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY---------- 155 (262)
T ss_dssp HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC----------
Confidence 59999999998753222 2234456889999999988877554 5 899999996532 110
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++|+.++++...
T Consensus 156 -----------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------------ 200 (262)
T 3pk0_A 156 -----------------------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLL------------ 200 (262)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH------------
T ss_pred -----------------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccc------------
Confidence 13347999999999999988766 5899999999999987432
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+...+....|. ..+...+|+|+++..++.... ...|+++++.+|
T Consensus 201 -~~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG 250 (262)
T 3pk0_A 201 -ENGEEYIASMARSIPA---------GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250 (262)
T ss_dssp -TTCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -ccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 0112233333333322 236679999999999887532 246899999987
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=187.15 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=164.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+.................++.++.+|++|.++++++++
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987532221111111124578999999999998888776
Q ss_pred --cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+||...... ..++....+++|+.++.++++++...- .++|++||...+....
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 191 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----------- 191 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------
Confidence 4899999999764321 223456788899999999999987653 6899999987764421
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+. |+++.+++|+.+++|... ..
T Consensus 192 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~------------~~ 237 (291)
T 3ijr_A 192 ----------------------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIP------------SS 237 (291)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHH------------HH
T ss_pred ----------------------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccc------------cc
Confidence 23479999999999998887654 899999999999887421 00
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+-......... ......+.+++|+|++++.++.... ...|+++++.+|
T Consensus 238 ~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 286 (291)
T 3ijr_A 238 FDEKKVSQFGS---------NVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGG 286 (291)
T ss_dssp SCHHHHHHTTT---------TSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCHHHHHHHHc---------cCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence 00111112111 2223457789999999999987542 246899999986
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=182.00 Aligned_cols=224 Identities=13% Similarity=0.147 Sum_probs=160.7
Q ss_pred CCCCCEEEEEcCchh-HHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGF-IGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~-iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+ ||++++++|+++ |++|++++|+.................++.++.+|++|.++++++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 467889999999985 999999999999 99999999987665443332212223579999999999999888876
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC-----C-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||...... ..++....+++|+.++.++++++... + .++|++||...+...
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 168 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ--------- 168 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC---------
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC---------
Confidence 4799999999865422 12234567889999999998877543 3 689999997654322
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+....
T Consensus 169 ------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------- 214 (266)
T 3o38_A 169 ------------------------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK---------- 214 (266)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------
T ss_pred ------------------------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhc----------
Confidence 13457999999999999888765 58999999999998775320
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......... .........+.+++|+|++++.++.... ...|+++++.+|
T Consensus 215 --~~~~~~~~~---------~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 264 (266)
T 3o38_A 215 --TSSSELLDR---------LASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ 264 (266)
T ss_dssp -----------------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred --cCcHHHHHH---------HHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence 000011111 1112233457899999999999987532 246899999986
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.4e-23 Score=182.81 Aligned_cols=228 Identities=11% Similarity=0.054 Sum_probs=163.0
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|+||||||+ |+||+++++.|+++ |++|++++|++.....+...... ...+.++.+|++|.+++.++++
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEA--LGGALLFRADVTQDEELDALFAGVK 81 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHH--TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh--cCCcEEEECCCCCHHHHHHHHHHHH
Confidence 3567899999999 99999999999999 99999999986411111111000 1247889999999999888876
Q ss_pred ----cccEEEEeccccCC--------ccccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTP--------ADYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||.... ....++....+++|+.++.++++++... +.++|++||...+....
T Consensus 82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 155 (261)
T 2wyu_A 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------ 155 (261)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC------
Confidence 58999999997642 1122345567889999999999999776 26999999976543211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
+...|+.+|...+.+.+.++.+. |+++++++|+.+++|....
T Consensus 156 ---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------- 200 (261)
T 2wyu_A 156 ---------------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS-------- 200 (261)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG--------
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh--------
Confidence 23479999999999998887654 8999999999999985431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccH
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTV 298 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~ 298 (390)
. .....+...+....|+ ..+.+++|+|++++.++.... ...|+.|++.++ ...+.
T Consensus 201 --~-~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG-~~~~~ 256 (261)
T 2wyu_A 201 --I-PGFTKMYDRVAQTAPL---------RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG-YHIMG 256 (261)
T ss_dssp --C-TTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGGBC
T ss_pred --c-cccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC-ccccC
Confidence 0 0112222222222222 136679999999999986532 235889999997 55543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=181.85 Aligned_cols=219 Identities=14% Similarity=0.212 Sum_probs=160.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+.+......... ..++.++.+|++|.+++.++++
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAKGK 83 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367789999999999999999999999 999999999876544332211 2478999999999999988887
Q ss_pred --cccEEEEeccccCCcc----------ccCChhHHHHHhhhhHHHHHHHHHhC----------C-CcEEEeeccccccc
Q 016370 89 --MADLTINLAAICTPAD----------YNTRPLDTIYSNFIDALPVVKYCSEN----------N-KRLIHFSTCEVYGK 145 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-~~~v~~Ss~~vy~~ 145 (390)
++|+|||+||...... ..++....+++|+.++.++++++... + .++|++||...+..
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 163 (265)
T 2o23_A 84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 163 (265)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence 6999999999864321 22345567889999999999887654 4 78999999876643
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCC
Q 016370 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDF 222 (390)
Q Consensus 146 ~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~ 222 (390)
.. +...|+.+|...+.+.+.++.+ .++++++++|+.+.++....
T Consensus 164 ~~---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 210 (265)
T 2o23_A 164 QV---------------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS 210 (265)
T ss_dssp CT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred CC---------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence 21 2347999999999888877654 48999999999998875320
Q ss_pred CCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 223 IPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.-...........+. ...+++.+|+|++++.++.... ..|+.+++.++
T Consensus 211 -------------~~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~~~~-~~G~~i~vdgG 258 (265)
T 2o23_A 211 -------------LPEKVCNFLASQVPF--------PSRLGDPAEYAHLVQAIIENPF-LNGEVIRLDGA 258 (265)
T ss_dssp -------------------CHHHHTCSS--------SCSCBCHHHHHHHHHHHHHCTT-CCSCEEEESTT
T ss_pred -------------cCHHHHHHHHHcCCC--------cCCCCCHHHHHHHHHHHhhcCc-cCceEEEECCC
Confidence 000000111111111 0237789999999999997643 57889999986
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=180.81 Aligned_cols=220 Identities=17% Similarity=0.144 Sum_probs=158.4
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---c
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---M 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~ 89 (390)
...++++||||||+|+||+++++.|+++ |++|++++|+.+....+.... ...+.++.+|+++.+.+.++++ +
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNAL----KDNYTIEVCNLANKEECSNLISKTSN 84 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHh----ccCccEEEcCCCCHHHHHHHHHhcCC
Confidence 4567899999999999999999999999 999999999877655443321 2478899999999999998887 4
Q ss_pred ccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+||..... ...++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 151 (249)
T 3f9i_A 85 LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP------------- 151 (249)
T ss_dssp CSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS-------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC-------------
Confidence 89999999987532 2334667889999999999988763 233 6999999977654321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+.+.|+.+|...+.+.+.++.+ .|+++.+++|+.+.++... .+.
T Consensus 152 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------~~~ 198 (249)
T 3f9i_A 152 --------------------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD-------------KLN 198 (249)
T ss_dssp --------------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-------------------CC
T ss_pred --------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccc-------------ccC
Confidence 3347999999999998887655 4899999999999887543 111
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.........+. ....+.+++|+|+++..++.... ...|+.|++.+|
T Consensus 199 ~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG 245 (249)
T 3f9i_A 199 EKQREAIVQKI---------PLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG 245 (249)
T ss_dssp HHHHHHHHHHC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 11222222221 22357889999999999997643 246899999986
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-23 Score=183.76 Aligned_cols=228 Identities=13% Similarity=0.149 Sum_probs=167.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|++++|+.+....+...... ...++.++.+|++|.+++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQ-AGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987655443322111 23578899999999998888876
Q ss_pred --cccEEEEeccccCCcc---ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD---YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 155 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV----------- 155 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT-----------
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC-----------
Confidence 5899999999875432 223455678899999999998863 444 7999999987653321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+.++.... .
T Consensus 156 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------------~ 201 (256)
T 3gaf_A 156 ----------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT------------V 201 (256)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH------------H
T ss_pred ----------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh------------c
Confidence 3347999999999999888765 47999999999998763210 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccH
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTV 298 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~ 298 (390)
.............| ...+.+++|+|++++.++.... ...|+++++.+| ...++
T Consensus 202 ~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG-~~~~~ 255 (256)
T 3gaf_A 202 LTPEIERAMLKHTP---------LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG-GVQEL 255 (256)
T ss_dssp CCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-SCCC-
T ss_pred cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCC-ccccC
Confidence 01122222332222 2347789999999999987532 246899999997 56554
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-23 Score=186.77 Aligned_cols=222 Identities=15% Similarity=0.148 Sum_probs=161.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|+||||||+|+||+++++.|+++ |++|++++|+++....+...... ...++.++.+|++|.+++.++++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999 99999999987654433221110 13468899999999998888776
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC------C-CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN------N-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~------~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||....... .++....+++|+.++.++++++... + .++|++||...+...
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------- 167 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV--------- 167 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---------
Confidence 58999999997643211 1234567889999999999987654 5 799999997654221
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++...
T Consensus 168 ------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----------- 212 (277)
T 2rhc_B 168 ------------------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA----------- 212 (277)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH-----------
T ss_pred ------------------------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh-----------
Confidence 12347999999999999887655 4799999999999876321
Q ss_pred chhhH-----------HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVL-----------ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ........... ....+++++|+|++++.++.... ...|++|++.+|
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG 273 (277)
T 2rhc_B 213 --SVREHYSDIWEVSTEEAFDRITARV---------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273 (277)
T ss_dssp --HHHHHHHHHHTCCHHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --hhhhhcccccccchHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 111 01111111111 12348899999999999987542 246889999986
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=185.41 Aligned_cols=223 Identities=15% Similarity=0.129 Sum_probs=138.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+.+....+...... ....+.++.+|++|.++++++++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAVAKQIVA-DGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987665443322111 13578899999999999988876
Q ss_pred --cccEEEEeccccCCc-------cccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-------DYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||..... ...++....+++|+.++.++++++ ++.+ .++|++||...|..
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 154 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY--------- 154 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC---------
Confidence 589999999974211 122344567889999966655544 4444 78999999876621
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+.|+.+|...+.+.+.++.+. ++++.+++|+.+++|....
T Consensus 155 ---------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------- 198 (253)
T 3qiv_A 155 ---------------------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRT--------- 198 (253)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------
T ss_pred ---------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhh---------
Confidence 1269999999999999887765 7999999999999885431
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.....+...+..+.+ ...+..++|+|++++.++.... ...|++|++.+| ..+
T Consensus 199 ---~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG-~~~ 251 (253)
T 3qiv_A 199 ---TTPKEMVDDIVKGLP---------LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG-QII 251 (253)
T ss_dssp ---------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred ---cCcHHHHHHHhccCC---------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC-eec
Confidence 001112222222222 2335568999999999987542 236899999997 443
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-23 Score=183.61 Aligned_cols=223 Identities=15% Similarity=0.143 Sum_probs=159.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
.||+||||||+|+||++++++|+++ |++|++++|+.................++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 99999998876432221111111123478999999999999988886
Q ss_pred cccEEEEecccc--CCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 MADLTINLAAIC--TPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ~~d~Vih~a~~~--~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||.. .... ..++....+++|+.++.++++++ ++.+ .++|++||...++... .
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------~ 155 (264)
T 3i4f_A 85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG---------W 155 (264)
T ss_dssp CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC---------C
T ss_pred CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC---------C
Confidence 589999999942 1111 12334567889999999999987 5555 7999999875542211 0
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+.+.|+.+|...+.+.+.++.+ .|+++.+++|+.++++...
T Consensus 156 ----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------------- 200 (264)
T 3i4f_A 156 ----------------------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE------------- 200 (264)
T ss_dssp ----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS-------------
T ss_pred ----------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch-------------
Confidence 13457999999999999888765 5899999999999988644
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............. .....+.+++|+|+++..++.... ...|+++++.+|
T Consensus 201 ~~~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG 250 (264)
T 3i4f_A 201 ATIQEARQLKEHN---------TPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA 250 (264)
T ss_dssp CCHHHHHHC-----------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred hccHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence 1222222222211 122346789999999999997643 246899999987
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-23 Score=182.23 Aligned_cols=222 Identities=14% Similarity=0.115 Sum_probs=159.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++|+||||||+|+||++++++|+++ |++|++++|+++........... ..++.++.+|++|.+++.++++.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhc--cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987654433221111 14789999999999998888764
Q ss_pred ---ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHH----HHhCC--CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKY----CSENN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~----~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|+|||+||....... .++....+++|+.++.+++++ +++.+ .++|++||...+....
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------- 150 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------- 150 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC---------
Confidence 8999999997643221 123456788999987766554 44444 5899999987664321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh-----hcCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA-----ENGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
+.+.|+.+|...|.+.+.++. ..+++++++||+.+++|....
T Consensus 151 ------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~--------- 197 (251)
T 1zk4_A 151 ------------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD--------- 197 (251)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT---------
T ss_pred ------------------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh---------
Confidence 334799999999999887764 458999999999999875320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... ......... .....+++++|+|+++..++.... ...|+.|++.+|
T Consensus 198 -~~~~--~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 247 (251)
T 1zk4_A 198 -LPGA--EEAMSQRTK---------TPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp -STTH--HHHHTSTTT---------CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -cCch--hhhHHHhhc---------CCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 0000 011111111 112348899999999999987642 246889999986
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=180.74 Aligned_cols=226 Identities=13% Similarity=0.116 Sum_probs=159.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++. ....... .. .++.+|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~-~~~~~~~-----~~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEG-KEVAEAI-----GG-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTH-HHHHHHH-----TC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhH-HHHHHHh-----hC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 9999999998765 3322210 13 788999999998888776
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||........ ++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------- 144 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ---------- 144 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC----------
Confidence 489999999987532221 2345678899999999988764 344 7999999976543210
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .++++++++|+.+.++..
T Consensus 145 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------------- 187 (256)
T 2d1y_A 145 -----------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV-------------- 187 (256)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--------------
T ss_pred -----------------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh--------------
Confidence 2347999999999999888755 489999999999876521
Q ss_pred hhHHHHHHHHh-cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccH
Q 016370 235 RVLACFSNNLL-RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTV 298 (390)
Q Consensus 235 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~ 298 (390)
..++.... ................+++++|+|++++.++.... ...|+.|++.+| ...++
T Consensus 188 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG-~~~~~ 249 (256)
T 2d1y_A 188 ---LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG-MTASF 249 (256)
T ss_dssp ---HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGGBC
T ss_pred ---hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC-ccccc
Confidence 11100000 00000001112233468899999999999987642 246789999997 55443
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=182.96 Aligned_cols=222 Identities=14% Similarity=0.139 Sum_probs=159.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCCh----hHHHHhhc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHD----SRLEGLIK 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~----~~~~~~~~ 88 (390)
.|++|+||||||+|+||+++++.|+++ |++|++++| +++....+...........+.++.+|++|. +++.++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 467789999999999999999999999 999999999 655444332211100024688999999999 88887776
Q ss_pred -------cccEEEEeccccCCcccc---------------CChhHHHHHhhhhHHHHHHHHHhC---C-------CcEEE
Q 016370 89 -------MADLTINLAAICTPADYN---------------TRPLDTIYSNFIDALPVVKYCSEN---N-------KRLIH 136 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~~~---------------~~~~~~~~~nv~~~~~l~~~~~~~---~-------~~~v~ 136 (390)
++|+|||+||........ .+....+++|+.++.++++++... + .++|+
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~ 166 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN 166 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence 589999999976432211 233467889999999999988763 1 58999
Q ss_pred eecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecc
Q 016370 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPF 213 (390)
Q Consensus 137 ~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~ 213 (390)
+||...+.... +...|+.+|...+.+.+.++.+. |+++++++|+
T Consensus 167 isS~~~~~~~~---------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG 213 (276)
T 1mxh_A 167 LCDAMTDLPLP---------------------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPG 213 (276)
T ss_dssp ECCGGGGSCCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred ECchhhcCCCC---------------------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence 99987664321 23479999999999998887654 8999999999
Q ss_pred eecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 214 NWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 214 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+++| .. +...+........|. .+++.+++|+|++++.++.... ...|+.+++.+|
T Consensus 214 ~v~t~-~~--------------~~~~~~~~~~~~~p~--------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 270 (276)
T 1mxh_A 214 LSLLP-PA--------------MPQETQEEYRRKVPL--------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270 (276)
T ss_dssp SBSCC-SS--------------SCHHHHHHHHTTCTT--------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cccCC-cc--------------CCHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence 99998 32 001122222222221 1237889999999999987532 235789999986
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=181.94 Aligned_cols=231 Identities=13% Similarity=0.163 Sum_probs=162.9
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-------------ChhhhccccccccCCCCCeeEEeCCCCC
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-------------NDKIKHLLEPESQTGADRIQFHRLNIKH 79 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-------------~~~~~~~~~~~~~~~~~~i~~~~~D~~d 79 (390)
..+++|++|||||+|+||++++++|+++ |++|++++|. ......+.... ......+.++.+|++|
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAE-GADIIACDICAPVSASVTYAPASPEDLDETARLV-EDQGRKALTRVLDVRD 88 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHH-HTTTCCEEEEECCTTC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeccccccccccccccCHHHHHHHHHHH-HhcCCeEEEEEcCCCC
Confidence 3578899999999999999999999999 9999999983 22222221111 1124578899999999
Q ss_pred hhHHHHhhc-------cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----C--CCcEEEeecccc
Q 016370 80 DSRLEGLIK-------MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEV 142 (390)
Q Consensus 80 ~~~~~~~~~-------~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~--~~~~v~~Ss~~v 142 (390)
.++++++++ ++|+|||+||....... .++....+++|+.++.++++++.. . +.++|++||...
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG 168 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence 999988876 58999999998754322 233445777999999999887732 2 368999999776
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 143 y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
+.... ....|+.+|...+.+.+.++.+ +|+++.+++|+.+++|.
T Consensus 169 ~~~~~---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 215 (280)
T 3pgx_A 169 LKATP---------------------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215 (280)
T ss_dssp TSCCT---------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred ccCCC---------------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcc
Confidence 53321 2347999999999999888765 68999999999999986
Q ss_pred CCCCCCCCCCCCCchhhHHHHHHH-HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 220 MDFIPGIDGPSEGVPRVLACFSNN-LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. .......+.. ......+... ..... .+++++|+|++++.++.... ...|+++++.+|
T Consensus 216 ~~------------~~~~~~~~~~~~~~~~~~~~~-~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 276 (280)
T 3pgx_A 216 IE------------PEAMMEIFARHPSFVHSFPPM-PVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276 (280)
T ss_dssp CC------------HHHHHHHHHHCGGGGGGSCCB-TTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred cc------------hhhhhhhhhcCchhhhhhhhc-ccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 43 1111111111 1111111111 11222 38999999999999986542 246899999986
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=183.89 Aligned_cols=236 Identities=13% Similarity=0.126 Sum_probs=166.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC------------hhhhccccccccCCCCCeeEEeCCCCCh
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN------------DKIKHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~------------~~~~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
.++.+|+||||||+|+||.++++.|+++ |++|++++|+. ........... ....++.++.+|++|.
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDLCDQIASVPYPLATPEELAATVKLVE-DIGSRIVARQADVRDR 86 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HHTCCEEEEECCTTCH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecccccccccccccchHHHHHHHHHHH-hcCCeEEEEeCCCCCH
Confidence 3578899999999999999999999999 99999999872 22211111000 0135789999999999
Q ss_pred hHHHHhhc-------cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHh----C--CCcEEEeeccccccccc
Q 016370 81 SRLEGLIK-------MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEVYGKTI 147 (390)
Q Consensus 81 ~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~~~ 147 (390)
+++.++++ ++|+|||+||........++....+++|+.++.++++++.. . +.++|++||...+....
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 166 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG 166 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc
Confidence 99988886 58999999998754444455677889999999999987643 2 26899999976543321
Q ss_pred CCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCC
Q 016370 148 GSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIP 224 (390)
Q Consensus 148 ~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~ 224 (390)
. +. .+...|+.+|...+.+.+.++.+. |+++.+++|+.+.+|....
T Consensus 167 ~-------~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-- 215 (278)
T 3sx2_A 167 S-------AD----------------------PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN-- 215 (278)
T ss_dssp C-------SS----------------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS--
T ss_pred c-------CC----------------------CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh--
Confidence 0 00 123479999999999998887554 6999999999999986430
Q ss_pred CCCCCCCCchhhHHHHHH-HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 225 GIDGPSEGVPRVLACFSN-NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......+. ...........++... ..+++++|+|++++.++.... ...|+++++.+|
T Consensus 216 ----------~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 274 (278)
T 3sx2_A 216 ----------EFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG 274 (278)
T ss_dssp ----------HHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ----------hhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence 11112221 1111221112223333 578899999999999986532 246899999986
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=183.64 Aligned_cols=222 Identities=13% Similarity=0.141 Sum_probs=158.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+||||||+|+||+++++.|+++ |++|++++|+++....+...... ....+.++.+|++|.+++.++++
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHh-cCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 466789999999999999999999999 99999988876554432211110 13468899999999999988874
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 188 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV---------- 188 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC----------
Confidence 4899999999864321 223455678899999887777664 345 7999999986543221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|++++++||+.+.++...
T Consensus 189 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------- 232 (285)
T 2c07_A 189 -----------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD------------- 232 (285)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh-------------
Confidence 2347999999999998887655 3899999999999887543
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+...+........+ ...+++++|+|++++.++.... ...|+.|++.+|
T Consensus 233 ~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG 282 (285)
T 2c07_A 233 KISEQIKKNIISNIP---------AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282 (285)
T ss_dssp -CCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hcCHHHHHHHHhhCC---------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence 011112222222221 1237899999999999987643 236889999886
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-23 Score=188.07 Aligned_cols=236 Identities=15% Similarity=0.169 Sum_probs=163.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh------------hhhccccccccCCCCCeeEEeCCCCChh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND------------KIKHLLEPESQTGADRIQFHRLNIKHDS 81 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~------------~~~~~~~~~~~~~~~~i~~~~~D~~d~~ 81 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|++. ......... .....++.++.+|++|.+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~ 84 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEA-GADIAICDRCENSDVVGYPLATADDLAETVALV-EKTGRRCISAKVDVKDRA 84 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH-HHTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCccccccccccccHHHHHHHHHHH-HhcCCeEEEEeCCCCCHH
Confidence 567899999999999999999999999 999999999732 111111100 012357899999999999
Q ss_pred HHHHhhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeeccccccc
Q 016370 82 RLEGLIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGK 145 (390)
Q Consensus 82 ~~~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~ 145 (390)
++.++++ ++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+..
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence 9888876 5899999999875322 22344567789999999999875 3344 79999999876533
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCC
Q 016370 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDF 222 (390)
Q Consensus 146 ~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~ 222 (390)
.. +...|+.+|...+.+.+.++.+ +|+++.+++|+.+++|....
T Consensus 165 ~~---------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 211 (281)
T 3s55_A 165 NF---------------------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN 211 (281)
T ss_dssp CT---------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred CC---------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence 21 3347999999999999988765 48999999999999986531
Q ss_pred CCCCCCCCCCchhhH-HHHHHHHhcCC----CeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 223 IPGIDGPSEGVPRVL-ACFSNNLLRRQ----PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 223 ~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
... ..+........ ...+.........+.+++|+|++++.++.... ...|+++++.+| ...
T Consensus 212 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG-~~~ 278 (281)
T 3s55_A 212 ------------DFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG-ATA 278 (281)
T ss_dssp ------------HHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGG
T ss_pred ------------hhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC-ccc
Confidence 000 00000000000 00000011122568899999999999987643 245899999997 554
Q ss_pred c
Q 016370 297 T 297 (390)
Q Consensus 297 s 297 (390)
+
T Consensus 279 ~ 279 (281)
T 3s55_A 279 R 279 (281)
T ss_dssp G
T ss_pred C
Confidence 3
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=185.71 Aligned_cols=227 Identities=12% Similarity=0.094 Sum_probs=160.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc----CCCCCeeEEeCCCCChhHHHHhhc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ----TGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
..+++|+||||||+|+||++++++|+++ |++|++++|+.+........... ....++.++.+|++|.+++..+++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 4577899999999999999999999999 99999999987654332211100 013578999999999999988876
Q ss_pred c-------ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC-----CCcEEEeecccccccccCCCCC
Q 016370 89 M-------ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN-----NKRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 ~-------~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
. +|+|||+||...... ...+....+++|+.++.++++++... +.++|++||...++..
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------ 166 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP------ 166 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT------
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCC------
Confidence 4 899999999653221 12234567889999999999987552 3789999997622110
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+. |++++++||+.++||...
T Consensus 167 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------- 210 (303)
T 1yxm_A 167 ----------------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV-------- 210 (303)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG--------
T ss_pred ----------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhh--------
Confidence 22379999999999988877654 899999999999998421
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.........+........ ....+.+++|+|++++.++.... ...|+.+++.+|
T Consensus 211 -~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 211 -ENYGSWGQSFFEGSFQKI---------PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp -TTSGGGGGGGGTTGGGGS---------TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hhccccchHHHHHHHhcC---------cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence 000000011111111111 11237889999999999986532 246789999997
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.89 E-value=5.4e-23 Score=182.46 Aligned_cols=219 Identities=14% Similarity=0.133 Sum_probs=157.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+|+||||||+|+||++++++|+++ |++|+++ +|++.....+...... ...++.++.+|++|.++++++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~-G~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999 9999995 6765544332211100 12468889999999999988886
Q ss_pred cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|+|||+||...... ..++....+++|+.++.++++++.+ .+ .++|++||...+....
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 146 (244)
T 1edo_A 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI------------ 146 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC------------
Confidence 5899999999875321 2234456788999999999888754 34 7999999975543210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...+.+.+.++.+ .+++++++||+.++++... .+
T Consensus 147 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~~ 192 (244)
T 1edo_A 147 ---------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-------------KL 192 (244)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-------------TT
T ss_pred ---------------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh-------------hc
Confidence 2347999999999988887655 4899999999999987432 01
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~~~ 292 (390)
...+........+ ...+++++|+|+++..++..+. ...|+.|++.++
T Consensus 193 ~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 193 GEDMEKKILGTIP---------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp CHHHHHHHHTSCT---------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred ChHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 1112222222221 1247899999999999985432 235889999986
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-22 Score=176.65 Aligned_cols=220 Identities=12% Similarity=0.073 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|+... . ..++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~----~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEA-GAKVTGFDQAFTQ----E-------QYPFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCCCS----S-------CCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCchhh----h-------cCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 9999999997642 1 1137889999999999988886
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------ 140 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR------------ 140 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------------
Confidence 5899999999764321 12345567889999999998877 4444 899999998765321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|...+.+.+.++.+ .|++++++||+.++++..... ..
T Consensus 141 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~- 189 (250)
T 2fwm_X 141 ---------------------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTL---------WV- 189 (250)
T ss_dssp ---------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------
T ss_pred ---------------------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccc---------cc-
Confidence 13347999999999999888655 489999999999998854310 00
Q ss_pred hHHHHHH-HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSN-NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
-..... ...... ...........+.+.+|+|++++.++.... ...|+.+++.+|
T Consensus 190 -~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 190 -SDDAEEQRIRGFG--EQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGG 245 (250)
T ss_dssp -----------------------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -ChhHHHHHHhhhh--hcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 000000 000000 000001112247889999999999987642 246889999986
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=178.71 Aligned_cols=219 Identities=12% Similarity=0.098 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|+||||||+|+||+++++.|+++ |++|++++|+++....+.... ...+.++.+|++|.+++.++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999999876554433211 2368889999999999988876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHH----HHHHHhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPV----VKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l----~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++..+ +..+++.+ .++|++||...+....
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 146 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA---------- 146 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC----------
Confidence 5999999999764321 1234456788999998744 45555555 8999999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|++++++||+.++++...
T Consensus 147 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------------- 190 (254)
T 1hdc_A 147 -----------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA------------- 190 (254)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------------
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-------------
Confidence 2347999999999999887655 4899999999999886321
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeee-eHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFI-YIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+.... ... +. .......+. +.+|+|++++.++.... ...|+.+++.++
T Consensus 191 ----~~~~~~--~~~--~~-~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 241 (254)
T 1hdc_A 191 ----ETGIRQ--GEG--NY-PNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp ----HHTCCC--STT--SC-TTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----ccchhH--HHH--HH-hcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence 110000 000 00 111122367 89999999999987542 246889999986
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=178.70 Aligned_cols=220 Identities=18% Similarity=0.182 Sum_probs=157.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+.+. ....... ....++.++.+|++|.+++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~-~~~~~l~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARA-GANIVLNGFGDPA-PALAEIA--RHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHHH--TTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchH-HHHHHHH--hcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 9999999997651 1111100 013468889999999999998887
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.+++++ +++.+ .++|++||...+....
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 146 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST----------- 146 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC-----------
Confidence 6999999999764322 1233456788999977666554 45666 8999999987654321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+++|... .
T Consensus 147 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~ 191 (255)
T 2q2v_A 147 ----------------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ-------------K 191 (255)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH-------------H
T ss_pred ----------------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh-------------h
Confidence 2347999999999999888765 4799999999999887422 1
Q ss_pred hH---HHH---H----HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VL---ACF---S----NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~---~~~---~----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ... . ..+. ........+++++|+|++++.++.... ...|+.|++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 251 (255)
T 2q2v_A 192 QIDDRAANGGDPLQAQHDLL--------AEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251 (255)
T ss_dssp HHHHHHHHTCCHHHHHHHHH--------TTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hcccccccccchHHHHHHHH--------hccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence 11 000 0 1110 111223458999999999999887542 235889999986
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-22 Score=177.69 Aligned_cols=209 Identities=14% Similarity=0.098 Sum_probs=149.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
|++|+||||||+|+||++++++|+++ | ++|++++|+......+... ...++.++.+|++|.+.+.++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~-g~~~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhc-CCCcEEEEEecCHHHHHHHHhc----cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 8 9999999987665544322 13578999999999999888887
Q ss_pred -----cccEEEEeccccC-Cc----cccCChhHHHHHhhhhHHHHHHHHHhC----------------CCcEEEeecccc
Q 016370 89 -----MADLTINLAAICT-PA----DYNTRPLDTIYSNFIDALPVVKYCSEN----------------NKRLIHFSTCEV 142 (390)
Q Consensus 89 -----~~d~Vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----------------~~~~v~~Ss~~v 142 (390)
++|+|||+||... .. ....+....+++|+.++.++++++... ..++|++||...
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 7999999999865 21 122345567889999999988876432 468999999866
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCC
Q 016370 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPR 219 (390)
Q Consensus 143 y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~ 219 (390)
+..... ... ...+...|+.+|...+.+.+.++.+. +++++++||+.+.++.
T Consensus 156 ~~~~~~----~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (250)
T 1yo6_A 156 SITDNT----SGS----------------------AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp CSTTCC----STT----------------------SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred ccCCcc----ccc----------------------ccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence 543210 000 00244589999999999998887665 8999999999987763
Q ss_pred CCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecC
Q 016370 220 MDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGN 291 (390)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~ 291 (390)
.. . ..+++.+|+|+.++.++..... ..++.+.+.+
T Consensus 210 ~~-------------~------------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g 245 (250)
T 1yo6_A 210 GG-------------K------------------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp ----------------------------------------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred CC-------------C------------------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence 21 0 1357899999999999987642 2455555544
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-22 Score=177.75 Aligned_cols=217 Identities=12% Similarity=0.119 Sum_probs=155.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|+.......... .++.++.+|++|.+++.++++
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQ------AGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHH------HTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHh------cCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 56689999999999999999999999 99999999987654322211 257899999999998888876
Q ss_pred -cccEEEEeccccCCcccc---CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||........ ++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------ 165 (260)
T 3gem_A 98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS------------ 165 (260)
T ss_dssp SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS------------
T ss_pred CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC------------
Confidence 489999999977543222 2234578899999999988774 334 7999999976653321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+...|+.+|...+.+.+.++.+. ++++.+++|+.+..+... .
T Consensus 166 ---------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~---------------~ 209 (260)
T 3gem_A 166 ---------------------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD---------------D 209 (260)
T ss_dssp ---------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------
T ss_pred ---------------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC---------------C
Confidence 33479999999999999887665 499999999999876422 0
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCccc
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s 297 (390)
..+........++ .-+..++|+|++++.+++.. ...|++++|.+| ..++
T Consensus 210 ~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~~~~-~itG~~i~vdGG-~~~~ 258 (260)
T 3gem_A 210 AAYRANALAKSAL---------GIEPGAEVIYQSLRYLLDST-YVTGTTLTVNGG-RHVK 258 (260)
T ss_dssp ----------CCS---------CCCCCTHHHHHHHHHHHHCS-SCCSCEEEESTT-TTTC
T ss_pred HHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhhCC-CCCCCEEEECCC-cccC
Confidence 1111112222221 22456899999999999653 367899999997 5543
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-22 Score=178.45 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=162.4
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
-++++|+||||||+|+||+++++.|+++ |++|++++|+.. ....+..... ....++.++.+|++|.+++.++++
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAA-GAKVAVNYASSAGAADEVVAAIA-AAGGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3467789999999999999999999999 999999988543 2222211111 123578899999999999888876
Q ss_pred ----cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 173 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP-------- 173 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC--------
Confidence 5899999999875322 123445678899999999988763 334 7999999976543321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+ .|+++.+++||.+.++...
T Consensus 174 -------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----------- 217 (269)
T 4dmm_A 174 -------------------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS----------- 217 (269)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC-----------
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc-----------
Confidence 2347999999999988887764 4899999999999987543
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEecCCCCcc
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVGNPHNEV 296 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~~~~~~~ 296 (390)
.... .......| ...+...+|+|+++..++..+. ...|+++++.+| ..+
T Consensus 218 --~~~~---~~~~~~~p---------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG-~~~ 268 (269)
T 4dmm_A 218 --ELAA---EKLLEVIP---------LGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG-LVM 268 (269)
T ss_dssp --HHHH---HHHGGGCT---------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT-SCC
T ss_pred --cccH---HHHHhcCC---------CCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC-eec
Confidence 1111 22222222 2246779999999999998732 246899999987 443
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-22 Score=179.60 Aligned_cols=229 Identities=12% Similarity=0.038 Sum_probs=165.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MA 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~ 90 (390)
++++|+||||||+|+||++++++|+++ |++|++++|+........... ..++.++.+|++|.+++.++++ ++
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~~i 87 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSSVRRFADGVSGA 87 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTS----SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence 578899999999999999999999999 999999999887665544321 3578999999999999999988 47
Q ss_pred cEEEEeccccCCc--cccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccC-CCCC-CCCCCCCCccccc
Q 016370 91 DLTINLAAICTPA--DYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIG-SFLP-KDSPLRQDPAYYV 165 (390)
Q Consensus 91 d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~-~~~~-e~~~~~~~~~~~~ 165 (390)
|+|||+||...+. ...++....+++|+.++.++++++.... +++|++||...+..... .... +..+
T Consensus 88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~--------- 158 (291)
T 3rd5_A 88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRR--------- 158 (291)
T ss_dssp EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSC---------
T ss_pred CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccC---------
Confidence 9999999987532 2345567889999999999999998887 89999999877654321 0000 0011
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---C--ccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---G--LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
..+...|+.+|.+.+.+.+.++.+. + +++.+++||.+..+.... ....+
T Consensus 159 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~-------------~~~~~ 212 (291)
T 3rd5_A 159 -------------YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA-------------SGRKL 212 (291)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------
T ss_pred -------------CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc-------------cchHH
Confidence 1244579999999999998887654 4 999999999998775431 00001
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
...+. ..+ ..+-....+|+|+.++.++..+ ...|+.+++.+|
T Consensus 213 ~~~~~-~~~--------~~~~~~~~~~~A~~~~~l~~~~-~~~G~~~~vdgG 254 (291)
T 3rd5_A 213 GDALM-SAA--------TRVVATDADFGARQTLYAASQD-LPGDSFVGPRFG 254 (291)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHSC-CCTTCEEEETTS
T ss_pred HHHHH-HHH--------HHHHhCCHHHHHHHHHHHHcCC-CCCCceeCCccc
Confidence 11100 001 1122335999999999999985 467888888764
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-22 Score=176.95 Aligned_cols=221 Identities=14% Similarity=0.110 Sum_probs=163.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+++|++|||||+|+||++++++|+++ |++|++++|+......+...... ...++.++.+|++|.++++++++.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKE-KGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 99999999987655443322111 135789999999999998887763
Q ss_pred --ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 149 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP----------- 149 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------
Confidence 799999999875422 2234556788999999999887643 33 6999999976553321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+.+.|+.+|...+.+.+.++.+ .++++.+++|+.+..+....
T Consensus 150 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------------- 194 (247)
T 3lyl_A 150 ----------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK------------- 194 (247)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT-------------
T ss_pred ----------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh-------------
Confidence 2347999999999888887654 48999999999998875431
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+........... .....+.+++|+|+++..++.... ...|+.|++.+|
T Consensus 195 ~~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 243 (247)
T 3lyl_A 195 LTDEQKSFIATK---------IPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243 (247)
T ss_dssp SCHHHHHHHHTT---------STTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence 111122222222 223457889999999999987542 246899999986
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-22 Score=178.77 Aligned_cols=228 Identities=13% Similarity=0.107 Sum_probs=158.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh------
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI------ 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~------ 87 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|+++........... ...++.++.+|++|.+++.+++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999999 99999999987654433221110 1346889999999999888877
Q ss_pred --ccccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 88 --KMADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 88 --~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.++|+|||+||....... .++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------- 166 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP--------- 166 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT---------
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC---------
Confidence 358999999998643221 22345567799999999988773 344 7999999987765321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+. |+++++++|+.+++|..... ....
T Consensus 167 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~ 216 (273)
T 1ae1_A 167 ------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA------IKKN 216 (273)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------
T ss_pred ------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhh------hhcc
Confidence 23479999999999998886554 89999999999999864310 0000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. ....+........| ...+.+.+|+|+++..++.... ...|+++++.+|
T Consensus 217 ~-~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 266 (273)
T 1ae1_A 217 P-HQKEEIDNFIVKTP---------MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG 266 (273)
T ss_dssp ---CHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-CcHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence 0 00011112221111 1236789999999999886532 246889999986
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=180.77 Aligned_cols=231 Identities=12% Similarity=0.143 Sum_probs=157.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|+++. ...+..........++.++.+|++|.+++.++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999 9999999998765 4433221100002468889999999999888876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 150 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA---------- 150 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC----------
Confidence 4899999999764321 123345678899999998888774 334 7999999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+. |+++++++|+.+.+|....
T Consensus 151 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------ 195 (260)
T 1x1t_A 151 -----------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK------------ 195 (260)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH------------
Confidence 33479999999999998876553 8999999999999875431
Q ss_pred hhHHHHHHHH--hcCCCeEEe-cCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNL--LRRQPLKLV-DGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......... ......... ........+.+++|+|++++.++.... ...|+.|++.+|
T Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 196 -QISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp --------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 000000000 000000000 000112357899999999999987532 246889999986
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-22 Score=178.72 Aligned_cols=211 Identities=14% Similarity=0.136 Sum_probs=157.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|++.. ..++.++.+|++|.+++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDE-GSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKE 71 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 9999999997643 1367889999999999888876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 141 (264)
T 2dtx_A 72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK---------- 141 (264)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC----------
Confidence 5899999999764322 2234556788999998888877643 34 7999999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC--ccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG--LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+.+ +++++++|+.+.++... .
T Consensus 142 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~-------------~ 185 (264)
T 2dtx_A 142 -----------------------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR-------------K 185 (264)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH-------------H
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh-------------h
Confidence 334799999999999998876654 89999999998765311 0
Q ss_pred hH-------H----HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VL-------A----CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+. . .......... ....+++++|+|++++.++.... ...|+.+++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (264)
T 2dtx_A 186 AAELEVGSDPMRIEKKISEWGHEH---------PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG 245 (264)
T ss_dssp HHHHHHCSCHHHHHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhcccccCchhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 10 0 1111111111 12347899999999999987532 246889999986
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=175.31 Aligned_cols=218 Identities=17% Similarity=0.199 Sum_probs=160.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MA 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~ 90 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|++.....+.. ..++.++.+|++|.++++++++ ++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~i 75 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEK------YPGIQTRVLDVTKKKQIDQFANEVERL 75 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGG------STTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHh------ccCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 467889999999999999999999999 9999999998766554431 1378899999999998887754 58
Q ss_pred cEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 91 DLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 91 d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
|+|||+||....... .++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 141 (246)
T 2ag5_A 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-------------- 141 (246)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------------
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC--------------
Confidence 999999997653221 12344577899999999988764 334 7999999976543320
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH-
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL- 237 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~- 237 (390)
.+...|+.+|...+.+.+.++.+ .|++++++||+.+++|... ..+
T Consensus 142 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~~~~ 190 (246)
T 2ag5_A 142 ------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ-------------ERIQ 190 (246)
T ss_dssp ------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH-------------HHHH
T ss_pred ------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchh-------------hhhh
Confidence 02347999999999999888765 4899999999999987422 001
Q ss_pred -----HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 -----ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 -----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........+ ...+...+|+|++++.++.... ...|+.+++.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 191 ARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242 (246)
T ss_dssp HSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred cccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 111122222211 1237889999999999986532 246889999886
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=179.49 Aligned_cols=232 Identities=9% Similarity=0.034 Sum_probs=158.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+++....+....... ...++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARN-GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999999 999999999876544332211100 01268899999999999988886
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 152 (260)
T 2z1n_A 84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ----------- 152 (260)
T ss_dssp TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC-----------
Confidence 4999999999764321 12244567889999986666554 3445 8999999987764321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+. |+++++++|+.+++|....... .......
T Consensus 153 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~ 207 (260)
T 2z1n_A 153 ----------------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAE---ERARRSG 207 (260)
T ss_dssp ----------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------
T ss_pred ----------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhh---hhhcccC
Confidence 23479999999999988876554 8999999999999885430000 0000000
Q ss_pred hHHHH-HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACF-SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..... ...+. .......+.+++|+|++++.++.... ...|+.+++.+|
T Consensus 208 ~~~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG 257 (260)
T 2z1n_A 208 ITVEEALKSMA---------SRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257 (260)
T ss_dssp ---------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CcHHHHHHHHH---------hcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 00000 00000 11112347799999999999987532 246889999886
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-22 Score=182.09 Aligned_cols=223 Identities=14% Similarity=0.054 Sum_probs=159.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++|+||||||+|+||++++++|+++ |++|++++|+......+...... ...++.++.+|++|.+++.++++.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQA-GADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHH-TCEEEEEESSSCCHHHHHHHHHH-HCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 367789999999999999999999999 99999999987544332211100 124688999999999999888764
Q ss_pred ---ccEEEEeccccCC-cc-----ccCChhHHHHHhhhh----HHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 90 ---ADLTINLAAICTP-AD-----YNTRPLDTIYSNFID----ALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 ---~d~Vih~a~~~~~-~~-----~~~~~~~~~~~nv~~----~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|+|||+||.... .. ..++....+++|+.+ ++.+++.+++.+ .++|++||...+....
T Consensus 109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 180 (279)
T 3ctm_A 109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI-------- 180 (279)
T ss_dssp HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----------
T ss_pred hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC--------
Confidence 8999999997643 11 122344577899999 567777777766 8999999976543210
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
. .+...|+.+|...|.+++.++.+. + ++++++|+.+.++.... .
T Consensus 181 -~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~---------~ 227 (279)
T 3ctm_A 181 -P----------------------QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF---------A 227 (279)
T ss_dssp ------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS---------C
T ss_pred -C----------------------CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc---------c
Confidence 0 133479999999999999887663 6 89999999998875431 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... ........+ ...+++++|+|+++..++.... ...|+.+++.+|
T Consensus 228 ~~~~----~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG 275 (279)
T 3ctm_A 228 SKDM----KAKWWQLTP---------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG 275 (279)
T ss_dssp CHHH----HHHHHHHST---------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ChHH----HHHHHHhCC---------ccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 0111 111111111 1237889999999999987532 246889999986
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-22 Score=177.08 Aligned_cols=225 Identities=10% Similarity=0.021 Sum_probs=161.0
Q ss_pred CCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
+++|+||||||+ |+||+++++.|.++ |++|++++|++.....+...... .....++.+|++|.+++.++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHHh--cCCcEEEEccCCCHHHHHHHHHHHHH
Confidence 567899999999 99999999999999 99999999986211111111000 1234789999999999888876
Q ss_pred ---cccEEEEeccccCC----c-----cccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ---MADLTINLAAICTP----A-----DYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~----~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||.... . ...++....+++|+.++.++++++...- .++|++||...+....
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 157 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------ 157 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC------
Confidence 48999999997642 1 1223455688899999999999987652 5999999976653211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
+...|+.+|...+.+.+.++.+. |+++++++|+.+++|....
T Consensus 158 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------- 202 (265)
T 1qsg_A 158 ---------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-------- 202 (265)
T ss_dssp ---------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG--------
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc--------
Confidence 23379999999999998887664 8999999999999986431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
. .....+........|+ ..+.+++|+|++++.++.... ...|+.|++.++ ...
T Consensus 203 --~-~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG-~~~ 256 (265)
T 1qsg_A 203 --I-KDFRKMLAHCEAVTPI---------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG-FSI 256 (265)
T ss_dssp --S-TTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT-GGG
T ss_pred --c-cccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC-cCC
Confidence 0 0112222222222222 136789999999999986532 235789999996 443
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=181.23 Aligned_cols=247 Identities=13% Similarity=0.126 Sum_probs=167.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC------------hhhhccccccccCCCCCeeEEeCCCCChh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN------------DKIKHLLEPESQTGADRIQFHRLNIKHDS 81 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~------------~~~~~~~~~~~~~~~~~i~~~~~D~~d~~ 81 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|.. .......... .....++.++.+|++|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDICHDIETNEYPLATSRDLEEAGLEV-EKTGRKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHH-HHTTSCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEcccccccccccchhhhHHHHHHHHHH-HhcCCceEEEEccCCCHH
Confidence 467899999999999999999999999 99999999872 1111111100 012357899999999999
Q ss_pred HHHHhhc-------cccEEEEeccccCCc--cccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCC
Q 016370 82 RLEGLIK-------MADLTINLAAICTPA--DYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 82 ~~~~~~~-------~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~ 149 (390)
++.++++ ++|+|||+||..... ...++....+++|+.++.++++++...- .++|++||...+......
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 164 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP 164 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence 9888776 589999999987543 2234556788999999999999887652 699999998766544322
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
+..+..+. .+...|+.+|...+.+.+.++.+. |+++.+++||.+..+....
T Consensus 165 ~~~~~~~~----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---- 218 (287)
T 3pxx_A 165 PGAGGPQG----------------------PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS---- 218 (287)
T ss_dssp C-----CH----------------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS----
T ss_pred ccccccCC----------------------CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc----
Confidence 22221111 134579999999999998887665 8999999999999886431
Q ss_pred CCCCCCchhhHHHHHHHHhcCCC----eEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQP----LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
......+......... ............+.+++|+|++++.++.... ...|++++|.+| ...
T Consensus 219 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG-~~~ 285 (287)
T 3pxx_A 219 -------APMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG-AML 285 (287)
T ss_dssp -------HHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGG
T ss_pred -------cchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch-hhh
Confidence 0000000000000000 0000001111468899999999999986532 246899999997 443
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-22 Score=177.25 Aligned_cols=223 Identities=15% Similarity=0.159 Sum_probs=158.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++|+||||||+|+||++++++|+++ |++|++++|+.+....+.... ..++.++.+|++|.+++.++++.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999999876554432211 24688999999999988887764
Q ss_pred ---ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCCCcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||...... ..++....+++|+.++..+.+++ ++.+.++|++||...+....
T Consensus 78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 146 (253)
T 1hxh_A 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE----------- 146 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT-----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCC-----------
Confidence 699999999864321 12334567789998877666544 44447999999987654321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---c--CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---N--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ . +++++++||+.+++|...... +
T Consensus 147 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~----~---- 196 (253)
T 1hxh_A 147 ----------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL----P---- 196 (253)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS----C----
T ss_pred ----------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc----c----
Confidence 3347999999999999888755 3 899999999999987422000 0
Q ss_pred hhhHHHHHHH-HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNN-LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... .. +.... .......+.+++|+|++++.++.... ...|+.+++.+|
T Consensus 197 ~~~~----~~~~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 247 (253)
T 1hxh_A 197 KGVS----KEMVLHDP------KLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp TTCC----HHHHBCBT------TTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred hhhh----HHHHhhhh------ccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence 0000 00 11100 01112347899999999999987642 246889999886
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-22 Score=179.52 Aligned_cols=226 Identities=15% Similarity=0.140 Sum_probs=162.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|.+.......... .....+.++.+|++|.+++.++.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARA-GAHVLAWGRTDGVKEVADEIA--DGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTHHHHHHHHHH--TTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 466789999999999999999999999 999999997653222111110 123578899999999988877754
Q ss_pred -cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~----------- 173 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR----------- 173 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS-----------
T ss_pred CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC-----------
Confidence 58999999998754322 2334567889999999998876 3344 7899999987653321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+.+|.... . .
T Consensus 174 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----------~-~ 220 (273)
T 3uf0_A 174 ----------------------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAA----------L-R 220 (273)
T ss_dssp ----------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH----------H-H
T ss_pred ----------------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhh----------c-c
Confidence 3347999999999999988766 58999999999999875320 0 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCcc
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEV 296 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~ 296 (390)
.............| ...+..++|+|++++.++... ....|+++++.+| ...
T Consensus 221 ~~~~~~~~~~~~~p---------~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG-~~~ 272 (273)
T 3uf0_A 221 ADDERAAEITARIP---------AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG-WLA 272 (273)
T ss_dssp TSHHHHHHHHHHST---------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT-GGG
T ss_pred cCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC-ccC
Confidence 00111222222222 123677999999999988753 2246899999997 443
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=180.49 Aligned_cols=231 Identities=16% Similarity=0.078 Sum_probs=166.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+||||||+|+||+++++.|+++ |++|++++|+.+....+...... ....+.++.+|++|.+++..+++
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFARE-GAKVVVTARNGNALAELTDEIAG-GGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHTT-TTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987665443322111 23578899999999999888876
Q ss_pred --cccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||..... ...++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 153 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF--------- 153 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC---------
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC---------
Confidence 589999999976321 12234556788999999999887643 33 6999999976652110
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+. |+++.+++||.+.+|..... .
T Consensus 154 -----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---------~ 201 (280)
T 3tox_A 154 -----------------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN---------L 201 (280)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG---------S
T ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh---------c
Confidence 133479999999999999887664 89999999999998864310 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
...............+ ...+..++|+|++++.++.... ...|+++++.+| ..++
T Consensus 202 ~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG-~~~~ 256 (280)
T 3tox_A 202 PGAAPETRGFVEGLHA---------LKRIARPEEIAEAALYLASDGASFVTGAALLADGG-ASVT 256 (280)
T ss_dssp TTCCTHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGGC
T ss_pred cccCHHHHHHHhccCc---------cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC-cccc
Confidence 0001111222222222 2247789999999999987642 246899999997 4544
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=177.39 Aligned_cols=225 Identities=14% Similarity=0.134 Sum_probs=159.9
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
...+++|+||||||+|+||+++++.|+++ |++|++++|+..................+.++.+|++|.+++..+++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 34577899999999999999999999999 99999999987654433211100012467889999999998888776
Q ss_pred ----cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccc-cccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEV-YGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~v-y~~~~~~~~~e~ 154 (390)
++|+|||+||........ ++....+++|+.++.++++++ ++.+ .++|++||..+ +...
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------- 166 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-------- 166 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC--------
Confidence 589999999986432211 233457789999999988776 3445 89999999763 1110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...+.+.+.++.+ .|+++++++|+.+..+...
T Consensus 167 -------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---------- 211 (267)
T 1vl8_A 167 -------------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE---------- 211 (267)
T ss_dssp -------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH----------
T ss_pred -------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc----------
Confidence 13347999999999999887655 4899999999999876432
Q ss_pred CchhhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ...........+. ..+...+|+|++++.++.... ...|+.+++.+|
T Consensus 212 ---~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 263 (267)
T 1vl8_A 212 ---AVFSDPEKLDYMLKRIPL---------GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 263 (267)
T ss_dssp ---HHHTCHHHHHHHHHTCTT---------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---ccccChHHHHHHHhhCCC---------CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence 111 1122222222211 236789999999999987532 246889999886
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=178.27 Aligned_cols=228 Identities=17% Similarity=0.194 Sum_probs=162.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||+++++.|+++ |++|++++|+.+....+... ...++.++.+|++|.++++++++
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANE----IGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----HCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999987665544332 13578899999999999888876
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||........ ++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 99 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 168 (277)
T 4dqx_A 99 WGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA---------- 168 (277)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT----------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC----------
Confidence 589999999987543222 234456779999999888776 3344 6999999987653321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+. |+++.+++||.+..+..... ... .
T Consensus 169 -----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~-~ 218 (277)
T 4dqx_A 169 -----------------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKI------FAE-A 218 (277)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH------HHT-C
T ss_pred -----------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhh------ccc-c
Confidence 33479999999999998887554 89999999999977631100 000 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
............. .....+.+++|+|++++.++.... ...|+++++.+| ...
T Consensus 219 ~~~~~~~~~~~~~---------~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG-~~~ 271 (277)
T 4dqx_A 219 KDPAKLRSDFNAR---------AVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG-SSI 271 (277)
T ss_dssp SCHHHHHHHHHTT---------STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS-SSS
T ss_pred cchhHHHHHHHhc---------CcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc-hhh
Confidence 0001111112222 223346789999999999987543 246899999997 444
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-22 Score=179.06 Aligned_cols=223 Identities=13% Similarity=0.098 Sum_probs=149.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+.+|++|||||+|+||+++++.|+++ |++|++++|+. ........... ....++.++.+|++|.+++.++++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAAS-GFDIAITGIGDAEGVAPVIAELS-GLGARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCHHHHHHHHHHHH-HTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999 99999998644 33322211111 123578999999999998888876
Q ss_pred ---cccEEEEeccccC--Ccc----ccCChhHHHHHhhhhHHHHHHHHHhC--------CCcEEEeecccccccccCCCC
Q 016370 89 ---MADLTINLAAICT--PAD----YNTRPLDTIYSNFIDALPVVKYCSEN--------NKRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 89 ---~~d~Vih~a~~~~--~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~v~~Ss~~vy~~~~~~~~ 151 (390)
++|+|||+||... ... ..++....+++|+.++.++++++... +.++|++||...+....
T Consensus 104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---- 179 (280)
T 4da9_A 104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP---- 179 (280)
T ss_dssp HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------
T ss_pred HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC----
Confidence 5899999999842 111 22344566778999999888876433 24899999976543221
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+...
T Consensus 180 -----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~------- 223 (280)
T 4da9_A 180 -----------------------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA------- 223 (280)
T ss_dssp -----------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------
T ss_pred -----------------------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh-------
Confidence 2347999999999999888765 5899999999999887543
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............ .......+..++|+|++++.++.... ...|+++++.+|
T Consensus 224 ------~~~~~~~~~~~~--------~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (280)
T 4da9_A 224 ------AVSGKYDGLIES--------GLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG 274 (280)
T ss_dssp --------------------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred ------hcchhHHHHHhh--------cCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 011111111111 01123347789999999999987653 246899999986
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=175.11 Aligned_cols=228 Identities=10% Similarity=0.057 Sum_probs=164.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.|++|++|||||+|.||++++++|.++ |++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQ-FPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCC-STTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987665544322111 23578999999999999888876
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH-----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC-----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~-----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 151 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP--------- 151 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC---------
Confidence 48999999997643221 2234567889999999998877 3443 7999999976553321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh----hcCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA----ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~----~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++. .+|+++.+++||.+.++..... .
T Consensus 152 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-------~- 199 (257)
T 3imf_A 152 ------------------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-------L- 199 (257)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-----------
T ss_pred ------------------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-------c-
Confidence 234799999999998887764 3489999999999998854300 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.....+........ ....+...+|+|++++.++.... ...|+.+++.+| ...
T Consensus 200 --~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG-~~~ 252 (257)
T 3imf_A 200 --WISEEMAKRTIQSV---------PLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG-QHL 252 (257)
T ss_dssp ------CCSHHHHTTS---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-TTS
T ss_pred --ccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC-ccc
Confidence 00000111111221 12347789999999999987543 246899999997 444
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-22 Score=177.96 Aligned_cols=228 Identities=11% Similarity=0.079 Sum_probs=156.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+......+... ....+.++.+|++|.++++++++
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGE----IGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----HCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999999 99999999988765554332 13578999999999999888876
Q ss_pred --cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhCC---------CcEEEeecccccccccCCCCC
Q 016370 89 --MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSENN---------KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
.+|+|||+||...... ..++....+++|+.++.++++++...- .++|++||...+....
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----- 155 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP----- 155 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT-----
T ss_pred cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC-----
Confidence 4899999999864211 123445678899999988888764332 3599999976543221
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+ .++++.+++|+.+.++...
T Consensus 156 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------- 199 (261)
T 3n74_A 156 ----------------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT-------- 199 (261)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------
T ss_pred ----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh--------
Confidence 2346999999999999888766 5899999999999887543
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccH
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTV 298 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~ 298 (390)
.+... .. ...............+++++|+|+++..++.... ...|+++++.+| ..++.
T Consensus 200 -----~~~~~----~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG-~~~~~ 258 (261)
T 3n74_A 200 -----TFMGE----DS-EEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG-RSIGG 258 (261)
T ss_dssp ---------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT-TTC--
T ss_pred -----hhccc----Cc-HHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC-cccCC
Confidence 01100 00 0000111122233468899999999999986432 246899999997 56553
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=174.24 Aligned_cols=206 Identities=14% Similarity=0.131 Sum_probs=151.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+||||||+|+||+++++.|.++ |++|++++|+.+....+.. ..+.++.+|++|.+++.++++
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNL-------PNTLCAQVDVTDKYTFDTAITRAEKI 84 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCC-------TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhc-------CCceEEEecCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999 9999999998776554432 478899999999998888876
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||........ ++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~---------- 154 (266)
T 3p19_A 85 YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP---------- 154 (266)
T ss_dssp HCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT----------
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC----------
Confidence 589999999987533222 233456889999999977665 3445 8999999987653321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+.++.... ...
T Consensus 155 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---------~~~ 202 (266)
T 3p19_A 155 -----------------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSH---------TTS 202 (266)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG---------CSC
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhc---------ccc
Confidence 2347999999999998887765 58999999999998875431 000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
........... . ....+++++|+|++++.++..+.
T Consensus 203 ~~~~~~~~~~~----~-------~~~r~~~pedvA~av~~l~~~~~ 237 (266)
T 3p19_A 203 QQIKDGYDAWR----V-------DMGGVLAADDVARAVLFAYQQPQ 237 (266)
T ss_dssp HHHHHHHHHHH----H-------HTTCCBCHHHHHHHHHHHHHSCT
T ss_pred hhhhHHHHhhc----c-------cccCCCCHHHHHHHHHHHHcCCC
Confidence 11111111100 0 11237889999999999999875
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=177.10 Aligned_cols=223 Identities=11% Similarity=0.042 Sum_probs=158.8
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|+||||||+ |+||+++++.|+++ |++|++++|+......+...... ...+.++.+|++|.+++.++++
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHRE-GAQLAFTYATPKLEKRVREIAKG--FGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 3667899999999 99999999999999 99999999986411111111000 1247889999999998888876
Q ss_pred ----cccEEEEeccccCC--------ccccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCC
Q 016370 89 ----MADLTINLAAICTP--------ADYNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
++|+|||+||.... ....++....+++|+.++.++++++... +.++|++||...+....
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 169 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP----- 169 (285)
T ss_dssp HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-----
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-----
Confidence 48999999997642 1122344567889999999999988654 26999999976543211
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+++|....
T Consensus 170 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------- 214 (285)
T 2p91_A 170 ----------------------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS------- 214 (285)
T ss_dssp ----------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC---------
T ss_pred ----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc-------
Confidence 2337999999999999888765 38999999999999986431
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ....+...+....|+ ..+.+++|+|++++.++.... ...|+.|++.++
T Consensus 215 ---~~-~~~~~~~~~~~~~p~---------~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg 265 (285)
T 2p91_A 215 ---IT-GFHLLMEHTTKVNPF---------GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265 (285)
T ss_dssp ---CT-THHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ---cc-chHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 00 112222222222221 125679999999999986532 235789999986
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.6e-22 Score=177.59 Aligned_cols=222 Identities=14% Similarity=0.172 Sum_probs=164.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|++++|+.+....+...... ...++.++.+|++|.+++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTD-TGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987655443322111 23578999999999999888876
Q ss_pred --cccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||..... ...++....+++|+.++.++++++... +.++|++||...+....
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 155 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA---------- 155 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT----------
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC----------
Confidence 489999999875321 112344567889999999998876432 36999999986653321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+++|...
T Consensus 156 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------------- 199 (264)
T 3ucx_A 156 -----------------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLK------------- 199 (264)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHH-------------
T ss_pred -----------------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHH-------------
Confidence 3347999999999999888765 5899999999999887432
Q ss_pred hhH-----------HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVL-----------ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+. ..+......+ .....+.+++|+|++++.++.... ...|+++++.+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 260 (264)
T 3ucx_A 200 SYFEHQAGKYGTSVEDIYNAAAAG---------SDLKRLPTEDEVASAILFMASDLASGITGQALDVNCG 260 (264)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTT---------SSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhhhhhcCCCHHHHHHHHhcc---------CCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 111 1122222222 223457789999999999887532 246899999987
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=179.31 Aligned_cols=222 Identities=13% Similarity=0.120 Sum_probs=152.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
++++||||||+|+||++++++|+++ |++|+++ .|+......+..... .....+.++.+|++|.+++.++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQ-GWRVGVNYAANREAADAVVAAIT-ESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999 9999887 555443333222111 123578999999999998888876
Q ss_pred -cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhC-------C-CcEEEeecccccccccCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSEN-------N-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~-------~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||...... ..++....+++|+.++.++++++... + .++|++||...+....
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 175 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA------- 175 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT-------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC-------
Confidence 4799999999875311 22345667889999999998877543 2 6899999976543321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.....|+.+|...+.+.+.++.+. |+++++++|+.+.++....
T Consensus 176 -------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------- 221 (272)
T 4e3z_A 176 -------------------------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS--------- 221 (272)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------
T ss_pred -------------------------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc---------
Confidence 022369999999999988877654 8999999999999875430
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............. .....+..++|+|++++.++.... ...|++|++.+|
T Consensus 222 ---~~~~~~~~~~~~~---------~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 222 ---GGLPDRAREMAPS---------VPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp ---------------C---------CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---cCChHHHHHHhhc---------CCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence 0111111111111 122346679999999999987532 246899999986
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=180.19 Aligned_cols=226 Identities=14% Similarity=0.097 Sum_probs=164.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
..+++|++|||||+|+||+++++.|.++ |++|++++|+......+...... ....+.++.+|++|.+++.++++
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQ-AGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 3577889999999999999999999999 99999999987655433221111 13467889999999998888876
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 172 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP--------- 172 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC---------
Confidence 5899999999875432 2234556788999999999987742 33 6899999976553321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+...
T Consensus 173 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~------------ 216 (270)
T 3ftp_A 173 ------------------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK------------ 216 (270)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH------------
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh------------
Confidence 2347999999999988887765 4899999999999876322
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.+............| ...+.+++|+|++++.++.... ...|+++++.+| ..+
T Consensus 217 -~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG-~~~ 269 (270)
T 3ftp_A 217 -GLPQEQQTALKTQIP---------LGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG-MFM 269 (270)
T ss_dssp -HSCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-SSC
T ss_pred -hcCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC-ccc
Confidence 111112222222222 2347789999999999886432 246899999997 444
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=181.83 Aligned_cols=227 Identities=11% Similarity=0.026 Sum_probs=162.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|+.. ....+.... .....++.++.+|++|.++++++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALI-EECGRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHH-HHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHH-HHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 467889999999999999999999999 999999988632 222211111 0123578899999999998887775
Q ss_pred ----cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ..++....+++|+.++.++++++...- .++|++||...+....
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~--------- 194 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP--------- 194 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT---------
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC---------
Confidence 4899999999764211 223445688899999999999987654 4999999987765421
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+. |+++.+++|+.++++.... ....
T Consensus 195 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-------~~~~ 243 (294)
T 3r3s_A 195 ------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS-------GGQT 243 (294)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHT-------TTSC
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccc-------cCCC
Confidence 23479999999999998887654 8999999999998864110 0000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
... ..... .......+...+|+|++++.++.... ...|++++|.+| ..+
T Consensus 244 ~~~----~~~~~---------~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG-~~l 293 (294)
T 3r3s_A 244 QDK----IPQFG---------QQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG-EHL 293 (294)
T ss_dssp GGG----STTTT---------TTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT-CCC
T ss_pred HHH----HHHHH---------hcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC-ccC
Confidence 000 00111 11223346778999999999886532 246899999997 443
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=174.19 Aligned_cols=221 Identities=16% Similarity=0.146 Sum_probs=154.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|++ +........ ...++.++.+|++|.+++.++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRN----LGRRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHH----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHh----cCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 367789999999999999999999999 99999999987 544321111 13468899999999998888764
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ..++....+++|+.++.+++++ +++.+ .++|++||...+....
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 149 (249)
T 2ew8_A 79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE--------- 149 (249)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC---------
Confidence 5899999999764321 1223456788999998877776 45555 8999999987664321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++.... ..
T Consensus 150 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~~ 196 (249)
T 2ew8_A 150 ------------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA---------SA 196 (249)
T ss_dssp ------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh---------cc
Confidence 3347999999999999888765 48999999999998874320 00
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..-......... .....+.+++|+|++++.++.... ...|+.+++.+|
T Consensus 197 ~~~~~~~~~~~~-----------~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG 245 (249)
T 2ew8_A 197 LSAMFDVLPNML-----------QAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 245 (249)
T ss_dssp ---------CTT-----------SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred ccchhhHHHHhh-----------CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence 000000000000 112247889999999999987532 246889999886
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=175.03 Aligned_cols=226 Identities=13% Similarity=0.085 Sum_probs=156.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|+++.+ ............. ....++.++.+|++|.+++.++++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIE-KLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHH-TTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999 999999844 4433322211111 123578899999999999988876
Q ss_pred ---cccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeeccccc-ccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVY-GKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy-~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++...- .++|++||...+ ...
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 152 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG---------- 152 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS----------
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC----------
Confidence 58999999987622111 12335678899999999999987764 489999998765 221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC--ccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG--LEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|...+.+.+.++.+.+ +++.++.|+.+..+...
T Consensus 153 -----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~------------- 196 (259)
T 3edm_A 153 -----------------------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHD------------- 196 (259)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------
T ss_pred -----------------------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccc-------------
Confidence 1334799999999999998876653 89999999999876433
Q ss_pred hhH-HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCccc
Q 016370 235 RVL-ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVT 297 (390)
Q Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s 297 (390)
.+. ....... ........+.+++|+|++++.++.... ...|+.|++.++ ...+
T Consensus 197 ~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg-~~~~ 251 (259)
T 3edm_A 197 TFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGG-VLFS 251 (259)
T ss_dssp ---------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBC-SSBC
T ss_pred cccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC-cCCC
Confidence 010 0111111 112233457789999999999887542 246899999997 4433
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=7e-22 Score=177.77 Aligned_cols=234 Identities=12% Similarity=0.137 Sum_probs=160.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++............ ...++.++.+|++|.+++.++++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999999876544332211000 02468899999999999988876
Q ss_pred ---cccEEEEeccccCC-cc----ccCChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTP-AD----YNTRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||.... .. ..++....+++|+.++..++++ +++.+ .++|++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 159 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------- 159 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---------
Confidence 48999999997643 11 1233456778999988766554 44555 899999997654321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...+.+.+.++.+ .|+++++++|+.++++....... ..
T Consensus 160 ------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~ 210 (267)
T 1iy8_A 160 ------------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK-----QL 210 (267)
T ss_dssp ------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHH-----HH
T ss_pred ------------------------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhcccc-----cc
Confidence 13347999999999998877654 48999999999998763210000 00
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
................| ...+.+.+|+|++++.++.... ...|+.+++.+| ...
T Consensus 211 ~~~~~~~~~~~~~~~~p---------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG-~~~ 265 (267)
T 1iy8_A 211 DPENPRKAAEEFIQVNP---------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG-QSA 265 (267)
T ss_dssp CTTCHHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT-TTT
T ss_pred ChhhhhhHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC-ccc
Confidence 00001111111221111 2247789999999999986532 246889999986 444
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.88 E-value=7e-22 Score=178.42 Aligned_cols=225 Identities=11% Similarity=0.068 Sum_probs=163.8
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
...+++|++|||||+|+||++++++|+++ |++|++++|+.+....+...... ...++.++.+|++|.++++++++
T Consensus 27 ~~~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 27 LFDLSGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAG-VGGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp GGCCTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 34577899999999999999999999999 99999999987665443322111 23578899999999999988887
Q ss_pred ----cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||........ ++....+++|+.++.++++++... +.++|++||...+....
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~------- 177 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI------- 177 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-------
Confidence 589999999987543322 233455679999999998876432 26799999976543210
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
..+.+.|+.+|...+.+.+.++.+ .++++.+++|+.+..+....
T Consensus 178 ------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--------- 224 (276)
T 3r1i_A 178 ------------------------PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP--------- 224 (276)
T ss_dssp ------------------------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG---------
T ss_pred ------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---------
Confidence 013347999999999999988766 58999999999998875431
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... .........|+ ..+...+|+|++++.++.... ...|+++++.+|
T Consensus 225 -~~~----~~~~~~~~~p~---------~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 272 (276)
T 3r1i_A 225 -LAD----YHALWEPKIPL---------GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG 272 (276)
T ss_dssp -GGG----GHHHHGGGSTT---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -chH----HHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence 111 11222222221 236678999999999987532 246899999986
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-22 Score=178.44 Aligned_cols=225 Identities=12% Similarity=0.088 Sum_probs=159.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+.+|++|||||+|+||++++++|+++ |++|++++++... ........ .....++.++.+|++|.++++++++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDA-GMAVAVSHSERNDHVSTWLMHE-RDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEECSCHHHHHHHHHHH-HTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHH-HhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 46688999999999999999999999 9999999855432 22211111 1123578999999999998888776
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||...... ...+....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 170 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF---------- 170 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC----------
Confidence 5899999999875432 2234456788999999998887643 34 7999999976553321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+..+....
T Consensus 171 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~------------ 215 (269)
T 3gk3_A 171 -----------------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA------------ 215 (269)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------
T ss_pred -----------------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh------------
Confidence 3347999999999988877655 48999999999998875431
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
....... .. .........+..++|+|+++..++.... ...|+++++.+| ..+
T Consensus 216 -~~~~~~~----~~----~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG-~~~ 268 (269)
T 3gk3_A 216 -VPQDVLE----AK----ILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG-MHM 268 (269)
T ss_dssp ------------CC----SGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT-SCC
T ss_pred -hchhHHH----HH----hhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC-EeC
Confidence 1111100 00 0011223346789999999999987643 256899999997 544
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=175.22 Aligned_cols=221 Identities=10% Similarity=0.069 Sum_probs=159.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|+||||||+|+||++++++|+++ |++|++++|+.+........... ..++.++.+|++|.+++.++++
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADTATRLSA--YGDCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHTT--SSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh--cCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999999 99999999987654433221111 1268889999999998888776
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-----CcEEEeecccccccccCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-----KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-----~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~------ 176 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG------ 176 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC------
Confidence 5899999999764321 123345678899999988877653 222 5899999987654321
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCc-hhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRW-SYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~-~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
... .|+.+|...+.+.+.++.+ .|+++++++|+.+..+...
T Consensus 177 ---------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~-------- 221 (276)
T 2b4q_A 177 ---------------------------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR-------- 221 (276)
T ss_dssp ---------------------------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH--------
T ss_pred ---------------------------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh--------
Confidence 112 6999999999999888755 4899999999999877432
Q ss_pred CCCchhhHHHHHHHHhc--CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLR--RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............ ..| ...+.+.+|+|++++.++.... ...|+++++.+|
T Consensus 222 -----~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 273 (276)
T 2b4q_A 222 -----HIANDPQALEADSASIP---------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG 273 (276)
T ss_dssp -----HHHHCHHHHHHHHHTST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -----hcchhHHHHHHhhcCCC---------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 111111111111 111 1237789999999999987542 246889999886
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-22 Score=175.85 Aligned_cols=221 Identities=14% Similarity=0.149 Sum_probs=156.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|+||||||+|+||++++++|+++ |++|++++| +++....+...... ...++.++.+|++|.+++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKK-LGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999 999999998 54443322211100 13468899999999999988876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 149 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP---------- 149 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC----------
Confidence 5999999999764321 12234567889999977666554 3445 8999999976543210
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++.... ...
T Consensus 150 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~~~ 197 (246)
T 2uvd_A 150 -----------------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV---------LDE 197 (246)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC---------CCT
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh---------cCH
Confidence 2347999999999888777544 48999999999998875431 001
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... ......| ...+++.+|+|++++.++.... ...|+.+++.+|
T Consensus 198 ~~~~----~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 243 (246)
T 2uvd_A 198 NIKA----EMLKLIP---------AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG 243 (246)
T ss_dssp THHH----HHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHH----HHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence 1111 1111211 1237899999999999986532 246889999886
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.8e-22 Score=179.16 Aligned_cols=219 Identities=14% Similarity=0.113 Sum_probs=157.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|+......+... ...++.++.+|++|.+++.++++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAAD----LGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----HCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH----hCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987665544322 13578999999999999988876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------- 168 (266)
T 3grp_A 99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP---------- 168 (266)
T ss_dssp HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----------
Confidence 5899999999875322 12345567789999966666554 4445 7999999976543211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+.++...
T Consensus 169 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~------------- 212 (266)
T 3grp_A 169 -----------------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD------------- 212 (266)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-------------
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhh-------------
Confidence 2347999999999988887755 4899999999999876432
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+.......+....| ...+.+.+|+|++++.++.... ...|+++++.+|
T Consensus 213 ~~~~~~~~~~~~~~p---------~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3grp_A 213 KLNEKQKEAIMAMIP---------MKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262 (266)
T ss_dssp TCCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 111222233333322 2346779999999999887542 246899999986
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=176.00 Aligned_cols=225 Identities=12% Similarity=0.118 Sum_probs=160.0
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
..+.++|+||||||+|+||++++++|+++ |++|++++|+..... ..+..+.+|++|.+++.++++
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRY-GAKVVSVSLDEKSDV-----------NVSDHFKIDVTNEEEVKEAVEKTT 76 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCC--CT-----------TSSEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhcc-----------CceeEEEecCCCHHHHHHHHHHHH
Confidence 34678899999999999999999999999 999999999765432 356788999999999888876
Q ss_pred ----cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||......... +....+++|+.++.++++++.. .+ .++|++||...|....
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 148 (269)
T 3vtz_A 77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-------- 148 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC--------
Confidence 5899999999875432222 2345677999999988887643 34 7999999987765431
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+. ++++.+++||.+.++........ .....
T Consensus 149 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~--~~~~~ 201 (269)
T 3vtz_A 149 -------------------------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKM--EVGED 201 (269)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHH--HHCCS
T ss_pred -------------------------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhc--ccccc
Confidence 23479999999999999888766 79999999999987632100000 00000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............... ....+.+++|+|++++.++.... ...|+++++.+|
T Consensus 202 ~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 252 (269)
T 3vtz_A 202 ENAVERKIEEWGRQH---------PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG 252 (269)
T ss_dssp TTHHHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence 000111222222211 22346789999999999987542 246899999996
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=174.39 Aligned_cols=219 Identities=16% Similarity=0.125 Sum_probs=162.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|++++|+.+....+.... ......+.+|++|.++++++++
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYL----GDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----cccceEEEEeCCCHHHHHHHHHHHHHH
Confidence 357789999999999999999999999 999999999876655443221 2357889999999999988886
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|++||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------- 150 (248)
T 3op4_A 81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA---------- 150 (248)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC----------
Confidence 5899999999875422 2234556788999999999887743 34 7999999976543221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+....
T Consensus 151 -----------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------------ 195 (248)
T 3op4_A 151 -----------------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA------------ 195 (248)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT------------
T ss_pred -----------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh------------
Confidence 3347999999999888887754 48999999999998875431
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+............| ...+.+++|+|+++..++.... ...|+++++.+|
T Consensus 196 -~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG 244 (248)
T 3op4_A 196 -LNDEQRTATLAQVP---------AGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244 (248)
T ss_dssp -SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 11111222222222 2347789999999999887542 246899999986
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=174.10 Aligned_cols=222 Identities=13% Similarity=0.079 Sum_probs=160.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
++|+||||||+|+||++++++|+++ |++|+++ +|+............ ....++.++.+|++|.+++.++++.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~-G~~vv~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN-GYNIVINYARSKKAALETAEEIE-KLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-TTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999 9999987 776654433322111 1235789999999999998888763
Q ss_pred --ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------ 148 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL------------ 148 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC------------
Confidence 6999999997643222 1234456889999999998877 3444 799999997665332
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|...+.+.+.++.+. ++++.+++|+.+..+.... ..
T Consensus 149 ---------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----------~~- 196 (258)
T 3oid_A 149 ---------------------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKH----------FP- 196 (258)
T ss_dssp ---------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGG----------CT-
T ss_pred ---------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhh----------cc-
Confidence 133479999999999999887664 7999999999998875431 00
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
....+........| ...+.+++|+|++++.++.... ...|+++++.+|
T Consensus 197 ~~~~~~~~~~~~~p---------~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG 245 (258)
T 3oid_A 197 NREDLLEDARQNTP---------AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245 (258)
T ss_dssp THHHHHHHHHHHCT---------TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 01122222222222 2247789999999999987643 356899999997
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.4e-22 Score=174.47 Aligned_cols=210 Identities=12% Similarity=0.058 Sum_probs=155.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-------eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-------KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
+|+||||||+|+||++++++|+++ |+ +|++++|+......+...... ...++.++.+|++|.+++..+++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCHHHHHHHHHHHHc-cCCeeeEEEecCCCHHHHHHHHHH
Confidence 578999999999999999999999 88 999999987654433221110 13468899999999998888876
Q ss_pred ------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCC
Q 016370 89 ------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------ 153 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR------ 153 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC------
Confidence 5999999999764321 2234556788999999999887743 34 7999999987764321
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
+.+.|+.+|...|.+.+.++. ..|++++++||+.+++|....
T Consensus 154 ---------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------- 198 (244)
T 2bd0_A 154 ---------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK-------- 198 (244)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC--------
T ss_pred ---------------------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh--------
Confidence 334799999999999877654 458999999999999986431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.. .. . ...+++++|+|++++.++..+.. ..++++...++
T Consensus 199 --~~------------~~-------~--~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~ 238 (244)
T 2bd0_A 199 --VD------------DE-------M--QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTS 238 (244)
T ss_dssp --CC------------ST-------T--GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred --cc------------cc-------c--cccCCCHHHHHHHHHHHHhCCccccchheEEeccc
Confidence 00 00 0 12578999999999999987532 23455555553
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=177.45 Aligned_cols=227 Identities=14% Similarity=0.074 Sum_probs=161.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
..+++|+||||||+|+||++++++|+++ |++|++++|+........... ..++.++.+|++|.+++.++++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999 999999999876655443321 3578899999999998888776
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+...
T Consensus 100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------- 169 (277)
T 3gvc_A 100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV---------- 169 (277)
T ss_dssp HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------
Confidence 4899999999875322 2234556788999999988887643 44 689999997654321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++|+.+++|...
T Consensus 170 -----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~------------ 214 (277)
T 3gvc_A 170 -----------------------GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ------------ 214 (277)
T ss_dssp -----------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------------
T ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHH------------
Confidence 13347999999999999877655 5899999999999886321
Q ss_pred hhhHHHHHHHHhcCCCeEEecC---CcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 234 PRVLACFSNNLLRRQPLKLVDG---GQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
..... ..+........ ......+..++|+|++++.++.... ...|+++++.+| ...
T Consensus 215 -----~~~~~-~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG-~~~ 274 (277)
T 3gvc_A 215 -----TAMAM-FDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG-TIA 274 (277)
T ss_dssp -----HHHTC-C------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-GGG
T ss_pred -----Hhhhc-chhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc-chh
Confidence 10000 00000000000 0112347789999999999987532 246899999997 443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=173.13 Aligned_cols=212 Identities=14% Similarity=0.138 Sum_probs=152.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++++|+||||||+|+||++++++|+++ |++|++++|+++... .+..+.+|++|.+++.++++
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~~ 77 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAVEE 77 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHH------------HhcCeeccCCCHHHHHHHHHHHHH
Confidence 3577899999999999999999999999 999999999764332 22247899999998888776
Q ss_pred ---cccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+||..... ...++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 148 (247)
T 1uzm_A 78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG--------- 148 (247)
T ss_dssp HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC---------
Confidence 379999999976432 1223455678899999999988774 345 7999999975442210
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++...
T Consensus 149 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------------ 192 (247)
T 1uzm_A 149 ------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR------------ 192 (247)
T ss_dssp ------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------------
T ss_pred ------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh------------
Confidence 2347999999999988887655 4899999999999765321
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+............+ ...+.+++|+|++++.++.... ...|+.+++.+|
T Consensus 193 -~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG 242 (247)
T 1uzm_A 193 -ALDERIQQGALQFIP---------AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242 (247)
T ss_dssp -HSCHHHHHHHGGGCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence 000111111111111 1237899999999999987532 246889999986
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.3e-22 Score=177.97 Aligned_cols=235 Identities=10% Similarity=0.002 Sum_probs=166.7
Q ss_pred CCCCCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 11 DGRPIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 11 ~~~~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
+....++|+||||||+ |+||++++++|.++ |++|++++|+......+...... ...+.++.+|++|.+++.++++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAE--FGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHH--cCCcEEEECCCCCHHHHHHHHH
Confidence 3446788999999999 99999999999999 99999999885433322221111 2358899999999999988886
Q ss_pred -------cccEEEEeccccCCc---------cccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCC
Q 016370 89 -------MADLTINLAAICTPA---------DYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~ 149 (390)
.+|+|||+||..... ....+....+++|+.++.++++++...- .++|++||...+....
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-- 162 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP-- 162 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC--
Confidence 479999999986431 2223455678899999999999887652 6899999976653321
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
+...|+.+|...+.+.+.++.+. |+++.+++|+.+..+....
T Consensus 163 -------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---- 207 (271)
T 3ek2_A 163 -------------------------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG---- 207 (271)
T ss_dssp -------------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC----
T ss_pred -------------------------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc----
Confidence 33479999999999998887653 8999999999998875431
Q ss_pred CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCcccHHHHH
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLA 302 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s~~~l~ 302 (390)
. .....+........++ ..+..++|+|++++.++... ....|+++++.+| ...++.+++
T Consensus 208 ------~-~~~~~~~~~~~~~~~~---------~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG-~~~~~~~~~ 267 (271)
T 3ek2_A 208 ------I-KSFGKILDFVESNSPL---------KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSG-FNAVVGGMA 267 (271)
T ss_dssp ------C-HHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTT-GGGBCCCC-
T ss_pred ------c-cchHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCC-eeeehhhhh
Confidence 1 1112233333332222 23567999999999998753 2357899999997 677665554
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=181.90 Aligned_cols=242 Identities=12% Similarity=0.097 Sum_probs=167.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCC---CeeEEeCCCCChhHHHHhhc---
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAD---RIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~i~~~~~D~~d~~~~~~~~~--- 88 (390)
+++|+||||||+|+||+++++.|+++ |++|++++|+.+........... ... ++.++.+|++|.+++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILK-AGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999999 99999999987654433221111 112 68899999999998888876
Q ss_pred ----cccEEEEeccccCCcc------ccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD------YNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||...... ..++....+++|+.++.++++++... +.++|++||...+....
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~------- 174 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH------- 174 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC-------
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCC-------
Confidence 5899999999764321 12234567889999999998877543 26999999987654320
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++..... .
T Consensus 175 -------------------------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~-------~ 222 (297)
T 1xhl_A 175 -------------------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM-------G 222 (297)
T ss_dssp -------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT-------T
T ss_pred -------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc-------c
Confidence 02347999999999998887643 589999999999988742200 0
Q ss_pred Cchh---hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCCCCcccHHHHHHHHH
Q 016370 232 GVPR---VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 232 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~~~~~s~~~l~~~i~ 306 (390)
.... -...+........ ....+...+|+|++++.++... ....|+.+++.+| ....+.+.+..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG-~~~~~~~~~~~~~ 292 (297)
T 1xhl_A 223 LPETASDKLYSFIGSRKECI---------PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG-STLVMGMQTHDLM 292 (297)
T ss_dssp CCHHHHHHHHHHHHHCTTTC---------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT-GGGCCGGGGSCHH
T ss_pred cccccccchHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCC-ccccccccccchh
Confidence 0000 0011112211111 1224788999999999998643 2246899999997 6665555444443
Q ss_pred H
Q 016370 307 E 307 (390)
Q Consensus 307 ~ 307 (390)
+
T Consensus 293 ~ 293 (297)
T 1xhl_A 293 S 293 (297)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=179.42 Aligned_cols=218 Identities=11% Similarity=0.012 Sum_probs=150.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+||||||+|+||++++++|+++ |++|++++|+.+....+...... ....+.++.+|++|.+++.++++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRG-QGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 467889999999999999999999999 99999999988765543322111 13578999999999999988876
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 176 (301)
T 3tjr_A 106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA--------- 176 (301)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT---------
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC---------
Confidence 5899999999874322 2234456788999999999988643 22 5899999976653221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+. |+++++++||.+..+...
T Consensus 177 ------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~------------ 220 (301)
T 3tjr_A 177 ------------------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS------------ 220 (301)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH------------
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc------------
Confidence 33479999999998888876553 799999999998765321
Q ss_pred hhhHHH-HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 234 PRVLAC-FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
..... .........+....+.......+++++|+|++++.+++.+
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 221 -NSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp -HHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred -ccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 00000 0000011112222233334457899999999999999975
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=181.89 Aligned_cols=232 Identities=14% Similarity=0.167 Sum_probs=158.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
+++|+||||||+|+||++++++|+++ |++|++++|+.+............ ...++.++.+|++|.+++.++++.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 999999999875543221111000 123688999999999999888764
Q ss_pred ---ccEEEEeccccCCccccCChhHHHHHhhhhHHH----HHHHHHhC----CCcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYNTRPLDTIYSNFIDALP----VVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~----l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||... ..+....+++|+.++.. ++.++++. +.++|++||...+....
T Consensus 84 ~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 148 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------- 148 (267)
T ss_dssp HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------
T ss_pred cCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC-----------
Confidence 799999999753 34566788899886554 45555443 26899999987664321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh-----hhcCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG-----AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++ ...|+++++++|+.+.++.... .
T Consensus 149 ----------------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~----------~ 196 (267)
T 2gdz_A 149 ----------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES----------I 196 (267)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG----------G
T ss_pred ----------------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc----------c
Confidence 22379999999999887642 3468999999999998763210 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHH
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~ 300 (390)
.. ......... .............+++++|+|++++.++.... ..|++|++.++ +.+++.|
T Consensus 197 ~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~-~~G~~~~v~gg-~~~~~~~ 257 (267)
T 2gdz_A 197 EK--EENMGQYIE--YKDHIKDMIKYYGILDPPLIANGLITLIEDDA-LNGAIMKITTS-KGIHFQD 257 (267)
T ss_dssp GC--HHHHGGGGG--GHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTT-CSSCEEEEETT-TEEEECC
T ss_pred cc--ccccchhhh--HHHHHHHHhccccCCCHHHHHHHHHHHhcCcC-CCCcEEEecCC-CcccccC
Confidence 00 000000000 00000000112347899999999999998754 67899999997 6766655
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=184.18 Aligned_cols=238 Identities=15% Similarity=0.166 Sum_probs=170.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC----------ChhhhccccccccCCCCCeeEEeCCCCChhHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY----------NDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~ 83 (390)
.+++|+||||||+|+||.++++.|+++ |++|++++|+ ......+...... ....+.++.+|++|.+++
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v 101 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-AGGEAVADGSNVADWDQA 101 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-TTCEEEEECCCTTSHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCcccccccccccHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHH
Confidence 467789999999999999999999999 9999999986 2222222111111 135688899999999998
Q ss_pred HHhhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC-----------CcEEEeeccc
Q 016370 84 EGLIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN-----------KRLIHFSTCE 141 (390)
Q Consensus 84 ~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-----------~~~v~~Ss~~ 141 (390)
.++++ .+|+|||+||...... ..++....+++|+.++.++++++...- .++|++||..
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~ 181 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA 181 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHH
Confidence 88876 5899999999875422 223445678899999999988774321 3899999976
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 142 vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
.+.... ....|+.+|...+.+.+.++.+ .|+++.+++|+ +..+
T Consensus 182 ~~~~~~---------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~ 227 (322)
T 3qlj_A 182 GLQGSV---------------------------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR 227 (322)
T ss_dssp HHHCBT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred HccCCC---------------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence 553321 2347999999999999888766 58999999999 6554
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc-
Q 016370 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV- 296 (390)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~- 296 (390)
... ....... ......+.++.++|+|++++.++.... ...|++|++.+| ...
T Consensus 228 ~~~---------~~~~~~~----------------~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG-~~~~ 281 (322)
T 3qlj_A 228 MTE---------TVFAEMM----------------ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG-KIRV 281 (322)
T ss_dssp CSC---------CSCCC------------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETT-EEEE
T ss_pred cch---------hhhhhhh----------------hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC-cccc
Confidence 332 0000000 011122346689999999999986532 246899999986 444
Q ss_pred ----------------cHHHHHHHHHHHhhccc
Q 016370 297 ----------------TVRQLAEMMTEVYAKVS 313 (390)
Q Consensus 297 ----------------s~~~l~~~i~~~~g~~~ 313 (390)
++.++++.+.+.++.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~ 314 (322)
T 3qlj_A 282 AEGWAHGPQIDKGARWDPAELGPVVADLLGKAR 314 (322)
T ss_dssp EECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred CCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence 77999999999998653
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-21 Score=170.52 Aligned_cols=202 Identities=11% Similarity=0.021 Sum_probs=141.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|+||||||+|+||++++++|+++ |++|++++|+++....+... ..++.++.+|++|.+++.++++ +
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAE-----LEGALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----STTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH-----hhhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999 99999999987655443321 1268899999999998887775 5
Q ss_pred ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHH----HHHhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVK----YCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~----~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+||...... ..++....+++|+.++.++++ .+++.+ .++|++||...+...
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 144 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF-------------- 144 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC--------------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC--------------
Confidence 899999999764322 123345678899999875554 445566 899999998765432
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
.+.+.|+.+|...+.+.+.++.+ .|++++++||+.+..+... . .
T Consensus 145 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~-~ 191 (234)
T 2ehd_A 145 -------------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG-------------N-T 191 (234)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------
T ss_pred -------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc-------------c-c
Confidence 13347999999999888777544 5899999999988765321 0 0
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEec
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~ 290 (390)
.. . +.++..+|+|++++.++..+.....+...+.
T Consensus 192 --------~~-~----------~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~ 225 (234)
T 2ehd_A 192 --------PG-Q----------AWKLKPEDVAQAVLFALEMPGHAMVSEIELR 225 (234)
T ss_dssp -------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred --------cc-c----------cCCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence 00 0 0157899999999999987643333334343
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-21 Score=173.39 Aligned_cols=215 Identities=17% Similarity=0.161 Sum_probs=155.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChh--hhccccccccCCCCCeeEEeCCCCCh-hHHHHhhc--
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHD-SRLEGLIK-- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~-~~~~~~~~-- 88 (390)
+++|+||||||+|+||++++++|+++ |++ |++++|+... ...+.... ...++.++.+|++|. +++.++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~-G~~~v~~~~r~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAIN---PKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHC---TTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCcEEEEEecCchHHHHHHHHHhC---CCceEEEEEEecCCChHHHHHHHHHH
Confidence 56789999999999999999999999 896 9999987632 22221110 124688999999998 77877765
Q ss_pred -----cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC--------CCcEEEeecccccccccCCCCCCCC
Q 016370 89 -----MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN--------NKRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||... ..+....+++|+.++.++++++... +.++|++||...+....
T Consensus 79 ~~~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 146 (254)
T 1sby_A 79 FDQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-------- 146 (254)
T ss_dssp HHHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT--------
T ss_pred HHhcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC--------
Confidence 5899999999753 3456788999999999999887532 24699999987764321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+ .++++++++|+.+.++.......+ ..
T Consensus 147 -------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~ 197 (254)
T 1sby_A 147 -------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW----LD 197 (254)
T ss_dssp -------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG----GG
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchh----hh
Confidence 2347999999999999888765 589999999999988743200000 00
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
....+ ...... ..+.+++|+|++++.++... ..|++|++.+|
T Consensus 198 ~~~~~----~~~~~~------------~~~~~~~dvA~~i~~~~~~~--~~G~~~~v~gG 239 (254)
T 1sby_A 198 VEPRV----AELLLS------------HPTQTSEQCGQNFVKAIEAN--KNGAIWKLDLG 239 (254)
T ss_dssp SCTTH----HHHHTT------------SCCEEHHHHHHHHHHHHHHC--CTTCEEEEETT
T ss_pred hhHHH----HHHHhc------------CCCCCHHHHHHHHHHHHHcC--CCCCEEEEeCC
Confidence 00001 111111 12347999999999998754 46889999986
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-21 Score=174.19 Aligned_cols=230 Identities=14% Similarity=0.137 Sum_probs=161.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+++....+... ..++.++.+|++|.++++++++
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQE-----LPGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH-----hcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987655443321 1357899999999999988876
Q ss_pred --cccEEEEeccccCCc-c----ccCChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-D----YNTRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||..... . ..++....+++|+.++.++++++.. .+.++|++||...+....
T Consensus 80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 149 (270)
T 1yde_A 80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA---------- 149 (270)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC----------
Confidence 589999999976421 1 1123456788999999999888753 247999999975432210
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|++++++||+.+++|...... ....
T Consensus 150 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~------~~~~ 200 (270)
T 1yde_A 150 -----------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA------ALMP 200 (270)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH------TTSS
T ss_pred -----------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh------hccc
Confidence 2237999999999999888654 5899999999999987421000 0000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHH
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~ 299 (390)
.....+ .......|+ ..+...+|+|++++.++.......|+.+++.+| ....+.
T Consensus 201 ~~~~~~-~~~~~~~p~---------~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG-~~~~~~ 254 (270)
T 1yde_A 201 DPRASI-REGMLAQPL---------GRMGQPAEVGAAAVFLASEANFCTGIELLVTGG-AELGYG 254 (270)
T ss_dssp SHHHHH-HHHHHTSTT---------SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTT-TTSCC-
T ss_pred chHHHH-HHHhhcCCC---------CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCC-eecccC
Confidence 000001 111111111 135689999999999887544457889999997 555543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-22 Score=177.49 Aligned_cols=225 Identities=13% Similarity=0.102 Sum_probs=162.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||+++++.|.++ |++|++++|+.+...............++.++.+|++|.+++.++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987665443222111113578999999999998888776
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++... +.++|++||...+....
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 166 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP--------- 166 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC---------
Confidence 58999999998754322 2234457789999999998877432 25899999987653321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+.... .
T Consensus 167 ------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----------~ 212 (266)
T 4egf_A 167 ------------------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQR----------V 212 (266)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHH----------H
T ss_pred ------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhh----------h
Confidence 3347999999999999888765 48999999999998763210 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
. .............| ...+..++|+|++++.++... ....|+++++.+|
T Consensus 213 ~-~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 4egf_A 213 W-GDEAKSAPMIARIP---------LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG 262 (266)
T ss_dssp T-CSHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-cChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence 0 00111222222222 223677999999999988753 2346899999986
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=176.69 Aligned_cols=222 Identities=12% Similarity=0.075 Sum_probs=158.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||++++++|+++ |++|++++|+.... ..+.... .....++.++.+|++|.+++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNEL-EEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHH-HHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHH-HhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999 99999999965432 2221111 1123578999999999998888876
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++. +.+ .++|++||...+...
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 173 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN---------- 173 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC----------
Confidence 58999999998754321 23455678899999988877664 334 799999997654322
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+..+...
T Consensus 174 -----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~------------ 218 (271)
T 4iin_A 174 -----------------------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA------------ 218 (271)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------
T ss_pred -----------------------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh------------
Confidence 13347999999999999888766 5899999999999876432
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+........ ........+.+.+|+|+++..++.... ...|+++++.+|
T Consensus 219 -~~~~~~~~~~---------~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG 268 (271)
T 4iin_A 219 -NLKDELKADY---------VKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG 268 (271)
T ss_dssp ----------C---------GGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hhcHHHHHHH---------HhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence 1111111111 111223457889999999999987542 246899999986
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=175.68 Aligned_cols=221 Identities=14% Similarity=0.121 Sum_probs=157.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+||||||+|+||++++++|+++ |++|++++|+...... ...+.+|++|.+.+..+++
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~------------~~~~~~Dv~~~~~~~~~~~~~~~~ 91 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAA-GARVAVADRAVAGIAA------------DLHLPGDLREAAYADGLPGAVAAG 91 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECSSCCTTSCC------------SEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHh------------hhccCcCCCCHHHHHHHHHHHHHh
Confidence 467789999999999999999999999 9999999997654331 2345799999988877665
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 92 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------- 160 (266)
T 3uxy_A 92 LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG----------- 160 (266)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----------
Confidence 58999999998754322 2334556779999999999887 4444 799999997665322
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|...+.+.+.++.+. |+++.+++|+.+.+|...... ....
T Consensus 161 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~ 212 (266)
T 3uxy_A 161 ----------------------PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF------AKRG 212 (266)
T ss_dssp ----------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH------HHTT
T ss_pred ----------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh------hccc
Confidence 133479999999999998887654 899999999999876321000 0000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.........+... .....+.+++|+|++++.++.... ...|+++++.+| ..+
T Consensus 213 ~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG-~~~ 265 (266)
T 3uxy_A 213 FDPDRAVAELGRT---------VPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG-KAV 265 (266)
T ss_dssp CCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-CCC
T ss_pred ccchHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC-EeC
Confidence 0001111222222 223457889999999999987643 246899999997 554
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=180.45 Aligned_cols=232 Identities=10% Similarity=0.041 Sum_probs=164.7
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
...+++|++|||||+|.||++++++|+++ |++|++++|+.+...............++.++.+|++|.+++.++++
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 34577899999999999999999999999 99999999987654433221111113578999999999998888776
Q ss_pred ----cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 172 (277)
T 4fc7_A 101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA-------- 172 (277)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT--------
T ss_pred HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC--------
Confidence 4899999999764321 2234556788999999999987742 22 7999999976553321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+. |+++.+++||.+.++.... .
T Consensus 173 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---------~ 218 (277)
T 4fc7_A 173 -------------------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLR---------R 218 (277)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHH---------H
T ss_pred -------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhh---------h
Confidence 23479999999999998887654 8999999999998863110 0
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCccc
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s 297 (390)
. ..............|+ ..+...+|+|++++.++... ....|+++++.+| ..++
T Consensus 219 ~-~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG-~~~~ 273 (277)
T 4fc7_A 219 L-GGPQASLSTKVTASPL---------QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG-AWLT 273 (277)
T ss_dssp H-SCCHHHHHHHHHTSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-HHHH
T ss_pred c-cCCHHHHHHHhccCCC---------CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC-cccC
Confidence 0 0001122222222222 23667999999999998753 2256899999986 4443
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=175.06 Aligned_cols=221 Identities=11% Similarity=0.085 Sum_probs=158.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+.+|+||||||+|+||++++++|+++ |++|+++.++. ............ ...++.++.+|++|.+++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAAD-GFNIGVHYHRDAAGAQETLNAIVA-NGGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 356689999999999999999999999 99997766443 333222111111 23578999999999999888876
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH-----hCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS-----ENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~-----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 172 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR-------- 172 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT--------
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC--------
Confidence 5899999999875432 223455678899999999988763 334 8999999976543321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+. |+++.+++|+.+.++....
T Consensus 173 -------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------- 217 (267)
T 4iiu_A 173 -------------------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM---------- 217 (267)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC----------
T ss_pred -------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc----------
Confidence 33479999998888887776554 8999999999999876531
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
. ...........+. ..+..++|+|+++..++... ....|+++++.+|
T Consensus 218 ~----~~~~~~~~~~~p~---------~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 218 E----ESALKEAMSMIPM---------KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp C----HHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c----HHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 1 2222333333222 23667999999999998753 2356899999886
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=176.41 Aligned_cols=229 Identities=10% Similarity=0.057 Sum_probs=161.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCC---CeeEEeCCCCChhHHHHhhc--
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAD---RIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~---~i~~~~~D~~d~~~~~~~~~-- 88 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|+.+........... ... ++.++.+|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILK-SGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHT-TTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHH-cCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 367789999999999999999999999 99999999987655433221111 112 68899999999998888776
Q ss_pred -----cccEEEEeccccCCcc--------ccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCC
Q 016370 89 -----MADLTINLAAICTPAD--------YNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~ 151 (390)
.+|+|||+||...... ..++....+++|+.++.++++++... +.++|++||...+....
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 156 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---- 156 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC----
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC----
Confidence 4899999999764321 12234567889999999998877542 26999999987653320
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.+...|+.+|...+.+.+.++.+ .|+++++++|+.+++|.....
T Consensus 157 ----------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----- 203 (280)
T 1xkq_A 157 ----------------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM----- 203 (280)
T ss_dssp ----------------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT-----
T ss_pred ----------------------------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc-----
Confidence 02347999999999999888644 589999999999998743200
Q ss_pred CCCCchh---hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCC
Q 016370 229 PSEGVPR---VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~ 292 (390)
..... -...+........ ....+.+++|+|++++.++... ....|+.+++.+|
T Consensus 204 --~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 204 --GMPDQASQKFYNFMASHKECI---------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp --TCCHHHHHHHHHHHHHCTTTC---------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred --ccccccccchHHHHHHHHcCC---------CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence 00000 0011222222111 1224789999999999988643 2246889999986
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=175.42 Aligned_cols=218 Identities=14% Similarity=0.097 Sum_probs=161.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++|++|||||+|+||++++++|.++ |++|++++|+++......... ..++.++.+|++|.+++.++++.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 999999999876655433221 24688999999999998887764
Q ss_pred ---ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||........ ++....+++|+.++.++++++... +.++|++||...++..
T Consensus 78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------- 144 (263)
T 2a4k_A 78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------------- 144 (263)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-------------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC-------------
Confidence 79999999986432211 223457789999999999988654 3699999998776211
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++.... +
T Consensus 145 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------------~ 190 (263)
T 2a4k_A 145 ---------------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-------------L 190 (263)
T ss_dssp ---------------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-------------S
T ss_pred ---------------------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-------------c
Confidence 2237999999999888877654 48999999999999875430 0
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............|. ..+.+.+|+|++++.++.... ...|+.+++.++
T Consensus 191 ~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG 238 (263)
T 2a4k_A 191 PPWAWEQEVGASPL---------GRAGRPEEVAQAALFLLSEESAYITGQALYVDGG 238 (263)
T ss_dssp CHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 01112222222221 236789999999999987532 246889999986
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=171.53 Aligned_cols=214 Identities=14% Similarity=0.144 Sum_probs=150.4
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC-ChhHHHHhhcccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIKMAD 91 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~-d~~~~~~~~~~~d 91 (390)
..+++|+||||||+|+||+++++.|+++ |++|++++|++.....+ ..+.++ +|+. +.+.+.+.+.++|
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~---------~~~~~~-~D~~~~~~~~~~~~~~iD 83 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELLKRS---------GHRYVV-CDLRKDLDLLFEKVKEVD 83 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHT---------CSEEEE-CCTTTCHHHHHHHSCCCS
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHhh---------CCeEEE-eeHHHHHHHHHHHhcCCC
Confidence 4578899999999999999999999999 99999999986433221 246667 9992 2233333334799
Q ss_pred EEEEeccccCCccc----cCChhHHHHHhhhhHHHHH----HHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 92 LTINLAAICTPADY----NTRPLDTIYSNFIDALPVV----KYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 92 ~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~----~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
+|||+||....... .++....+++|+.++.+++ ..+++.+ .++|++||...|....
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------- 148 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE--------------- 148 (249)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC---------------
Confidence 99999997643221 2234567788999976654 4455556 8999999988765321
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.++++... .....
T Consensus 149 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~~~~~ 197 (249)
T 1o5i_A 149 ------------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-------------ELLSE 197 (249)
T ss_dssp ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-------------HHSCH
T ss_pred ------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc-------------ccchh
Confidence 2347999999999998887654 5899999999999987532 01011
Q ss_pred HHH-HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 240 FSN-NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ......+ ...+.+++|+|++++.++.... ...|+.|++.++
T Consensus 198 ~~~~~~~~~~p---------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG 243 (249)
T 1o5i_A 198 EKKKQVESQIP---------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG 243 (249)
T ss_dssp HHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 111 2222211 2347899999999999887532 245889999986
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=173.14 Aligned_cols=218 Identities=13% Similarity=0.207 Sum_probs=158.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||+|+||++++++|.++ |++|++++|+........ ...+.++.+|++|.+++..+++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDA-GAQVVVLDIRGEDVVADL-------GDRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHT-------CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCchHHHHHhc-------CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999 999999999665433221 3578999999999999988876
Q ss_pred cccEEEEeccccCCc--------cccCChhHHHHHhhhhHHHHHHHHHhC------------C-CcEEEeeccccccccc
Q 016370 89 MADLTINLAAICTPA--------DYNTRPLDTIYSNFIDALPVVKYCSEN------------N-KRLIHFSTCEVYGKTI 147 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~------------~-~~~v~~Ss~~vy~~~~ 147 (390)
.+|+|||+||..... ...++....+++|+.++.++++++... + .++|++||...+....
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tl3_A 79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI 158 (257)
T ss_dssp CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence 699999999975321 122345678889999999998877542 2 5899999976653321
Q ss_pred CCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCC
Q 016370 148 GSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIP 224 (390)
Q Consensus 148 ~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~ 224 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+...
T Consensus 159 ---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--- 202 (257)
T 3tl3_A 159 ---------------------------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA--- 202 (257)
T ss_dssp ---------------------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----
T ss_pred ---------------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh---
Confidence 2247999999999988887655 4799999999999887543
Q ss_pred CCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcc
Q 016370 225 GIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296 (390)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~ 296 (390)
.+............+. ...+.+.+|+|++++.++.. ....|+++++.+| ..+
T Consensus 203 ----------~~~~~~~~~~~~~~~~--------~~r~~~p~dva~~v~~l~s~-~~itG~~i~vdGG-~~~ 254 (257)
T 3tl3_A 203 ----------SLPEEARASLGKQVPH--------PSRLGNPDEYGALAVHIIEN-PMLNGEVIRLDGA-IRM 254 (257)
T ss_dssp ------------CHHHHHHHHHTSSS--------SCSCBCHHHHHHHHHHHHHC-TTCCSCEEEESTT-C--
T ss_pred ----------hccHHHHHHHHhcCCC--------CCCccCHHHHHHHHHHHhcC-CCCCCCEEEECCC-ccC
Confidence 1111222222222221 02377899999999999987 4467899999987 443
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.3e-22 Score=178.22 Aligned_cols=225 Identities=14% Similarity=0.150 Sum_probs=164.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||++++++|+++ |++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRN-VGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987655443322111 23578899999999999988886
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+...
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~----------- 169 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR----------- 169 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-----------
Confidence 5899999999874322 2234456788999999999776643 34 699999997654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++||.+..+...
T Consensus 170 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~------------- 214 (271)
T 4ibo_A 170 ----------------------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ------------- 214 (271)
T ss_dssp ----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-------------
T ss_pred ----------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh-------------
Confidence 13347999999999999888765 5899999999999887432
Q ss_pred hhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 235 RVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 235 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.+. ..+........|. ..+..++|+|++++.++.... ...|+++++.+| ...
T Consensus 215 ~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG-~~~ 269 (271)
T 4ibo_A 215 ALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG-MLS 269 (271)
T ss_dssp HHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT-GGG
T ss_pred hcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC-eec
Confidence 111 1222222222222 235678999999999887532 246899999997 443
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=174.69 Aligned_cols=232 Identities=10% Similarity=0.085 Sum_probs=160.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||+|+||++++++|+++ |++|++++|+.+........... ....+.++.+|++|.+++.++++
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRA-AGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999 99999999987655443222111 23578999999999998888776
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh------CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE------NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~------~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|+|||+||........ ++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~--------- 170 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM--------- 170 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC---------
Confidence 489999999987543222 23445677999999999987754 33 6999999976653321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+.+|........ .....
T Consensus 171 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~ 224 (279)
T 3sju_A 171 ------------------------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREG--YARHW 224 (279)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHS--CCSSS
T ss_pred ------------------------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhh--hhhcc
Confidence 2347999999999999888765 589999999999987632100000 00000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............... ....+..++|+|++++.++.... ...|+++++.+|
T Consensus 225 ~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 275 (279)
T 3sju_A 225 GVTEQEVHERFNAKI---------PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275 (279)
T ss_dssp CCCHHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred cCChHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 000112222222222 22346789999999999887642 246899999986
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=175.57 Aligned_cols=232 Identities=13% Similarity=0.155 Sum_probs=162.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc---c
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK---M 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~---~ 89 (390)
.+++|++|||||+|+||++++++|.++ |++|++++|+.+............ ....+..+.+|+++.+.+.++++ +
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence 356789999999999999999999999 999999999876554332211111 12467889999999999988887 4
Q ss_pred ccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|++||+||......... +....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 152 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ------------- 152 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT-------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC-------------
Confidence 899999999875433222 33345789999977776554 4455 7999999987653321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+...|+.+|...+.+.+.++.+. ++++.+++||.+..+. .
T Consensus 153 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~-----------------~ 195 (267)
T 3t4x_A 153 --------------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG-----------------V 195 (267)
T ss_dssp --------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH-----------------H
T ss_pred --------------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc-----------------H
Confidence 33479999999999999887654 6899999999887652 1
Q ss_pred HHHHHHHhcCCCeEE----------ecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCccc
Q 016370 238 ACFSNNLLRRQPLKL----------VDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~----------~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s 297 (390)
..+............ .........+.+++|+|++++.++... ....|+++++.+| ...+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG-~~~s 265 (267)
T 3t4x_A 196 ETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG-LVRS 265 (267)
T ss_dssp HHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT-CSCS
T ss_pred HHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCC-cccc
Confidence 111111111100000 000112345788999999999988753 2246899999997 5544
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-21 Score=169.29 Aligned_cols=215 Identities=16% Similarity=0.132 Sum_probs=157.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+++|++|||||+|+||++++++|+++ |++|++++|+.+....+... .++.++.+|++|.+++++++++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEA------VGAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT------TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH------cCCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 99999999987665544321 1378899999999988887764
Q ss_pred --ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||....... .++....+++|+.++.++++++.. .+ .++|++||...++..
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------ 143 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------ 143 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------
Confidence 8999999997643221 123445778999999999877743 34 799999998743321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+ .|+++++++|+.+..+... . ..
T Consensus 144 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~-~~- 190 (245)
T 1uls_A 144 ----------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA---------K-VP- 190 (245)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS---------S-SC-
T ss_pred ----------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh---------h-cC-
Confidence 2237999999999888877654 4899999999999877533 0 11
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........|. ..+...+|+|++++.++.... ...|+.+++.+|
T Consensus 191 --~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 237 (245)
T 1uls_A 191 --EKVREKAIAATPL---------GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237 (245)
T ss_dssp --HHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --HHHHHHHHhhCCC---------CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 1111222222111 126789999999999987532 246889999886
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=176.37 Aligned_cols=213 Identities=17% Similarity=0.172 Sum_probs=149.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|+......+....... ....+.++.+|++|.+++..+++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 467789999999999999999999999 999999999876544332211100 11357889999999999888776
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhh----HHHHHHHHHhCC---CcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFID----ALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~----~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||....... ..+....+++|+.+ ++.++..+++.+ .++|++||...+...
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~-------- 179 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL-------- 179 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--------
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC--------
Confidence 59999999997643221 22345678899999 777777777765 699999998765321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
+. .+...|+.+|...+.+.+.++.+ .++++++++|+.+.++...
T Consensus 180 -~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~-------- 228 (279)
T 1xg5_A 180 -PL----------------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-------- 228 (279)
T ss_dssp -SC----------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH--------
T ss_pred -CC----------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh--------
Confidence 00 13347999999999888877643 4799999999999876311
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.. ....+..... ......+++++|+|++++.++..+.
T Consensus 229 ---------~~----~~~~~~~~~~-~~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 229 ---------KL----HDKDPEKAAA-TYEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp ---------HH----TTTCHHHHHH-HHC---CBCHHHHHHHHHHHHHSCT
T ss_pred ---------hh----cccChhHHhh-hcccccCCCHHHHHHHHHHHhcCCc
Confidence 00 0000000000 0012247889999999999998764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.4e-21 Score=171.39 Aligned_cols=225 Identities=9% Similarity=0.035 Sum_probs=162.6
Q ss_pred CCCCCEEEEEcCchh--HHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGF--IGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~--iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|+||||||+|+ ||++++++|+++ |++|++++|+......+.+........++.++.+|++|.++++++++
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 467889999999999 999999999999 99999999886433332222111112378999999999999888876
Q ss_pred ----cccEEEEeccccCC----c----cccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTP----A----DYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~----~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|+|||+||.... . ...++....+++|+.++.++++++...- .++|++||...+....
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 156 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP------ 156 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT------
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC------
Confidence 48999999998641 1 1122345677899999999999887653 5899999976553211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+ .|+++.+++|+.+..+....
T Consensus 157 ---------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------- 201 (266)
T 3oig_A 157 ---------------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG-------- 201 (266)
T ss_dssp ---------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT--------
T ss_pred ---------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc--------
Confidence 2347999999999998887755 37999999999998865431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. .............+. ..+...+|+|++++.++.... ...|+++++.+|
T Consensus 202 --~~-~~~~~~~~~~~~~~~---------~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG 252 (266)
T 3oig_A 202 --IS-DFNSILKDIEERAPL---------RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG 252 (266)
T ss_dssp --CT-THHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --cc-chHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence 01 112222222222221 235679999999999997632 256899999986
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=172.93 Aligned_cols=223 Identities=8% Similarity=0.027 Sum_probs=159.4
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|+||||||+ |+||+++++.|.++ |++|++++|+......+...... ...+.++.+|++|.+++.++++
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK 79 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEcCCCCHHHHHHHHHHHH
Confidence 3567899999999 99999999999999 99999999987411111111000 1247889999999998888776
Q ss_pred ----cccEEEEeccccCC--------ccccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTP--------ADYNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||.... ....++....+++|+.++.++++++... +.++|++||...+...
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------- 152 (275)
T 2pd4_A 80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM------- 152 (275)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC-------
Confidence 47999999997642 1122345567889999999999998775 3699999997654321
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
.+...|+.+|...+.+.+.++.+. |+++++++||.+.++....
T Consensus 153 --------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------- 198 (275)
T 2pd4_A 153 --------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG-------- 198 (275)
T ss_dssp --------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG--------
T ss_pred --------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh--------
Confidence 023479999999999998887654 8999999999999875431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ....+...+....|+ ..+...+|+|++++.++.... ...|+.+++.++
T Consensus 199 --~~-~~~~~~~~~~~~~p~---------~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg 249 (275)
T 2pd4_A 199 --IA-DFRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249 (275)
T ss_dssp --ST-THHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --cc-ccHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 00 111222222222221 125679999999999986532 246788999886
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-21 Score=172.73 Aligned_cols=211 Identities=14% Similarity=0.141 Sum_probs=153.6
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCC---CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETP---HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
....+++|+||||||+|+||++++++|+++ | ++|++++|+.+....+.+... ...++.++.+|++|.+.+.+++
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~-G~~~~~V~~~~r~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~ 91 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNL-PQPPQHLFTTCRNREQAKELEDLAK--NHSNIHILEIDLRNFDAYDKLV 91 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTS-SSCCSEEEEEESCTTSCHHHHHHHH--HCTTEEEEECCTTCGGGHHHHH
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhc-CCCCcEEEEEecChhhhHHHHHhhc--cCCceEEEEecCCChHHHHHHH
Confidence 334578899999999999999999999999 8 999999998764433221111 1247899999999999998888
Q ss_pred c---------cccEEEEeccccC-Cc----cccCChhHHHHHhhhhHHHHHHHHHhC----------------CCcEEEe
Q 016370 88 K---------MADLTINLAAICT-PA----DYNTRPLDTIYSNFIDALPVVKYCSEN----------------NKRLIHF 137 (390)
Q Consensus 88 ~---------~~d~Vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----------------~~~~v~~ 137 (390)
+ ++|+|||+||... .. ...++....+++|+.++.++++++... +.++|++
T Consensus 92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i 171 (267)
T 1sny_A 92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 171 (267)
T ss_dssp HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence 6 6999999999765 11 122345567889999999999887543 3689999
Q ss_pred ecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecce
Q 016370 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFN 214 (390)
Q Consensus 138 Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~ 214 (390)
||...+.... +. .+...|+.+|...|.+.+.++.+ .+++++++||+.
T Consensus 172 sS~~~~~~~~--------~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~ 221 (267)
T 1sny_A 172 SSILGSIQGN--------TD----------------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGW 221 (267)
T ss_dssp CCGGGCSTTC--------CS----------------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCS
T ss_pred ecccccccCC--------CC----------------------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcc
Confidence 9987764421 00 13347999999999999888765 589999999999
Q ss_pred ecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecC
Q 016370 215 WIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGN 291 (390)
Q Consensus 215 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~ 291 (390)
+..+... . ..++..+|+|+.++.++..... ..+..|++.+
T Consensus 222 v~t~~~~-------------~------------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g 262 (267)
T 1sny_A 222 VKTDMGG-------------S------------------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG 262 (267)
T ss_dssp BCSTTTC-------------T------------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred eecCCCC-------------C------------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence 8765321 0 0246789999999999986432 3455555544
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=178.08 Aligned_cols=222 Identities=10% Similarity=-0.002 Sum_probs=144.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+.+++||||||+|+||++++++|+++ |++|++++|+.+....+....... ....+.++.+|++|.+++.++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467789999999999999999999999 999999999886654433211110 11278899999999999888876
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC-----------CCcEEEeecccccccccCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN-----------NKRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----------~~~~v~~Ss~~vy~~~~~~~ 150 (390)
.+|+|||+||...... ..++....+++|+.|+.++++++... +.++|++||...+....
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~--- 160 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG--- 160 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS---
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC---
Confidence 3799999999764322 12345567889999999998877543 25799999987654321
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCC
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
..+.|+.+|...+.+.+.++. ..|+++++++||.|.++.....
T Consensus 161 ------------------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---- 206 (319)
T 3ioy_A 161 ------------------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD---- 206 (319)
T ss_dssp ------------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------
T ss_pred ------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc----
Confidence 224799999966666655543 3489999999999988754310
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
......+....... ....+... .......+.++|+|+.++.+++.+
T Consensus 207 ---~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 207 ---DIRPDALKGEVKPV-DKTAVERL--AGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp ----------------------------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred ---ccCchhhcccccch-hHHHHHHH--HHhhhcCCCHHHHHHHHHHHHHcC
Confidence 00000000000000 00001111 011112379999999999999985
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-21 Score=169.83 Aligned_cols=212 Identities=14% Similarity=0.127 Sum_probs=152.8
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
..+.+|+||||||+|+||+++++.|+++ |++|++++|+.+.. ..+.++.+|++|.++++++++.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~------------~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADA-GDKVAITYRSGEPP------------EGFLAVKCDITDTEQVEQAYKEIEE 83 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSCCC------------TTSEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHhh------------ccceEEEecCCCHHHHHHHHHHHHH
Confidence 4567789999999999999999999999 99999999976432 2477899999999998887764
Q ss_pred ----ccEEEEeccccCCc----cccCChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPA----DYNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|+|||+||..... ...++....+++|+.++.++++++.. .+ .++|++||...+....
T Consensus 84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------- 154 (253)
T 2nm0_A 84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA--------- 154 (253)
T ss_dssp HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC---------
Confidence 69999999976432 12345667889999999998886643 34 7999999976543210
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .++++++++|+.+..+...
T Consensus 155 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~------------ 198 (253)
T 2nm0_A 155 ------------------------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK------------ 198 (253)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------------
T ss_pred ------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh------------
Confidence 2237999999999998887655 4799999999998776432
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+............+ ...++..+|+|++++.++.... ...|+.+++.+|
T Consensus 199 -~~~~~~~~~~~~~~p---------~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG 248 (253)
T 2nm0_A 199 -VLTDEQRANIVSQVP---------LGRYARPEEIAATVRFLASDDASYITGAVIPVDGG 248 (253)
T ss_dssp ------CHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence 000001111111111 1237889999999999987642 246889999886
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=174.76 Aligned_cols=231 Identities=11% Similarity=0.046 Sum_probs=155.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHh-hCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILL-ETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.++|+||||||+|+||++++++|++ + |++|++++|+.+........... ...++.++.+|++|.+++..+++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~-g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhc-CCeEEEEeCChHHHHHHHHHHHh-cCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 3578999999999999999999999 7 99999999987554432221110 12468899999999999988887
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccC-----------
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIG----------- 148 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~----------- 148 (390)
++|+|||+||....... ..+....+++|+.++.++++++.... .++|++||...+.....
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 159 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccc
Confidence 69999999997743222 23445678899999999999998764 49999999876642100
Q ss_pred CCCCCCCCCCCCcccc-ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-------cCccEEEeecceecCCCC
Q 016370 149 SFLPKDSPLRQDPAYY-VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-------NGLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~-~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~i~G~~~ 220 (390)
..+.|+........+. ...... ......|.+.|+.+|...|.+.+.++.+ .++++++++|+.+.++..
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~ 235 (276)
T 1wma_A 160 ETITEEELVGLMNKFVEDTKKGV----HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTC----TTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred cccchhhhhhhhhhhhhhhcccc----cccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence 0111100000000000 000000 0000113468999999999998887655 589999999999987643
Q ss_pred CCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC---CCCCceEE
Q 016370 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA---RANGHIFN 288 (390)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~n 288 (390)
. . ..+++++|+|++++.++..+. ...|+.|.
T Consensus 236 ~-------------~------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 236 G-------------P------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp C-------------T------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred C-------------c------------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 2 0 126789999999999998552 23455554
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-21 Score=167.64 Aligned_cols=207 Identities=14% Similarity=0.066 Sum_probs=156.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---ccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MAD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~d 91 (390)
+++|++|||||+|+||++++++|.++ |++|++++|+.. +|++|.++++++++ ++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~g~id 61 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESE-HTIVHVASRQTG---------------------LDISDEKSVYHYFETIGAFD 61 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCST-TEEEEEESGGGT---------------------CCTTCHHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEecCCcc---------------------cCCCCHHHHHHHHHHhCCCC
Confidence 56789999999999999999999999 999999998642 89999999988886 489
Q ss_pred EEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 92 LTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 92 ~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
++||+||..... ...++....+++|+.++.++++++...- .++|++||...+....
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------- 125 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA---------------- 125 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT----------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC----------------
Confidence 999999976321 1223445678899999999999987653 5899999987654321
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC-ccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG-LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (390)
+...|+.+|...+.+.+.++.+.+ +++.+++|+.+..|... .........+..
T Consensus 126 -----------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~---------~~~~~~~~~~~~ 179 (223)
T 3uce_A 126 -----------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYK---------GMNADDRDAMYQ 179 (223)
T ss_dssp -----------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGT---------TSCHHHHHHHHH
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhh---------hcchhhHHHHHH
Confidence 334799999999999999887765 99999999999887543 111122222233
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcc
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~ 296 (390)
......| ...+.+++|+|++++.++... ...|+.+++.+| ..+
T Consensus 180 ~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~-~~tG~~i~vdgG-~~~ 222 (223)
T 3uce_A 180 RTQSHLP---------VGKVGEASDIAMAYLFAIQNS-YMTGTVIDVDGG-ALL 222 (223)
T ss_dssp HHHHHST---------TCSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTT-GGG
T ss_pred HHhhcCC---------CCCccCHHHHHHHHHHHccCC-CCCCcEEEecCC-eec
Confidence 3333222 224678999999999999863 357899999997 443
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-21 Score=168.22 Aligned_cols=212 Identities=13% Similarity=0.111 Sum_probs=154.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|++|||||+|+||++++++|+++ |++|++++|+++.... . . ++.++.+|++| +++.++++ +
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~--~-----~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR-GYRVAIASRNPEEAAQ--S-----L--GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHH--H-----H--TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHH--h-----h--CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 478999999999999999999999 9999999998765211 1 0 37788999999 76666554 5
Q ss_pred ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+||...... ..++....+++|+.++.++++++. +.+ .++|++||...+.... +
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------~---- 138 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------P---- 138 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------T----
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--------C----
Confidence 999999999764321 123455678899999988888773 444 7999999987765421 0
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
.+...|+.+|...+.+.+.++.+. |++++++||+.+.++... ...
T Consensus 139 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------------~~~ 186 (239)
T 2ekp_A 139 -------------------VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL-------------PLR 186 (239)
T ss_dssp -------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-------------HHH
T ss_pred -------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh-------------ccc
Confidence 133479999999999998887654 899999999999887432 110
Q ss_pred --HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 --ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 --~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..+........| ...+...+|+|++++.++.... ...|+.+++.+|
T Consensus 187 ~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 235 (239)
T 2ekp_A 187 QNPELYEPITARIP---------MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235 (239)
T ss_dssp TCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence 112222222211 1237789999999999986532 246889999886
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-21 Score=174.56 Aligned_cols=223 Identities=15% Similarity=0.187 Sum_probs=163.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|.||++++++|+++ |++|++++|+.+....+.... ..++.++.+|++|.+++.++++
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSVLAAIEAANQL 101 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 467789999999999999999999999 999999999877655443321 3578999999999999988876
Q ss_pred -cccEEEEe-ccccCCcc---------ccCChhHHHHHhhhhHHHHHHHHHh----------CC-CcEEEeecccccccc
Q 016370 89 -MADLTINL-AAICTPAD---------YNTRPLDTIYSNFIDALPVVKYCSE----------NN-KRLIHFSTCEVYGKT 146 (390)
Q Consensus 89 -~~d~Vih~-a~~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~----------~~-~~~v~~Ss~~vy~~~ 146 (390)
++|+|||+ |+...... ..++....+++|+.++.++++++.. .+ .++|++||...+...
T Consensus 102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 181 (281)
T 3ppi_A 102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ 181 (281)
T ss_dssp SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC
T ss_pred CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC
Confidence 48999999 44432211 1122467888999999999887752 22 589999998765332
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCC
Q 016370 147 IGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFI 223 (390)
Q Consensus 147 ~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~ 223 (390)
. +...|+.+|...+.+.+.++.+. |+++.+++|+.+..+...
T Consensus 182 ~---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-- 226 (281)
T 3ppi_A 182 I---------------------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME-- 226 (281)
T ss_dssp T---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--
T ss_pred C---------------------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh--
Confidence 1 23479999999998888776554 799999999999765322
Q ss_pred CCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCccc
Q 016370 224 PGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT 297 (390)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s 297 (390)
.+............+. ...+++++|+|++++.++... ...|+++++.+| ..++
T Consensus 227 -----------~~~~~~~~~~~~~~~~--------~~~~~~pedvA~~v~~l~s~~-~~tG~~i~vdGG-~~~~ 279 (281)
T 3ppi_A 227 -----------SVGEEALAKFAANIPF--------PKRLGTPDEFADAAAFLLTNG-YINGEVMRLDGA-QRFT 279 (281)
T ss_dssp -----------TTCHHHHHHHHHTCCS--------SSSCBCHHHHHHHHHHHHHCS-SCCSCEEEESTT-CCCC
T ss_pred -----------cccHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHHcCC-CcCCcEEEECCC-cccC
Confidence 1112222233333221 134788999999999999874 467899999997 5543
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=175.30 Aligned_cols=223 Identities=15% Similarity=0.131 Sum_probs=156.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
...++|+||||||+|+||++++++|+++ |++|+++++ ............. ....++.++.+|++|.+++.++++
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKD-GFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHT-TEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence 3457789999999999999999999999 999999884 3333222111110 123578899999999998888876
Q ss_pred ----cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 158 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF-------- 158 (256)
T ss_dssp HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS--------
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC--------
Confidence 4899999999875322 12344567889999988876665 4445 7899999976543321
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+..+...
T Consensus 159 -------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----------- 202 (256)
T 3ezl_A 159 -------------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK----------- 202 (256)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------
T ss_pred -------------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc-----------
Confidence 3347999999999988887755 5899999999999876432
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.........+....+. ..+...+|+|+++..++... ....|+++++.+|
T Consensus 203 --~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (256)
T 3ezl_A 203 --AIRPDVLEKIVATIPV---------RRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252 (256)
T ss_dssp --TSCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --ccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 1112222333222221 23667999999999988643 2246899999986
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-21 Score=169.80 Aligned_cols=219 Identities=13% Similarity=0.094 Sum_probs=157.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+|++|||||+|+||++++++|+++ |++|++++|+... ...+...... ...++.++.+|++|.+++.++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD-GFDIAVADLPQQEEQAAETIKLIEA-ADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECGGGHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999 9999999998765 3332211111 13468899999999998888776
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh-----CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE-----NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~-----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .. .++|++||...+....
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 149 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP---------- 149 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC----------
Confidence 5899999999764321 1234456788999999999887754 23 6999999986653211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
+...|+.+|...+.+.+.++.+ .++++.+++|+.+..+...
T Consensus 150 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------------- 193 (258)
T 3a28_C 150 -----------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE------------- 193 (258)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH-------------
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh-------------
Confidence 2347999999999999887654 4899999999998765311
Q ss_pred hhHH-----------HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLA-----------CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.... .......... ....+.+.+|+|++++.++.... ...|+.+++.+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 254 (258)
T 3a28_C 194 QIDAELSKINGKPIGENFKEYSSSI---------ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG 254 (258)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred hhhhhhccccCCchHHHHHHHHhcC---------CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence 0010 0111111111 12237889999999999987542 246889999986
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-20 Score=172.53 Aligned_cols=223 Identities=8% Similarity=0.002 Sum_probs=162.7
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++|||||+| .||+++++.|+++ |++|++++|+......+...... ...+.++.+|++|.++++++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAES--LGVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHH--HTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHh--cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 46788999999998 9999999999999 99999999986543322211111 1346889999999999988886
Q ss_pred ----cccEEEEeccccCC--------ccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTP--------ADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||.... ....++....+++|+.++.++++++...- .++|++||...+....
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~------ 177 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP------ 177 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT------
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC------
Confidence 47999999998642 12223455678899999999999887653 5899999976553221
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+. |+++.+++||.+..+....
T Consensus 178 ---------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-------- 222 (296)
T 3k31_A 178 ---------------------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG-------- 222 (296)
T ss_dssp ---------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS--------
T ss_pred ---------------------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc--------
Confidence 23479999999999998887654 8999999999999875431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. .............|+ ..+...+|+|++++.++... ....|+++++.+|
T Consensus 223 --~~-~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 273 (296)
T 3k31_A 223 --IS-DFHYILTWNKYNSPL---------RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273 (296)
T ss_dssp --CH-HHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --cc-chHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence 11 112222222222222 12567899999999998753 2356899999997
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-21 Score=172.01 Aligned_cols=219 Identities=11% Similarity=0.080 Sum_probs=155.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------M 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~ 89 (390)
+|+||||||+|+||++++++|+++ |++|++++|+++....+...... ...++.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999 99999999987654433221111 12468899999999999988886 5
Q ss_pred ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHh----C--CCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||....... .++....+++|+.++.++++++.. . +.++|++||...+....
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 147 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------------ 147 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC------------
Confidence 9999999997643211 123445788999999888776643 2 26899999976542210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+.+|... ..
T Consensus 148 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------~~ 193 (256)
T 1geg_A 148 ---------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA-------------EI 193 (256)
T ss_dssp ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH-------------HH
T ss_pred ---------------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh-------------hh
Confidence 2347999999999999887654 4899999999999876321 11
Q ss_pred HH-----------HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LA-----------CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. .......... ....+.+.+|+|++++.++.... ...|+.+++.+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 252 (256)
T 1geg_A 194 DRQVSEAAGKPLGYGTAEFAKRI---------TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252 (256)
T ss_dssp HHHHHHHHTCCTTHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred hhhccccccCChHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 00 0011111111 12247899999999999987542 246889999886
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-21 Score=174.42 Aligned_cols=239 Identities=15% Similarity=0.130 Sum_probs=161.6
Q ss_pred CCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC------------hhhhccccccccCCCCCeeEEeCCC
Q 016370 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN------------DKIKHLLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 10 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~------------~~~~~~~~~~~~~~~~~i~~~~~D~ 77 (390)
.+..++++|++|||||+|.||.++++.|.++ |++|++++|++ .......... .....++.++.+|+
T Consensus 21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv 98 (299)
T 3t7c_A 21 SMAGKVEGKVAFITGAARGQGRSHAITLARE-GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV-EALGRRIIASQVDV 98 (299)
T ss_dssp -CCCTTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHH-HHTTCCEEEEECCT
T ss_pred ccccccCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecccccccccccccCHHHHHHHHHHH-HhcCCceEEEECCC
Confidence 3344678899999999999999999999999 99999999872 2222111110 01245789999999
Q ss_pred CChhHHHHhhc-------cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhC-----C-CcEEEeec
Q 016370 78 KHDSRLEGLIK-------MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFST 139 (390)
Q Consensus 78 ~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~-~~~v~~Ss 139 (390)
+|.+++.++++ .+|+|||+||...... ..++....+++|+.++.++++++... + .++|++||
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS 178 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS 178 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 99999888876 4899999999875422 22344568889999999998876432 2 68999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceec
Q 016370 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWI 216 (390)
Q Consensus 140 ~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~ 216 (390)
...+.... ....|+.+|...+.+.+.++.+. |+++.+++||.+.
T Consensus 179 ~~~~~~~~---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 225 (299)
T 3t7c_A 179 IGGLRGAE---------------------------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVA 225 (299)
T ss_dssp GGGTSCCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred hhhccCCC---------------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcc
Confidence 76653321 23479999999999998887654 8999999999999
Q ss_pred CCCCCCCCCC--CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 217 GPRMDFIPGI--DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 217 G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.|........ ..+. ........+....... .... ..+...+|+|++++.++.... ...|++++|.+|
T Consensus 226 T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 295 (299)
T 3t7c_A 226 TPMLLNEPTYRMFRPD-LENPTVEDFQVASRQM-------HVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295 (299)
T ss_dssp STTTSSHHHHHHHCTT-SSSCCHHHHHHHHHHH-------SSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred Cccccccchhhhhhhh-hccchhhHHHHHhhhh-------cccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence 8864300000 0000 0000000000000000 0011 347789999999999987542 246899999986
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-21 Score=170.78 Aligned_cols=203 Identities=13% Similarity=0.095 Sum_probs=146.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
..+++|+||||||+|+||++++++|+++ |++|++++|+......+...... ....+.++.+|++|.+++.++++.
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAVEREIVA-AGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHH-hCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 3567789999999999999999999999 99999999987665443322111 235789999999999998887763
Q ss_pred ----ccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|+|||+||..... ...++....+++|+.++.++++++. +.+ .++|++||...+...
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 173 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV--------- 173 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC---------
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC---------
Confidence 89999999973211 1223445678899999999888764 344 899999997654322
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++||.+..+...
T Consensus 174 ------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~----------- 218 (262)
T 3rkr_A 174 ------------------------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV----------- 218 (262)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------
T ss_pred ------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc-----------
Confidence 13347999999999998887755 5899999999988765322
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.. .. ......++..+|+|+++..++....
T Consensus 219 --~~--------~~---------~~~~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 219 --GL--------SA---------KKSALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp -----------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred --cc--------cc---------ccccccCCCHHHHHHHHHHHhcCcc
Confidence 00 00 0112346789999999999998754
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=175.75 Aligned_cols=199 Identities=12% Similarity=0.079 Sum_probs=149.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|++.....+...... ...++.++.+|++|.+++.++++
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHh-cCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 467789999999999999999999999 99999999987654433221111 13478999999999998888776
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 175 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP---------- 175 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH----------
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC----------
Confidence 58999999997653221 1234467889999987776665 3455 7999999987664321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc------CccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN------GLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
+...|+.+|...|.+.+.++.+. +++++++||+.+.++... .
T Consensus 176 -----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~---------~ 223 (272)
T 1yb1_A 176 -----------------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK---------N 223 (272)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT---------C
T ss_pred -----------------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc---------c
Confidence 23479999999999998887653 799999999999877422 0
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.. .....+++++|+|++++.++..+
T Consensus 224 ---~~--------------------~~~~~~~~~~dva~~i~~~~~~~ 248 (272)
T 1yb1_A 224 ---PS--------------------TSLGPTLEPEEVVNRLMHGILTE 248 (272)
T ss_dssp ---TH--------------------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred ---cc--------------------ccccCCCCHHHHHHHHHHHHHcC
Confidence 00 01224788999999999999975
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-21 Score=169.68 Aligned_cols=221 Identities=13% Similarity=0.114 Sum_probs=156.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC--CChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI--KHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~--~d~~~~~~~~~--- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|+.+................+.++.+|+ +|.+++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 467899999999999999999999999 999999999876654433221111123678999999 88888877776
Q ss_pred ----cccEEEEeccccCC--ccc---cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCC
Q 016370 89 ----MADLTINLAAICTP--ADY---NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~--~~~---~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|+|||+||.... +.. .++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------- 160 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA------- 160 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT-------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC-------
Confidence 48999999997532 111 1233467889999999998887 4455 8999999976543211
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC--ccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG--LEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+...|+.+|...+.+.+.++.+++ +++..+.|+.+..+
T Consensus 161 --------------------------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-------------- 200 (252)
T 3f1l_A 161 --------------------------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA-------------- 200 (252)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH--------------
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc--------------
Confidence 234799999999999998887764 78888888877543
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHH
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~ 299 (390)
+.. ...... ....+...+|+|++++.++.... ...|+.+++.+| +..++.
T Consensus 201 ---~~~----~~~~~~---------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG-~~~~~~ 251 (252)
T 3f1l_A 201 ---MRA----SAFPTE---------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG-RKPGIS 251 (252)
T ss_dssp ---HHH----HHCTTC---------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-------
T ss_pred ---hhh----hhCCcc---------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCC-cCCCCC
Confidence 111 111111 11236678999999999987642 246899999997 565543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=169.58 Aligned_cols=211 Identities=11% Similarity=0.141 Sum_probs=158.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-----MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-----~~ 90 (390)
+||++|||||+|+||++++++|+++.|+.|++++|..... ...+.++.+|++|.+++.++++ ++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999994389999998875411 2467899999999999988886 58
Q ss_pred cEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCCccc
Q 016370 91 DLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163 (390)
Q Consensus 91 d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~ 163 (390)
|+|||+||....... .++....+++|+.++.++++++...- .++|++||...+....
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------- 135 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP---------------- 135 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT----------------
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC----------------
Confidence 999999998643222 23445678899999999999887654 4899999987653321
Q ss_pred cccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH-
Q 016370 164 YVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC- 239 (390)
Q Consensus 164 ~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~- 239 (390)
+...|+.+|...+.+.+.++. ..|+++.+++||.+.+|... .....
T Consensus 136 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------------~~~~~~ 185 (244)
T 4e4y_A 136 -----------------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR-------------NLIQKY 185 (244)
T ss_dssp -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH-------------HHHHHH
T ss_pred -----------------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH-------------HHHHhh
Confidence 234799999999999988876 45899999999999876321 11111
Q ss_pred ----------HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 240 ----------FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 240 ----------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........ .....+.+++|+|++++.++.... ...|+.+++.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 240 (244)
T 4e4y_A 186 ANNVGISFDEAQKQEEKE---------FPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG 240 (244)
T ss_dssp HHHHTCCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhcCCCHHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence 11122222 122347789999999999997543 246899999986
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=166.88 Aligned_cols=226 Identities=15% Similarity=0.117 Sum_probs=158.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+|++|||||+|.||++++++|++++ |+.|++++|+......+.... ..++.++.+|++|.++++++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999983 478999999876655443321 2478899999999999888876
Q ss_pred cccEEEEeccccCC-cc----ccCChhHHHHHhhhhHHHHHHHH----HhCCCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTP-AD----YNTRPLDTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|++||+||.... .. ..++....+++|+.++.++++++ ++.+.++|++||...+...
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~------------- 144 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYF------------- 144 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSS-------------
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCC-------------
Confidence 48999999998543 11 12334567889999999998887 4444799999997655332
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
.+...|+.+|...+.+.+.++.+. ++++.+++||.+..+..........+......
T Consensus 145 --------------------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--- 201 (254)
T 3kzv_A 145 --------------------SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAE--- 201 (254)
T ss_dssp --------------------CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHH---
T ss_pred --------------------CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHH---
Confidence 133479999999999999988765 89999999999998865411100000000111
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~ 292 (390)
.........| ...+...+|+|++++.++... ....|+.+++.++
T Consensus 202 -~~~~~~~~~~---------~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~ 247 (254)
T 3kzv_A 202 -QLKMFRGLKE---------NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP 247 (254)
T ss_dssp -HHHHHHHHHT---------TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred -HHHHHHHHHh---------cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence 1111111111 223677899999999998765 3357889998885
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-21 Score=172.86 Aligned_cols=233 Identities=12% Similarity=0.090 Sum_probs=159.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|++|||||+|+||++++++|+++ |++|++++|+.... ..+..... ....++.++.+|++|.+++..+++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999 99999999986532 21111000 013468899999999998887765
Q ss_pred --cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC--C-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|+|||+||...... ..++....+++|+.++.++++++... + .++|++||...+....
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 172 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------------ 172 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC------------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC------------
Confidence 4899999999864321 12344567889999999999988765 4 8999999976442210
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++..........+... ..
T Consensus 173 --------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~ 230 (283)
T 1g0o_A 173 --------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGE--NL 230 (283)
T ss_dssp --------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCT--TC
T ss_pred --------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhcccccc--cc
Confidence 02347999999999999887654 489999999999988632100000000000 00
Q ss_pred HHHHHHHHhc--CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLR--RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
-......+.. ..| ...+.+.+|+|++++.++.... ...|+.+++.+|
T Consensus 231 ~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG 280 (283)
T 1g0o_A 231 SNEEVDEYAAVQWSP---------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280 (283)
T ss_dssp CHHHHHHHHHHHSCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHhhcCCC---------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence 0011111111 111 1236789999999999987532 246889999886
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-21 Score=171.86 Aligned_cols=230 Identities=12% Similarity=0.064 Sum_probs=161.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+.++++|||||+|.||+++++.|.++ |++|++++|+.+....+...... ....+.++.+|++|.+++.++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVG-AGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTT-TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999 99999999987665443322111 23578899999999998888776
Q ss_pred -cccEEEEeccccCC-c----cccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTP-A----DYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 -~~d~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||.... . ...++....+++|+.++.++++++ ++.+ .++|++||...+.... .
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~---------~ 174 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT---------T 174 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---------S
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC---------C
Confidence 48999999998642 1 112234567889999999999887 4455 7999999976543110 0
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... ...
T Consensus 175 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--------~~~ 224 (283)
T 3v8b_A 175 ----------------------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT--------KLR 224 (283)
T ss_dssp ----------------------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT--------TBC
T ss_pred ----------------------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc--------ccc
Confidence 13347999999999999988766 479999999999988754310 000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcce--eeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQ--RTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. . ....+.......... ..+...+|+|++++.++.... ...|+++++.+|
T Consensus 225 ~~---~----~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 225 HE---E----ETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp CH---H----HHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cc---h----hhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 00 0 000011111111111 246789999999999887532 246899999886
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=169.96 Aligned_cols=239 Identities=10% Similarity=0.077 Sum_probs=162.3
Q ss_pred CCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 10 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.+..++++|++|||||+|+||++++++|+++ |++|++++++... ...+..... ....++.++.+|++|.+++.++++
T Consensus 11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRL-GAKVVVNYANSTKDAEKVVSEIK-ALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CCTTCCTTCEEEESCTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHH
T ss_pred cCCCCcCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3345678899999999999999999999999 9999998776432 222211110 123578999999999999888876
Q ss_pred -------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCC
Q 016370 89 -------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||...... ..++....+++|+.++.++++++...- .++|++||......
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 159 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF--------- 159 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC---------
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC---------
Confidence 4899999999875332 223455678899999999999887653 59999999652110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
+. .+...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..........+.
T Consensus 160 -~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~- 215 (270)
T 3is3_A 160 -SV----------------------PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN- 215 (270)
T ss_dssp -CC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTT-
T ss_pred -CC----------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhcccc-
Confidence 00 13457999999999999888766 4899999999999887432000000000
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.................| ...+.+.+|+|++++.++.... ...|+.+++.+|
T Consensus 216 ~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 268 (270)
T 3is3_A 216 GTSYTAEQRQQMAAHASP---------LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268 (270)
T ss_dssp GGGSCHHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ccccchHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence 000001111111121111 2236679999999999986532 246899999986
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-21 Score=171.30 Aligned_cols=222 Identities=14% Similarity=0.105 Sum_probs=159.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|++|||||+|+||++++++|.++ |++|++++++.. ....+..... ....++.++.+|++|.++++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIE-QAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467889999999999999999999999 999999877653 2222211111 123578899999999999888876
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||...... ..++....+++|+.++.++++++... +.++|++||....... .
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~----------~- 174 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP----------W- 174 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC----------S-
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC----------C-
Confidence 5899999999875322 22344567889999999999988654 2799999985332110 0
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.+...|+.+|...+.+.+.++.+. |+++.+++|+.+.++.... ...
T Consensus 175 ---------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~----------~~~ 223 (271)
T 3v2g_A 175 ---------------------PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA----------DGD 223 (271)
T ss_dssp ---------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS----------SCS
T ss_pred ---------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc----------cch
Confidence 133479999999999988887654 8999999999999886431 011
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
....+ ....+. ..+...+|+|++++.++... ....|+++++.+|
T Consensus 224 ~~~~~----~~~~~~---------~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 268 (271)
T 3v2g_A 224 HAEAQ----RERIAT---------GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268 (271)
T ss_dssp SHHHH----HHTCTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hHHHH----HhcCCC---------CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence 11111 122111 12567999999999988643 2356899999886
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-20 Score=170.10 Aligned_cols=232 Identities=17% Similarity=0.165 Sum_probs=160.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC----------------hhhhccccccccCCCCCeeEEeCCC
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN----------------DKIKHLLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~----------------~~~~~~~~~~~~~~~~~i~~~~~D~ 77 (390)
.+++|++|||||+|.||+++++.|.++ |++|++++|+. .......... .....++.++.+|+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv 85 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV-KGHNRRIVTAEVDV 85 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHH-HTTTCCEEEEECCT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeccccccccccccccccCCHHHHHHHHHHH-hhcCCceEEEEcCC
Confidence 567899999999999999999999999 99999998873 2221111110 01235789999999
Q ss_pred CChhHHHHhhc-------cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhC------CCcEEEeec
Q 016370 78 KHDSRLEGLIK-------MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSEN------NKRLIHFST 139 (390)
Q Consensus 78 ~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~v~~Ss 139 (390)
+|.+++.++++ .+|+|||+||...... ..++....+++|+.++.++++++... +.++|++||
T Consensus 86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS 165 (286)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence 99999988876 5899999999865432 22345567889999999998877432 258999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec
Q 016370 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI 216 (390)
Q Consensus 140 ~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 216 (390)
...+.... ....|+.+|...+.+.+.++.+ .|+++.+++||.+.
T Consensus 166 ~~~~~~~~---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 212 (286)
T 3uve_A 166 VGGLKAYP---------------------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVK 212 (286)
T ss_dssp GGGTSCCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred hhhccCCC---------------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 77653321 2347999999999999888765 58999999999999
Q ss_pred CCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC---eE--EecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEec
Q 016370 217 GPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP---LK--LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVG 290 (390)
Q Consensus 217 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~ 290 (390)
.+.... ......+........+ .. ....... ..+.+.+|+|++++.++.... ...|++++|.
T Consensus 213 T~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vd 280 (286)
T 3uve_A 213 TPMLHN-----------EGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPID 280 (286)
T ss_dssp STTTSS-----------HHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CCcccc-----------cchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeEC
Confidence 875430 0000000000000000 00 0001111 357899999999999986532 2568999999
Q ss_pred CC
Q 016370 291 NP 292 (390)
Q Consensus 291 ~~ 292 (390)
+|
T Consensus 281 GG 282 (286)
T 3uve_A 281 AG 282 (286)
T ss_dssp TT
T ss_pred Cc
Confidence 86
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=173.06 Aligned_cols=220 Identities=15% Similarity=0.135 Sum_probs=161.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||+|.||+++++.|+++ |++|++++|+.+......... ..++.++.+|++|.++++++++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 577899999999999999999999999 999999999876655443321 3578899999999999988876
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHH----HHhCC--CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKY----CSENN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~----~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.+++++ +++.+ .++|++||...+....
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 148 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP--------- 148 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT---------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC---------
Confidence 58999999998743222 223456788999999998887 44433 6999999976554321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ +|+++.+++||.+..+.... ..
T Consensus 149 ------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---------~~ 195 (247)
T 3rwb_A 149 ------------------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA---------SP 195 (247)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---------SG
T ss_pred ------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc---------cC
Confidence 2347999999999998888765 58999999999998763220 00
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......+.... .+ ...+...+|+|+++..++.... ...|+++++.+|
T Consensus 196 ~~~~~~~~~~~---~~---------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 243 (247)
T 3rwb_A 196 HNEAFGFVEML---QA---------MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243 (247)
T ss_dssp GGGGHHHHHHH---SS---------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhHHHHHHhcc---cc---------cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 01111111110 11 1235679999999999987643 246899999986
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=168.20 Aligned_cols=208 Identities=11% Similarity=0.090 Sum_probs=142.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||+|.||+++++.|.++ |++|++++|+.+....+...... ...++.++.+|++|.+++.++++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEA-AGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 56789999999999999999999999 99999999987765544322111 13578999999999999988887
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|++||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 150 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS------------ 150 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT------------
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC------------
Confidence 47999999998753221 2334567889999998888776 3444 7999999976543221
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccE-EEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEF-TIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~-~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+ .|+++ .++.||.+..+... .
T Consensus 151 ---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~-------------~ 196 (252)
T 3h7a_A 151 ---------------------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR-------------E 196 (252)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------
T ss_pred ---------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh-------------c
Confidence 2347999999999999888755 47899 89999988776432 1
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
....... ......... ++..+|+|++++.++..+.
T Consensus 197 ~~~~~~~---------~~~~~~~~~-~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 197 RREQMFG---------KDALANPDL-LMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHCCG
T ss_pred cchhhhh---------hhhhcCCcc-CCCHHHHHHHHHHHHhCch
Confidence 1111100 011112233 8899999999999999764
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=176.31 Aligned_cols=240 Identities=13% Similarity=0.087 Sum_probs=150.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-----hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-----DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-----~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
|.+|+||||||+|+||+++++.|+++ |++|++..|+. .....+..... ....++.++.+|++|.+++.++++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~-G~~V~~~~r~~~~r~~~~~~~l~~~~~-~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGA-GHRVYASMRDIVGRNASNVEAIAGFAR-DNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCTTTTTHHHHHHHHHHHH-HHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEecCcccccCHHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence 45689999999999999999999999 99999988863 11111111000 013578999999999999988887
Q ss_pred ------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCC
Q 016370 89 ------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||...... ..++....+++|+.|+.++++++ ++.+ .++|++||...+....
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~------ 154 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP------ 154 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC------
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC------
Confidence 5999999999764321 12234456789999999999988 5555 8999999987653211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
...+.|+.+|...|.+.+.++.+ .|+++++++||.+.++...+... ..+.
T Consensus 155 --------------------------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~-~~~~ 207 (324)
T 3u9l_A 155 --------------------------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHS-GVPD 207 (324)
T ss_dssp --------------------------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------C-BCCS
T ss_pred --------------------------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhccc-CCch
Confidence 02347999999999999888766 58999999999998765431100 0000
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecC-CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDG-GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.......+......+.+-.+... .....+..+++|+|++++.+++.+.......+.++.
T Consensus 208 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp 267 (324)
T 3u9l_A 208 --DHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDP 267 (324)
T ss_dssp --CHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECT
T ss_pred --HHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCC
Confidence 00111111000000000000000 000011257899999999999987423345666664
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.9e-21 Score=171.08 Aligned_cols=217 Identities=13% Similarity=0.098 Sum_probs=148.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|++|||||+|+||++++++|.++ |++|++++|+.+......... ..++.++.+|++|.+++.++++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEI----GDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 356688999999999999999999999 999999999876655443321 2578899999999999988886
Q ss_pred --cccEEEEeccccCCc-c----ccCChhHHHHHhhhhHHHHHHHHHh----C---CCcEEEeecccccccccCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-D----YNTRPLDTIYSNFIDALPVVKYCSE----N---NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-~----~~~~~~~~~~~nv~~~~~l~~~~~~----~---~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|+|||+||..... . ..++....+++|+.++.++++++.. . +.++|++||...+...
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------- 171 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-------- 171 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC--------
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC--------
Confidence 599999999986431 1 1223456788999998888776643 2 2589999997655322
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...+.+.+.++.+ .++++.+++|+.+..+...
T Consensus 172 -------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------- 216 (272)
T 4dyv_A 172 -------------------------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ---------- 216 (272)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------
T ss_pred -------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh----------
Confidence 13347999999999999888755 4899999999999876432
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.+.. +.+... .......++.++|+|++++.++..+.......+.+..
T Consensus 217 ---~~~~--------~~~~~~--~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~~ 263 (272)
T 4dyv_A 217 ---KMKA--------GVPQAD--LSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIMA 263 (272)
T ss_dssp --------------------------------CHHHHHHHHHHHHHSCTTSCCCEEEEEE
T ss_pred ---hhcc--------cchhhh--hcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEec
Confidence 0100 000000 0112234789999999999999987644444444443
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=170.36 Aligned_cols=220 Identities=11% Similarity=0.038 Sum_probs=161.5
Q ss_pred CCCCCEEEEEcCchh--HHHHHHHHHHhhCCCeEEEEecCC--hhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 14 PIKPVTICMIGAGGF--IGSHLCEKILLETPHKILALDVYN--DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~--iG~~l~~~L~~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.+++|+||||||+|+ ||.+++++|+++ |++|++++|+. .....+... ...+.++.+|++|.+++.++++.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAE-----FNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGG-----GCCSEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHh-----cCCceEEEeecCCHHHHHHHHHH
Confidence 467789999999988 999999999999 99999999987 333322221 23588999999999998888763
Q ss_pred -------ccEEEEeccccCCc---------cccCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCC
Q 016370 90 -------ADLTINLAAICTPA---------DYNTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 90 -------~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~ 149 (390)
+|+|||+||..... ...++....+++|+.++.++++++... +.++|++||...+....
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 174 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP-- 174 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT--
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC--
Confidence 79999999987531 222344567889999999999887543 37999999976653321
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
+.+.|+.+|...+.+.+.++.+ .|+++.+++|+.+..+....
T Consensus 175 -------------------------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---- 219 (280)
T 3nrc_A 175 -------------------------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG---- 219 (280)
T ss_dssp -------------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG----
T ss_pred -------------------------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc----
Confidence 3347999999999999887655 58999999999999875431
Q ss_pred CCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 227 DGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
. .....+........+. ..+..++|+|++++.++... ....|+++++.+|
T Consensus 220 ------~-~~~~~~~~~~~~~~p~---------~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 220 ------I-SNFKKMLDYNAMVSPL---------KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp ------C-TTHHHHHHHHHHHSTT---------CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred ------C-cchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence 0 0112222232222221 23567999999999988753 2257899999987
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=170.60 Aligned_cols=231 Identities=14% Similarity=0.123 Sum_probs=160.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-------------ChhhhccccccccCCCCCeeEEeCCCCCh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-------------NDKIKHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-------------~~~~~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
.+++|++|||||+|.||.++++.|.++ |++|++++|. ............ .....+.++.+|++|.
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE-AANRRIVAAVVDTRDF 85 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECCCCCH
Confidence 467899999999999999999999999 9999999883 222222111110 1235788999999999
Q ss_pred hHHHHhhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----C--CCcEEEeeccccc
Q 016370 81 SRLEGLIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFSTCEVY 143 (390)
Q Consensus 81 ~~~~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~--~~~~v~~Ss~~vy 143 (390)
+++.++++ .+|++||+||...... ..++....+++|+.++.++++++.. . +.++|++||...+
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence 99888876 3899999999875432 2234556788999999998887533 2 2589999998765
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCC
Q 016370 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 144 ~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~ 220 (390)
.... ....|+.+|...+.+.+.++.+. |+++.+++|+.+..+..
T Consensus 166 ~~~~---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 212 (277)
T 3tsc_A 166 KMQP---------------------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG 212 (277)
T ss_dssp SCCS---------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG
T ss_pred CCCC---------------------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc
Confidence 3321 23479999999999998887654 79999999999988753
Q ss_pred CCCCCCCCCCCCchhhHHHHHHHHhcCCC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. ................ .......... -+.+.+|+|++++.++.... ...|+++++.+|
T Consensus 213 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 273 (277)
T 3tsc_A 213 S------------GDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273 (277)
T ss_dssp S------------HHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c------------chhhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence 3 0111111111111110 0001111112 37899999999999987543 246899999986
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=165.25 Aligned_cols=212 Identities=12% Similarity=0.072 Sum_probs=153.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
+||+||||||+|+||++++++|+++ |++|++++|+.+...............++.++.+|++|.+++.++++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999 99999999987655443322111123578999999999999998887
Q ss_pred cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
++|+|||+||...... ..++....+++|+.++.++++++.. .+.++|++||...+...
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-------------- 145 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI-------------- 145 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC--------------
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC--------------
Confidence 5899999999875432 2234556788999999999988754 23667777765433211
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
.....|+.+|...+.+.+.+..+ .++++.+++||.+-.+.... .
T Consensus 146 -------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~-------------~--- 190 (235)
T 3l77_A 146 -------------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS-------------K--- 190 (235)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC-------------C---
T ss_pred -------------------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc-------------c---
Confidence 02247999999999999887433 48999999999987664320 0
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCC-CCceEEecC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGN 291 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~-~~~~~nv~~ 291 (390)
.. ......++..+|+|+++..++..+... .+++....+
T Consensus 191 ------~~--------~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~ 229 (235)
T 3l77_A 191 ------PG--------KPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSV 229 (235)
T ss_dssp ------SC--------CCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCT
T ss_pred ------CC--------cccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeec
Confidence 00 011124778999999999999987543 344444444
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-21 Score=168.89 Aligned_cols=203 Identities=13% Similarity=0.120 Sum_probs=151.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
|++|+||||||+|+||++++++|+++ |++|++++|++.... ....++.+|++|.+++.++++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 999999999875432 235678899999988887775
Q ss_pred ---cccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|+|||+||....... .++....+++|+.++.++++++...- .++|++||...+...
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------- 137 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT----------- 137 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-----------
Confidence 58999999997643221 23345678899999999998886642 599999998765321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-----CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-----GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.+...|+.+|...+.+.+.++.+. |+++++++|+.+.++...
T Consensus 138 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~----------- 184 (236)
T 1ooe_A 138 ----------------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR----------- 184 (236)
T ss_dssp ----------------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------
T ss_pred ----------------------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------
Confidence 133479999999999999987654 499999999998775211
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~~~ 292 (390)
. ..... ....++..+|+|++++.++..+. ...|+.+++.++
T Consensus 185 ------~----~~~~~---------~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 185 ------K----WMPNA---------DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTE 227 (236)
T ss_dssp ------H----HSTTC---------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred ------h----cCCCc---------cccccCCHHHHHHHHHHHHcCCCcccccccEEEEecC
Confidence 1 11110 11235678999999997774432 235788888875
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=9.9e-21 Score=172.13 Aligned_cols=222 Identities=15% Similarity=0.186 Sum_probs=157.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCC----hhHHHHhh
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKH----DSRLEGLI 87 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d----~~~~~~~~ 87 (390)
..|++|++|||||+|+||+++++.|+++ |++|++++|+. +....+..........++.++.+|++| .+++.+++
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQT-GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHH-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 3467789999999999999999999999 99999999987 544333221110113578899999999 88888777
Q ss_pred c-------cccEEEEeccccCCccc--------------cCChhHHHHHhhhhHHHHHHHHHhC-----------CCcEE
Q 016370 88 K-------MADLTINLAAICTPADY--------------NTRPLDTIYSNFIDALPVVKYCSEN-----------NKRLI 135 (390)
Q Consensus 88 ~-------~~d~Vih~a~~~~~~~~--------------~~~~~~~~~~nv~~~~~l~~~~~~~-----------~~~~v 135 (390)
+ ++|+|||+||....... ..+....+++|+.++..+++++... +.++|
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 5 58999999997643221 1223456789999999998877543 23899
Q ss_pred EeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeec
Q 016370 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRP 212 (390)
Q Consensus 136 ~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~ 212 (390)
++||...+.... +...|+.+|...+.+.+.++.+ .|+++++++|
T Consensus 178 ~isS~~~~~~~~---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P 224 (288)
T 2x9g_A 178 NLCDAMVDQPCM---------------------------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP 224 (288)
T ss_dssp EECCTTTTSCCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred EEecccccCCCC---------------------------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEe
Confidence 999987654211 2347999999999888887655 3899999999
Q ss_pred ceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeee-eeHHHHHHHHHHHHhCC-CCCCCceEEec
Q 016370 213 FNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTF-IYIKDAIEAVLLMIENP-ARANGHIFNVG 290 (390)
Q Consensus 213 ~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~l~~~-~~~~~~~~nv~ 290 (390)
+.+++|. .. ... .........++ ..+ ...+|+|++++.++... ....|+.+++.
T Consensus 225 G~v~t~~-~~----------~~~----~~~~~~~~~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vd 280 (288)
T 2x9g_A 225 GVSLLPV-AM----------GEE----EKDKWRRKVPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVD 280 (288)
T ss_dssp SSCSCCT-TS----------CHH----HHHHHHHTCTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred ccccCcc-cc----------ChH----HHHHHHhhCCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence 9999885 30 011 11222222221 114 67999999999998753 22467899998
Q ss_pred CC
Q 016370 291 NP 292 (390)
Q Consensus 291 ~~ 292 (390)
+|
T Consensus 281 GG 282 (288)
T 2x9g_A 281 GG 282 (288)
T ss_dssp TT
T ss_pred cc
Confidence 86
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-20 Score=167.08 Aligned_cols=202 Identities=11% Similarity=0.146 Sum_probs=153.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
+..+|+||||||+|+||++++++|+++ |++|++++|+..... -..+.+|++|.+++.++++.
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSK-SWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINSK 84 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence 345689999999999999999999999 999999999875432 23567899999988887764
Q ss_pred ---ccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|+|||+||...... ..++....+++|+.++.++++++...- .++|++||...+...
T Consensus 85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------ 152 (251)
T 3orf_A 85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT------------ 152 (251)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------
T ss_pred cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC------------
Confidence 699999999764321 223455678899999999999887643 589999998765322
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+.++..
T Consensus 153 ---------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~------------- 198 (251)
T 3orf_A 153 ---------------------SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN------------- 198 (251)
T ss_dssp ---------------------TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-------------
T ss_pred ---------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-------------
Confidence 13347999999999999998877 479999999998876521
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC-C-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-P-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~-~-~~~~~~~~nv~~~ 292 (390)
...... .....+++++|+|++++.++.. . ....|+.+++.++
T Consensus 199 --------~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g 242 (251)
T 3orf_A 199 --------RKYMSD---------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETK 242 (251)
T ss_dssp --------HHHCTT---------SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred --------hhhccc---------ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecC
Confidence 111111 1234578899999999999988 2 2246889999875
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=173.60 Aligned_cols=232 Identities=11% Similarity=0.084 Sum_probs=148.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----ccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----ADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----~d~ 92 (390)
||+||||||+|+||++++++|+++ |++|++++|++..... . +.+|++|.+++.++++. +|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 468999999999999999999999 9999999997653221 1 56899999999988864 599
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCCccc-ccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY-YVL 166 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~-~~~ 166 (390)
|||+||.... .......+++|+.++.++++++. +.+ .++|++||...+......+..+......+... ...
T Consensus 66 lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T 1fjh_A 66 LVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI 142 (257)
T ss_dssp EEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence 9999997641 23467889999999999988875 444 89999999887732211100000000000000 000
Q ss_pred ccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH-HHHH
Q 016370 167 KEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA-CFSN 242 (390)
Q Consensus 167 ~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (390)
.++. ....+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++.... ... ....
T Consensus 143 ~~~~------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------------~~~~~~~~ 203 (257)
T 1fjh_A 143 VEHA------GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA-------------GLQDPRYG 203 (257)
T ss_dssp HHTC------CTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------
T ss_pred hhcc------cCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchh-------------hccchhHH
Confidence 0000 00013457999999999999888765 58999999999998875330 000 0000
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..... + ......+++++|+|++++.++..+. ...|+.|++.++
T Consensus 204 ~~~~~--~-----~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG 247 (257)
T 1fjh_A 204 ESIAK--F-----VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp -------C-----CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHh--c-----ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 10000 0 0111247899999999999987642 246889999886
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=171.40 Aligned_cols=223 Identities=7% Similarity=0.021 Sum_probs=159.5
Q ss_pred CCCCCEEEEEcCchh--HHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGF--IGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~--iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++|||||+|+ ||+++++.|.++ |++|++++|++.....+...... ..++.++.+|++|.++++++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEE--LGAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHH--HTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh--cCCceEEECCCCCHHHHHHHHHHHH
Confidence 567899999999999 999999999999 99999999985432222211111 1367899999999999988876
Q ss_pred ----cccEEEEeccccCC--------ccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTP--------ADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|+|||+||.... ....++....+++|+.++.++++++...- .++|++||...+....
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------ 178 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP------ 178 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT------
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC------
Confidence 48999999998641 11223455678899999999999886542 5899999977654321
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+ .|+++.+++|+.+..+....
T Consensus 179 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-------- 223 (293)
T 3grk_A 179 ---------------------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASG-------- 223 (293)
T ss_dssp ---------------------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------
T ss_pred ---------------------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhc--------
Confidence 2347999999999999888755 48999999999998875431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. .............|. ..+...+|+|++++.++... ....|+++++.+|
T Consensus 224 --~~-~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (293)
T 3grk_A 224 --IG-DFRYILKWNEYNAPL---------RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274 (293)
T ss_dssp ---C-CHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --cc-chHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence 00 111222222222222 23567999999999998753 2256899999997
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=169.74 Aligned_cols=221 Identities=13% Similarity=0.077 Sum_probs=154.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
++|++|||||+|.||++++++|.++ |++|+++.++ ......+..... ....++.++.+|++|.++++++++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIE-AAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999 9999988544 433332221111 123578899999999999888876
Q ss_pred -cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
++|+|||+||......... +....+++|+.++.++++++...- .++|++||...+....
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 170 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------- 170 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-------------
Confidence 4899999999875432222 234566799999999998876542 6899999976543321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
....|+.+|...+.+.+.++.+. |+++.++.||.+..+.... ..-
T Consensus 171 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------------~~~ 218 (267)
T 3u5t_A 171 --------------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE------------GKS 218 (267)
T ss_dssp --------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------------
T ss_pred --------------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc------------cCC
Confidence 23479999999999999887764 7999999999998764320 000
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........... ....+..++|+|++++.++.... ...|+++++.+|
T Consensus 219 ~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 219 DEVRDRFAKLA---------PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp --CHHHHHTSS---------TTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred HHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 11111222222 22346789999999999987543 246889999885
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=174.58 Aligned_cols=221 Identities=15% Similarity=0.100 Sum_probs=158.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCCCCCeeEEeCCCCChh------------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHDS------------ 81 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~------------ 81 (390)
+++|+||||||+|+||+++++.|+++ |++|++++ |+.+....+..........++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~-G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 122 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence 56789999999999999999999999 99999999 87655443322111001347889999999988
Q ss_pred -----HHHHhhc-------cccEEEEeccccCCccc------------------cCChhHHHHHhhhhHHHHHHHHHh--
Q 016370 82 -----RLEGLIK-------MADLTINLAAICTPADY------------------NTRPLDTIYSNFIDALPVVKYCSE-- 129 (390)
Q Consensus 82 -----~~~~~~~-------~~d~Vih~a~~~~~~~~------------------~~~~~~~~~~nv~~~~~l~~~~~~-- 129 (390)
++.++++ .+|+|||+||....... .++....+++|+.++.++++++..
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776 58999999998643222 222345678999999998887653
Q ss_pred --C-------CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHh
Q 016370 130 --N-------NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200 (390)
Q Consensus 130 --~-------~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~ 200 (390)
. +.+||++||...+... .+...|+.+|...+.+.+.++
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~---------------------------------~~~~~Y~asKaal~~l~~~la 249 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPL---------------------------------LGYTIYTMAKGALEGLTRSAA 249 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCC---------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcCCCCCcEEEEECchhhccCC---------------------------------CCcHHHHHHHHHHHHHHHHHH
Confidence 1 3589999997655321 123479999999999998887
Q ss_pred hhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHh
Q 016370 201 AEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIE 277 (390)
Q Consensus 201 ~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~ 277 (390)
.+. |+++++++|+.+..+. .. . ......+....|+ + ..+...+|+|++++.++.
T Consensus 250 ~el~~~gIrvn~v~PG~v~T~~-~~----------~----~~~~~~~~~~~p~-----~---~r~~~pedvA~~v~~l~s 306 (328)
T 2qhx_A 250 LELAPLQIRVNGVGPGLSVLVD-DM----------P----PAVWEGHRSKVPL-----Y---QRDSSAAEVSDVVIFLCS 306 (328)
T ss_dssp HHHGGGTEEEEEEEESSBSCCC-CS----------C----HHHHHHHHTTCTT-----T---TSCBCHHHHHHHHHHHHS
T ss_pred HHHhhcCcEEEEEecCcccCCc-cc----------c----HHHHHHHHhhCCC-----C---CCCCCHHHHHHHHHHHhC
Confidence 654 8999999999998875 30 1 1222223222221 0 025679999999999986
Q ss_pred CC-CCCCCceEEecCC
Q 016370 278 NP-ARANGHIFNVGNP 292 (390)
Q Consensus 278 ~~-~~~~~~~~nv~~~ 292 (390)
.. ....|+++++.+|
T Consensus 307 ~~~~~itG~~i~vdGG 322 (328)
T 2qhx_A 307 SKAKYITGTCVKVDGG 322 (328)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred ccccCccCcEEEECCC
Confidence 43 2246889999886
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=164.91 Aligned_cols=215 Identities=14% Similarity=0.155 Sum_probs=152.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|++|||||+|+||+++++.|.++ |++|++++|+.+....+.... ..++.++.+|++|.+++.++++ ++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999 999999999876554433211 2468899999999999988876 48
Q ss_pred cEEEEeccccC-Cc----cccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 91 DLTINLAAICT-PA----DYNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 91 d~Vih~a~~~~-~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
|+|||+||... .. ...++....+++|+.++.++++++. +.+ .++|++||...+...
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------- 141 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-------------- 141 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC--------------
Confidence 99999999753 11 1123455678899999988888774 344 899999997654321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecC-CCCCCCCCCCCCCCCchhh
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIG-PRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G-~~~~~~~~~~~~~~~~~~~ 236 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++||.+.| +... ..
T Consensus 142 -------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~-------------~~ 189 (248)
T 3asu_A 142 -------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN-------------VR 189 (248)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC--------------------
T ss_pred -------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh-------------hc
Confidence 12347999999999999887655 489999999999984 4321 00
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
...- ..... ... ....++..+|+|++++.++..+....++.+.+.+.
T Consensus 190 ~~~~-~~~~~----~~~----~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 190 FKGD-DGKAE----KTY----QNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp ------------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred ccCc-hHHHH----HHH----hccCCCCHHHHHHHHHHHhcCCccceeeEEEEccc
Confidence 0000 00000 000 01124689999999999998766566777777664
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-21 Score=170.19 Aligned_cols=235 Identities=11% Similarity=0.054 Sum_probs=160.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|++|||||+|.||++++++|.++ |++|++++|+.+........... ....++.++.+|++|.+++.++++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987655443322111 112358899999999998887775
Q ss_pred ---cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||....... .++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP--------- 154 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC---------
Confidence 48999999998653222 23345678899999999988874 333 6899999976543221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+. |+++.+++||.+..|....... .....
T Consensus 155 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~ 207 (265)
T 3lf2_A 155 ------------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFE---AREER 207 (265)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHT---C----
T ss_pred ------------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhh---hhhhh
Confidence 23479999999999998887654 8999999999998763210000 00000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
..-...+......... .....+...+|+|++++.++... ....|+++++.+|
T Consensus 208 ~~~~~~~~~~~~~~~~-------~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 260 (265)
T 3lf2_A 208 ELDWAQWTAQLARNKQ-------IPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG 260 (265)
T ss_dssp --CHHHHHHHHHHHTT-------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred ccCHHHHHHHHhhccC-------CCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence 0000111111111100 11223677999999999998753 2246889999986
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=172.78 Aligned_cols=234 Identities=15% Similarity=0.170 Sum_probs=159.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh------------hhhccccccccCCCCCeeEEeCCCCCh
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND------------KIKHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~------------~~~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
..+++|+||||||+|+||+++++.|+++ |++|++++|... ......... ......+.++.+|++|.
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQD-GADIVAIDLCRQQPNLDYAQGSPEELKETVRLV-EEQGRRIIARQADVRDL 119 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHH-HHTTCCEEEEECCTTCH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHC-CCeEEEEecccccccccccccCHHHHHHHHHHH-HhcCCeEEEEECCCCCH
Confidence 3567889999999999999999999999 999999987621 111111100 01235788999999999
Q ss_pred hHHHHhhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CC--CcEEEeeccccc
Q 016370 81 SRLEGLIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVY 143 (390)
Q Consensus 81 ~~~~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~v~~Ss~~vy 143 (390)
+++.++++ .+|+|||+||...... ..++....+++|+.++.++++++.. .+ .++|++||...+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~ 199 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL 199 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence 99888876 4899999999875422 2234456788999999998887733 22 579999997665
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCC
Q 016370 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 144 ~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~ 220 (390)
.... ....|+.+|...+.+.+.++.+ .|+++.+++||.+.++..
T Consensus 200 ~~~~---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 246 (317)
T 3oec_A 200 RGAP---------------------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246 (317)
T ss_dssp SCCT---------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred CCCC---------------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccc
Confidence 3321 2347999999999999988766 489999999999988642
Q ss_pred CCCCCCCCCCCCchhhHHHHHHHHhcCCC---eEEe-cCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQP---LKLV-DGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. ......+......... .... ........+++++|+|++++.++.... ...|++++|.+|
T Consensus 247 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG 312 (317)
T 3oec_A 247 LN-----------EKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312 (317)
T ss_dssp HC-----------HHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cc-----------hhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence 10 0000000000000000 0000 000111468899999999999886532 246899999986
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=168.97 Aligned_cols=223 Identities=13% Similarity=0.087 Sum_probs=154.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh---hhccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK---IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
.+++|++|||||+|.||++++++|.++ |++|++++|.... ...+..... ....++.++.+|++|.+++.++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALE-SVNLVLHYHQAKDSDTANKLKDELE-DQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTS-SCEEEEEESCGGGHHHHHHHHHHHH-TTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecCccCHHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 467889999999999999999999999 9999998875432 222111111 123578899999999999988886
Q ss_pred -----cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC--C-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 -----MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||....... .++....+++|+.++.++++++... + .++|++||...+....
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~--------- 156 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG--------- 156 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC---------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC---------
Confidence 48999999998754322 2234456779999999999998765 3 7999999987655431
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+. |+++.++.||.+..+...
T Consensus 157 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~------------ 200 (262)
T 3ksu_A 157 ------------------------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFY------------ 200 (262)
T ss_dssp ------------------------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHH------------
T ss_pred ------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc------------
Confidence 22369999999999999887665 799999999988654211
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
...................+...+|+|++++.++.......|+.+++.+|
T Consensus 201 ---------~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg 250 (262)
T 3ksu_A 201 ---------GQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGG 250 (262)
T ss_dssp ---------TCC------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTT
T ss_pred ---------ccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCC
Confidence 00000001111111223346789999999999988633357899999987
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=167.19 Aligned_cols=207 Identities=15% Similarity=0.124 Sum_probs=145.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
.+|++|||||+|.||+++++.|.++ |++|++++|+.+....+...... ....+.++.+|++|.+++.++++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRD-AGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999 99999999987665443322111 13568889999999998888776
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||....... .++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~------------ 148 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP------------ 148 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC------------
Confidence 48999999998753221 23445677899999988877663 334 7999999976653321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+. ++++.+++||.+..+.... ..
T Consensus 149 ---------------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~-------------~~- 193 (264)
T 3tfo_A 149 ---------------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT-------------IT- 193 (264)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------
T ss_pred ---------------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc-------------cc-
Confidence 23479999999999998887665 8999999999987764320 00
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
......... .....++..+|+|++++.++..+.
T Consensus 194 -------~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 194 -------HEETMAAMD--TYRAIALQPADIARAVRQVIEAPQ 226 (264)
T ss_dssp -----------------------CCCHHHHHHHHHHHHHSCT
T ss_pred -------chhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCc
Confidence 000000000 011124689999999999999875
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=167.50 Aligned_cols=221 Identities=12% Similarity=0.085 Sum_probs=150.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
..|+ |++|||||+|+||+++++.|+++ |++|++++|+.+....+...... ..++.++.+|++|.+++.++++.
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 93 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEA-GWSLVLTGRREERLQALAGELSA--KTRVLPLTLDVRDRAAMSAAVDNLPE 93 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3455 79999999999999999999999 99999999987655443322111 13688999999999999988865
Q ss_pred ----ccEEEEeccccCC-cc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-C-cEEEeecccccccccCCCCCCC
Q 016370 90 ----ADLTINLAAICTP-AD----YNTRPLDTIYSNFIDALPVVKYC----SENN-K-RLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 90 ----~d~Vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~-~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
+|+|||+||.... .. ..++....+++|+.++.++++++ ++.+ . ++|++||...+....
T Consensus 94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~------- 166 (272)
T 2nwq_A 94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP------- 166 (272)
T ss_dssp GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT-------
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC-------
Confidence 5999999997642 11 12344567889999987776655 3444 5 999999976653211
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+.++....
T Consensus 167 --------------------------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~--------- 211 (272)
T 2nwq_A 167 --------------------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV--------- 211 (272)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc---------
Confidence 2347999999999999888755 47999999999998774320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.... . ......... ...++..+|+|++++.++..+....++.+.+.++
T Consensus 212 ----~~~~---~--~~~~~~~~~----~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 212 ----RFGG---D--QARYDKTYA----GAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp ---------------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred ----cccc---c--hHHHHHhhc----cCCCCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence 0000 0 000000000 0124689999999999998765445667777654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=169.47 Aligned_cols=222 Identities=12% Similarity=0.102 Sum_probs=158.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC---eEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc--
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH---KILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
+.+|++|||||+|.||+++++.|+++ |+ .|++++|+.+....+....... ...++.++.+|++|.++++++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEA-SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHc-CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 56789999999999999999999998 77 9999999876655443221110 13468899999999999988886
Q ss_pred -----cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCC
Q 016370 89 -----MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~------ 183 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP------ 183 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT------
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCC------
Confidence 3899999999764211 22345567889999999999887 3444 8999999976543211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+ .|+++.+++||.+..+....
T Consensus 184 ---------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-------- 228 (287)
T 3rku_A 184 ---------------------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLV-------- 228 (287)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHH--------
T ss_pred ---------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccc--------
Confidence 3347999999999999988766 58999999999998763110
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
................ ..+..+|+|++++.++..... ..++++++.++
T Consensus 229 -~~~~~~~~~~~~~~~~-------------~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g 277 (287)
T 3rku_A 229 -RYRGNEEQAKNVYKDT-------------TPLMADDVADLIVYATSRKQNTVIADTLIFPTN 277 (287)
T ss_dssp -HTTTCHHHHHHHHTTS-------------CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred -cccCcHHHHHHhhccc-------------CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCC
Confidence 0000001111111111 123799999999999987642 34678888875
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=170.22 Aligned_cols=224 Identities=11% Similarity=0.036 Sum_probs=159.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||+|.||+++++.|+++ |++|++++|+......+...... ....+.++.+|++|.+++..+++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGA-GAHVILHGVKPGSTAAVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSTTTTHHHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 67789999999999999999999999 99999999987655443322111 23578999999999988888776
Q ss_pred cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|++||+||....... .++....+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------- 175 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK------------- 175 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-------------
Confidence 58999999997643222 2234557889999999998877 3344 799999997665421
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
.+...|+.+|...+.+.+.++.+. |+++.+++||.+..+.... ....
T Consensus 176 --------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----------~~~~ 225 (275)
T 4imr_A 176 --------------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD----------RRAQ 225 (275)
T ss_dssp --------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH----------HHHH
T ss_pred --------------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc----------cccc
Confidence 123469999999999998887664 8999999999997763210 0000
Q ss_pred HHHHHHHHhcCC-CeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQ-PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............ ++ .-+...+|+|++++.++.... ...|+++++.+|
T Consensus 226 ~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 226 DPEGWDEYVRTLNWM---------GRAGRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp CHHHHHHHHHHHSTT---------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred ChHHHHHHHhhcCcc---------CCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 011111111111 11 124568899999999887542 246899999875
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=169.14 Aligned_cols=210 Identities=14% Similarity=0.123 Sum_probs=145.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||.++++.|.++ |++|++++|+.+................+.++.+|++|.+++.++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 457789999999999999999999999 99999999987655443322111112335899999999999888876
Q ss_pred --cccEEEEeccccCCc-----cccCChhHHHHHhhhhHHHHHHHHHh----C---CCcEEEeecccccccccCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSE----N---NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~----~---~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|+|||+||..... ...++....+++|+.++.++++++.. . +.++|++||...+...
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------- 180 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR-------- 180 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC--------
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC--------
Confidence 379999999976431 11234455788999998887776543 2 2589999997654321
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+..+...
T Consensus 181 -------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------- 225 (281)
T 4dry_A 181 -------------------------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA---------- 225 (281)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--------------
T ss_pred -------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh----------
Confidence 13347999999999999888755 5899999999998776432
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.+....... ........++..+|+|++++.++..+.
T Consensus 226 -------~~~~~~~~~------~~~~~~~~~~~pedvA~~v~fL~s~~~ 261 (281)
T 4dry_A 226 -------RMSTGVLQA------NGEVAAEPTIPIEHIAEAVVYMASLPL 261 (281)
T ss_dssp ----------CEEECT------TSCEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred -------hhcchhhhh------hhcccccCCCCHHHHHHHHHHHhCCCc
Confidence 000000000 001112247889999999999999875
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-20 Score=167.03 Aligned_cols=202 Identities=9% Similarity=0.008 Sum_probs=147.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||+|+||+++++.|+++ |++|++++|+++....+...........+.++.+|++|.+++..+++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987655443221111012368899999999988887775
Q ss_pred --cccEEEEe-ccccCCccc---cCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINL-AAICTPADY---NTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~-a~~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+ |+....... ..+....+++|+.++.++++++... +.++|++||...+....
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 172 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP----------- 172 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT-----------
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC-----------
Confidence 58999999 565432211 2234567889999999998877542 37999999986553321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-----CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-----GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+.+.|+.+|...+.+.+.+..+. ++++++++||.+..+.
T Consensus 173 ----------------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-------------- 216 (286)
T 1xu9_A 173 ----------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------------- 216 (286)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH--------------
T ss_pred ----------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh--------------
Confidence 33479999999999988776543 8999999999886542
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
... ... +.....+++.+|+|+.++.+++..
T Consensus 217 ---~~~----~~~---------~~~~~~~~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 217 ---AMK----AVS---------GIVHMQAAPKEECALEIIKGGALR 246 (286)
T ss_dssp ---HHH----HSC---------GGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred ---HHH----hcc---------ccccCCCCCHHHHHHHHHHHHhcC
Confidence 111 011 111235688999999999999875
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-20 Score=163.05 Aligned_cols=197 Identities=13% Similarity=0.110 Sum_probs=144.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
|.+|+||||||+|+||++++++|.++ |++|++++|+.+......... ..++.++.+|++|.++++++++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLL----GNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999 999999999877655443321 1368899999999998888776
Q ss_pred -cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHh----CCCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSE----NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
.+|+|||+||...... ..++....+++|+.++.++++++.. .+.++|++||...+....
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 143 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA------------ 143 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS------------
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC------------
Confidence 4799999999864321 2234556788999999988887743 224899999976543221
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...+.+.+.++.+ .|+++.+++||.+-.+... ..
T Consensus 144 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------------~~ 189 (235)
T 3l6e_A 144 ---------------------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD-------------NT 189 (235)
T ss_dssp ---------------------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------
T ss_pred ---------------------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh-------------cc
Confidence 2347999999999999988765 4799999999999766422 00
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
. .. ....++..+|+|++++.++..+.
T Consensus 190 --------~-~~---------~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 190 --------D-HV---------DPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp -------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred --------C-CC---------CCcCCCCHHHHHHHHHHHHhCCC
Confidence 0 00 01147889999999999998653
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.1e-20 Score=162.63 Aligned_cols=211 Identities=13% Similarity=0.106 Sum_probs=150.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|.||++++++|.++ |++|++++|+.+....+...... ...++.++.+|++|.+++..+++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTA-AGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999999 99999999987655433221111 13468899999999998888776
Q ss_pred --cccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||....... .++....+++|+.++.++++++... +.++|++||...+....
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 150 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVR----------- 150 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCT-----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCC-----------
Confidence 58999999997643221 1234457889999999998877532 26999999976543211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
+...|+.+|...+.+.+.++.+ .|+++++++||.+..+.... ....
T Consensus 151 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------~~~~ 199 (247)
T 2jah_A 151 ----------------------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH---------ITHT 199 (247)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG---------CCCH
T ss_pred ----------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc---------ccch
Confidence 2347999999999888877654 48999999999998874320 0000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
......... + + ++.++..+|+|++++.++..+.
T Consensus 200 ~~~~~~~~~----~------~--~~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 200 ATKEMYEQR----I------S--QIRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp HHHHHHHHH----T------T--TSCCBCHHHHHHHHHHHHHSCT
T ss_pred hhHHHHHhc----c------c--ccCCCCHHHHHHHHHHHhCCCc
Confidence 111111111 0 0 1125789999999999998753
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=165.65 Aligned_cols=222 Identities=15% Similarity=0.136 Sum_probs=155.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||+|+||+++++.|+++ |++|++++|+.+....+...... ...++.++.+|++|.+++..++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467889999999999999999999999 99999999987654433221111 13468899999999998887776
Q ss_pred --cccEEEEecccc-CCcc----ccCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAIC-TPAD----YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|+|||+||.. .... ..++....+++|+.++.++++++... + .++|++||...+....
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 152 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP--------- 152 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT---------
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC---------
Confidence 589999999976 2211 12234567889999999988876542 4 7999999976553321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ .|+++++++|+.+..+...
T Consensus 153 ------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------------ 196 (262)
T 1zem_A 153 ------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW------------ 196 (262)
T ss_dssp ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHH------------
T ss_pred ------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhh------------
Confidence 2347999999999888877644 4899999999988665311
Q ss_pred hhhH---------------HH-HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVL---------------AC-FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~---------------~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... .. ....+....|+ ..+...+|+|++++.++.... ...|+.+++.+|
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 197 -ERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp -HHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred -hhccchhhhccccccccCHHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 000 00 11111111111 125678999999999887532 246788888763
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-20 Score=162.94 Aligned_cols=195 Identities=13% Similarity=0.106 Sum_probs=143.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----ccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----ADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----~d~ 92 (390)
||+||||||+|+||++++++|+++ |++|++++|+.+....+.... ..++.++.+|+++.+++.++++. .|+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 568999999999999999999999 999999999887665544321 35788999999999999999876 499
Q ss_pred EEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhCC----CcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 93 TINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSENN----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 93 Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
|||+||....... .++....+++|+.++.++++++...- .++|++||...+....
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~----------------- 138 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA----------------- 138 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT-----------------
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC-----------------
Confidence 9999997653322 22345577899999999988775432 4899999987653321
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
+...|+.+|...+.+.+.++.+. |+++..++||.+..+...
T Consensus 139 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------------- 182 (230)
T 3guy_A 139 ----------------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE-------------------- 182 (230)
T ss_dssp ----------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------
T ss_pred ----------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH--------------------
Confidence 33479999999999999887664 799999999988765322
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
.... ......++.++|+|++++.++..+
T Consensus 183 -~~~~---------~~~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 183 -TSGK---------SLDTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp --------------------CCCHHHHHHHHHHHCCEE
T ss_pred -hcCC---------CCCcccCCCHHHHHHHHHHHHhCc
Confidence 0000 011335788999999999998864
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.1e-20 Score=162.03 Aligned_cols=202 Identities=11% Similarity=0.069 Sum_probs=151.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
++|+||||||+|+||++++++|+++ |++|++++|++.... ....++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5689999999999999999999999 999999999865422 235678899999998888775
Q ss_pred --cccEEEEeccccCCccc-----cCChhHHHHHhhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADY-----NTRPLDTIYSNFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|+|||+||....... .++....+++|+.++.++++++... +.++|++||...+....
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 142 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------- 142 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC-----------
Confidence 58999999997643221 2234567789999999999988654 26999999987654321
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+-.+.
T Consensus 143 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-------------- 186 (241)
T 1dhr_A 143 ----------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------------- 186 (241)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH--------------
T ss_pred ----------------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc--------------
Confidence 2347999999999999998765 35999999999885542
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... ..... ....++..+|+|++++.++.... ...|+.+++.++
T Consensus 187 ---~~~----~~~~~---------~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~ 230 (241)
T 1dhr_A 187 ---NRK----SMPEA---------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTT 230 (241)
T ss_dssp ---HHH----HSTTS---------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEE
T ss_pred ---ccc----cCcch---------hhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCC
Confidence 111 11111 11235778999999999987643 245788888775
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-20 Score=162.48 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=152.9
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC--CChhHHHHhhc
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI--KHDSRLEGLIK 88 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~--~d~~~~~~~~~ 88 (390)
....+++|+||||||+|+||++++++|+++ |++|++++|+......+...........+.++.+|+ .+.+++.++++
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence 334678899999999999999999999999 999999999876655443322221224677788877 88888877765
Q ss_pred -------cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCC
Q 016370 89 -------MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~ 151 (390)
++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 161 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR----- 161 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC-----
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC-----
Confidence 5899999999753211 12345567889999999998887 4445 799999997654321
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh----cCccEEEeecceecCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
.+...|+.+|...+.+.+.++.+ .++++.+++||.+..+
T Consensus 162 ----------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~--------- 204 (247)
T 3i1j_A 162 ----------------------------ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG--------- 204 (247)
T ss_dssp ----------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------
T ss_pred ----------------------------CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------
Confidence 13347999999999999887755 4789999999877543
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEe
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNV 289 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv 289 (390)
+.. ...... ....+...+|+|++++.++.... ...|+.+++
T Consensus 205 --------~~~----~~~~~~---------~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 205 --------MRA----QAYPDE---------NPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp --------HHH----HHSTTS---------CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred --------cch----hccccc---------CccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 111 111111 11235668999999999986532 235666664
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=166.45 Aligned_cols=208 Identities=17% Similarity=0.179 Sum_probs=135.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHH---HHhh---c
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL---EGLI---K 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~---~~~~---~ 88 (390)
+++|+||||||+|+||++++++|.+ |+.|++++|++.....+.. ..++.++.+|+.+.+.. .+.+ .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~--g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR--DHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 4678999999999999999999975 7899999998776655443 24788999999887442 2222 2
Q ss_pred cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
++|+|||+||........ ++....+++|+.++.++++++. +.+.++|++||...+....
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 141 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP------------- 141 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC-------------
Confidence 489999999987543222 2344667899999888777663 3347899999987665321
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~ 237 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+.++... .+.
T Consensus 142 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------------~~~ 188 (245)
T 3e9n_A 142 --------------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ-------------GLM 188 (245)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------
T ss_pred --------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh-------------hhh
Confidence 2347999999999999888765 5899999999999887432 111
Q ss_pred HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
... + .......+++++|+|++++.++..+. .+.+||+.=
T Consensus 189 ----~~~--~-------~~~~~~~~~~p~dvA~~i~~l~~~~~--~~~~~~i~~ 227 (245)
T 3e9n_A 189 ----DSQ--G-------TNFRPEIYIEPKEIANAIRFVIDAGE--TTQITNVDV 227 (245)
T ss_dssp --------------------CCGGGSCHHHHHHHHHHHHTSCT--TEEEEEEEE
T ss_pred ----hhh--h-------cccccccCCCHHHHHHHHHHHHcCCC--ccceeeeEE
Confidence 000 0 01112347899999999999999874 567888763
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.6e-20 Score=164.05 Aligned_cols=225 Identities=11% Similarity=-0.023 Sum_probs=160.8
Q ss_pred CCCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhcc-
Q 016370 14 PIKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM- 89 (390)
Q Consensus 14 ~~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~- 89 (390)
.+++|+||||||+ |.||.+++++|+++ |++|++++|+.... .............++.++.+|++|.++++++++.
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEM-GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHT-SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 4678999999999 99999999999999 99999998876433 2111111111135788999999999998887763
Q ss_pred ------ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCC
Q 016370 90 ------ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 90 ------~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 168 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF------- 168 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS-------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC-------
Confidence 799999999875432 22344567889999999998877 4444 7999999976543210
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcC--ccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG--LEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
+.+...|+.+|...+.+.+.++.+.+ +++..+.||.+..+...
T Consensus 169 ------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~----------- 213 (267)
T 3gdg_A 169 ------------------------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD----------- 213 (267)
T ss_dssp ------------------------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG-----------
T ss_pred ------------------------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh-----------
Confidence 01334799999999999998887664 78999999998766432
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.............. ....+.+++|+|++++.++... ....|+.+++.+|
T Consensus 214 --~~~~~~~~~~~~~~---------~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG 263 (267)
T 3gdg_A 214 --FVPKETQQLWHSMI---------PMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGG 263 (267)
T ss_dssp --GSCHHHHHHHHTTS---------TTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred --hCCHHHHHHHHhcC---------CCCCCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence 11112222222222 2234678999999999998753 2346899999986
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=161.39 Aligned_cols=202 Identities=12% Similarity=0.097 Sum_probs=146.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC--CCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT--GADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
+.+|++|||||+|.||.+++++|.++ |++|++++|+.+............ ....+.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999 999999999876654433221110 12578899999999998888776
Q ss_pred ---cccEEEEeccccCCcccc---CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|+|||+||........ ++....+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF----------- 152 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-----------
Confidence 489999999986433222 234467789999999988877 3344 799999997543211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.+...|+.+|...+.+.+.++.+. |+++.+++||.+..+.
T Consensus 153 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~--------------- 195 (250)
T 3nyw_A 153 ----------------------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM--------------- 195 (250)
T ss_dssp ----------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH---------------
T ss_pred ----------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch---------------
Confidence 123479999999999988877654 8999999999886542
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
. ..... . .....++..+|+|++++.++..+.
T Consensus 196 --~----~~~~~--~-------~~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 196 --A----KKAGT--P-------FKDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp --H----HHTTC--C-------SCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred --h----hhcCC--C-------cccccCCCHHHHHHHHHHHHcCCC
Confidence 1 11111 1 112347899999999999998764
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-19 Score=159.83 Aligned_cols=223 Identities=12% Similarity=0.079 Sum_probs=158.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
+++|+||||||+|.||++++++|+++ |++|+++ .|+............. ....+.++.+|++|.+.++.+++.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLAND-GALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCSHHHHHHHHHHHH-TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchHHHHHHHHHHHh-cCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999 9999886 4554433332211111 235788899999999888777653
Q ss_pred ---------ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC--C-CcEEEeecccccccccCCCCCC
Q 016370 90 ---------ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN--N-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 90 ---------~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~--~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
+|+|||+||........ ++....+++|+.++.++++++... + .++|++||...+....
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------ 156 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP------ 156 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT------
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC------
Confidence 89999999986433222 233456789999999999988765 2 6899999976653321
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+ .++++.+++|+.+..+....
T Consensus 157 ---------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------- 201 (255)
T 3icc_A 157 ---------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAE-------- 201 (255)
T ss_dssp ---------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTT--------
T ss_pred ---------------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhh--------
Confidence 2347999999999999888765 48999999999998875431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.... ..+........+ ...+..++|+|+++..++... ....|+++++.+|
T Consensus 202 -~~~~--~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (255)
T 3icc_A 202 -LLSD--PMMKQYATTISA---------FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 252 (255)
T ss_dssp -TTTS--HHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred -hccc--HHHHHhhhccCC---------cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence 0000 111111122211 224667999999999988643 2256899999986
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=165.07 Aligned_cols=215 Identities=12% Similarity=0.105 Sum_probs=152.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc-------ccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL-------LEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
+++|++|||||+|.||++++++|.++ |++|++++|+......+ .... .....++.++.+|++|.+++.+++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAAD-GANVALVAKSAEPHPKLPGTIYTAAKEI-EEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHH-HHHTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECChhhhhhhhHHHHHHHHHH-HhcCCcEEEEECCCCCHHHHHHHH
Confidence 56789999999999999999999999 99999999987642221 0000 001357889999999999988887
Q ss_pred c-------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCC
Q 016370 88 K-------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFL 151 (390)
Q Consensus 88 ~-------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~ 151 (390)
+ .+|++||+||........ ++....+++|+.++.++++++... + .++|++||...+....
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 160 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW---- 160 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC----
Confidence 6 589999999987543222 233456679999999999987544 4 7999999975443210
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.+...|+.+|...+.+.+.++.+ .|+++.+++|+.+...
T Consensus 161 ----------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t---------- 202 (285)
T 3sc4_A 161 ----------------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT---------- 202 (285)
T ss_dssp ----------------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC----------
T ss_pred ----------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc----------
Confidence 02347999999999999888765 5899999999843221
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.+.. ....... ....+...+|+|++++.++.......|+.+.+.+
T Consensus 203 ------~~~~----~~~~~~~--------~~~r~~~pedvA~~~~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 203 ------AAVQ----NLLGGDE--------AMARSRKPEVYADAAYVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp ------HHHH----HHHTSCC--------CCTTCBCTHHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred ------HHHH----hhccccc--------cccCCCCHHHHHHHHHHHhCCcccccceEEEEcC
Confidence 1221 1111111 1123567899999999999876434455555544
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=164.64 Aligned_cols=222 Identities=16% Similarity=0.126 Sum_probs=156.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCCCCCeeEEeCCCCChh-----------
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHDS----------- 81 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~----------- 81 (390)
.+++|++|||||+|.||+++++.|+++ |++|++++ |+.+....+..........++.++.+|++|.+
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 467889999999999999999999999 99999999 87655443322111001347889999999988
Q ss_pred ------HHHHhhc-------cccEEEEeccccCCccc------------------cCChhHHHHHhhhhHHHHHHHHHh-
Q 016370 82 ------RLEGLIK-------MADLTINLAAICTPADY------------------NTRPLDTIYSNFIDALPVVKYCSE- 129 (390)
Q Consensus 82 ------~~~~~~~-------~~d~Vih~a~~~~~~~~------------------~~~~~~~~~~nv~~~~~l~~~~~~- 129 (390)
++.++++ .+|+|||+||....... .++....+++|+.++.++++++..
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 8887776 58999999997643221 223345778999999999887742
Q ss_pred ---C-------CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHH
Q 016370 130 ---N-------NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199 (390)
Q Consensus 130 ---~-------~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 199 (390)
. +.++|++||...+.... ....|+.+|...+.+.+.+
T Consensus 165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------------------------~~~~Y~asKaa~~~l~~~l 211 (291)
T 1e7w_A 165 VAGTPAKHRGTNYSIINMVDAMTNQPLL---------------------------------GYTIYTMAKGALEGLTRSA 211 (291)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTSCCT---------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCcEEEEEechhhcCCCC---------------------------------CCchhHHHHHHHHHHHHHH
Confidence 2 25899999976553321 2347999999999998887
Q ss_pred hhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHH
Q 016370 200 GAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMI 276 (390)
Q Consensus 200 ~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l 276 (390)
+.+ .|+++.+++|+.+..+. . .. ...........|+ + .-+...+|+|++++.++
T Consensus 212 a~e~~~~gI~vn~v~PG~v~T~~-~-----------~~---~~~~~~~~~~~p~-----~---~r~~~pedvA~~v~~l~ 268 (291)
T 1e7w_A 212 ALELAPLQIRVNGVGPGLSVLVD-D-----------MP---PAVWEGHRSKVPL-----Y---QRDSSAAEVSDVVIFLC 268 (291)
T ss_dssp HHHHGGGTEEEEEEEESSBCCGG-G-----------SC---HHHHHHHHTTCTT-----T---TSCBCHHHHHHHHHHHH
T ss_pred HHHHHhcCeEEEEEeeCCccCCc-c-----------CC---HHHHHHHHhhCCC-----C---CCCCCHHHHHHHHHHHh
Confidence 655 48999999999886553 1 00 1112222222221 0 02567999999999998
Q ss_pred hCCC-CCCCceEEecCC
Q 016370 277 ENPA-RANGHIFNVGNP 292 (390)
Q Consensus 277 ~~~~-~~~~~~~nv~~~ 292 (390)
.... ...|+.+++.+|
T Consensus 269 s~~~~~itG~~i~vdGG 285 (291)
T 1e7w_A 269 SSKAKYITGTCVKVDGG 285 (291)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CCcccCccCcEEEECCC
Confidence 7532 246789999886
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=165.20 Aligned_cols=225 Identities=12% Similarity=0.043 Sum_probs=151.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHh---hCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILL---ETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~---~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
++++|++|||||+|+||++++++|++ + |++|++++|+.+....+....... ...++.++.+|++|.+++.++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSP-GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCT-TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcC-CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 46788999999999999999999999 6 999999999876554332211100 02468899999999988877764
Q ss_pred --------ccc--EEEEeccccCC--c-----cccCChhHHHHHhhhhHHHHHHHHHhC------C-CcEEEeecccccc
Q 016370 89 --------MAD--LTINLAAICTP--A-----DYNTRPLDTIYSNFIDALPVVKYCSEN------N-KRLIHFSTCEVYG 144 (390)
Q Consensus 89 --------~~d--~Vih~a~~~~~--~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~------~-~~~v~~Ss~~vy~ 144 (390)
.+| +|||+||.... . ...++....+++|+.++.++++++... + .++|++||...+.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence 258 99999997642 1 122345567889999999999988543 2 5699999987653
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFI 223 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~ 223 (390)
... +...|+.+|...+.+.+.++.+. ++++.++.||.+-.+.
T Consensus 162 ~~~---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~---- 204 (259)
T 1oaa_A 162 PYK---------------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM---- 204 (259)
T ss_dssp CCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH----
T ss_pred CCC---------------------------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch----
Confidence 211 33479999999999999988776 4888888888774431
Q ss_pred CCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEe
Q 016370 224 PGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289 (390)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv 289 (390)
...+.....................+...+|+|++++.++.......|+.+++
T Consensus 205 -------------~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v 257 (259)
T 1oaa_A 205 -------------QQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp -------------HHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred -------------HHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence 11111000000000000000011236789999999999987543345666654
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-19 Score=160.90 Aligned_cols=228 Identities=12% Similarity=0.064 Sum_probs=157.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||+|.||++++++|.++ |++|++++|+......+... ...++.++.+|++|.+++.++++
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVA----HGGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHH----cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999999 99999999987665544332 23578999999999998887776
Q ss_pred -cccEEEEeccccCCcccc---------CChhHHHHHhhhhHHHHHHHHHhC----CCcEEEeecccccccccCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN---------TRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~---------~~~~~~~~~nv~~~~~l~~~~~~~----~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||........ ++....+++|+.++.++++++... +.++|++||...+....
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 150 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG------- 150 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS-------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC-------
Confidence 379999999986422111 123456779999999998877542 36999999976543221
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+. ++++..+.||.+..+....... ..+...
T Consensus 151 --------------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~-~~~~~~ 203 (281)
T 3zv4_A 151 --------------------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSL-GLSEQS 203 (281)
T ss_dssp --------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTC-C-----
T ss_pred --------------------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccc-cccccc
Confidence 23479999999999999887664 3899999999998774321000 000000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC-CC-CCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PA-RANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~-~~-~~~~~~~nv~~~ 292 (390)
... ..+........| ...+...+|+|++++.++.. .. ...|+++++.+|
T Consensus 204 ~~~--~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG 254 (281)
T 3zv4_A 204 ISS--VPLADMLKSVLP---------IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG 254 (281)
T ss_dssp -----CCHHHHHHHTCT---------TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred ccc--hhHHHHHHhcCC---------CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence 000 001111222222 12366789999999999973 22 247899999986
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=8.4e-19 Score=157.72 Aligned_cols=231 Identities=11% Similarity=0.057 Sum_probs=155.8
Q ss_pred CCCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 14 PIKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 14 ~~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
.+++|+|||||| +|.||++++++|.++ |++|++++|+.... ..+... ...++.++.+|++|.++++++++
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDR----LPAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTT----SSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHh----cCCCceEEEccCCCHHHHHHHHHHH
Confidence 467789999999 999999999999999 99999999987542 333221 12467889999999998888876
Q ss_pred --------cccEEEEeccccCC-----cc----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccC
Q 016370 89 --------MADLTINLAAICTP-----AD----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIG 148 (390)
Q Consensus 89 --------~~d~Vih~a~~~~~-----~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~ 148 (390)
.+|+|||+||.... .. ..++....+++|+.++.++++++...- .++|++||...++..
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~-- 156 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP-- 156 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT--
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC--
Confidence 78999999997641 11 122344577899999999999886542 589999986542211
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPG 225 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~ 225 (390)
..+.|+.+|...+.+.+.++.+ .|+++.+++|+.+..+.......
T Consensus 157 --------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~ 204 (269)
T 2h7i_A 157 --------------------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVG 204 (269)
T ss_dssp --------------------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHT
T ss_pred --------------------------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccc
Confidence 2347999999999999887655 48999999999886542110000
Q ss_pred CCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.............+........|+ .+.+...+|+|++++.++.... ...|+.+++.+|
T Consensus 205 -~~~~~~~~~~~~~~~~~~~~~~p~--------~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 263 (269)
T 2h7i_A 205 -GALGEEAGAQIQLLEEGWDQRAPI--------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263 (269)
T ss_dssp -TTTCHHHHHHHHHHHHHHHHHCTT--------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred -ccchhhHHHHHHHHHHhhhccCCc--------ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence 000000000000011111111111 0125568999999999997532 246788999886
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-19 Score=163.77 Aligned_cols=217 Identities=14% Similarity=0.136 Sum_probs=153.9
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccc------cccCCCCCeeEEeCCCCChhHHHHh
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP------ESQTGADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~i~~~~~D~~d~~~~~~~ 86 (390)
..+++|+||||||+|.||.+++++|.++ |++|++++|+......+... .......++.++.+|++|.+++.++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKD-GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHC-CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 4577899999999999999999999999 99999999987643221100 0001235788999999999998888
Q ss_pred hc-------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCC
Q 016370 87 IK-------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSF 150 (390)
Q Consensus 87 ~~-------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~ 150 (390)
++ ++|+|||+||........ ++....+++|+.++.++++++ ++.+ .+||++||...+.....
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~-- 197 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF-- 197 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT--
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC--
Confidence 76 589999999987533222 234567889999999999887 4444 79999999765533100
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCC
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
.+...|+.+|...+.+.+.++.+. ++++.++.|+.+...
T Consensus 198 -----------------------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T---------- 238 (346)
T 3kvo_A 198 -----------------------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT---------- 238 (346)
T ss_dssp -----------------------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC----------
T ss_pred -----------------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc----------
Confidence 133479999999999998887664 789999999854332
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.+. ..+.... ....+...+|+|++++.++.......|+.+ +.+
T Consensus 239 ------~~~----~~~~~~~---------~~~r~~~pedvA~~v~~L~s~~~~itG~~i-vdg 281 (346)
T 3kvo_A 239 ------AAM----DMLGGPG---------IESQCRKVDIIADAAYSIFQKPKSFTGNFV-IDE 281 (346)
T ss_dssp ------HHH----HHHCC-----------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEE-EHH
T ss_pred ------HHH----Hhhcccc---------ccccCCCHHHHHHHHHHHHhcCCCCCceEE-ECC
Confidence 121 1111111 122356789999999999987433456655 554
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=160.47 Aligned_cols=239 Identities=12% Similarity=0.081 Sum_probs=152.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh-hHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD-SRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~-~~~~~~~~---- 88 (390)
.+++|+||||||+|+||.+++++|+++ |++|++++|+.................++.++.+|++|. +.+..+++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 356789999999999999999999999 999999999886654433222222335799999999998 77766654
Q ss_pred ---cccEEEEeccccCCc----------------------------------cccCChhHHHHHhhhhHHHHHHHHH---
Q 016370 89 ---MADLTINLAAICTPA----------------------------------DYNTRPLDTIYSNFIDALPVVKYCS--- 128 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~----------------------------------~~~~~~~~~~~~nv~~~~~l~~~~~--- 128 (390)
.+|+|||+||..... ...+.....+++|+.++.++++++.
T Consensus 88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l 167 (311)
T 3o26_A 88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL 167 (311)
T ss_dssp HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence 599999999986421 0112334568899999888887763
Q ss_pred -hCC-CcEEEeecccccccccCCC-----CCCCCCCCCCccccc------cccCCCCcccCCCCCCCchhHHHHHHHHHH
Q 016370 129 -ENN-KRLIHFSTCEVYGKTIGSF-----LPKDSPLRQDPAYYV------LKEDASPCIFGSIEKQRWSYACAKQLIERL 195 (390)
Q Consensus 129 -~~~-~~~v~~Ss~~vy~~~~~~~-----~~e~~~~~~~~~~~~------~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~ 195 (390)
+.+ .++|++||...+....... +.+....... .... .............+.+...|+.+|.+.+.+
T Consensus 168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 246 (311)
T 3o26_A 168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEE-RIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246 (311)
T ss_dssp TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHH-HHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEecCCcccccccchhhhhhhccccccchh-HHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence 344 7999999976543221000 0000000000 0000 000000000001112446799999999999
Q ss_pred HHHHhhhc-CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHH
Q 016370 196 IYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLL 274 (390)
Q Consensus 196 ~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 274 (390)
.+.++.+. ++++.++.||.|..+... + ......++.++.++.
T Consensus 247 ~~~la~e~~~i~v~~v~PG~v~T~~~~-------------------------~------------~~~~~~~~~a~~~~~ 289 (311)
T 3o26_A 247 TRVLANKIPKFQVNCVCPGLVKTEMNY-------------------------G------------IGNYTAEEGAEHVVR 289 (311)
T ss_dssp HHHHHHHCTTSEEEEECCCSBCSGGGT-------------------------T------------CCSBCHHHHHHHHHH
T ss_pred HHHHHhhcCCceEEEecCCceecCCcC-------------------------C------------CCCCCHHHHHHHHHH
Confidence 99998776 689999999988765321 0 011458899999999
Q ss_pred HHhCCCCCCCceEEecC
Q 016370 275 MIENPARANGHIFNVGN 291 (390)
Q Consensus 275 ~l~~~~~~~~~~~nv~~ 291 (390)
++..++...++.|...+
T Consensus 290 ~~~~~~~~~~g~~~~~s 306 (311)
T 3o26_A 290 IALFPDDGPSGFFYDCS 306 (311)
T ss_dssp HHTCCSSCCCSCEETC-
T ss_pred HHhCCCCCCCceEeccc
Confidence 98876544555565555
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-19 Score=157.76 Aligned_cols=221 Identities=10% Similarity=0.047 Sum_probs=145.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHH-Hh---hccccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLE-GL---IKMADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~-~~---~~~~d~ 92 (390)
||+||||||+|+||++++++|+++ |++|++++|+.+....+.... . ....+..+ |..+.+.+- .+ +.++|+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~-~-~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFA-E-TYPQLKPM--SEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHH-H-HCTTSEEC--CCCSHHHHHHHHHHHHSCCCE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHH-h-cCCcEEEE--CHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999 999999999876544332110 0 01223332 444433222 11 225999
Q ss_pred EEEecccc-CCcc----ccCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 93 TINLAAIC-TPAD----YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 93 Vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
|||+||.. .... ..++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------- 140 (254)
T 1zmt_A 76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK--------------- 140 (254)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT---------------
T ss_pred EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC---------------
Confidence 99999976 3211 122345678899999999888763 334 7999999976653211
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH--
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL-- 237 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-- 237 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.++||.... ...+.+.
T Consensus 141 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~--------~~~T~~~~~ 194 (254)
T 1zmt_A 141 ------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPY--------FYPTEPWKT 194 (254)
T ss_dssp ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCS--------SCBHHHHTT
T ss_pred ------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc--------cCCCccccc
Confidence 2347999999999999887655 48999999999999886431 0011111
Q ss_pred -HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 238 -ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
...........+ ...+...+|+|++++.++.... ...|+.+++.++
T Consensus 195 ~~~~~~~~~~~~p---------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG 242 (254)
T 1zmt_A 195 NPEHVAHVKKVTA---------LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 242 (254)
T ss_dssp CHHHHHHHHHHSS---------SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred ChHHHHHHhccCC---------CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 011111111111 1136789999999999987643 246789999886
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-18 Score=149.13 Aligned_cols=218 Identities=16% Similarity=0.163 Sum_probs=158.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---c
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---A 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~ 90 (390)
.+.+|++|||||++-||+.+++.|.++ |++|++++|+.+...... ..++..+.+|++|+++++++++. +
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGVHAPR-------HPRIRREELDITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTSTTSCC-------CTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHhhhh-------cCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence 468999999999999999999999999 999999999876554322 35789999999999999888874 8
Q ss_pred cEEEEeccccCCcc--ccCChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 91 DLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 91 d~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
|++||+||...+.. ..++....+++|+.++..+.+++. +.+.++|++||..-.....
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~----------------- 142 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA----------------- 142 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS-----------------
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC-----------------
Confidence 99999999875321 112345577899999887777653 3346899999975432211
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
....|+.+|.....+.+.++.+ +|+++..+-||.+--|..... ... ....
T Consensus 143 ----------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~-------~~~----~~~~ 195 (242)
T 4b79_A 143 ----------------DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL-------KAD----VEAT 195 (242)
T ss_dssp ----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC------------CCC----HHHH
T ss_pred ----------------CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc-------cCC----HHHH
Confidence 2237999999999988887654 489999999999977643210 000 1223
Q ss_pred HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..+....|+.. +-..+|+|.+++.++.... ...|+.+.|.+|
T Consensus 196 ~~~~~~~PlgR---------~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 196 RRIMQRTPLAR---------WGEAPEVASAAAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp HHHHHTCTTCS---------CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHhcCCCCC---------CcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence 33444444322 3458999999999886432 256889999886
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.6e-19 Score=157.23 Aligned_cols=170 Identities=12% Similarity=0.050 Sum_probs=125.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+|++|++|||||+|+||+++++.|+++ |++|++++|+.+....+...... ...++.++.+|++|.+++..+++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVVAQEAQS-LGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-HSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHH-cCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 367789999999999999999999999 99999999987654433221100 12468889999999988877654
Q ss_pred ---cccEEEEecc--cc------CCc---cccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCC
Q 016370 89 ---MADLTINLAA--IC------TPA---DYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 89 ---~~d~Vih~a~--~~------~~~---~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~ 149 (390)
.+|+|||+|| .. ... ...++....+++|+.++.++.+++ .+.+ .++|++||...+...
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 156 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM--- 156 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC---
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC---
Confidence 3699999994 32 111 112234466778988887666554 3445 899999997664321
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~ 219 (390)
+...|+.+|...+.+.+.++.+ .|+++++++||.+..+.
T Consensus 157 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 157 -------------------------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -------------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -------------------------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 2347999999999999887654 58999999999998775
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=153.79 Aligned_cols=211 Identities=12% Similarity=0.083 Sum_probs=147.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccc------ccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE------SQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
+++|++|||||+|.||++++++|.++ |++|++++|+......+.... ......++.++.+|++|.+++.++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARD-GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 57789999999999999999999999 999999999875432211100 00013468899999999998888776
Q ss_pred -------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCC
Q 016370 89 -------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
.+|++||+||........ ++....+++|+.++.++++++. +.+ .++|++||...+.....
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---- 158 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWW---- 158 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHH----
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC----
Confidence 489999999987543222 2334577799999999988764 344 79999999765433100
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
.+...|+.+|...+.+.+.++.+ .|+++.++.|+.+....
T Consensus 159 ---------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~---------- 201 (274)
T 3e03_A 159 ---------------------------GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD---------- 201 (274)
T ss_dssp ---------------------------HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------
T ss_pred ---------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc----------
Confidence 02347999999999999887755 47999999998533221
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceE
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIF 287 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~ 287 (390)
+. ....+. ....+...+|+|++++.++..... ..|+.+
T Consensus 202 ------~~-----~~~~~~---------~~~~~~~pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 202 ------AI-----NMLPGV---------DAAACRRPEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp -----------------CC---------CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred ------hh-----hhcccc---------cccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence 11 001111 112266799999999999986432 345555
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-17 Score=145.41 Aligned_cols=209 Identities=15% Similarity=0.159 Sum_probs=154.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
|+||||||++-||+.+++.|.++ |++|++++|++.....+.+. ..++..+.+|++|+++++++++ ++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKE-----RPNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTT-----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh-----cCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 78999999999999999999999 99999999988766554432 3578899999999998888775 38
Q ss_pred cEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 91 DLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
|++||+||........ ++....+++|+.++..+.+++. +.+.++|++||...+....
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~--------------- 141 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP--------------- 141 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC---------------
Confidence 9999999987543222 2345677799999888776653 3347999999976543221
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
....|+.+|.....+.+.++.+. ++++..+-||.+--+... .+..
T Consensus 142 ------------------~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-------------~~~~-- 188 (247)
T 3ged_A 142 ------------------DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-------------EFTQ-- 188 (247)
T ss_dssp ------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC----------------CCH--
T ss_pred ------------------CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-------------HHHH--
Confidence 22379999999998888876554 789999999988655322 1111
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
......|+. -+...+|+|.+++.++.. +...|+.+.|.+|
T Consensus 189 --~~~~~~Pl~---------R~g~pediA~~v~fL~s~-~~iTG~~i~VDGG 228 (247)
T 3ged_A 189 --EDCAAIPAG---------KVGTPKDISNMVLFLCQQ-DFITGETIIVDGG 228 (247)
T ss_dssp --HHHHTSTTS---------SCBCHHHHHHHHHHHHHC-SSCCSCEEEESTT
T ss_pred --HHHhcCCCC---------CCcCHHHHHHHHHHHHhC-CCCCCCeEEECcC
Confidence 222222221 144589999999999975 4567899999986
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7e-20 Score=169.29 Aligned_cols=172 Identities=16% Similarity=0.103 Sum_probs=125.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-------eEEEEecCCh--hhhcc-ccccccCCCCCeeEEeCCCCChhHHHHh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-------KILALDVYND--KIKHL-LEPESQTGADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-------~V~~~~r~~~--~~~~~-~~~~~~~~~~~i~~~~~D~~d~~~~~~~ 86 (390)
+|||+||||+||||++++..|+++ |+ +|+++++.+. ..... .+.. ...+.++ +|+.+.+++.++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~-g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~----~~~~~~~-~di~~~~~~~~a 77 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG-EMLGKDQPVILQLLEIPQAMKALEGVVMELE----DCAFPLL-AGLEATDDPKVA 77 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCGGGHHHHHHHHHHHH----TTTCTTE-EEEEEESCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCCCCCCCEEEEEeCCCchhhccchhhhhh----ccccccc-CCeEeccChHHH
Confidence 479999999999999999999997 75 8999998642 11110 0100 0112233 577777778888
Q ss_pred hccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeeccc-ccccccCCCCCCCCCCCCCcc
Q 016370 87 IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCE-VYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 87 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~-vy~~~~~~~~~e~~~~~~~~~ 162 (390)
++++|+|||+||..... ..++...++.|+.++.++++++++.+ .+++++|+.. +... ...+..+
T Consensus 78 ~~~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~----~~~~~~~------ 145 (327)
T 1y7t_A 78 FKDADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL----IAYKNAP------ 145 (327)
T ss_dssp TTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCT------
T ss_pred hCCCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH----HHHHHcC------
Confidence 99999999999987532 35677889999999999999999873 4778777642 1100 0001110
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCC
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 221 (390)
...|.+.|+.+|+..|++...+++..|++.+++|++++|||+..
T Consensus 146 ---------------~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 146 ---------------GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp ---------------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred ---------------CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 01255679999999999999998888999999999999998754
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-17 Score=146.12 Aligned_cols=226 Identities=14% Similarity=0.137 Sum_probs=157.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||++-||+.+++.|.++ |++|++++|+++..+...+.... ...++..+.+|++|+++++++++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRG-MGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999988765544332211 24578899999999999988775
Q ss_pred --cccEEEEeccccCC-ccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTP-ADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~-~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|++||+||.... ... .++....+++|+.++..+++++ ++.+ .++|++||..-+....
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~--------- 152 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF--------- 152 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS---------
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC---------
Confidence 38999999997642 111 2234567779999988777655 3444 7999999975432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|.....+.+.++.+ +|+++..+-||.|-.|..... ....
T Consensus 153 ------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~------~~~~ 202 (254)
T 4fn4_A 153 ------------------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS------SKPS 202 (254)
T ss_dssp ------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC------SSCC
T ss_pred ------------------------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc------cCCc
Confidence 2237999999999888877655 489999999999876643210 0001
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......+.... .+.. -+-..+|+|.+++.++.... ...|+.+.|.+|
T Consensus 203 ~~~~~~~~~~~---~~~~---------R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG 250 (254)
T 4fn4_A 203 ELGMRTLTKLM---SLSS---------RLAEPEDIANVIVFLASDEASFVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHHHHHHH---TTCC---------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhcC---CCCC---------CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence 11111111111 1111 13458999999999886532 246889999886
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-17 Score=147.01 Aligned_cols=227 Identities=13% Similarity=0.047 Sum_probs=160.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
.++++|.+|||||++-||+.+++.|.++ |++|++++|+.+......+. ...++..+.+|++|+++++++++.
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~----~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAE----IGGGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----HCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----cCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 3578899999999999999999999999 99999999998766554332 235778899999999998887763
Q ss_pred ----ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|++||+||........ ++....+++|+.++..+++++...- .++|++||...+....
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~----------- 168 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP----------- 168 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT-----------
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC-----------
Confidence 89999999987543222 3445677799999999988875442 6899999875432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|.....+.+.++.+. |+++..+-||.+-.|..... ....+.
T Consensus 169 ----------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~------~~~~~~ 220 (273)
T 4fgs_A 169 ----------------------AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL------AGKDPV 220 (273)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------------CHH
T ss_pred ----------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHh------hccCch
Confidence 22379999999999888877554 79999999999876643200 000011
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.-..+...+....|+.. +-..+|+|.+++.++.... ...|+.+.|.+|
T Consensus 221 ~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG 269 (273)
T 4fgs_A 221 QQQGLLNALAAQVPMGR---------VGRAEEVAAAALFLASDDSSFVTGAELFVDGG 269 (273)
T ss_dssp HHHHHHHHHHHHSTTSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence 11223333333333322 3458999999999886532 256889999886
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.9e-18 Score=163.25 Aligned_cols=202 Identities=14% Similarity=0.134 Sum_probs=145.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhh---hccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKI---KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~---~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
.+++||||||+|+||.+++++|.++ |++ |++++|+.... ..+.... .....++.++.+|++|.+++..++.+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~-G~~~vvl~~R~~~~~~~~~~l~~~l-~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRSGPDADGAGELVAEL-EALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESSGGGSTTHHHHHHHH-HHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCCEEEEEcCCCCCcHHHHHHHHHH-HhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 4579999999999999999999999 885 88999976421 1111100 00235789999999999999999876
Q ss_pred ----ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccc-cccccCCCCCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEV-YGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~v-y~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||...... ...+....++.|+.++.++++++...+ .+||++||... +|..
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------- 369 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------- 369 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-------------
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC-------------
Confidence 499999999875321 122344566789999999999999888 99999999644 4332
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
....|+.+|...+.+.+.+. ..|+++++++|+.+++++.. ..
T Consensus 370 ---------------------g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~----------------~~ 411 (486)
T 2fr1_A 370 ---------------------GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMA----------------EG 411 (486)
T ss_dssp ---------------------TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-----------------------
T ss_pred ---------------------CCHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCccc----------------ch
Confidence 12369999999998877664 46999999999999876422 00
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.. . ... ......+++.+|+++++..++....
T Consensus 412 ~~---~-----~~~--~~~g~~~i~~e~~a~~l~~~l~~~~ 442 (486)
T 2fr1_A 412 PV---A-----DRF--RRHGVIEMPPETACRALQNALDRAE 442 (486)
T ss_dssp -------------C--TTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred hH---H-----HHH--HhcCCCCCCHHHHHHHHHHHHhCCC
Confidence 00 0 001 1123568999999999999999753
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-17 Score=146.57 Aligned_cols=225 Identities=10% Similarity=0.008 Sum_probs=157.9
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++|||||+| -||..+++.|.++ |++|++.+|++...+.+.+........++.++.+|++|++++.++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46889999999987 7999999999999 99999999987665544333222234578899999999998887775
Q ss_pred ----cccEEEEeccccCCccc----cC----ChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPADY----NT----RPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~----~~----~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|++||+||....... .+ +....+++|+.++..+..++...- .++|++||..-....
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~------- 154 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV------- 154 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC-------
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc-------
Confidence 38999999997643211 11 122345678888887777665433 589999996532211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|....
T Consensus 155 --------------------------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~-------- 200 (256)
T 4fs3_A 155 --------------------------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKG-------- 200 (256)
T ss_dssp --------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT--------
T ss_pred --------------------------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhh--------
Confidence 02347999999999888887654 48999999999887664331
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. .-...+...+....|+.. +...+|+|++++.++.... ...|+++.|.+|
T Consensus 201 --~-~~~~~~~~~~~~~~Pl~R---------~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 201 --V-GGFNTILKEIKERAPLKR---------NVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp --C-TTHHHHHHHHHHHSTTSS---------CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --c-cCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 0 112233334444333321 3458999999999886432 246889999886
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=146.50 Aligned_cols=213 Identities=11% Similarity=0.061 Sum_probs=143.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-e--cCChhhhccccccccCCCCCeeEEeCCCCChhHH-HHhh---cc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILAL-D--VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL-EGLI---KM 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~-~~~~---~~ 89 (390)
+|++|||||+|+||+++++.|+++ |++|+++ + |+++....+.... .+.++. |..+.+.+ +.+. .+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~r~~~~~~~~~~~~-----~~~~~~--~~~~v~~~~~~~~~~~g~ 72 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQD-GYTVVCHDASFADAAERQRFESEN-----PGTIAL--AEQKPERLVDATLQHGEA 72 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHS-----TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCcCCHHHHHHHHHHh-----CCCccc--CHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999 9999999 6 8776554433211 122222 44443322 2222 24
Q ss_pred ccEEEEeccccCC---ccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ADLTINLAAICTP---ADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ~d~Vih~a~~~~~---~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+||.... ... .++....+++|+.++.++++++. +.+ .++|++||...+....
T Consensus 73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------- 142 (244)
T 1zmo_A 73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA---------- 142 (244)
T ss_dssp EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT----------
T ss_pred CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC----------
Confidence 8999999997643 211 22345678899999999888774 444 7999999987654321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCC---CCCCCCCCCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRM---DFIPGIDGPSE 231 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~---~~~~~~~~~~~ 231 (390)
+...|+.+|...+.+.+.++.+ .|+++++++|+.+-.+.. .
T Consensus 143 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------- 189 (244)
T 1zmo_A 143 -----------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTS---------- 189 (244)
T ss_dssp -----------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHH----------
T ss_pred -----------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccc----------
Confidence 2236999999999998887655 489999999999876642 1
Q ss_pred CchhhH-HHHHHHHhc-CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVL-ACFSNNLLR-RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+. ......... ..|. ..+...+|+|++++.++.... ...|+.+.+.+|
T Consensus 190 ---~~~~~~~~~~~~~~~~p~---------~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 190 ---DWENNPELRERVDRDVPL---------GRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp ---HHHHCHHHHHHHHHHCTT---------CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred ---cccchHHHHHHHhcCCCC---------CCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 110 011111111 1111 126679999999999987643 245788888875
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-18 Score=158.09 Aligned_cols=170 Identities=11% Similarity=0.082 Sum_probs=127.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-----cCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-----QTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
+|+||||||+|+||++++++|+++ |++|+++.|+............ .....++.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~-G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASD-PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTC-TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 578999999999999999999999 9998888876543322211100 00124788999999999999998875
Q ss_pred ---ccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~---------- 150 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP---------- 150 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC----------
Confidence 899999999764321 12234567889999999999875 3444 7999999976543211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCC
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~ 220 (390)
....|+.+|...+.+.+.++.+ .|+++++++|+.+..+..
T Consensus 151 -----------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 151 -----------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred -----------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 2237999999999999888764 689999999999987653
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=147.09 Aligned_cols=222 Identities=14% Similarity=0.153 Sum_probs=158.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++|++|||||++-||+.+++.|.++ |++|++.+|+++......+.... ...++..+.+|++|+++++++++.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTR-KGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHH-TTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999 99999999987665544322211 235788899999999998877763
Q ss_pred ---ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH-----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS-----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~-----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+|++||+||........ ++....+++|+.++..+++++. +.+ .++|++||...+....
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~--------- 154 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP--------- 154 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT---------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC---------
Confidence 89999999987543322 3445567789999888776552 223 7999999976543321
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|.....+.+.++.+ +|+++..+-||.+..|...
T Consensus 155 ------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~------------ 198 (255)
T 4g81_D 155 ------------------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT------------ 198 (255)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGH------------
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhh------------
Confidence 2237999999999888887654 4899999999998765322
Q ss_pred hhhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... ..+...+....|+.. +...+|+|.+++.++... +...|+.+.|.+|
T Consensus 199 -~~~~~~~~~~~~~~~~Pl~R---------~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 199 -ALIEDKQFDSWVKSSTPSQR---------WGRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp -HHHTCHHHHHHHHHHSTTCS---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -cccCCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 111 112222333333322 344789999999888543 2257889999886
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.9e-18 Score=155.21 Aligned_cols=207 Identities=17% Similarity=0.179 Sum_probs=144.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec---------CChhhhccccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV---------YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
+++|+||||||+|+||+++++.|.++ |++|+++++ +............. .+ ....+|+.+.+++..
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~-Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~---~~-~~~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRR---RG-GKAVANYDSVEAGEK 81 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH---TT-CEEEEECCCGGGHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCcccccccCCHHHHHHHHHHHHh---hC-CeEEEeCCCHHHHHH
Confidence 56789999999999999999999999 999999765 33332222111100 11 123579998877666
Q ss_pred hhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeeccc-ccccccC
Q 016370 86 LIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCE-VYGKTIG 148 (390)
Q Consensus 86 ~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~-vy~~~~~ 148 (390)
+++ .+|+|||+||...... ...+....+++|+.++.++++++ ++.+ .++|++||.. .++..
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-- 159 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-- 159 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC--
Confidence 543 4899999999875321 22345567889999988888776 3444 7999999964 34321
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPG 225 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~ 225 (390)
+...|+.+|...+.+.+.++.+ .|+++.+++|+.+ .+...
T Consensus 160 --------------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---- 202 (319)
T 1gz6_A 160 --------------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---- 202 (319)
T ss_dssp --------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG----
T ss_pred --------------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc----
Confidence 2237999999999998887655 4899999999876 32211
Q ss_pred CCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.... .....++..+|+|.+++.++..+....|+.|++.++
T Consensus 203 ---------~~~~------------------~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 203 ---------TVMP------------------EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp ---------GGSC------------------HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred ---------ccCC------------------hhhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 0000 011234578999999999987654446889999886
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=161.31 Aligned_cols=220 Identities=16% Similarity=0.159 Sum_probs=154.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhh---hccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKI---KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~---~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
.+++||||||+|+||.+++++|.++ |+ .|++++|+.... ..+..... ....++.++.+|++|.+++.+++.+
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~-G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAE-GAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT-TCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 4579999999999999999999988 88 588888876421 11111100 1234688999999999999999986
Q ss_pred ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhC-C-CcEEEeeccc-ccccccCCCCCCCCCCCCCcc
Q 016370 90 ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCE-VYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~v~~Ss~~-vy~~~~~~~~~e~~~~~~~~~ 162 (390)
+|+|||+||........ +.....++.|+.++.++.+++... + .+||++||.. ++|..
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~---------------- 399 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA---------------- 399 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT----------------
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC----------------
Confidence 99999999987543211 233456778999999999999877 6 8999999974 44432
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (390)
....|+.+|...|.+.+.+ +..|+++++++|+.+.+.+.. . .... .
T Consensus 400 ------------------g~~~YaaaKa~ld~la~~~-~~~gi~v~sv~pG~~~~tgm~---------~---~~~~---~ 445 (511)
T 2z5l_A 400 ------------------GQGAYAAANAALDALAERR-RAAGLPATSVAWGLWGGGGMA---------A---GAGE---E 445 (511)
T ss_dssp ------------------TBHHHHHHHHHHHHHHHHH-HTTTCCCEEEEECCBCSTTCC---------C---CHHH---H
T ss_pred ------------------CCHHHHHHHHHHHHHHHHH-HHcCCcEEEEECCcccCCccc---------c---cccH---H
Confidence 2247999999999998876 456999999999888432221 1 1111 1
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHH
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~ 306 (390)
.+. ......++.+|+++++..++..+. . .+.+.. +.+..+...+.
T Consensus 446 ~~~-----------~~g~~~l~~e~~a~~l~~al~~~~---~-~v~v~~----~d~~~~~~~~~ 490 (511)
T 2z5l_A 446 SLS-----------RRGLRAMDPDAAVDALLGAMGRND---V-CVTVVD----VDWERFAPATN 490 (511)
T ss_dssp HHH-----------HHTBCCBCHHHHHHHHHHHHHHTC---S-EEEECC----BCHHHHHHHHH
T ss_pred HHH-----------hcCCCCCCHHHHHHHHHHHHhCCC---C-EEEEEe----CCHHHHHhhhc
Confidence 111 112346889999999999998753 2 233333 44555555443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=158.31 Aligned_cols=217 Identities=17% Similarity=0.129 Sum_probs=152.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
++.++++|||||+|.||.++++.|.++ |++|++++|+.... ..... ..++.++.+|++|.+++..++.
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~-Ga~Vvl~~r~~~~~~l~~~~~------~~~~~~~~~Dvtd~~~v~~~~~~~~ 282 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARD-GATVVAIDVDGAAEDLKRVAD------KVGGTALTLDVTADDAVDKITAHVT 282 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHHH------HHTCEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHH------HcCCeEEEEecCCHHHHHHHHHHHH
Confidence 457889999999999999999999999 99999999865321 11111 1256789999999998887775
Q ss_pred ----c-ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhC----C-CcEEEeecccccccccCCCCCCC
Q 016370 89 ----M-ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ----~-~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
+ +|+|||+||....... .++....+++|+.++.++.+++... + .+||++||...+....
T Consensus 283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~------- 355 (454)
T 3u0b_A 283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR------- 355 (454)
T ss_dssp HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-------
T ss_pred HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-------
Confidence 3 8999999998754322 2234456789999999999988765 4 7999999976543221
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
....|+.+|...+.+.+.++.+ .|++++++.|+.+..+....
T Consensus 356 --------------------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--------- 400 (454)
T 3u0b_A 356 --------------------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA--------- 400 (454)
T ss_dssp --------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------
T ss_pred --------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh---------
Confidence 2347999999888888777644 48999999999998764320
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
......... ....+ ...+...+|+|+++..++.... ...|+++++.++
T Consensus 401 -~~~~~~~~~---~~~~~---------l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG 449 (454)
T 3u0b_A 401 -IPLATREVG---RRLNS---------LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ 449 (454)
T ss_dssp ------CHHH---HHSBT---------TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred -cchhhHHHH---Hhhcc---------ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence 000000001 11111 1224568999999999886532 246889999885
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-17 Score=147.01 Aligned_cols=224 Identities=9% Similarity=0.023 Sum_probs=145.7
Q ss_pred CCCCEEEEEcCc--hhHHHHHHHHHHhhCCCeEEEEecCC-----------hhhhccccccccCCCCCeeEEeCC-----
Q 016370 15 IKPVTICMIGAG--GFIGSHLCEKILLETPHKILALDVYN-----------DKIKHLLEPESQTGADRIQFHRLN----- 76 (390)
Q Consensus 15 ~~~~~vlItGat--G~iG~~l~~~L~~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~~~i~~~~~D----- 76 (390)
+++|++|||||+ |+||+++++.|.++ |++|++++|++ ....................+.+|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA-GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC-CCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 567899999999 99999999999999 99999998642 111111110000000012333333
Q ss_pred ---CC----C--------hhHHHHhhc-------cccEEEEeccccC---Cc---cccCChhHHHHHhhhhHHHHHHHHH
Q 016370 77 ---IK----H--------DSRLEGLIK-------MADLTINLAAICT---PA---DYNTRPLDTIYSNFIDALPVVKYCS 128 (390)
Q Consensus 77 ---~~----d--------~~~~~~~~~-------~~d~Vih~a~~~~---~~---~~~~~~~~~~~~nv~~~~~l~~~~~ 128 (390)
+. | .+++..+++ .+|+|||+||... .. ...++....+++|+.++.++++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 22 1 334444443 4899999998642 11 1223455678899999999999987
Q ss_pred hC---CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCC-chhHHHHHHHHHHHHHHhhh--
Q 016370 129 EN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR-WSYACAKQLIERLIYAEGAE-- 202 (390)
Q Consensus 129 ~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~~~~~-- 202 (390)
.. +.++|++||...+.... .. ..|+.+|...+.+.+.++.+
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~~---------------------------------~~~~~Y~asKaa~~~~~~~la~e~~ 211 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERIIP---------------------------------GYGGGMSSAKAALESDTRVLAFEAG 211 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCCT---------------------------------TCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCceEEEEeccccccCCC---------------------------------CcchHHHHHHHHHHHHHHHHHHHhC
Confidence 64 26899999976543210 11 26999999999999887654
Q ss_pred --cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 203 --NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 203 --~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.|+++.+++|+.+.+|.... . .....+........|+ ..+...+|+|++++.++....
T Consensus 212 ~~~gi~vn~v~PG~v~T~~~~~----------~-~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~ 271 (297)
T 1d7o_A 212 RKQNIRVNTISAGPLGSRAAKA----------I-GFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLA 271 (297)
T ss_dssp HHHCCEEEEEEECCCBCCCSSC----------C-SHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGG
T ss_pred cccCcEEEEEeccccccchhhh----------c-cccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccc
Confidence 58999999999999986431 0 1122222222222222 125679999999999886432
Q ss_pred -CCCCceEEecCC
Q 016370 281 -RANGHIFNVGNP 292 (390)
Q Consensus 281 -~~~~~~~nv~~~ 292 (390)
...|+.+++.++
T Consensus 272 ~~itG~~i~vdgG 284 (297)
T 1d7o_A 272 SAITGATIYVDNG 284 (297)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCCCCEEEECCC
Confidence 246789999986
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-16 Score=141.78 Aligned_cols=228 Identities=13% Similarity=0.153 Sum_probs=156.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||+.+++.|.++ |.+|++++|+.+.......... ...++.++.+|++|+++++++++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~-Ga~Vv~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEE-RAIPVVFARHAPDGAFLDALAQ--RQPRATYLPVELQDDAQCRDAVAQTIAT 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCCHHHHHHHHH--HCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCcccHHHHHHHHh--cCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999 9999999998764332211111 14578899999999988887775
Q ss_pred --cccEEEEeccccCCcccc---CChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|++||+||........ ++....+++|+.++..+++++. +.+.++|++||..-+....
T Consensus 81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~------------ 148 (258)
T 4gkb_A 81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG------------ 148 (258)
T ss_dssp HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS------------
T ss_pred hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC------------
Confidence 389999999986433222 2344567789999888777653 3347899999976443221
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...+.+.+.++.+ +|+++..+-||.|--|...... .. ...
T Consensus 149 ---------------------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~------~~-~~~ 200 (258)
T 4gkb_A 149 ---------------------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWI------AT-FED 200 (258)
T ss_dssp ---------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC----------------
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhh------hc-ccC
Confidence 2237999999999988887654 4899999999999776432000 00 000
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
-......+....|+ + +-+...+|+|.+++.++.... ...|+.+.|.+|
T Consensus 201 ~~~~~~~~~~~~pl---g-----~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG 249 (258)
T 4gkb_A 201 PEAKLAEIAAKVPL---G-----RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG 249 (258)
T ss_dssp --CHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hHHHHHHHHhcCCC---C-----CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence 01112222222222 0 124568999999999886432 357899999886
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-16 Score=140.52 Aligned_cols=226 Identities=10% Similarity=0.036 Sum_probs=149.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||+++++.|.++ |++|++.+|..... ......+.+|+++++++..+++
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLEL-GAQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEATRQR 75 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHT-TCEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHc-CCEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999975321 1234478899999998887765
Q ss_pred --cccEEEEeccccCCc--c----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA--D----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~--~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|++||+||..... . ..++....+++|+.++..+++++ ++.+ .++|++||...+-...
T Consensus 76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~-------- 147 (261)
T 4h15_A 76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP-------- 147 (261)
T ss_dssp TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------
T ss_pred cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC--------
Confidence 389999999975321 1 12234567789999988777655 3444 7899999965432210
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCC-CCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPG-IDGPSE 231 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~-~~~~~~ 231 (390)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+--|....... ......
T Consensus 148 ------------------------~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~ 203 (261)
T 4h15_A 148 ------------------------ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAG 203 (261)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTT
T ss_pred ------------------------CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhc
Confidence 01236999999999888887655 48999999999886542110000 000000
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
........+........|+ .-+...+|+|++++.++.... ...|+.+.|.+|
T Consensus 204 ~~~~~~~~~~~~~~~~~Pl---------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG 256 (261)
T 4h15_A 204 TDLEGGKKIIMDGLGGIPL---------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256 (261)
T ss_dssp CCHHHHHHHHHHHTTCCTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cchhhHHHHHHHHhcCCCC---------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence 0000011112222222222 125568999999999885432 246899999886
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=137.21 Aligned_cols=218 Identities=14% Similarity=0.127 Sum_probs=156.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
++++|++|||||++-||+.+++.|.++ |.+|++.+|+.... ..+.. ...++..+.+|++|+++++.+++.
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~-----~g~~~~~~~~Dv~d~~~v~~~~~~g~ 79 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAPDETLDIIAK-----DGGNASALLIDFADPLAAKDSFTDAG 79 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHH-----TTCCEEEEECCTTSTTTTTTSSTTTC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHH-----hCCcEEEEEccCCCHHHHHHHHHhCC
Confidence 467999999999999999999999999 99999999975321 11111 245788999999999988888764
Q ss_pred ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 90 ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
+|++||+||........ ++....+++|+.++..+++++. +.+ .++|++||...+....
T Consensus 80 iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~------------ 147 (247)
T 4hp8_A 80 FDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI------------ 147 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS------------
T ss_pred CCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC------------
Confidence 99999999987543222 2445577789999888877542 232 6899999975432211
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|.....+.+.++.+ +|+++..+-||.|--|... .+
T Consensus 148 ---------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~-------------~~ 193 (247)
T 4hp8_A 148 ---------------------RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE-------------AL 193 (247)
T ss_dssp ---------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-------------HH
T ss_pred ---------------------CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh-------------hc
Confidence 2237999999999888887654 4899999999998665322 11
Q ss_pred H--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 237 L--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 237 ~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. ......+....|+.- +-..+|+|.+++.++.... ...|+.+.|.+|
T Consensus 194 ~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 194 RADAARNKAILERIPAGR---------WGHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp HTSHHHHHHHHTTCTTSS---------CBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ccCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 1 112233344444322 3447899999998876432 246889999886
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=147.89 Aligned_cols=201 Identities=15% Similarity=0.154 Sum_probs=144.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhh---ccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIK---HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~---~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
++++|||||+|.||.+++++|.++ |+ .|+++.|+..... .+.... .....++.++.+|++|.+++..++..
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~-Ga~~vvl~~R~~~~~~~~~~l~~~l-~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 316 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQ-GAAHLVLTSRRGADAPGAAELRAEL-EQLGVRVTIAACDAADREALAALLAELPE 316 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHT-TCSEEEEEESSGGGSTTHHHHHHHH-HHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred CCEEEEECCCCchHHHHHHHHHHC-CCcEEEEEeCCCCChHHHHHHHHHH-HhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999999999999998 87 7888888643221 111110 01245789999999999999998863
Q ss_pred ---ccEEEEecccc-CCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccc-cccccCCCCCCCCCCCC
Q 016370 90 ---ADLTINLAAIC-TPAD----YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEV-YGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 90 ---~d~Vih~a~~~-~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~v-y~~~~~~~~~e~~~~~~ 159 (390)
+|+|||+||.. .... ..++....+++|+.++.++.+++.... .+||++||... +|..
T Consensus 317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~------------- 383 (496)
T 3mje_A 317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG------------- 383 (496)
T ss_dssp TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT-------------
T ss_pred hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC-------------
Confidence 89999999986 3211 112344677899999999999999888 89999999644 3321
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
....|+.+|...+.+.+++ +..|++++++.|+.+.+++... . ..
T Consensus 384 ---------------------g~~~YaAaKa~ldala~~~-~~~Gi~v~sV~pG~w~~~gm~~---------~-----~~ 427 (496)
T 3mje_A 384 ---------------------GQPGYAAANAYLDALAEHR-RSLGLTASSVAWGTWGEVGMAT---------D-----PE 427 (496)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHH-HHTTCCCEEEEECEESSSCC-------------------
T ss_pred ---------------------CcHHHHHHHHHHHHHHHHH-HhcCCeEEEEECCcccCCcccc---------C-----hH
Confidence 2347999999999888766 4569999999999997765430 0 00
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
....+... ....+..++.++++..++..+
T Consensus 428 ~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~ 456 (496)
T 3mje_A 428 VHDRLVRQ-----------GVLAMEPEHALGALDQMLEND 456 (496)
T ss_dssp -CHHHHHT-----------TEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCC
Confidence 11111111 123457899999999999875
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=137.21 Aligned_cols=231 Identities=12% Similarity=0.039 Sum_probs=142.2
Q ss_pred CCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCCh-----------hhhccccccccCCCCCeeEEeCCC----
Q 016370 15 IKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYND-----------KIKHLLEPESQTGADRIQFHRLNI---- 77 (390)
Q Consensus 15 ~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~~-----------~~~~~~~~~~~~~~~~i~~~~~D~---- 77 (390)
+++|++||||| +|.||+++++.|.++ |++|++++|++. ................+.++.+|+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASA-GARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTT-TCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHC-CCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence 56789999999 899999999999999 999999987531 111111100000000134444443
Q ss_pred --------CC--------hhHHHHhhc-------cccEEEEeccccC---Cc---cccCChhHHHHHhhhhHHHHHHHHH
Q 016370 78 --------KH--------DSRLEGLIK-------MADLTINLAAICT---PA---DYNTRPLDTIYSNFIDALPVVKYCS 128 (390)
Q Consensus 78 --------~d--------~~~~~~~~~-------~~d~Vih~a~~~~---~~---~~~~~~~~~~~~nv~~~~~l~~~~~ 128 (390)
+| .+++..+++ ++|++||+||... .. ...++....+++|+.++.++++++.
T Consensus 86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 165 (315)
T 2o2s_A 86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG 165 (315)
T ss_dssp TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 22 334544443 4899999999652 11 1122345678899999999999886
Q ss_pred hC---CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---
Q 016370 129 EN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE--- 202 (390)
Q Consensus 129 ~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~--- 202 (390)
.. +.++|++||...+....+ ....|+.+|...+.+.+.++.+
T Consensus 166 ~~m~~~g~Iv~isS~~~~~~~~~--------------------------------~~~~Y~asKaal~~l~~~la~el~~ 213 (315)
T 2o2s_A 166 PIMNEGGSAVTLSYLAAERVVPG--------------------------------YGGGMSSAKAALESDTRTLAWEAGQ 213 (315)
T ss_dssp TTEEEEEEEEEEEEGGGTSCCTT--------------------------------CCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEEecccccccCCC--------------------------------ccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 54 268999999765432110 1126999999999998877654
Q ss_pred -cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-
Q 016370 203 -NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA- 280 (390)
Q Consensus 203 -~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~- 280 (390)
.|+++.+++||.+..+..... +......+...+........|. ..+...+|+|++++.++....
T Consensus 214 ~~gIrvn~v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~ 279 (315)
T 2o2s_A 214 KYGVRVNAISAGPLKSRAASAI-----GKSGEKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLAR 279 (315)
T ss_dssp HTCCEEEEEEECCCCCHHHHHT-----TCSSSSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGT
T ss_pred ccCeEEEEEecccccchhhhhc-----cccccchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhc
Confidence 589999999998865421100 0000001111111111111111 124578999999999887432
Q ss_pred CCCCceEEecCC
Q 016370 281 RANGHIFNVGNP 292 (390)
Q Consensus 281 ~~~~~~~nv~~~ 292 (390)
...|+.+.+.+|
T Consensus 280 ~itG~~i~vdGG 291 (315)
T 2o2s_A 280 AVSGVTLYVDNG 291 (315)
T ss_dssp TCCSCEEEESTT
T ss_pred cCcCCEEEECCC
Confidence 246788888886
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.9e-16 Score=155.04 Aligned_cols=210 Identities=13% Similarity=0.046 Sum_probs=139.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec---------CChhhhccccccccCCCCCeeEEeCCCCChhHH
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV---------YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~ 83 (390)
..+++|++|||||+|.||+++++.|.++ |++|++++| +............. .+. ...+|+.|.+++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~---~~~-~~~~D~~d~~~~ 89 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAER-GAKVVVNDLGGTHSGDGASQRAADIVVDEIRK---AGG-EAVADYNSVIDG 89 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEC--------------CHHHHHHHHHH---TTC-CEEECCCCGGGH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcccccccCCHHHHHHHHHHHHH---hCC-eEEEEeCCHHHH
Confidence 3578899999999999999999999999 999999987 22222222111100 111 234799998888
Q ss_pred HHhhc-------cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeeccccccccc
Q 016370 84 EGLIK-------MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTI 147 (390)
Q Consensus 84 ~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~ 147 (390)
.++++ .+|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 90 ~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~ 169 (613)
T 3oml_A 90 AKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF 169 (613)
T ss_dssp HHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence 77776 3899999999875422 22345567889999999998877 4555 7999999965432210
Q ss_pred CCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCC
Q 016370 148 GSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIP 224 (390)
Q Consensus 148 ~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~ 224 (390)
....|+.+|...+.+.+.++.+ .|+.+.++.|+.+- +...
T Consensus 170 ---------------------------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~--- 212 (613)
T 3oml_A 170 ---------------------------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTE--- 212 (613)
T ss_dssp ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------C---
T ss_pred ---------------------------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhh---
Confidence 2347999999999998887655 47999999997542 1111
Q ss_pred CCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 225 GIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
... .......+..+|+|.+++.++.......|+++++.+|
T Consensus 213 ----------~~~------------------~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 213 ----------GIL------------------PDILFNELKPKLIAPVVAYLCHESCEDNGSYIESAAG 252 (613)
T ss_dssp ----------CCC------------------CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred ----------hcc------------------chhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence 000 0011223468899999998887654457889998875
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.6e-15 Score=134.80 Aligned_cols=230 Identities=10% Similarity=0.021 Sum_probs=126.1
Q ss_pred CCCCEEEEEcC--chhHHHHHHHHHHhhCCCeEEEEecCC-----------hhhhccc-----------cccccCCC--C
Q 016370 15 IKPVTICMIGA--GGFIGSHLCEKILLETPHKILALDVYN-----------DKIKHLL-----------EPESQTGA--D 68 (390)
Q Consensus 15 ~~~~~vlItGa--tG~iG~~l~~~L~~~~g~~V~~~~r~~-----------~~~~~~~-----------~~~~~~~~--~ 68 (390)
+++|++||||| +|.||+++++.|+++ |++|++++|++ ....... ........ .
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAA-GARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV 85 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHT-TCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHC-CCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence 56789999999 899999999999999 99999998642 1111100 00000000 0
Q ss_pred CeeEEeCCC------------CC--------hhHHHHhhc-------cccEEEEeccccC--C-c---cccCChhHHHHH
Q 016370 69 RIQFHRLNI------------KH--------DSRLEGLIK-------MADLTINLAAICT--P-A---DYNTRPLDTIYS 115 (390)
Q Consensus 69 ~i~~~~~D~------------~d--------~~~~~~~~~-------~~d~Vih~a~~~~--~-~---~~~~~~~~~~~~ 115 (390)
...++.+|+ +| .+++..++. .+|++||+||... . . ...++....+++
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v 165 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS 165 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence 134454443 22 224444443 4899999999642 1 1 112234567889
Q ss_pred hhhhHHHHHHHHHhC---CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCC-chhHHHHHH
Q 016370 116 NFIDALPVVKYCSEN---NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR-WSYACAKQL 191 (390)
Q Consensus 116 nv~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~-~~Y~~sK~~ 191 (390)
|+.++.++++++... +.++|++||...+.... .. ..|+.+|..
T Consensus 166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~---------------------------------~~~~~Y~asKaa 212 (319)
T 2ptg_A 166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP---------------------------------GYGGGMSSAKAA 212 (319)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEEeccccccccC---------------------------------ccchhhHHHHHH
Confidence 999999999988764 26899999976432210 11 269999999
Q ss_pred HHHHHHHHhhh----cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHH
Q 016370 192 IERLIYAEGAE----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKD 267 (390)
Q Consensus 192 ~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 267 (390)
.+.+.+.++.+ .|+++.+++|+.+..+..... +......+...+...+... .....+...+|
T Consensus 213 l~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~-----~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pee 278 (319)
T 2ptg_A 213 LESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAI-----GKAGDKTFIDLAIDYSEAN---------APLQKELESDD 278 (319)
T ss_dssp THHHHHHHHHHHHHHHCCEEEEEEECCCC---------------------------------------------CCCHHH
T ss_pred HHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhc-----ccccchhhHHHHHHHHhcc---------CCCCCCCCHHH
Confidence 99988887654 589999999999877642200 0000000000000000000 11123567999
Q ss_pred HHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 268 AIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 268 ~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
+|++++.++... ....|+.+.+.+|
T Consensus 279 vA~~v~~L~s~~~~~itG~~i~vdGG 304 (319)
T 2ptg_A 279 VGRAALFLLSPLARAVTGATLYVDNG 304 (319)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCcccCCccCCEEEECCC
Confidence 999999988753 2246789999886
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-14 Score=131.46 Aligned_cols=169 Identities=10% Similarity=0.024 Sum_probs=118.0
Q ss_pred CCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCC---------hhhhcccccccc--CCCCCeeEEeCCCCCh--
Q 016370 16 KPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYN---------DKIKHLLEPESQ--TGADRIQFHRLNIKHD-- 80 (390)
Q Consensus 16 ~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~~~~~~~~~~--~~~~~i~~~~~D~~d~-- 80 (390)
++|++|||||++ .||.+++++|.++ |++|++.++++ ............ .....+.++.+|+.+.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~-G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 79 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKR-NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence 357899999975 9999999999999 99999776554 211111111100 0123467888999876
Q ss_pred h------------------HHHHhhc-------cccEEEEeccccC--C-c---cccCChhHHHHHhhhhHHHHHHHHHh
Q 016370 81 S------------------RLEGLIK-------MADLTINLAAICT--P-A---DYNTRPLDTIYSNFIDALPVVKYCSE 129 (390)
Q Consensus 81 ~------------------~~~~~~~-------~~d~Vih~a~~~~--~-~---~~~~~~~~~~~~nv~~~~~l~~~~~~ 129 (390)
+ ++..++. .+|++||+||... . . ...++....+++|+.++..+++++..
T Consensus 80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 159 (329)
T 3lt0_A 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 6 5655554 3899999999642 1 1 11223456788999999999988765
Q ss_pred CC---CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCc-hhHHHHHHHHHHHHHHhhh---
Q 016370 130 NN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW-SYACAKQLIERLIYAEGAE--- 202 (390)
Q Consensus 130 ~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~-~Y~~sK~~~E~~~~~~~~~--- 202 (390)
.- .++|++||...+.... ... .|+.+|...+.+.+.++.+
T Consensus 160 ~m~~~g~Iv~isS~~~~~~~~---------------------------------~~~~~Y~asKaal~~~~~~la~el~~ 206 (329)
T 3lt0_A 160 IMKPQSSIISLTYHASQKVVP---------------------------------GYGGGMSSAKAALESDTRVLAYHLGR 206 (329)
T ss_dssp GEEEEEEEEEEECGGGTSCCT---------------------------------TCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCeEEEEeCccccCCCC---------------------------------cchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 43 5899999976432211 111 6999999999888877544
Q ss_pred -cCccEEEeecceecCC
Q 016370 203 -NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 203 -~~~~~~ilR~~~i~G~ 218 (390)
.|+++.++.||.+-.+
T Consensus 207 ~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 207 NYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHCCEEEEEEECCCCCH
T ss_pred ccCeEEEEEecceeech
Confidence 5899999999988655
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-14 Score=139.69 Aligned_cols=202 Identities=13% Similarity=0.108 Sum_probs=139.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEE-ecCChh-------------hhccccccccCCCCCeeEEeCCCCCh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK-ILAL-DVYNDK-------------IKHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~-~r~~~~-------------~~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
.++++|||||+|.||.+++++|.++ |++ |+++ +|+..+ ...+..... .....+.++.+|++|.
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~-G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvtd~ 327 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARD-GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLTDA 327 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHH-TCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTTSH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCCCH
Confidence 4579999999999999999999999 887 5556 776422 111111100 0135789999999999
Q ss_pred hHHHHhhcc------ccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHHHhCC------CcEEEeecccccc
Q 016370 81 SRLEGLIKM------ADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYCSENN------KRLIHFSTCEVYG 144 (390)
Q Consensus 81 ~~~~~~~~~------~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~v~~Ss~~vy~ 144 (390)
+++..++.. +|+|||+||....... .++....+++|+.|+.++.+++.... .+||++||...+-
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 999998874 6999999998754222 22344577899999999999887653 5899999975432
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIP 224 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~ 224 (390)
... ....|+.+|...+.+.+++ +..|++++++.|+.+-.+...
T Consensus 408 g~~---------------------------------g~~~YaaaKa~l~~lA~~~-~~~gi~v~sI~pG~~~tgm~~--- 450 (525)
T 3qp9_A 408 GGA---------------------------------GQGAYAAGTAFLDALAGQH-RADGPTVTSVAWSPWEGSRVT--- 450 (525)
T ss_dssp CCT---------------------------------TCHHHHHHHHHHHHHHTSC-CSSCCEEEEEEECCBTTSGGG---
T ss_pred CCC---------------------------------CCHHHHHHHHHHHHHHHHH-HhCCCCEEEEECCcccccccc---
Confidence 221 2347999999999887655 445899999999988222110
Q ss_pred CCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 225 GIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
..... ..+... ....+..+++++++..++..+
T Consensus 451 ---------~~~~~---~~~~~~-----------g~~~l~pee~a~~l~~~l~~~ 482 (525)
T 3qp9_A 451 ---------EGATG---ERLRRL-----------GLRPLAPATALTALDTALGHG 482 (525)
T ss_dssp ---------SSHHH---HHHHHT-----------TBCCBCHHHHHHHHHHHHHHT
T ss_pred ---------chhhH---HHHHhc-----------CCCCCCHHHHHHHHHHHHhCC
Confidence 00111 111111 123567999999999999875
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=7.1e-13 Score=142.72 Aligned_cols=232 Identities=13% Similarity=0.084 Sum_probs=148.9
Q ss_pred CCCCCEEEEEcCchh-HHHHHHHHHHhhCCCeEEEE-ecCChhhhcccccc---ccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 14 PIKPVTICMIGAGGF-IGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPE---SQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~-iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~---~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.+++|++|||||+|. ||.++++.|+++ |++|+++ .|+........... .......+.++.+|++|.+++..++.
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~-GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~ 750 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQG-GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 750 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence 367789999999999 999999999999 9999998 46554432221110 00013468899999999998887763
Q ss_pred -------------cccEEEEeccccCCc-ccc------CChhHHHHHhhhhHHHHHHHHHhC------C-CcEEEeeccc
Q 016370 89 -------------MADLTINLAAICTPA-DYN------TRPLDTIYSNFIDALPVVKYCSEN------N-KRLIHFSTCE 141 (390)
Q Consensus 89 -------------~~d~Vih~a~~~~~~-~~~------~~~~~~~~~nv~~~~~l~~~~~~~------~-~~~v~~Ss~~ 141 (390)
.+|+|||+||..... ... ++....+++|+.++..++++++.. + .+||++||..
T Consensus 751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a 830 (1887)
T 2uv8_A 751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 830 (1887)
T ss_dssp HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence 489999999986432 111 223567789999999998877322 2 4899999964
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHH-HHHHhhhcC--ccEEEeecceecCC
Q 016370 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL-IYAEGAENG--LEFTIVRPFNWIGP 218 (390)
Q Consensus 142 vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ilR~~~i~G~ 218 (390)
.+.. ....|+.+|...+.+ .+.++.+.+ ++++++.||.+-+.
T Consensus 831 g~~g-----------------------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT 875 (1887)
T 2uv8_A 831 GTFG-----------------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGT 875 (1887)
T ss_dssp TCSS-----------------------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC
T ss_pred hccC-----------------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccc
Confidence 3211 012699999999988 555544433 89999999999752
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEec--CC-C
Q 016370 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVG--NP-H 293 (390)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~--~~-~ 293 (390)
.... . ....... ....++ -+...+|+|++++.++... ....|+.+.+. +| .
T Consensus 876 ~m~~--------~--~~~~~~~----~~~~pl----------r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~ 931 (1887)
T 2uv8_A 876 GLMS--------A--NNIIAEG----IEKMGV----------RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ 931 (1887)
T ss_dssp ---------------CCTTHHH----HHTTSC----------CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTT
T ss_pred cccc--------c--chhHHHH----HHhcCC----------CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCee
Confidence 2110 0 0011111 111111 2347999999999888653 11235677763 43 1
Q ss_pred CcccHHHHHHHH
Q 016370 294 NEVTVRQLAEMM 305 (390)
Q Consensus 294 ~~~s~~~l~~~i 305 (390)
....+.++...+
T Consensus 932 ~~~~l~el~~~l 943 (1887)
T 2uv8_A 932 FVPELKEFTAKL 943 (1887)
T ss_dssp TSSSHHHHHHHH
T ss_pred ccccHHHHHHHH
Confidence 233455554433
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.5e-12 Score=139.91 Aligned_cols=230 Identities=12% Similarity=0.066 Sum_probs=147.1
Q ss_pred CCCCEEEEEcCchh-HHHHHHHHHHhhCCCeEEEEe-cCChhhhcccccc---ccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 15 IKPVTICMIGAGGF-IGSHLCEKILLETPHKILALD-VYNDKIKHLLEPE---SQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~-iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~---~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
++++++|||||+|. ||.++++.|.++ |++|++++ |............ .......+.++.+|++|.+++..++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~-GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSG-GAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 56789999999999 999999999999 99999985 5443332111000 00013468899999999998887764
Q ss_pred ----------cccEEEEeccccCCc-ccc------CChhHHHHHhhhhHHHHHHHHH---h---CC-CcEEEeecccccc
Q 016370 89 ----------MADLTINLAAICTPA-DYN------TRPLDTIYSNFIDALPVVKYCS---E---NN-KRLIHFSTCEVYG 144 (390)
Q Consensus 89 ----------~~d~Vih~a~~~~~~-~~~------~~~~~~~~~nv~~~~~l~~~~~---~---~~-~~~v~~Ss~~vy~ 144 (390)
.+|+|||+||..... ... ++....+++|+.++.+++++++ . .+ .+||++||...+.
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 489999999986432 111 2235677899999988876632 2 12 5899999964321
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-c--CccEEEeecceec-CCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-N--GLEFTIVRPFNWI-GPRM 220 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~ilR~~~i~-G~~~ 220 (390)
.. ...|+.+|...+.+.+.+..+ . +++++.+.||.+- .+..
T Consensus 809 gg-----------------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~ 853 (1878)
T 2uv9_A 809 GN-----------------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLM 853 (1878)
T ss_dssp SC-----------------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSC
T ss_pred CC-----------------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccc
Confidence 10 126999999999887655332 1 3899999999886 3322
Q ss_pred CCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEec--CC-CCc
Q 016370 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVG--NP-HNE 295 (390)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~--~~-~~~ 295 (390)
. . . ..........++ -+...+|+|++++.++.... ...|+.+.+. +| ...
T Consensus 854 ~-------------~-~-~~~~~~~~~~pl----------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~ 908 (1878)
T 2uv9_A 854 S-------------A-N-NLVAEGVEKLGV----------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI 908 (1878)
T ss_dssp S-------------H-H-HHTHHHHHTTTC----------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred c-------------c-c-hhhHHHHHhcCC----------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence 1 1 0 111111112111 13379999999998875431 1346777763 43 112
Q ss_pred ccHHHHHHHH
Q 016370 296 VTVRQLAEMM 305 (390)
Q Consensus 296 ~s~~~l~~~i 305 (390)
..+.++...+
T Consensus 909 ~~l~el~~~l 918 (1878)
T 2uv9_A 909 PDLKGLMTKL 918 (1878)
T ss_dssp TTHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 4455554443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-11 Score=123.05 Aligned_cols=226 Identities=15% Similarity=0.211 Sum_probs=146.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhh-hccccccccCCCCCeeEEeCCC-CChhHH-HHh---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKI-KHLLEPESQTGADRIQFHRLNI-KHDSRL-EGL--- 86 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~-~~~~~~~~~~~~~~i~~~~~D~-~d~~~~-~~~--- 86 (390)
++++|.+|||||++-||..+++.|.++ |++|++.++.. ... ..+.. ....+..+.+|+ .+.+.+ +.+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~-Ga~Vv~~~~~~~~~~~~~i~~-----~g~~~~~~~~Dv~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKY-GAKVVVNDFKDATKTVDEIKA-----AGGEAWPDQHDVAKDSEAIIKNVIDK 392 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHH-----TTCEEEEECCCHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHC-CCEEEEEeCccHHHHHHHHHh-----cCCeEEEEEcChHHHHHHHHHHHHHh
Confidence 467889999999999999999999999 99999988642 111 11111 123466678888 554433 223
Q ss_pred hccccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 87 IKMADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 87 ~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+..+|++||+||....... .++....+++|+.++..+.+++ ++.+ .++|++||..-+-...
T Consensus 393 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~---------- 462 (604)
T 2et6_A 393 YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF---------- 462 (604)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC----------
Confidence 2349999999998643221 2234567889999988887765 3344 7899999964321110
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|.....+.+.++.+ +|+++..+.|+. -.+.
T Consensus 463 -----------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m--------------- 503 (604)
T 2et6_A 463 -----------------------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM--------------- 503 (604)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------
T ss_pred -----------------------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc---------------
Confidence 2237999999999888877654 589999999972 1111
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC----------------CCcccH
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP----------------HNEVTV 298 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~----------------~~~~s~ 298 (390)
...... . ...+....+|+|.++..++.......|+++.+.+| +..++.
T Consensus 504 --~~~~~~----~----------~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~ 567 (604)
T 2et6_A 504 --TLSIMR----E----------QDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTV 567 (604)
T ss_dssp -------------------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCH
T ss_pred --ccccCc----h----------hhccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCH
Confidence 000000 0 00123468899999998876543356788888764 123566
Q ss_pred HHHHHHHHHHhh
Q 016370 299 RQLAEMMTEVYA 310 (390)
Q Consensus 299 ~~l~~~i~~~~g 310 (390)
.++.+.+.+...
T Consensus 568 ~~~~~~~~~i~~ 579 (604)
T 2et6_A 568 EFIKEHLNEITD 579 (604)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhc
Confidence 666666665443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=136.39 Aligned_cols=168 Identities=16% Similarity=0.130 Sum_probs=117.9
Q ss_pred CCCCCEEEEEcCchh-HHHHHHHHHHhhCCCeEEEE-ecCChhhhcccccccc---CCCCCeeEEeCCCCChhHHHHhhc
Q 016370 14 PIKPVTICMIGAGGF-IGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQ---TGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~-iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~---~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.+.+|++|||||+|. ||.++++.|+++ |++|+++ .|+............. .....+.++.+|++|.+++.+++.
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~-GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe 551 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQG-GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 551 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHH-TCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHC-cCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence 356789999999998 999999999999 9999998 4655443322111100 013468889999999998887763
Q ss_pred -------------cccEEEEeccccCCc-ccc------CChhHHHHHhhhhHHHHHHHHHh--C----C-CcEEEeeccc
Q 016370 89 -------------MADLTINLAAICTPA-DYN------TRPLDTIYSNFIDALPVVKYCSE--N----N-KRLIHFSTCE 141 (390)
Q Consensus 89 -------------~~d~Vih~a~~~~~~-~~~------~~~~~~~~~nv~~~~~l~~~~~~--~----~-~~~v~~Ss~~ 141 (390)
.+|+|||+||..... ... ++....+++|+.++..++++++. . + .+||++||..
T Consensus 552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA 631 (1688)
T 2pff_A 552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 631 (1688)
T ss_dssp HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence 489999999976432 111 22345677899999999887722 1 2 4899999964
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHH-HHHhhhcC--ccEEEeecceecC
Q 016370 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI-YAEGAENG--LEFTIVRPFNWIG 217 (390)
Q Consensus 142 vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~-~~~~~~~~--~~~~ilR~~~i~G 217 (390)
.+.. ....|+.+|...+.+. +.++.+.+ +++..+.||.+-|
T Consensus 632 G~~G-----------------------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 632 GTFG-----------------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp TTSS-----------------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred hccC-----------------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 3211 1126999999999984 33333332 7888888888875
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-11 Score=122.76 Aligned_cols=226 Identities=16% Similarity=0.175 Sum_probs=143.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC---------hhhhccccccccCCCCCeeEEeCCCCChhHHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN---------DKIKHLLEPESQTGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~ 84 (390)
++++|.+|||||++-||+.+++.|.++ |++|++.+|.. ............ ....+ .+|+.|.++++
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~-Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-~g~~~---~~d~~d~~~~~ 79 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKL-GAKVVVNDLGGALNGQGGNSKAADVVVDEIVK-NGGVA---VADYNNVLDGD 79 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECC-----------CHHHHHHHHHHH-TTCEE---EEECCCTTCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCccccccccchHHHHHHHHHHHh-cCCeE---EEEcCCHHHHH
Confidence 367889999999999999999999999 99999998754 222221111100 01122 24555553333
Q ss_pred Hhh-------ccccEEEEeccccCCccc----cCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccC
Q 016370 85 GLI-------KMADLTINLAAICTPADY----NTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIG 148 (390)
Q Consensus 85 ~~~-------~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~ 148 (390)
+++ ..+|++||+||....... .++....+++|+.|+..+++++ ++.+ .++|++||..-.-...
T Consensus 80 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~- 158 (604)
T 2et6_A 80 KIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF- 158 (604)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-
Confidence 332 349999999998643221 2234567889999988887765 3334 6899999964321110
Q ss_pred CCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCC
Q 016370 149 SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPG 225 (390)
Q Consensus 149 ~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~ 225 (390)
....|+.+|.....+.+.++.+ +|+++..+.|+ + . .
T Consensus 159 --------------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~---~-T---- 197 (604)
T 2et6_A 159 --------------------------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A---R-S---- 197 (604)
T ss_dssp --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C---C-C----
T ss_pred --------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C---c-C----
Confidence 1237999999999888887654 48999999995 2 1 1
Q ss_pred CCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC-------------
Q 016370 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP------------- 292 (390)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~------------- 292 (390)
.+.. .. .+ .........+|+|.+++.++.......|+++.+.+|
T Consensus 198 ---------~m~~----~~---~~-------~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~ 254 (604)
T 2et6_A 198 ---------RMTE----SI---MP-------PPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGV 254 (604)
T ss_dssp ---------HHHH----TT---SC-------HHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCE
T ss_pred ---------cccc----cc---CC-------hhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccce
Confidence 1110 00 00 001123468999999999987654456778877653
Q ss_pred ----CCcccHHHHHHHHHHHh
Q 016370 293 ----HNEVTVRQLAEMMTEVY 309 (390)
Q Consensus 293 ----~~~~s~~~l~~~i~~~~ 309 (390)
+..++..++.+.+.+..
T Consensus 255 ~~~~~~~~~~~~v~~~~~~~~ 275 (604)
T 2et6_A 255 LFKPDQSFTAEVVAKRFSEIL 275 (604)
T ss_dssp ECCSSTTCCHHHHHHHHHHHT
T ss_pred ecCCCCCCCHHHHHHHHHHhh
Confidence 12467788887777654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3e-11 Score=111.94 Aligned_cols=172 Identities=10% Similarity=-0.084 Sum_probs=116.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHh-hCCCeEEEEecCChhhhcc-----------ccccccCCCCCeeEEeCCCCChhHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILL-ETPHKILALDVYNDKIKHL-----------LEPESQTGADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~-~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~i~~~~~D~~d~~~~ 83 (390)
.+|++|||||++-||.++++.|.+ + |++|++++|........ ...........+..+.+|++|.+++
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~-GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGC-GADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhc-CCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 568999999999999999999999 9 99999998865432210 0000011234678899999999888
Q ss_pred HHhhc-------cccEEEEeccccC-------------Cc-------------------------cccCChhHHHHHhhh
Q 016370 84 EGLIK-------MADLTINLAAICT-------------PA-------------------------DYNTRPLDTIYSNFI 118 (390)
Q Consensus 84 ~~~~~-------~~d~Vih~a~~~~-------------~~-------------------------~~~~~~~~~~~~nv~ 118 (390)
..++. ++|++||+||... .. ...++....+++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 77765 3899999998741 00 011223345566776
Q ss_pred hHH-HHHHHHHhC-----CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHH
Q 016370 119 DAL-PVVKYCSEN-----NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192 (390)
Q Consensus 119 ~~~-~l~~~~~~~-----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~ 192 (390)
+.. .++.++... +.++|.+||........ . .....|+.+|...
T Consensus 205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p---------~----------------------~~~~aY~AaKaal 253 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD---------I----------------------YWNGSIGAAKKDL 253 (405)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT---------T----------------------TTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC---------C----------------------ccchHHHHHHHHH
Confidence 654 445544321 25899999965321110 0 0114799999999
Q ss_pred HHHHHHHhhh---c-CccEEEeecceecCCC
Q 016370 193 ERLIYAEGAE---N-GLEFTIVRPFNWIGPR 219 (390)
Q Consensus 193 E~~~~~~~~~---~-~~~~~ilR~~~i~G~~ 219 (390)
+.+.+.++.+ . |+++.++-|+.+--+.
T Consensus 254 ~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~ 284 (405)
T 3zu3_A 254 DQKVLAIRESLAAHGGGDARVSVLKAVVSQA 284 (405)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred HHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence 9988877654 4 8899999999886653
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=95.51 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=79.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.+|+|+|+|+ |++|+.+++.|.+. | ++|++++|++.....+.. .++.++.+|+.+.+.+.++++++|+||
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNR-------MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHT-------TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHh-------CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 3579999999 99999999999998 7 999999998876655432 477889999999999999999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
|+++.. ....+++++.+.+.+++.+|+
T Consensus 75 ~~~~~~------------------~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 75 SAAPFF------------------LTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp ECSCGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred ECCCch------------------hhHHHHHHHHHhCCCEEEecC
Confidence 998521 146788899999855555544
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.3e-11 Score=124.48 Aligned_cols=204 Identities=12% Similarity=0.135 Sum_probs=139.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHH-hhCCC-eEEEEecCChhh---hccccccccCCCCCeeEEeCCCCChhHHHHhhcc-
Q 016370 16 KPVTICMIGAGGFIGSHLCEKIL-LETPH-KILALDVYNDKI---KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM- 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~-~~~g~-~V~~~~r~~~~~---~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~- 89 (390)
.++++|||||+|-||..+++.|. ++ |. .|++++|+.... ..+..... .....+.++.+|++|.+++.++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~-Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~~ 606 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIER-GVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLASI 606 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTS-SCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cccceeeccCCCCcHHHHHHHHHHHc-CCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 45789999999999999999999 67 87 588888874322 22111110 1245788999999999999988864
Q ss_pred -----ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 90 -----ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
+|+|||+||........ ++....+++|+.|+.++.+++... -+||++||..-+-...
T Consensus 607 ~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~-l~iV~~SS~ag~~g~~------------- 672 (795)
T 3slk_A 607 PDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD-VALVLFSSVSGVLGSG------------- 672 (795)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT-SEEEEEEETHHHHTCS-------------
T ss_pred HHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEccHHhcCCCC-------------
Confidence 69999999987543222 234456778999999999988433 3899999975432221
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhH-HH
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL-AC 239 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~ 239 (390)
....|+.+|...+.+.+++ +..|++++.+-||.+-.++.. ..+ ..
T Consensus 673 --------------------g~~~YaAaka~~~alA~~~-~~~Gi~v~sI~pG~v~t~g~~-------------~~~~~~ 718 (795)
T 3slk_A 673 --------------------GQGNYAAANSFLDALAQQR-QSRGLPTRSLAWGPWAEHGMA-------------STLREA 718 (795)
T ss_dssp --------------------SCHHHHHHHHHHHHHHHHH-HHTTCCEEEEEECCCSCCCHH-------------HHHHHH
T ss_pred --------------------CCHHHHHHHHHHHHHHHHH-HHcCCeEEEEECCeECcchhh-------------ccccHH
Confidence 2347999998888777766 456999999999888654321 111 11
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
....+.+. ....+..++..+.+..++..+.
T Consensus 719 ~~~~~~~~-----------g~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 719 EQDRLARS-----------GLLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHT-----------TBCCCCHHHHHHHHHHHHTSSC
T ss_pred HHHHHHhc-----------CCCCCCHHHHHHHHHHHHhCCC
Confidence 11122111 1224567888888888888753
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=9.4e-11 Score=110.46 Aligned_cols=172 Identities=10% Similarity=-0.065 Sum_probs=113.9
Q ss_pred CCCCEEEEEcCchhHHHH--HHHHHHhhCCCeEEEEecCChhh------------hccccccccCCCCCeeEEeCCCCCh
Q 016370 15 IKPVTICMIGAGGFIGSH--LCEKILLETPHKILALDVYNDKI------------KHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~--l~~~L~~~~g~~V~~~~r~~~~~------------~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
..+|++|||||++-||.+ +++.|.++ |++|++++|..... ..+... .......+..+.+|++|.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~-Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGP-EAHTIGVSYETGATDRRIGTAGWYNNIFFKEF-AKKKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSS-CCEEEEEECCCCCCSSCCCCHHHHHHHHHHHH-HHHTTCCEEEEESCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhC-CCEEEEEecCcchhhhcccccccchHHHHHHH-HHHcCCcEEEEEeeCCCH
Confidence 467899999999999999 99999998 99999999865332 111111 011234688899999999
Q ss_pred hHHHHhhc-------cccEEEEecccc-------------CCcc-------------------------ccCChhHHHHH
Q 016370 81 SRLEGLIK-------MADLTINLAAIC-------------TPAD-------------------------YNTRPLDTIYS 115 (390)
Q Consensus 81 ~~~~~~~~-------~~d~Vih~a~~~-------------~~~~-------------------------~~~~~~~~~~~ 115 (390)
++++++++ .+|++||+||.. .... ...+....+++
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v 215 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV 215 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 88877765 389999999874 0000 11112233445
Q ss_pred hhhhHH-HHHHHHHhCC-----CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHH
Q 016370 116 NFIDAL-PVVKYCSENN-----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189 (390)
Q Consensus 116 nv~~~~-~l~~~~~~~~-----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK 189 (390)
|..+.. .++.++.... .++|.+||....... |. .....|+.+|
T Consensus 216 n~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~---------p~----------------------~~~~aY~ASK 264 (418)
T 4eue_A 216 MGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY---------KI----------------------YREGTIGIAK 264 (418)
T ss_dssp HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT---------TT----------------------TTTSHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC---------Cc----------------------cccHHHHHHH
Confidence 544443 4445443322 579999986422111 00 0114799999
Q ss_pred HHHHHHHHHHhhh----cCccEEEeecceecCCC
Q 016370 190 QLIERLIYAEGAE----NGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 190 ~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~ 219 (390)
...+.+.+.++.+ .|+++.++-|+.+--+.
T Consensus 265 aAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~ 298 (418)
T 4eue_A 265 KDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKA 298 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred HHHHHHHHHHHHHhCCccCeEEEEEECCcCcChh
Confidence 9999888877644 57999999999887653
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.23 E-value=9e-11 Score=109.75 Aligned_cols=173 Identities=13% Similarity=-0.055 Sum_probs=115.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHh-hCCCeEEEEecCChhhhcc-----------ccccccCCCCCeeEEeCCCCChhHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILL-ETPHKILALDVYNDKIKHL-----------LEPESQTGADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~-~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~i~~~~~D~~d~~~~ 83 (390)
.+|++|||||++-||.++++.|.+ + |++|++++|........ ...........+..+.+|++|.+++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~-GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGF-GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 478999999999999999999999 9 99999999876443211 0000011234678899999999887
Q ss_pred HHhhc--------cccEEEEecccc-------------CCcc-------------------------ccCChhHHHHHhh
Q 016370 84 EGLIK--------MADLTINLAAIC-------------TPAD-------------------------YNTRPLDTIYSNF 117 (390)
Q Consensus 84 ~~~~~--------~~d~Vih~a~~~-------------~~~~-------------------------~~~~~~~~~~~nv 117 (390)
++++. ++|++||+||.. .... ..++....+++|.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 76653 379999999862 1000 1112223444555
Q ss_pred hhHH-HHHHHHHhC-----CCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHH
Q 016370 118 IDAL-PVVKYCSEN-----NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191 (390)
Q Consensus 118 ~~~~-~l~~~~~~~-----~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~ 191 (390)
.+.. .++.++... +.++|++||..-.-.... .....|+.+|..
T Consensus 219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~-------------------------------~~~~aY~ASKaA 267 (422)
T 3s8m_A 219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI-------------------------------YWHGALGKAKVD 267 (422)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH-------------------------------HTSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC-------------------------------ccchHHHHHHHH
Confidence 5443 455554322 258999999643211100 011379999999
Q ss_pred HHHHHHHHhhh---cCccEEEeecceecCCCC
Q 016370 192 IERLIYAEGAE---NGLEFTIVRPFNWIGPRM 220 (390)
Q Consensus 192 ~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~ 220 (390)
.+.+.+.++.+ .|+++.++.|+.|--+..
T Consensus 268 l~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 268 LDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred HHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 99988887655 489999999999877654
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=112.27 Aligned_cols=166 Identities=13% Similarity=0.047 Sum_probs=114.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-------eEEEEecC----Chhhhc----cccccccCCCCCeeEEeCCCCCh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-------KILALDVY----NDKIKH----LLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
++|||+||||+||||++++..|+.. |+ +|+++++. ...... +... ...+ ..|+...
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~-~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~-------~~~~-~~~i~~~ 74 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG-DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC-------AFPL-LAGMTAH 74 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT-------TCTT-EEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh-------cccc-cCcEEEe
Confidence 4579999999999999999999987 64 89999887 322221 1110 0111 2355555
Q ss_pred hHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C--CcEEEeeccc---ccccccCCCCCCC
Q 016370 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N--KRLIHFSTCE---VYGKTIGSFLPKD 154 (390)
Q Consensus 81 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~--~~~v~~Ss~~---vy~~~~~~~~~e~ 154 (390)
.++.++++++|+|||+|+.... ...+....+..|+..++++++.+.+. + .+||++|... +|-.... .+.
T Consensus 75 ~~~~~al~~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~---~~~ 149 (329)
T 1b8p_A 75 ADPMTAFKDADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKS---APS 149 (329)
T ss_dssp SSHHHHTTTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHT---CTT
T ss_pred cCcHHHhCCCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHH---cCC
Confidence 6788889999999999997542 33455677889999999999999887 3 4888888621 0100000 000
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 219 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~ 219 (390)
. .+...++.+++...++...+++..|++...++...++|.+
T Consensus 150 ~------------------------p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 150 L------------------------PAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH 190 (329)
T ss_dssp S------------------------CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred C------------------------CHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence 0 1223588888888888888888788887777766778854
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.06 E-value=6e-10 Score=102.20 Aligned_cols=114 Identities=17% Similarity=0.129 Sum_probs=82.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
++|||+|+||+|++|++++..|+.+ | ++|+++++.+.... .+... .....+ .+ +.+..++.++++++|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~-g~~~ev~l~Di~~~~~~~~dL~~~-----~~~~~v-~~-~~~t~d~~~al~gaD 78 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN-PLVSVLHLYDVVNAPGVTADISHM-----DTGAVV-RG-FLGQQQLEAALTGMD 78 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC-TTEEEEEEEESSSHHHHHHHHHTS-----CSSCEE-EE-EESHHHHHHHHTTCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC-CCCCEEEEEeCCCcHhHHHHhhcc-----cccceE-EE-EeCCCCHHHHcCCCC
Confidence 4579999999999999999999887 7 78999998765111 11110 011111 11 334567888899999
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
+|||+|+.... ...........|+.+++++++.+.+.+ ..+|+++|
T Consensus 79 vVi~~ag~~~~--~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 79 LIIVPAGVPRK--PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp EEEECCCCCCC--SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEEEcCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 99999996542 222334668899999999999999988 77888877
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.9e-09 Score=119.66 Aligned_cols=166 Identities=14% Similarity=0.055 Sum_probs=114.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhh---ccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIK---HLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~---~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.++++|||||+|-||..+++.|.++ |++ |++++|+..... ....... .....+.++.+|++|.+++.+++.
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~-Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLR-GAQKLVLTSRSGIRTGYQARQVREWR-RQGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCSHHHHHHHHHHH-HTTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHC-CCCEEEEEeCCCcchHHHHHHHHHHH-hCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999 887 777888754321 1111000 013467889999999998887775
Q ss_pred ---cccEEEEeccccCCcc----ccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD----YNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|+|||+||...... ..++....+++|+.|+.++.+++...- .+||++||....-...
T Consensus 1961 ~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~----------- 2029 (2512)
T 2vz8_A 1961 QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA----------- 2029 (2512)
T ss_dssp HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT-----------
T ss_pred hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC-----------
Confidence 3899999999764221 123344567789999999988776532 6899999965432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecC
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG 217 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G 217 (390)
....|+.+|...+.+.+... ..|++.+.+-.+.+-+
T Consensus 2030 ----------------------g~~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2030 ----------------------GQANYGFANSAMERICEKRR-HDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBCT
T ss_pred ----------------------CcHHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcCC
Confidence 22379999999999988654 3489988888776543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=7.5e-09 Score=82.90 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~V 93 (390)
+.|++|+|+|+ |.+|+.+++.|.+. |++|+++++++.....+.. .+..++.+|..+.+.+.++ +.++|+|
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRM-GHEVLAVDINEEKVNAYAS-------YATHAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTT-------TCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-------hCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 45678999998 99999999999998 8999999998765554332 2456788999998888876 6789999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeeccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVY 143 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy 143 (390)
|++++.. .+.|. .++..+++.+ .++|..++...+
T Consensus 75 i~~~~~~------------~~~~~----~~~~~~~~~~~~~ii~~~~~~~~ 109 (144)
T 2hmt_A 75 IVAIGAN------------IQAST----LTTLLLKELDIPNIWVKAQNYYH 109 (144)
T ss_dssp EECCCSC------------HHHHH----HHHHHHHHTTCSEEEEECCSHHH
T ss_pred EECCCCc------------hHHHH----HHHHHHHHcCCCeEEEEeCCHHH
Confidence 9988631 11222 3566777777 777766665444
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=5.5e-09 Score=95.30 Aligned_cols=168 Identities=17% Similarity=0.116 Sum_probs=100.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEec--CChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDV--YNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r--~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
|||+||||+|++|++++..|+.+ + .++.++++ .+..... +.... ......+.+..+ .+.+.+++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~-~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~----~d~l~~al~g 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE-PFMKDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIYVE----SDENLRIIDE 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC-TTCCEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEEEE----ETTCGGGGTT
T ss_pred CEEEEECCCChhHHHHHHHHHhC-CCCCEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEEeC----CcchHHHhCC
Confidence 58999999999999999999987 5 35888887 4322211 11100 000012222221 1236677899
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
+|+|||+|+... .........+..|+.+++++++++++.+.++|+++|--+.-...- .-+...+
T Consensus 75 aD~Vi~~Ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~~~t~~--~~k~~~~------------ 138 (313)
T 1hye_A 75 SDVVIITSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVMTYK--ALVDSKF------------ 138 (313)
T ss_dssp CSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHHHHHHH--HHHHHCC------------
T ss_pred CCEEEECCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHHHHHHH--HHHhhCc------------
Confidence 999999999753 223345567899999999999999887655777766322110000 0000000
Q ss_pred CCCcccCCCCCCCchhHH-HHHHHHHHHHHHhhhcCccEEEeecceecCC
Q 016370 170 ASPCIFGSIEKQRWSYAC-AKQLIERLIYAEGAENGLEFTIVRPFNWIGP 218 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~-sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~ 218 (390)
.|...+|. +.+...++....++..|++..-++. .++|.
T Consensus 139 ----------p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~ 177 (313)
T 1hye_A 139 ----------ERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGE 177 (313)
T ss_dssp ----------CTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred ----------ChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence 13335676 6666666666666666776555554 45553
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.3e-09 Score=96.26 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=76.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEec--CChhhhcc-cccccc-CCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDV--YNDKIKHL-LEPESQ-TGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r--~~~~~~~~-~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|||+||||+|++|++++..|+.. +. ++.++++ .+...+.. .+.... .....+.+... + .++++++|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~-~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~~~aD 72 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR-DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDTAGSD 72 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHhCCCC
Confidence 68999999999999999999887 54 6888888 44322110 000000 00123333331 1 44578899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
+|||+|+.... ........+..|+.+++++++++++.+ ..+|+++|
T Consensus 73 vVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 73 VVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp EEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 99999997532 223445678899999999999999998 77787777
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.5e-08 Score=97.05 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|++|+|+|+| +|++|+++++.|.+. |++|++++|+......+... ..++..+.+|+.|.+++.+++.++|+||
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~-G~~V~v~~R~~~~a~~la~~-----~~~~~~~~~Dv~d~~~l~~~l~~~DvVI 73 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAG-----VQHSTPISLDVNDDAALDAEVAKHDLVI 73 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTT-TCEEEEEESSHHHHHHTTTT-----CTTEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC-cCEEEEEECCHHHHHHHHHh-----cCCceEEEeecCCHHHHHHHHcCCcEEE
Confidence 4578999998 899999999999987 89999999987665544331 1247788999999999999999999999
Q ss_pred EeccccCCccccCChhHHHH--Hhh-------hhHHHHHHHHHhCCCc
Q 016370 95 NLAAICTPADYNTRPLDTIY--SNF-------IDALPVVKYCSENNKR 133 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~--~nv-------~~~~~l~~~~~~~~~~ 133 (390)
|+++...... -....++ .|+ ..+.+++++|++.|.+
T Consensus 74 n~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~ 118 (450)
T 1ff9_A 74 SLIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT 118 (450)
T ss_dssp ECCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred ECCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence 9998642110 0111222 122 2567889999998844
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=4.6e-08 Score=111.09 Aligned_cols=235 Identities=13% Similarity=0.084 Sum_probs=142.9
Q ss_pred CCCCCEEEEEcCchh-HHHHHHHHHHhhCCCeEEEEecCChh-----hhccccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGF-IGSHLCEKILLETPHKILALDVYNDK-----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~-iG~~l~~~L~~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
.+++|++|||||++- ||..+++.|.++ |++|++++|+... .+.+...... ....+..+.+|++|.++++.++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~-GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDG-GATVIATTSRLDDDRLAFYKQLYRDHAR-FDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHT-TCEEEEEESCCSHHHHHHHHHHHHHHCC-TTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHC-CCEEEEEeCChhhhhhHHHHHHHHHHhh-cCCeEEEEEecCCCHHHHHHHH
Confidence 378899999999999 999999999999 9999999997654 2222211111 1345778999999999887764
Q ss_pred c-----------cccEEEEecccc----C---C------ccccCChhHHHHHhhhhHHHHHHHHHh----CC--C--cEE
Q 016370 88 K-----------MADLTINLAAIC----T---P------ADYNTRPLDTIYSNFIDALPVVKYCSE----NN--K--RLI 135 (390)
Q Consensus 88 ~-----------~~d~Vih~a~~~----~---~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~--~~v 135 (390)
+ ++|++||+||.. . . ..+....+..+++|+.++..++.++.. .+ . .+|
T Consensus 2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D 2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence 2 379999999971 1 0 011112233478888888877766543 22 1 122
Q ss_pred EeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh--c--CccEEEee
Q 016370 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE--N--GLEFTIVR 211 (390)
Q Consensus 136 ~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~--~~~~~ilR 211 (390)
..+|. ..+.. .....|+.+|...+.+.+.++.+ . ++.+..+.
T Consensus 2291 ~~~ss-~~g~~---------------------------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~ 2336 (3089)
T 3zen_D 2291 LPGSP-NRGMF---------------------------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHAL 2336 (3089)
T ss_dssp EEECS-STTSC---------------------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEE
T ss_pred EECCc-ccccC---------------------------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEe
Confidence 22221 11100 01126999999999999998877 3 47888888
Q ss_pred cceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC--CCCc--eE
Q 016370 212 PFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR--ANGH--IF 287 (390)
Q Consensus 212 ~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~--~~ 287 (390)
||.+-+.... .. ....... ....+. .....+|+|.+++.++..... ..++ ..
T Consensus 2337 PG~v~tT~l~---------~~-~~~~~~~----~~~~~~----------r~~~PeEIA~avlfLaS~~a~~~~~~~p~~v 2392 (3089)
T 3zen_D 2337 IGWTKGTGLM---------GQ-NDAIVSA----VEEAGV----------TTYTTDEMAAMLLDLCTVETKVAAAGAPVKV 2392 (3089)
T ss_dssp CCCEECSTTT---------TT-TTTTHHH----HGGGSC----------BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEE
T ss_pred ecccCCCccc---------cc-chhHHHH----HHhcCC----------CCCCHHHHHHHHHHHhChhhhhHhcCCeEEE
Confidence 8887643221 00 0011111 111110 112789999999987754210 1112 23
Q ss_pred EecCC-CC-cccHHHHHHHHHHH
Q 016370 288 NVGNP-HN-EVTVRQLAEMMTEV 308 (390)
Q Consensus 288 nv~~~-~~-~~s~~~l~~~i~~~ 308 (390)
.++++ .. .+++.++...+++.
T Consensus 2393 dl~GG~~~~~~~~~~~~~~~~~~ 2415 (3089)
T 3zen_D 2393 DLTGGLGDIKIDMAELAAKAREE 2415 (3089)
T ss_dssp ECSBSCSSCCCCHHHHTHHHHHH
T ss_pred EcCCCcCcCCCCHHHHHHHHHHH
Confidence 44454 12 46888888766543
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.80 E-value=3.2e-08 Score=79.12 Aligned_cols=74 Identities=18% Similarity=0.207 Sum_probs=61.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vi 94 (390)
.|++|+|+|+ |.+|+++++.|.++ |++|+++++++.....+.. .++.++.+|.++++.+.++ +.++|+||
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAA-GKKVLAVDKSKEKIELLED-------EGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH-------TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHH-------CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4678999997 99999999999998 9999999998876655443 3678899999999988876 45699999
Q ss_pred Eecc
Q 016370 95 NLAA 98 (390)
Q Consensus 95 h~a~ 98 (390)
.+.+
T Consensus 76 ~~~~ 79 (141)
T 3llv_A 76 ITGS 79 (141)
T ss_dssp ECCS
T ss_pred EecC
Confidence 8764
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.9e-08 Score=95.08 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=77.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
||+|+|+|| |+||+.+++.|.+.++ .+|.+++|+.+....+..........++..+.+|+.|.+++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 579999999 9999999999999833 38999999887655443321111113588999999999999999998 999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEee
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~S 138 (390)
|||+++... ...++++|.+.+++++-++
T Consensus 80 Vin~ag~~~------------------~~~v~~a~l~~g~~vvD~a 107 (405)
T 4ina_A 80 VLNIALPYQ------------------DLTIMEACLRTGVPYLDTA 107 (405)
T ss_dssp EEECSCGGG------------------HHHHHHHHHHHTCCEEESS
T ss_pred EEECCCccc------------------ChHHHHHHHHhCCCEEEec
Confidence 999987421 2467788888887766543
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=6.1e-09 Score=93.98 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=67.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.++++++|||||+|.+|+++++.|.++ |++|++++|+.+....+.+.... ..++.++.+|+++.+++.++++++|+|
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~~~~~~~l~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~Dvl 192 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNK--RFKVNVTAAETADDASRAEAVKGAHFV 192 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHH--HHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEecCCCHHHHHHHHHhCCEE
Confidence 357789999999999999999999999 89999999987654433221100 014567889999999999999999999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
||+++..
T Consensus 193 Vn~ag~g 199 (287)
T 1lu9_A 193 FTAGAIG 199 (287)
T ss_dssp EECCCTT
T ss_pred EECCCcc
Confidence 9999754
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.9e-08 Score=92.73 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=75.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||+|.|| |++|+.+++.|.+ .++|.+.++.....+.+. +.+..+..|+.|.+.+.++++++|+||+++
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~--~~~v~~~~~~~~~~~~~~--------~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD--EFDVYIGDVNNENLEKVK--------EFATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT--TSEEEEEESCHHHHHHHT--------TTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cEEEEECC-CHHHHHHHHHHhc--CCCeEEEEcCHHHHHHHh--------ccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 68999998 9999999999875 489999999877666543 356778899999999999999999999998
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEee
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~S 138 (390)
+... ...++++|.+.|+++|=+|
T Consensus 86 p~~~------------------~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 86 PGFL------------------GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CGGG------------------HHHHHHHHHHHTCEEEECC
T ss_pred CCcc------------------cchHHHHHHhcCcceEeee
Confidence 5320 2368889999998887665
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.3e-07 Score=75.11 Aligned_cols=98 Identities=19% Similarity=0.169 Sum_probs=71.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih 95 (390)
+|+|+|+|+ |++|+.+++.|.+. |++|+++++++.....+... .++.++.+|..+.+.+... +.++|+||+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~------~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAE------IDALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH------CSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHh------cCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 479999986 99999999999998 89999999987655443321 2567788999988877655 677999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
+... . ..| ..++..++..+ .++|..++
T Consensus 76 ~~~~---------~----~~~----~~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 76 VTGK---------E----EVN----LMSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp CCSC---------H----HHH----HHHHHHHHHTTCCCEEEECS
T ss_pred eeCC---------c----hHH----HHHHHHHHHcCCCEEEEEec
Confidence 9641 1 122 24556677777 67776544
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=9.4e-07 Score=71.75 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~ 92 (390)
...+++|+|+|+ |.+|..+++.|.+. |++|++++|++.....+.. ..++.++.+|..+.+.+..+ +.++|+
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~------~~g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS------EFSGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT------TCCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh------cCCCcEEEecCCCHHHHHHcCcccCCE
Confidence 345679999995 99999999999998 8999999998776654431 13567788999888877766 678999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||.+.+
T Consensus 88 Vi~~~~ 93 (155)
T 2g1u_A 88 VFAFTN 93 (155)
T ss_dssp EEECSS
T ss_pred EEEEeC
Confidence 999875
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=90.17 Aligned_cols=80 Identities=15% Similarity=0.252 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+++++|+|+|+ |++|+.+++.|.+.++++|++++|+.+....+... .++..+.+|+.|.+++.++++++|+|
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~------~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP------SGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG------GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh------cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 456789999997 99999999999997678999999987765544331 24677889999998999999999999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
||+++..
T Consensus 93 In~tp~~ 99 (467)
T 2axq_A 93 ISLIPYT 99 (467)
T ss_dssp EECSCGG
T ss_pred EECCchh
Confidence 9998754
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=6e-07 Score=81.67 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=78.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC---hhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH---DSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d---~~~~~~~~~~~d~ 92 (390)
|||.|+||+|++|+.++..|+.. + .+|.++++.+.... ..+.... ... +++.. ..+++++++++|+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~-~~~~ev~L~Di~~~~~~-a~dL~~~--~~~-----~~l~~~~~t~d~~~a~~~aDv 71 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAHTPGV-AADLSHI--ETR-----ATVKGYLGPEQLPDCLKGCDV 71 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSSHHHH-HHHHTTS--SSS-----CEEEEEESGGGHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEeCCccHHH-HHHHhcc--CcC-----ceEEEecCCCCHHHHhCCCCE
Confidence 68999999999999999999987 6 78999999772111 1111000 001 12222 2457888899999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||++++.... ........+..|+..++.+++.+.+.. .++|++|-
T Consensus 72 Vvi~ag~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 72 VVIPAGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp EEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EEECCCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 9999987642 223344667899999999999988877 57777653
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.50 E-value=9.7e-07 Score=71.47 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~ 92 (390)
|..++|+|+|+ |.+|+++++.|.+. |++|+++++++ .....+... ...++.++.+|.++++.+.++ +.++|+
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~----~~~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQR----LGDNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHH----HCTTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHh----hcCCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 34568999995 99999999999998 99999999974 322222111 024789999999999999887 788999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||-+..
T Consensus 75 vi~~~~ 80 (153)
T 1id1_A 75 ILALSD 80 (153)
T ss_dssp EEECSS
T ss_pred EEEecC
Confidence 998764
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.42 E-value=7.6e-07 Score=76.40 Aligned_cols=75 Identities=11% Similarity=0.193 Sum_probs=54.6
Q ss_pred CCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC
Q 016370 16 KPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79 (390)
Q Consensus 16 ~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d 79 (390)
.+|+|||||| ||.+|.++++.|.++ |++|+++.|....... ...++.++. +..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~-Ga~V~lv~~~~~~~~~--------~~~~~~~~~--v~s 70 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA-GYEVCLITTKRALKPE--------PHPNLSIRE--ITN 70 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT-TCEEEEEECTTSCCCC--------CCTTEEEEE--CCS
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC-CCEEEEEeCCcccccc--------CCCCeEEEE--HhH
Confidence 4789999999 999999999999999 9999999987532110 013555554 444
Q ss_pred hh----HHHHhhccccEEEEeccccC
Q 016370 80 DS----RLEGLIKMADLTINLAAICT 101 (390)
Q Consensus 80 ~~----~~~~~~~~~d~Vih~a~~~~ 101 (390)
.+ .+...+.++|++||+||...
T Consensus 71 ~~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 71 TKDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCcccc
Confidence 43 33444556999999999764
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1.4e-07 Score=86.23 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=77.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC--e-----EEEEecCCh--hhhcc-ccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH--K-----ILALDVYND--KIKHL-LEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~--~-----V~~~~r~~~--~~~~~-~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
.+|||+||||+|+||++++..|... +. + ++++++.+. ..+.. .+.... ...-. .++.......+
T Consensus 2 ~~~kV~V~GaaG~VG~~la~~L~~~-~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~-~~~~~----~~~~~~~~~~~ 75 (333)
T 5mdh_A 2 EPIRVLVTGAAGQIAYSLLYSIGNG-SVFGKDQPIILVLLDITPMMGVLDGVLMELQDC-ALPLL----KDVIATDKEEI 75 (333)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTT-TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT-CCTTE----EEEEEESCHHH
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCccccCCCEEEEEeCCCccccchhhHhhhHhh-hhccc----CCEEEcCCcHH
Confidence 3579999999999999999999876 43 4 888888642 11110 010000 00111 12222344667
Q ss_pred hhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C--cEEEeec
Q 016370 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K--RLIHFST 139 (390)
Q Consensus 86 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~--~~v~~Ss 139 (390)
.++++|+|||+||... ....+....++.|+..++++++.+.+++ . +++.+|-
T Consensus 76 ~~~daDvVvitAg~pr--kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 76 AFKDLDVAILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp HTTTCSEEEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HhCCCCEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 7889999999998653 2233455678899999999999999988 3 5777764
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=2e-06 Score=73.60 Aligned_cols=75 Identities=12% Similarity=0.217 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC
Q 016370 14 PIKPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 14 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~ 77 (390)
.+.+|+|||||| ||.+|.++++.|.++ |++|+++.+... .. . ..+++ ..|+
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~-Ga~V~l~~~~~~-l~---~------~~g~~--~~dv 71 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR-GANVTLVSGPVS-LP---T------PPFVK--RVDV 71 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT-TCEEEEEECSCC-CC---C------CTTEE--EEEC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC-CCEEEEEECCcc-cc---c------CCCCe--EEcc
Confidence 478899999999 699999999999999 999999887642 11 0 12333 4577
Q ss_pred CChhHHHHh----hccccEEEEeccccC
Q 016370 78 KHDSRLEGL----IKMADLTINLAAICT 101 (390)
Q Consensus 78 ~d~~~~~~~----~~~~d~Vih~a~~~~ 101 (390)
.+.+++.+. +.++|++||+||...
T Consensus 72 ~~~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 72 MTALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp CSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred CcHHHHHHHHHHhcCCCCEEEECCcccC
Confidence 776555443 345999999999764
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.2e-06 Score=72.74 Aligned_cols=72 Identities=11% Similarity=0.162 Sum_probs=60.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
|+|+|+|+ |.+|+++++.|.++ |++|+++++++.....+.+. .++.++.+|.++.+.+.++ +.++|+||-+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKK------LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHH------SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHH------cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 68999996 99999999999998 99999999988766554321 3678999999999999886 6779999966
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 73 ~ 73 (218)
T 3l4b_C 73 T 73 (218)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.27 E-value=4.1e-06 Score=69.89 Aligned_cols=76 Identities=9% Similarity=0.105 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh--hccccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL--IKMADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~--~~~~d~ 92 (390)
+.+++|+|+| .|.+|..+++.|.+..|++|+++++++.....+.. .++.++.+|..+.+.+.++ +.++|+
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-------~g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-------EGRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-------TTCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-------CCCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 4457899998 59999999999987526999999998876655433 3678889999999888887 778999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||.+..
T Consensus 109 vi~~~~ 114 (183)
T 3c85_A 109 VLLAMP 114 (183)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 998764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.26 E-value=2.4e-05 Score=72.00 Aligned_cols=85 Identities=9% Similarity=-0.051 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHH-hhCCCeEEEEecCChhhhccc-----------cccccCCCCCeeEEeCCCCChhH
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKIL-LETPHKILALDVYNDKIKHLL-----------EPESQTGADRIQFHRLNIKHDSR 82 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~-~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~i~~~~~D~~d~~~ 82 (390)
..+|++|||||+.-+|.+.+..|. +. |..|+++.+......... .......+.....+.+|+.+.+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~-GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGY-GAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhC-CCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 467999999999999999999987 56 899998887653322110 00000123567889999999988
Q ss_pred HHHhhc-------cccEEEEecccc
Q 016370 83 LEGLIK-------MADLTINLAAIC 100 (390)
Q Consensus 83 ~~~~~~-------~~d~Vih~a~~~ 100 (390)
+.+++. ++|++||.+|..
T Consensus 127 i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 127 KAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEecccc
Confidence 887775 389999999975
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.21 E-value=4.1e-06 Score=76.74 Aligned_cols=114 Identities=14% Similarity=0.138 Sum_probs=77.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
=|.+|||.|+|++|+||+.++..|+.. | .+|++++....+.+. +.... . .. .++.-..++.+++
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~-g~~~evvLiDi~~~k~~g~a~DL~~~~---~-~~-----~~i~~t~d~~~al 74 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMM-RLTPNLCLYDPFAVGLEGVAEEIRHCG---F-EG-----LNLTFTSDIKEAL 74 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHT-TCCSCEEEECSCHHHHHHHHHHHHHHC---C-TT-----CCCEEESCHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhc-CCCCEEEEEeCCchhHHHHHHhhhhCc---C-CC-----CceEEcCCHHHHh
Confidence 457789999999999999999999988 6 589999987654332 11110 0 00 1222123566778
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--Cc-EEEeec
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KR-LIHFST 139 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~-~v~~Ss 139 (390)
+++|+||.+||... .........+..|+...+.+++.+.+.+ .. ++.+|-
T Consensus 75 ~dADvVvitaG~p~--kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 75 TDAKYIVSSGGAPR--KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp TTEEEEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred CCCCEEEEccCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 89999999998653 2233455678899999999999998887 33 566653
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.14 E-value=6.6e-06 Score=65.42 Aligned_cols=72 Identities=18% Similarity=0.231 Sum_probs=61.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
++|+|+|+ |.+|+.+++.|.+. |++|+++++++.....+.. .++.++.+|.++++.+.++ +.++|+||-+
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~-------~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRE-------RGVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHH-------TTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEECc-CHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHH-------cCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 47999995 99999999999998 9999999999877665543 4788999999999988775 5679999977
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
..
T Consensus 79 ~~ 80 (140)
T 3fwz_A 79 IP 80 (140)
T ss_dssp CS
T ss_pred CC
Confidence 64
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=98.14 E-value=5.2e-06 Score=76.36 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-----CCeEEEEecCChhhhccccccccCCC-CCeeEEeCCCCChhHHHHhhc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-----PHKILALDVYNDKIKHLLEPESQTGA-DRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~-~~i~~~~~D~~d~~~~~~~~~ 88 (390)
|.||||+|.||||++|+.|++.|++++ ..+++.+.++.+..+.+......... ..+.+. |+ +.+ .+.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~~----~~~ 79 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EAA----VLG 79 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CHH----HHT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-CHH----Hhc
Confidence 456899999999999999999999884 46787776543221111110000000 111111 22 222 245
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEV 142 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~v 142 (390)
++|+||.+.+... +..++..+ +.|.++|-+|+..-
T Consensus 80 ~~DvVf~alg~~~------------------s~~~~~~~-~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 80 GHDAVFLALPHGH------------------SAVLAQQL-SPETLIIDCGADFR 114 (352)
T ss_dssp TCSEEEECCTTSC------------------CHHHHHHS-CTTSEEEECSSTTT
T ss_pred CCCEEEECCCCcc------------------hHHHHHHH-hCCCEEEEECCCcc
Confidence 8999999886431 45667777 77788999998653
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=3.8e-05 Score=69.85 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=77.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.+|||.|+|+ |++|+.++..|... |. +|+++++.+...+. +... .......+.+...| .+.+++
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~-~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~-------~~a~~~ 73 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQ-GITDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGT-------YEDCKD 73 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEEC-------GGGGTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCc-------HHHhCC
Confidence 4579999996 99999999999998 65 89999997654432 2211 01011234444333 245788
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+|+||.++|... ....+....+..|+...+.+++.+.+.. ..++.+|-
T Consensus 74 aDvVvi~ag~p~--kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 74 ADIVCICAGANQ--KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCEEEEecccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 999999998643 2233455678899999999999998887 45665553
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.6e-05 Score=70.33 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhc--cccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKH--LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~--~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|+|+||.|+|++|.+|+.+++.+.+.+++++.++ +|..+.... .... .++. . ++.-.+++.+++.++|
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel------~g~~--~-gv~v~~dl~~ll~~~D 75 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAF------LGKQ--T-GVALTDDIERVCAEAD 75 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTT------TTCC--C-SCBCBCCHHHHHHHCS
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHH------hCCC--C-CceecCCHHHHhcCCC
Confidence 6789999999999999999999998878887774 665432110 0000 0111 0 2333345677777899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
+||++.. | ..+...++.|.++|+++|..+|
T Consensus 76 VVIDfT~----------p--------~a~~~~~~~al~~G~~vVigTT 105 (272)
T 4f3y_A 76 YLIDFTL----------P--------EGTLVHLDAALRHDVKLVIGTT 105 (272)
T ss_dssp EEEECSC----------H--------HHHHHHHHHHHHHTCEEEECCC
T ss_pred EEEEcCC----------H--------HHHHHHHHHHHHcCCCEEEECC
Confidence 9999862 1 1245667778888877775443
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=5.8e-06 Score=73.44 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=46.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
+++|||+|+|++|.+|+.+++.+.+.++++++++ ++.++... ..... .++. ..++...+++.+++.++|
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~------~g~~--~~~v~~~~dl~~~l~~~D 74 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL------AGAG--KTGVTVQSSLDAVKDDFD 74 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS------SSSS--CCSCCEESCSTTTTTSCS
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHH------cCCC--cCCceecCCHHHHhcCCC
Confidence 3457999999999999999999987768998754 55432211 11000 0000 011111223445556799
Q ss_pred EEEEecc
Q 016370 92 LTINLAA 98 (390)
Q Consensus 92 ~Vih~a~ 98 (390)
+||+++.
T Consensus 75 vVIDft~ 81 (273)
T 1dih_A 75 VFIDFTR 81 (273)
T ss_dssp EEEECSC
T ss_pred EEEEcCC
Confidence 9999874
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.5e-05 Score=67.24 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=65.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHH---HHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL---EGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~---~~~~~--~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.......+. +... ..|..+.+.. .+... ++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~-------g~~~-~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRL-------GVEY-VGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTT-------CCSE-EEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-------CCCE-EeeCCcHHHHHHHHHHhCCCCC
Confidence 5689999999999999999999998 89999999987655443321 2222 2355554433 33332 49
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
|+||++++.. .....++.++.. .++|.+++..
T Consensus 109 D~vi~~~g~~------------------~~~~~~~~l~~~-G~~v~~g~~~ 140 (198)
T 1pqw_A 109 DVVLNSLAGE------------------AIQRGVQILAPG-GRFIELGKKD 140 (198)
T ss_dssp EEEEECCCTH------------------HHHHHHHTEEEE-EEEEECSCGG
T ss_pred eEEEECCchH------------------HHHHHHHHhccC-CEEEEEcCCC
Confidence 9999998621 023344444444 4888887744
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.91 E-value=3.4e-05 Score=67.00 Aligned_cols=70 Identities=14% Similarity=-0.014 Sum_probs=59.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
++|+|+|+ |.+|+.+++.|.+. |+ |+++++++.....+. .++.++.+|.++.+.+..+ +.++|+||-+
T Consensus 10 ~~viI~G~-G~~G~~la~~L~~~-g~-v~vid~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 10 RHVVICGW-SESTLECLRELRGS-EV-FVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp CEEEEESC-CHHHHHHHHHSTTS-EE-EEEESCGGGHHHHHH--------TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CEEEEECC-ChHHHHHHHHHHhC-Ce-EEEEECCHHHHHHHh--------cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 58999997 99999999999998 89 999999876554332 2688999999999999877 7889999976
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
..
T Consensus 79 ~~ 80 (234)
T 2aef_A 79 LE 80 (234)
T ss_dssp CS
T ss_pred CC
Confidence 53
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.90 E-value=2.2e-05 Score=72.54 Aligned_cols=102 Identities=10% Similarity=0.098 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|+++||.|.||+|++|+.+++.|.+.+..+++++.+..+....+.... .. ..+.. ..|+.-.+ .+.+.++|+||
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~-~~-~~~~v--~~dl~~~~--~~~~~~vDvVf 87 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVF-PH-LRAQK--LPTLVSVK--DADFSTVDAVF 87 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHC-GG-GTTSC--CCCCBCGG--GCCGGGCSEEE
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhC-ch-hcCcc--cccceecc--hhHhcCCCEEE
Confidence 455799999999999999999999986678888876543221111000 00 00100 13433222 34556899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
.+++... +...+..+ +.|.++|-.|+..
T Consensus 88 ~atp~~~------------------s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 88 CCLPHGT------------------TQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp ECCCTTT------------------HHHHHHTS-CTTCEEEECSSTT
T ss_pred EcCCchh------------------HHHHHHHH-hCCCEEEECCccc
Confidence 9886431 44566666 6677888888853
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.8e-05 Score=71.49 Aligned_cols=100 Identities=12% Similarity=0.034 Sum_probs=62.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+|+||.|.||+|++|+.+++.|.+.+..+++.+.+..+....+...... ..+. ....+.+.+ + +.++|+||.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~--~~g~--~~~~~~~~~---~-~~~vDvV~~ 74 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPN--LRGR--TNLKFVPPE---K-LEPADILVL 74 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGG--GTTT--CCCBCBCGG---G-CCCCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCch--hcCc--ccccccchh---H-hcCCCEEEE
Confidence 3579999999999999999999987667888877644332221110000 0010 011122222 2 468999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+++.. .+..++..+.+.|+++|-.|+..
T Consensus 75 a~g~~------------------~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 75 ALPHG------------------VFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp CCCTT------------------HHHHTHHHHHTTCSEEEECSSTT
T ss_pred cCCcH------------------HHHHHHHHHHHCCCEEEEcCccc
Confidence 88633 14456666677788899998853
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=4.5e-05 Score=69.29 Aligned_cols=112 Identities=18% Similarity=0.171 Sum_probs=67.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
...+|||.|+|+ |.+|+.++..|... +. ++.++++.+...+. +.... .....+.+..+| .+.+
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~-~~~~el~l~D~~~~k~~g~a~DL~~~~--~~~~~~~i~~~~-------~~a~ 74 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQ-GIAQEIGIVDIFKDKTKGDAIDLEDAL--PFTSPKKIYSAE-------YSDA 74 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHTTG--GGSCCCEEEECC-------GGGG
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhC-CCCCeEEEEeCChHHHHHHHhhHhhhh--hhcCCcEEEECc-------HHHh
Confidence 456789999996 99999999999998 65 89999997654331 11110 011234444332 2457
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+++|+||.+||... ....+....+..|+.-.+.+++.+.++. ..++.+|
T Consensus 75 ~~aDiVvi~ag~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 75 KDADLVVITAGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp TTCSEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred cCCCEEEECCCCCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 88999999998653 2223344567889999999999998887 5555555
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.1e-05 Score=68.89 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=51.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|+|+||+|++|+.+++.|.+. |++|++++|+++....+.+... ..+. ..|+. .+++.++++++|+||++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~~~~----~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKAAEYR----RIAG--DASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHHHHHH----HHHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhc----cccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence 58999999999999999999998 8999999998765443322100 0000 02232 234667778899999987
Q ss_pred c
Q 016370 98 A 98 (390)
Q Consensus 98 ~ 98 (390)
.
T Consensus 73 ~ 73 (212)
T 1jay_A 73 P 73 (212)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=4.5e-05 Score=71.91 Aligned_cols=73 Identities=21% Similarity=0.193 Sum_probs=62.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih 95 (390)
.++|+|+|. |-+|+.+++.|.+. |++|+++++++.....+.. .++.++.||.++.+.++.+ +.++|+||-
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~-------~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHH-------TTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHh-------CCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 468999995 99999999999998 9999999999887665543 3788999999999999887 677999997
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+..
T Consensus 75 ~~~ 77 (413)
T 3l9w_A 75 AID 77 (413)
T ss_dssp CCS
T ss_pred CCC
Confidence 663
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.76 E-value=3e-05 Score=72.21 Aligned_cols=106 Identities=14% Similarity=0.212 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|+ |-||..+++.|... |++|++++|++.....+.+.. +.. +.+|..+.+.+.++++++|+|
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~------g~~-~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVF------GGR-VITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT------TTS-EEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhc------Cce-EEEecCCHHHHHHHHhCCCEE
Confidence 467799999999 99999999999998 999999999876654432211 111 345677788899999999999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
|++++..... .+ ...+...++.++. +..+|.+|+.
T Consensus 234 i~~~g~~~~~----~~-------~li~~~~l~~mk~-gg~iV~v~~~ 268 (369)
T 2eez_A 234 IGAVLVPGAK----AP-------KLVTRDMLSLMKE-GAVIVDVAVD 268 (369)
T ss_dssp EECCC------------------CCSCHHHHTTSCT-TCEEEECC--
T ss_pred EECCCCCccc----cc-------hhHHHHHHHhhcC-CCEEEEEecC
Confidence 9998754200 00 0112334444432 3688888864
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00013 Score=65.85 Aligned_cols=114 Identities=11% Similarity=0.088 Sum_probs=74.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh-C-CCeEEEEecCChhhhc-cccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE-T-PHKILALDVYNDKIKH-LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~-~-g~~V~~~~r~~~~~~~-~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|||.|+||+|.||+.++..|..+ + ..++.+++..+ .... ..+... ......+... .. ....+.++++|+||
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~--~~~~~~v~~~-~~--~~~~~~~~~aDivi 74 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH--IPTAVKIKGF-SG--EDATPALEGADVVL 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHT--SCSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhC--CCCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence 68999999999999999999875 2 35799999876 2111 111100 1112222110 00 12345678899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
-+||... ....+..+.+..|+.-.+.+.+.+.++. ..++.+|-
T Consensus 75 i~ag~~r--kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN 119 (312)
T 3hhp_A 75 ISAGVAR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (312)
T ss_dssp ECCSCSC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 9998653 2334566788899999999999888877 45666653
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=9.6e-05 Score=67.78 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=57.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|||+|.||+|++|+.+++.|+++ +..+++.+....+..+.+. ..+......|+ +.+ .+.++|+||-
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-------~~g~~i~~~~~-~~~----~~~~~DvV~~ 74 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-------FAESSLRVGDV-DSF----DFSSVGLAFF 74 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-------ETTEEEECEEG-GGC----CGGGCSEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-------cCCcceEEecC-CHH----HhcCCCEEEE
Confidence 68999999999999999999965 3456666643221111110 01112211122 122 2468999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+.+.. .+..++..+.+.|.++|-+|+..
T Consensus 75 a~g~~------------------~s~~~a~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 75 AAAAE------------------VSRAHAERARAAGCSVIDLSGAL 102 (340)
T ss_dssp CSCHH------------------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred cCCcH------------------HHHHHHHHHHHCCCEEEEeCCCC
Confidence 87622 14566777778887788888764
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=5.3e-05 Score=68.84 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhc----cccccccCCCCCeeEE-eCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKH----LLEPESQTGADRIQFH-RLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~-~~D~~d~~~~~~~~ 87 (390)
.|++|||.|+|+ |.+|..++..|... |+ +|+++++.+...+. +...... .....++. ..| . +++
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~-~~~~v~L~Di~~~~~~g~~~dl~~~~~~-~~~~~~v~~t~d------~-~a~ 73 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLK-ELGDVVLFDIAEGTPQGKGLDIAESSPV-DGFDAKFTGAND------Y-AAI 73 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHT-TCCEEEEECSSSSHHHHHHHHHHHHHHH-HTCCCCEEEESS------G-GGG
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhC-CCCeEEEEeCCchhHHHHHHHHhchhhh-cCCCCEEEEeCC------H-HHH
Confidence 467789999998 99999999999988 77 99999998754321 1110000 00122222 122 2 567
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+++|+||.+++... ....+....+..|+.-.+.+++.+.+.. ..+|.+|-
T Consensus 74 ~~aDiVIiaag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 74 EGADVVIVTAGVPR--KPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp TTCSEEEECCSCCC--C-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCEEEEccCcCC--CCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 88999999998653 2223344567789999999999888877 56666663
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00023 Score=64.61 Aligned_cols=113 Identities=16% Similarity=0.141 Sum_probs=76.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
|++|||.|+| +|.+|..++..|... +. +|+++++.+...+. +...... .....++.-. .| .+++++
T Consensus 3 m~~~kI~iiG-aG~vG~~~a~~l~~~-~~~~v~l~Di~~~~~~g~a~dL~~~~~~-~~~~~~v~~t--~d----~~a~~~ 73 (321)
T 3p7m_A 3 MARKKITLVG-AGNIGGTLAHLALIK-QLGDVVLFDIAQGMPNGKALDLLQTCPI-EGVDFKVRGT--ND----YKDLEN 73 (321)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECSSSSHHHHHHHHHHTTHHH-HTCCCCEEEE--SC----GGGGTT
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC-CCceEEEEeCChHHHHHHHHHHHhhhhh-cCCCcEEEEc--CC----HHHHCC
Confidence 5678999999 599999999999987 66 99999998754331 1110000 0012222211 12 246788
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+|+||.+++... ....+....+..|+...+.+++.+.+.. ..+|.+|
T Consensus 74 aDvVIi~ag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 74 SDVVIVTAGVPR--KPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp CSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCEEEEcCCcCC--CCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 999999998653 2233455677889999999999888877 5666665
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00019 Score=66.31 Aligned_cols=101 Identities=10% Similarity=0.017 Sum_probs=59.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCC-------CCCeeEEeCCCCChhHHHHhhc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTG-------ADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~-------~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
++||.|.||+|++|+.+++.|.+.++++|+++.+++. ..+.+........ ...+.+... +.+ +++.
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~ 81 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPK---HEEF 81 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTT---SGGG
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHH---HHhc
Confidence 3699999999999999999999876788888865321 1111100000000 001111111 222 2345
Q ss_pred -cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 89 -MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
++|+||-+.+.. .+..++..+.+.|+++|-.|+..
T Consensus 82 ~~~DvV~~atp~~------------------~~~~~a~~~~~aG~~VId~s~~~ 117 (354)
T 1ys4_A 82 EDVDIVFSALPSD------------------LAKKFEPEFAKEGKLIFSNASAY 117 (354)
T ss_dssp TTCCEEEECCCHH------------------HHHHHHHHHHHTTCEEEECCSTT
T ss_pred CCCCEEEECCCch------------------HHHHHHHHHHHCCCEEEECCchh
Confidence 799999887522 13445666667787788777753
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00037 Score=62.42 Aligned_cols=111 Identities=18% Similarity=0.167 Sum_probs=76.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|||.|+|+ |.+|..++..|... |+ +|.++++.+...+. +.+. ........++.-. .| .++++++|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~-~~~~~v~L~D~~~~~~~g~~~dl~~~-~~~~~~~~~i~~t--~d----~~a~~~aD 71 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLN-LDVDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGG--AD----YSLLKGSE 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-SCCSEEEEECSSHHHHHHHHHHHHHH-HHTTTCCCEEEEE--SC----GGGGTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCeEEEEECChHHHHHHHHHHHhh-hhhcCCCCEEEEe--CC----HHHhCCCC
Confidence 68999999 99999999999988 76 89999998765431 1110 0001112222211 11 45678899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+||.+++... ....+....+..|+.-.+.+++.+.+.+ ..++.+|-
T Consensus 72 iVViaag~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 72 IIVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEECCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9999998653 2233455678889999999999998887 56666663
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0003 Score=64.32 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=60.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+|+||.|.||+|++|+.+++.|+++ +.++++++....+..+.+. . ....+.+. |+. ++ .+.++|+|
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~----~~~~i~~~--~~~-~~----~~~~vDvV 69 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-F----NGKTVRVQ--NVE-EF----DWSQVHIA 69 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-E----TTEEEEEE--EGG-GC----CGGGCSEE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-e----cCceeEEe--cCC-hH----HhcCCCEE
Confidence 4689999999999999999999987 5577777764322111110 0 01122222 221 11 33579999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
|-+.+.. .+...+..+.+.|.++|-.|+..
T Consensus 70 f~a~g~~------------------~s~~~a~~~~~~G~~vId~s~~~ 99 (336)
T 2r00_A 70 LFSAGGE------------------LSAKWAPIAAEAGVVVIDNTSHF 99 (336)
T ss_dssp EECSCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred EECCCch------------------HHHHHHHHHHHcCCEEEEcCCcc
Confidence 9887632 14556666777787888888764
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0001 Score=68.01 Aligned_cols=74 Identities=16% Similarity=0.137 Sum_probs=53.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-----MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-----~~ 90 (390)
.+++|||+||+|-||..+++.+... |.+|+++++++.......+. +... ..|+.+.+++.+.+. ++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~-------g~~~-~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI-------GGEV-FIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT-------TCCE-EEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc-------CCce-EEecCccHhHHHHHHHHhCCCC
Confidence 5689999999999999999999988 89999999887665443331 2222 236664333433332 59
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||++++
T Consensus 240 D~vi~~~g 247 (347)
T 2hcy_A 240 HGVINVSV 247 (347)
T ss_dssp EEEEECSS
T ss_pred CEEEECCC
Confidence 99999987
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00024 Score=64.80 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=61.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC---hhhhccccccccCCC-CCeeEEeCCCCChhHHHHhhccccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGA-DRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~-~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|+||.|.||||++|+.|++.|.+.+.+++..+..+. +.-+.+.+....... ....+... .+. .+++.++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~---~~~~~~~Dv 78 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDI---SEFSPGVDV 78 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSG---GGTCTTCSE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCH---HHHhcCCCE
Confidence 579999999999999999999987788988876544 221111100000000 01222111 012 233367999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
||-|.+.. .+..++..+.+.|.++|=.|+..
T Consensus 79 vf~a~p~~------------------~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 79 VFLATAHE------------------VSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp EEECSCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred EEECCChH------------------HHHHHHHHHHHCCCEEEEcCCcc
Confidence 99876521 14456666667788899999864
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0001 Score=67.62 Aligned_cols=74 Identities=20% Similarity=0.165 Sum_probs=52.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh----c-cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI----K-MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~----~-~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.......+. +... ..|..+.+++.+.+ . ++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~-------g~~~-~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI-------GFDA-AFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-------TCSE-EEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-------CCcE-EEecCCHHHHHHHHHHHhCCCC
Confidence 5689999999999999999999988 99999999987665544221 2221 23665522233322 2 49
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||+++|
T Consensus 216 d~vi~~~g 223 (333)
T 1v3u_A 216 DCYFDNVG 223 (333)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999997
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=65.37 Aligned_cols=83 Identities=14% Similarity=0.181 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecC---ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVY---NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.+.++++||+|+ |-+|+.++..|.+. |. +|+++.|+ .+..+.+....... .++.+...++.+.+++.+.+.+
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~-Ga~~V~i~nR~~~~~~~a~~la~~~~~~--~~~~~~~~~~~~~~~l~~~l~~ 226 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALD-GVKEISIFNRKDDFYANAEKTVEKINSK--TDCKAQLFDIEDHEQLRKEIAE 226 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHH--SSCEEEEEETTCHHHHHHHHHT
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHC-CCCEEEEEECCCchHHHHHHHHHHhhhh--cCCceEEeccchHHHHHhhhcC
Confidence 467899999997 78999999999998 87 89999998 44443332211110 1233444567777778888889
Q ss_pred ccEEEEecccc
Q 016370 90 ADLTINLAAIC 100 (390)
Q Consensus 90 ~d~Vih~a~~~ 100 (390)
+|+||++....
T Consensus 227 aDiIINaTp~G 237 (315)
T 3tnl_A 227 SVIFTNATGVG 237 (315)
T ss_dssp CSEEEECSSTT
T ss_pred CCEEEECccCC
Confidence 99999987543
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00074 Score=61.71 Aligned_cols=175 Identities=14% Similarity=-0.004 Sum_probs=102.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC------CeEEEEecCChhh--hcc-ccccccCCCCCeeEEeCCCCChhHHH
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP------HKILALDVYNDKI--KHL-LEPESQTGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g------~~V~~~~r~~~~~--~~~-~~~~~~~~~~~i~~~~~D~~d~~~~~ 84 (390)
.|...||.|+||+|.||+.|+..|...+= .++.+++..+... +.. .++..-........+.+ .+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~-----~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT-----ADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE-----SCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc-----CChH
Confidence 45566999999999999999998887521 2688888765311 110 00000000111222222 2346
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecc---cccccccCCCCCCCCCCC
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTC---EVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~---~vy~~~~~~~~~e~~~~~ 158 (390)
++++++|+||-+||... .......+.+..|..-.+.+.+...++. .+++.+|-- .+|-... ....
T Consensus 96 ~a~~~advVvi~aG~pr--kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~-----~~~g-- 166 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR--KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLK-----SAQG-- 166 (345)
T ss_dssp HHTTTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHH-----HTTT--
T ss_pred HHhCCCCEEEECCCCCC--CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHH-----HccC--
Confidence 67899999999999764 3344566788999999999999887753 455666631 1110000 0000
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCC
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 221 (390)
.+.++..-+.+.+..-++-...+++.+++...++-..|.|.+.+
T Consensus 167 -------------------~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~ 210 (345)
T 4h7p_A 167 -------------------KLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS 210 (345)
T ss_dssp -------------------CSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred -------------------CCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence 00133345555565556655566666877666665667776544
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00061 Score=62.04 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=74.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
+.+.|||.|+|| |.+|..++..|+.. +. ++.++++.+...+. +.+.. .....+.+.. | + .+++
T Consensus 6 ~~~~~KI~IiGa-G~vG~~la~~l~~~-~~~~el~L~Di~~~~~~g~~~dl~~~~--~~~~~~~i~~-~--~----~~a~ 74 (326)
T 2zqz_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQ-GIAQEIGIVDIFKDKTKGDAIDLSNAL--PFTSPKKIYS-A--E----YSDA 74 (326)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHTTG--GGSCCCEEEE-C--C----GGGG
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHcC-CCCCEEEEEeCCchHhHHHHHHHHHHH--HhcCCeEEEE-C--C----HHHh
Confidence 345589999998 99999999999887 54 79999997654432 11110 0112333332 1 2 3457
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+++|+||.+++... .........+..|+...+.+++.+.++. ..+|.+|
T Consensus 75 ~~aDvVii~ag~~~--k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 75 KDADLVVITAGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp GGCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred CCCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 88999999998653 2223344567788888999998888777 5666664
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00014 Score=67.10 Aligned_cols=100 Identities=9% Similarity=0.095 Sum_probs=60.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCC--------CCCeeEEeCCCCChhHHHHh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTG--------ADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~--------~~~i~~~~~D~~d~~~~~~~ 86 (390)
+++||.|.||+|++|+.+++.|.+.+..++.++. .+.+....+.+.. ... ...+.+ .|+ +.+.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~--~~~-d~~~---- 74 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAV-KWIEQGDIPEEVQDLPI--VST-NYED---- 74 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHC-CCCSSSSCCHHHHTCBE--ECS-SGGG----
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhc-CcccccccccCCceeEE--eeC-CHHH----
Confidence 4579999999999999999999987678888875 2211111110000 000 011122 222 2222
Q ss_pred hccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 87 IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 87 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+.++|+||-+.+.. .+..++..+.+.|.++|-.|+..
T Consensus 75 ~~~vDvVf~atp~~------------------~s~~~a~~~~~aG~~VId~s~~~ 111 (350)
T 2ep5_A 75 HKDVDVVLSALPNE------------------LAESIELELVKNGKIVVSNASPF 111 (350)
T ss_dssp GTTCSEEEECCCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred hcCCCEEEECCChH------------------HHHHHHHHHHHCCCEEEECCccc
Confidence 35799999776421 14556777778887788777753
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00047 Score=62.70 Aligned_cols=114 Identities=17% Similarity=0.156 Sum_probs=77.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
.+.++||.|+|+ |.+|..++..|+.+ |. +|+++++.....+. +.... .......++..+ |. + .+
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~-~~~~el~L~Di~~~~~~g~a~DL~~~~--~~~~~~~i~~~~--d~---~-~~ 85 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMK-DLADELALVDVIEDKLKGEMMDLQHGS--LFLKTPKIVSSK--DY---S-VT 85 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHHHHHTG--GGCSCCEEEECS--SG---G-GG
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhC-CCCceEEEEeCChHHHHHHHHhhhhhh--hccCCCeEEEcC--CH---H-Hh
Confidence 467789999997 99999999999998 65 89999987653332 11100 001111222221 22 2 47
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+++|+||.+||... .........+..|+.-.+.+.+.+.++. ..++.+|-
T Consensus 86 ~~aDiVvi~aG~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 86 ANSKLVIITAGARQ--QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp TTEEEEEECCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCEEEEccCCCC--CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 88999999998753 2334556788899999999999888877 56666663
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00043 Score=60.55 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=70.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccc-------------------ccc-CCCCCeeEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEP-------------------ESQ-TGADRIQFH 73 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~-------------------~~~-~~~~~i~~~ 73 (390)
++.++|+|.|+ |-+|+.+++.|... |. +++++++..-...++.+. ... ...-.++.+
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~-Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASA-GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHH-TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHc-CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 45579999995 78999999999999 75 899999876211111110 000 001134555
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccc
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYG 144 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~ 144 (390)
..++.+ +.+.+++.++|+||.+... ...-..+.++|++.++.+|+.+....+|
T Consensus 107 ~~~~~~-~~~~~~~~~~DvVi~~~d~-----------------~~~~~~l~~~~~~~~~p~i~~~~~g~~g 159 (249)
T 1jw9_B 107 NALLDD-AELAALIAEHDLVLDCTDN-----------------VAVRNQLNAGCFAAKVPLVSGAAIRMEG 159 (249)
T ss_dssp CSCCCH-HHHHHHHHTSSEEEECCSS-----------------HHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred eccCCH-hHHHHHHhCCCEEEEeCCC-----------------HHHHHHHHHHHHHcCCCEEEeeeccceE
Confidence 666653 5577788899999987631 1112345577888788888877654444
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0011 Score=60.18 Aligned_cols=113 Identities=15% Similarity=0.204 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
+|++|||.|+|| |.+|..++..|... + .+|.+++..+..... +... .......+++.. | + .+++
T Consensus 3 ~m~~~KI~IIGa-G~vG~~la~~l~~~-~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~-~--~----~~a~ 72 (317)
T 3d0o_A 3 KFKGNKVVLIGN-GAVGSSYAFSLVNQ-SIVDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKA-G--E----YSDC 72 (317)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHH-CSCSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEE-C--C----GGGG
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEe-C--C----HHHh
Confidence 356689999998 99999999999988 6 489999987643321 1111 000112333332 1 2 4457
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+++|+||-+++... .........+..|+.-.+.+++.+.+.. ..+|.+|
T Consensus 73 ~~aDvVvi~ag~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 73 HDADLVVICAGAAQ--KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCEEEECCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 89999999998753 2223344567788888899998888887 4555544
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00057 Score=62.06 Aligned_cols=111 Identities=16% Similarity=0.207 Sum_probs=68.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcc-ccccc-cCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHL-LEPES-QTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~-~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
++|||.|+|+ |++|..++..|... +. +|.+++..+...... .+... ......+++.. .+ .+.++++|
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~-~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aD 76 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALR-QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCD 76 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHT-TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCC
Confidence 3578999998 99999999999988 66 899999876543321 11000 00112332221 12 34578899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEe
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHF 137 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~ 137 (390)
+||.+++... ............|+...+.+++.+.+.. ..+|.+
T Consensus 77 vVii~~g~p~--k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 77 VIVVTAGANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp EEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred EEEEcCCCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 9999998643 2222344567789998999999888766 455554
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00044 Score=62.59 Aligned_cols=115 Identities=13% Similarity=0.120 Sum_probs=75.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCC--hhhhccc-ccccc-C-CCCCeeEEeCCCCChhHHHHhhc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYN--DKIKHLL-EPESQ-T-GADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~--~~~~~~~-~~~~~-~-~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
|+++||.|+|+ |.+|..++..|... |+ +|+++++.+ ...+... +.... . .....++... .+ .+.++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~-g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d----~~a~~ 77 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQK-ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD----YADTA 77 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHT-TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC----GGGGT
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhC-CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC----HHHhC
Confidence 34579999996 99999999999998 88 999999983 2222110 00000 0 0011122211 11 24678
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
++|+||-++|... .........+..|+.-.+.+++.+.+.+ ..++.+|-
T Consensus 78 ~aDvVIiaag~p~--kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 78 DSDVVVITAGIAR--KPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp TCSEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 8999999998753 2234456778889999999999888877 56666663
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0002 Score=61.17 Aligned_cols=67 Identities=10% Similarity=0.134 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
..+|+|.|+| +|.+|+.+++.|.+. |++|++++|+++....+.. .++... ++.++++++|+||
T Consensus 26 ~~~~~I~iiG-~G~~G~~la~~l~~~-g~~V~~~~r~~~~~~~~~~-------~g~~~~--------~~~~~~~~~DvVi 88 (215)
T 2vns_A 26 DEAPKVGILG-SGDFARSLATRLVGS-GFKVVVGSRNPKRTARLFP-------SAAQVT--------FQEEAVSSPEVIF 88 (215)
T ss_dssp ---CCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESSHHHHHHHSB-------TTSEEE--------EHHHHTTSCSEEE
T ss_pred CCCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-------cCCcee--------cHHHHHhCCCEEE
Confidence 3568999999 899999999999998 8999999998766554432 133331 3556778899999
Q ss_pred Eecc
Q 016370 95 NLAA 98 (390)
Q Consensus 95 h~a~ 98 (390)
.+..
T Consensus 89 ~av~ 92 (215)
T 2vns_A 89 VAVF 92 (215)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 8764
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00048 Score=59.83 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=28.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
|||+|.|++|-+|+.+++.+.+.+++++.++..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d 33 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELD 33 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEc
Confidence 589999999999999999998766899887654
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00063 Score=61.54 Aligned_cols=111 Identities=15% Similarity=0.120 Sum_probs=69.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc-ccccc--CCCCCeeEEe-CCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL-EPESQ--TGADRIQFHR-LNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~-~~~~~--~~~~~i~~~~-~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|| |++|..++..|... |+ +|.++++++...+... +.... ......++.. .| + +.++++|+
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~-g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~ 73 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAK-ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTANSDV 73 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC-CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHCCCCE
Confidence 69999998 99999999999988 75 8999998775443211 10000 0001122221 22 3 45788999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
||.+++....+ ..........|+...+.+++.+.+.. ..+|.+.|
T Consensus 74 Vi~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 74 IVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 99999865321 11223456778888889999888887 54554444
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00032 Score=64.40 Aligned_cols=69 Identities=14% Similarity=0.017 Sum_probs=59.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
++|+|+|+ |.+|+.+++.|.++ |+ |++++++++... +.. .++.++.||.+|++.++++ ++++|+||-+
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~-g~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGS-EV-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGS-CE-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECC-cHHHHHHHHHHHhC-Cc-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 58999996 99999999999998 88 999999887666 432 4789999999999999888 7789999976
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 185 ~ 185 (336)
T 1lnq_A 185 L 185 (336)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0002 Score=66.20 Aligned_cols=74 Identities=19% Similarity=0.189 Sum_probs=53.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH---HHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR---LEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~---~~~~~~--~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.......+. +... ..|..+.+. +.+... ++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------ga~~-~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN-------GAHE-VFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-------TCSE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc-------CCCE-EEeCCCchHHHHHHHHcCCCCc
Confidence 5689999999999999999999988 89999999987665543321 2222 235554433 333333 59
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||+++|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999987
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00015 Score=66.82 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=52.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc-cccccCCCCCeeEEeCCCCCh----hHHHHhh-cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPESQTGADRIQFHRLNIKHD----SRLEGLI-KM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~i~~~~~D~~d~----~~~~~~~-~~ 89 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.....+. +. +... ..|..+. +.+.++. .+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~-------g~~~-~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF-------GFDD-AFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS-------CCSE-EEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCce-EEecCCHHHHHHHHHHHhCCC
Confidence 5689999999999999999999988 899999999876655443 21 2222 1254443 2333332 25
Q ss_pred ccEEEEecc
Q 016370 90 ADLTINLAA 98 (390)
Q Consensus 90 ~d~Vih~a~ 98 (390)
+|+||++++
T Consensus 226 ~d~vi~~~g 234 (345)
T 2j3h_A 226 IDIYFENVG 234 (345)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 999999986
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00016 Score=66.29 Aligned_cols=75 Identities=8% Similarity=0.018 Sum_probs=53.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.....+.+. +... ..|..+.+ .+.+... ++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-------g~~~-~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL-------GCHH-TINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-------TCSE-EEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCCE-EEECCCHHHHHHHHHHhCCCCC
Confidence 5689999999999999999999998 89999999987655544332 1221 23555433 3333332 49
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||+++|.
T Consensus 216 d~vi~~~g~ 224 (333)
T 1wly_A 216 DVVYDSIGK 224 (333)
T ss_dssp EEEEECSCT
T ss_pred eEEEECCcH
Confidence 999999973
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0016 Score=59.47 Aligned_cols=112 Identities=19% Similarity=0.132 Sum_probs=72.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcc-cccc---c-cCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHL-LEPE---S-QTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~-~~~~---~-~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+|||.|+|| |.+|..++..|... |+ +|.+++++++..+.. .... . .....++.. ..+++++++++
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~-g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~a 79 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALR-ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGA 79 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCC
Confidence 469999998 99999999999998 87 999999987544431 1000 0 000111211 13456678899
Q ss_pred cEEEEeccccCCccccC-----ChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 91 DLTINLAAICTPADYNT-----RPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~-----~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
|+||-+++.... ... ........|+.-.+.+++.+.+.. .-++...|
T Consensus 80 DiVi~a~g~p~~--~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 132 (331)
T 1pzg_A 80 DCVIVTAGLTKV--PGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp SEEEECCSCSSC--TTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEccCCCCC--CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 999999976431 111 334556778888888888888776 33433333
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00026 Score=64.65 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhH---HHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR---LEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~---~~~~~~--~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.....+.+. +... ..|..+.+. +.+... ++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA-------GAWQ-VINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-------TCSE-EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-------CCCE-EEECCCccHHHHHHHHhCCCCc
Confidence 5689999999999999999999999 89999999987655544331 1221 235554433 333332 49
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||+++|
T Consensus 211 D~vi~~~g 218 (327)
T 1qor_A 211 RVVYDSVG 218 (327)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999997
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00018 Score=68.91 Aligned_cols=73 Identities=21% Similarity=0.368 Sum_probs=60.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vi 94 (390)
+.|||+|.| .|-+|++|++.|.++ |++|+++++++.....+... -.+..+.||-++++.++++ ++++|++|
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~-~~~v~vId~d~~~~~~~~~~------~~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGE-NNDITIVDKDGDRLRELQDK------YDLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCST-TEEEEEEESCHHHHHHHHHH------SSCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHh------cCcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 458999999 599999999999998 99999999998877665432 2678999999999999887 45699988
Q ss_pred Ee
Q 016370 95 NL 96 (390)
Q Consensus 95 h~ 96 (390)
-+
T Consensus 74 a~ 75 (461)
T 4g65_A 74 AV 75 (461)
T ss_dssp EC
T ss_pred EE
Confidence 43
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00075 Score=62.16 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=56.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
++||.|.||||++|..|++.|.+. +..++..+....+.-+.+.. .+......++.. + .+.++|+||
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~-------~~~~~~~~~~~~-~----~~~~~Dvvf 69 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF-------KDQDITIEETTE-T----AFEGVDIAL 69 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE-------TTEEEEEEECCT-T----TTTTCSEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee-------cCCCceEeeCCH-H----HhcCCCEEE
Confidence 368999999999999999988886 22345555433222111110 111222222221 1 246799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
-+++.. .+...+..+.+.|.++|=.|+..
T Consensus 70 ~a~~~~------------------~s~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 70 FSAGSS------------------TSAKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp ECSCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred ECCChH------------------hHHHHHHHHHHCCCEEEEcCCcc
Confidence 987522 14455666667777888888854
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00079 Score=60.81 Aligned_cols=112 Identities=15% Similarity=0.140 Sum_probs=72.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccc-ccccc--CCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLL-EPESQ--TGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~-~~~~~--~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|+ |.+|+.++..|+.. +. +|+++++.+...+... +.... .......+.-.| + .+.++++|+
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~-~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDv 72 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQ-DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDV 72 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCE
Confidence 68999996 99999999999998 65 8999999875433110 00000 000122332111 1 346788999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||-+||... ....+....+..|+.-.+.+.+.+.++. ..++.+|-
T Consensus 73 Vii~ag~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 73 CIITAGLPR--SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EEECCCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 999998753 2223445677889999999999998887 55666663
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0018 Score=57.77 Aligned_cols=112 Identities=17% Similarity=0.175 Sum_probs=74.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-ccccc-c-CCCCCeeEEe-CCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPES-Q-TGADRIQFHR-LNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~-~-~~~~~i~~~~-~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|| |.||+.++..|+.++- .++.+++..+...+.. .++.. . .......+.. .|. +.++++|+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-------~~~~~aDv 72 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI 72 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-------GGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-------HHhCCCCE
Confidence 79999995 9999999999998732 4799999876432211 00000 0 0011222222 222 24678999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
||-.||... ....+..+.+..|..-.+.+.+.+.+++ ..++.+|-
T Consensus 73 VvitAG~pr--kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 73 IVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEECCCCCC--CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEecCCCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 999999764 3344666788999999999999998888 45555553
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00043 Score=61.43 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=62.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+++||.|.|++|-+|+.+++.+.+.++.++.++ ++..+... ..... .++. ..++.-.+++.+++.++|+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel------~G~~--~~gv~v~~dl~~ll~~aDV 91 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASIL------IGSD--FLGVRITDDPESAFSNTEG 91 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGG------TTCS--CCSCBCBSCHHHHTTSCSE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHh------hccC--cCCceeeCCHHHHhcCCCE
Confidence 446999999999999999999998878887765 55432211 11000 0111 1223233467777889999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
||.+.. | ..+...++.|.++|+.+|..+|
T Consensus 92 vIDFT~----------p--------~a~~~~~~~~l~~Gv~vViGTT 120 (288)
T 3ijp_A 92 ILDFSQ----------P--------QASVLYANYAAQKSLIHIIGTT 120 (288)
T ss_dssp EEECSC----------H--------HHHHHHHHHHHHHTCEEEECCC
T ss_pred EEEcCC----------H--------HHHHHHHHHHHHcCCCEEEECC
Confidence 999863 1 1245566778888877775444
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00095 Score=60.55 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=70.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcc----ccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHL----LEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|||.|+|| |.+|..++..|+.. +. ++.++++.+...+.. .... .....+++.. | + .++++++|
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~-~~~~el~L~Di~~~~~~g~~~dl~~~~--~~~~~~~v~~-~--~----~~a~~~aD 74 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQ-GIAEEFVIVDVVKDRTKGDALDLEDAQ--AFTAPKKIYS-G--E----YSDCKDAD 74 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHGGG--GGSCCCEEEE-C--C----GGGGTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHcC-CCCCEEEEEeCCchHHHHHHHHHHHHH--HhcCCeEEEE-C--C----HHHhCCCC
Confidence 79999998 99999999999988 54 799999976544321 1110 0112333332 1 1 34578899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+||.+++.... ........+..|+...+.+++.+.+.. ..+|.+|
T Consensus 75 vVii~ag~~~~--~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 75 LVVITAGAPQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp EEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 99999987532 122233566789999999999888887 5666664
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00065 Score=64.22 Aligned_cols=95 Identities=13% Similarity=0.255 Sum_probs=64.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC---eEEEEecCChhhhccccccccCCCCCeeEEeCCCCC--h-hHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH---KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH--D-SRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d--~-~~~~~~~~~~d 91 (390)
+||+|.| .|-||+.+++.|.+++++ +|++++....... +.+. .++++...+++. . +.+..++++.|
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-~~~~------~g~~~~~~~Vdadnv~~~l~aLl~~~D 85 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-VAQQ------YGVSFKLQQITPQNYLEVIGSTLEEND 85 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-HHHH------HTCEEEECCCCTTTHHHHTGGGCCTTC
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-HHhh------cCCceeEEeccchhHHHHHHHHhcCCC
Confidence 5799999 999999999999998666 6888876543321 1110 145566666644 3 33566777789
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
+|||++-.. ....++++|.+.|. -|++|+
T Consensus 86 vVIN~s~~~------------------~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 86 FLIDVSIGI------------------SSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp EEEECCSSS------------------CHHHHHHHHHHHTC--EEEESS
T ss_pred EEEECCccc------------------cCHHHHHHHHHcCC--CEEECC
Confidence 999966322 15678999999974 455554
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00022 Score=66.04 Aligned_cols=105 Identities=13% Similarity=0.052 Sum_probs=59.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCC-------CCCeeEEeCCCCChhHHH
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTG-------ADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~-------~~~i~~~~~D~~d~~~~~ 84 (390)
..|+++||.|.||||++|..|++.|.+.+..++..+. ...+.-+.+.+...... .....+...| ..+
T Consensus 15 ~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~--~~~--- 89 (381)
T 3hsk_A 15 SHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECK--PEG--- 89 (381)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESS--SCT---
T ss_pred ccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCc--hhh---
Confidence 4567789999999999999999998887667876553 22111111100000000 0011111111 110
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
.+.++|+||-+.+.. .+..++..+.+.|.++|=.|+..
T Consensus 90 -~~~~~Dvvf~alp~~------------------~s~~~~~~~~~~G~~VIDlSa~f 127 (381)
T 3hsk_A 90 -NFLECDVVFSGLDAD------------------VAGDIEKSFVEAGLAVVSNAKNY 127 (381)
T ss_dssp -TGGGCSEEEECCCHH------------------HHHHHHHHHHHTTCEEEECCSTT
T ss_pred -hcccCCEEEECCChh------------------HHHHHHHHHHhCCCEEEEcCCcc
Confidence 246799999987522 14456666667777888888864
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0003 Score=65.11 Aligned_cols=73 Identities=18% Similarity=0.137 Sum_probs=51.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc-cccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK-MADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~-~~d~ 92 (390)
++|||+||+|-||..+++.+... |+ +|+++++++.....+.+.. +... ..|..+.+ .+.+... ++|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~------g~~~-~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSEL------GFDA-AINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTS------CCSE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHc------CCce-EEecCchHHHHHHHHhcCCCCCE
Confidence 79999999999999999999988 88 9999999876554443210 2221 23555433 2333322 4999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||+++|
T Consensus 234 vi~~~G 239 (357)
T 2zb4_A 234 YFDNVG 239 (357)
T ss_dssp EEESCC
T ss_pred EEECCC
Confidence 999997
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00049 Score=63.09 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=52.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc-ccccccCCCCCeeEEeCCCCChhH---HHHhhc-cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL-LEPESQTGADRIQFHRLNIKHDSR---LEGLIK-MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~i~~~~~D~~d~~~---~~~~~~-~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.....+ .+. +... ..|..+.+. +.++.. ++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL-------GFDG-AIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT-------CCSE-EEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCCE-EEECCCHHHHHHHHHhcCCCc
Confidence 5689999999999999999999888 99999999988766655 332 2222 134444332 333222 49
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||+++|
T Consensus 220 d~vi~~~g 227 (336)
T 4b7c_A 220 DVFFDNVG 227 (336)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999987
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00046 Score=63.77 Aligned_cols=75 Identities=9% Similarity=-0.026 Sum_probs=53.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+++|||+||+|-||..+++.+... |++|+++++++.....+.+. +... ..|..+.+ .+.+... ++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL-------GAAA-GFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-------TCSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-------CCcE-EEecCChHHHHHHHHHhcCCCc
Confidence 5689999999999999999999988 99999999987665544322 1221 23444433 3333332 49
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||+++|.
T Consensus 233 d~vi~~~G~ 241 (354)
T 2j8z_A 233 NLILDCIGG 241 (354)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCc
Confidence 999999973
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00034 Score=64.46 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=59.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc----cCCC---CCeeEEeCCCCChhHHHHhhcc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES----QTGA---DRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~---~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
++||.|.||||++|..|++.|.+.+..++..+..+.+.-+.+..... .... ....+... +.+ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~~ 79 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----HhcC
Confidence 46899999999999999998888777788777544332111111000 0000 01111111 222 2367
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+|+||-|.+... +..++..+.+.|.++|=.|+..
T Consensus 80 vDvvf~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 80 VDIIFSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp CCEEEECCCTTT------------------HHHHHHHHHHTTCEEEECSSTT
T ss_pred CCEEEECCChHH------------------HHHHHHHHHHCCCEEEEcCCCc
Confidence 999999876331 4455566667778888888864
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00034 Score=64.46 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=59.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc----cCCC---CCeeEEeCCCCChhHHHHhhcc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES----QTGA---DRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~---~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
++||.|.||||++|..|++.|.+.+..++..+..+.+.-+.+..... .... ....+... +.+ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~~ 79 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CHH----HhcC
Confidence 46899999999999999998888777788777544332111111000 0000 01111111 222 2367
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+|+||-|.+... +..++..+.+.|.++|=.|+..
T Consensus 80 vDvvf~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 80 VDIIFSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp CCEEEECCCTTT------------------HHHHHHHHHHTTCEEEECSSTT
T ss_pred CCEEEECCChHH------------------HHHHHHHHHHCCCEEEEcCCCc
Confidence 999999876331 4455566667778888888864
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0018 Score=59.07 Aligned_cols=95 Identities=11% Similarity=0.026 Sum_probs=57.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
++||.|.||||++|..|++.|.++ +..++..+....+.-+.+. . .+.+...-++.. ..+.++|+||
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~------~~~~~~~~~~~~-----~~~~~~Dvvf 68 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-F------RGQEIEVEDAET-----ADPSGLDIAL 68 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-E------TTEEEEEEETTT-----SCCTTCSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-e------cCCceEEEeCCH-----HHhccCCEEE
Confidence 468999999999999999988886 3345666553332211111 0 111222222222 2246799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
-|.+.. .+...+..+.+.|.++|=.|+..
T Consensus 69 ~a~~~~------------------~s~~~a~~~~~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 69 FSAGSA------------------MSKVQAPRFAAAGVTVIDNSSAW 97 (344)
T ss_dssp ECSCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred ECCChH------------------HHHHHHHHHHhCCCEEEECCCcc
Confidence 987632 14455666667777888888854
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00036 Score=64.25 Aligned_cols=114 Identities=14% Similarity=0.043 Sum_probs=71.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe----EEEEecCChh----hh----ccccccccCCCCCeeEEeCCCCChhHH
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK----ILALDVYNDK----IK----HLLEPESQTGADRIQFHRLNIKHDSRL 83 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~----V~~~~r~~~~----~~----~~~~~~~~~~~~~i~~~~~D~~d~~~~ 83 (390)
.++||.|+||+|.||++++..|...+-+. +.+.+...+. .. .+...... ....+.+ . ...
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p-~~~~v~i-----~--~~~ 102 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYP-LLREVSI-----G--IDP 102 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TEEEEEE-----E--SCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhh-hcCCcEE-----e--cCC
Confidence 34789999999999999999999862222 5554432221 11 11110000 0011221 1 124
Q ss_pred HHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-C--CcEEEeec
Q 016370 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N--KRLIHFST 139 (390)
Q Consensus 84 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~--~~~v~~Ss 139 (390)
.+.++++|+||-+||... .........+..|+.-.+.+.+.+.++ + ..++.+|-
T Consensus 103 y~~~~daDvVVitag~pr--kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp HHHTTTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HHHhCCCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 567789999999998653 233456678889999999999888875 4 66666664
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00075 Score=58.52 Aligned_cols=36 Identities=14% Similarity=0.253 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEE-EecCC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILA-LDVYN 52 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~-~~r~~ 52 (390)
|.||||.|+|+ |.+|+.+++.+.+.++ ++.+ +++..
T Consensus 1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~ 37 (243)
T 3qy9_A 1 MASMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTP 37 (243)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred CCceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence 45789999999 9999999999999855 8666 55554
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00026 Score=65.65 Aligned_cols=77 Identities=17% Similarity=0.323 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+++|+|+|+ |-+|+.+++.|... |.+|++++|++.....+.+.. ...+..+ ..+.+++.+.+.++|+||
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLF----GSRVELL---YSNSAEIETAVAEADLLI 235 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----GGGSEEE---ECCHHHHHHHHHTCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhh----CceeEee---eCCHHHHHHHHcCCCEEE
Confidence 56689999998 99999999999998 889999999887655443221 0122122 234556777788999999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
++++..
T Consensus 236 ~~~~~~ 241 (361)
T 1pjc_A 236 GAVLVP 241 (361)
T ss_dssp ECCCCT
T ss_pred ECCCcC
Confidence 998754
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00041 Score=63.85 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=65.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+++|||+||+|-+|..+++.+... |++|+++++++.....+.+. +...+ .|..+.+ .+.++.. ++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-------ga~~~-~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL-------GADET-VNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-------TCSEE-EETTSTTHHHHHHHHTTTTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-------CCCEE-EcCCcccHHHHHHHHhCCCCc
Confidence 5689999999999999999999988 89999999987665544332 22221 3555433 3444432 59
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
|+||++++ .. .....++.++.. .++|.+++.
T Consensus 237 d~vi~~~g-~~-----------------~~~~~~~~l~~~-G~~v~~g~~ 267 (343)
T 2eih_A 237 DKVVDHTG-AL-----------------YFEGVIKATANG-GRIAIAGAS 267 (343)
T ss_dssp EEEEESSC-SS-----------------SHHHHHHHEEEE-EEEEESSCC
T ss_pred eEEEECCC-HH-----------------HHHHHHHhhccC-CEEEEEecC
Confidence 99999997 21 023445555555 478877753
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00012 Score=58.17 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=52.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
+++|+|+|+ |.+|+.+++.|.+. |++|++++|++.....+.... ++... ..+++.+++.++|+||.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~-g~~v~v~~r~~~~~~~~a~~~------~~~~~-----~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYP-QYKVTVAGRNIDHVRAFAEKY------EYEYV-----LINDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTT-TCEEEEEESCHHHHHHHHHHH------TCEEE-----ECSCHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHHh------CCceE-----eecCHHHHhcCCCEEEEe
Confidence 689999995 99999999999997 899999999877655433210 12221 223466677889999998
Q ss_pred cccc
Q 016370 97 AAIC 100 (390)
Q Consensus 97 a~~~ 100 (390)
.+..
T Consensus 88 t~~~ 91 (144)
T 3oj0_A 88 TSSK 91 (144)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 7644
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0013 Score=60.50 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=62.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~d~ 92 (390)
++|||+||+|-||...++.+... |.+|+++++++.....+.+. +...+ .|..+.+ .+.++.. ++|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~-------Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI-------GAAHV-LNEKAPDFEATLREVMKAEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH-------TCSEE-EETTSTTHHHHHHHHHHHHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCCEE-EECCcHHHHHHHHHHhcCCCCcE
Confidence 68999999999999999999998 89999999887766554432 22211 2333322 3333332 5999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
||++++.. .....++.++.. .++|.+++
T Consensus 237 vid~~g~~------------------~~~~~~~~l~~~-G~iv~~G~ 264 (349)
T 3pi7_A 237 FLDAVTGP------------------LASAIFNAMPKR-ARWIIYGR 264 (349)
T ss_dssp EEESSCHH------------------HHHHHHHHSCTT-CEEEECCC
T ss_pred EEECCCCh------------------hHHHHHhhhcCC-CEEEEEec
Confidence 99998731 023344555444 58887765
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00044 Score=63.87 Aligned_cols=74 Identities=9% Similarity=0.074 Sum_probs=52.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhh-cccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLI-KMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~-~~~d 91 (390)
.+.+|||+||+|-||..+++.+... |.+|+++++++.....+.+. +...+ .|..+.+ .+.++. .++|
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-------Ga~~~-~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL-------GAKRG-INYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-------TCSEE-EETTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-------CCCEE-EeCCchHHHHHHHHHhCCCce
Confidence 5689999999999999999999988 99999999988766554432 12211 2333332 233332 2499
Q ss_pred EEEEecc
Q 016370 92 LTINLAA 98 (390)
Q Consensus 92 ~Vih~a~ 98 (390)
+||+++|
T Consensus 238 vvid~~g 244 (353)
T 4dup_A 238 IILDMIG 244 (353)
T ss_dssp EEEESCC
T ss_pred EEEECCC
Confidence 9999987
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00064 Score=61.99 Aligned_cols=75 Identities=16% Similarity=0.113 Sum_probs=53.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~~--~~ 90 (390)
.+.+|||+||+|-||..+++.+... |.+|+++++++.+.....+. +... ..|..+. +.+.+... ++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------Ga~~-~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL-------GAWE-TIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-------TCSE-EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCCE-EEeCCCccHHHHHHHHhCCCCc
Confidence 5689999999999999999999998 89999999987766554432 2211 1233333 33444433 49
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||++++.
T Consensus 211 Dvvid~~g~ 219 (325)
T 3jyn_A 211 PVVYDGVGQ 219 (325)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCh
Confidence 999999873
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00071 Score=61.92 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~~--~~ 90 (390)
.+.+|||+||+|-||...++.+... |.+|+++++++.+.....+. +... ..|..+. +.+.++.. ++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------ga~~-~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY-------GAEY-LINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-------TCSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCcE-EEeCCCchHHHHHHHHhCCCCc
Confidence 5689999999999999999999888 99999999987766544332 2221 1233333 33444432 49
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||++++.
T Consensus 219 D~vid~~g~ 227 (334)
T 3qwb_A 219 DASFDSVGK 227 (334)
T ss_dssp EEEEECCGG
T ss_pred eEEEECCCh
Confidence 999999973
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00091 Score=60.11 Aligned_cols=77 Identities=18% Similarity=0.159 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+.+++|+|+|+ |-+|+.++..|.+. |+ +|++++|+.++.+.+.+... .... +..+.+++.+.+.++|+
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~-G~~~V~v~nR~~~ka~~la~~~~----~~~~----~~~~~~~~~~~~~~aDi 207 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLST-AAERIDMANRTVEKAERLVREGD----ERRS----AYFSLAEAETRLAEYDI 207 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTT-TCSEEEEECSSHHHHHHHHHHSC----SSSC----CEECHHHHHHTGGGCSE
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhh----hccC----ceeeHHHHHhhhccCCE
Confidence 356789999997 66999999999998 87 89999998766554432210 1000 12233567778888999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||++.+..
T Consensus 208 vIn~t~~~ 215 (297)
T 2egg_A 208 IINTTSVG 215 (297)
T ss_dssp EEECSCTT
T ss_pred EEECCCCC
Confidence 99998755
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00057 Score=61.63 Aligned_cols=73 Identities=12% Similarity=0.041 Sum_probs=52.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|||+||+|-+|..+++.+... |.+|+++++++.......+. +...+ .|..+.+++.+.++++|+||+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------ga~~~-~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL-------GAEEA-ATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT-------TCSEE-EEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-------CCCEE-EECCcchhHHHHhcCceEEEE
Confidence 4679999999999999999999888 89999999987665544332 22222 344441334444477999999
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
++
T Consensus 196 -~g 197 (302)
T 1iz0_A 196 -VR 197 (302)
T ss_dssp -CS
T ss_pred -CC
Confidence 76
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00068 Score=60.12 Aligned_cols=76 Identities=20% Similarity=0.178 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|+ |-+|+.++..|.+. |.+|++++|+.+....+.+.... . .. ....|+ +++.+ .++|+|
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~-G~~V~v~~R~~~~~~~la~~~~~-~-~~--~~~~~~---~~~~~--~~~Div 184 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAH-T-GS--IQALSM---DELEG--HEFDLI 184 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGG-G-SS--EEECCS---GGGTT--CCCSEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHhhc-c-CC--eeEecH---HHhcc--CCCCEE
Confidence 356789999998 66999999999999 89999999987665444322110 0 01 222333 22222 579999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|++++..
T Consensus 185 Vn~t~~~ 191 (271)
T 1nyt_A 185 INATSSG 191 (271)
T ss_dssp EECCSCG
T ss_pred EECCCCC
Confidence 9999864
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0017 Score=58.47 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=65.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcc-cccc-ccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHL-LEPE-SQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~-~~~~-~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|||.|+|| |.+|..++..|... |+ +|+++++++...... .+.. ........++.. .+. +.++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~-g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~aDvV 71 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLR-GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADAQVV 71 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCCCEE
Confidence 58999998 99999999999888 88 999999987543321 1100 000111223322 122 357889999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|-+++.... ........+..|+...+.+++.+.+.. ..+|.+|
T Consensus 72 Ii~~~~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 72 ILTAGANQK--PGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp EECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred EEcCCCCCC--CCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999975431 112223456678888888888887766 4444444
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0031 Score=57.17 Aligned_cols=112 Identities=15% Similarity=0.181 Sum_probs=71.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhcc-ccccc--cCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHL-LEPES--QTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~-~~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
++|||.|+|+ |.+|..++..|... + .+|+++++++...+.. ..... ......+++.. | + .+.++++
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~-~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~a 75 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQ-GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDA 75 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhC-CCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCC
Confidence 4579999998 99999999999887 5 4899999986533321 11100 00011333332 1 1 2457889
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|+||-+++...... ......+..|..-.+.+++.+.+.. ..++.+|
T Consensus 76 DvViia~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 76 DLVVICAGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp SEEEECCSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred CEEEEcCCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 99999998764322 2223456778888888888887776 3444443
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0028 Score=57.26 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=73.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhcc-ccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHL-LEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~-~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|||.|+|| |.+|..++..|+.. + .++.++++.+...+.. .+... ......+.+.. + + .++++++|+|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~-~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V 71 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALL-GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAV 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence 68999998 99999999999987 4 5899999986544321 11100 00112334332 1 2 3357889999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|.+++... ............|+...+.+++.+.+.. ..+|.+|
T Consensus 72 ii~ag~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 72 VLAAGVAQ--RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp EECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EECCCCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 99998753 2223344567788888999998888877 5666664
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00094 Score=61.30 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=53.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+.+|||+||+|-||..+++.+... |.+|+++++++.....+.+. +...+ .|..+.+ .+.++.. ++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-------ga~~~-~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL-------GAAYV-IDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-------TCSEE-EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC-------CCcEE-EeCCcccHHHHHHHHhCCCCC
Confidence 5689999999999999999999888 89999999988766555432 22211 2333332 3333333 49
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||+++|.
T Consensus 215 Dvvid~~g~ 223 (340)
T 3gms_A 215 DAAIDSIGG 223 (340)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999873
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0034 Score=56.98 Aligned_cols=111 Identities=14% Similarity=0.167 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhh--cc--ccccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIK--HL--LEPESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~--~~--~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.++|||.|+|+ |.+|..++..|.+. |+ +|+++++++.... .. .... . ......+... .+. +.++
T Consensus 5 ~~~mkI~IiGa-G~vG~~~a~~l~~~-g~~~~V~l~d~~~~~~~~~~~~~~~~~-~-~~~~~~v~~~--~~~----~~~~ 74 (319)
T 1lld_A 5 VKPTKLAVIGA-GAVGSTLAFAAAQR-GIAREIVLEDIAKERVEAEVLDMQHGS-S-FYPTVSIDGS--DDP----EICR 74 (319)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHHHTG-G-GSTTCEEEEE--SCG----GGGT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCChhHHHHHHHHHHhhh-h-hcCCeEEEeC--CCH----HHhC
Confidence 35689999998 99999999999988 88 9999999864433 11 1100 0 0012222211 122 2467
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEe
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHF 137 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~ 137 (390)
++|+||-+++.... ...+....+..|+...+.+++...+.+ ..+|..
T Consensus 75 ~aD~Vii~v~~~~~--~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~ 122 (319)
T 1lld_A 75 DADMVVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYML 122 (319)
T ss_dssp TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 89999999875432 223344566778887888887776655 334433
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0032 Score=55.02 Aligned_cols=111 Identities=15% Similarity=0.194 Sum_probs=69.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccc-------------------cc-CCCCCeeEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPE-------------------SQ-TGADRIQFH 73 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~-------------------~~-~~~~~i~~~ 73 (390)
++.++|+|.|++| +|+.+++.|... |. +++++++..-...++.+.. .. ...-.++.+
T Consensus 26 l~~~~VlvvG~Gg-lG~~va~~La~~-Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 26 LLDSQVLIIGLGG-LGTPAALYLAGA-GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHTCEEEEECCST-THHHHHHHHHHT-TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HhcCcEEEEccCH-HHHHHHHHHHHc-CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 4567999999755 999999999998 75 6888877542222221110 00 001124444
Q ss_pred eCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 74 ~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
..++. .+.+.++++++|+||.+... ...-..+-++|.+.++.+|+.+....+|.
T Consensus 104 ~~~~~-~~~~~~~~~~~DvVi~~~d~-----------------~~~r~~l~~~~~~~~~p~i~~~~~g~~G~ 157 (251)
T 1zud_1 104 QQRLT-GEALKDAVARADVVLDCTDN-----------------MATRQEINAACVALNTPLITASAVGFGGQ 157 (251)
T ss_dssp CSCCC-HHHHHHHHHHCSEEEECCSS-----------------HHHHHHHHHHHHHTTCCEEEEEEEBTEEE
T ss_pred eccCC-HHHHHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHhCCCEEEEeccccceE
Confidence 44444 45677888899999987531 11123455677888888998887655544
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0025 Score=58.88 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=53.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC---CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP---HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
||||.|.||+|++|+.|++.|+.+.+ .+++.+..++ .-+..... .+......|..+.+. +.++|+|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~------~g~~i~~~~~~~~~~----~~~~DvV 69 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSF------GGTTGTLQDAFDLEA----LKALDII 69 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGG------GTCCCBCEETTCHHH----HHTCSEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCcccc------CCCceEEEecCChHH----hcCCCEE
Confidence 57999999999999999996555424 3556655542 21111100 011222223334443 3589999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCC--cEEEeec
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK--RLIHFST 139 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~v~~Ss 139 (390)
|-+.+.. .+..++..+.+.|. .+|=.|+
T Consensus 70 f~a~g~~------------------~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 70 VTCQGGD------------------YTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp EECSCHH------------------HHHHHHHHHHHTTCCCEEEECSS
T ss_pred EECCCch------------------hHHHHHHHHHHCCCCEEEEcCCh
Confidence 9987622 24556666677773 3444444
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00095 Score=60.69 Aligned_cols=112 Identities=14% Similarity=0.133 Sum_probs=69.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccccc---CCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQ---TGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+|||.|+|| |.+|..++..|... |+ +|.++++++...+........ ......++.. ..++ ++++++|+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~-g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~ 75 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQK-NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGADV 75 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCE
Confidence 469999998 99999999999998 77 899999887544321110000 0001111211 0123 45789999
Q ss_pred EEEeccccCCccccCC-----hhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 93 TINLAAICTPADYNTR-----PLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~-----~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
||-+++.... .... .......|+.-.+.+++.+.+.. ..+|.+|
T Consensus 76 Vi~a~g~p~k--~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 126 (322)
T 1t2d_A 76 VIVTAGFTKA--PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp EEECCSCSSC--TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred EEEeCCCCCC--CCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999975421 1111 23456677777888888777665 4455554
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0047 Score=55.95 Aligned_cols=111 Identities=12% Similarity=0.024 Sum_probs=74.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcc----ccccccCCCCCeeEE-eCCCCChhHHHHhhc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHL----LEPESQTGADRIQFH-RLNIKHDSRLEGLIK 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~i~~~-~~D~~d~~~~~~~~~ 88 (390)
..+||.|+|+ |.+|..++..|... |. +|.+++..+...+.. ..... ......+. ..|+. . ++
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~-g~~~ev~L~Di~~~~~~g~a~DL~~~~~--~~~~~~i~~t~d~~------~-~~ 88 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMK-DLADEVALVDVMEDKLKGEMMDLEHGSL--FLHTAKIVSGKDYS------V-SA 88 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHH-CCCSEEEEECSCHHHHHHHHHHHHHHGG--GSCCSEEEEESSSC------S-CS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCCeEEEEECCHHHHHHHHHHhhhhhh--cccCCeEEEcCCHH------H-hC
Confidence 4589999998 99999999999998 75 899999876533221 11000 01112222 23332 2 67
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
++|+||-+||.... ...+..+.+..|+.-.+.+++.+.+.+ ..++.+|-
T Consensus 89 daDiVIitaG~p~k--pG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 89 GSKLVVITAGARQQ--EGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp SCSEEEECCSCCCC--SSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 89999999987542 233445677889888899988888777 55666663
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00088 Score=62.17 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC---hhhhccccccccCCCCCeeEEeCCCCC--hhHHHHhhcc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLNIKH--DSRLEGLIKM 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~i~~~~~D~~d--~~~~~~~~~~ 89 (390)
+++++|||+|| |-||..+++.+... |.+|+++++++ .......+. +...+ | .+ .+.+.+.-.+
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~-------ga~~v--~-~~~~~~~~~~~~~~ 246 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET-------KTNYY--N-SSNGYDKLKDSVGK 246 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH-------TCEEE--E-CTTCSHHHHHHHCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh-------CCcee--c-hHHHHHHHHHhCCC
Confidence 44789999999 99999999999988 89999999987 555433321 33333 4 33 2233331146
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||++++.
T Consensus 247 ~d~vid~~g~ 256 (366)
T 2cdc_A 247 FDVIIDATGA 256 (366)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999874
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0038 Score=56.44 Aligned_cols=112 Identities=16% Similarity=0.119 Sum_probs=70.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCChhhhcccccccc---CCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE-TPHKILALDVYNDKIKHLLEPESQ---TGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|||.|+|+ |.+|..++..|.+. .|++|+++++++...+........ ......++... .| +.. ++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND---YAD-TANSDIV 73 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GGG-GTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CC---HHH-HCCCCEE
Confidence 68999998 99999999999885 279999999987654432100000 00011111110 12 223 6789999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|-+++... .........+..|+...+.+++.+.+.. ..+|.+|
T Consensus 74 iiav~~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 74 IITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp EECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 99987532 2222344566788888888888887766 5555554
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0008 Score=59.64 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+++|+|+|+ |-+|+.++..|.+. |+ +|+++.|+.++.+.+.. .+..+ ..+++.+++.++|+|
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~--------~~~~~-----~~~~~~~~~~~aDiV 179 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKI-VRPTLTVANRTMSRFNNWSL--------NINKI-----NLSHAESHLDEFDII 179 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTT-CCSCCEEECSCGGGGTTCCS--------CCEEE-----CHHHHHHTGGGCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHH--------hcccc-----cHhhHHHHhcCCCEE
Confidence 56789999996 78899999999998 88 89999998876554432 22221 345677778889999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|++...
T Consensus 180 InaTp~ 185 (277)
T 3don_A 180 INTTPA 185 (277)
T ss_dssp EECCC-
T ss_pred EECccC
Confidence 998754
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0013 Score=62.11 Aligned_cols=127 Identities=13% Similarity=0.071 Sum_probs=72.6
Q ss_pred CCCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE------EeCCCCChh
Q 016370 8 LDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF------HRLNIKHDS 81 (390)
Q Consensus 8 ~~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~------~~~D~~d~~ 81 (390)
..+..+...|.+|.|.| .||+|-.++..|.+. |++|++++.++.....+.+...+-..++++- -.+.+.-..
T Consensus 12 ~~~~p~~~~m~~IaViG-lGYVGLp~A~~~A~~-G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt 89 (444)
T 3vtf_A 12 SGLVPRGSHMASLSVLG-LGYVGVVHAVGFALL-GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAE 89 (444)
T ss_dssp -CCCCTTCCCCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECS
T ss_pred CCcCCCCCCCCEEEEEc-cCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEc
Confidence 33444445678999997 999999999999999 9999999999887776654321111111000 001111112
Q ss_pred HHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecc
Q 016370 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTC 140 (390)
Q Consensus 82 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~ 140 (390)
+..+++..+|++|-|.+.. ......+...+ -...+..+.+.++..+ .-+|+-||.
T Consensus 90 ~~~~ai~~ad~~~I~VpTP--~~~d~~~Dl~~--v~~a~~~I~~~l~~~~~g~lVV~eSTV 146 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTP--PAPDGSADLRY--VEAAARAVGRGIRAKGRWHLVVVKSTV 146 (444)
T ss_dssp SHHHHHHTSSEEEECCCCC--BCTTSSBCCHH--HHHHHHHHHHHHHHHCSCCEEEECSCC
T ss_pred CHHHHHhcCCceEEEecCC--CCCCCCCCcHH--HHHHHHHHHHHHhhcCCCeEEEEeCCC
Confidence 3455666789999876543 22222221111 1122445555565433 567777775
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00063 Score=61.56 Aligned_cols=73 Identities=21% Similarity=0.295 Sum_probs=48.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEE--------eCCCCChhHHHHhh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH--------RLNIKHDSRLEGLI 87 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~--------~~D~~d~~~~~~~~ 87 (390)
+||+|+|.|+ |.+|..++..|.+. |++|++++|++.....+.+. ++... ..+..+.+++...+
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (316)
T 2ew2_A 2 NAMKIAIAGA-GAMGSRLGIMLHQG-GNDVTLIDQWPAHIEAIRKN-------GLIADFNGEEVVANLPIFSPEEIDHQN 72 (316)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH-------CEEEEETTEEEEECCCEECGGGCCTTS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhC-------CEEEEeCCCeeEecceeecchhhcccC
Confidence 4689999995 99999999999998 99999999987655544321 22221 11222333333344
Q ss_pred ccccEEEEec
Q 016370 88 KMADLTINLA 97 (390)
Q Consensus 88 ~~~d~Vih~a 97 (390)
.++|+||-+.
T Consensus 73 ~~~d~vi~~v 82 (316)
T 2ew2_A 73 EQVDLIIALT 82 (316)
T ss_dssp CCCSEEEECS
T ss_pred CCCCEEEEEe
Confidence 5799999876
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0013 Score=60.33 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCe-eEEeCCCCC-hhHHHHhhc--ccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRI-QFHRLNIKH-DSRLEGLIK--MAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i-~~~~~D~~d-~~~~~~~~~--~~d 91 (390)
.+.+|||+||+|-||..+++.+... |.+|+++++++.......+. +. .++..+ .+ .+.+.++.. ++|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV-------GADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-------TCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-------CCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 5689999999999999999999988 99999999987766544432 12 223223 22 233444443 499
Q ss_pred EEEEeccc
Q 016370 92 LTINLAAI 99 (390)
Q Consensus 92 ~Vih~a~~ 99 (390)
+||+++|.
T Consensus 230 vvid~~g~ 237 (342)
T 4eye_A 230 MVVDPIGG 237 (342)
T ss_dssp EEEESCC-
T ss_pred EEEECCch
Confidence 99999873
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0011 Score=59.71 Aligned_cols=83 Identities=12% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecC---ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVY---NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.+.++++||+|+ |-+|+.++..|.+. |. +|+++.|+ ..+.+.+.+..... .+..+...++.+.+.+.+.+.+
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~-G~~~v~v~nRt~~~~~~a~~la~~~~~~--~~~~v~~~~~~~l~~~~~~l~~ 220 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIE-GIKEIKLFNRKDDFFEKAVAFAKRVNEN--TDCVVTVTDLADQHAFTEALAS 220 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT-TCSEEEEEECSSTHHHHHHHHHHHHHHH--SSCEEEEEETTCHHHHHHHHHH
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHc-CCCEEEEEECCCchHHHHHHHHHHhhhc--cCcceEEechHhhhhhHhhccC
Confidence 457889999997 78899999999998 87 89999998 44443332211100 1223333455554445667788
Q ss_pred ccEEEEecccc
Q 016370 90 ADLTINLAAIC 100 (390)
Q Consensus 90 ~d~Vih~a~~~ 100 (390)
+|+||++....
T Consensus 221 ~DiIINaTp~G 231 (312)
T 3t4e_A 221 ADILTNGTKVG 231 (312)
T ss_dssp CSEEEECSSTT
T ss_pred ceEEEECCcCC
Confidence 99999987543
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0013 Score=62.46 Aligned_cols=80 Identities=14% Similarity=0.229 Sum_probs=51.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE-E-----eCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF-H-----RLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~-~-----~~D~~d~~~~~~~~~~~d 91 (390)
|+|.|.| +|++|..++..|.+. |++|+++++++.....+......-..++.+- + .+.+....++.++++++|
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 5899998 799999999999998 9999999998876665543211000011000 0 011222234556677899
Q ss_pred EEEEeccc
Q 016370 92 LTINLAAI 99 (390)
Q Consensus 92 ~Vih~a~~ 99 (390)
+||-+...
T Consensus 79 vviiaVpt 86 (436)
T 1mv8_A 79 VSFICVGT 86 (436)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99998753
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0035 Score=56.32 Aligned_cols=112 Identities=15% Similarity=0.095 Sum_probs=69.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
+..++||.|+|| |.+|..++..|+.. |. +|.+++..+.......+.... ..+++... .| + +.++++|
T Consensus 11 ~~~~~kV~ViGa-G~vG~~~a~~l~~~-g~~~ev~L~Di~~~~~g~a~dl~~~-~~~~i~~t-~d------~-~~l~~aD 79 (303)
T 2i6t_A 11 NKTVNKITVVGG-GELGIACTLAISAK-GIADRLVLLDLSEGTKGATMDLEIF-NLPNVEIS-KD------L-SASAHSK 79 (303)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECCC-----CHHHHHHH-TCTTEEEE-SC------G-GGGTTCS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEcCCcchHHHHHHHhhh-cCCCeEEe-CC------H-HHHCCCC
Confidence 345689999996 99999999999998 77 899999976411111111000 11233332 22 3 4578899
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+||-+++... ...........|+.-.+.+++.+.+.. ..+|.+|-
T Consensus 80 ~Vi~aag~~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 80 VVIFTVNSLG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred EEEEcCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 9999998742 223444567788888888888887766 45555553
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00066 Score=63.22 Aligned_cols=78 Identities=27% Similarity=0.344 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+|+ |-||..+++.+... |.+|+++++++.....+.+.. ...+. .+..+.+.+.+++.++|+|
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~----g~~~~---~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEF----CGRIH---TRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT----TTSSE---EEECCHHHHHHHHHHCSEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhc----CCeeE---eccCCHHHHHHHHcCCCEE
Confidence 467899999998 99999999999998 899999999876654332210 11211 2234556788888899999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.+++..
T Consensus 236 i~~~~~p 242 (377)
T 2vhw_A 236 IGAVLVP 242 (377)
T ss_dssp EECCCCT
T ss_pred EECCCcC
Confidence 9988643
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.001 Score=63.38 Aligned_cols=80 Identities=14% Similarity=0.171 Sum_probs=53.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE-E-----eCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF-H-----RLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~-~-----~~D~~d~~~~~~~~~~~d 91 (390)
|||.|.| .|++|..++..|.+. |++|+++++++.....+.+.......++++- + .+.+.-..++.++++++|
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~-G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAEL-GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 6999998 699999999999999 9999999999876665543211100111100 0 111222234667788899
Q ss_pred EEEEeccc
Q 016370 92 LTINLAAI 99 (390)
Q Consensus 92 ~Vih~a~~ 99 (390)
+||-+...
T Consensus 81 vViiaVpt 88 (450)
T 3gg2_A 81 IIFIAVGT 88 (450)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99988754
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0017 Score=59.80 Aligned_cols=76 Identities=17% Similarity=0.291 Sum_probs=53.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+++|||+||+|-||..+++.+....|.+|+++++++.......+. +...+ .|..+.+ .+.++.. ++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-------g~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-------GADYV-INASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-------TCSEE-EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-------CCCEE-ecCCCccHHHHHHHHhcCCCc
Confidence 5689999999999999999988876478999999887665544332 12111 2444433 3555553 59
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||++++.
T Consensus 242 d~vi~~~g~ 250 (347)
T 1jvb_A 242 DAVIDLNNS 250 (347)
T ss_dssp EEEEESCCC
T ss_pred eEEEECCCC
Confidence 999999973
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0054 Score=55.62 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=69.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcccccc--ccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPE--SQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~--~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|||.|+|+ |.+|..++..|.+. |+ +|+++++++.......... .........+.. .+. +.++++|+|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~-g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMK-GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVV 71 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEE
Confidence 68999998 99999999999998 88 9999999875443321100 000001122222 222 346789999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|-+++.... ...........|+...+.+++.+.+.. ..+|.+|
T Consensus 72 iiav~~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 72 IVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp EECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 999876431 112234556678888888888877655 4455544
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0024 Score=59.23 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=66.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc-cccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.+.+|||+|+ |-||..+++.+... |.+|+++++++....... +. +... ..|..+.+.+.++..++|+||
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~l-------Ga~~-v~~~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNF-------GADS-FLVSRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTS-------CCSE-EEETTCHHHHHHTTTCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc-------CCce-EEeccCHHHHHHhhCCCCEEE
Confidence 5689999996 99999999999888 899999998876655433 21 2222 235566667777767799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
++++... .....++.++.. .++|.+++
T Consensus 257 d~~g~~~-----------------~~~~~~~~l~~~-G~iv~~g~ 283 (366)
T 1yqd_A 257 DTVSAVH-----------------PLLPLFGLLKSH-GKLILVGA 283 (366)
T ss_dssp ECCSSCC-----------------CSHHHHHHEEEE-EEEEECCC
T ss_pred ECCCcHH-----------------HHHHHHHHHhcC-CEEEEEcc
Confidence 9987431 022344555444 47888776
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00048 Score=59.04 Aligned_cols=68 Identities=18% Similarity=0.090 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEE-EecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILA-LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|.||+|.|.| +|.+|..+++.|.+. |++|++ .+|+++....+.... ++.... . ..+.+.++|+|
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~-g~~V~~v~~r~~~~~~~l~~~~------g~~~~~---~----~~~~~~~aDvV 85 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAA-QIPAIIANSRGPASLSSVTDRF------GASVKA---V----ELKDALQADVV 85 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHT-TCCEEEECTTCGGGGHHHHHHH------TTTEEE---C----CHHHHTTSSEE
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHh------CCCccc---C----hHHHHhcCCEE
Confidence 4568999999 899999999999998 999999 888876655433210 111111 1 12335779999
Q ss_pred EEec
Q 016370 94 INLA 97 (390)
Q Consensus 94 ih~a 97 (390)
|-+.
T Consensus 86 ilav 89 (220)
T 4huj_A 86 ILAV 89 (220)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9875
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00069 Score=60.55 Aligned_cols=65 Identities=26% Similarity=0.445 Sum_probs=48.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|.|.|+||.+|+.+++.|.+. |++|++++|++.....+... ++. ..+ ..++++++|+||-+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~-------g~~-----~~~---~~~~~~~aDvVi~a 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGRDRLQGM-------GIP-----LTD---GDGWIDEADVVVLA 74 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHHHHHHHT-------TCC-----CCC---SSGGGGTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHhc-------CCC-----cCC---HHHHhcCCCEEEEc
Confidence 479999999999999999999998 89999999987665544321 221 112 33456789999987
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 75 v 75 (286)
T 3c24_A 75 L 75 (286)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0015 Score=60.56 Aligned_cols=98 Identities=13% Similarity=0.032 Sum_probs=64.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhh-cccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLI-KMAD 91 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~-~~~d 91 (390)
.+.+|||+||+|.||..+++.+... |++|+++++++.....+.+. +...+ .|..+.+ .+.+.. .++|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~-------Ga~~~-~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL-------GCDRP-INYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-------TCSEE-EETTTSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc-------CCcEE-EecCChhHHHHHHHhcCCCCC
Confidence 5679999999999999999999988 89999999987665544332 22221 2333322 233322 2499
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+||++++.. .....++.++.. .++|.+++..
T Consensus 234 ~vid~~g~~------------------~~~~~~~~l~~~-G~iv~~g~~~ 264 (362)
T 2c0c_A 234 VVYESVGGA------------------MFDLAVDALATK-GRLIVIGFIS 264 (362)
T ss_dssp EEEECSCTH------------------HHHHHHHHEEEE-EEEEECCCGG
T ss_pred EEEECCCHH------------------HHHHHHHHHhcC-CEEEEEeCCC
Confidence 999998721 123445555554 4888887643
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00043 Score=61.69 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+++++++|+|+ |-+|+.++..|.+. |. +|++++|+.++.+.+.+..... ...+.+...+ .+++.+.+.++|+
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~-~~~~~i~~~~---~~~l~~~l~~~Di 197 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNA-VGREAVVGVD---ARGIEDVIAAADG 197 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHT-TCSEEEEECSSHHHHHHHHHHHHHH-HTSCCEEEEC---STTHHHHHHHSSE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhh-cCCceEEEcC---HHHHHHHHhcCCE
Confidence 467889999997 78999999999998 87 7999999887655443211100 0112222223 2456677788999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||++....
T Consensus 198 VInaTp~G 205 (283)
T 3jyo_A 198 VVNATPMG 205 (283)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99987543
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0012 Score=60.31 Aligned_cols=37 Identities=24% Similarity=0.306 Sum_probs=31.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
.|.||.|.||||++|+.|++.|.+.+..++..+....
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~ 48 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT 48 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc
Confidence 5679999999999999999999998778888876543
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00099 Score=60.75 Aligned_cols=110 Identities=17% Similarity=0.111 Sum_probs=69.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc----cccc-cCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL----EPES-QTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~----~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+|||.|+|| |.+|..++..|... |+ +|+++++++...+... .... .....++... .| + ++++++
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~-g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~a 83 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQK-DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNS 83 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCC
Confidence 369999998 99999999999888 87 9999999875544211 1000 0001122211 22 3 457889
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|+||-+++... ............|+.-.+.+++.+.+.. ..+|.+|
T Consensus 84 D~VI~avg~p~--k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 131 (328)
T 2hjr_A 84 DVVIITAGVPR--KPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT 131 (328)
T ss_dssp SEEEECCSCCC--CTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEcCCCCC--CCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999997543 1112222445677777888888777665 4445554
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0045 Score=57.01 Aligned_cols=94 Identities=11% Similarity=-0.030 Sum_probs=52.4
Q ss_pred CEEEEEcCchhHHHHHHH-HHHhhC--CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCE-KILLET--PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~-~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|+|.|.||||++|+.|++ .|.+++ ..++..+..+. .-+.+... .+......+..+.+ .+.++|+||
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~------~~~~~~~~~~~~~~----~~~~~Dvvf 69 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNF------GKDAGMLHDAFDIE----SLKQLDAVI 69 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCS------SSCCCBCEETTCHH----HHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHh------CCCceEEEecCChh----HhccCCEEE
Confidence 589999999999999999 555553 24666654332 11111110 01111111222322 246899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTC 140 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~ 140 (390)
-|.+.. .+..++..+.+.| +++|=.|+.
T Consensus 70 ~a~~~~------------------~s~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 70 TCQGGS------------------YTEKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp ECSCHH------------------HHHHHHHHHHHTTCCCEEEECSST
T ss_pred ECCChH------------------HHHHHHHHHHHCCCCEEEEeCCch
Confidence 987632 1445555556667 356555553
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0019 Score=58.62 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=69.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc-cccc----cCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL-EPES----QTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~-~~~~----~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+|||.|+|+ |.+|..++..|.+. |+ +|+++++++....... .... .....++... .| + +.++++
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~-g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~a~~~a 73 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKD-NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DD------Y-ADISGS 73 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HHhCCC
Confidence 478999997 99999999999998 87 9999999875444310 0000 0001122211 12 3 456789
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
|+||-+++..... .....+....|....+.+++.+.+.. ..+|.+|.
T Consensus 74 DiVi~avg~p~~~--g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 74 DVVIITASIPGRP--KDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp SEEEECCCCSSCC--SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9999999765321 22223345567777777777776655 44555553
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0024 Score=60.88 Aligned_cols=44 Identities=16% Similarity=0.034 Sum_probs=37.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~ 60 (390)
.+.+|||+||+|-||...++.+... |.+|+++++++.....+.+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh
Confidence 5689999999999999999999888 9999999987766655433
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0015 Score=59.06 Aligned_cols=69 Identities=19% Similarity=0.245 Sum_probs=52.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
....||+|.|.| .|.+|..+++.|.+. |++|++.+|++.....+... ++.. ..++.++++++|+
T Consensus 17 ~~~~m~~I~iIG-~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~l~~~-------g~~~-------~~~~~~~~~~aDv 80 (310)
T 3doj_A 17 RGSHMMEVGFLG-LGIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELVEH-------GASV-------CESPAEVIKKCKY 80 (310)
T ss_dssp -CCCSCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHT-------TCEE-------CSSHHHHHHHCSE
T ss_pred ccccCCEEEEEC-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHC-------CCeE-------cCCHHHHHHhCCE
Confidence 455778999998 799999999999998 99999999998766654431 2221 2346667778999
Q ss_pred EEEec
Q 016370 93 TINLA 97 (390)
Q Consensus 93 Vih~a 97 (390)
||-+.
T Consensus 81 vi~~v 85 (310)
T 3doj_A 81 TIAML 85 (310)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 99775
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0057 Score=56.90 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+++|+|+| +|.+|+.+++.+.+. |++|++++..+....... .-+++..|+.|.+.+.++++.+|+|.
T Consensus 10 ~~~~~IlIlG-~G~lg~~la~aa~~l-G~~viv~d~~~~~p~~~~---------ad~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 10 KFGATIGIIG-GGQLGKMMAQSAQKM-GYKVVVLDPSEDCPCRYV---------AHEFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCTTCTTGGG---------SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECCCCChhhhh---------CCEEEECCCCCHHHHHHHHHhCCcce
Confidence 4678999999 678999999999999 999999987654222111 12467789999999999999999885
Q ss_pred E
Q 016370 95 N 95 (390)
Q Consensus 95 h 95 (390)
.
T Consensus 79 ~ 79 (377)
T 3orq_A 79 Y 79 (377)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0057 Score=55.21 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=68.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccc---cCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPES---QTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~---~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
||||.|+| +|.+|..++..|.+. | ++|+++++++.....+..... ......+.....| + +.++++|
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~-g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d------~-~~~~~aD 71 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQ-GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND------W-AALADAD 71 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC------G-GGGTTCS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC-CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC------H-HHhCCCC
Confidence 47999999 899999999999998 7 799999998754433221000 0001123332222 2 3567899
Q ss_pred EEEEeccccCCcc--ccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEe
Q 016370 92 LTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHF 137 (390)
Q Consensus 92 ~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~ 137 (390)
+||-++....... ...........|+.....+++.+.+.. ..+|.+
T Consensus 72 vViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~ 121 (309)
T 1hyh_A 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121 (309)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred EEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 9999887532100 111122345577777788888877765 344443
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0021 Score=59.33 Aligned_cols=76 Identities=22% Similarity=0.294 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC-----------------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI----------------- 77 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~----------------- 77 (390)
+.+.+|+|+|+ |-+|..+++.|... |.+|+++++++.....+.+. +.+++..++
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l-------Ga~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV-------GAQWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT-------TCEECCCC-------------CHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCeEEeccccccccccchhhhhHHHH
Confidence 46689999996 99999999999999 99999999998765554432 333333221
Q ss_pred -CChhHHHHhhccccEEEEeccc
Q 016370 78 -KHDSRLEGLIKMADLTINLAAI 99 (390)
Q Consensus 78 -~d~~~~~~~~~~~d~Vih~a~~ 99 (390)
.+.+.+.++++++|+||.++..
T Consensus 253 ~~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 253 AQQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCC
T ss_pred hhhHHHHHHHHhcCCEEEECCCC
Confidence 1245678888899999988644
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0083 Score=53.83 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=70.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc------CCCCCeeEEeCCCCChhHHHHhhcc-
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ------TGADRIQFHRLNIKHDSRLEGLIKM- 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~i~~~~~D~~d~~~~~~~~~~- 89 (390)
|+||-++| .|.+|..+++.|++. ||+|++.+|++++...+...... ......+++..-+.+.+.+++++.+
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~-G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~ 80 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDD 80 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSS
T ss_pred cCEEEEee-ehHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhch
Confidence 67999999 899999999999999 99999999998766554332100 0113456677777787777777643
Q ss_pred ---------ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEE
Q 016370 90 ---------ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136 (390)
Q Consensus 90 ---------~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~ 136 (390)
-++||.+.... ...++.+.+.+++.|.+||=
T Consensus 81 ~g~~~~~~~g~iiId~sT~~----------------p~~~~~~a~~~~~~G~~~lD 120 (300)
T 3obb_A 81 DGLLAHIAPGTLVLECSTIA----------------PTSARKIHAAARERGLAMLD 120 (300)
T ss_dssp SSSTTSCCC-CEEEECSCCC----------------HHHHHHHHHHHHTTTCEEEE
T ss_pred hhhhhcCCCCCEEEECCCCC----------------HHHHHHHHHHHHHcCCEEEe
Confidence 25666665321 23366777888888766653
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.002 Score=59.05 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=63.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~~~d~ 92 (390)
.+++|||+|| |-+|..+++.+... |.+|+++++++...+.+.+. +...+ .|..+.+ .+.++..++|+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-------Ga~~~-~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL-------GADLV-VNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-------TCSEE-ECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC-------CCCEE-ecCCCccHHHHHHHHhCCCCE
Confidence 4679999999 66999999999888 89999999987766554332 22222 3555432 33333356999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
||++++.. ......++.++.. .++|.++.
T Consensus 234 vid~~g~~-----------------~~~~~~~~~l~~~-G~~v~~g~ 262 (339)
T 1rjw_A 234 AVVTAVSK-----------------PAFQSAYNSIRRG-GACVLVGL 262 (339)
T ss_dssp EEESSCCH-----------------HHHHHHHHHEEEE-EEEEECCC
T ss_pred EEECCCCH-----------------HHHHHHHHHhhcC-CEEEEecc
Confidence 99998731 0123344555544 47777765
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0034 Score=56.47 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=54.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
..+.+++|+|.|+ |-+|+.+++.|... |.+|++++|+......+.. .+++.+ +.+.+.++++++|+
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~-------~g~~~~-----~~~~l~~~l~~aDv 218 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAAL-GANVKVGARSSAHLARITE-------MGLVPF-----HTDELKEHVKDIDI 218 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-------TTCEEE-----EGGGHHHHSTTCSE
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-------CCCeEE-----chhhHHHHhhCCCE
Confidence 4577899999995 99999999999988 8999999998765433221 133322 23457888889999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||.+..
T Consensus 219 Vi~~~p 224 (300)
T 2rir_A 219 CINTIP 224 (300)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 999875
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.005 Score=55.18 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=31.6
Q ss_pred CCCCE-EEEEc-Cc-----------------hhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 15 IKPVT-ICMIG-AG-----------------GFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 15 ~~~~~-vlItG-at-----------------G~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
+.+++ ||||+ || |-.|.++++.++++ |++|+.+.+..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~-Ga~V~lv~g~~ 89 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAA-GYGVLFLYRAR 89 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 45677 99984 55 99999999999999 99999998854
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0024 Score=58.91 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=49.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEe------CCC-CChhHHHHhhc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR------LNI-KHDSRLEGLIK 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~------~D~-~d~~~~~~~~~ 88 (390)
++|+|+|.|+ |.+|..++..|.+. |++|++++|++.....+.+. .++.+.. ..+ ....++.+++.
T Consensus 3 ~~mki~iiG~-G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (359)
T 1bg6_A 3 ESKTYAVLGL-GNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDR------GAIIAEGPGLAGTAHPDLLTSDIGLAVK 74 (359)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH------TSEEEESSSCCEEECCSEEESCHHHHHT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHhc------CCeEEeccccccccccceecCCHHHHHh
Confidence 4579999995 99999999999998 89999999987655444321 0111110 011 01234556677
Q ss_pred cccEEEEecc
Q 016370 89 MADLTINLAA 98 (390)
Q Consensus 89 ~~d~Vih~a~ 98 (390)
++|+||-+..
T Consensus 75 ~~D~vi~~v~ 84 (359)
T 1bg6_A 75 DADVILIVVP 84 (359)
T ss_dssp TCSEEEECSC
T ss_pred cCCEEEEeCC
Confidence 8999998764
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0012 Score=58.99 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++++|+|++ -+|+.+++.|.+. | +|++++|+.+....+............ .+.+|+.+ +.+.+.++|+|
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~-G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~---~~~~~~~~Dil 197 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKD-N-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSG---LDVDLDGVDII 197 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSS-S-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEEC---TTCCCTTCCEE
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHC-C-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEee---HHHhhCCCCEE
Confidence 3567899999986 9999999999999 8 999999987654443221100000000 01122322 13445679999
Q ss_pred EEeccccC
Q 016370 94 INLAAICT 101 (390)
Q Consensus 94 ih~a~~~~ 101 (390)
|++++...
T Consensus 198 Vn~ag~~~ 205 (287)
T 1nvt_A 198 INATPIGM 205 (287)
T ss_dssp EECSCTTC
T ss_pred EECCCCCC
Confidence 99998653
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0066 Score=56.07 Aligned_cols=95 Identities=12% Similarity=0.006 Sum_probs=53.2
Q ss_pred CCEEEEEcCchhHHHHHHH-HHHhhC--CCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCE-KILLET--PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~-~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.++|.|.||||++|+.|++ .|.+++ ..++..+..+. .-+.+... .+......+..+.+. +.++|+|
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~------~~~~~~v~~~~~~~~----~~~vDvv 72 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN-AGGKAPSF------AKNETTLKDATSIDD----LKKCDVI 72 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC-TTSBCCTT------CCSCCBCEETTCHHH----HHTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh-cCCCHHHc------CCCceEEEeCCChhH----hcCCCEE
Confidence 3689999999999999999 555553 24666654432 11111110 011111112223322 4679999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCC--cEEEeecc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK--RLIHFSTC 140 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~v~~Ss~ 140 (390)
|-|.+.. .+..++..+.+.|. ++|=.|+.
T Consensus 73 f~a~~~~------------------~s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 73 ITCQGGD------------------YTNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp EECSCHH------------------HHHHHHHHHHHTTCCSEEEECSST
T ss_pred EECCChH------------------HHHHHHHHHHHCCCCEEEEeCCcc
Confidence 9987632 14455556666773 56655553
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.013 Score=52.28 Aligned_cols=88 Identities=10% Similarity=0.078 Sum_probs=57.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEE-EEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKIL-ALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~ 92 (390)
+.++|+|.|+||-.|+.+++.+++. |++++ .+..... ... ..++.++ ..+.++.+ .+|+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~-g~~---------i~G~~vy-------~sl~el~~~~~~Dv 67 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKG-GME---------VLGVPVY-------DTVKEAVAHHEVDA 67 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT-TCE---------ETTEEEE-------SSHHHHHHHSCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCC-Cce---------ECCEEee-------CCHHHHhhcCCCCE
Confidence 3478999999999999999999998 89854 3433221 000 0133333 23555555 7999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCc-EEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR-LIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~v~~Ss 139 (390)
+|-+.- -..+..+++.|.+.|.+ +|.+++
T Consensus 68 ~Ii~vp------------------~~~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 68 SIIFVP------------------APAAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp EEECCC------------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred EEEecC------------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence 997752 12256677888888844 665554
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0079 Score=53.51 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcccccc------------------c-cCCCCCeeE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPE------------------S-QTGADRIQF 72 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~------------------~-~~~~~~i~~ 72 (390)
.+++..+|+|.| .|-+|+.+++.|... | -++.++|.+.-...++.+.. . ....-.++.
T Consensus 32 ~kL~~~~VlVvG-aGGlGs~va~~La~a-GVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~ 109 (292)
T 3h8v_A 32 EKIRTFAVAIVG-VGGVGSVTAEMLTRC-GIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV 109 (292)
T ss_dssp CGGGGCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCeEEEEC-cCHHHHHHHHHHHHc-CCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence 356667999999 577999999999999 6 57888887642221111100 0 001124566
Q ss_pred EeCCCCChhHHHHhh-----------ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 73 HRLNIKHDSRLEGLI-----------KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~-----------~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
+..++.+.+.+..++ +++|+||.+... ...-..+-++|.+.++.+|+.+..
T Consensus 110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-----------------~~~R~~in~~c~~~~~Pli~~gv~ 171 (292)
T 3h8v_A 110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-----------------FEARMTINTACNELGQTWMESGVS 171 (292)
T ss_dssp ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-----------------HHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-----------------hhhhhHHHHHHHHhCCCEEEeeee
Confidence 667777766666654 579999987631 222234557888888888887654
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0057 Score=57.48 Aligned_cols=70 Identities=16% Similarity=0.187 Sum_probs=54.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+++|+|+|+ |.+|+.+++.+.+. |++|++++ .+....... .+....+.+|+.|.+.+.++++.+|+|+-
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~l-G~~v~~~d-~~~~p~~~~-------ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRL-NIQVNVLD-ADNSPAKQI-------SAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEE-STTCTTGGG-------CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEE-CCCCcHHHh-------ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 5679999995 78999999999999 99999999 543222111 12234678899999999999999998874
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0044 Score=55.49 Aligned_cols=72 Identities=18% Similarity=0.192 Sum_probs=54.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
..+.+++|+|.| .|-+|+.+++.|... |.+|++++|+......... .+++.+ +.+.+.++++++|+
T Consensus 151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~-------~g~~~~-----~~~~l~~~l~~aDv 216 (293)
T 3d4o_A 151 FTIHGANVAVLG-LGRVGMSVARKFAAL-GAKVKVGARESDLLARIAE-------MGMEPF-----HISKAAQELRDVDV 216 (293)
T ss_dssp SCSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-------TTSEEE-----EGGGHHHHTTTCSE
T ss_pred CCCCCCEEEEEe-eCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-------CCCeec-----ChhhHHHHhcCCCE
Confidence 356789999999 699999999999988 8999999998765433221 133332 23467788889999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
|+.+..
T Consensus 217 Vi~~~p 222 (293)
T 3d4o_A 217 CINTIP 222 (293)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 999874
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0031 Score=57.88 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=50.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhhc--cccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLIK--MADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~~--~~d~ 92 (390)
.+.+|||+||+|-||..+++.+... |.+|+++ +++.....+.+. +...+. +-.+ .+.+.++.. ++|+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l-------Ga~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL-------GATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH-------TSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc-------CCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 5689999999999999999999988 9999998 666555444332 333332 2222 223333333 4999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||++++
T Consensus 220 vid~~g 225 (343)
T 3gaz_A 220 VYDTLG 225 (343)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999987
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0045 Score=58.46 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=55.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+++|+|.| +|.+|+.+++.+.+. |++|++++..+....... .-+++..|+.|.+.+.++++++|+|+
T Consensus 33 ~~~~~IlIlG-~G~lg~~~~~aa~~l-G~~v~v~d~~~~~p~~~~---------ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 33 LPGAWLGMVG-GGQLGRMFCFAAQSM-GYRVAVLDPDPASPAGAV---------ADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCTTCHHHHH---------SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEECCCCcCchhhh---------CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 4668999998 589999999999998 999999987553322111 12456789999999999998899998
Q ss_pred E
Q 016370 95 N 95 (390)
Q Consensus 95 h 95 (390)
.
T Consensus 102 ~ 102 (419)
T 4e4t_A 102 T 102 (419)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0023 Score=58.85 Aligned_cols=96 Identities=7% Similarity=0.036 Sum_probs=62.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--c
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--M 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~ 89 (390)
.+.+|||+|+ |-+|..+++.+... |. +|+++++++.....+.+. +...+ .|..+.+ .+.++.. +
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~-------Ga~~~-~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKV-------GADYV-INPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHH-------TCSEE-ECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-------CCCEE-ECCCCcCHHHHHHHHcCCCC
Confidence 5679999999 99999999999888 88 899999987665544332 22222 2444332 3333332 4
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
+|+||++++.. ......++.++.. .++|.+++
T Consensus 237 ~D~vid~~g~~-----------------~~~~~~~~~l~~~-G~iv~~g~ 268 (348)
T 2d8a_A 237 VDVFLEFSGAP-----------------KALEQGLQAVTPA-GRVSLLGL 268 (348)
T ss_dssp EEEEEECSCCH-----------------HHHHHHHHHEEEE-EEEEECCC
T ss_pred CCEEEECCCCH-----------------HHHHHHHHHHhcC-CEEEEEcc
Confidence 99999998731 1123344555444 47887775
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0046 Score=54.38 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++++|.|+++.+|+.++..|+.+ |.+|+++.++. .++.+.++++|+|
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~-gAtVtv~h~~t----------------------------~~L~~~~~~ADIV 207 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHIKT----------------------------KDLSLYTRQADLI 207 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTC----------------------------SCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCc----------------------------hhHHHHhhcCCEE
Confidence 578999999999999999999999999 99999987642 2367778889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|...+..
T Consensus 208 I~Avg~p 214 (285)
T 3p2o_A 208 IVAAGCV 214 (285)
T ss_dssp EECSSCT
T ss_pred EECCCCC
Confidence 9988743
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0026 Score=55.34 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=33.5
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
...+.+|+|.|.| .|.+|..+++.|.+. |++|++.+|+++.
T Consensus 14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~~-G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 14 NLYFQGMKIAVLG-TGTVGRTMAGALADL-GHEVTIGTRDPKA 54 (245)
T ss_dssp -----CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHH
T ss_pred ccccCCCeEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence 3456778999997 999999999999998 9999999998765
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0026 Score=58.79 Aligned_cols=74 Identities=14% Similarity=0.047 Sum_probs=52.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh-hHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD-SRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~-~~~~~~~~~~d~Vi 94 (390)
.+.+|||+|+ |-+|..+++.+... |.+|+++++++.....+.+. +...+ .|..+. +..+.+..++|+||
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l-------Ga~~v-~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM-------GADHY-IATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-------TCSEE-EEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-------CCCEE-EcCcCchHHHHHhhcCCCEEE
Confidence 4679999999 99999999999888 89999999887766554432 22221 233333 33333334699999
Q ss_pred Eeccc
Q 016370 95 NLAAI 99 (390)
Q Consensus 95 h~a~~ 99 (390)
++++.
T Consensus 249 d~~g~ 253 (360)
T 1piw_A 249 VCASS 253 (360)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99875
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0044 Score=57.60 Aligned_cols=77 Identities=18% Similarity=0.186 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCC----------------CC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN----------------IK 78 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D----------------~~ 78 (390)
+.+.+|+|+|+ |-+|...++.|... |.+|+++++++.....+... +.+++..+ ++
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~-------G~~~~~~~~~~~~d~~~~~~ya~e~s 258 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL-------GAKFIAVEDEEFKAAETAGGYAKEMS 258 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT-------TCEECCCCC-----------------
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-------CCceeecccccccccccccchhhhcc
Confidence 45679999997 99999999999998 99999999998765544331 22232221 22
Q ss_pred C------hhHHHHhhccccEEEEecccc
Q 016370 79 H------DSRLEGLIKMADLTINLAAIC 100 (390)
Q Consensus 79 d------~~~~~~~~~~~d~Vih~a~~~ 100 (390)
+ .+.+.++++++|+||.++...
T Consensus 259 ~~~~~~~~~~l~e~l~~aDVVI~tvlip 286 (405)
T 4dio_A 259 GEYQVKQAALVAEHIAKQDIVITTALIP 286 (405)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred hhhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence 2 347888889999999987544
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.004 Score=57.21 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=51.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC--hhHHHHhh-ccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH--DSRLEGLI-KMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d--~~~~~~~~-~~~d~ 92 (390)
.+.+|||+||+|-+|...++.+... |.+|+++++++...+.+.+. +...+ .|..+ .+.+.++- +++|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-------Ga~~v-i~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM-------GADIV-LNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH-------TCSEE-ECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-------CCcEE-EECCccHHHHHHHhCCCCccE
Confidence 4679999999999999999999888 89999999987766555442 22222 12222 23343332 24999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||++++
T Consensus 221 v~d~~g 226 (346)
T 3fbg_A 221 VFCTFN 226 (346)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999986
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0053 Score=57.07 Aligned_cols=74 Identities=16% Similarity=0.113 Sum_probs=49.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh--ccccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI--KMADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~--~~~d~V 93 (390)
.+.+|||+||+|-||..+++.+... |.+|+++++ +.....+.+. +...+ .|..+.+..+.+. .++|+|
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~~-~~~~~~~~~l-------Ga~~v-~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVCS-QDASELVRKL-------GADDV-IDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC-GGGHHHHHHT-------TCSEE-EETTSSCHHHHHHTSCCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeC-hHHHHHHHHc-------CCCEE-EECCchHHHHHHhhcCCCCEE
Confidence 5689999999999999999998888 899998874 3443333221 22221 2444433223222 369999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|+++|.
T Consensus 253 id~~g~ 258 (375)
T 2vn8_A 253 LDNVGG 258 (375)
T ss_dssp EESSCT
T ss_pred EECCCC
Confidence 999873
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0032 Score=58.05 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=48.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc---cE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA---DL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~---d~ 92 (390)
++|+|.|.| .|.+|..+++.|.+. |++|++++|++.....+... ++. ...++.+++.++ |+
T Consensus 21 ~~mkIgiIG-lG~mG~~~A~~L~~~-G~~V~v~dr~~~~~~~l~~~-------g~~-------~~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 21 QSMQIGMIG-LGRMGADMVRRLRKG-GHECVVYDLNVNAVQALERE-------GIA-------GARSIEEFCAKLVKPRV 84 (358)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT-------TCB-------CCSSHHHHHHHSCSSCE
T ss_pred cCCEEEEEC-chHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHC-------CCE-------EeCCHHHHHhcCCCCCE
Confidence 458999998 899999999999999 99999999998776655431 221 122344455544 99
Q ss_pred EEEec
Q 016370 93 TINLA 97 (390)
Q Consensus 93 Vih~a 97 (390)
||-+.
T Consensus 85 Vi~~v 89 (358)
T 4e21_A 85 VWLMV 89 (358)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99875
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.004 Score=57.79 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=53.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|||+|+ |-+|...++.+... |.+|+++++++.....+.+. +...+ .|..+.+.++++..++|+||+
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l-------Ga~~v-i~~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL-------GADEV-VNSRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-------TCSEE-EETTCHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCcEE-eccccHHHHHHhhcCCCEEEE
Confidence 4679999998 77999999988888 99999999887766544432 22221 345555555555567999999
Q ss_pred eccc
Q 016370 96 LAAI 99 (390)
Q Consensus 96 ~a~~ 99 (390)
+++.
T Consensus 264 ~~g~ 267 (369)
T 1uuf_A 264 TVAA 267 (369)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9874
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0086 Score=55.67 Aligned_cols=69 Identities=19% Similarity=0.147 Sum_probs=52.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|+|+|+ |.+|+.+++.|.+. |++|++++..+....... .-.++..|..|.+.+.++++++|+|+-.
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~-G~~v~~~~~~~~~~~~~~---------~~~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKM-GFYVIVLDPTPRSPAGQV---------ADEQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESSTTCTTGGG---------SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhh---------CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence 578999996 78999999999988 999999987543321110 1135678899999999888889998853
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0031 Score=57.26 Aligned_cols=67 Identities=10% Similarity=0.157 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.++|+|.|.| .|.+|..+++.|.+. |++|++++|+++....+... ++.. ..++.++++++|+||
T Consensus 29 ~~~~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~l~~~-------g~~~-------~~~~~e~~~~aDvVi 92 (320)
T 4dll_A 29 PYARKITFLG-TGSMGLPMARRLCEA-GYALQVWNRTPARAASLAAL-------GATI-------HEQARAAARDADIVV 92 (320)
T ss_dssp CCCSEEEEEC-CTTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT-------TCEE-------ESSHHHHHTTCSEEE
T ss_pred cCCCEEEEEC-ccHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHC-------CCEe-------eCCHHHHHhcCCEEE
Confidence 4568999997 699999999999998 99999999998776655431 3322 235667788899999
Q ss_pred Eec
Q 016370 95 NLA 97 (390)
Q Consensus 95 h~a 97 (390)
-+.
T Consensus 93 ~~v 95 (320)
T 4dll_A 93 SML 95 (320)
T ss_dssp ECC
T ss_pred EEC
Confidence 775
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.025 Score=50.47 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=54.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vi 94 (390)
.+|+|.|++|-.|+.+++.|++. |++++.-. ++... .. ..++.++ .++.++.+ .+|++|
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~V-nP~~~g~~---------i~G~~vy-------~sl~el~~~~~~Dv~i 75 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC-GTKIVGGV-TPGKGGQN---------VHGVPVF-------DTVKEAVKETDANASV 75 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCCEEEEE-CTTCTTCE---------ETTEEEE-------SSHHHHHHHHCCCEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHhC-CCeEEEEe-CCCCCCce---------ECCEeee-------CCHHHHhhcCCCCEEE
Confidence 46888899999999999999997 88843222 22211 10 0133333 24556666 799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCc-EEEeec
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR-LIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~v~~Ss 139 (390)
-+.- -..+..+++.|.+.|.+ +|.+++
T Consensus 76 i~vp------------------~~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 76 IFVP------------------APFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp ECCC------------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred EccC------------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence 7752 12255677888888855 555554
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0084 Score=54.58 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=53.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeE---EEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKI---LALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|||.|.||+|++|+.|++.|.++ ++.+ +.+.........+. . ....+.+...| ++ . + ++|+||
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~-~~~~~~l~~~~s~~~~g~~l~-~----~g~~i~v~~~~---~~---~-~-~~DvV~ 66 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEAR-NFPLSELRLYASPRSAGVRLA-F----RGEEIPVEPLP---EG---P-L-PVDLVL 66 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCCCSCCEEEECGGGSSCEEE-E----TTEEEEEEECC---SS---C-C-CCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCcEEEEEeeccccCCCEEE-E----cCceEEEEeCC---hh---h-c-CCCEEE
Confidence 58999999999999999999976 5543 33221111101110 0 01123333332 22 2 3 899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
-+.+.. .+...+....+.|.++|-.|+..
T Consensus 67 ~a~g~~------------------~s~~~a~~~~~~G~~vId~s~~~ 95 (331)
T 2yv3_A 67 ASAGGG------------------ISRAKALVWAEGGALVVDNSSAW 95 (331)
T ss_dssp ECSHHH------------------HHHHHHHHHHHTTCEEEECSSSS
T ss_pred ECCCcc------------------chHHHHHHHHHCCCEEEECCCcc
Confidence 988632 13445555566777888888763
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0019 Score=57.64 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=50.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||+|.|.| .|.+|..+++.|.+. |++|++.+|++.....+... ++.. ..+..++++++|+||-+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-------g~~~-------~~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRA-GFDVTVWNRNPAKCAPLVAL-------GARQ-------ASSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHH-TCCEEEECSSGGGGHHHHHH-------TCEE-------CSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC-------CCee-------cCCHHHHHHcCCEEEEE
Confidence 57899998 899999999999999 99999999998766554431 2221 23466677789999987
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
..
T Consensus 65 v~ 66 (287)
T 3pdu_A 65 LA 66 (287)
T ss_dssp CS
T ss_pred cC
Confidence 63
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.012 Score=54.83 Aligned_cols=71 Identities=18% Similarity=0.101 Sum_probs=54.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|+| +|.+|+.+++.+.+. |++|++++..+...... -.-..+..++.|.+.+.++++.+|+|
T Consensus 11 ~~~~k~IlIlG-~G~~g~~la~aa~~~-G~~vi~~d~~~~~~~~~---------~ad~~~~~~~~d~~~l~~~~~~~dvI 79 (389)
T 3q2o_A 11 ILPGKTIGIIG-GGQLGRMMALAAKEM-GYKIAVLDPTKNSPCAQ---------VADIEIVASYDDLKAIQHLAEISDVV 79 (389)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSTTCTTTT---------TCSEEEECCTTCHHHHHHHHHTCSEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEeCCCCCchHH---------hCCceEecCcCCHHHHHHHHHhCCEe
Confidence 45778999998 667999999999998 99999998765322111 01235568899999999999999988
Q ss_pred EE
Q 016370 94 IN 95 (390)
Q Consensus 94 ih 95 (390)
..
T Consensus 80 ~~ 81 (389)
T 3q2o_A 80 TY 81 (389)
T ss_dssp EE
T ss_pred ee
Confidence 43
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0098 Score=46.65 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCc---hhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 15 IKPVTICMIGAG---GFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 15 ~~~~~vlItGat---G~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
+++++|.|.|+| |.+|..+++.|++. ||+|+.++.+.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vnp~~ 51 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPNY 51 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTC
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeCCCC
Confidence 467899999997 99999999999998 99988877653
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0034 Score=60.42 Aligned_cols=84 Identities=18% Similarity=0.213 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCChhhhccccccccCCCCCee-EE----eCCCCChhHHHHhhc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYNDKIKHLLEPESQTGADRIQ-FH----RLNIKHDSRLEGLIK 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~-~~----~~D~~d~~~~~~~~~ 88 (390)
+++|+|.|.| .|++|..++..|.+.+ |++|+++++++.....+......-...++. .+ .+.+.-..++.+++.
T Consensus 7 ~~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~ 85 (481)
T 2o3j_A 7 GKVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA 85 (481)
T ss_dssp CCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh
Confidence 3468999998 7999999999999984 699999999887776654321100001100 00 001111123445567
Q ss_pred cccEEEEeccc
Q 016370 89 MADLTINLAAI 99 (390)
Q Consensus 89 ~~d~Vih~a~~ 99 (390)
++|+||-+...
T Consensus 86 ~aDvvii~Vpt 96 (481)
T 2o3j_A 86 EADLIFISVNT 96 (481)
T ss_dssp HCSEEEECCCC
T ss_pred cCCEEEEecCC
Confidence 79999988753
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0072 Score=54.34 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|+|.|++..+|+.+++.|+.. |.+|++++|+............ ...........++++++.+.++++|+|
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~~ADIV 249 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSLDSDVV 249 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhccCCEE
Confidence 578899999999999999999999999 8999999887543322221110 000111111113347899999999999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-+.+..
T Consensus 250 IsAtg~p 256 (320)
T 1edz_A 250 ITGVPSE 256 (320)
T ss_dssp EECCCCT
T ss_pred EECCCCC
Confidence 9888754
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.005 Score=55.26 Aligned_cols=53 Identities=21% Similarity=0.198 Sum_probs=43.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
+++|.|.||.|.+|..++..|.+. |++|++++|++. .+..+++.++|+||-+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~~---------------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDW---------------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCG---------------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCcc---------------------------cCHHHHhcCCCEEEEe
Confidence 358999999999999999999998 899999988642 1244566778888876
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 73 v 73 (298)
T 2pv7_A 73 V 73 (298)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.011 Score=53.22 Aligned_cols=110 Identities=11% Similarity=0.069 Sum_probs=72.3
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc-ccccc--CCCCCeeEEe-CCCCChhHHHHhhccccEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL-EPESQ--TGADRIQFHR-LNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~-~~~~~--~~~~~i~~~~-~D~~d~~~~~~~~~~~d~V 93 (390)
||.|+|| |.+|..++..|... +. +|.++++.+...+... +.... ......++.. .| . +.++++|+|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~-~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMR-GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS------Y-EDMRGSDIV 71 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHH-TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC------G-GGGTTCSEE
T ss_pred CEEEECc-CHHHHHHHHHHHhC-CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC------H-HHhCCCCEE
Confidence 5899998 99999999999988 76 6999999875443211 10000 0011222222 22 2 357899999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
|-+++.... ...........|+.-.+.+++.+.+.. ..+|.+|-
T Consensus 72 i~~ag~~~k--~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 72 LVTAGIGRK--PGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp EECCSCCCC--SSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999987542 223344567789888999998888766 56666653
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0025 Score=57.90 Aligned_cols=73 Identities=11% Similarity=0.092 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|||+||+|-+|...++.+... |.+|+++.+... ...+.+. +... ..|..+.+.+.+.++++|+||+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~-~~~~~~l-------Ga~~-~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRN-HAFLKAL-------GAEQ-CINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHH-HHHHHHH-------TCSE-EEETTTSCHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccch-HHHHHHc-------CCCE-EEeCCCcchhhhhccCCCEEEE
Confidence 5689999999999999999999988 899998875432 3332221 2222 2344554446677788999999
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+.|
T Consensus 222 ~~g 224 (321)
T 3tqh_A 222 LVG 224 (321)
T ss_dssp SSC
T ss_pred CCC
Confidence 987
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0054 Score=57.20 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC---------------
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK--------------- 78 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~--------------- 78 (390)
.+.+++|+|+|+ |-+|..+++.+... |.+|+++++++......... +.+++..|..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~~-------Ga~~~~i~~~~~~~~~~~~~~~~~~ 239 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRL-GAVVMATDVRAATKEQVESL-------GGKFITVDDEAMKTAETAGGYAKEM 239 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHT-------TCEECCC------------------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-------CCeEEeecccccccccccccchhhc
Confidence 356789999995 99999999999988 89999999987654433221 2222211111
Q ss_pred -------ChhHHHHhhccccEEEEecc
Q 016370 79 -------HDSRLEGLIKMADLTINLAA 98 (390)
Q Consensus 79 -------d~~~~~~~~~~~d~Vih~a~ 98 (390)
..+.+.+++.++|+||+++.
T Consensus 240 s~~~~~~~~~~l~~~~~~aDvVi~~~~ 266 (384)
T 1l7d_A 240 GEEFRKKQAEAVLKELVKTDIAITTAL 266 (384)
T ss_dssp -----CCHHHHHHHHHTTCSEEEECCC
T ss_pred CHHHHhhhHHHHHHHhCCCCEEEECCc
Confidence 12347778888999999883
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0019 Score=60.79 Aligned_cols=82 Identities=24% Similarity=0.308 Sum_probs=50.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCee-EE---eCCCCChhHHHHhhc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ-FH---RLNIKHDSRLEGLIK 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~-~~---~~D~~d~~~~~~~~~ 88 (390)
+.+.+|+|.|.| +|++|..++..|.+ |++|+++++++.....+.+....-..++++ ++ .+.+.-..++.++++
T Consensus 32 r~~~~mkIaVIG-lG~mG~~lA~~La~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 32 RGSEFMKITISG-TGYVGLSNGVLIAQ--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp ---CCCEEEEEC-CSHHHHHHHHHHHT--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccCCCEEEEEC-cCHHHHHHHHHHHc--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 445678999998 69999999997764 899999999987766554421100000000 00 011211234566778
Q ss_pred cccEEEEec
Q 016370 89 MADLTINLA 97 (390)
Q Consensus 89 ~~d~Vih~a 97 (390)
++|+||-+.
T Consensus 109 ~aDvViiaV 117 (432)
T 3pid_A 109 NADYVIIAT 117 (432)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEeC
Confidence 899999875
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0045 Score=55.15 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=34.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH 57 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~ 57 (390)
++++|.|.| .|.+|+.++..|.+. |++|++++++++....
T Consensus 3 ~~~kV~VIG-aG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~ 42 (283)
T 4e12_A 3 GITNVTVLG-TGVLGSQIAFQTAFH-GFAVTAYDINTDALDA 42 (283)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHH
Confidence 457999998 599999999999998 9999999998765543
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0025 Score=55.91 Aligned_cols=68 Identities=21% Similarity=0.295 Sum_probs=49.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+||+|.|.| .|.+|+.+++.|.+. |++|.+++|+++....+.+. -++.. ..++.+++.++|+||-
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~------~g~~~-------~~~~~~~~~~~D~Vi~ 66 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQT-PHELIISGSSLERSKEIAEQ------LALPY-------AMSHQDLIDQVDLVIL 66 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTS-SCEEEEECSSHHHHHHHHHH------HTCCB-------CSSHHHHHHTCSEEEE
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhC-CCeEEEECCCHHHHHHHHHH------cCCEe-------eCCHHHHHhcCCEEEE
Confidence 357999999 799999999999988 89999999987665543321 01111 1235566678999998
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+.-
T Consensus 67 ~v~ 69 (259)
T 2ahr_A 67 GIK 69 (259)
T ss_dssp CSC
T ss_pred EeC
Confidence 763
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0071 Score=57.79 Aligned_cols=45 Identities=20% Similarity=0.201 Sum_probs=38.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCCh----hhhcccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYND----KIKHLLE 60 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~----~~~~~~~ 60 (390)
+.+|||.|.| .|++|..++..|.+.+|+ +|+++++++. ....+.+
T Consensus 16 ~~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~ 65 (478)
T 3g79_A 16 GPIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNR 65 (478)
T ss_dssp CSCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTT
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHh
Confidence 4568999998 899999999999987689 9999999988 6655543
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0036 Score=55.87 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=49.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|+|.|.| .|.+|..+++.|.+. |++|++.+|++.....+... ++.. ..++.+++.++|+||-+.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-------g~~~-------~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAAL-------GAER-------AATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHT-------TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC-------CCee-------cCCHHHHHhcCCEEEEEc
Confidence 6899998 699999999999998 99999999988766654431 2221 234667777899999775
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0075 Score=53.47 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHH--Hhhcccc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLE--GLIKMAD 91 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~--~~~~~~d 91 (390)
++.+++++|.|++|.+|+.++..|+++ |.+|+++.|+.. ++. +.++++|
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~~~~T~----------------------------~l~l~~~~~~AD 212 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKE-NATVTIVHSGTS----------------------------TEDMIDYLRTAD 212 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTSC----------------------------HHHHHHHHHTCS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCCC----------------------------CchhhhhhccCC
Confidence 578899999999999999999999999 999999887431 244 7788899
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
+||.+.+..
T Consensus 213 IVI~Avg~p 221 (300)
T 4a26_A 213 IVIAAMGQP 221 (300)
T ss_dssp EEEECSCCT
T ss_pred EEEECCCCC
Confidence 999988753
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0056 Score=56.47 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=54.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc-cccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.+.+|||+|+ |-||...++.+... |.+|+++++++....... +. +...+ .|..+.+.+.++..++|+||
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~l-------Ga~~v-i~~~~~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDL-------GADDY-VIGSDQAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTS-------CCSCE-EETTCHHHHHHSTTTEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHc-------CCcee-eccccHHHHHHhcCCCCEEE
Confidence 5679999995 88999999999888 899999999876655443 21 22111 23445566666666799999
Q ss_pred Eeccc
Q 016370 95 NLAAI 99 (390)
Q Consensus 95 h~a~~ 99 (390)
++++.
T Consensus 250 d~~g~ 254 (357)
T 2cf5_A 250 DTVPV 254 (357)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 99874
|
| >1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0079 Score=54.88 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=57.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCCCCCeeEEe-----------CCCCChhHHH
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHR-----------LNIKHDSRLE 84 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~i~~~~-----------~D~~d~~~~~ 84 (390)
|+||.|.|+ |++|+.+++.|.+.++.++.++. +.+......... .+...+. .++.-.....
T Consensus 1 mikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~------~g~~~~~~~~~~v~~~~~~~l~v~~~~~ 73 (337)
T 1cf2_P 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALK------KGYDLYVAIPERVKLFEKAGIEVAGTVD 73 (337)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHH------TTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred CeEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCC------cchhhccccccceeeecCCceEEcCCHH
Confidence 468999999 99999999999986678877664 332211111110 0001110 1111112345
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
+++.++|+||.+++... +...+..+.+.|+++|..|+.
T Consensus 74 ~~~~~vDvV~~atp~~~------------------~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 74 DMLDEADIVIDCTPEGI------------------GAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp HHHHTCSEEEECCSTTH------------------HHHHHHHHHHHTCCEEECTTS
T ss_pred HHhcCCCEEEECCCchh------------------hHHHHHHHHHcCCEEEEecCC
Confidence 56678999999976321 233445566667676666654
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0048 Score=54.67 Aligned_cols=71 Identities=18% Similarity=0.266 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+|+|+|.|+ |-+|+.+++.|.+. |++|++++|+.+....+... -+++. .+ ++.++++++|+||
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~-g~~V~v~~r~~~~~~~l~~~------~g~~~--~~-----~~~~~~~~aDiVi 191 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKE-GAKVFLWNRTKEKAIKLAQK------FPLEV--VN-----SPEEVIDKVQVIV 191 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHH-TCEEEEECSSHHHHHHHTTT------SCEEE--CS-----CGGGTGGGCSEEE
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHH------cCCee--eh-----hHHhhhcCCCEEE
Confidence 56789999995 88999999999999 88999999987665544331 12222 11 3445667899999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
.+....
T Consensus 192 ~atp~~ 197 (275)
T 2hk9_A 192 NTTSVG 197 (275)
T ss_dssp ECSSTT
T ss_pred EeCCCC
Confidence 987644
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.011 Score=53.38 Aligned_cols=70 Identities=11% Similarity=0.190 Sum_probs=54.0
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
....+.+|+|.|.| .|-||+.+++.|... |++|++.+|++.... ++.... ..+++.++++++
T Consensus 133 ~~~~l~g~tvGIiG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~------------~~~~~~----~~~~l~ell~~a 194 (315)
T 3pp8_A 133 PEYTREEFSVGIMG-AGVLGAKVAESLQAW-GFPLRCWSRSRKSWP------------GVESYV----GREELRAFLNQT 194 (315)
T ss_dssp CCCCSTTCCEEEEC-CSHHHHHHHHHHHTT-TCCEEEEESSCCCCT------------TCEEEE----SHHHHHHHHHTC
T ss_pred CCCCcCCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEcCCchhhh------------hhhhhc----ccCCHHHHHhhC
Confidence 34567889999999 799999999999988 999999998764322 222221 136789999999
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+|+-+.-
T Consensus 195 DiV~l~~P 202 (315)
T 3pp8_A 195 RVLINLLP 202 (315)
T ss_dssp SEEEECCC
T ss_pred CEEEEecC
Confidence 99998764
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0075 Score=53.06 Aligned_cols=58 Identities=14% Similarity=0.206 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++++|.|++|.+|+.++..|+.+ |.+|+++.++. .++.+.++++|+|
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t----------------------------~~L~~~~~~ADIV 208 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHRFT----------------------------TDLKSHTTKADIL 208 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTC----------------------------SSHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCc----------------------------hhHHHhcccCCEE
Confidence 578899999999999999999999999 89999887532 2367788899999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.+.+..
T Consensus 209 I~Avg~p 215 (285)
T 3l07_A 209 IVAVGKP 215 (285)
T ss_dssp EECCCCT
T ss_pred EECCCCC
Confidence 9988743
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.006 Score=57.14 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC-------------Ch-
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-------------HD- 80 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~-------------d~- 80 (390)
+.+++|+|+|+ |-+|..+++.+... |.+|+++++++.......+. +.+++..|.. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~l-------Ga~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSM-------GAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHHT-------TCEECCC--------CCHHHHHHSHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-------CCEEEEecccccccccccchhhccHH
Confidence 46789999995 99999999999988 89999999987665443321 3333322221 11
Q ss_pred ------hHHHHhhccccEEEEeccc
Q 016370 81 ------SRLEGLIKMADLTINLAAI 99 (390)
Q Consensus 81 ------~~~~~~~~~~d~Vih~a~~ 99 (390)
+.+.+++.++|+||.+++.
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~ 265 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALI 265 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcc
Confidence 1467777789999998654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0044 Score=58.24 Aligned_cols=73 Identities=14% Similarity=0.180 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+++|+|+|+ |-+|+.+++.|... |. +|++++|+......+... -+.+. . +.+++.+++.++|+|
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~-G~~~V~v~~r~~~ra~~la~~------~g~~~--~---~~~~l~~~l~~aDvV 231 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARD------LGGEA--V---RFDELVDHLARSDVV 231 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHH------HTCEE--C---CGGGHHHHHHTCSEE
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHH------cCCce--e---cHHhHHHHhcCCCEE
Confidence 57889999997 99999999999998 88 899999987654322211 02222 1 223567777889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.+.+..
T Consensus 232 i~at~~~ 238 (404)
T 1gpj_A 232 VSATAAP 238 (404)
T ss_dssp EECCSSS
T ss_pred EEccCCC
Confidence 9997543
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0024 Score=56.56 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=50.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-ccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI-KMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~-~~~d~ 92 (390)
.+++++|+|+|+ |-+|+.++..|.+. |.+|++++|+.++.+.+...... . ..+.. .|+ + ++. .++|+
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~-G~~v~v~~R~~~~a~~l~~~~~~-~-~~~~~--~~~---~---~~~~~~~Di 183 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQP-Y-GNIQA--VSM---D---SIPLQTYDL 183 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGG-G-SCEEE--EEG---G---GCCCSCCSE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHccc-c-CCeEE--eeH---H---HhccCCCCE
Confidence 356789999998 66999999999999 79999999987665544322110 0 01222 222 1 111 37999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||++++..
T Consensus 184 vIn~t~~~ 191 (272)
T 1p77_A 184 VINATSAG 191 (272)
T ss_dssp EEECCCC-
T ss_pred EEECCCCC
Confidence 99998754
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0088 Score=56.72 Aligned_cols=80 Identities=20% Similarity=0.174 Sum_probs=54.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeE------EeCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF------HRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~------~~~D~~d~~~~~~~~~~~d 91 (390)
.+|.|.| .|++|..++..|.+. |++|+++++++.....+.+.......++++- ..+.+.-..++.++++++|
T Consensus 9 ~~~~vIG-lG~vG~~~A~~La~~-G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIG-TGYVGLVSGACFSDF-GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEc-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 4799999 899999999999999 9999999999987776655321111111110 0011221234667778899
Q ss_pred EEEEeccc
Q 016370 92 LTINLAAI 99 (390)
Q Consensus 92 ~Vih~a~~ 99 (390)
+||-+...
T Consensus 87 vvii~Vpt 94 (446)
T 4a7p_A 87 AVFIAVGT 94 (446)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99988643
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0045 Score=59.44 Aligned_cols=82 Identities=16% Similarity=0.211 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCee-EE-----eCCCCChhHHHHhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ-FH-----RLNIKHDSRLEGLIKM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~-~~-----~~D~~d~~~~~~~~~~ 89 (390)
..|+|.|.| .|++|..++..|.+. |++|+++++++.....+.+.......++++ .+ .+.+.-..++.+++++
T Consensus 7 ~~~~I~VIG-~G~vG~~lA~~la~~-G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 7 GSMNLTIIG-SGSVGLVTGACLADI-GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CCceEEEEC-cCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 348999998 899999999999998 999999999887766655421111111110 00 0011111234456677
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||-+...
T Consensus 85 aDvviiaVpt 94 (478)
T 2y0c_A 85 GDVQFIAVGT 94 (478)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEEeCC
Confidence 9999988653
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0041 Score=57.20 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=51.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|||+|+ |-+|...++.+... |.+|+++++++.+...+.+. +...+. .+.+.+.+ ++|+||+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-------Ga~~v~---~~~~~~~~---~~D~vid 240 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM-------GVKHFY---TDPKQCKE---ELDFIIS 240 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT-------TCSEEE---SSGGGCCS---CEEEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc-------CCCeec---CCHHHHhc---CCCEEEE
Confidence 5689999997 99999999998888 89999999988776655442 233332 33333322 7999999
Q ss_pred eccc
Q 016370 96 LAAI 99 (390)
Q Consensus 96 ~a~~ 99 (390)
+++.
T Consensus 241 ~~g~ 244 (348)
T 3two_A 241 TIPT 244 (348)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 9874
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0036 Score=55.71 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC---eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH---KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
|++|+|.|.|+ |.+|+.+++.|.+. |+ +|++.+|++.....+.+. -++... .+..++++++|
T Consensus 1 M~~~~I~iIG~-G~mG~aia~~l~~~-g~~~~~V~v~dr~~~~~~~l~~~------~gi~~~-------~~~~~~~~~aD 65 (280)
T 3tri_A 1 MNTSNITFIGG-GNMARNIVVGLIAN-GYDPNRICVTNRSLDKLDFFKEK------CGVHTT-------QDNRQGALNAD 65 (280)
T ss_dssp -CCSCEEEESC-SHHHHHHHHHHHHT-TCCGGGEEEECSSSHHHHHHHHT------TCCEEE-------SCHHHHHSSCS
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHC-CCCCCeEEEEeCCHHHHHHHHHH------cCCEEe-------CChHHHHhcCC
Confidence 34679999995 99999999999998 88 899999998776655431 133321 23556678899
Q ss_pred EEEEec
Q 016370 92 LTINLA 97 (390)
Q Consensus 92 ~Vih~a 97 (390)
+||-+.
T Consensus 66 vVilav 71 (280)
T 3tri_A 66 VVVLAV 71 (280)
T ss_dssp EEEECS
T ss_pred eEEEEe
Confidence 999876
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0074 Score=53.06 Aligned_cols=57 Identities=18% Similarity=0.302 Sum_probs=48.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+++++|.|++|.+|+.++..|+.+ |.+|+++.++. .++.+.++++|+|
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~-gAtVtv~hs~T----------------------------~~L~~~~~~ADIV 208 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLG-GCTVTVTHRFT----------------------------RDLADHVSRADLV 208 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHT-TCEEEEECTTC----------------------------SCHHHHHHTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCC----------------------------cCHHHHhccCCEE
Confidence 578999999999999999999999999 99999987532 1366778889999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|...+.
T Consensus 209 I~Avg~ 214 (286)
T 4a5o_A 209 VVAAGK 214 (286)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998874
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0058 Score=53.35 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+.+ +|+|+|+ |-.|+.++..|.+. |. +|++++|+.++.+.+.+ .+... ..+++.+++.++|+|
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~-G~~~I~v~nR~~~ka~~la~--------~~~~~-----~~~~~~~~~~~aDiV 170 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQM-GVKDIWVVNRTIERAKALDF--------PVKIF-----SLDQLDEVVKKAKSL 170 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHT-TCCCEEEEESCHHHHHTCCS--------SCEEE-----EGGGHHHHHHTCSEE
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHH--------HcccC-----CHHHHHhhhcCCCEE
Confidence 466 8999996 88999999999998 87 89999998877665543 22211 234567778889999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|++...
T Consensus 171 Inatp~ 176 (253)
T 3u62_A 171 FNTTSV 176 (253)
T ss_dssp EECSST
T ss_pred EECCCC
Confidence 998743
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.026 Score=51.85 Aligned_cols=108 Identities=20% Similarity=0.251 Sum_probs=70.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccc--------------------cCCCCCeeE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPES--------------------QTGADRIQF 72 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~i~~ 72 (390)
+++..+|+|.|+ |-+|+.++..|... | -++.++++..-...++.+... ....-.++.
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~a-Gvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~ 192 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATS-GIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE 192 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHH-TCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhC-CCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence 345679999996 66999999999999 6 578888886432222221100 000124666
Q ss_pred EeCCCCChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHH-HHHHHHHhCCCcEEEeeccc
Q 016370 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL-PVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 73 ~~~D~~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~-~l~~~~~~~~~~~v~~Ss~~ 141 (390)
+..++.+..++.. +.++|+||.+.... ..++ .+-++|.+.++.+|+.+...
T Consensus 193 ~~~~i~~~~~~~~-~~~~DlVvd~~Dn~-----------------~~~r~~ln~~c~~~~~p~i~~~~~g 244 (353)
T 3h5n_A 193 IALNINDYTDLHK-VPEADIWVVSADHP-----------------FNLINWVNKYCVRANQPYINAGYVN 244 (353)
T ss_dssp EECCCCSGGGGGG-SCCCSEEEECCCCS-----------------TTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred eecccCchhhhhH-hccCCEEEEecCCh-----------------HHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 7777777665666 88999999976321 1122 34468888888899887643
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0092 Score=54.51 Aligned_cols=99 Identities=14% Similarity=0.157 Sum_probs=59.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe-cCChhhhccccccccCCCCCeeEEeC-CC---------CChhHHHH
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRL-NI---------KHDSRLEG 85 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~i~~~~~-D~---------~d~~~~~~ 85 (390)
|+||.|.|+ |.+|+.+++.|.+.++.++.++. +........... .++.++.. |. .-.+++++
T Consensus 1 ~ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~------~g~~~~~~~~~~~~~~~~~v~v~~~~e~ 73 (340)
T 1b7g_O 1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR------RGIRIYVPQQSIKKFEESGIPVAGTVED 73 (340)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH------TTCCEECCGGGHHHHHTTTCCCCCCHHH
T ss_pred CeEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHh------cCcceecCcCHHHHhcccccccccCHhH
Confidence 358999999 99999999999987678877664 332222111110 12333322 11 01112334
Q ss_pred hhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 86 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
++.++|+||-+.+.. .+......+.+.|.++|..|+.
T Consensus 74 l~~~vDvV~~aTp~~------------------~s~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 74 LIKTSDIVVDTTPNG------------------VGAQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHCSEEEECCSTT------------------HHHHHHHHHHHTTCEEEECTTS
T ss_pred hhcCCCEEEECCCCc------------------hhHHHHHHHHHcCCeEEEeCCC
Confidence 456799999987532 1334556666778778888875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 390 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 8e-51 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-46 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-40 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-36 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 4e-33 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-32 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-30 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 5e-30 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 7e-30 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 4e-28 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-27 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 1e-25 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 3e-25 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 3e-24 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-23 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-22 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 1e-22 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 5e-17 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 4e-15 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 4e-13 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 9e-13 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 1e-10 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 1e-08 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 3e-08 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 8e-05 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 1e-04 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 9e-04 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (432), Expect = 8e-51
Identities = 86/351 (24%), Positives = 137/351 (39%), Gaps = 51/351 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K L+ H++ +D + K +E I + +
Sbjct: 4 ILITGGAGFVGSHLTDK-LMMDGHEVTVVDNFFTGRKRNVE-------HWIGHENFELIN 55
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 56 HDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 115
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG DP + ED + + R Y K++ E + YA
Sbjct: 116 SEVYG---------------DPEVHPQSEDYWGHV--NPIGPRACYDEGKRVAETMCYAY 158
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ G+E + R FN GPRM RV++ F L+ +PL + G
Sbjct: 159 MKQEGVEVRVARIFNTFGPRMHM---------NDGRVVSNFILQALQGEPLTVYGSGSQT 209
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F Y+ D + ++ ++ + N+GNP + + V +
Sbjct: 210 RAFQYVSDLVNGLVALMNSN---VSSPVNLGNPEEHTILEFAQLIKNLVGSG-------- 258
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S +F E DD KR PD+ LGW P L + L + Y
Sbjct: 259 ------SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 303
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 159 bits (403), Expect = 5e-46
Identities = 66/375 (17%), Positives = 134/375 (35%), Gaps = 46/375 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGS + I+ T ++ +D +L + ++R F +I
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-NLESLSDISESNRYNFEHADICD 61
Query: 80 DSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE-------- 129
+ + + + D ++LAA T P I +N + +++ +
Sbjct: 62 SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121
Query: 130 --NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYAC 187
NN R H ST EVYG ++ L + + Y+
Sbjct: 122 KKNNFRFHHISTDEVYGD------LPHPDEVENSVTLPLFTETTAY------APSSPYSA 169
Query: 188 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
+K + L+ A GL + N GP +++ N L
Sbjct: 170 SKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF-----------PEKLIPLVILNALEG 218
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+PL + G R ++Y++D A+ +++ G +N+G HNE + + +
Sbjct: 219 KPLPIYGKGDQIRDWLYVEDHARALHMVVTEG--KAGETYNIGG-HNEKKNLDVVFTICD 275
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ ++ +A + + + + D I+++LGW P + + T
Sbjct: 276 LLDEIVPKATSYREQI-----TYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKT 330
Query: 368 LTY--QHRTYAEAIK 380
+ + + + +K
Sbjct: 331 VEWYLANTQWVNNVK 345
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 143 bits (360), Expect = 3e-40
Identities = 72/368 (19%), Positives = 131/368 (35%), Gaps = 55/368 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GFIGSH ++L + A +V + R++F
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRL 134
+I+ L ++ D ++ AA +N +++ + R+
Sbjct: 63 DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+H ST +VYG + SPL +P YA +K +
Sbjct: 123 VHVSTNQVYGSIDSGSWTESSPL--EP--------------------NSPYAASKAGSDL 160
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+ A GL+ I R N GP +++ F NLL L L
Sbjct: 161 VARAYHRTYGLDVRITRCCNNYGPYQHP-----------EKLIPLFVTNLLDGGTLPLYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G + R +++ D + L++ G I+++G E+T R+L ++ +
Sbjct: 210 DGANVREWVHTDDHCRGIALVLAGG--RAGEIYHIGG-GLELTNRELTGILLDSLGA--- 263
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY--QH 372
D SS + + D I ++LG+ P+ S D L T+ + ++
Sbjct: 264 ---------DWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314
Query: 373 RTYAEAIK 380
R + E +K
Sbjct: 315 RGWWEPLK 322
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 133 bits (336), Expect = 2e-36
Identities = 68/379 (17%), Positives = 121/379 (31%), Gaps = 70/379 (18%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYND-----KIKHLLEPESQTGADRIQFHRLNIK 78
G G GS+L E LLE +++ + ++ H+ + + T + H ++
Sbjct: 8 GVTGQDGSYLAEF-LLEKGYEVHGIKRRASSFNTERVDHIYQ-DPHTCNPKFHLHYGDLS 65
Query: 79 HDSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----K 132
S L +++ D NL A+ A P T + + L +++
Sbjct: 66 DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKT 125
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
R ST E+YG KE R YA AK
Sbjct: 126 RFYQASTSELYG---------------LVQEIPQKETTPF-------YPRSPYAVAKLYA 163
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+ G+ FN PR V R + N+ + L
Sbjct: 164 YWITVNYRESYGMYACNGILFNHESPRRGE--------TFVTRKITRAIANIAQGLESCL 215
Query: 253 VDG-GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV--- 308
G S R + + KD ++ +M++ F + + +VRQ EM
Sbjct: 216 YLGNMDSLRDWGHAKDYVKMQWMMLQQE---QPEDFVIATG-VQYSVRQFVEMAAAQLGI 271
Query: 309 --------------YAKVSGEAALEEPTVDVS---SKEFYGEGYDDSDKRIPDMTIINQQ 351
V+G A DV ++ + + + D T +++
Sbjct: 272 KLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPA--EVETLLGDPTKAHEK 329
Query: 352 LGWNPKTSLWDLLESTLTY 370
LGW P+ +L +++ +
Sbjct: 330 LGWKPEITLREMVSEMVAN 348
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 124 bits (312), Expect = 4e-33
Identities = 62/362 (17%), Positives = 130/362 (35%), Gaps = 44/362 (12%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADR 69
P +P + G GFIGS+L E LL+ K++ LD + + + S+
Sbjct: 13 PAQPKVWLITGVAGFIGSNLLET-LLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
+F + +I++ D ++ AA+ + P+ + +N L ++ +
Sbjct: 72 FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131
Query: 130 -NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
+ + ++ YG G +D+ K YA
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIG----------------------KPLSPYAVT 169
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
K + E G +R FN G R D P+ V+ +++++++
Sbjct: 170 KYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD-------PNGAYAAVIPKWTSSMIQGD 222
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+ + G++ R F YI++ ++A LL A ++N+ ++ QL + +
Sbjct: 223 DVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAV-GGRTSLNQLFFALRDG 281
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
A+ E + D + D++ + LG+ PK + + +
Sbjct: 282 LAENGVSYHRE--------PVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAM 333
Query: 369 TY 370
+
Sbjct: 334 PW 335
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 121 bits (304), Expect = 5e-32
Identities = 65/368 (17%), Positives = 129/368 (35%), Gaps = 40/368 (10%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GFIGS+ + + + DR++ +I
Sbjct: 4 NIIVTGGAGFIGSNFVHY-VYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++ L AD ++ AA + P I++NFI +++ + + R H S
Sbjct: 63 DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 122
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG L +D P + + + Y+ K + ++ A
Sbjct: 123 TDEVYGDLP---LREDLPGHGEGPGEKFTAE-------TNYNPSSPYSSTKAASDLIVKA 172
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G++ TI N GP + + + N+L KL G++
Sbjct: 173 WVRSFGVKATISNCSNNYGPYQH-----------IEKFIPRQITNILAGIKPKLYGEGKN 221
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R +I+ D V ++ ++ N +++ E++ E +
Sbjct: 222 VRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKN---NKEVLELILEKMGQ------- 271
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK-TSLWDLLESTLTY--QHRTY 375
+ + + + D + + +LGW P+ T + LE T+ + ++ +
Sbjct: 272 -----PKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDW 326
Query: 376 AEAIKQAV 383
+A K+AV
Sbjct: 327 WKAEKEAV 334
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 116 bits (290), Expect = 4e-30
Identities = 65/367 (17%), Positives = 129/367 (35%), Gaps = 51/367 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G G+IGSH C + LL+ H ++ LD + + +L + G F +I++
Sbjct: 3 VLVTGGSGYIGSHTCVQ-LLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61
Query: 80 DSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
++ + ++ D I+ A + + +PL+ +N L ++ N K I
Sbjct: 62 EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ VYG + Y +K ++E+++
Sbjct: 122 SSSATVYGDQPKIP---------------------YVESFPTGTPQSPYGKSKLMVEQIL 160
Query: 197 YAEG-AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL--ACFSNNLLRRQPLKLV 253
A+ ++R FN +G G D +G+P L + RR L +
Sbjct: 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGED--PQGIPNNLMPYIAQVAVGRRDSLAIF 218
Query: 254 DGGQSQRTFIYIKDAIEAVLL-------MIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
++D I + L M + + HI+N+G +V + +
Sbjct: 219 GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFS 277
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ K + F D D + +++L W +L ++ +
Sbjct: 278 KACGKPV-------------NYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQD 324
Query: 367 TLTYQHR 373
T +Q R
Sbjct: 325 TWHWQSR 331
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 116 bits (291), Expect = 5e-30
Identities = 68/359 (18%), Positives = 128/359 (35%), Gaps = 49/359 (13%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
P + + I + GAGGFI SH+ + L H ++A D K +H+ E +FH
Sbjct: 12 PSENLKISITGAGGFIASHIARR-LKHEGHYVIASD--WKKNEHMTE-----DMFCDEFH 63
Query: 74 RLNIKHDSRLEGLIKMAD-LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN- 131
++++ + + D + A + + +Y+N + + +++ N
Sbjct: 64 LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGI 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR + S+ +Y + K A P + ++ K
Sbjct: 124 KRFFYASSACIYPE------FKQLETTNVSLKESDAWPAEP---------QDAFGLEKLA 168
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + G+E I R N GP + G + A +
Sbjct: 169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE------KAPAAFCRKAQTSTDRFE 222
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F +I + +E VL + ++ N+G+ V++ ++AEM+ K
Sbjct: 223 MWGDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD-EMVSMNEMAEMVLSFEEK 278
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ G + R D +I ++LGW P L + L T +
Sbjct: 279 --------------KLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 323
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 7e-30
Identities = 59/362 (16%), Positives = 115/362 (31%), Gaps = 45/362 (12%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYND-----KIKHLLEPESQTGADRIQFHRLNIK 78
G G GS+L E LLE +++ + + +I+HL + ++ H ++
Sbjct: 8 GITGQDGSYLAEF-LLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLT 66
Query: 79 HDSRLEGLIKMADLT--INLAAICTPADYNTRPLDTIYSNFIDALPVV----KYCSENNK 132
+ L +I T NL A T + + L ++ N+
Sbjct: 67 DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSV 126
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
+ ST E+YGK + +P R Y AK
Sbjct: 127 KFYQASTSELYGKVQEIPQKETTPFYP----------------------RSPYGAAKLYA 164
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
++ L FN PR G + ++ + L +
Sbjct: 165 YWIVVNFREAYNLFAVNGILFNHESPRR-------GANFVTRKISRSVAKIYLGQLECFS 217
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG----NPHNEVTVRQLAEMMTEV 308
+ ++R + + KD +EA+ LM++N + I E + + + +
Sbjct: 218 LGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWE 277
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+ +E + + + D D T Q+L W P+ + +L+ +
Sbjct: 278 GKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMV 337
Query: 369 TY 370
Sbjct: 338 HA 339
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 110 bits (275), Expect = 4e-28
Identities = 67/361 (18%), Positives = 122/361 (33%), Gaps = 65/361 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G G +GS + + L + L L ++ LN+
Sbjct: 5 VFIAGHRGMVGSAIRRQ-LEQRGDVELVLRTRDE---------------------LNLLD 42
Query: 80 DSRLEGLIKM--ADLTINLA-AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
+ D A + NT P D IY N + ++ +N+ +L+
Sbjct: 43 SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLL 102
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
+ +Y A + E + G++E YA AK +L
Sbjct: 103 FLGSSCIYP---------------KLAKQPMAES--ELLQGTLEPTNEPYAIAKIAGIKL 145
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + G ++ V P N GP +F P + R + + + +
Sbjct: 146 CESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQ--KAPDVVVWGS 203
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPH------NEVTVRQLAEMMTEVY 309
G R F+++ D A + ++E H + T+R+LA+ +
Sbjct: 204 GTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTI---- 259
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
AKV G F D + +++ D+T ++ QLGW + SL L ST
Sbjct: 260 AKVVGYKGR---------VVFDASKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQ 309
Query: 370 Y 370
+
Sbjct: 310 W 310
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 109 bits (271), Expect = 3e-27
Identities = 62/390 (15%), Positives = 126/390 (32%), Gaps = 50/390 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD------VYNDKIKHLLEPESQTGADRIQFH 73
+ + G G+IGSH +L +T H ++ +D +D ++ +
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++ + G ++ D + P D + +KY N
Sbjct: 65 PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHM-CAFLAVGESVRDPLKYYDNNVVG 123
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ + K + + +P + +A P + + Y +K + E
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGI--DGPSEGVPRVLACFSNNLLRRQPLK 251
R+I G++ +R FN G D G G + +P +L +++ Q L
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLT 243
Query: 252 LV-------------------DGGQSQRTFIYIKDAIEAVLLMIEN-------PARANGH 285
+ DG R ++++ D A +L ++
Sbjct: 244 IHEDASTDKRMPIFGTDYPTPDGTCV-RDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302
Query: 286 IFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 345
+FN+G +VR++ E+ + P + +E D +
Sbjct: 303 VFNLGTS-RGYSVREVIEVARKTTGH-------PIPVRECGRRE------GDPAYLVAAS 348
Query: 346 TIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+ LGW PK + + T RT+
Sbjct: 349 DKAREVLGWKPKYDTLEAIMETSWKFQRTH 378
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 103 bits (258), Expect = 1e-25
Identities = 64/371 (17%), Positives = 121/371 (32%), Gaps = 53/371 (14%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ + G G+IGSH + L+E + + D ++ + I F+ +++
Sbjct: 3 IVLVTGGAGYIGSHTVVE-LIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61
Query: 79 HDSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
LE + K D I+ A + + PL ++N + + +++ + N + +
Sbjct: 62 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
S+ VYG + P P+ ++ Y K IE +
Sbjct: 122 FSSSATVYGD--ATRFPNMIPIPEECPL----------------GPTNPYGHTKYAIENI 163
Query: 196 I--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL--ACFSNNLLRRQPLK 251
+ + +F I+R FN IG + G D G+P L + RR+ L
Sbjct: 164 LNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGED--PLGIPNNLLPYMAQVAVGRREKLY 221
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENP-----------ARANGHIFNVGNPHNEVTVRQ 300
+ R I+D I V L + +N+G+ TV +
Sbjct: 222 IFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFE 280
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+ K SG + G D ++L W + +
Sbjct: 281 VYHAF----CKASGIDL---------PYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQV 327
Query: 361 WDLLESTLTYQ 371
D + +
Sbjct: 328 EDSCKDLWKWT 338
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 102 bits (255), Expect = 3e-25
Identities = 54/357 (15%), Positives = 116/357 (32%), Gaps = 29/357 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GS+L L ++ D + K + +F +I++
Sbjct: 3 LLITGGCGFLGSNLASF-ALSQGIDLIVFDNLSRK-GATDNLHWLSSLGNFEFVHGDIRN 60
Query: 80 DSRLEGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVK--YCSENNKRLI 135
+ + LI D +LA P N L +++ +N +I
Sbjct: 61 KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
+ ST +VYG + + Y + + + Y C+K ++
Sbjct: 121 YSSTNKVYGD------LEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQY 174
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ GL + R + G R + +P +
Sbjct: 175 MLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQK---AVEIKNGINKPFTISGN 231
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G+ R ++ +D I + N ++ G G N +++ +L +++ +
Sbjct: 232 GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI--- 288
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ ++ +E D + D+ I + W+PK S D ++ +
Sbjct: 289 ----DMRFTNLPVRE------SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWT 335
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 100 bits (247), Expect = 3e-24
Identities = 119/360 (33%), Positives = 183/360 (50%), Gaps = 28/360 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG+HL E++L E +++ LD+ +D I L F +I
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN------HPHFHFVEGDISI 56
Query: 80 DSRL-EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
S E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 57 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVY + ED S I G + K RW Y+ +KQL++R+I+A
Sbjct: 117 TSEVY---------------GMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWA 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D + G R + NL+ P+KL+DGG+
Sbjct: 162 YGEKEGLQFTLFRPFNWMGPRLDNLNAARI---GSSRAITQLILNLVEGSPIKLIDGGKQ 218
Query: 259 QRTFIYIKDAIEAVLLMIE-NPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IE R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH 278
Query: 318 LEEPTVD--VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
V S +YG+GY D + R P + ++ L W PK + + ++ TL + RT
Sbjct: 279 FPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV 338
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 97.4 bits (241), Expect = 2e-23
Identities = 56/359 (15%), Positives = 115/359 (32%), Gaps = 58/359 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN-----DKIKHLLEPESQTGADRIQFH 73
+ + G G G++L + LLE +++ L +++ L IQ+
Sbjct: 2 SALVTGITGQDGAYLAKL-LLEKGYRVHGLVARRSSDTRWRLRELGIE------GDIQYE 54
Query: 74 RLNIKHDSRL--EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
++ + + NLAA +P+ T + + +++ + +
Sbjct: 55 DGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS 114
Query: 132 --KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
R ST E++G +++P R Y AK
Sbjct: 115 PETRFYQASTSEMFGLIQAERQDENTPF----------------------YPRSPYGVAK 152
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ GL + FN P G +V + L +Q
Sbjct: 153 LYGHWITVNYRESFGLHASSGILFNHESPLR-------GIEFVTRKVTDAVARIKLGKQQ 205
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ ++R + + D +EA+ LM++ + V M ++
Sbjct: 206 ELRLGNVDAKRDWGFAGDYVEAMWLMLQQD---KADDYVVATGVTTTV-----RDMCQIA 257
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+ G + +D F+ + D + + + LGW P+TSL +L+ +
Sbjct: 258 FEHVGLDYRDFLKID---PAFFRPA--EVDVLLGNPAKAQRVLGWKPRTSLDELIRMMV 311
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.9 bits (237), Expect = 1e-22
Identities = 62/370 (16%), Positives = 126/370 (34%), Gaps = 55/370 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND------KIKHLLEPESQTGADRIQFH 73
+ + G G+IGSH + LLE + + +D +++ + L + ++F
Sbjct: 5 VLVTGGAGYIGSHTVLE-LLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 74 RLNI--KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
++I + + I+ A + + +PLD N + +++ +
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
+ + FS+ Y + Y +K
Sbjct: 124 VKNLVFSSS--------------------ATVYGNPQYLPLDEAHPTGGCTNPYGKSKFF 163
Query: 192 IERLIYA-EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA--CFSNNLLRRQ 248
IE +I A+ ++R FN G G D +G+P L + RR+
Sbjct: 164 IEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGED--PQGIPNNLMPYVSQVAIGRRE 221
Query: 249 PLKL------VDGGQSQRTFIYIKDAIEAVLLMIENPARANGH-IFNVGNPHNEVTVRQL 301
L + + G R +I++ D + + + G I+N+G +V Q+
Sbjct: 222 ALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQM 280
Query: 302 AEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ M + K + P V+ +E D + ++ ++LGW L
Sbjct: 281 VQAMEKASGK-------KIPYKVVARRE------GDVAACYANPSLAQEELGWTAALGLD 327
Query: 362 DLLESTLTYQ 371
+ E +Q
Sbjct: 328 RMCEDLWRWQ 337
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 95.1 bits (235), Expect = 1e-22
Identities = 56/365 (15%), Positives = 100/365 (27%), Gaps = 57/365 (15%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND-----KIKHLLEPESQTGADRIQFH 73
+ G G GS+L E LL +++ L + +I H+ ++ H
Sbjct: 3 IALITGITGQDGSYLTEF-LLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61
Query: 74 RLNIKHDSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFI-----DALPVVKY 126
++ S L I + D NLAA A P T
Sbjct: 62 YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
+ + + + +P R YA
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSETTPF----------------------HPRSPYA 159
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
+K GL FN PR V R + +
Sbjct: 160 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRR--------GENFVTRKITRALGRIKV 211
Query: 247 RQPLKLVDG-GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMM 305
KL G Q+ R + + D +EA+ LM++ + + E + +
Sbjct: 212 GLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYL 271
Query: 306 TEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+ + V++ + F + D D + + LGW P+ L++
Sbjct: 272 GLNW----------KDYVEIDQRYFR---PAEVDNLQGDASKAKEVLGWKPQVGFEKLVK 318
Query: 366 STLTY 370
+
Sbjct: 319 MMVDE 323
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 79.1 bits (193), Expect = 5e-17
Identities = 50/353 (14%), Positives = 106/353 (30%), Gaps = 31/353 (8%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGADRIQFHRLNI 77
+ + GA GF+ SH+ E+ LLE +K+ K+ +L + +++ ++
Sbjct: 13 LVLVTGANGFVASHVVEQ-LLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ +IK A ++A++ + ++ + ++ + + KR +
Sbjct: 72 LKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLN-ALRAAAATPSVKRFVLT 130
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
S+ I + L + + A +K W YA +K E +
Sbjct: 131 SSTVSAL--IPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188
Query: 198 AEGAENGL--EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
EN V P IG D L +
Sbjct: 189 KFMDENKPHFTLNAVLPNYTIGTIFDPET---------QSGSTSGWMMSLFNGEVSPALA 239
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ ++ D L + P ++ + ++Y
Sbjct: 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGT---FDWNTVLATFRKLY------ 290
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P+ +F +G D S I + LG S+ + ++ +
Sbjct: 291 -----PSKTF-PADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLV 337
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 72.2 bits (175), Expect = 4e-15
Identities = 33/295 (11%), Positives = 71/295 (24%), Gaps = 50/295 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T+ + GA G G + +K L E K +A + +I
Sbjct: 5 TVLVTGASGRTGQIVYKK-LKEGSDKFVAKGLVRSAQGKEKIG------GEADVFIGDIT 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ + D + L + P FI + +
Sbjct: 58 DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+V G + D + +R
Sbjct: 118 AAKVAGVKHIVVVGSMGGTNPDHPLN------------------KLGNGNILVWKRKAEQ 159
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
A++G +TI+R + + G + + Q+
Sbjct: 160 YLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELL----------------------QT 197
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPH--NEVTVRQLAEMMTEVYAK 311
+ D E + + A F++G+ + + ++V ++
Sbjct: 198 DTKTVPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 251
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 67.6 bits (163), Expect = 4e-13
Identities = 51/349 (14%), Positives = 93/349 (26%), Gaps = 30/349 (8%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ + G GF G L L + + + L E AD +Q +I+
Sbjct: 10 RVFVTGHTGFKGGWLSLW-LQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIR 66
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++L I+ I P S L
Sbjct: 67 DQNKLLESIREFQPEIVFHMAAQP--------LVRLSYSEPVETYSTNVMGTVYLLEAIR 118
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ K ++ Y E S K + A
Sbjct: 119 HVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPA 178
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
++G VR N IG + R++ + QP+ ++ +
Sbjct: 179 NYGQHGTAVATVRAGNVIGGGDW----------ALDRIVPDILRAFEQSQPV-IIRNPHA 227
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R + ++ + + LL+ + N + + E K GE A
Sbjct: 228 IRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGAS 287
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ + ++ D + QLGW+P+ +L LE
Sbjct: 288 WQLDGNAHP--------HEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYI 328
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 66.9 bits (161), Expect = 9e-13
Identities = 46/388 (11%), Positives = 100/388 (25%), Gaps = 32/388 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD----------------VYNDKIKHLLEPES 63
+ +IG G+ G L + +++ +D I +
Sbjct: 4 VMVIGGDGYCGWATALH-LSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMAD----LTINLAAICTPADYNTRPLDTIYSNFID 119
I+ + +I L K + + + + N +
Sbjct: 63 ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 122
Query: 120 ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
V + + H G+ + + P S
Sbjct: 123 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 182
Query: 180 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
+ + A + + + + + L
Sbjct: 183 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNR 242
Query: 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299
F PL + G R ++ I+D ++ V + I NPA+A + +V
Sbjct: 243 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVN 301
Query: 300 QLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTS 359
+LA ++T+ +K+ + + T + +LG P
Sbjct: 302 ELASLVTKAGSKLGLDVKKMTVPNP--------RVEAEEHYYNAKHTKL-MELGLEPHYL 352
Query: 360 LWDLLESTLTYQHRTYAEAIKQAVAKPV 387
LL+S L + + + + P
Sbjct: 353 SDSLLDSLLNF-AVQFKDRVDTKQIMPS 379
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 59.8 bits (143), Expect = 1e-10
Identities = 38/371 (10%), Positives = 106/371 (28%), Gaps = 71/371 (19%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIK 78
+ ++G G+IG + + H L ++ + ++
Sbjct: 6 VLIVGGTGYIGKRIVNA-SISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 64
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
RL +K D+ I+ A + + L + + N + S
Sbjct: 65 DHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA----------IKEAGNIKRFLPS 114
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ I + + +R +
Sbjct: 115 --------------------------------EFGMDPDIMEHALQPGSITFIDKRKVRR 142
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ +T V + G + + + + R + + G
Sbjct: 143 AIEAASIPYTYVSSNMFAGYFAGSLAQL-------------DGHMMPPRDKVLIYGDGNV 189
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
+ ++ D + I++P N ++ + ++ +++ ++ ++S +
Sbjct: 190 KGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI-LSQKEVIQIW----ERLSEQNL- 243
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW---DLLESTLTY---QH 372
+ +SS++F + D S + + Q + + +E+T Y ++
Sbjct: 244 --DKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKY 301
Query: 373 RTYAEAIKQAV 383
T +++ V
Sbjct: 302 VTMDSYLERYV 312
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 53.6 bits (127), Expect = 1e-08
Identities = 33/292 (11%), Positives = 79/292 (27%), Gaps = 61/292 (20%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I +IGA G+IG H+ + L+ H L + ++ + L
Sbjct: 6 ILLIGATGYIGRHVAKA-SLDLGHPTFLLVRESTAS-----------SNSEKAQLLESFK 53
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S I + + + + + + + ++K E F
Sbjct: 54 ASGAN--IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP- 110
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
S A + ++ +
Sbjct: 111 -------------------------------SEFGNDVDNVHAVEPAKSVFEVKAKVRRA 139
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
G+ +T V + G + + R + ++ G ++
Sbjct: 140 IEAEGIPYTYVSSNCFAGYFLRSLA--------------QAGLTAPPRDKVVILGDGNAR 185
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
F+ +D + +++P N ++ P N +++ +L + + K
Sbjct: 186 VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRL-PANTLSLNELVALWEKKIDK 236
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 52.3 bits (123), Expect = 3e-08
Identities = 49/351 (13%), Positives = 93/351 (26%), Gaps = 47/351 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGS++ + + + IL +D G + LNI
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK------------DGTKFVNLVDLNIAD 49
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ D I + A D + S+ + +
Sbjct: 50 ------YMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHY 103
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
C + L A + EK Y +K L + +
Sbjct: 104 CLER---------EIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQI 154
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
E + R FN GPR + + + L + L +
Sbjct: 155 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLF------EGSENFK 208
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F+Y+ D + L +EN ++ + +A+ + +E
Sbjct: 209 RDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESF----QAVADAT----LAYHKKGQIE 260
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
K D+T + P ++ + + + +
Sbjct: 261 YIPFPDKLKG------RYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAW 305
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 41.9 bits (97), Expect = 8e-05
Identities = 33/294 (11%), Positives = 68/294 (23%), Gaps = 63/294 (21%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
TI ++GA G G+ L H + A + E + + +
Sbjct: 5 TIAVVGATGRQGASLIRV-AAAVGHHVRAQVHSLKGLI----AEELQAIPNVTLFQGPLL 59
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++ L+ +LA I T + DA + +S
Sbjct: 60 NN---VPLMDTLFEGAHLAFINTTSQAGDEIAIGKD--LADA-----AKRAGTIQHYIYS 109
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ + + + +Y
Sbjct: 110 SMPDHSLYGPWP---------------------AVPMWAPKFTVENYVRQLG-------- 140
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
L T V G + + P + + D
Sbjct: 141 ------LPSTFVYA----GIYNNNFTSLPYPLFQMELMPDGTFEWHA------PFDPDIP 184
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
D A+L + ++ P + NGH + ++ Q+ + +
Sbjct: 185 LPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET--LSPVQVCAAFSRALNR 236
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.4 bits (93), Expect = 1e-04
Identities = 28/272 (10%), Positives = 68/272 (25%), Gaps = 74/272 (27%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + GA G G + ++ +++ L + ++ G ++
Sbjct: 5 KIAIFGATGQTGLTTLAQ-AVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVL 56
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ ++ + D I L T + N + A + +++ +
Sbjct: 57 QAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSE-GARNIVAA-----MKAHGVDKVVACT 110
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
+ + + + + + +++
Sbjct: 111 SAFLLWDP-----------------------------TKVPPRLQAVTDDHIRMHKVL-- 139
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
E+GL++ V P + D P G V G+
Sbjct: 140 --RESGLKYVAVMPPHI----------GDQPLTGAYTVTL----------------DGRG 171
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
I D +L + +GH
Sbjct: 172 PSRVISKHDLGHFMLRCLTTD-EYDGHSTYPS 202
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 38.7 bits (88), Expect = 9e-04
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI 55
I + GA G +G + ++ L +++ DV + I
Sbjct: 4 ILITGANGQLGREIQKQ-LKGKNVEVIPTDVQDLDI 38
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 100.0 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.97 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.96 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.96 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.96 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.94 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.93 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.91 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.82 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.81 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.81 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.81 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.8 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.8 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.8 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.8 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.8 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.8 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.79 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.79 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.79 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.79 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.78 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.78 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.78 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.77 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.77 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.77 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.77 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.77 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.77 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.77 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.76 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.76 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.76 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.76 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.76 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.75 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.74 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.74 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.74 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.74 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.74 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.74 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.73 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.73 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.72 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.72 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.72 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.71 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.7 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.69 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.69 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.67 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.67 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.66 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.65 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.65 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.64 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.63 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.61 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.59 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.59 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.58 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.56 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.55 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.53 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.52 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.49 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.45 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.41 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.38 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.24 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.21 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.19 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.57 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.3 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.27 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.19 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.16 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.15 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.15 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.11 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 98.05 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.0 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.92 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.81 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.81 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.79 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.78 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.76 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.75 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.74 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.72 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.72 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.67 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.66 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.63 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.62 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.61 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.61 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.58 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.57 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.57 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.56 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.55 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.55 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.53 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.47 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.47 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.46 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.42 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.41 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.39 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.37 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.35 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.34 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.34 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.29 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.2 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 97.2 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.19 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.17 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.16 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.15 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.13 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.13 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.11 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.11 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.07 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.03 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.02 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.01 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.98 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.95 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.92 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.92 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.91 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.81 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.79 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.74 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.72 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.65 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.64 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.56 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.51 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.37 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.34 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.33 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.31 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.26 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.26 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.19 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.07 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.03 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.95 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.94 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.94 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.9 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.89 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.89 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.87 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 95.83 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.78 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.78 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 95.76 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.74 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.72 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.67 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 95.58 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.34 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.3 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 95.3 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.29 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.21 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.08 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.06 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.0 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.99 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.98 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.93 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.9 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.74 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.71 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 94.66 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.62 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.61 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 94.6 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.57 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.52 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 94.49 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.42 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.39 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.35 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.32 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.25 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.2 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 94.16 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 94.15 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.12 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.12 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.04 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 94.03 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 93.99 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 93.93 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.8 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.79 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 93.71 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.67 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.56 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 93.49 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 93.43 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.43 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 93.19 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 93.13 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 92.89 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 92.82 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 92.77 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 92.56 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.32 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 92.25 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 92.16 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.9 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 91.79 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 91.74 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 91.62 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 91.58 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 91.55 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 91.49 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.4 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 91.31 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 91.17 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 90.91 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 90.89 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 90.84 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 90.8 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 90.78 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 90.7 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 90.56 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 90.54 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 90.53 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 90.26 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 90.04 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 89.86 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.69 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 89.58 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 89.5 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 89.07 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 88.68 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 88.44 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 88.32 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 88.23 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 87.7 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 87.13 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 87.05 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.04 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 86.81 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 86.67 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 86.55 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 86.35 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 86.11 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 86.01 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 85.93 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 85.83 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 85.17 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.57 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 84.36 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 84.26 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 83.84 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 83.13 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 82.63 | |
| d2vjma1 | 427 | Formyl-CoA transferase {Oxalobacter formigenes [Ta | 82.44 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 82.17 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 82.08 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 81.95 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 81.78 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 81.51 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 81.35 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 81.01 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 80.9 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 80.87 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 80.55 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 80.52 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 80.41 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-52 Score=384.58 Aligned_cols=307 Identities=27% Similarity=0.445 Sum_probs=251.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|||||||||||||++|+++|+++ |++|+++++..+... .+... .....+++...|+ ++.++.++|+|||+
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~---~~~~~~d~~~~~~-----~~~~~~~~d~Vihl 72 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDV-----VEPLYIEVDQIYHL 72 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCT-----TSCCCCCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCCcCCHHHHHHh---cCCCceEEEehHH-----HHHHHcCCCEEEEC
Confidence 78999999999999999999999 999999987443222 11111 0123445555554 44456689999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
|+..++..+..++...+++|+.++.+|+++|++.++|+||+||.+|||.....+.+|+......
T Consensus 73 Aa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~---------------- 136 (312)
T d2b69a1 73 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVN---------------- 136 (312)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCC----------------
T ss_pred cccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCC----------------
Confidence 9988766667788999999999999999999999989999999999998776666665432211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
+..|.+.|+.+|.++|.+++.+++.++++++++||+++|||+... ....+++.++.++..++++.+++++
T Consensus 137 -~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~---------~~~~~i~~~i~~~~~g~~i~i~~~g 206 (312)
T d2b69a1 137 -PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM---------NDGRVVSNFILQALQGEPLTVYGSG 206 (312)
T ss_dssp -SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCT---------TCCCHHHHHHHHHHHTCCEEEESSS
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCC---------CCccHHHHHHHHHHcCCCeEEeCCC
Confidence 124778999999999999999999999999999999999998752 1235788999999999999999999
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD 336 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
.+.++|+|++|+|+++..+++.. .++.||++++ +.+++.++++++++.++........+. ...
T Consensus 207 ~~~r~~i~v~D~~~~~~~~~~~~---~~~~~n~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~~ 269 (312)
T d2b69a1 207 SQTRAFQYVSDLVNGLVALMNSN---VSSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLSE-------------AQD 269 (312)
T ss_dssp CCEEECEEHHHHHHHHHHHHTSS---CCSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEECC-------------CTT
T ss_pred CeeEccEEHHHHHHHHHHHHhhc---cCCceEecCC-cccchhhHHHHHHHHhCCCCceEECCC-------------CCC
Confidence 99999999999999999998775 4679999997 899999999999999997654433221 223
Q ss_pred CCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 337 DSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 337 ~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
+.....+|++|+++.|||+|+++++++|+++++||+++++
T Consensus 270 ~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~~ 309 (312)
T d2b69a1 270 DPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 309 (312)
T ss_dssp CCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 4456678999999999999999999999999999998876
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=3e-51 Score=383.66 Aligned_cols=326 Identities=19% Similarity=0.282 Sum_probs=258.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vi 94 (390)
|||||||||||||++|+++|+++ |++ |+++++.... ............++++++++|++|...+..++++ +|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~-g~~vv~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKN-TQDTVVNIDKLTYA-GNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH-CSCEEEEEECCCTT-CCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCCEEEEEeCCCcc-ccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 68999999999999999999999 887 5555553322 1111111111246899999999999999999885 89999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC----------CcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----------KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----------~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
||||..++..+..+|...+++|+.++.+++++|++.+ ++|||+||..|||.....+..|+....+
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~----- 153 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLP----- 153 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCC-----
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCC-----
Confidence 9999887666677889999999999999999998764 4899999999999876554444332211
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (390)
..++ .....|.+.|+.+|.++|.++..+.++++++++++||+.+|||+.. ...+++.++.++
T Consensus 154 -~~~e------~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~-----------~~~~i~~~i~~~ 215 (361)
T d1kewa_ 154 -LFTE------TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF-----------PEKLIPLVILNA 215 (361)
T ss_dssp -CBCT------TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC-----------TTSHHHHHHHHH
T ss_pred -Cccc------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC-----------cCcHHHHHHHHH
Confidence 0111 1223588899999999999999999999999999999999999764 135788899999
Q ss_pred hcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc
Q 016370 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324 (390)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~ 324 (390)
..++++.++|+|++.|+|+|++|+|+++..++++.. .+++|||+++ +.+++.|+++.+.+.++............
T Consensus 216 ~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~--~~~~~Ni~s~-~~~s~~~~~~~i~~~~~~~~~~~~~~~~~-- 290 (361)
T d1kewa_ 216 LEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK--AGETYNIGGH-NEKKNLDVVFTICDLLDEIVPKATSYREQ-- 290 (361)
T ss_dssp HHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCC-CEEEHHHHHHHHHHHHHHHSCCSSCGGGG--
T ss_pred HcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC--CCCeEEECCC-CCcchHHHHhHhhhhcccccccccCcccc--
Confidence 999999999999999999999999999999999864 5789999997 79999999999999888655433221111
Q ss_pred CCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 325 VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.............+.+|++|++++|||+|+++++|+|+++++||+++++
T Consensus 291 ---~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n~~ 339 (361)
T d1kewa_ 291 ---ITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQ 339 (361)
T ss_dssp ---EEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred ---eeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence 1112222344556789999999999999999999999999999988744
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.5e-51 Score=380.17 Aligned_cols=307 Identities=21% Similarity=0.301 Sum_probs=259.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeE------EEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKI------LALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V------~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
|||||||||||||++|++.|+++ |++| +++++.... ...+.. .....+++++.+|+.+..........
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~-g~~v~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~ 76 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAG-AYPDVPADEVIVLDSLTYAGNRANLAP---VDADPRLRFVHGDIRDAGLLARELRG 76 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-SCTTSCCSEEEEEECCCTTCCGGGGGG---GTTCTTEEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCCccCCceEEEEeCCCccccHhHhhh---hhcCCCeEEEEeccccchhhhccccc
Confidence 78999999999999999999998 7754 444433211 111111 11246899999999999999999889
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
+|+|+|+|+.........++...++.|+.++.+++++|++.+ ++|||+||.++||.....+++|++|..
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~---------- 146 (322)
T d1r6da_ 77 VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLE---------- 146 (322)
T ss_dssp CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCC----------
T ss_pred cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCC----------
Confidence 999999999887666667788899999999999999999999 999999999999998888888888764
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
|.+.|+.+|..+|.+++.++++++++++++||+++|||+.. ...+++.++.++..++
T Consensus 147 ------------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~-----------~~~~i~~~i~~~~~~~ 203 (322)
T d1r6da_ 147 ------------PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQH-----------PEKLIPLFVTNLLDGG 203 (322)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC-----------TTSHHHHHHHHHHTTC
T ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCC-----------cCcHHHHHHHHHHcCC
Confidence 66789999999999999999999999999999999999765 1257889999999999
Q ss_pred CeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcc
Q 016370 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK 328 (390)
Q Consensus 249 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~ 328 (390)
++.++++|++.++|+|++|+|+++..+++++. .+++||++++ +.+++.++++.+.+.+|.+.......
T Consensus 204 ~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~--------- 271 (322)
T d1r6da_ 204 TLPLYGDGANVREWVHTDDHCRGIALVLAGGR--AGEIYHIGGG-LELTNRELTGILLDSLGADWSSVRKV--------- 271 (322)
T ss_dssp CEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCC-CEEEHHHHHHHHHHHHTCCGGGEEEE---------
T ss_pred CcEEecCCCeEEccEEHHHHHHHHHHHHhCCC--CCCeeEEeec-ccchhHHHHHHHHHHhCCCccceeec---------
Confidence 99999999999999999999999999999875 5789999997 89999999999999999764332211
Q ss_pred cccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 329 EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
...........+|++|+++.|||+|+++++|+|+++++||++|.+
T Consensus 272 ---~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n~~ 316 (322)
T d1r6da_ 272 ---ADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRG 316 (322)
T ss_dssp ---CCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred ---CCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence 111233445679999999999999999999999999999998764
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.6e-51 Score=380.99 Aligned_cols=323 Identities=18% Similarity=0.166 Sum_probs=249.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh--hccccc--cccCCCCCeeEEeCCCCChhHHHHhhcc--cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI--KHLLEP--ESQTGADRIQFHRLNIKHDSRLEGLIKM--AD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~~~~~~--~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d 91 (390)
|+|||||||||||++|+++|+++ |++|++++|..+.. ..+... ......++++++++|++|.+++.+++++ +|
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence 68999999999999999999999 99999999965421 111100 0111246899999999999999999986 69
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC----CcEEEeecccccccccCCCCCCCCCCCCCccccccc
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~ 167 (390)
+|||+|+..+...+..++...+++|+.||.+|+++|++.+ +||||+||++|||.....+++|+++..
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~--------- 151 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFY--------- 151 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCC---------
T ss_pred EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCC---------
Confidence 9999999988777888999999999999999999999876 369999999999987777788877663
Q ss_pred cCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcC
Q 016370 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247 (390)
Q Consensus 168 e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
|.++|+.+|+++|.+++.++++++++++++||+++|||+.+. ......+..++.++..+
T Consensus 152 -------------P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~--------~~~~~~i~~~~~~~~~~ 210 (357)
T d1db3a_ 152 -------------PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE--------TFVTRKITRAIANIAQG 210 (357)
T ss_dssp -------------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHTT
T ss_pred -------------CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCc--------CCCchHHHHHHHHHHhC
Confidence 677899999999999999999999999999999999997541 22344555566666555
Q ss_pred CC-eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 248 QP-LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 248 ~~-~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
++ ....|++++.++|+|++|+|+++..++++. .++.||++++ +.+|+.|+++++.+.+|........+.......
T Consensus 211 ~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~---~~~~yni~sg-~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 286 (357)
T d1db3a_ 211 LESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE---QPEDFVIATG-VQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIV 286 (357)
T ss_dssp SCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS---SCCCEEECCC-CCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEE
T ss_pred CCceEEECCCCeeecceeechHHHHHHHHHhCC---CCCeEEECCC-CceehHHHHHHHHHHhCCccccccccccccchh
Confidence 44 556788999999999999999999999874 4689999997 799999999999999985443221111110000
Q ss_pred c----cc--------------ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 327 S----KE--------------FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 327 ~----~~--------------~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
. .. ....+........+|++|++++|||+|+++++|+|+++++++.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~ 353 (357)
T d1db3a_ 287 VSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA 353 (357)
T ss_dssp EEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHH
Confidence 0 00 0000112334557899999999999999999999999998876654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.1e-50 Score=373.01 Aligned_cols=335 Identities=35% Similarity=0.658 Sum_probs=266.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH-hhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG-LIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~-~~~~~d~Vih~ 96 (390)
|||||||||||||++|+++|++++.++|+++++.......+.. .++++++.+|+++.+.+.+ +++++|+|||+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~------~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~ 74 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN------HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT------CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc------CCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence 6899999999999999999999833689999987765554443 3689999999998766554 66679999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
|+......+..++...+..|+.++.+++++|.+.+.+++|+||..+|+........+..+... ..
T Consensus 75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~---------------~~ 139 (342)
T d2blla1 75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLI---------------VG 139 (342)
T ss_dssp BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCB---------------CC
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccccccccccccccccccccccc---------------cc
Confidence 999877677778888999999999999999999998889999999999887655555443221 12
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
+...|.+.|+.+|.++|.+++.++++++++++++|++.+|||...... ++.......+..++.+++.|+++.++++|
T Consensus 140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 216 (342)
T d2blla1 140 PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLN---AARIGSSRAITQLILNLVEGSPIKLIDGG 216 (342)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTT---CSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred ccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccc---cccccccccchHHHHHHHhCCCccccCCC
Confidence 334577899999999999999999999999999999999999765321 22334556788999999999999999999
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC--cccccCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS--SKEFYGE 333 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 333 (390)
++.++|+|++|+|+++..+++++. ...+++||+++++..+|+.++++.+.+.++........+....... ...+...
T Consensus 217 ~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
T d2blla1 217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK 296 (342)
T ss_dssp CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC--------
T ss_pred CeeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccc
Confidence 999999999999999999999853 2457899998764468999999999999997766555443222211 1111222
Q ss_pred CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 334 GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 334 ~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
...+.....+|++|++++|||+|+++++|+|+++++||+++.+
T Consensus 297 ~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~ 339 (342)
T d2blla1 297 GYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (342)
T ss_dssp ----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred ccccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence 2233445678999999999999999999999999999998764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3.6e-50 Score=373.90 Aligned_cols=322 Identities=18% Similarity=0.250 Sum_probs=268.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----hhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
+.+|+|||||||||||++|+++|+++ |++|++++|.... ...............++++.+|+.|...+......+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 92 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 92 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence 35689999999999999999999999 9999999874321 111111111111357899999999999999998999
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccC
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
++|+|+++......+..++...++.|+.|+.+|+++|++.+ ++|||+||.++||.....+.+|++|..
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~----------- 161 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGK----------- 161 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCC-----------
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCC-----------
Confidence 99999999877666778888999999999999999999999 899999999999998888888888763
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCC
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (390)
|.+.|+.+|.++|.++..+++.++++++++||+++|||+.. +......++..++..+..|++
T Consensus 162 -----------p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~-------~~~~~~~~i~~~~~~~~~g~~ 223 (341)
T d1sb8a_ 162 -----------PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD-------PNGAYAAVIPKWTSSMIQGDD 223 (341)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCC-------CCSTTCCHHHHHHHHHHHTCC
T ss_pred -----------CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcC-------CCCchhhhHHHHHHHHHcCCc
Confidence 66789999999999999999999999999999999999876 333345688899999999999
Q ss_pred eEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccc
Q 016370 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKE 329 (390)
Q Consensus 250 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 329 (390)
+.+.|+|.+.++|+|++|+|.++..++.......+++||++++ +..|+.++++.|.+.++.......... .
T Consensus 224 i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~-~~~si~~i~~~i~~~~~~~~~~~~~~~--------~ 294 (341)
T d1sb8a_ 224 VYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVG-GRTSLNQLFFALRDGLAENGVSYHREP--------V 294 (341)
T ss_dssp CEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHTTCCCCCCC--------E
T ss_pred eEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeeccc-ccchHHHHHHHHHHHhccccccccccc--------c
Confidence 9999999999999999999999999998875567789999996 799999999999999987643222111 1
Q ss_pred ccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 330 FYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 330 ~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+......+.....+|++|+++.|||+|+++++++|+++++||++.+
T Consensus 295 ~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~~~ 340 (341)
T d1sb8a_ 295 YRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMFL 340 (341)
T ss_dssp EECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhc
Confidence 1112223444567899999999999999999999999999999865
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=3.9e-49 Score=367.59 Aligned_cols=323 Identities=19% Similarity=0.230 Sum_probs=254.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
||||||||||||||++|+++|+++ |++|.++.++.................+++++.+|++|.+.+..++..++.|+|+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~-g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNN-HPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHH-CTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHC-CCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 799999999999999999999999 8876555443211000000000112468999999999999999999999999999
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccC
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~ 176 (390)
|+......+..++...++.|+.++.++++++...+.++|++||..+||... ..++.+...........|+.
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~---~~~~~~~~~~~~~~~~~e~~------ 151 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLP---LREDLPGHGEGPGEKFTAET------ 151 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBC---CGGGSTTTTCSTTSSBCTTS------
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccC---ccccccccccCcccccccCC------
Confidence 998876666678889999999999999999999999999999999998642 22222222221111222222
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCC
Q 016370 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256 (390)
Q Consensus 177 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (390)
...|.+.|+.+|.++|.+++.+++.++++++++||+.+|||+.. ....+..++.....+.++.+++++
T Consensus 152 -~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~-----------~~~~~~~~i~~~~~~~~~~i~~~g 219 (346)
T d1oc2a_ 152 -NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH-----------IEKFIPRQITNILAGIKPKLYGEG 219 (346)
T ss_dssp -CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC-----------TTSHHHHHHHHHHHTCCCEEETTS
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCC-----------ccchhHHHHHHHHcCCceeEeCCC
Confidence 22477899999999999999999999999999999999999754 235778888888889999999999
Q ss_pred cceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCC
Q 016370 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD 336 (390)
Q Consensus 257 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
.+.++|+|++|+|+++..+++++. .++.||++++ +..++.++++.+.+.++.......... ....
T Consensus 220 ~~~r~~i~v~D~a~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~~ 284 (346)
T d1oc2a_ 220 KNVRDWIHTNDHSTGVWAILTKGR--MGETYLIGAD-GEKNNKEVLELILEKMGQPKDAYDHVT------------DRAG 284 (346)
T ss_dssp CCEEECEEHHHHHHHHHHHHHHCC--TTCEEEECCS-CEEEHHHHHHHHHHHTTCCTTCSEEEC------------CCTT
T ss_pred CccccccchhhHHHHHHHHHhhcc--cCcccccccc-ccccchHHHHHHHHHhCCCCcceEECC------------CCCC
Confidence 999999999999999999999875 6789999997 799999999999999987543322111 1113
Q ss_pred CCCCCcCcHHHHHHhcCccccc-CHHHHHHHHHHHHHHhHh
Q 016370 337 DSDKRIPDMTIINQQLGWNPKT-SLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 337 ~~~~~~~d~~k~~~~lg~~p~~-~~~~~l~~~~~~~~~~~~ 376 (390)
....+.+|++|++++|||+|++ +++++|+++++||++|.+
T Consensus 285 ~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n~~ 325 (346)
T d1oc2a_ 285 HDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD 325 (346)
T ss_dssp CCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTHH
T ss_pred CCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 3445678999999999999997 699999999999998755
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-48 Score=361.74 Aligned_cols=322 Identities=19% Similarity=0.316 Sum_probs=250.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vih 95 (390)
|||||||||||||++|++.|+++ |++|++++|..................+++++++|++|.+.+.++++ ++|+|||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH 79 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 68999999999999999999999 99999998743221111000000013589999999999999999998 5999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
+||..+...+..++...+++|+.||.+++++|++.+ +++|++||.++|+.....+..|..+.
T Consensus 80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~----------------- 142 (338)
T d1udca_ 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPT----------------- 142 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCC-----------------
T ss_pred CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccccccccc-----------------
Confidence 999876666667888999999999999999999999 99999999999988765544444332
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhh-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc-CCCeEE
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-RQPLKL 252 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 252 (390)
..|.+.|+.+|..+|.++..+... .+++++++|++.+|||+..+..+ ..|......+++.++..+.. +.++.+
T Consensus 143 ----~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~i~i 217 (338)
T d1udca_ 143 ----GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMG-EDPQGIPNNLMPYIAQVAVGRRDSLAI 217 (338)
T ss_dssp ----CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSC-CCCCSSCCSHHHHHHHHHTTSSSCEEE
T ss_pred ----CCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCC-CCccccHHHHHHHHHHHHhcCCCCEEE
Confidence 136779999999999999876555 48999999999999997653211 11223334566777766655 456777
Q ss_pred ecC------CcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 253 VDG------GQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 253 ~~~------~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
.|+ +.+.+||+|++|++.++..+..... ...+++||++++ +.+|+.|+++.+.+.+|.+......+.
T Consensus 218 ~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~-~~~si~e~~~~i~~~~g~~~~~~~~~~----- 291 (338)
T d1udca_ 218 FGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAG-VGNSVLDVVNAFSKACGKPVNYHFAPR----- 291 (338)
T ss_dssp ECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCS-SCEEHHHHHHHHHHHHTSCCCEEEECC-----
T ss_pred eCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCC-CCCcHHHHHHHHHHHHCCCCceEECCC-----
Confidence 664 6788999999999988887766422 134579999997 799999999999999997654433221
Q ss_pred CcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 326 SSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.........+|++|+++.|||+|+++++|+|+++++|+++|.+
T Consensus 292 --------~~~~~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~~~ 334 (338)
T d1udca_ 292 --------REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_dssp --------CTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred --------CCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhchh
Confidence 1123345678999999999999999999999999999999854
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=5.7e-48 Score=355.94 Aligned_cols=313 Identities=18% Similarity=0.179 Sum_probs=254.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh--ccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~V 93 (390)
|+|||||||||||++|+++|+++ ||+|++++|..+... .+... ...++++++.+|++|.+.+..++.. ++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 76 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKAQPQEV 76 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcccHHHHHHh---cccCCcEEEEccccChHHhhhhhcccccccc
Confidence 68999999999999999999999 999999999754321 11111 1235799999999999999998876 7899
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
+|+|+.........++...+..|+.|+.+++++|++.+ ++|+++||..+|+.......+|++|..
T Consensus 77 ~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~------------- 143 (321)
T d1rpna_ 77 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY------------- 143 (321)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC-------------
T ss_pred ccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcc-------------
Confidence 99998887767777888999999999999999999988 689999999999988777777777663
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc-CCCe
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR-RQPL 250 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (390)
|.+.|+.+|.++|.++..+++.++++++++||+++|||..+. ....+.+..++.+... +.+.
T Consensus 144 ---------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~--------~~~~~~i~~~~~~~~~~~~~~ 206 (321)
T d1rpna_ 144 ---------PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI--------EFVTRKVTDAVARIKLGKQQE 206 (321)
T ss_dssp ---------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHTTSCSC
T ss_pred ---------ccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccc--------cccHHHHHHHHHHHHhCCCCc
Confidence 667899999999999999999999999999999999997541 2333444455555444 4556
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccc
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 330 (390)
...|++++.++|+|++|+|+++.++++++. ++.||++++ +..|+.++++++.+.++..........+...
T Consensus 207 i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~---~~~~ni~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 276 (321)
T d1rpna_ 207 LRLGNVDAKRDWGFAGDYVEAMWLMLQQDK---ADDYVVATG-VTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF------ 276 (321)
T ss_dssp EEESCTTCEEECEEHHHHHHHHHHHHHSSS---CCCEEECCS-CEEEHHHHHHHHHHTTTCCGGGTEEECGGGC------
T ss_pred EEECCCCeEEccEEeHHHHHHHHHHHhcCC---cCCceeccc-ccceehhhhHHHHHHhCCCccceeecCCCCC------
Confidence 667899999999999999999999999863 578999997 8999999999999999875433222211111
Q ss_pred cCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhH
Q 016370 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377 (390)
Q Consensus 331 ~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 377 (390)
++.+......|++|+++.|||+|+++++|+|+++++|+.++.++
T Consensus 277 ---rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~~~~~ 320 (321)
T d1rpna_ 277 ---RPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVSR 320 (321)
T ss_dssp ---CSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHhcC
Confidence 11334456789999999999999999999999999999987665
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.7e-47 Score=358.88 Aligned_cols=316 Identities=20% Similarity=0.246 Sum_probs=255.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
..|||||||||||||++|+++|+++ ||+|+++++......... ....++..+|+.+.+.+..+++++|+|||
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~d~Vih 85 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTED-------MFCDEFHLVDLRVMENCLKVTEGVDHVFN 85 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGG-------GTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCCccchhhh-------cccCcEEEeechhHHHHHHHhhcCCeEee
Confidence 4589999999999999999999999 999999987654322111 24668899999999999999999999999
Q ss_pred eccccCCccc-cCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 96 LAAICTPADY-NTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 96 ~a~~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
+|+....... ...+...+..|+.++.+++++|++.+ ++|||+||..+|+.....+.++......
T Consensus 86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~-------------- 151 (363)
T d2c5aa1 86 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKES-------------- 151 (363)
T ss_dssp CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGG--------------
T ss_pred cccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccc--------------
Confidence 9987754322 45677888999999999999999999 9999999999999877655544332110
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
-..+..|.+.|+.+|.++|.+++.+.+++|++++++||+.+|||+.... ..........+........+...+
T Consensus 152 -e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 224 (363)
T d2c5aa1 152 -DAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK------GGREKAPAAFCRKAQTSTDRFEMW 224 (363)
T ss_dssp -GGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCS------SSCCCHHHHHHHHHHHCSSCEEEE
T ss_pred -cCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccc------cccccccccccccccccccccccc
Confidence 0112247789999999999999999999999999999999999976521 111223344455566667778888
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCC
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGE 333 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
++|.+.++|+|++|+|+++..+++.. .+++||++++ +.+|+.|+++++.+.+|++..+...+.+
T Consensus 225 g~g~~~rd~i~v~D~~~~~~~~~~~~---~~~~~ni~~~-~~~s~~~l~~~i~~~~g~~~~i~~~~~~------------ 288 (363)
T d2c5aa1 225 GDGLQTRSFTFIDECVEGVLRLTKSD---FREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIPGP------------ 288 (363)
T ss_dssp SCSCCEECCEEHHHHHHHHHHHHHSS---CCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEECCC------------
T ss_pred CCCCeEEEEeehhHHHHHHHHHHhCC---CCCeEEEecC-CcccHHHHHHHHHHHhCCCCceEeCCCC------------
Confidence 99999999999999999999999875 4789999997 7999999999999999876554433321
Q ss_pred CCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 334 GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 334 ~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
.......+|++|+++.|||+|+++++|+|+++++||+++.++.
T Consensus 289 --~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~~~~~ 331 (363)
T d2c5aa1 289 --EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKE 331 (363)
T ss_dssp --CCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 2344567899999999999999999999999999999987753
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=350.32 Aligned_cols=325 Identities=18% Similarity=0.139 Sum_probs=253.0
Q ss_pred CEE-EEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-----hccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 18 VTI-CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-----KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 18 ~~v-lItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
||| ||||||||||++|+++|+++ ||+|++++|.++.. ..+..........+++++.+|++|.+.+..++.+
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~-g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 79 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK 79 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence 578 99999999999999999999 99999999975421 1111111112235789999999999999999976
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC----CcEEEeecccccccccCCCCCCCCCCCCCccccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN----KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYV 165 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~ 165 (390)
+++|+|+++.........++...+++|+.+|.+++++|++.+ ++|||+||++|||.....+++|++|..
T Consensus 80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~------- 152 (347)
T d1t2aa_ 80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFY------- 152 (347)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC-------
T ss_pred cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCC-------
Confidence 889999999876666667778888999999999999999987 379999999999987777788877763
Q ss_pred cccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh
Q 016370 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 245 (390)
Q Consensus 166 ~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (390)
|.+.|+.+|.++|+++..+++.++++++++||+.+|||... +......+...++....
T Consensus 153 ---------------P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~-------~~~~~~~~~~~i~~~~~ 210 (347)
T d1t2aa_ 153 ---------------PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRG-------ANFVTRKISRSVAKIYL 210 (347)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC-------TTSHHHHHHHHHHHHHH
T ss_pred ---------------CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCC-------CCccccccceeeehhhc
Confidence 67789999999999999998889999999999999999754 11222344555666677
Q ss_pred cCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccC
Q 016370 246 RRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDV 325 (390)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~ 325 (390)
.+.++...|++.+.++|+|++|+|+++..++++.. .+.|+++.. ...++.+..+.+...+++..............
T Consensus 211 ~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
T d1t2aa_ 211 GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE---PEDFVIATG-EVHSVREFVEKSFLHIGKTIVWEGKNENEVGR 286 (347)
T ss_dssp TSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS---CCCEEECCS-CCEEHHHHHHHHHHHTTCCEEEESCGGGCEEE
T ss_pred CCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC---Cccceeccc-cccccchhhhhhhhhhcceeeecccchhhhhh
Confidence 78888889999999999999999999999999863 467999986 79999999999999888754332221111100
Q ss_pred Cc--------ccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 326 SS--------KEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 326 ~~--------~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.. ......+......+.+|++|++++|||+|+++++|+|+++++|..+.++
T Consensus 287 ~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~~~~k 345 (347)
T d1t2aa_ 287 CKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMR 345 (347)
T ss_dssp ETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHh
Confidence 00 0000111233445678999999999999999999999999988766543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=8.6e-45 Score=337.03 Aligned_cols=316 Identities=18% Similarity=0.162 Sum_probs=244.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-----hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-----IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--A 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~ 90 (390)
|++||||||||||+||+++|+++ ||+|++++|..+. ...+...........++++.+|+++.+.+...++. +
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHC-cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 68999999999999999999999 9999999996532 11111111111235688999999999999998875 8
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC------CcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN------KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
|+|||+|+.........+|...+..|+.++.+++++++... .++++.||+.+|+... ...+|++|..
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~------ 153 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFH------ 153 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCC------
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCC------
Confidence 99999999887666667888999999999999999987643 5788888888887654 4566766653
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH-HHHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC-FSNN 243 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (390)
|.+.|+.+|..+|.++..+.+.++++++++||+++|||... .......+.. +...
T Consensus 154 ----------------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~--------~~~~~~~i~~~~~~~ 209 (339)
T d1n7ha_ 154 ----------------PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG--------ENFVTRKITRALGRI 209 (339)
T ss_dssp ----------------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC--------TTSHHHHHHHHHHHH
T ss_pred ----------------CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC--------CCCCcchhhHHHHHH
Confidence 67799999999999999999999999999999999999754 1222333333 3344
Q ss_pred HhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcc
Q 016370 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323 (390)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~ 323 (390)
.....+..+.|++.+.++|+|++|+|+++..+++++. ...+++..+ ...+..++++++.+.++............
T Consensus 210 ~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~---~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~- 284 (339)
T d1n7ha_ 210 KVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK---PDDYVVATE-EGHTVEEFLDVSFGYLGLNWKDYVEIDQR- 284 (339)
T ss_dssp HHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS---CCEEEECCS-CEEEHHHHHHHHHHHTTCCGGGTEEECGG-
T ss_pred hcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCC---CCccccccc-cccccchhhhhhhhhhhcccCceeeeccC-
Confidence 4555666777899999999999999999999999874 446667765 69999999999999998654322211111
Q ss_pred cCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHH
Q 016370 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378 (390)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~ 378 (390)
..+......+.+|++|++++|||+|+++++|+|+++++||.+..++.
T Consensus 285 --------~~r~~~~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~~~~~ 331 (339)
T d1n7ha_ 285 --------YFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 331 (339)
T ss_dssp --------GSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHhhh
Confidence 11123345667899999999999999999999999999998876554
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.4e-45 Score=340.94 Aligned_cols=318 Identities=17% Similarity=0.244 Sum_probs=240.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vi 94 (390)
|.|||||||||||++|+++|+++ |++|+++++..... ...... ......+++++.+|++|.+.++.++. ++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~-g~~V~~~d~~~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARL-EVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCTHHHHHH-HHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-cCeEEEEECCCCcchhHHHhH-HhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 56999999999999999999999 99999998643211 100000 00013589999999999999999987 599999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCC----CCCCCCCCCCCccccccccC
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGS----FLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~----~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|+...+.....++.....+|+.++.+++++|++.+ ++|||+||.+|||..... +++|+.+.
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~------------ 147 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL------------ 147 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC------------
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCC------------
Confidence 9999887666777888899999999999999999999 999999999999976542 23333333
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhh--hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-c
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGA--ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-R 246 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (390)
.|.+.|+.+|.++|.+++.+.+ ..+++++++|++.+||+......+. ++......++..+...+. .
T Consensus 148 ----------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~ 216 (347)
T d1z45a2 148 ----------GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGE-DPLGIPNNLLPYMAQVAVGR 216 (347)
T ss_dssp ----------CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCC-CCSSSCCSHHHHHHHHHTTS
T ss_pred ----------CCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCC-CccccHHHHHHHHHHHHhcC
Confidence 3677999999999999998864 3579999999999999876532221 222223345665555554 3
Q ss_pred CCCeEEecCC------cceeeeeeHHHHHHHHHHHHhCCC-----CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCC
Q 016370 247 RQPLKLVDGG------QSQRTFIYIKDAIEAVLLMIENPA-----RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315 (390)
Q Consensus 247 ~~~~~~~~~~------~~~~~~i~v~D~a~~~~~~l~~~~-----~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~ 315 (390)
+.++.++|++ ...+|++++.|++.++..+++... ...+++||++++ +++|+.|+++.+.+.+|.+...
T Consensus 217 ~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~-~~~s~~e~~~~i~~~~~~~~~~ 295 (347)
T d1z45a2 217 REKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-KGSTVFEVYHAFCKASGIDLPY 295 (347)
T ss_dssp SSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTCCCCC
T ss_pred CCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCC-CcccHHHHHHHHHHHHCCCCce
Confidence 5566666554 456789999999999988876421 124589999997 7999999999999999976544
Q ss_pred cccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
...+. +..+.....+|++|++++|||+|+++++|+|+++++|+++|
T Consensus 296 ~~~~~-------------~~~~~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n 341 (347)
T d1z45a2 296 KVTGR-------------RAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 341 (347)
T ss_dssp ----------------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred EeCCC-------------CCCCCCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence 33221 11234456789999999999999999999999999999987
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-45 Score=339.39 Aligned_cols=322 Identities=19% Similarity=0.275 Sum_probs=245.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc------cccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL------EPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
|||||||||||||++|+++|+++ |++|+++++......... +........+++++.+|++|.+.+.+++.+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~-g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence 68999999999999999999999 999999986332111000 000000135889999999999999998876
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccccccc
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e 168 (390)
+++|+|+||..++..+..+|.+.++.|+.++.++++++++.+ ++|||+||+.+|+........+..+.
T Consensus 82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~----------- 150 (346)
T d1ek6a_ 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPT----------- 150 (346)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCC-----------
T ss_pred cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccc-----------
Confidence 778999999887777777899999999999999999999999 99999999999998764433332222
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-c
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-R 246 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 246 (390)
..|.++|+.+|..+|..++.+++. .+++++++|++.+|||......+. .+......++..++..+. .
T Consensus 151 ----------~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 219 (346)
T d1ek6a_ 151 ----------GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGE-DPQGIPNNLMPYVSQVAIGR 219 (346)
T ss_dssp ----------CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCC-CCSSSCCSHHHHHHHHHHTS
T ss_pred ----------cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCc-cccccHHHHHHHHHHHHHcC
Confidence 136678999999999999988765 489999999999999975421110 011122345555555443 4
Q ss_pred CCCeEEec------CCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 247 RQPLKLVD------GGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 247 ~~~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+.++.+.| ++.+.|||+|++|+|.++..++.... ...+++||++++ +.+|+.|+++.|.+.+|.+......+
T Consensus 220 ~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~-~~~s~~dl~~~i~~~~~~~~~~~~~~ 298 (346)
T d1ek6a_ 220 REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-TGYSVLQMVQAMEKASGKKIPYKVVA 298 (346)
T ss_dssp SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-CCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred CCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCC-CcccHHHHHHHHHHHhCCCCCeEECC
Confidence 56666654 46678999999999999988765432 135579999997 79999999999999999765443332
Q ss_pred CCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
.+ ..+.....+|++|+++.|||+|+++++|+|+++++||++|-+
T Consensus 299 ~~-------------~~e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~ 342 (346)
T d1ek6a_ 299 RR-------------EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS 342 (346)
T ss_dssp CC-------------TTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred CC-------------CCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHh
Confidence 21 123445678999999999999999999999999999998753
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=9.8e-44 Score=335.44 Aligned_cols=328 Identities=17% Similarity=0.296 Sum_probs=241.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh----------------hhccccccccCCCCCeeEEeCCCCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----------------IKHLLEPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~----------------~~~~~~~~~~~~~~~i~~~~~D~~d~ 80 (390)
.|||||||||||||++|+++|+++.||+|+++++-... ...............+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 47999999999999999999998669999999752110 00000111111235688999999999
Q ss_pred hHHHHhhcc---ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCC-CCCC
Q 016370 81 SRLEGLIKM---ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFL-PKDS 155 (390)
Q Consensus 81 ~~~~~~~~~---~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~-~e~~ 155 (390)
+.+.++++. +|+|||+|+.........++...+..|+.++.++++++++.+ ++++++||..+|+....... .+..
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 999999874 799999999887666667788889999999999999999999 99999999999987654222 2222
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCC--CCCCCCc
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGI--DGPSEGV 233 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~--~~~~~~~ 233 (390)
+...+ ....|.+.|+.+|..+|.++..+.+.++++++++|++.+|||+....... .++...+
T Consensus 162 ~~~e~----------------~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~i 225 (383)
T d1gy8a_ 162 PIDIN----------------AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLI 225 (383)
T ss_dssp CBCTT----------------SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHH
T ss_pred ccccc----------------cCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhH
Confidence 22111 12247889999999999999999988999999999999999987531110 1111112
Q ss_pred hhhHHHHHHH------------HhcCCCeEEec------CCcceeeeeeHHHHHHHHHHHHhCCC-------CCCCceEE
Q 016370 234 PRVLACFSNN------------LLRRQPLKLVD------GGQSQRTFIYIKDAIEAVLLMIENPA-------RANGHIFN 288 (390)
Q Consensus 234 ~~~~~~~~~~------------~~~~~~~~~~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-------~~~~~~~n 288 (390)
+.++..++.. ...+.++.+.| +|.+.|+|+|++|+|+++..+++... ...+++||
T Consensus 226 p~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~N 305 (383)
T d1gy8a_ 226 PIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFN 305 (383)
T ss_dssp HHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEE
T ss_pred HHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEE
Confidence 2222323222 22345566654 47888999999999999999987421 12457999
Q ss_pred ecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHH-
Q 016370 289 VGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST- 367 (390)
Q Consensus 289 v~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~- 367 (390)
++++ +.+|+.|+++++.+.+|.+......+. +..+.....+|++|++++|||+|+++++|+|+++
T Consensus 306 i~s~-~~~s~~el~~~i~~~~~~~~~~~~~~~-------------~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~ 371 (383)
T d1gy8a_ 306 LGTS-RGYSVREVIEVARKTTGHPIPVRECGR-------------REGDPAYLVAASDKAREVLGWKPKYDTLEAIMETS 371 (383)
T ss_dssp ESCS-CCEEHHHHHHHHHHHHCCCCCEEEECC-------------CTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHH
T ss_pred eCCC-CceeHHHHHHHHHHHhCCCCceEECCC-------------CCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHH
Confidence 9997 799999999999999997654433221 1123445678999999999999999999999887
Q ss_pred HHHHHHh
Q 016370 368 LTYQHRT 374 (390)
Q Consensus 368 ~~~~~~~ 374 (390)
+.|++.|
T Consensus 372 ~~w~~~~ 378 (383)
T d1gy8a_ 372 WKFQRTH 378 (383)
T ss_dssp HHHHHTC
T ss_pred HHHHHhC
Confidence 5788775
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.6e-44 Score=326.95 Aligned_cols=300 Identities=21% Similarity=0.281 Sum_probs=239.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|||||||||||||++|+++|+++ |+.|++++++. ..|+.+.+.+.+++.. +|+|||
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~-g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~~~d~v~~ 60 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQR-GDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYL 60 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-TTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-cCEEEEecCch---------------------hccccCHHHHHHHHhhcCCCEEEE
Confidence 68999999999999999999999 89988776532 2689999999998875 999999
Q ss_pred eccccCCc-cccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 96 LAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 96 ~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
+|+..+.. ....++...++.|+.+|.+++++|++.+ +||||+||.+|||.....+++|+.+....
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~------------- 127 (315)
T d1e6ua_ 61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT------------- 127 (315)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC-------------
T ss_pred cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCC-------------
Confidence 99876532 2334566778899999999999999999 89999999999998877777776654321
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCch--hhHHHHHHHHhcCCCeE
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP--RVLACFSNNLLRRQPLK 251 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 251 (390)
...|.+.|+.+|.++|++++.+++++|++++++||+++|||+..+.. ...... ............+.++.
T Consensus 128 ----~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
T d1e6ua_ 128 ----LEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHP----SNSHVIPALLRRFHEATAQKAPDVV 199 (315)
T ss_dssp ----CCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCT----TCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred ----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCc----cccccceeeeccchhhhhccCCceE
Confidence 11245689999999999999999999999999999999999875311 111111 22334455667788889
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCC-------CCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCccc
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-------RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-------~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~ 324 (390)
+.|++.+.++|+|++|+++++..++++.. ......+|++.+ ...++.++++++.+.++.+..+...+.
T Consensus 200 ~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~i~~~~~~~~~i~~~~~---- 274 (315)
T d1e6ua_ 200 VWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG-VDCTIRELAQTIAKVVGYKGRVVFDAS---- 274 (315)
T ss_dssp EESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS-CCEEHHHHHHHHHHHHTCCSEEEEETT----
T ss_pred EcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCC-cchHHHHHHHHHHHHhCCCcceEECCC----
Confidence 99999999999999999999999997642 124578999997 799999999999999987654332211
Q ss_pred CCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhH
Q 016370 325 VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375 (390)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 375 (390)
+........+|++|++ +|||+|+++++|+|+++++||++|+
T Consensus 275 ---------~~~~~~~~~~d~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 275 ---------KPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp ---------SCCCCSBCCBCCHHHH-HTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred ---------CCCCCceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1123345678999996 6999999999999999999999863
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=7.7e-44 Score=337.35 Aligned_cols=344 Identities=16% Similarity=0.113 Sum_probs=243.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh----hccc------------cccccCCCCCeeEEeCCCCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI----KHLL------------EPESQTGADRIQFHRLNIKHD 80 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~------------~~~~~~~~~~i~~~~~D~~d~ 80 (390)
||||||||||||||++|+++|+++ ||+|+++|...... .... ........++++++.+|++|.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~-g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~ 79 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 79 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence 689999999999999999999999 99999997321100 0000 000000125789999999999
Q ss_pred hHHHHhhcc--ccEEEEeccccCCccccCC---hhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCCCCCC
Q 016370 81 SRLEGLIKM--ADLTINLAAICTPADYNTR---PLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 81 ~~~~~~~~~--~d~Vih~a~~~~~~~~~~~---~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
+.+..++++ +|+|||+|+......+..+ +...+..|+.||.+++++|++.+ ++++++||..+|+..... ..+
T Consensus 80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~-~~~ 158 (393)
T d1i24a_ 80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNID-IEE 158 (393)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSC-BCS
T ss_pred HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccc-ccc
Confidence 999999986 7999999998765444433 44577899999999999999988 678888888888765421 111
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCC------C
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGI------D 227 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~------~ 227 (390)
... ...++........+..|.+.|+.+|+.+|.++..++++++++++++||+++|||+.+..... .
T Consensus 159 ~~~--------~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~ 230 (393)
T d1i24a_ 159 GYI--------TITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRL 230 (393)
T ss_dssp SEE--------EEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCC
T ss_pred ccc--------cccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccc
Confidence 110 00111000011122347789999999999999999999999999999999999976421100 0
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEe-cCCCCcccHHHHHHHHH
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV-GNPHNEVTVRQLAEMMT 306 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv-~~~~~~~s~~~l~~~i~ 306 (390)
+.......++..++.+...++++.++|++.+.|||+|++|+|+++..++++... .+..+.+ +++ +.+|+.++++++.
T Consensus 231 ~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~-~g~~~~~~~~~-~~~si~el~~~i~ 308 (393)
T d1i24a_ 231 DYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK-AGEFRVFNQFT-EQFSVNELASLVT 308 (393)
T ss_dssp CCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-TTCEEEEEECS-EEEEHHHHHHHHH
T ss_pred ccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc-cceeeeecCCC-CeeEHHHHHHHHH
Confidence 011112346788889999999999999999999999999999999999998652 3332222 333 5899999999999
Q ss_pred HHhhcccCCcccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHhHHHHH
Q 016370 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQ 381 (390)
Q Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 381 (390)
+..+......... .. ...........+..|++|++ +|||+|+++++++++++++|++++.+...++
T Consensus 309 ~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~d~~k~~-~LGw~P~~~~~~~i~~~~~~~~~~k~~~~~~ 374 (393)
T d1i24a_ 309 KAGSKLGLDVKKM-TV-------PNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDRVDTK 374 (393)
T ss_dssp HHHHTTTCCCCEE-EE-------CCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGGCCGG
T ss_pred HHHHhhCCCccee-ec-------cCCCCCCCccEecCCHHHHH-HcCCccccCHHHHHHHHHHHHHHHHHhhhHh
Confidence 8766432211110 00 00111133445678999996 5999999999999999999999887654433
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=2.5e-43 Score=326.65 Aligned_cols=324 Identities=17% Similarity=0.223 Sum_probs=241.4
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh--hhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND--KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTI 94 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vi 94 (390)
||||||||||||++|+++|+++ |++|+++++... ....+.... ...+++++.+|++|.+.+.+++++ +|+||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~-g~~V~~id~~~~~~~~~~~~~~~---~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vi 77 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNKNDVTRLITKYMPDSCF 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhHHHHhh---ccCCcEEEEcccCCHHHHHHHHHhcCCceEE
Confidence 7999999999999999999999 999999975321 111111100 136899999999999999999986 69999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecc-cccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC-EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~-~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
|+|+.........++...+++|+.||.+|+++|++.+ +++|+.||. .+|+.....+..+..+..+.... ...
T Consensus 78 h~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 151 (338)
T d1orra_ 78 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDK------PNG 151 (338)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTC------TTC
T ss_pred eecccccccccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccc------ccC
Confidence 9999887666666888999999999999999999999 666666655 44444333222222111100000 000
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHh-----cC
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL-----RR 247 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 247 (390)
........|.+.|+.+|...|.++..+.+.+++..+++|++.+||+.... ......+..++..+. .+
T Consensus 152 ~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
T d1orra_ 152 YDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFA--------TYDQGWVGWFCQKAVEIKNGIN 223 (338)
T ss_dssp BCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCC--------BTTBCHHHHHHHHHHHHHTTCC
T ss_pred cccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccc--------cccccccchhhHHHHHHHhccC
Confidence 01112234778999999999999999999999999999999999876531 222334455554443 37
Q ss_pred CCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC-CCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP-HNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 248 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~-~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+++.++|+|.+.++|+|++|+|++++.++++.....+++||+..+ .+.+++.|+++.+.+.++.+......+.
T Consensus 224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~------ 297 (338)
T d1orra_ 224 KPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV------ 297 (338)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC------
T ss_pred CceEEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCC------
Confidence 789999999999999999999999999998865456789999543 2678999999999999887654433321
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~ 373 (390)
...+...+.+|++|++++|||+|+++++|+|+++++|++.
T Consensus 298 -------~~~~~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 298 -------RESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp -------CSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -------CCCCcCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence 1133445668999999999999999999999999999974
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=2.6e-40 Score=308.70 Aligned_cols=313 Identities=15% Similarity=0.195 Sum_probs=236.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~ 92 (390)
+++|||||||||||||++|++.|+++ |++|++++|..+....+.... ...++++++.+|++|++.+.++++. +|+
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~-g~~V~~~~r~~~~~~~~~~~~--~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETA--RVADGMQSEIGDIRDQNKLLESIREFQPEI 82 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSSSSCHHHHT--TTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCccHHHHhhh--hcccCCeEEEeeccChHhhhhhhhhchhhh
Confidence 36799999999999999999999999 999999999876544332211 1246899999999999999999886 899
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeeccccccccc-CCCCCCCCCCCCCccccccccC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTI-GSFLPKDSPLRQDPAYYVLKED 169 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~-~~~~~e~~~~~~~~~~~~~~e~ 169 (390)
|+|+|+......+..++...+.+|+.++.++++++++.+ ..+++.|+..+|.... ..+.+++.+.
T Consensus 83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~------------ 150 (356)
T d1rkxa_ 83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM------------ 150 (356)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB------------
T ss_pred hhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccccc------------
Confidence 999999887666667888999999999999999999887 4555555554444432 2334444443
Q ss_pred CCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---------hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHH
Q 016370 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGA---------ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240 (390)
Q Consensus 170 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 240 (390)
.|.+.|+.+|...|..+..+.. ..++.++++||+.+|||+... ...++..+
T Consensus 151 ----------~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~----------~~~~i~~~ 210 (356)
T d1rkxa_ 151 ----------GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA----------LDRIVPDI 210 (356)
T ss_dssp ----------CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC----------SSCHHHHH
T ss_pred ----------CCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch----------hhHHHHHH
Confidence 2667899999999988876654 346889999999999997531 23466777
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC---CCCceEEe--cCCCCcccHHHHHHHHHHHhhcccCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR---ANGHIFNV--GNPHNEVTVRQLAEMMTEVYAKVSGE 315 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~nv--~~~~~~~s~~~l~~~i~~~~g~~~~~ 315 (390)
+..+..+.++ +.+.+.+.++++|++|+|.++..++.+... ..+...+. ..+ +.+++.++++.+.+.++.....
T Consensus 211 ~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~ 288 (356)
T d1rkxa_ 211 LRAFEQSQPV-IIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDA-DATPVKNIVEQMVKYWGEGASW 288 (356)
T ss_dssp HHHHHTTCCE-ECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGG-GCEEHHHHHHHHHHHHCTTCCE
T ss_pred HHHHhCCCce-EEeeccccccccccccccchhhhhhhhhcccccccccccccccccc-cccccchhhhhhHHHhCCCccE
Confidence 7777666655 567888999999999999999998886421 11233333 343 6899999999999999865433
Q ss_pred cccCCCcccCCcccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHhHh
Q 016370 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376 (390)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 376 (390)
..... ....+.....+|++|++++|||+|+++++++|+++++||+...+
T Consensus 289 ~~~~~------------~~~~~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~~~~ 337 (356)
T d1rkxa_ 289 QLDGN------------AHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLS 337 (356)
T ss_dssp EC-------------------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHT
T ss_pred EEcCC------------CCCCCcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHc
Confidence 22211 01123455678999999999999999999999999999988544
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.4e-39 Score=293.53 Aligned_cols=277 Identities=14% Similarity=0.102 Sum_probs=232.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|||||||||||||++|+++|.++ ||+|++++|.. +|+.|.+.+++++++ +|+|||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~-g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~~~d~vih 58 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK-NVEVIPTDVQD----------------------LDITNVLAVNKFFNEKKPNVVIN 58 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS-SEEEEEECTTT----------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEeechh----------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence 68999999999999999999998 99999998842 589999999999985 899999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
+|+......+...+......|+..+..+.+.+...+.+++++||..+|+.....+..|.++..
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~----------------- 121 (281)
T d1vl0a_ 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVN----------------- 121 (281)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCC-----------------
T ss_pred eccccccccccccchhhcccccccccccccccccccccccccccceeeecccccccccccccc-----------------
Confidence 999887666667778888899999999999998888999999999999998777777766653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecC
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (390)
|.+.|+.+|...|.+++. .+.+++++||+.+|||+.+ +...++..+..+.++.+.+
T Consensus 122 -----~~~~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~~--------------~~~~~~~~~~~~~~~~~~~- 177 (281)
T d1vl0a_ 122 -----PQSAYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGNN--------------FVKTMINLGKTHDELKVVH- 177 (281)
T ss_dssp -----CCSHHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSSC--------------HHHHHHHHHHHCSEEEEES-
T ss_pred -----chhhhhhhhhHHHHHHHH----hCCCccccceeEEeCCCcc--------------cccchhhhhccCCceeecC-
Confidence 556899999999998855 4689999999999999865 6777888888888888875
Q ss_pred CcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCcccccCCCC
Q 016370 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGY 335 (390)
Q Consensus 256 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
++.++++|++|+|+++..++++.. .++||++++ +.+|+.|+++.+.+.+|++..+.+++... ++...
T Consensus 178 -~~~~~~i~v~D~~~~~~~~~~~~~---~g~~~~~~~-~~~s~~e~~~~i~~~~g~~~~i~~i~~~~--------~~~~a 244 (281)
T d1vl0a_ 178 -DQVGTPTSTVDLARVVLKVIDEKN---YGTFHCTCK-GICSWYDFAVEIFRLTGIDVKVTPCTTEE--------FPRPA 244 (281)
T ss_dssp -SCEECCEEHHHHHHHHHHHHHHTC---CEEEECCCB-SCEEHHHHHHHHHHHHCCCCEEEEECSTT--------SCCSS
T ss_pred -Cceeccchhhhhhhhhhhhhhhcc---cCceeEeCC-CccchHHHHHHHHHHhCCCceEEeccHHH--------cCCcC
Confidence 478999999999999999999863 469999997 79999999999999999876554443211 11111
Q ss_pred CCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHH
Q 016370 336 DDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372 (390)
Q Consensus 336 ~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~ 372 (390)
..+....+|++|+++.|||+|+ +|+++|+++++|++
T Consensus 245 ~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 245 KRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp CCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred CCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 1223345899999999999988 99999999999985
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=2e-38 Score=294.32 Aligned_cols=321 Identities=15% Similarity=0.115 Sum_probs=224.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
++++|||||||||||++|+++|+++ |++|+++.|+.++...+...... ........+.+|+.|.+.+..++.++|+|+
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~-G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 4689999999999999999999999 99999999987654433221111 112345568899999999999999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeeccccccccc----CCCCCCCCCCCCCcccccccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTI----GSFLPKDSPLRQDPAYYVLKE 168 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~----~~~~~e~~~~~~~~~~~~~~e 168 (390)
|+++... ...++...+..|+.||.+++++|.+.+ ++|||+||..+++... +...+|+.... .+ ..+
T Consensus 89 ~~a~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~-~~----~~~ 160 (342)
T d1y1pa1 89 HIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL-ES----IDK 160 (342)
T ss_dssp ECCCCCS---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH-HH----HHH
T ss_pred hhccccc---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccc-cc----ccc
Confidence 9999764 344566788899999999999998875 9999999976543321 11112211100 00 000
Q ss_pred CCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhc
Q 016370 169 DASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246 (390)
Q Consensus 169 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (390)
...........|.+.|+.+|..+|.+++.+.+.+ +++++++||+.+|||.... . .....+..++..+..
T Consensus 161 -~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~-------~-~~~~~~~~~~~~l~~ 231 (342)
T d1y1pa1 161 -AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP-------E-TQSGSTSGWMMSLFN 231 (342)
T ss_dssp -HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCT-------T-TCCCHHHHHHHHHHT
T ss_pred -cccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCc-------c-ccccchHHHHHHHHc
Confidence 0000111233467789999999999999987765 4778999999999997542 1 123456777788888
Q ss_pred CCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCC
Q 016370 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVS 326 (390)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~ 326 (390)
+...... .+.+.++|+|++|+|++++.+++++. .++.|+++++ +.+|+.|++++|.+.++........+... .
T Consensus 232 g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~-~~~t~~eia~~i~k~~p~~~~~~~~~~~~--~- 304 (342)
T d1y1pa1 232 GEVSPAL-ALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTA-GTFDWNTVLATFRKLYPSKTFPADFPDQG--Q- 304 (342)
T ss_dssp TCCCHHH-HTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECC-EEECHHHHHHHHHHHCTTSCCCCCCCCCC--C-
T ss_pred CCcCccc-CCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcC-CceEHHHHHHHHHHHcCCCcCCccCCccC--c-
Confidence 7765554 34567899999999999999999875 3455777876 69999999999999875432211111000 0
Q ss_pred cccccCCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHH
Q 016370 327 SKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370 (390)
Q Consensus 327 ~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 370 (390)
...........+..+.|||.|.++++++|+++++.
T Consensus 305 ---------~~~~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 305 ---------DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp ---------CCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred ---------ccccccchHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence 00001112234445679999999999999999864
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-37 Score=279.35 Aligned_cols=297 Identities=18% Similarity=0.212 Sum_probs=202.6
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHH-Hh-----hccccE
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLE-GL-----IKMADL 92 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~-~~-----~~~~d~ 92 (390)
|||||||||||++|+++|+++ |+ +|+++++......... ..+....|+.+.+.+. .. +..+++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~-g~~~V~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVN---------LVDLNIADYMDKEDFLIQIMAGEEFGDVEA 71 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCCCEEEEECCSSGGGGHH---------HHTSCCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred EEEecCccHHHHHHHHHHHhC-CCCeEEEEECCCCcchhhc---------ccccchhhhccchHHHHHHhhhhcccchhh
Confidence 899999999999999999999 75 7999875433221110 0011122333333222 22 234899
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
|+|+|+.... ...+.......|+.++.+++++++..+.++|+.||..+|+.......+++.+.
T Consensus 72 i~~~aa~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~--------------- 134 (307)
T d1eq2a_ 72 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYE--------------- 134 (307)
T ss_dssp EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGC---------------
T ss_pred hhhhcccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccc---------------
Confidence 9999987653 33455667788899999999999999977888888888877654444333322
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (390)
.|.+.|+.+|..+|.+++.+.++++++++++||+.+|||+..+ ......++..++.++..++...+
T Consensus 135 -------~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 200 (307)
T d1eq2a_ 135 -------KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGH-------KGSMASVAFHLNTQLNNGESPKL 200 (307)
T ss_dssp -------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGG-------GGGGSCHHHHHHHHHHC------
T ss_pred -------ccccccccccchhhhhccccccccccccccccceeEeeccccc-------cccccccccccccccccccceee
Confidence 3667899999999999999999999999999999999997652 12233456677777777765554
Q ss_pred -ecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 253 -VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 253 -~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
.|++...++|+|++|+++++..++.+. ..+.||++++ +..|+.++++++.+..++. .+...+.+...
T Consensus 201 ~~g~~~~~r~~~~v~d~~~~~~~~~~~~---~~~~~~~~~~-~~~si~~i~~~i~~~~~~~-~i~~~~~~~~~------- 268 (307)
T d1eq2a_ 201 FEGSENFKRDFVYVGDVADVNLWFLENG---VSGIFNLGTG-RAESFQAVADATLAYHKKG-QIEYIPFPDKL------- 268 (307)
T ss_dssp -------CBCEEEHHHHHHHHHHHHHHC---CCEEEEESCS-CCBCHHHHHHHC--------------------------
T ss_pred ecCccceeeeeeecccHHHHHHHHhhhc---cccccccccc-cchhHHHHHHHHHHhcCCC-CeeEeeCCccC-------
Confidence 477888999999999999999999976 4579999997 7999999999998876532 22222211100
Q ss_pred CCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHH
Q 016370 332 GEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371 (390)
Q Consensus 332 ~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~ 371 (390)
..........|++|+++.+||+|+++++|+|+++++|+
T Consensus 269 --~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 269 --KGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp -----CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred --CCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 00122234569999999999999999999999999996
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=100.00 E-value=7.4e-35 Score=264.39 Aligned_cols=290 Identities=14% Similarity=0.088 Sum_probs=219.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
|||||||||||||++|++.|.++ |+ +++++++... +.+|+.|.+.+++++++ +|+|||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~-g~-~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~~~D~Vih 60 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV-GN-LIALDVHSKE------------------FCGDFSNPKGVAETVRKLRPDVIVN 60 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT-SE-EEEECTTCSS------------------SCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CC-EEEEECCCcc------------------ccCcCCCHHHHHHHHHHcCCCEEEE
Confidence 78999999999999999999988 65 4455544321 24799999999999985 799999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCccc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIF 175 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~ 175 (390)
|||...+..+..++...+..|+.++.+|+++|++.+.+++++||+.+|+.....+.+|+.+..
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~----------------- 123 (298)
T d1n2sa_ 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATS----------------- 123 (298)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCC-----------------
T ss_pred ecccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccC-----------------
Confidence 999887777788898999999999999999999999999999999999988777777777653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecC-CCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 176 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG-PRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 176 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
|.+.|+.+|..+|..++.+. ....++|++.+|+ ++.+ ....+...+..+.++.+.+
T Consensus 124 -----p~~~y~~~k~~~e~~~~~~~----~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~ 180 (298)
T d1n2sa_ 124 -----PLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGNN--------------FAKTMLRLAKERQTLSVIN 180 (298)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSCC--------------HHHHHHHHHHHCSEEEEEC
T ss_pred -----CCchHhhhhhhhhhhHHhhh----cccccccccceeeccCCc--------------cchhhhhhhcccceeeccc
Confidence 66789999999999987654 3455666666554 4332 4445556666677766653
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhC---CCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCCCcccCCccccc
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIEN---PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFY 331 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (390)
...++++|++|+++++..++.. .. ...++||++++ +.++..++++++.+..+............ ......+
T Consensus 181 --~~~~~~~~~~d~~~~~~~~i~~~~~~~-~~~~~~n~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~i~~~~~- 254 (298)
T d1n2sa_ 181 --DQYGAPTGAELLADCTAHAIRVALNKP-EVAGLYHLVAG-GTTTWHDYAALVFDEARKAGITLALTELN-AVPTSAY- 254 (298)
T ss_dssp --SCEECCEEHHHHHHHHHHHHHHHHHCG-GGCEEEECCCB-SCEEHHHHHHHHHHHHHHHTCCCCCCEEE-EECSTTS-
T ss_pred --ceeecccccchHHHHHHHHHhhhhccc-cccccccccCC-CceecHHHHHHHHhhhhccCcccccccee-eeehhhc-
Confidence 5688999999999999888763 22 25689999997 79999999999998877654332222100 0011111
Q ss_pred CCCCCCCCCCcCcHHHHHHhcCcccccCHHHHHHHHHHHHHHh
Q 016370 332 GEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374 (390)
Q Consensus 332 ~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~ 374 (390)
......+....+|++|+++.|||+|+ +|+++|+++++++...
T Consensus 255 ~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 255 PTPASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT 296 (298)
T ss_dssp CCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred CccCCCccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence 11111123346899999999999998 9999999999887653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.2e-29 Score=213.33 Aligned_cols=202 Identities=11% Similarity=0.093 Sum_probs=161.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|.||||+||||||+||++++++|+++ ||+|+++.|++++..... ..+++++.+|+.|.+++.++++++|+||
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~-g~~V~~~~R~~~~~~~~~-------~~~~~~~~gD~~d~~~l~~al~~~d~vi 72 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEG-------PRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSS-------CCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEEcChhhccccc-------ccccccccccccchhhHHHHhcCCCEEE
Confidence 67899999999999999999999999 999999999887654432 3589999999999999999999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
|++|..... .....+..++.++++++++.+ +|||++||..+|+..... +
T Consensus 73 ~~~g~~~~~-------~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------~----------------- 122 (205)
T d1hdoa_ 73 VLLGTRNDL-------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------P----------------- 122 (205)
T ss_dssp ECCCCTTCC-------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------C-----------------
T ss_pred EEeccCCch-------hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------c-----------------
Confidence 999865321 112357788999999999999 999999999887654221 0
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
.....|...|..+|++++ +.++++||+||+.+++.... ....+.
T Consensus 123 ------~~~~~~~~~~~~~e~~l~----~~~~~~tiirp~~~~~~~~~--------------------------~~~~~~ 166 (205)
T d1hdoa_ 123 ------PRLQAVTDDHIRMHKVLR----ESGLKYVAVMPPHIGDQPLT--------------------------GAYTVT 166 (205)
T ss_dssp ------GGGHHHHHHHHHHHHHHH----HTCSEEEEECCSEEECCCCC--------------------------SCCEEE
T ss_pred ------ccccccchHHHHHHHHHH----hcCCceEEEecceecCCCCc--------------------------ccEEEe
Confidence 122368889999998874 46899999999999864321 122344
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.++.....+|+++|+|++++.++++++ ..++.+.++.
T Consensus 167 ~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~~~~~s~ 203 (205)
T d1hdoa_ 167 LDGRGPSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSH 203 (205)
T ss_dssp SSSCSSCSEEEHHHHHHHHHHTTSCST-TTTCEEEEEC
T ss_pred eCCCCCCCcCCHHHHHHHHHHHhCCCC-CCCEEEecCC
Confidence 456677889999999999999999876 4678777765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.7e-29 Score=217.22 Aligned_cols=208 Identities=12% Similarity=0.122 Sum_probs=161.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|++|+|||||||||||++|+++|+++ | ++|++++|++....... ...++...+|+.+.+.+..+++++|+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~-g~~~~v~~~~R~~~~~~~~~-------~~~i~~~~~D~~~~~~~~~~~~~~d~ 83 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDV 83 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC-CCCCEEEEEecChhhhcccc-------cceeeeeeeccccccccccccccccc
Confidence 56689999999999999999999999 6 48999999765433211 24788889999999999999999999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCC
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDAS 171 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~ 171 (390)
|||+++... ...+......+|+.++.+++++|++.+ ++|||+||..+++.
T Consensus 84 vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~-------------------------- 134 (232)
T d2bkaa1 84 GFCCLGTTR---GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------------------- 134 (232)
T ss_dssp EEECCCCCH---HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------------------------
T ss_pred ccccccccc---cccchhhhhhhcccccceeeecccccCccccccCCccccccC--------------------------
Confidence 999998652 333456778899999999999999999 99999999876543
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCc-cEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCe
Q 016370 172 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL-EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250 (390)
Q Consensus 172 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (390)
+.+.|+.+|..+|+.+... ++ +++|+||+.+||++.. ......+........+
T Consensus 135 ---------~~~~Y~~~K~~~E~~l~~~----~~~~~~IlRP~~i~G~~~~------------~~~~~~~~~~~~~~~~- 188 (232)
T d2bkaa1 135 ---------SNFLYLQVKGEVEAKVEEL----KFDRYSVFRPGVLLCDRQE------------SRPGEWLVRKFFGSLP- 188 (232)
T ss_dssp ---------CSSHHHHHHHHHHHHHHTT----CCSEEEEEECCEEECTTGG------------GSHHHHHHHHHHCSCC-
T ss_pred ---------ccchhHHHHHHhhhccccc----cccceEEecCceeecCCCc------------CcHHHHHHHHHhhccC-
Confidence 2247999999999988553 55 4899999999998754 1233344444433221
Q ss_pred EEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 251 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
........|+++|+|++++.++..+. .++.+.+.+
T Consensus 189 ----~~~~~~~~I~~~dvA~a~i~~~~~~~--~~~~~i~~~ 223 (232)
T d2bkaa1 189 ----DSWASGHSVPVVTVVRAMLNNVVRPR--DKQMELLEN 223 (232)
T ss_dssp ----TTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEEEEH
T ss_pred ----CcccCCCeEEHHHHHHHHHHHHhcCc--cCCeEEEcH
Confidence 23334457999999999999998875 456777665
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.96 E-value=2.5e-30 Score=235.73 Aligned_cols=244 Identities=12% Similarity=0.098 Sum_probs=179.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc-cccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+||||||||||||++|+++|+++ ||+|++++|++....... .........+++++.+|+.|.+.+.+++.+++++||
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 457999999999999999999999 999999999754221100 000000135799999999999999999999999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
+++.... ..|..++.+++++|.+.+ .+++++||.+++..... .+.
T Consensus 82 ~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~------~~~----------------- 127 (312)
T d1qyda_ 82 ALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME------HAL----------------- 127 (312)
T ss_dssp CCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCC------CCC-----------------
T ss_pred hhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcc------ccc-----------------
Confidence 9875421 246777889999999888 89999998665433211 111
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEec
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (390)
.|...|...|..++++. ...+++++++|++.+||+..... ...+......+.++.+++
T Consensus 128 -----~~~~~~~~~~~~~~~~~----~~~~~~~~i~r~~~~~g~~~~~~-------------~~~~~~~~~~~~~~~~~~ 185 (312)
T d1qyda_ 128 -----QPGSITFIDKRKVRRAI----EAASIPYTYVSSNMFAGYFAGSL-------------AQLDGHMMPPRDKVLIYG 185 (312)
T ss_dssp -----SSTTHHHHHHHHHHHHH----HHTTCCBCEEECCEEHHHHTTTS-------------SCTTCCSSCCSSEECCBT
T ss_pred -----chhhhhhHHHHHHHHhh----cccccceEEeccceeecCCccch-------------hhHHHHhhhccccccccc
Confidence 24446777776666654 55689999999999999754311 000111223456677788
Q ss_pred CCcceeeeeeHHHHHHHHHHHHhCCCCCCCce-EEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHI-FNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 255 ~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~-~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
++++.++|+|++|+|++++.++.++. ..++. |+++++ +.+|+.|+++.+.+.+|++......+
T Consensus 186 ~g~~~~~~i~v~Dva~a~~~~l~~~~-~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~i~ 249 (312)
T d1qyda_ 186 DGNVKGIWVDEDDVGTYTIKSIDDPQ-TLNKTMYIRPPM-NILSQKEVIQIWERLSEQNLDKIYIS 249 (312)
T ss_dssp TSCSEEEEECHHHHHHHHHHHTTCGG-GSSSEEECCCGG-GEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred ccccccceeeHHHHHHHHHHHhcCcc-ccCceEEEeCCC-cCCCHHHHHHHHHHHHCCCCeEEECC
Confidence 99999999999999999999999875 34554 566664 78999999999999999876555444
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.96 E-value=6.4e-30 Score=231.91 Aligned_cols=239 Identities=17% Similarity=0.175 Sum_probs=176.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccc--cccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP--ESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.|||||||||||||++|+++|+++ |++|++++|.+......... .......+++++.+|+.+...+...+.+++.||
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 368999999999999999999999 99999999976443211100 000013578999999999999999999999999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~ 173 (390)
|+++.. +..++.++++++...+ +++++.|+...+.... ...
T Consensus 82 ~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~-------~~~---------------- 123 (307)
T d1qyca_ 82 STVGSL---------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNV-------HAV---------------- 123 (307)
T ss_dssp ECCCGG---------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSC-------CCC----------------
T ss_pred eccccc---------------ccchhhHHHHHHHHhccccceeeeccccccccc-------ccc----------------
Confidence 998643 4556778889998888 8889888854332211 110
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEe
Q 016370 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253 (390)
Q Consensus 174 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (390)
.+...+...+...+.++ ...+++++++||+.+||+..+ .+..+......+..+.+.
T Consensus 124 ------~~~~~~~~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~--------------~~~~~~~~~~~~~~~~~~ 179 (307)
T d1qyca_ 124 ------EPAKSVFEVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLR--------------SLAQAGLTAPPRDKVVIL 179 (307)
T ss_dssp ------TTHHHHHHHHHHHHHHH----HHHTCCBEEEECCEEHHHHTT--------------TTTCTTCSSCCSSEEEEE
T ss_pred ------ccccccccccccccchh----hccCCCceecccceecCCCcc--------------chhhhhhhhhhcccceee
Confidence 12234555566666555 446899999999999998654 122223345566777888
Q ss_pred cCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccC
Q 016370 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319 (390)
Q Consensus 254 ~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~ 319 (390)
+++++.++|+|++|+|++++.+++++....+.+||++++ +.+|+.|+++.+.+.+|.+.....++
T Consensus 180 ~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~-~~~s~~ei~~~~~~~~G~~~~~~~~~ 244 (307)
T d1qyca_ 180 GDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPA-NTLSLNELVALWEKKIDKTLEKAYVP 244 (307)
T ss_dssp TTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGG-GEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred ecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCC-CccCHHHHHHHHHHHHCCCCcEEECC
Confidence 889999999999999999999999875333335666775 79999999999999999876554433
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=2.6e-26 Score=201.40 Aligned_cols=230 Identities=13% Similarity=0.104 Sum_probs=164.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe--EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK--ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
+|++|||||||||||+++++.|+++ |++ |+++.|+++....+ ..+++++.+|+.+.+.+.++++++|+|
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~-g~~v~v~~~~R~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~v 72 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKI--------GGEADVFIGDITDADSINPAFQGIDAL 72 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHT-TTTCEEEEEESCHHHHHHT--------TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCcEEEEEEcCCHHHHHhc--------cCCcEEEEeeeccccccccccccceee
Confidence 4789999999999999999999998 755 66677877655443 357899999999999999999999999
Q ss_pred EEeccccCCcc-------------ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 94 INLAAICTPAD-------------YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 94 ih~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
||+|+...... ..........+|+.++.+++..+.... .++.+.|+...+......
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~---------- 142 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL---------- 142 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG----------
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccc----------
Confidence 99998753211 112344566789999999999998888 888888886654432110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHH
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~ 239 (390)
...+...|...+...+.+ ....+++++++||+.+|||..... .
T Consensus 143 ------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~-----------~---- 185 (252)
T d2q46a1 143 ------------------NKLGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVR-----------E---- 185 (252)
T ss_dssp ------------------GGGGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSS-----------C----
T ss_pred ------------------ccccccchhhhhhhhhhh----hhcccccceeecceEEECCCcchh-----------h----
Confidence 001223455555555544 355689999999999999975411 0
Q ss_pred HHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCC--CcccHHHHHHHHHHHh
Q 016370 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPH--NEVTVRQLAEMMTEVY 309 (390)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~--~~~s~~~l~~~i~~~~ 309 (390)
...+....+ .....++||++|+|++++.+++++. ..+++|||++++ ...++.++.+++.+..
T Consensus 186 ----~~~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~~-~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 186 ----LLVGKDDEL---LQTDTKTVPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp ----EEEESTTGG---GGSSCCEEEHHHHHHHHHHHTTCGG-GTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred ----hhhccCccc---ccCCCCeEEHHHHHHHHHHHhCCcc-ccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 000111011 1334679999999999999999876 578899998742 2456777777776543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=1.8e-25 Score=192.13 Aligned_cols=196 Identities=21% Similarity=0.214 Sum_probs=137.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~V 93 (390)
+|||||||||||||++|+++|+++ |+ +|+++.|++... ...+ ..+..|..++...+. .+|+|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~-~~~~~v~~~~r~~~~~-----------~~~~---~~~~~d~~~~~~~~~~~~d~v 66 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKALAE-----------HPRL---DNPVGPLAELLPQLDGSIDTA 66 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC-TTCCEEECCBSSCCCC-----------CTTE---ECCBSCHHHHGGGCCSCCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEEEeCCchhh-----------cccc---cccccchhhhhhccccchhee
Confidence 589999999999999999999999 66 677777654221 1222 344445444444444 48999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCC
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~ 172 (390)
||++|... ....+.......|+.++.+++++|++.+ ++++|+||..+++..
T Consensus 67 i~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~-------------------------- 118 (212)
T d2a35a1 67 FCCLGTTI--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS-------------------------- 118 (212)
T ss_dssp EECCCCCH--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--------------------------
T ss_pred eeeeeeec--cccccccccccchhhhhhhccccccccccccccccccccccccc--------------------------
Confidence 99998653 2233456788899999999999999999 999999998776432
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHhhhcCc-cEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeE
Q 016370 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGL-EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251 (390)
Q Consensus 173 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (390)
.+.|+.+|..+|+.++. .++ +++|+||+.+|||...+ .+. . .. ..++.
T Consensus 119 ---------~~~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~------------~~~-~----~~-~~~~~ 167 (212)
T d2a35a1 119 ---------SIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEF------------RLA-E----IL-AAPIA 167 (212)
T ss_dssp ---------SSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCE------------EGG-G----GT-TCCCC
T ss_pred ---------ccchhHHHHHHhhhccc----cccccceeeCCcceeCCcccc------------cHH-H----HH-HHHHh
Confidence 24799999999998843 455 59999999999997651 110 0 01 11111
Q ss_pred EecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecC
Q 016370 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGN 291 (390)
Q Consensus 252 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~ 291 (390)
.... ..++.||++|+|+++..+++++. .+.+.+.+
T Consensus 168 ~~~~--~~~~~i~v~DvA~ai~~~~~~~~---~g~~~~~~ 202 (212)
T d2a35a1 168 RILP--GKYHGIEACDLARALWRLALEEG---KGVRFVES 202 (212)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTCCC---SEEEEEEH
T ss_pred hccC--CCCcEEEHHHHHHHHHHHHcCCC---CCCEEEEH
Confidence 1111 23567999999999999998863 33444444
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.91 E-value=1.6e-23 Score=193.75 Aligned_cols=238 Identities=11% Similarity=0.009 Sum_probs=169.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh-HHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS-RLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~-~~~~~~~~~d~Vih 95 (390)
.|+|||||||||||++|+++|+++ ||+|+++.|+++........ ...+++++.+|+.|.. .+..++.++|++++
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~----~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~ 77 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQ----AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 77 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHH----TSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHhC-CCeEEEEECCcchhhhhhhc----ccCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence 478999999999999999999999 99999999976543321100 1358999999999854 57788888999987
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~ 174 (390)
...... ..++..+.+++++|.+.+ +++++.||.........
T Consensus 78 ~~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~-------------------------- 119 (350)
T d1xgka_ 78 NTTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-------------------------- 119 (350)
T ss_dssp CCCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS--------------------------
T ss_pred eccccc------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc--------------------------
Confidence 754221 135677889999999999 89999998654332210
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCC-CeEEe
Q 016370 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ-PLKLV 253 (390)
Q Consensus 175 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 253 (390)
.+...|..+|...|.+++ ..+++++++|++.+++....... ..... .....+. ....+
T Consensus 120 -----~~~~~~~~~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~ 178 (350)
T d1xgka_ 120 -----WPAVPMWAPKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPY------PLFQM------ELMPDGTFEWHAP 178 (350)
T ss_dssp -----CCCCTTTHHHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSC------SSCBE------EECTTSCEEEEES
T ss_pred -----ccchhhhhhHHHHHHHHH----hhccCceeeeeceeecccccccc------ccccc------cccccccceeeec
Confidence 122357788988888764 34689999999998875433100 00000 0111121 23344
Q ss_pred cCCcceeeeeeH-HHHHHHHHHHHhCC-CCCCCceEEecCCCCcccHHHHHHHHHHHhhcccCCcccCC
Q 016370 254 DGGQSQRTFIYI-KDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320 (390)
Q Consensus 254 ~~~~~~~~~i~v-~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~~s~~~l~~~i~~~~g~~~~~~~~~~ 320 (390)
.+++..++++++ +|+++++..++..+ +...+++|++++ +.+|+.|+++++.+.+|++.....+|.
T Consensus 179 ~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g--~~~T~~eia~~l~~~~G~~v~~~~vp~ 245 (350)
T d1xgka_ 179 FDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF--ETLSPVQVCAAFSRALNRRVTYVQVPK 245 (350)
T ss_dssp SCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred ccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC--CcCCHHHHHHHHHHHHCCcceEEECCH
Confidence 566778889986 79999999999764 224578999988 379999999999999998766555543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=6.7e-19 Score=153.16 Aligned_cols=215 Identities=16% Similarity=0.115 Sum_probs=157.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||++-||..+++.|.++ |++|++++|+++..+...+. -++..+.+|++|+++++++++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~-G~~V~~~~r~~~~l~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEA------VGAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT------TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH------cCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999 99999999998776655442 367889999999999988775
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|++||+||........ ++....+++|+.++..+.+++. +.+ ..++++||....+..
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~------------ 143 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------ 143 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC------------
Confidence 389999999987543222 2345677799999888877653 334 567777775432221
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... .
T Consensus 144 ----------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-------------~ 188 (242)
T d1ulsa_ 144 ----------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-------------K 188 (242)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-------------S
T ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh-------------c
Confidence 2347999999999988887654 4799999999999766433 1
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.............|+.. +...+|+|+++..++... ....|+.+.|.+|
T Consensus 189 ~~~~~~~~~~~~~pl~R---------~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 237 (242)
T d1ulsa_ 189 VPEKVREKAIAATPLGR---------AGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237 (242)
T ss_dssp SCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHHHhchhhCCCCCcEEEECCC
Confidence 12223334444443322 445899999999988643 2247889999886
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.81 E-value=3.5e-19 Score=154.40 Aligned_cols=212 Identities=13% Similarity=0.121 Sum_probs=152.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.++++|++|||||++-||+.+++.|.++ |++|++++|+.... +.+..+.+|++|+++++++++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~ 69 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAP------------KGLFGVEVDVTDSDAVDRAFTAVEE 69 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCC------------TTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcchh------------cCceEEEEecCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999 99999999986532 366778999999998887775
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHH----HHhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKY----CSENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||........ ++....+++|+.++..+.++ +++.+ .++|++||........
T Consensus 70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~--------- 140 (237)
T d1uzma1 70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG--------- 140 (237)
T ss_dssp HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--------------
T ss_pred hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc---------
Confidence 389999999987543222 34456778999998776654 34555 7999999975432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +|+++..+.|+.+..+...
T Consensus 141 ------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~------------ 184 (237)
T d1uzma1 141 ------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR------------ 184 (237)
T ss_dssp ------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------------
T ss_pred ------------------------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh------------
Confidence 2237999999999988887654 4799999999988654221
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.+-...........|+. -+...+|+|+++..++... +...|+++.+.+|
T Consensus 185 -~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 185 -ALDERIQQGALQFIPAK---------RVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp -HSCHHHHHHHGGGCTTC---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -ccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 11122223333332221 2556899999999988643 2256889999885
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=3.1e-19 Score=155.85 Aligned_cols=226 Identities=14% Similarity=0.126 Sum_probs=160.2
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-- 89 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-- 89 (390)
++++++|++|||||++-||+++++.|.++ |++|++++|+++..+.+.+. ..++.++.+|++|+++++++++.
T Consensus 1 g~rl~GK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~-----~~~~~~~~~Dvs~~~~v~~~~~~~~ 74 (250)
T d1ydea1 1 GTRYAGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQE-----LPGAVFILCDVTQEDDVKTLVSETI 74 (250)
T ss_dssp CCTTTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHh-----cCCCeEEEccCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999 99999999988776655443 35788999999999998887763
Q ss_pred -----ccEEEEeccccCCcc-cc----CChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecccccccccCCCCCCCC
Q 016370 90 -----ADLTINLAAICTPAD-YN----TRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 90 -----~d~Vih~a~~~~~~~-~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
+|++||+||...... .. ++....+++|+.++..+++++. +.+.++|++||........
T Consensus 75 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~-------- 146 (250)
T d1ydea1 75 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-------- 146 (250)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT--------
T ss_pred HhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc--------
Confidence 899999999764221 11 2345677899999888877653 3336999999975432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.|..... ...
T Consensus 147 -------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~------~~~ 195 (250)
T d1ydea1 147 -------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL------AAL 195 (250)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH------HTT
T ss_pred -------------------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHH------hhc
Confidence 2237999999999998887654 479999999998854321000 000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
. .-....+.......|+ .-+...+|+|++++.++.......|+++.|.+|
T Consensus 196 ~-~~~~~~~~~~~~~~pl---------~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG 245 (250)
T d1ydea1 196 M-PDPRASIREGMLAQPL---------GRMGQPAEVGAAAVFLASEANFCTGIELLVTGG 245 (250)
T ss_dssp S-SSHHHHHHHHHHTSTT---------SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred C-CCHHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCccCCCcCCeEEECCC
Confidence 0 0011122222222232 125569999999999885434457899999886
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=2.6e-19 Score=155.84 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=159.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||++-||+++++.|.++ |++|++.+|+++..+.+.+.. ..+...+.+|++|+++++++++
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~-G~~Vv~~~r~~~~l~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYL----GANGKGLMLNVTDPASIESVLEKIRAEF 76 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh----CCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence 67899999999999999999999999 999999999987766554322 2467889999999998887776
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|++||+|+........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------- 145 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG----------- 145 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----------
Confidence 389999999987543332 234456778999988887766 3444 7899999976443221
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... .
T Consensus 146 ----------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~-------------~ 190 (243)
T d1q7ba_ 146 ----------------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR-------------A 190 (243)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------------T
T ss_pred ----------------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh-------------h
Confidence 2237999999999998887654 4899999999988544221 1
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
+.......+....|+ .-+...+|+|+++..++.... ...|+.+.+.+|
T Consensus 191 ~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG 239 (243)
T d1q7ba_ 191 LSDDQRAGILAQVPA---------GRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 239 (243)
T ss_dssp SCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhhHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 122223333333332 125569999999999986432 257899999886
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.80 E-value=5.6e-19 Score=153.59 Aligned_cols=214 Identities=15% Similarity=0.196 Sum_probs=158.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
++++|++|||||++-||+++++.|.++ |++|++.+|+++..+.+.+. ....+.++.+|++|+++++++++.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAE----LADAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----TGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----hhCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999998776655433 235788999999999988877753
Q ss_pred ---ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 ---ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 ---~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|++||+||........ ++....+++|+.++..+.+++ ++.+ .++|++||...+....
T Consensus 78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------- 147 (244)
T d1nffa_ 78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV---------- 147 (244)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc----------
Confidence 89999999987543222 234567778999988887654 3333 6899999976543221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|+++..+-|+.+-.|..... .
T Consensus 148 -----------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~----------~ 194 (244)
T d1nffa_ 148 -----------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV----------P 194 (244)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS----------C
T ss_pred -----------------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh----------h
Confidence 2237999999999999888754 479999999998876543210 0
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
...... ...-+...+|+|++++.++... ....|+++.|.+|
T Consensus 195 --------~~~~~~---------pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG 236 (244)
T d1nffa_ 195 --------EDIFQT---------ALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 236 (244)
T ss_dssp --------TTCSCC---------SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --------HHHHhc---------cccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence 000111 1122678999999999988643 2357889999886
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.80 E-value=1.1e-18 Score=152.62 Aligned_cols=224 Identities=14% Similarity=0.147 Sum_probs=159.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||+.+++.|.++ |++|++++|+.+...............++..+.+|++|+++++++++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999 99999999987765544332222224568889999999998888775
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|++||+||........ ++....+++|+.++..+.+++ ++.+ .++|++||........
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~---------- 150 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM---------- 150 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC----------
Confidence 389999999987543222 244556778999988877654 3444 7999999854311100
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+...
T Consensus 151 ----------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~------------- 195 (251)
T d1vl8a_ 151 ----------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE------------- 195 (251)
T ss_dssp ----------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-------------
T ss_pred ----------------------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH-------------
Confidence 02237999999999998888654 4799999999998766432
Q ss_pred hhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... ......+....|+.- +...+|+|++++.++... ....|+++.|.+|
T Consensus 196 ~~~~~~~~~~~~~~~~pl~R---------~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG 247 (251)
T d1vl8a_ 196 AVFSDPEKLDYMLKRIPLGR---------TGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 247 (251)
T ss_dssp HHHTCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hccCCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence 111 122333344433321 345789999999888643 2246889999886
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.80 E-value=1.1e-18 Score=152.62 Aligned_cols=222 Identities=12% Similarity=0.134 Sum_probs=160.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|.+|||||++-||+++++.|.++ |++|++++|+.+....+.+.... ....+..+.+|++|+++++++++
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 84 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKS-FGYESSGYAGDVSKKEEISEVINKILTE 84 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHT-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999 99999999987766544332211 23578899999999998888776
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+|+........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~---------- 154 (251)
T d2c07a1 85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV---------- 154 (251)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC----------
Confidence 389999999987543322 344567778999988777654 3444 7999999975432221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+...
T Consensus 155 -----------------------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~------------- 198 (251)
T d2c07a1 155 -----------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD------------- 198 (251)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------
T ss_pred -----------------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc-------------
Confidence 2237999999999999888654 4799999999999776433
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+.......+....|+. -+...+|+|+++..++.... ...|+++.|.+|
T Consensus 199 ~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 199 KISEQIKKNIISNIPAG---------RMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp -CCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 12233444444444331 15568999999998886432 246889999886
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.6e-18 Score=150.94 Aligned_cols=219 Identities=15% Similarity=0.180 Sum_probs=159.7
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---cc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---AD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~d 91 (390)
+++|++|||||++-||.++++.|.++ |++|++++|+.+....+.+. ..++..+.+|++|.++++++++. +|
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~g~iD 78 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRE-----CPGIEPVCVDLGDWEATERALGSVGPVD 78 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHh-----cCCCeEEEEeCCCHHHHHHHHHHhCCce
Confidence 68899999999999999999999999 99999999998776655432 24688999999999999988875 89
Q ss_pred EEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH-----hCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS-----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~-----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
++||+|+........ ++....+++|+.++..+.+++. +.+ .++|++||........
T Consensus 79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-------------- 144 (244)
T d1pr9a_ 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-------------- 144 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc--------------
Confidence 999999987543322 3444567789998887776543 223 6899999976433221
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+..|.... .... .
T Consensus 145 -------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~---------~~~~--~ 194 (244)
T d1pr9a_ 145 -------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA---------TWSD--P 194 (244)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHT---------TSCS--H
T ss_pred -------------------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhh---------hccC--h
Confidence 2237999999999999888754 47999999999887653210 0000 1
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
..........|+ .-+...+|+|+++..++... ....|+++.|.+|
T Consensus 195 ~~~~~~~~~~pl---------~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 195 HKAKTMLNRIPL---------GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHTTCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence 122333333332 12566999999999888643 2257889999886
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.80 E-value=1.1e-18 Score=152.37 Aligned_cols=222 Identities=12% Similarity=0.086 Sum_probs=154.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||.++++.|.++ |++|++.+|+++..+.... .+..++.+|++|.++++++++
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 73 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEA-------IGGAFFQVDLEDERERVRFVEEAAYA 73 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHH-------HTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-------cCCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999 9999999998765443222 255788999999988887775
Q ss_pred --cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|++||+||...+....+ +....+++|+.++.++.+++ ++.+ .++|++||...+....
T Consensus 74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~---------- 143 (248)
T d2d1ya1 74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ---------- 143 (248)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT----------
T ss_pred cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc----------
Confidence 3899999999875433322 34457779999988887766 3444 7999999976543321
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|..... ....
T Consensus 144 -----------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~-------~~~~ 193 (248)
T d2d1ya1 144 -----------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA-------IALS 193 (248)
T ss_dssp -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH-------HC--
T ss_pred -----------------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHH-------hhcC
Confidence 2337999999999988887655 479999999988754421000 0000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.....+........| ..-+...+|+|+++..++... +...|+.+.|.+|
T Consensus 194 ~~~~~~~~~~~~~~p---------l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 243 (248)
T d2d1ya1 194 PDPERTRRDWEDLHA---------LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG 243 (248)
T ss_dssp ------CHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence 000001111111111 123567999999999988643 2257889999886
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=8.9e-19 Score=152.38 Aligned_cols=219 Identities=18% Similarity=0.194 Sum_probs=158.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---cc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---AD 91 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---~d 91 (390)
+++|++|||||++-||+.+++.|.++ |++|++++|+++....+.+. ..++..+.+|++|.+++++++++ +|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKE-----CPGIEPVCVDLGDWDATEKALGGIGPVD 76 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHh-----cCCCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence 57899999999999999999999999 99999999998776655432 35788999999999999999885 89
Q ss_pred EEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh-----CC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE-----NN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~-----~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
++||+||........ ++....+++|+.++..+.+++.. .. .++|++||...+....
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------- 142 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-------------- 142 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC--------------
Confidence 999999987543222 23445677899998888775532 22 6899999975433221
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+ +|+++..+-||.+-.|.... . ..-.
T Consensus 143 -------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~----------~-~~~~ 192 (242)
T d1cyda_ 143 -------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK----------V-SADP 192 (242)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH----------H-TCCH
T ss_pred -------------------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHh----------h-cCCH
Confidence 2237999999999999888755 47999999999886542110 0 0001
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.+...+....|+ .-+...+|+|+++..++... ....|+++.|.+|
T Consensus 193 ~~~~~~~~~~pl---------~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 193 EFARKLKERHPL---------RKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG 238 (242)
T ss_dssp HHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred HHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence 222233332222 12556899999999988643 2357889999886
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=1e-18 Score=153.16 Aligned_cols=223 Identities=16% Similarity=0.232 Sum_probs=160.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||++-||.+++++|.++ |++|++.+|+++....+.+.... ....+.++.+|++|+++++++++
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~-~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 468899999999999999999999999 99999999987765554332221 23578899999999998887765
Q ss_pred --cccEEEEeccccCCcccc---CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|++||+||........ ++....+++|+.++..+.+++ ++.+ .++|++||...+....
T Consensus 86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~----------- 154 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI----------- 154 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------
T ss_pred cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccc-----------
Confidence 389999999987543322 234456778999988877655 3334 6899999865443221
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+ +|+++..+-||.+-.+... . .
T Consensus 155 ----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~---------~---~ 200 (255)
T d1fmca_ 155 ----------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---------S---V 200 (255)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH---------T---T
T ss_pred ----------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh---------c---c
Confidence 2247999999999999888755 4799999999988655321 0 0
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
+-...........|+. -+...+|+|++++.++... +...|+++.+.+|
T Consensus 201 ~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG 249 (255)
T d1fmca_ 201 ITPEIEQKMLQHTPIR---------RLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249 (255)
T ss_dssp CCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence 1122333333333332 1456899999999988643 2257889999987
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.79 E-value=1.6e-18 Score=152.15 Aligned_cols=233 Identities=12% Similarity=0.132 Sum_probs=159.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
++++|++|||||++-||+.+++.|.++ |++|++.+|+++........... ....++..+.+|++|++++++++.
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 79 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 79 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999 99999999988765443322111 123468889999999999887775
Q ss_pred ---cccEEEEeccccCCcc-----ccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||+||...... ..++....+++|+.++..+.+++ ++.+ .++|++||...+....
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-------- 151 (258)
T d1iy8a_ 80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG-------- 151 (258)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS--------
T ss_pred HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC--------
Confidence 3899999999764321 12344567789999998888765 3333 7899999976432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+..|...... ...
T Consensus 152 -------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~-----~~~ 201 (258)
T d1iy8a_ 152 -------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-----KQL 201 (258)
T ss_dssp -------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-----HHH
T ss_pred -------------------------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHH-----hhc
Confidence 2247999999999888887654 4799999999988654211000 000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCCCCc
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNE 295 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~~~~ 295 (390)
...........+....|+ .-+...+|+|++++.++... +...|+++.|.+| ..
T Consensus 202 ~~~~~~~~~~~~~~~~pl---------~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG-~s 255 (258)
T d1iy8a_ 202 DPENPRKAAEEFIQVNPS---------KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG-QS 255 (258)
T ss_dssp CTTCHHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT-TT
T ss_pred CcccHHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcc-hh
Confidence 000011222233333232 12556899999999988643 2257889999987 44
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.79 E-value=3.4e-18 Score=149.44 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=156.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||.+++++|.++ |++|++.+|+++....+.+. ....+.++.+|++++++++++++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARE----LGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----TGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----hCCceEEEEcccCCHHHHHHHHHHHHHH
Confidence 368899999999999999999999999 99999999988776655443 23578899999999999988775
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~---------- 146 (254)
T d1hdca_ 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA---------- 146 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc----------
Confidence 389999999987543322 234456778999988887765 3444 7999999976432221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|+++.++-||.+..|
T Consensus 147 -----------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~---------------- 187 (254)
T d1hdca_ 147 -----------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP---------------- 187 (254)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH----------------
T ss_pred -----------------------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc----------------
Confidence 2347999999999999888754 4799999999988543
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
+........... ....-...|--...+|+|++++.++... +...|+++.|.+|
T Consensus 188 -~~~~~~~~~~~~----~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG 241 (254)
T d1hdca_ 188 -MTAETGIRQGEG----NYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp -HHHHHTCCCSTT----SCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -cchhcCHHHHHH----HHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence 211111000000 0000000111134799999999988543 2257899999986
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.79 E-value=2.9e-18 Score=150.69 Aligned_cols=222 Identities=13% Similarity=0.102 Sum_probs=156.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
.+++|++|||||++-||.++++.|.++ |++|++.+|+... .+.+.+... .....+..+.+|++|+++++++++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIK-KVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999 9999999998643 322222111 123568889999999998888775
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC--CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN--KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
++|++||+||...+.... ++....+++|+.++..+.+++ .+.+ .++|++||...+....
T Consensus 82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~-------- 153 (261)
T d1geea_ 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP-------- 153 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------
T ss_pred HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc--------
Confidence 389999999987543322 234456778999988776654 3444 4588999865432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+ +|+++.++.|+.+-.|...
T Consensus 154 -------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----------- 197 (261)
T d1geea_ 154 -------------------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----------- 197 (261)
T ss_dssp -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH-----------
T ss_pred -------------------------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh-----------
Confidence 1237999999999988887654 4799999999998655321
Q ss_pred chhhH--HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 233 VPRVL--ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... ......+....|+. -+...+|+|++++.++... ....|+.+.|.+|
T Consensus 198 --~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 249 (261)
T d1geea_ 198 --EKFADPEQRADVESMIPMG---------YIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp --HHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --hhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 111 12222333333321 2456899999999988543 2257899999986
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.78 E-value=3.8e-18 Score=149.20 Aligned_cols=222 Identities=15% Similarity=0.112 Sum_probs=157.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||++-||+++++.|.++ |++|++.+|+++..+...+.... ..++.++.+|++|+++++++++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999988766554433221 3578999999999998887776
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC--CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN--KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~--------- 150 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------- 150 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---------
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC---------
Confidence 389999999987543322 234457779999988887765 3444 4789999965432210
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh-----hcCccEEEeecceecCCCCCCCCCCCCCCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA-----ENGLEFTIVRPFNWIGPRMDFIPGIDGPSE 231 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 231 (390)
....|+.+|...+.+.+.++. .+|+++..+.||.+-.|....
T Consensus 151 ------------------------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~--------- 197 (251)
T d1zk4a1 151 ------------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD--------- 197 (251)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT---------
T ss_pred ------------------------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHh---------
Confidence 123799999999988876653 458999999999886543210
Q ss_pred CchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 232 GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
. .-...........|+ .-+...+|+|++++.++.... ...|+.+.|.+|
T Consensus 198 -~--~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 198 -L--PGAEEAMSQRTKTPM---------GHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp -S--TTHHHHHTSTTTCTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -c--CCHHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence 0 001111111111111 125679999999999886432 246889999886
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.78 E-value=1.2e-17 Score=147.64 Aligned_cols=227 Identities=14% Similarity=0.183 Sum_probs=158.2
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||++-||..+++.|.++ |++|++++|+.+..+...+.... ...+.++.+|++|+++++++++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcC--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 688999999999999999999999999 99999999988766554332221 3467889999999999988875
Q ss_pred --cccEEEEeccccCCcc--c-c---CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 --MADLTINLAAICTPAD--Y-N---TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~--~-~---~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||+||...... . . ++....+++|+.++..+.+++ .+.+ .++|++||...+....
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~-------- 151 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE-------- 151 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc--------
Confidence 3899999999764321 1 1 234456778999988777655 3344 6899998865432211
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|..... ...
T Consensus 152 ------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~~ 201 (268)
T d2bgka1 152 ------------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV------FGV 201 (268)
T ss_dssp ------------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS------SSC
T ss_pred ------------------------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhh------hcC
Confidence 01226999999999998887654 489999999999987754310 000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.......+.. ....+ ..-+...+|+|++++.++... ....|+++.|.+|
T Consensus 202 ~~~~~~~~~~---~~~~~--------~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG 251 (268)
T d2bgka1 202 DSSRVEELAH---QAANL--------KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG 251 (268)
T ss_dssp CHHHHHHHHH---HTCSS--------CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHH---hcccc--------CCCCcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence 1111111111 11110 112556899999999988643 2357899999987
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.78 E-value=3.2e-18 Score=150.74 Aligned_cols=231 Identities=13% Similarity=0.165 Sum_probs=153.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh-hhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
+++|++|||||++-||.+++++|.++ |++|++.+|++. ..+.+..........++.++.+|++|+++++++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999 999999999753 23322221111124578899999999999988876
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~---------- 150 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA---------- 150 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccC----------
Confidence 389999999987543322 344567778999987776654 4444 7999999976433211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|...
T Consensus 151 -----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~------------- 194 (260)
T d1x1ta1 151 -----------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE------------- 194 (260)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred -----------------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhh-------------
Confidence 2237999999999998888655 4799999999988665322
Q ss_pred hhHHHHHHHHhcCCCe---EEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPL---KLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
..+............. .......+..-+...+|+|++++.++... ....|+++.+.+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 195 KQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp --------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 0111000000000000 00000011123567999999999988643 2357889999886
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.77 E-value=4.7e-18 Score=149.15 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=158.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM----- 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~----- 89 (390)
+++|++|||||++-||+++++.|.++ |++|++.+|+.+..+.+... ...++..+.+|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~----~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAE----IGPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHT-TEEEEEEESCHHHHHHHHHH----HCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----hCCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999 99999999988766655443 235788999999999999887763
Q ss_pred --ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----h-CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----E-NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~-~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
+|++||+||........ ++....+++|+.++..+.+++. + .. .++|++||...+....
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------- 147 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA---------- 147 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc----------
Confidence 89999999987543222 3345677899999888876532 2 22 6899999976432211
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|...
T Consensus 148 -----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~------------- 191 (256)
T d1k2wa_ 148 -----------------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD------------- 191 (256)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH-------------
T ss_pred -----------------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh-------------
Confidence 2237999999999998887644 4899999999988665321
Q ss_pred hhHHHHH-----------HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCCCCcc
Q 016370 235 RVLACFS-----------NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296 (390)
Q Consensus 235 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~~~~~ 296 (390)
.+...+. ..+....|+ .-+...+|+|.+++.++.... ...|+.+.|.+| ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG-~~m 255 (256)
T d1k2wa_ 192 GVDAKFADYENLPRGEKKRQVGAAVPF---------GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG-NWM 255 (256)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHSTT---------SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT-SSC
T ss_pred hhhhhhhhhccCChHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhCCccCceEEECcc-hhh
Confidence 1111111 111111111 125568999999998875432 246899999987 444
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.77 E-value=5.2e-18 Score=149.05 Aligned_cols=227 Identities=14% Similarity=0.087 Sum_probs=159.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||+++++.|.++ |++|++.+|+++..+........ ....+.++.+|++|+++++++++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRS-KGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999 99999999988766554433221 23567889999999988877654
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||........ ++....+++|+.++..+.+++ ++.+ .++|++||........
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------- 153 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP--------- 153 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT---------
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc---------
Confidence 279999999987543222 234457789999988777655 3444 7899999975432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|.... ...
T Consensus 154 ------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~--------~~~ 201 (259)
T d2ae2a_ 154 ------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM--------TIQ 201 (259)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH--------HTT
T ss_pred ------------------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHh--------hhh
Confidence 2237999999999999888755 47999999999886542110 000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
..........+....|+.- +...+|+|++++.++.... ...|+.+.|.+|
T Consensus 202 ~~~~~~~~~~~~~~~pl~R---------~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 252 (259)
T d2ae2a_ 202 DPEQKENLNKLIDRCALRR---------MGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 252 (259)
T ss_dssp SHHHHHHHHHHHHTSTTCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chhhHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 0111223334444444321 4558999999999886432 247889999886
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.77 E-value=4.3e-18 Score=147.93 Aligned_cols=218 Identities=15% Similarity=0.092 Sum_probs=157.5
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||++-||..++++|.++ |++|++.+|+.+........ ...++.++++|++++++++++++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dls~~~~i~~~~~~i~~~ 76 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAA----LEAEAIAVVADVSDPKAVEAVFAEALEE 76 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----CCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999998776554432 24578889999999999987776
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
++|++||+|+........ ++....+++|+.+...+.+++...- ..++.+||.+.....
T Consensus 77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~------------- 143 (241)
T d2a4ka1 77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------------- 143 (241)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-------------
T ss_pred hCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc-------------
Confidence 389999999887543222 2334567789999999888765443 444544443321110
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhh
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~ 236 (390)
....|+.+|...|.+.+.++++. |+++.++.||.+-.+... .+
T Consensus 144 ---------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~-------------~~ 189 (241)
T d2a4ka1 144 ---------------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-------------GL 189 (241)
T ss_dssp ---------------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-------------TS
T ss_pred ---------------------CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH-------------hh
Confidence 12369999999999999987665 699999999988544322 12
Q ss_pred HHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.........+..|+. -+...+|+|+++..++... +...|+++.+.+|
T Consensus 190 ~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG 237 (241)
T d2a4ka1 190 PPWAWEQEVGASPLG---------RAGRPEEVAQAALFLLSEESAYITGQALYVDGG 237 (241)
T ss_dssp CHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred hHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhcchhCCCcCceEEeCCC
Confidence 233334444443332 2556999999999998643 2357889999886
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.77 E-value=1.2e-17 Score=145.76 Aligned_cols=221 Identities=15% Similarity=0.153 Sum_probs=151.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
++++|.+|||||++-||+.+++.|.++ |++|++.+|++.... ...+ ....++..+.+|++|+++++++++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~----~~g~~~~~~~~Dvs~~~~v~~~~~~~~~ 76 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIR----NLGRRVLTVKCDVSQPGDVEAFGKQVIS 76 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHH----HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHH----HcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999 999999999764321 1111 124678899999999999988765
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
++|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||........
T Consensus 77 ~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~--------- 147 (247)
T d2ew8a1 77 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE--------- 147 (247)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS---------
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc---------
Confidence 389999999987543222 345567778999988877755 4444 7899999975432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|....
T Consensus 148 ------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~----------- 192 (247)
T d2ew8a1 148 ------------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA----------- 192 (247)
T ss_dssp ------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------
T ss_pred ------------------------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccc-----------
Confidence 2237999999999888887654 47999999999887654320
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
............. .....-+...+|+|++++.++... +...|+++.|.+|
T Consensus 193 -~~~~~~~~~~~~~--------~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 193 -SALSAMFDVLPNM--------LQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 243 (247)
T ss_dssp ------------CT--------TSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred -cccchhHHHHHHH--------hccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 0000000111000 011112456899999999988643 2247889999886
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.77 E-value=8.7e-18 Score=147.44 Aligned_cols=228 Identities=12% Similarity=0.100 Sum_probs=157.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|+||||||++-||++++++|+++ |++|++++|++...+...+.... ....+.++.+|+++.++++++++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~-G~~V~i~~r~~~~l~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWRE-KGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999 99999999998665544332211 23567889999999998877664
Q ss_pred --c-ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --M-ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~-~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+ +|++||+|+........ ++....+++|+.++..+.+++. +.+ .++|++||........
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~--------- 151 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP--------- 151 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT---------
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc---------
Confidence 2 89999999987543222 3455677789999888877653 333 7999999976543221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.+++++ |+++.++.||.+..|...... ...
T Consensus 152 ------------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---~~~--- 201 (258)
T d1ae1a_ 152 ------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKN--- 201 (258)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------
T ss_pred ------------------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhh---hhh---
Confidence 22379999999999998887654 799999999999776432000 000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.........+....|. .-+...+|+|+++..++... ....|+.+.|.+|
T Consensus 202 -~~~~~~~~~~~~~~pl---------gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 202 -PHQKEEIDNFIVKTPM---------GRAGKPQEVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp ---CHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 0011222333322222 11567999999999998542 2247888999886
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.77 E-value=5e-18 Score=148.56 Aligned_cols=219 Identities=14% Similarity=0.164 Sum_probs=155.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++++|++|||||++-||..+++.|.++ |++|++.+|+++..+.+.+. ...+..++.+|++|.++++++++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAE----LGERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH----HCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----hCCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999 99999999988766554432 23577889999999988887776
Q ss_pred --cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCCCcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
.+|++||+||...+.... ++....+++|+.++..+++++ ++.+.++|++||...+....
T Consensus 78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~----------- 146 (253)
T d1hxha_ 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE----------- 146 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT-----------
T ss_pred hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc-----------
Confidence 389999999987543222 234567789999888776655 33447899999975432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +++++..+-||.+-.|..
T Consensus 147 ----------------------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~------------- 191 (253)
T d1hxha_ 147 ----------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM------------- 191 (253)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH-------------
T ss_pred ----------------------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhH-------------
Confidence 2347999999999888877644 358999999998865421
Q ss_pred hhhHHHHH-----HHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVLACFS-----NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.... ........ .-...-.+...+|+|++++.++... +...|+.++|.+|
T Consensus 192 ----~~~~~~~~~~~~~~~~~-----~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 192 ----QASLPKGVSKEMVLHDP-----KLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp ----HHHSCTTCCHHHHBCBT-----TTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred ----HhhCcchhhHHHHHhCc-----cccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 1000 00011100 0011113677899999999988643 2257889999885
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.77 E-value=5.8e-18 Score=148.90 Aligned_cols=236 Identities=14% Similarity=0.112 Sum_probs=158.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
+++++|++|||||++-||..+++.|.++ |++|++++|+++..+.+...... ...++..+.+|++|+++++++++
T Consensus 1 krL~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T d1zema1 1 KKFNGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEAVIGTVDSVVR 78 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHT-TTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3688999999999999999999999999 99999999988766554432222 24578899999999988887775
Q ss_pred ---cccEEEEeccccCC-ccc----cCChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCC
Q 016370 89 ---MADLTINLAAICTP-ADY----NTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDS 155 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~-~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~ 155 (390)
.+|++||+||.... ... .++....+++|+.++..+.+++. +.+ .++|++||...+....
T Consensus 79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-------- 150 (260)
T d1zema1 79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP-------- 150 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT--------
T ss_pred HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc--------
Confidence 38999999997643 212 22345677789999888877653 333 7999999976543221
Q ss_pred CCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCC---CCCC
Q 016370 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPG---IDGP 229 (390)
Q Consensus 156 ~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~---~~~~ 229 (390)
....|+.+|...+.+.+.++.+. |+++..+.||.|-.+....... ....
T Consensus 151 -------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~ 205 (260)
T d1zema1 151 -------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVG 205 (260)
T ss_dssp -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHT
T ss_pred -------------------------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhc
Confidence 12379999999999988876554 7999999999886542100000 0000
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
..........+...+....|+. -+...+|+|.+++.++... ....|+++.|.+|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 206 SQYFSTDPKVVAQQMIGSVPMR---------RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp CTTSCSSHHHHHHHHHHTSTTS---------SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred ccccccCHHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 0000001112222333333321 1445789999999988643 2246788888764
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.76 E-value=3e-18 Score=150.88 Aligned_cols=229 Identities=11% Similarity=0.068 Sum_probs=157.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||++-||.++++.|.++ |++|++++|+.+......+........++..+.+|++|+++++++++
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999 99999999998765544332222224578899999999999888775
Q ss_pred -cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH-----hCC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS-----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~-----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
.+|++||+|+........ ++....+++|+.++..+.+++. +.. ..++..|+...+......... .
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~--~-- 161 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG--S-- 161 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE--E--
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccccc--C--
Confidence 389999999987543222 2344577799998887766542 223 566666665443222110000 0
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
.....|+.+|...+.+.+.++.+ +|+++.++.||.+-.+...
T Consensus 162 ----------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~------------- 206 (260)
T d1h5qa_ 162 ----------------------LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA------------- 206 (260)
T ss_dssp ----------------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-------------
T ss_pred ----------------------ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh-------------
Confidence 02347999999999998887654 5799999999998655332
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+........|+.. +...+|+|++++.++.... ...|+.+.|.+|
T Consensus 207 ~~~~~~~~~~~~~~pl~R---------~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 256 (260)
T d1h5qa_ 207 HMDKKIRDHQASNIPLNR---------FAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 256 (260)
T ss_dssp GSCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred ccCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence 122333344444433321 4458899999998885432 247889999986
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=7e-18 Score=148.14 Aligned_cols=222 Identities=16% Similarity=0.123 Sum_probs=144.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.+++|++|||||++-||..+++.|.++ |++|++++|+++........... ....+..+.+|++++++++++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNECLSKWQK-KGFQVTGSVCDASLRPEREKLMQTVSSM 82 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999 99999999988766554332222 23478899999999988776663
Q ss_pred --c-ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 --M-ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 --~-~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
+ +|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||........
T Consensus 83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~--------- 153 (259)
T d1xq1a_ 83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS--------- 153 (259)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccc---------
Confidence 2 89999999987543222 344567789999988877755 3444 7999999965432211
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +|+++.++-||.+-.|...
T Consensus 154 ------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~------------ 197 (259)
T d1xq1a_ 154 ------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE------------ 197 (259)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------
T ss_pred ------------------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh------------
Confidence 2237999999999988887654 4799999999988665432
Q ss_pred hhhH-HHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 234 PRVL-ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 234 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
... ...........|+ .-+...+|+|.+++.++... ....|+.+.|.+|
T Consensus 198 -~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG 248 (259)
T d1xq1a_ 198 -AVYDDEFKKVVISRKPL---------GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 248 (259)
T ss_dssp ------------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred -hhchHHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCC
Confidence 011 1111111122222 12456889999999888542 2246788888886
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=8.6e-19 Score=153.82 Aligned_cols=231 Identities=14% Similarity=0.149 Sum_probs=155.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
++||++|||||++-||.++++.|.++ |++|++++|+.+............ ...++.++.+|++|+++++++++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999 999999999887655443222111 23478889999999998888775
Q ss_pred --cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHH----hCC----CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS----ENN----KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~----~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|++||+|+.... .+..+.+++|+.++..+..++. +.. .++|++||...+-...
T Consensus 80 ~G~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~----------- 144 (254)
T d2gdza1 80 FGRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------- 144 (254)
T ss_dssp HSCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------
T ss_pred cCCcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC-----------
Confidence 38999999998743 4566788899988777665552 221 4599999976432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHH--Hh---hhcCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA--EG---AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~--~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+. ++ ..+|+++..+.||.+-.|..... +....
T Consensus 145 ----------------------~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~-----~~~~~ 197 (254)
T d2gdza1 145 ----------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI-----EKEEN 197 (254)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG-----GCHHH
T ss_pred ----------------------CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhc-----ccccc
Confidence 223799999999988763 22 35689999999998854321100 00000
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCCCCcccHH
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVR 299 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~~~~~s~~ 299 (390)
..........+....| ..-+...+|+|++++.++.+.. ..|+++.|.+| ..+.++
T Consensus 198 ~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~~-itG~~i~VdGG-~~~~~~ 252 (254)
T d2gdza1 198 MGQYIEYKDHIKDMIK---------YYGILDPPLIANGLITLIEDDA-LNGAIMKITTS-KGIHFQ 252 (254)
T ss_dssp HGGGGGGHHHHHHHHH---------HHCCBCHHHHHHHHHHHHHCTT-CSSCEEEEETT-TEEEEC
T ss_pred ccccHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHHcCCC-CCCCEEEECCC-Ceeecc
Confidence 0000000011111001 1124568999999999998754 68899999987 665544
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.76 E-value=1.5e-17 Score=146.01 Aligned_cols=231 Identities=15% Similarity=0.140 Sum_probs=158.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
++|.+|||||++-||..+++.|.++ |++|++.+|+++..+...+.... ....+.++.+|++|+++++++++
T Consensus 1 DgKValITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g 78 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELRE-AGVEADGRTCDVRSVPEIEALVAAVVERYG 78 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 4688899999999999999999999 99999999987766554332221 24578899999999999888776
Q ss_pred cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh------CC-CcEEEeecccccccccCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE------NN-KRLIHFSTCEVYGKTIGSFLPKDSPL 157 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~------~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~ 157 (390)
++|++||+||........ ++....+++|+.++..+++++.. .+ .++|++||...+....
T Consensus 79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~---------- 148 (257)
T d2rhca1 79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---------- 148 (257)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT----------
T ss_pred CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc----------
Confidence 389999999987543222 23456778999999999987743 23 6899998875433221
Q ss_pred CCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 158 RQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 158 ~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.+|...+.+.+.++.+. |+++..+.||.+-.|........ ......
T Consensus 149 -----------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~ 203 (257)
T d2rhca1 149 -----------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH--YSDIWE 203 (257)
T ss_dssp -----------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHH--HHHHTT
T ss_pred -----------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhh--hhhhcc
Confidence 22379999999999998887664 68999999988854321100000 000000
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.........+....|+. -+...+|+|++++.++... +...|+.+.|.+|
T Consensus 204 ~~~~e~~~~~~~~~Plg---------R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 204 VSTEEAFDRITARVPIG---------RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp CCHHHHHHHHHTTSTTS---------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cChHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 00122233333333321 2566999999999988542 2357889999886
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.76 E-value=2.1e-17 Score=145.75 Aligned_cols=233 Identities=12% Similarity=0.111 Sum_probs=150.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC--CCCCeeEEeCCCCChhHHHHhhc--
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT--GADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
+++++|.+|||||++-||+.++++|.++ |++|++++|+.+..+.+.+..... ...++.++.+|++++++++++++
T Consensus 1 ~rl~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 1 TRFAEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 4688999999999999999999999999 999999999887665443322111 12368899999999998888776
Q ss_pred -----cccEEEEeccccCCcc--------ccCChhHHHHHhhhhHHHHHHHHH----hCCCcEEEeecc-cccccccCCC
Q 016370 89 -----MADLTINLAAICTPAD--------YNTRPLDTIYSNFIDALPVVKYCS----ENNKRLIHFSTC-EVYGKTIGSF 150 (390)
Q Consensus 89 -----~~d~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~Ss~-~vy~~~~~~~ 150 (390)
++|++||+||...+.. ..++....+++|+.++..+++++. +.+.++|.++|. +.+....
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~--- 156 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP--- 156 (264)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT---
T ss_pred HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC---
Confidence 3899999999753211 112345577889999887776653 333455555553 3221110
Q ss_pred CCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCC
Q 016370 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGID 227 (390)
Q Consensus 151 ~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~ 227 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+--+......
T Consensus 157 ------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~--- 203 (264)
T d1spxa_ 157 ------------------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG--- 203 (264)
T ss_dssp ------------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------
T ss_pred ------------------------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccC---
Confidence 1236999999999988887654 4899999999998665432100
Q ss_pred CCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCC
Q 016370 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNP 292 (390)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~ 292 (390)
.+... ..-.......+....|+. -+...+|+|+++..++..+ ....|+.+.|.+|
T Consensus 204 ~~~~~-~~~~~~~~~~~~~~~Pl~---------R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG 260 (264)
T d1spxa_ 204 MPEET-SKKFYSTMATMKECVPAG---------VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 260 (264)
T ss_dssp ----------HHHHHHHHHHCTTS---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CcHHH-HHHHHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence 00000 001111122222222221 1456899999999988532 2357899999886
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.4e-17 Score=148.95 Aligned_cols=227 Identities=12% Similarity=0.108 Sum_probs=156.8
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccc----ccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE----SQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
..+++|++|||||++-||.++++.|.++ |++|++++|+.+......+.. ......++..+.+|++|+++++++++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~-Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 4589999999999999999999999999 999999999876654332211 11123578899999999999888775
Q ss_pred -------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHh----CC-CcEEEeecccccccccCCCCC
Q 016370 89 -------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
.+|++||+|+........ ++....+++|+.++..+++++.. .+ .++|++|+....+..
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~------ 160 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP------ 160 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT------
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccc------
Confidence 389999999976533222 23445777899999888876643 22 567877764322111
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.|..+...
T Consensus 161 ----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~-------- 204 (297)
T d1yxma1 161 ----------------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV-------- 204 (297)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG--------
T ss_pred ----------------------------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchh--------
Confidence 1237999999999998888755 4799999999998766421
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
......-..+........|+ .-+...+|+|.+++.++... ....|+++.|.+|
T Consensus 205 -~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG 258 (297)
T d1yxma1 205 -ENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 258 (297)
T ss_dssp -TTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hhccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence 00001111111122222221 12556899999999998643 2357899999986
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=2e-17 Score=145.43 Aligned_cols=223 Identities=11% Similarity=0.051 Sum_probs=151.6
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++|||||+| -||+.++++|.++ |++|++.+|++.......+... .......+.+|++|++++++++.
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAE--ALGGALLFRADVTQDEELDALFAGVK 81 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHH--HTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHhhh--ccCcccccccccCCHHHHHHHHHHHH
Confidence 36789999999998 6999999999999 9999988887644332221111 12456789999999998888775
Q ss_pred ----cccEEEEeccccCCc--------cccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPA--------DYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
++|++||+|+..... ....+....+++|+.++..+++++...- .++|++||........
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~------ 155 (256)
T d1ulua_ 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------ 155 (256)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------
T ss_pred HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC------
Confidence 389999999875321 1112233467789999988888775442 6899999876532221
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+ +|+++..+.|+.+..+....
T Consensus 156 ---------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~-------- 200 (256)
T d1ulua_ 156 ---------------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS-------- 200 (256)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------
T ss_pred ---------------------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccc--------
Confidence 2347999999999998888754 47999999999987664431
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
............+..|+. -+...+|+|+++..++.... ...|+.+.|.+|
T Consensus 201 ---~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 251 (256)
T d1ulua_ 201 ---IPGFTKMYDRVAQTAPLR---------RNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251 (256)
T ss_dssp ------CHHHHHHHHHHSTTS---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---hhhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhCCccCCeEEECcC
Confidence 001122333333333321 14458999999999886532 247889999886
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.74 E-value=3.1e-17 Score=145.33 Aligned_cols=232 Identities=14% Similarity=0.134 Sum_probs=156.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCC--CCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG--ADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
++++|++|||||++-||+++++.|.++ |++|++.+|+.+..+...+...... ..++..+.+|++|+++++++++
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 79 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence 468999999999999999999999999 9999999998776554433221111 2368899999999998887775
Q ss_pred ----cccEEEEeccccCCc--ccc----CChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPA--DYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~--~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|++||+||..... ... ++....+++|+.++..+.+++. +.+ .+++++||...+....
T Consensus 80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~------ 153 (274)
T d1xhla_ 80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS------ 153 (274)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT------
T ss_pred HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC------
Confidence 389999999965321 111 2345577889999887776653 344 6788888754322211
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|..... ...
T Consensus 154 ---------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~----~~~ 202 (274)
T d1xhla_ 154 ---------------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM----GLP 202 (274)
T ss_dssp ---------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT----TCC
T ss_pred ---------------------------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhh----ccc
Confidence 1237999999999988877644 489999999999865522100 000
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC--CCCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN--PARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~--~~~~~~~~~nv~~~ 292 (390)
.....-...++.......|+. -+...+|+|++++.++.. .....|+.+.|.+|
T Consensus 203 ~~~~~~~~~~~~~~~~~iPlg---------R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 203 ETASDKLYSFIGSRKECIPVG---------HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHHHHHHHHHCTTTCTTS---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred chhhHHHHHHHHHHHcCCCCC---------CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 000011112222222222221 245699999999988852 23357899999986
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.74 E-value=8.5e-17 Score=139.13 Aligned_cols=212 Identities=13% Similarity=0.168 Sum_probs=150.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC-hhHHHHhhccccEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH-DSRLEGLIKMADLT 93 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d-~~~~~~~~~~~d~V 93 (390)
+++|++|||||++-||+.+++.|.++ |++|++++|+++..+. .+.+++.+|+++ .+.+.+.+.++|++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~-Ga~V~~~~r~~~~l~~----------~~~~~~~~Dv~~~~~~~~~~~g~iD~l 70 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELLKR----------SGHRYVVCDLRKDLDLLFEKVKEVDIL 70 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHH----------TCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHh----------cCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence 57899999999999999999999999 9999999998765543 255678899986 34555556679999
Q ss_pred EEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCCcccc
Q 016370 94 INLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY 164 (390)
Q Consensus 94 ih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~ 164 (390)
||+||........ ++....+++|+.++..+++++ ++.+ .++|++||........
T Consensus 71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~----------------- 133 (234)
T d1o5ia_ 71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE----------------- 133 (234)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------------
T ss_pred EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc-----------------
Confidence 9999976543222 234456778999887776655 4444 6899999875433221
Q ss_pred ccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhH-HHH
Q 016370 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL-ACF 240 (390)
Q Consensus 165 ~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~ 240 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... ..+ ...
T Consensus 134 ----------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-------------~~~~~~~ 184 (234)
T d1o5ia_ 134 ----------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-------------ELLSEEK 184 (234)
T ss_dssp ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-------------HHSCHHH
T ss_pred ----------------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhh-------------hhcCHHH
Confidence 2337999999999888877654 4799999999988665321 111 122
Q ss_pred HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
...+....|+. -+...+|+|.++..++... +...|+++.|.+|
T Consensus 185 ~~~~~~~~pl~---------R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 228 (234)
T d1o5ia_ 185 KKQVESQIPMR---------RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG 228 (234)
T ss_dssp HHHHHTTSTTS---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhcCCCC---------CCcCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence 23333333321 2556999999999988643 2246899999886
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.74 E-value=7.7e-17 Score=141.25 Aligned_cols=217 Identities=11% Similarity=0.093 Sum_probs=152.1
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------ccc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MAD 91 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~d 91 (390)
.+|||||++-||+.+++.|.++ |++|++.+|+++..+.+.+.... ...++.++.+|++|+++++++++ ++|
T Consensus 3 ValITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQ-AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEcCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 4699999999999999999999 99999999988766554432222 23578889999999998887775 389
Q ss_pred EEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHH----hCC--CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
++||+||........ ++....+++|+.++..+++++- +.+ .++|++||...+....
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-------------- 146 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP-------------- 146 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------------
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc--------------
Confidence 999999987543222 2344577799999988877642 333 6799999865432211
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|... .+..
T Consensus 147 -------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~-------------~~~~ 194 (255)
T d1gega_ 147 -------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA-------------EIDR 194 (255)
T ss_dssp -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH-------------HHHH
T ss_pred -------------------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHh-------------hhhh
Confidence 2237999999999998887644 4899999999988543211 1111
Q ss_pred HH-----------HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 239 CF-----------SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~-----------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. ...+.+..|+ .-+...+|+|++++.++... +...|+.+.|.+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG 251 (255)
T d1gega_ 195 QVSEAAGKPLGYGTAEFAKRITL---------GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 251 (255)
T ss_dssp HHHHHHTCCTTHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred hhHhhhcccchhHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence 11 1111222221 12566999999999988643 2246889999886
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.74 E-value=1.5e-17 Score=144.66 Aligned_cols=217 Identities=15% Similarity=0.138 Sum_probs=152.9
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC-ChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------cc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MA 90 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~ 90 (390)
.||||||++-||+.++++|.++ |++|++.+++ +...+.+.+.... ...++.++.+|++|+++++++++ ++
T Consensus 3 V~lITGas~GIG~a~a~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHH-HTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999 9999887554 4333333222111 23578889999999998887775 38
Q ss_pred cEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 91 DLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
|++||+|+........ ++....+++|+.++..+.+++ ++.+ .++|++||...+-...
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-------------- 146 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-------------- 146 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--------------
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC--------------
Confidence 9999999987543222 344567778999988877655 3444 7999999976442211
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|... .+..
T Consensus 147 -------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~-------------~~~~ 194 (244)
T d1edoa_ 147 -------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA-------------KLGE 194 (244)
T ss_dssp -------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH-------------TTCH
T ss_pred -------------------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH-------------HhhH
Confidence 2237999999999999888765 4899999999888544221 1222
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC--CCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA--RANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~nv~~~ 292 (390)
..........|+. -+...+|+|+++..++.++. ...|+++.+.+|
T Consensus 195 ~~~~~~~~~~pl~---------R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 195 DMEKKILGTIPLG---------RTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHTSCTTC---------SCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHHhcCCCC---------CCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence 3334444443332 25568999999998864432 247889999886
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.74 E-value=3.5e-17 Score=144.86 Aligned_cols=232 Identities=11% Similarity=0.100 Sum_probs=153.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC--CCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT--GADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
++++|++|||||++-||+.+++.|.++ |++|++.+|+++..+...+..... ...++..+.+|++|+++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~-Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999 999999999887655443322111 12368899999999998887776
Q ss_pred ----cccEEEEeccccCCcccc----C----ChhHHHHHhhhhHHHHHHHHH----hCCCcEEEe-ecccccccccCCCC
Q 016370 89 ----MADLTINLAAICTPADYN----T----RPLDTIYSNFIDALPVVKYCS----ENNKRLIHF-STCEVYGKTIGSFL 151 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~----~----~~~~~~~~nv~~~~~l~~~~~----~~~~~~v~~-Ss~~vy~~~~~~~~ 151 (390)
++|++||+||...+.... + +....+++|+.++..+++++. +.+..+|++ ||.+......
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~---- 156 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP---- 156 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC----
T ss_pred HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCC----
Confidence 389999999987532211 1 244567789999888877653 333344444 4433221110
Q ss_pred CCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCC
Q 016370 152 PKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDG 228 (390)
Q Consensus 152 ~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~ 228 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+......
T Consensus 157 -----------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---- 203 (272)
T d1xkqa_ 157 -----------------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG---- 203 (272)
T ss_dssp -----------------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT----
T ss_pred -----------------------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccC----
Confidence 1236999999999998888754 4899999999988654321000
Q ss_pred CCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC--CCCCCceEEecCC
Q 016370 229 PSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP--ARANGHIFNVGNP 292 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~nv~~~ 292 (390)
.......-............|+. -+...+|+|++++.++... ....|+++.|.+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~Plg---------R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 204 MPDQASQKFYNFMASHKECIPIG---------AAGKPEHIANIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp CCHHHHHHHHHHHHHCTTTCTTS---------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CchHHHHHHHHHHHHHhcCCCCC---------CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence 00000011111222222222221 2556899999999988532 2257899999986
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.73 E-value=2e-17 Score=144.78 Aligned_cols=218 Identities=16% Similarity=0.136 Sum_probs=151.4
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC-ChhHHHHhhc-----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIK----- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~-d~~~~~~~~~----- 88 (390)
+++|+||||||++-||..++++|.++ |++|+++.|+.+....+.+........++.++.+|+. +.+++++++.
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~-G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999 9999999887655443332222223457899999998 5555665554
Q ss_pred --cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHh----C--C--CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE----N--N--KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~--~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|++||+||... .+.....+++|+.++.++..++.. . + .++|++||...+....
T Consensus 82 ~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~----------- 146 (254)
T d1sbya1 82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH----------- 146 (254)
T ss_dssp HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------
T ss_pred cCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC-----------
Confidence 3899999999763 345667899999998888776532 1 1 5799999876543221
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|.....+.+.++.+ +++++..+.||.+..|...-. .+......
T Consensus 147 ----------------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~----~~~~~~~~ 200 (254)
T d1sbya1 147 ----------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF----NSWLDVEP 200 (254)
T ss_dssp ----------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC----CCGGGSCT
T ss_pred ----------------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc----ccchhHHH
Confidence 2237999999999888887655 489999999999976521100 00000000
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.+ .....+ +.....+++|++++.+++... .|+++.+.+|
T Consensus 201 ~~----~~~~~~------------~~~~~~e~va~~~~~~~~~~~--tG~vi~vdgG 239 (254)
T d1sbya1 201 RV----AELLLS------------HPTQTSEQCGQNFVKAIEANK--NGAIWKLDLG 239 (254)
T ss_dssp TH----HHHHTT------------SCCEEHHHHHHHHHHHHHHCC--TTCEEEEETT
T ss_pred HH----Hhcccc------------CCCCCHHHHHHHHHHhhhCCC--CCCEEEECCC
Confidence 00 111111 123468999999999988753 7889998886
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1e-16 Score=139.47 Aligned_cols=224 Identities=16% Similarity=0.157 Sum_probs=158.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---cc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---MA 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---~~ 90 (390)
++++|++|||||++-||+.+++.|.++ |++|++++|+++..+.+.+ ..++....+|+.+.+.++.... ++
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~-G~~Vi~~~r~~~~l~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~i 75 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEK------YPGIQTRVLDVTKKKQIDQFANEVERL 75 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGG------STTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh------ccCCceeeeeccccccccccccccccc
Confidence 478999999999999999999999999 9999999999877766554 2578889999998877766655 49
Q ss_pred cEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHH----hCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 91 DLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
|++||+||........+ +....+++|+.++..+.+++. +.+ .++|++||... .. .+.
T Consensus 76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~--------~~~---- 141 (245)
T d2ag5a1 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SV--------KGV---- 141 (245)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TT--------BCC----
T ss_pred eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--cc--------CCc----
Confidence 99999999886543332 344567789999888877654 333 68999988532 00 000
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
.....|+.+|...+.+.+.++.++ |+++.++.||.+-.|..... ........
T Consensus 142 ------------------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~ 196 (245)
T d2ag5a1 142 ------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER-------IQARGNPE 196 (245)
T ss_dssp ------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH-------HHHSSSHH
T ss_pred ------------------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhh-------hhhhhhhH
Confidence 133479999999999999887554 79999999998876532100 00000011
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.+...+....|+ .-+...+|+|+++..++... ....|+.+.|.+|
T Consensus 197 ~~~~~~~~~~pl---------~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG 242 (245)
T d2ag5a1 197 EARNDFLKRQKT---------GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242 (245)
T ss_dssp HHHHHHHHTCTT---------SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred HHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCC
Confidence 222333333222 12667899999999998753 2357889999886
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=5e-17 Score=141.10 Aligned_cols=200 Identities=12% Similarity=0.077 Sum_probs=147.1
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
+.+.||.+|||||++-||++++++|.++ |++|++++|+.++...+...... ...++..+.+|++|.++++++++
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999 99999999998766554332221 24578899999999998888775
Q ss_pred ---cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||........+ .....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~--------- 151 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP--------- 151 (244)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH---------
T ss_pred HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC---------
Confidence 3899999999886543332 34456778999988777654 4555 7899999976543221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh------cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE------NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
....|+.+|.+.+.+.+.++.+ .|+.++++.||.+--+...
T Consensus 152 ------------------------~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~--------- 198 (244)
T d1yb1a_ 152 ------------------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--------- 198 (244)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT---------
T ss_pred ------------------------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh---------
Confidence 1237999999999988887654 3799999999887544221
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
... ......+..+|+|+.+...+...
T Consensus 199 ----~~~-------------------~~~~~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 199 ----NPS-------------------TSLGPTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp ----CTH-------------------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred ----CcC-------------------ccccCCCCHHHHHHHHHHHHhcC
Confidence 000 01112446899999999988774
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.72 E-value=4.8e-17 Score=143.02 Aligned_cols=235 Identities=15% Similarity=0.078 Sum_probs=153.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
+++.||+||||||++-||.++++.|+++ |++|++..++... .+...+... .....+..+.+|++|+++++.+++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~-G~~Vvi~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~v~~~~~~~~ 79 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELK-KLGAQGVAIQADISKPSEVVALFDKAV 79 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHH-HcCCCceEecCCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999 9999987665433 332222111 124578899999999988888776
Q ss_pred ----cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeec-ccccccccCCCCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFST-CEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss-~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||........ +.....+++|+.+...+++++..+- .+++.++| .+.+....
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~--------- 150 (259)
T d1ja9a_ 80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP--------- 150 (259)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC---------
T ss_pred HHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC---------
Confidence 389999999987543322 2344567789998888877664422 45555554 33222110
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC-CCC
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP-SEG 232 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~-~~~ 232 (390)
....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+...-... ..+ ...
T Consensus 151 ------------------------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~-~~~~~~~ 205 (259)
T d1ja9a_ 151 ------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSW-HYAPGGY 205 (259)
T ss_dssp ------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG-GTSTTCC
T ss_pred ------------------------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhh-hhhhhhc
Confidence 1236999999999998888754 47999999999885331000000 000 000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~~~ 292 (390)
.......+...+.+..|+. -+...+|+|+++..++..... ..|+.+.+.+|
T Consensus 206 ~~~~~~~~~~~~~~~~pl~---------R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 206 KGMPQEKIDEGLANMNPLK---------RIGYPADIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp TTCCHHHHHHHHHHTSTTS---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccCCHHHHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 0011222333334443322 255699999999998875432 47889999886
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=6.3e-17 Score=141.87 Aligned_cols=213 Identities=15% Similarity=0.127 Sum_probs=145.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc----
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
++++|.+|||||++-||.++++.|.++ |++|++.+|++...+.+.+..... ...++..+.+|+++++++++++.
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 85 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999 999999999887666554332221 23468889999999998887775
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC---CcEEEeecccccccccCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN---KRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~---~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
++|++||+|+........ ++....+++|+.+...+..++ ++.+ .++|++||.+-+....
T Consensus 86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p------- 158 (257)
T d1xg5a_ 86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP------- 158 (257)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS-------
T ss_pred hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCC-------
Confidence 389999999987543222 344556778998887766554 3332 6899999976432210
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh-----hcCccEEEeecceecCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA-----ENGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
. .....|+.+|...+.+.+.++. .+++++.++-|+.+-.+...
T Consensus 159 --~----------------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~-------- 206 (257)
T d1xg5a_ 159 --L----------------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-------- 206 (257)
T ss_dssp --C----------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH--------
T ss_pred --C----------------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh--------
Confidence 0 0123699999999999987764 35799999999876433211
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.+............ ....++..+|+|++++.++..+.
T Consensus 207 -----~~~~~~~~~~~~~~---------~~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 207 -----KLHDKDPEKAAATY---------EQMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp -----HHTTTCHHHHHHHH---------C---CBCHHHHHHHHHHHHHSCT
T ss_pred -----hcChhhHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCChh
Confidence 00000001111111 11235679999999999988754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.71 E-value=5.2e-17 Score=144.01 Aligned_cols=228 Identities=15% Similarity=0.082 Sum_probs=152.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||++-||+++++.|.++ |++|++++|+.+....+... ...++..+.+|+++.+++++++.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETD----HGDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----HGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHH----cCCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999 99999999988766554432 13578899999999998887765
Q ss_pred -cccEEEEeccccCCccc-----cC----ChhHHHHHhhhhHHHHHHHH----HhCCCcEEEeecccccccccCCCCCCC
Q 016370 89 -MADLTINLAAICTPADY-----NT----RPLDTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIGSFLPKD 154 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~-----~~----~~~~~~~~nv~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~~e~ 154 (390)
.+|++||+||....... .+ +....+++|+.++..+++++ ++.+.++|++||...+-...
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~------- 150 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG------- 150 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS-------
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC-------
Confidence 38999999997643211 11 13466889999988777655 34446788888754322110
Q ss_pred CCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc--CccEEEeecceecCCCCCCCCCCCCCCCC
Q 016370 155 SPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232 (390)
Q Consensus 155 ~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~ 232 (390)
....|+.+|...+.+.+.++.+. ++++..+.||.|-.+....... ....
T Consensus 151 --------------------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~--~~~~- 201 (276)
T d1bdba_ 151 --------------------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSL--GMGS- 201 (276)
T ss_dssp --------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGG--C----
T ss_pred --------------------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccch--hhhh-
Confidence 22369999999999888877554 4899999999886553220000 0000
Q ss_pred chhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhC--CCCCCCceEEecCC
Q 016370 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN--PARANGHIFNVGNP 292 (390)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~--~~~~~~~~~nv~~~ 292 (390)
....-..+...+....|+.. +...+|+|++++.++.. .....|+.++|.+|
T Consensus 202 ~~~~~~~~~~~~~~~~PlgR---------~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 202 KAISTVPLADMLKSVLPIGR---------MPEVEEYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp ------CHHHHHTTTCTTSS---------CCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred hccCcHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 00000112223333333221 44578999999887742 23357899999886
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.70 E-value=2e-16 Score=141.81 Aligned_cols=230 Identities=13% Similarity=0.079 Sum_probs=153.4
Q ss_pred CCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-
Q 016370 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 10 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
++..++++|++|||||+|-||++++++|.++ |++|++++|+........+.........+..+.+|+++.+.+++++.
T Consensus 18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~-Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~ 96 (294)
T d1w6ua_ 18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE 96 (294)
T ss_dssp SCTTTTTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh
Confidence 3445788999999999999999999999999 99999999998665544332222234578899999999998877664
Q ss_pred ------cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCC--CcEEEeecccccccccCCCCC
Q 016370 89 ------MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENN--KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 ------~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~--~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
++|++||+||......... +....+.+|......+...+ .... ..++.+||........
T Consensus 97 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~----- 171 (294)
T d1w6ua_ 97 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG----- 171 (294)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT-----
T ss_pred hhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc-----
Confidence 3899999999875433222 23344556777665554432 2222 5566666643222110
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+ +|+++.++.||.+-.+.....
T Consensus 172 ----------------------------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~------ 217 (294)
T d1w6ua_ 172 ----------------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR------ 217 (294)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------------
T ss_pred ----------------------------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhc------
Confidence 2236999999999999888754 479999999999976643210
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.. -............|+. -+...+|+|+++..++.... ...|+++.+.+|
T Consensus 218 ---~~-~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG 268 (294)
T d1w6ua_ 218 ---LD-PTGTFEKEMIGRIPCG---------RLGTVEELANLAAFLCSDYASWINGAVIKFDGG 268 (294)
T ss_dssp ---CC-TTSHHHHHHHTTCTTS---------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ---cC-CcHHHHHHHhhcCCCC---------CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 00 0011223333333321 24568999999999986532 257899999987
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.69 E-value=5.1e-16 Score=137.44 Aligned_cols=235 Identities=12% Similarity=0.098 Sum_probs=152.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
++++|++|||||++-||..+++.|.++ |++|++.+|+... .+.+.+... .....+.++.+|++|++++.++++.
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 92 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVK 92 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHHH-hhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999 9999999887543 222221111 1245788999999999988887763
Q ss_pred ----ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 ----ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 ----~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|++||+++........ .+....+++|+.++..+++++...- .++++++|....... .
T Consensus 93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~----------~- 161 (272)
T d1g0oa_ 93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------V- 161 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------C-
T ss_pred HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc----------c-
Confidence 89999999987543222 2344566789999988888775432 567777764321100 0
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
.....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+......... .......
T Consensus 162 ---------------------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~-~~~~~~~ 219 (272)
T d1g0oa_ 162 ---------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREY-IPNGENL 219 (272)
T ss_dssp ---------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGG-STTCTTC
T ss_pred ---------------------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhh-hhccccc
Confidence 12346999999999999887655 4899999999988543110000000 0000000
Q ss_pred hHHHH-HHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 236 VLACF-SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 236 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.-... ........|+ .-+...+|+|.+++.++.... ...|+++.|.+|
T Consensus 220 ~~~~~~~~~~~~~~Pl---------gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG 269 (272)
T d1g0oa_ 220 SNEEVDEYAAVQWSPL---------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 269 (272)
T ss_dssp CHHHHHHHHHHHSCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred chHHHHHHHHHccCCC---------CCCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence 00000 0011112221 126678999999999986432 247889999886
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.69 E-value=6.6e-16 Score=133.77 Aligned_cols=195 Identities=12% Similarity=0.072 Sum_probs=141.6
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCe-------EEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHK-------ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
||||||++-||+++++.|.++ |++ |++.+|+....+.+...... ....+.++.+|++|.++++++++
T Consensus 4 vlITGas~GIG~aia~~la~~-G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRA-EGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEccCCCHHHHHHHHHHHHh-CccccccCcEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 799999999999999999999 886 88889987765554332211 23567889999999998887775
Q ss_pred ---cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCC
Q 016370 89 ---MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSP 156 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~ 156 (390)
.+|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------- 152 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR--------- 152 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC---------
Confidence 389999999987543222 334557778999988777655 4444 7899999976543221
Q ss_pred CCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 157 LRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 157 ~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|.... .
T Consensus 153 ------------------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~----------~ 198 (240)
T d2bd0a1 153 ------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK----------V 198 (240)
T ss_dssp ------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC----------C
T ss_pred ------------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh----------c
Confidence 2237999999999888877544 58999999999886654320 0
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
. ......+...+|+|++++.++..+.
T Consensus 199 -------------------~--~~~~~~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 199 -------------------D--DEMQALMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp -------------------C--STTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred -------------------C--HhhHhcCCCHHHHHHHHHHHHcCCc
Confidence 0 0011124568999999999998764
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.67 E-value=1.6e-16 Score=139.67 Aligned_cols=225 Identities=12% Similarity=0.069 Sum_probs=150.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHh---hCCCeEEEEecCChhhhccccccccC-CCCCeeEEeCCCCChhHHHHhhc-
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILL---ETPHKILALDVYNDKIKHLLEPESQT-GADRIQFHRLNIKHDSRLEGLIK- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~---~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~i~~~~~D~~d~~~~~~~~~- 88 (390)
.+++|.++||||++-||..++++|.+ + |++|++++|+.+..+.+.+..... ...++..+.+|++++++++++++
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~-G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSP-GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCT-TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccC-CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 57889999999999999999999976 5 999999999887665543322111 23468889999999988887763
Q ss_pred ----------cccEEEEeccccCCcc----cc---CChhHHHHHhhhhHHHHHHHHHhCC-------CcEEEeecccccc
Q 016370 89 ----------MADLTINLAAICTPAD----YN---TRPLDTIYSNFIDALPVVKYCSENN-------KRLIHFSTCEVYG 144 (390)
Q Consensus 89 ----------~~d~Vih~a~~~~~~~----~~---~~~~~~~~~nv~~~~~l~~~~~~~~-------~~~v~~Ss~~vy~ 144 (390)
..|++||+||...+.. .. ++....+++|+.++..+.+++...- .++|++||...+.
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~ 161 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence 2679999998754211 11 2344578899999999988774331 4799999975432
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-CccEEEeecceecCCCCCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFI 223 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~ 223 (390)
... ....|+.+|...+.+.+.++.+. |+++..+.||.+-.+.....
T Consensus 162 ~~~---------------------------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~ 208 (259)
T d1oaaa_ 162 PYK---------------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLA 208 (259)
T ss_dssp CCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHH
T ss_pred CCc---------------------------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHh
Confidence 211 23479999999999998887554 79999999988865421100
Q ss_pred CCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEe
Q 016370 224 PGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289 (390)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv 289 (390)
.. ....+.....+...... + -+...+|+|++++.++....-..|+.+++
T Consensus 209 ~~----~~~~~~~~~~~~~~~~~---------~----r~~~p~evA~~i~~ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 209 RE----TSKDPELRSKLQKLKSD---------G----ALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp HH----HCSCHHHHHHHHHHHHT---------T----CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred hh----cCCCHHHHHHHHhcCCC---------C----CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence 00 00000011111111110 1 24568999999999887654445666665
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=1.2e-15 Score=133.32 Aligned_cols=217 Identities=14% Similarity=0.207 Sum_probs=148.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
++++||.+|||||++-||.+++++|.++ |++|++++|+.+..+...+. ..........|+.+.+.++....
T Consensus 1 ~slkGKvalITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (248)
T d2o23a1 1 RSVKGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKK----LGNNCVFAPADVTSEKDVQTALALAKG 75 (248)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHH----HCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHH----hCCCccccccccccccccccccccccc
Confidence 3678999999999999999999999999 99999999988766554432 13577888999998776655543
Q ss_pred ---cccEEEEeccccCCccc----------cCChhHHHHHhhhhHHHHHHHHHhC----------C-CcEEEeecccccc
Q 016370 89 ---MADLTINLAAICTPADY----------NTRPLDTIYSNFIDALPVVKYCSEN----------N-KRLIHFSTCEVYG 144 (390)
Q Consensus 89 ---~~d~Vih~a~~~~~~~~----------~~~~~~~~~~nv~~~~~l~~~~~~~----------~-~~~v~~Ss~~vy~ 144 (390)
..|.+++.++....... .+.....+++|+.++.++.+++... + .++|++||...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~ 155 (248)
T d2o23a1 76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE 155 (248)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence 37888888766532111 1233456788999999888877432 2 4799999976543
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCC
Q 016370 145 KTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMD 221 (390)
Q Consensus 145 ~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~ 221 (390)
... ....|+.+|...+.+.+.++.+. |+++..+.||.+..+...
T Consensus 156 ~~~---------------------------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~ 202 (248)
T d2o23a1 156 GQV---------------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT 202 (248)
T ss_dssp CCT---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred CCC---------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh
Confidence 221 23479999999999998887554 799999999988665432
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEe
Q 016370 222 FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289 (390)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv 289 (390)
.+...+........|+ . + -+...+|+|++++.+++. +...|++.+|
T Consensus 203 -------------~~~~~~~~~~~~~~pl--~--~----R~g~peevA~~v~fL~s~-~~itGq~I~v 248 (248)
T d2o23a1 203 -------------SLPEKVCNFLASQVPF--P--S----RLGDPAEYAHLVQAIIEN-PFLNGEVIRL 248 (248)
T ss_dssp --------------------CHHHHTCSS--S--C----SCBCHHHHHHHHHHHHHC-TTCCSCEEEE
T ss_pred -------------cCCHHHHHHHHhcCCC--C--C----CCcCHHHHHHHHHHHHhC-CCCCceEeEC
Confidence 1111222222222221 1 1 155789999999999875 3356777664
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.66 E-value=2.8e-15 Score=131.68 Aligned_cols=201 Identities=14% Similarity=0.124 Sum_probs=140.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhc---cccccccCCCCCeeEEeCCCCChhHHHHhhcc----
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKH---LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM---- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~---~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~---- 89 (390)
.+||||||+|-||..++++|.++ |+ .|+++.|+...... +..... .....+.++.+|++|.+++.+++..
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~-Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcccccc
Confidence 58999999999999999999999 88 47778886433221 111111 1245789999999999999888763
Q ss_pred --ccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecccccccccCCCCCCCCCCCCCcc
Q 016370 90 --ADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPA 162 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~ 162 (390)
.|.|||+++........+ +....+..|+.++.++.++++..+ .++|++||....-...
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~--------------- 152 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP--------------- 152 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT---------------
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc---------------
Confidence 799999999886543332 223345689999999999888877 8999999975432221
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHH
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (390)
....|+.+|...+.+.+++. ..|++++.+.||.+.+++.. .....
T Consensus 153 ------------------~~~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~----------------~~~~~ 197 (259)
T d2fr1a1 153 ------------------GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMA----------------EGPVA 197 (259)
T ss_dssp ------------------TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC--------------------------
T ss_pred ------------------ccHHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccc----------------cchHH
Confidence 22369999999999887764 45899999999988776432 00000
Q ss_pred HHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
.... ......+..+++++++..++....
T Consensus 198 ~~~~----------~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 198 DRFR----------RHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp --CT----------TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred HHHH----------hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 1000 111345679999999999998864
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.65 E-value=6.6e-16 Score=134.99 Aligned_cols=219 Identities=13% Similarity=0.114 Sum_probs=147.6
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------ccc
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-------MAD 91 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-------~~d 91 (390)
++|||||++.||..+++.|.++ |++|++.+|+.+....+... ...+..+|+.+.++++++++ ++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~-Ga~V~i~~r~~~~~~~~~~~-------~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAF-------AETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHH-------HHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhh-------hCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999 99999999987655544321 22334578877766666554 489
Q ss_pred EEEEeccccCC-cccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCCCCc
Q 016370 92 LTINLAAICTP-ADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP 161 (390)
Q Consensus 92 ~Vih~a~~~~~-~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~ 161 (390)
++||+||.... .... ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~-------------- 139 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK-------------- 139 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT--------------
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc--------------
Confidence 99999986532 1111 234456778999888777654 4444 7999999976543321
Q ss_pred cccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH
Q 016370 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238 (390)
Q Consensus 162 ~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 238 (390)
....|+.+|...+.+.+.++.+ +|+++..+.|+.+-.+...... +.. ......
T Consensus 140 -------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~----~~~-~~~~~~ 195 (252)
T d1zmta1 140 -------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY----PTE-PWKTNP 195 (252)
T ss_dssp -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC----BHH-HHTTCH
T ss_pred -------------------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhh----hcc-cccCCH
Confidence 1237999999999998887654 4799999999998765432000 000 000011
Q ss_pred HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.....+.+..|+. -+...+|+|+++..++.... ...|+.+.|.+|
T Consensus 196 e~~~~~~~~~pl~---------R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 196 EHVAHVKKVTALQ---------RLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp HHHHHHHHHSSSS---------SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred HHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 2233333333321 14568999999999986543 246889999986
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.65 E-value=6.4e-16 Score=138.32 Aligned_cols=213 Identities=16% Similarity=0.092 Sum_probs=143.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccc-----cccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP-----ESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
++++|++|||||++-||+.+++.|.++ |++|++.++..+........ ...........+.+|+.|.++.+++++
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~-Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 82 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 82 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence 357899999999999999999999999 99999998765322110000 000001233455677777766655554
Q ss_pred -------cccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCC
Q 016370 89 -------MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 -------~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
++|++||+||........ ++....+++|+.++..+++++ ++.+ .++|++||...+....
T Consensus 83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~----- 157 (302)
T d1gz6a_ 83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----- 157 (302)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC-----
Confidence 389999999988653332 234457779999988887765 4445 7999999975432211
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+ +|+++..+-|+.+--+...
T Consensus 158 ----------------------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~-------- 201 (302)
T d1gz6a_ 158 ----------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTET-------- 201 (302)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGG--------
T ss_pred ----------------------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhh--------
Confidence 2237999999999988887654 4799999999866322211
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
.+.. ....++..+|+|.+++.++.......|+++.+.+|
T Consensus 202 ------~~~~------------------~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 202 ------VMPE------------------DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp ------GSCH------------------HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred ------cCcH------------------hhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 1100 11123346899999999886444457888888876
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.64 E-value=7.5e-15 Score=128.16 Aligned_cols=171 Identities=16% Similarity=0.118 Sum_probs=120.6
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc----
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK---- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~---- 88 (390)
|.+|+||||||++-||..++++|+++ |+ .|++..|+.+....+.+. ...++.++.+|++|.++++++++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~-G~~~~Vi~~~R~~~~~~~l~~~----~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 75 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHC-CCCCEEEEEeCCHHHHHHHHHh----hCCceEEEEEecCCHHHHHHHHHHHHH
Confidence 56789999999999999999999998 74 688888988766554432 24589999999999988876654
Q ss_pred ---c--ccEEEEeccccCCcc--cc---CChhHHHHHhhhhHHHHHHHHHh----CC------------CcEEEeecccc
Q 016370 89 ---M--ADLTINLAAICTPAD--YN---TRPLDTIYSNFIDALPVVKYCSE----NN------------KRLIHFSTCEV 142 (390)
Q Consensus 89 ---~--~d~Vih~a~~~~~~~--~~---~~~~~~~~~nv~~~~~l~~~~~~----~~------------~~~v~~Ss~~v 142 (390)
. +|++||+||...... .. ++....+++|+.++..+.+++.. .+ .+++.+|+...
T Consensus 76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~ 155 (250)
T d1yo6a1 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence 2 799999999764311 11 22446788999999888776531 11 35666666433
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceec
Q 016370 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI 216 (390)
Q Consensus 143 y~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 216 (390)
+-..... . ....+...|+.||.+...+.+.++.+ .|+++..+-||.+-
T Consensus 156 ~~~~~~~---~-----------------------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~ 206 (250)
T d1yo6a1 156 SITDNTS---G-----------------------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp CSTTCCS---T-----------------------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred cccCCcc---c-----------------------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 2221100 0 00113446999999999888887654 47999999998774
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=8.5e-15 Score=128.50 Aligned_cols=223 Identities=9% Similarity=0.016 Sum_probs=150.5
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|+||||||+| -||+++++.|+++ |++|++.+|++.......+... .......+..|+.+..+....+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~-G~~V~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAA--QLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHH--HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHh--hcCCcceeecccchHHHHHHHHHHhh
Confidence 36889999999999 7999999999999 9999999998654333222111 12456778889998877766654
Q ss_pred ----cccEEEEeccccCCccccC---------ChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCC
Q 016370 89 ----MADLTINLAAICTPADYNT---------RPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~---------~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
..|++||+++......... .....+..|+.+...+++++...- ..+|++||........
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~----- 153 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----- 153 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC-----
Confidence 2799999998764332211 122344467777777777665533 6788888865321110
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+. |+++.++.||.|..+....
T Consensus 154 ----------------------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~------- 198 (258)
T d1qsga_ 154 ----------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG------- 198 (258)
T ss_dssp ----------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG-------
T ss_pred ----------------------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc-------
Confidence 22379999999999998887654 6999999999998765431
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
...............|+. -+...+|+|+++..++... +...|+++.+.+|
T Consensus 199 ----~~~~~~~~~~~~~~~pl~---------R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG 249 (258)
T d1qsga_ 199 ----IKDFRKMLAHCEAVTPIR---------RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 249 (258)
T ss_dssp ----STTHHHHHHHHHHHSTTS---------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ----cchhhhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhCchhcCccCceEEECcC
Confidence 011122223333322221 1456899999999988643 2357889999886
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.61 E-value=6.5e-15 Score=128.37 Aligned_cols=171 Identities=15% Similarity=0.197 Sum_probs=121.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHh--hCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILL--ETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~----- 88 (390)
.||+||||||++-||..+++.|++ +.|++|++.+|+.+..+.+.+... ...++.++.+|++|.++++++++
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 78 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK--NHSNIHILEIDLRNFDAYDKLVADIEGV 78 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH--HCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh--cCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence 378999999999999999999985 348999999999876655432211 13589999999999988876654
Q ss_pred ----cccEEEEeccccCCcc-c-cCC---hhHHHHHhhhhHHHHHHHHHh---------------CC-CcEEEeeccccc
Q 016370 89 ----MADLTINLAAICTPAD-Y-NTR---PLDTIYSNFIDALPVVKYCSE---------------NN-KRLIHFSTCEVY 143 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~-~-~~~---~~~~~~~nv~~~~~l~~~~~~---------------~~-~~~v~~Ss~~vy 143 (390)
.+|++||+||...... . ..+ ....+++|+.++..+++++.. .+ .++|++||..-.
T Consensus 79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~ 158 (248)
T d1snya_ 79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 158 (248)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 2899999999764321 1 222 345778999998888776531 12 678999985421
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 144 ~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
.... +. .....|+.||.....+.+.++.+ .|+++..+.||.+--+
T Consensus 159 --~~~~------~~----------------------~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 159 --IQGN------TD----------------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp --STTC------CS----------------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred --cCCC------CC----------------------CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 1000 00 02237999999999888777543 4799999999888544
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.6e-14 Score=128.34 Aligned_cols=167 Identities=11% Similarity=0.103 Sum_probs=119.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEe---cCChhhhcccccc--ccCCCCCeeEEeCCCCChhHHHHhhcc---
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALD---VYNDKIKHLLEPE--SQTGADRIQFHRLNIKHDSRLEGLIKM--- 89 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~---r~~~~~~~~~~~~--~~~~~~~i~~~~~D~~d~~~~~~~~~~--- 89 (390)
|-||||||++-||+++++.|.++ |.+|+.+. |+......+.+.. ......++..+.+|++|.+++..++..
T Consensus 3 kVvlITGassGIG~a~A~~la~~-Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASD-PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTC-TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CEEEEccCCCHHHHHHHHHHHHC-CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 34789999999999999999998 87755544 3332222211100 011245789999999999999888753
Q ss_pred --ccEEEEeccccCCcccc----CChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccccCCCCCCCCCCC
Q 016370 90 --ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 90 --~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
+|++||+|+........ ++....+++|+.++.++++++ ++.+ .++|++||........
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~----------- 150 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP----------- 150 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT-----------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC-----------
Confidence 89999999988654333 234456778999988877654 4455 7999999975432211
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
....|+.+|...+.+.+.++.+ +|+++.++.||.+--+
T Consensus 151 ----------------------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~ 191 (285)
T d1jtva_ 151 ----------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (285)
T ss_dssp ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred ----------------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence 2347999999999988887654 4899999999988554
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.5e-14 Score=127.62 Aligned_cols=201 Identities=9% Similarity=0.020 Sum_probs=141.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc------
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------ 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------ 88 (390)
+++|++|||||++-||.+++++|.++ |++|++++|+.+..+.+...........+..+.+|+.+.+....++.
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~-G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999 99999999998776655433222234577889999998777665544
Q ss_pred -cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHH----HhCCCcEEEeecccccccccCCCCCCCCCCCC
Q 016370 89 -MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYC----SENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159 (390)
Q Consensus 89 -~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~----~~~~~~~v~~Ss~~vy~~~~~~~~~e~~~~~~ 159 (390)
..|+++++|+......... +....+++|+.++..+.+++ ++.+.++|++||...+-...
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p------------ 158 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP------------ 158 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT------------
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCC------------
Confidence 3899999998875433222 23356778998887776655 33336899999876432211
Q ss_pred CccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCCCch
Q 016370 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234 (390)
Q Consensus 160 ~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 234 (390)
....|+.||...+.+.+.++.+ .++++..+.||.+-.+
T Consensus 159 ---------------------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------------- 201 (269)
T d1xu9a_ 159 ---------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------------- 201 (269)
T ss_dssp ---------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----------------
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc----------------
Confidence 2347999999999998888654 3588888999877432
Q ss_pred hhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC
Q 016370 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279 (390)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 279 (390)
+. .....+ ......+..+++|+.++..+...
T Consensus 202 -~~----~~~~~~---------~~~~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 202 -TA----MKAVSG---------IVHMQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp -HH----HHHSCG---------GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred -HH----HHhccC---------CccccCCCHHHHHHHHHHHhhcC
Confidence 11 111111 11223455789999998887764
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=3.8e-14 Score=122.44 Aligned_cols=200 Identities=12% Similarity=0.090 Sum_probs=135.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH-------hhc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG-------LIK 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~-------~~~ 88 (390)
++|+||||||+|-||+++++.|.++ |++|+++++.+.... .....+..|..+.++... .+.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~-G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLG 68 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCccccc-----------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999 999999988664322 223344455554433332 222
Q ss_pred --cccEEEEeccccCCc-ccc----CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCC
Q 016370 89 --MADLTINLAAICTPA-DYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLR 158 (390)
Q Consensus 89 --~~d~Vih~a~~~~~~-~~~----~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~ 158 (390)
++|++||+||..... ... ++....+++|+.++.++..++..+- .++|++||...+....
T Consensus 69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~----------- 137 (236)
T d1dhra_ 69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------- 137 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------
T ss_pred CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc-----------
Confidence 289999999864321 111 2234467789999888877765432 7899999976433221
Q ss_pred CCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-----cCccEEEeecceecCCCCCCCCCCCCCCCCc
Q 016370 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-----NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233 (390)
Q Consensus 159 ~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 233 (390)
....|+.+|...+.+.+.++.+ .|+++..+.|+.+.-|.
T Consensus 138 ----------------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~-------------- 181 (236)
T d1dhra_ 138 ----------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------------- 181 (236)
T ss_dssp ----------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH--------------
T ss_pred ----------------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc--------------
Confidence 1237999999999999998765 36999999998886542
Q ss_pred hhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC-CCCceEEec
Q 016370 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVG 290 (390)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~nv~ 290 (390)
. +...... ..-.++..+|+|+.+..++..... ..|+.+.|.
T Consensus 182 ---~----~~~~~~~---------~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v~ 223 (236)
T d1dhra_ 182 ---N----RKSMPEA---------DFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVV 223 (236)
T ss_dssp ---H----HHHSTTS---------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred ---c----hhhCccc---------hhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEEE
Confidence 1 1111111 112467789999999999876432 456666653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.5e-14 Score=128.03 Aligned_cols=201 Identities=13% Similarity=0.054 Sum_probs=126.0
Q ss_pred CCEE-EEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-------
Q 016370 17 PVTI-CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK------- 88 (390)
Q Consensus 17 ~~~v-lItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~------- 88 (390)
||+| |||||++-||..++++|.+++|+.|++.+|+.+..+...+.... ....+.++.+|++|.++++++++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-EGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 5666 89999999999999999987689999999998776544332211 23578899999999998877665
Q ss_pred cccEEEEeccccCCccccC----ChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccC-CCC-----CCCC
Q 016370 89 MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIG-SFL-----PKDS 155 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~-~~~-----~e~~ 155 (390)
.+|++||+||......... +....+++|+.++..+++++...- .++|++||......... .+. .-..
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~ 160 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET 160 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccc
Confidence 3899999999875433322 233467799999999988875432 68999999643221110 000 0000
Q ss_pred CCCCC--ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh-------cCccEEEeecceecCC
Q 016370 156 PLRQD--PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-------NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 156 ~~~~~--~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~i~G~ 218 (390)
..... ........+...........|...|+.+|.....+.+.++++ .++.+..+.||.+--+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~ 232 (275)
T d1wmaa1 161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 232 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence 00000 000000000000000011124557999999988776554432 3799999999988544
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.55 E-value=9.7e-14 Score=122.73 Aligned_cols=223 Identities=9% Similarity=0.030 Sum_probs=141.6
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc---
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--- 88 (390)
.+++|++|||||+| -||.++++.|.++ |++|++++|++.......+... ......++..|+++.+.+.+++.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~-Ga~V~i~~r~~~~~~~~~~l~~--~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQ--ELNSPYVYELDVSKEEHFKSLYNSVK 78 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHH--HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHh--hCCceeEeeecccchhhHHHHHHHHH
Confidence 46899999999988 6999999999999 9999999998643332222111 13466788999999888777764
Q ss_pred ----cccEEEEeccccCCccccC-----ChhHHHHH---hhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCC
Q 016370 89 ----MADLTINLAAICTPADYNT-----RPLDTIYS---NFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPK 153 (390)
Q Consensus 89 ----~~d~Vih~a~~~~~~~~~~-----~~~~~~~~---nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e 153 (390)
.+|++||+++......... ........ +............+.. ..++.+|+.......
T Consensus 79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~------- 151 (274)
T d2pd4a1 79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM------- 151 (274)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc-------
Confidence 3899999999774322111 11111112 2223333333333332 445555555443322
Q ss_pred CCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCC
Q 016370 154 DSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPS 230 (390)
Q Consensus 154 ~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 230 (390)
.....|+.+|...+.+.+..+.+ .|+++.++.|+.+.-+.....
T Consensus 152 --------------------------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~------- 198 (274)
T d2pd4a1 152 --------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI------- 198 (274)
T ss_dssp --------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-------
T ss_pred --------------------------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc-------
Confidence 12347999999999988877654 479999999998876644310
Q ss_pred CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.. ............|. .-+...+|+|.++..++... ....|+++.|.+|
T Consensus 199 ---~~-~~~~~~~~~~~~p~---------~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG 248 (274)
T d2pd4a1 199 ---AD-FRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 248 (274)
T ss_dssp ---TT-HHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---Cc-hHHHHHHHhhhhhc---------cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence 00 11122222222221 12556999999999988753 2257889999997
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.53 E-value=7.2e-14 Score=120.60 Aligned_cols=199 Identities=13% Similarity=0.122 Sum_probs=132.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHH-------Hhh--c
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLE-------GLI--K 88 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~-------~~~--~ 88 (390)
.|||||||+|-||.+++++|.++ |++|++++|.+.... .....+.+|..+.+... ..+ .
T Consensus 3 gkVlITGas~GIG~aia~~l~~~-G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 47999999999999999999999 999999999764322 23334456666443332 222 2
Q ss_pred cccEEEEeccccCCc-ccc----CChhHHHHHhhhhHHHHHHHHHhCC---CcEEEeecccccccccCCCCCCCCCCCCC
Q 016370 89 MADLTINLAAICTPA-DYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~-~~~----~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~ 160 (390)
.+|++||+||..... ... +.....+++|+.++..+++++...- .++|++||...+....
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~------------- 137 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP------------- 137 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-------------
Confidence 389999999964321 111 2233457789999888877765432 6899999976443221
Q ss_pred ccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc-----CccEEEeecceecCCCCCCCCCCCCCCCCchh
Q 016370 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-----GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235 (390)
Q Consensus 161 ~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~ 235 (390)
....|+.+|...+.+.+.++.+. ++++..+.|+.+--+
T Consensus 138 --------------------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~----------------- 180 (235)
T d1ooea_ 138 --------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP----------------- 180 (235)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------------
T ss_pred --------------------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-----------------
Confidence 22379999999999999987553 567788888776432
Q ss_pred hHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCC--CCCceEEecC
Q 016370 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR--ANGHIFNVGN 291 (390)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~nv~~ 291 (390)
+. +..... .....++..+|+++.++..+..+.. ..|..+.|.+
T Consensus 181 ~~----~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~~ 225 (235)
T d1ooea_ 181 MN----RKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITT 225 (235)
T ss_dssp HH----HHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred ch----hhhCcC---------CccccCCCHHHHHHHHHHHhcCccccCCCceEEEEEe
Confidence 21 122211 1123467899999998877665431 3566777743
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.52 E-value=3.4e-13 Score=116.76 Aligned_cols=206 Identities=12% Similarity=0.175 Sum_probs=140.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc------cc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM------AD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~------~d 91 (390)
|++|||||++-||++++++|.++ |++|++++|+++. .....+.+|+.+......+... .+
T Consensus 2 K~alITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR-GYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhcccccc
Confidence 78999999999999999999999 9999999997642 2456678999987766655542 45
Q ss_pred EEEEeccccCCccc--------cCChhHHHHHhhhhHHHHHHHHHh----------CC-CcEEEeecccccccccCCCCC
Q 016370 92 LTINLAAICTPADY--------NTRPLDTIYSNFIDALPVVKYCSE----------NN-KRLIHFSTCEVYGKTIGSFLP 152 (390)
Q Consensus 92 ~Vih~a~~~~~~~~--------~~~~~~~~~~nv~~~~~l~~~~~~----------~~-~~~v~~Ss~~vy~~~~~~~~~ 152 (390)
.+++.++....... .......+++|+.+...++..+.. .+ .++|++||...+....
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~----- 142 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI----- 142 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-----
Confidence 55555544321111 112334667888887777665432 12 5899999976543321
Q ss_pred CCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCC
Q 016370 153 KDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGP 229 (390)
Q Consensus 153 e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~ 229 (390)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+...
T Consensus 143 ----------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~-------- 186 (241)
T d1uaya_ 143 ----------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ-------- 186 (241)
T ss_dssp ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH--------
T ss_pred ----------------------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc--------
Confidence 2237999999999999888754 4799999999988654322
Q ss_pred CCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCCCCCCceEEecCC
Q 016370 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292 (390)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~nv~~~ 292 (390)
..............++ . + -+...+|+|++++.++.. +...|+++.|.+|
T Consensus 187 -----~~~~~~~~~~~~~~~~--~--~----R~g~pedvA~~v~fL~s~-~~iTG~~i~VDGG 235 (241)
T d1uaya_ 187 -----GLPEKAKASLAAQVPF--P--P----RLGRPEEYAALVLHILEN-PMLNGEVVRLDGA 235 (241)
T ss_dssp -----TSCHHHHHHHHTTCCS--S--C----SCCCHHHHHHHHHHHHHC-TTCCSCEEEESTT
T ss_pred -----hhhhhHHHHHHhcCCC--C--C----CCcCHHHHHHHHHHHHhC-CCCCCCEEEECCc
Confidence 1112222233333222 1 1 144689999999999885 4467899999886
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.49 E-value=5.1e-13 Score=117.61 Aligned_cols=231 Identities=12% Similarity=0.044 Sum_probs=141.3
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhc--
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-- 88 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-- 88 (390)
.|++|++|||||+| -||.+++++|.++ |++|++.+|+..... .+.+. .......+.+|+.+.++...+++
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~-Ga~Vil~~~~~~~~~~~~~~~----~~~~~~~~~~dv~~~~~~~~~~~~v 77 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDR----LPAKAPLLELDVQNEEHLASLAGRV 77 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTT----SSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHH----cCCceeeEeeecccccccccccchh
Confidence 46899999999765 4999999999999 999999999876542 22221 24567889999999876655543
Q ss_pred --------cccEEEEeccccCCccc-----c----CChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeecccccccccCC
Q 016370 89 --------MADLTINLAAICTPADY-----N----TRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGS 149 (390)
Q Consensus 89 --------~~d~Vih~a~~~~~~~~-----~----~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~ 149 (390)
..|+++|+++....... . ......+..|+.........+.... ...+.++|........
T Consensus 78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p-- 155 (268)
T d2h7ma1 78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP-- 155 (268)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT--
T ss_pred hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCc--
Confidence 26999999986532111 1 1122234456666665555555443 3444444433221110
Q ss_pred CCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhhc---CccEEEeecceecCCCCCCCCCC
Q 016370 150 FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN---GLEFTIVRPFNWIGPRMDFIPGI 226 (390)
Q Consensus 150 ~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~ 226 (390)
....|+.+|...+.+.+.++.+. |+++..+.|+.+-.+.......
T Consensus 156 -------------------------------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~- 203 (268)
T d2h7ma1 156 -------------------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVG- 203 (268)
T ss_dssp -------------------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHT-
T ss_pred -------------------------------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhcc-
Confidence 12379999999999998887554 7999999999875431100000
Q ss_pred CCCC-CCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-CCCCCceEEecCC
Q 016370 227 DGPS-EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNP 292 (390)
Q Consensus 227 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~nv~~~ 292 (390)
.+. .........+........|+ .+-+...+|+|+++..++... ....|+++.|.+|
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~pl--------~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG 262 (268)
T d2h7ma1 204 -GALGEEAGAQIQLLEEGWDQRAPI--------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 262 (268)
T ss_dssp -TTTCHHHHHHHHHHHHHHHHHCTT--------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred -chhhhhhccchHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 000 00011112222222222222 122445899999999998642 2247889999987
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.45 E-value=1.2e-12 Score=116.19 Aligned_cols=220 Identities=14% Similarity=0.061 Sum_probs=138.4
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-hhccccccccCCC-----------------CCeeEEeCCCCCh
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-IKHLLEPESQTGA-----------------DRIQFHRLNIKHD 80 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~-----------------~~i~~~~~D~~d~ 80 (390)
.+|||||++-||+++++.|.++ |++|++.+++... ...+......... ..+..+.+|+++.
T Consensus 4 VAlITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 5799999999999999999999 9999998776532 2221111111011 1233456678888
Q ss_pred hHHHHhhc-------cccEEEEeccccCCccccCCh------------------hHHHHHhhhhHHHHHHHHHh------
Q 016370 81 SRLEGLIK-------MADLTINLAAICTPADYNTRP------------------LDTIYSNFIDALPVVKYCSE------ 129 (390)
Q Consensus 81 ~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~------------------~~~~~~nv~~~~~l~~~~~~------ 129 (390)
++++++++ ++|++||+||...+....... ...+.+|+.+...+.+++.+
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 88887764 489999999987543222111 12456788888777766432
Q ss_pred ---CC--CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh--
Q 016370 130 ---NN--KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE-- 202 (390)
Q Consensus 130 ---~~--~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-- 202 (390)
.+ .++|+++|....... .....|+.+|...+.+.+.++.+
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~~---------------------------------~~~~~Y~asKaal~~lt~~lA~el~ 209 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQPL---------------------------------LGYTIYTMAKGALEGLTRSAALELA 209 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSCC---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHhcCCCCcccccccccccCCc---------------------------------cceeeeccccccchhhhHHHHHHhC
Confidence 12 457777665432211 02347999999999999888754
Q ss_pred -cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCC-C
Q 016370 203 -NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-A 280 (390)
Q Consensus 203 -~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~-~ 280 (390)
+|+++..+.||.+-... ..............|+ . + -+...+|+|++++.++... .
T Consensus 210 ~~gIrvN~I~PG~t~~~~---------------~~~~~~~~~~~~~~pl--~--~----R~~~peeiA~~v~fL~S~~s~ 266 (284)
T d1e7wa_ 210 PLQIRVNGVGPGLSVLVD---------------DMPPAVWEGHRSKVPL--Y--Q----RDSSAAEVSDVVIFLCSSKAK 266 (284)
T ss_dssp GGTEEEEEEEESSBCCGG---------------GSCHHHHHHHHTTCTT--T--T----SCBCHHHHHHHHHHHHSGGGT
T ss_pred Cccccccccccccccccc---------------cCCHHHHHHHHhcCCC--C--C----CCCCHHHHHHHHHHHhCchhc
Confidence 47999999998532111 1222334444444332 1 1 1456999999999988643 2
Q ss_pred CCCCceEEecCCCCcc
Q 016370 281 RANGHIFNVGNPHNEV 296 (390)
Q Consensus 281 ~~~~~~~nv~~~~~~~ 296 (390)
...|+.+.|.+| ..+
T Consensus 267 ~itG~~i~VDGG-~sl 281 (284)
T d1e7wa_ 267 YITGTCVKVDGG-YSL 281 (284)
T ss_dssp TCCSCEEEESTT-GGG
T ss_pred CccCCeEEECcC-hhc
Confidence 257889999987 444
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.41 E-value=1.1e-11 Score=110.52 Aligned_cols=226 Identities=9% Similarity=-0.024 Sum_probs=137.7
Q ss_pred CCCCCEEEEEcCch--hHHHHHHHHHHhhCCCeEEEEecCChhhh-------------ccccccccCCCCCeeEEeCCCC
Q 016370 14 PIKPVTICMIGAGG--FIGSHLCEKILLETPHKILALDVYNDKIK-------------HLLEPESQTGADRIQFHRLNIK 78 (390)
Q Consensus 14 ~~~~~~vlItGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------------~~~~~~~~~~~~~i~~~~~D~~ 78 (390)
.+++|++|||||+| -||..+++.|.++ |++|++.+|.+.... ............++..+..++.
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAA-GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 36889999999988 7999999999999 999999988642110 0000000000001112222221
Q ss_pred ---------------------ChhHH----HHhhccccEEEEeccccCC--c-c---ccCChhHHHHHhhhhHHHHHHHH
Q 016370 79 ---------------------HDSRL----EGLIKMADLTINLAAICTP--A-D---YNTRPLDTIYSNFIDALPVVKYC 127 (390)
Q Consensus 79 ---------------------d~~~~----~~~~~~~d~Vih~a~~~~~--~-~---~~~~~~~~~~~nv~~~~~l~~~~ 127 (390)
+.+.+ .+.+.++|++||+||.... . . ..++....+++|+.+...++.++
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 163 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence 11222 2223359999999987531 1 1 11234457778999999988877
Q ss_pred HhCC---CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhh---
Q 016370 128 SENN---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA--- 201 (390)
Q Consensus 128 ~~~~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~--- 201 (390)
.... .+.+.+++........ .....|..+|...+.+.+.++.
T Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~--------------------------------~~~~~y~~aKaa~~~l~~~~a~e~~ 211 (297)
T d1d7oa_ 164 LPIMNPGGASISLTYIASERIIP--------------------------------GYGGGMSSAKAALESDTRVLAFEAG 211 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCT--------------------------------TCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCcceeeeehhhccccc--------------------------------ccccceecccccccccccccchhcc
Confidence 6544 4455656543221110 1223699999988877765543
Q ss_pred -hcCccEEEeecceecCCCCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC
Q 016370 202 -ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280 (390)
Q Consensus 202 -~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 280 (390)
++|+++..+.||.+..+.... ......+........|+. -+...+|+|.+++.++....
T Consensus 212 ~~~gIrvN~I~PG~i~T~~~~~-----------~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~~a 271 (297)
T d1d7oa_ 212 RKQNIRVNTISAGPLGSRAAKA-----------IGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLA 271 (297)
T ss_dssp HHHCCEEEEEEECCCBCCCSSC-----------CSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGG
T ss_pred ccceEEecccccccccchhhhh-----------ccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCchh
Confidence 458999999999997775431 112334444444443432 14569999999999986432
Q ss_pred -CCCCceEEecCC
Q 016370 281 -RANGHIFNVGNP 292 (390)
Q Consensus 281 -~~~~~~~nv~~~ 292 (390)
...|+++.|.+|
T Consensus 272 ~~itGq~i~vDGG 284 (297)
T d1d7oa_ 272 SAITGATIYVDNG 284 (297)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCcCceEEECcC
Confidence 257889999886
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.38 E-value=1.4e-11 Score=108.00 Aligned_cols=217 Identities=14% Similarity=0.154 Sum_probs=133.0
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCCh----hHHHHhh------
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHD----SRLEGLI------ 87 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~----~~~~~~~------ 87 (390)
..|||||++-||..++++|+++ |++|++++|+.++. +.+.+............+..|+.+. +.+.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~-G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 5799999999999999999999 99999999986543 2222222222334666666666542 3333322
Q ss_pred -ccccEEEEeccccCCccccC---------------ChhHHHHHhhhhHHHHHHHHHhCC----------CcEEEeeccc
Q 016370 88 -KMADLTINLAAICTPADYNT---------------RPLDTIYSNFIDALPVVKYCSENN----------KRLIHFSTCE 141 (390)
Q Consensus 88 -~~~d~Vih~a~~~~~~~~~~---------------~~~~~~~~nv~~~~~l~~~~~~~~----------~~~v~~Ss~~ 141 (390)
.++|++||+||...+..... .....+..|+.+............ ..++.+|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 34999999999875322111 111223345444444433332211 2444444433
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCC
Q 016370 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGP 218 (390)
Q Consensus 142 vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 218 (390)
..... .....|+.+|...+.+.+.++.+ +|+++..+.||.+.-+
T Consensus 162 ~~~~~---------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~ 208 (266)
T d1mxha_ 162 TDLPL---------------------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 208 (266)
T ss_dssp GGSCC---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred ccccC---------------------------------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecc
Confidence 22111 12347999999999998887654 4799999999988655
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
... -........+..|+ + +-+...+|+|.+++.++.... ...|+++.|.+|
T Consensus 209 ~~~---------------~~~~~~~~~~~~pl---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG 260 (266)
T d1mxha_ 209 PAM---------------PQETQEEYRRKVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 260 (266)
T ss_dssp SSS---------------CHHHHHHHHTTCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccC---------------CHHHHHHHHhcCCC---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECcc
Confidence 322 12233334443332 1 113468999999999997532 247889999986
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.24 E-value=1e-10 Score=105.63 Aligned_cols=168 Identities=10% Similarity=0.023 Sum_probs=107.1
Q ss_pred CCEEEEEc--CchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc--------ccccc---CCCCCeeEEeC--------
Q 016370 17 PVTICMIG--AGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL--------EPESQ---TGADRIQFHRL-------- 75 (390)
Q Consensus 17 ~~~vlItG--atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~--------~~~~~---~~~~~i~~~~~-------- 75 (390)
.|.+|||| ++.-||..+++.|.++ |.+|++..+......... ..... ..........+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~-GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKR-NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHc-CCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 57899999 5568999999999999 999999877543211100 00000 00011222222
Q ss_pred ------------CCCChhHHHHhh-------ccccEEEEeccccCCc--c----ccCChhHHHHHhhhhHHHHHHHHHhC
Q 016370 76 ------------NIKHDSRLEGLI-------KMADLTINLAAICTPA--D----YNTRPLDTIYSNFIDALPVVKYCSEN 130 (390)
Q Consensus 76 ------------D~~d~~~~~~~~-------~~~d~Vih~a~~~~~~--~----~~~~~~~~~~~nv~~~~~l~~~~~~~ 130 (390)
|+.+.+.++.++ .++|++||.||..... . ..++....+++|+.++..+++++...
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 444444444433 3499999999865421 1 11234456778998888888877654
Q ss_pred C---CcEEEeecccccccccCCCCCCCCCCCCCccccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh----c
Q 016370 131 N---KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----N 203 (390)
Q Consensus 131 ~---~~~v~~Ss~~vy~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~ 203 (390)
- .++|.+||....... | ...+.|+.+|...+.+.+.++.+ +
T Consensus 161 m~~~GsIv~iss~~~~~~~---------p-----------------------~y~~~y~asKaal~~ltr~lA~Ela~~~ 208 (329)
T d1uh5a_ 161 MKPQSSIISLTYHASQKVV---------P-----------------------GYGGGMSSAKAALESDTRVLAYHLGRNY 208 (329)
T ss_dssp EEEEEEEEEEECGGGTSCC---------T-----------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeehhcccc---------c-----------------------ccchhhhhhhccccccchhhHHHHhccc
Confidence 2 689999876542211 0 12336999999999998887643 5
Q ss_pred CccEEEeecceecC
Q 016370 204 GLEFTIVRPFNWIG 217 (390)
Q Consensus 204 ~~~~~ilR~~~i~G 217 (390)
|+++..+.||.|--
T Consensus 209 gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 209 NIRINTISAGPLKS 222 (329)
T ss_dssp CCEEEEEEECCCCC
T ss_pred CcEEEEEecCcccc
Confidence 89999999997743
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.21 E-value=2.1e-12 Score=107.44 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=71.3
Q ss_pred CCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcccc
Q 016370 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 12 ~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d 91 (390)
...+++|+|+||||+|.||+.+++.|.++ |++|++++|+.+....+...... ...+....+|+.|.+++++++.++|
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~iD 94 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNK--RFKVNVTAAETADDASRAEAVKGAH 94 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHH--HHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhh-ccchhhcccchHHHHHHHHHHHh--ccchhhhhhhcccHHHHHHHhcCcC
Confidence 34678999999999999999999999999 99999999998765544332111 1355678899999999999999999
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
+|||+|+..
T Consensus 95 ilin~Ag~g 103 (191)
T d1luaa1 95 FVFTAGAIG 103 (191)
T ss_dssp EEEECCCTT
T ss_pred eeeecCccc
Confidence 999999864
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.19 E-value=2.5e-10 Score=99.29 Aligned_cols=227 Identities=11% Similarity=0.090 Sum_probs=123.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh--------c
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI--------K 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~--------~ 88 (390)
||.||||||++-||.+++++|.++ |++|++++|+.... ..|+.+.+...... .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~-Ga~V~~~~~~~~~~------------------~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDAEV------------------IADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSSSE------------------ECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECChHHH------------------HHHhcCHHHHHHHHHHHHHHhCC
Confidence 678999999999999999999999 99999999875321 34566554433322 2
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHH----HhCC-CcEEEeecccccccc-cCCCCCCCCCCCCCcc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKT-IGSFLPKDSPLRQDPA 162 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~-~~~~~~e~~~~~~~~~ 162 (390)
..|+++++|+.... .........+|..+...+.+.. .+.. .....+++....... ...+........
T Consensus 62 ~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---- 134 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAG---- 134 (257)
T ss_dssp CCSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT----
T ss_pred CCcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCC----
Confidence 38999999987642 2233445567777766655433 3333 445555443221110 000000000000
Q ss_pred ccccccCCCCcccCCCCCCCchhHHHHHHHHHHHHHHhhh---cCccEEEeecceecCCCCCCCCCCCCCCCCchhhHH-
Q 016370 163 YYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA- 238 (390)
Q Consensus 163 ~~~~~e~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~- 238 (390)
....--+ -........+...|+.+|...+.+.+.++.+ +|+++..+.||.+-.|... ..+.
T Consensus 135 ~~~~i~s--~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~-------------~~~~~ 199 (257)
T d1fjha_ 135 EEAKARA--IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ-------------AGLQD 199 (257)
T ss_dssp CHHHHHH--HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------
T ss_pred cEEEEee--ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHH-------------hhcCC
Confidence 0000000 0000000012236999999999999888744 4799999999998665422 0000
Q ss_pred -HHHHHHhcCCCeEEecCCcceeeeeeHHHHHHHHHHHHhCCC-CCCCceEEecCC
Q 016370 239 -CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292 (390)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~nv~~~ 292 (390)
.+.....+.. .+.--+...+|+|+++..++.... ...|+.+.|.+|
T Consensus 200 ~~~~~~~~~~~--------~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 200 PRYGESIAKFV--------PPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp ---------CC--------CSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 0011111110 011125568999999999886432 257889999885
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.57 E-value=2e-07 Score=71.59 Aligned_cols=72 Identities=22% Similarity=0.249 Sum_probs=61.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
|+|+|+|+ |.+|+.+++.|.+. |++|++++.+++....+... -++.++.||.+|++.+.++ ++.+|+|+-+
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~~~------~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAE------IDALVINGDCTKIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH------CSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHC-CCCcceecCChhhhhhhhhh------hhhhhccCcccchhhhhhcChhhhhhhccc
Confidence 79999997 99999999999998 99999999998776655331 2678999999999999888 4569999875
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 73 t 73 (132)
T d1lssa_ 73 T 73 (132)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.30 E-value=2.6e-06 Score=65.88 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=78.2
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
||.|+||+|.+|++++..|..++- .++.+++..+.....+ +... .........-+ ...+..+.++++|+||.+|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~---~~~~~~~~~~~-~~~~~~~~~~~aDivVita 76 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSH---IETRATVKGYL-GPEQLPDCLKGCDVVVIPA 76 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTT---SSSSCEEEEEE-SGGGHHHHHTTCSEEEECC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhh---hhhhcCCCeEE-cCCChHHHhCCCCEEEECC
Confidence 799999999999999999988722 4688888866433321 1111 11111111112 3456777889999999999
Q ss_pred cccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
|... ....+....+..|+...+.+++.+.+++ .-+|.+-|
T Consensus 77 g~~~--~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 77 GVPR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp SCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CcCC--CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9753 2334566788999999999999999998 44444444
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.27 E-value=1.8e-06 Score=66.87 Aligned_cols=100 Identities=10% Similarity=-0.023 Sum_probs=59.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC---CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP---HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|+||.|.||||++|+.+++.|++++. .+++++.++.+........ .-.....++.+.+ .+.++|+|
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-------~~~~~~~~~~~~~----~~~~~Div 69 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-------GTTGTLQDAFDLE----ALKALDII 69 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-------TCCCBCEETTCHH----HHHTCSEE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-------CCceeeecccchh----hhhcCcEE
Confidence 67999999999999999998887633 4577666554332221110 0011112223322 34679999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
|.++... .+..+...+.+.|.+.+.++..+.|..
T Consensus 70 F~a~~~~------------------~s~~~~~~~~~~g~~~~VID~Ss~fR~ 103 (146)
T d1t4ba1 70 VTCQGGD------------------YTNEIYPKLRESGWQGYWIDAASSLRM 103 (146)
T ss_dssp EECSCHH------------------HHHHHHHHHHHTTCCCEEEECSSTTTT
T ss_pred EEecCch------------------HHHHhhHHHHhcCCCeecccCCccccc
Confidence 9987421 145566666677766555555554544
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=8.2e-06 Score=63.06 Aligned_cols=115 Identities=13% Similarity=0.075 Sum_probs=74.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|||.|+|++|.+|++++..|..+ ...++.+++..+.......+............+ ...+.. +.++++|+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~----~~~~~~-~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF----SGEDAT-PALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE----CSSCCH-HHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE----EcCCCc-cccCCCCEEEE
Confidence 79999999999999999887644 247899998754221111111110011122222 122223 35678999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEeec
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 139 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~Ss 139 (390)
+||... ....+..+.+..|..-.+.+.+...+++ ..+|.+|.
T Consensus 76 taG~~~--k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 76 SAGVRR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp CCSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCccC--CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 999764 2334556778899999999999998887 44555553
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.16 E-value=9.1e-06 Score=62.81 Aligned_cols=113 Identities=14% Similarity=0.104 Sum_probs=74.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhh--hcc-ccccc--cCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKI--KHL-LEPES--QTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~--~~~-~~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
|||.|+||+|.+|++++..|..+ + .++.++++.+... +.. .+... .......+.....-.|. +.++++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~-~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~a 75 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKE-PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDES 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC-TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccc
Confidence 68999999999999999999988 5 5899999875321 111 01000 00112233322111121 356789
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEe
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHF 137 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~ 137 (390)
|+||-+||... ....+....+..|..-.+.+++...+++ +.++.+
T Consensus 76 DvVVitAG~~~--~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 76 DVVIITSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp SEEEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred eEEEEeccccc--CCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 99999999753 3344566788899999999999988887 555444
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.15 E-value=2.4e-06 Score=65.48 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=60.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
|+++|.|+ |-+|+++++.|.+. |++|++++.++.....+.. .+...+.+|.++++.+.++ +.++|+||-+
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~-g~~vvvid~d~~~~~~~~~-------~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~ 71 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRM-GHEVLAVDINEEKVNAYAS-------YATHAVIANATEENELLSLGIRNFEYVIVA 71 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHT-TCCCEEEESCHHHHHHTTT-------TCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHC-CCeEEEecCcHHHHHHHHH-------hCCcceeeecccchhhhccCCccccEEEEE
Confidence 57899975 99999999999999 9999999999887776654 4678899999999999887 6679988865
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 72 ~ 72 (134)
T d2hmva1 72 I 72 (134)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.15 E-value=3.6e-06 Score=67.84 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=60.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
.|+|+|.|| |.+|+++++.|.++ ||+|++++|+......+... .........+..+.......+...|.++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~-g~~V~v~dr~~~~a~~l~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAG-----VQHSTPISLDVNDDAALDAEVAKHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTT-TCEEEEEESCHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEECChHHHHHHHhc-----ccccccccccccchhhhHhhhhccceeEee
Confidence 479999986 99999999999999 99999999999877766542 245556667777778888888889998866
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 75 ~ 75 (182)
T d1e5qa1 75 I 75 (182)
T ss_dssp S
T ss_pred c
Confidence 5
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.11 E-value=9.2e-06 Score=62.92 Aligned_cols=111 Identities=17% Similarity=0.184 Sum_probs=72.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhc----cccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKH----LLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
+.|||.|.|+ |++|+.++..|..+ | .+|+++++.+...+. +..... .........+|+. .+++
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~-~~~~elvL~D~~~~~~~g~a~Dl~~a~~--~~~~~~~~~~d~~-------~~~~ 72 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQ-GIAEEFVIVDVVKDRTKGDALDLEDAQA--FTAPKKIYSGEYS-------DCKD 72 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHGGGG--GSCCCEEEECCGG-------GGTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhc-CCCcEEEEeecccchhHHHHHHHhcccc--ccCCceEeeccHH-------Hhcc
Confidence 3479999995 99999999999998 5 589999988743321 111000 1123344555542 3578
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
+|+||.+|+.... ...+....+..|+.-.+.+++...+++ +-++.+-|
T Consensus 73 adivvitag~~~~--~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 73 ADLVVITAGAPQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp CSEEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred ccEEEEecccccC--CCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 9999999987542 234455677889999999999999888 55555544
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.05 E-value=8e-06 Score=64.05 Aligned_cols=117 Identities=15% Similarity=0.064 Sum_probs=71.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC------eEEEEec--CChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH------KILALDV--YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~------~V~~~~r--~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
++|||.|+||+|++|++++..|...+-. ...+++- ......................+.. .....+.+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 78 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVAF 78 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc----CCchhhhc
Confidence 4679999999999999999999986211 1222222 2222221110000001122222222 23345778
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEee
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFS 138 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~S 138 (390)
+++|+||-++|... ....+..+.+..|+.-.+.+.+...++. ..++.+|
T Consensus 79 ~~advViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 79 KDADYALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ccccEEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 89999999999764 3344666788899999999999888854 3344455
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.00 E-value=5e-05 Score=58.84 Aligned_cols=112 Identities=15% Similarity=0.160 Sum_probs=75.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccc-cccc--cCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLL-EPES--QTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~-~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
.++||.|+|| |.+|++++..|..+ + .++.++++.++..+... +... ......+.+..+|. +.++++
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~-~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~da 75 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQ-GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDA 75 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTC
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhc-CCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccc
Confidence 4579999997 99999999999998 5 47999998775422110 1000 00122344444443 346789
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
|+||.+++... .......+.+..|+.-.+.+++...+++ ..+|.+|
T Consensus 76 Dvvvitag~~~--~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 76 DLVVICAGANQ--KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp SEEEECCSCCC--CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred eeEEEeccccc--ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 99999998764 2334455778889999999999888887 4455544
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.92 E-value=4.5e-05 Score=58.47 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=73.9
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCC--hhhh-ccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 19 TICMIGAGGFIGSHLCEKILLETP-HKILALDVYN--DKIK-HLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~--~~~~-~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
||.|+||+|.+|++++..|..++- .++.+++... .... ...+... ........+..+|.. .++++|+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCEE
Confidence 799999999999999999999832 3688888532 1111 1111100 011234444444432 25689999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+-+||... ....+..+.+..|..-.+.+++...+++ ..++.+|
T Consensus 75 vitaG~~~--~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 75 VITAGIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp EECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred EEeccccc--ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 99999653 3334667788899999999999999988 4445444
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.81 E-value=6.1e-06 Score=66.55 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=30.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
|+||.|.|||||+|+.|++.|.+.|.+++..+..
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~ 34 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTV 34 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence 7899999999999999999999987888876643
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.81 E-value=2.8e-05 Score=62.73 Aligned_cols=77 Identities=16% Similarity=0.073 Sum_probs=54.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
++.+|||+||+|-+|...++..... |.+|+++++++++.+.+.+. ....-+..-|-...+.+.+... ++|+|
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~-----Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v 102 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI-----GFDAAFNYKTVNSLEEALKKASPDGYDCY 102 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-----TCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHcc-CCEEEEeCCCHHHHHHHHhh-----hhhhhcccccccHHHHHHHHhhcCCCcee
Confidence 5689999999999999999999998 99999999988766655542 1122222233333333333333 49999
Q ss_pred EEecc
Q 016370 94 INLAA 98 (390)
Q Consensus 94 ih~a~ 98 (390)
|++.|
T Consensus 103 ~D~vG 107 (182)
T d1v3va2 103 FDNVG 107 (182)
T ss_dssp EESSC
T ss_pred EEecC
Confidence 99986
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.79 E-value=1.1e-05 Score=64.39 Aligned_cols=116 Identities=14% Similarity=-0.020 Sum_probs=73.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhC--C----CeEEEEecCChhh--hcccc-ccccCCCCCeeEEeCCCCChhHHHHh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLET--P----HKILALDVYNDKI--KHLLE-PESQTGADRIQFHRLNIKHDSRLEGL 86 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~--g----~~V~~~~r~~~~~--~~~~~-~~~~~~~~~i~~~~~D~~d~~~~~~~ 86 (390)
++.||.|+||+|.||++++..|.+.. | ..+..++...... +.+.. .... .......+. -..+..+.
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~-a~~~~~~~~----~~~~~~~~ 97 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDS-LYPLLREVS----IGIDPYEV 97 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-TCTTEEEEE----EESCHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccc-ccccccCcc----ccccchhh
Confidence 34589999999999999999998741 1 2455666544221 11110 0000 011221111 11235677
Q ss_pred hccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC---CcEEEee
Q 016370 87 IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFS 138 (390)
Q Consensus 87 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~v~~S 138 (390)
++++|+||-+||... .......+.+..|..-.+.+.+++.++. .+++.+|
T Consensus 98 ~~~aDvVvi~ag~~r--kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 98 FEDVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp TTTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ccCCceEEEeeccCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 889999999998753 4455677888999999999999998864 3455555
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.78 E-value=3.5e-05 Score=59.32 Aligned_cols=94 Identities=12% Similarity=0.036 Sum_probs=53.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC---CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP---HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|||.|.|||||+|+.|++.|++++. .++..+..+....+.... ... .....+..+. ..++++|+||
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~------~~~-~~~~~~~~~~----~~~~~~DvvF 69 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNF------GKD-AGMLHDAFDI----ESLKQLDAVI 69 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCS------SSC-CCBCEETTCH----HHHTTCSEEE
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccccc------CCc-ceeeecccch----hhhccccEEE
Confidence 6899999999999999999987533 456555443322111100 000 0011112222 3356799999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCc--EEEeecc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR--LIHFSTC 140 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~v~~Ss~ 140 (390)
.+.... -+..+...+.+.|++ +|=.|+.
T Consensus 70 ~alp~~------------------~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 70 TCQGGS------------------YTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp ECSCHH------------------HHHHHHHHHHHTTCCSEEEESSST
T ss_pred EecCch------------------HHHHHhHHHHHcCCceEEEeCCcc
Confidence 887421 145566666777744 5555553
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.76 E-value=7.4e-05 Score=57.36 Aligned_cols=111 Identities=17% Similarity=0.222 Sum_probs=68.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-ccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+||.|+|+ |.+|+.++..|+.++- .++.++++.++..+.. .+... ...........+| .+.++++|+|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence 47999997 9999999999999722 4799999877543211 11110 0111223322222 23467899999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-C-cEEEee
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K-RLIHFS 138 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-~~v~~S 138 (390)
-+||... ....+....+..|+.-.+.+++.+.+++ + .+|.+|
T Consensus 74 itag~~~--~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 74 VTAGANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp ECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred Eeccccc--CcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 9998664 2334566778899999999999998887 3 344444
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.75 E-value=2.1e-05 Score=60.70 Aligned_cols=95 Identities=14% Similarity=0.103 Sum_probs=56.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+|+|.|.||||++|+.|++.|.++ +..++..+..+.+.-+..... .-+....++. ...+.++|+||
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-------~~~~~~~~~~-----~~~~~~~d~vf 69 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-------ESSLRVGDVD-----SFDFSSVGLAF 69 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-------TEEEECEEGG-----GCCGGGCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-------cccchhccch-----hhhhccceEEE
Confidence 478999999999999999999754 456777765544332222110 1111111111 12345689999
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccc
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~ 141 (390)
.++... .+..+...+.+.+.++|=.|+..
T Consensus 70 ~a~p~~------------------~s~~~~~~~~~~g~~VID~Ss~f 98 (144)
T d2hjsa1 70 FAAAAE------------------VSRAHAERARAAGCSVIDLSGAL 98 (144)
T ss_dssp ECSCHH------------------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred ecCCcc------------------hhhhhccccccCCceEEeechhh
Confidence 776421 13445555666667777777753
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.74 E-value=1.8e-05 Score=61.03 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=72.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccc-ccccc--CCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLL-EPESQ--TGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~-~~~~~--~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|| |.+|++++..|... + .++.+++..+....... ..... .......+... .+. +.++++|+
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~-~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadv 72 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEK-QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhC-CCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeE
Confidence 68999996 99999999999987 5 58999998875433211 10000 00112233221 122 34678999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEe
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHF 137 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~ 137 (390)
|+-+||... ....+....+..|..-.+.+++...+++ .-++.+
T Consensus 73 vvitag~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv 116 (142)
T d1guza1 73 VIITAGLPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV 116 (142)
T ss_dssp EEECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred EEEEEecCC--CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence 999998753 2334556778889999999999888877 334433
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.72 E-value=2.7e-05 Score=60.79 Aligned_cols=118 Identities=16% Similarity=0.130 Sum_probs=75.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc-cccc--cCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPES--QTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+.+||.|.|+ |.+|+.++..|...+-.++++++.++....... +... ........ +......++.++++|+
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-----~~~~~~~~~~~~~adi 79 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-----VRAEYSYEAALTGADC 79 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-----EEEECSHHHHHTTCSE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeE-----EeccCchhhhhcCCCe
Confidence 4579999997 999999999888873358999998765332211 0000 00000111 1112335667789999
Q ss_pred EEEeccccCCcc---ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 93 TINLAAICTPAD---YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
|+-+++....+. ........+..|+.-.+.+++.+.+++ .-++.+-|
T Consensus 80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999998764321 112455678889999999999999888 44444444
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.72 E-value=0.00012 Score=56.00 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=73.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccc-ccc-ccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLL-EPE-SQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~-~~~-~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
|||.|.|+ |.+|++++..|+.+ + .++.+++..+....... +.. ............+|. +.++++|+|
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~-~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adiv 71 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMK-GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVV 71 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhC-CCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEE
Confidence 69999996 99999999999887 4 57999998764432110 000 000112334443332 236789999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
|-+|+.... ......+.+..|..-.+.+++...+.+ .-++.+-|
T Consensus 72 vitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 72 IVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp EECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEecccccC--CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence 999987542 234455677889999999999998887 44444443
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.67 E-value=1.6e-05 Score=64.92 Aligned_cols=40 Identities=18% Similarity=0.320 Sum_probs=36.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL 58 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~ 58 (390)
|||.|+||+|.+|++|++.|.+. ||+|.+.+|++++.+.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~-G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAK 40 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 78999999999999999999999 99999999988765544
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.66 E-value=3.9e-05 Score=61.14 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=53.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
++.+|||+||+|-+|...++.+... |.+|+++++++++.+...+. +.+.+ .|..+........+++|+||+
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~-G~~vi~~~~~~~~~~~~~~l-------Ga~~~-i~~~~~~~~~~~~~g~D~v~d 97 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL-------GAEEA-ATYAEVPERAKAWGGLDLVLE 97 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT-------TCSEE-EEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEEeccccchhhhhhhhccc-cccccccccccccccccccc-------cccee-eehhhhhhhhhcccccccccc
Confidence 5689999999999999999999888 99999999887766555442 33222 234443333333456999999
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+.|
T Consensus 98 ~~G 100 (171)
T d1iz0a2 98 VRG 100 (171)
T ss_dssp CSC
T ss_pred ccc
Confidence 876
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.63 E-value=4e-05 Score=59.91 Aligned_cols=117 Identities=15% Similarity=0.049 Sum_probs=69.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhC--C----CeEEEEecCChhh--hccccccccCCCCCeeEEeCCCCChhHHHHhh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLET--P----HKILALDVYNDKI--KHLLEPESQTGADRIQFHRLNIKHDSRLEGLI 87 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~--g----~~V~~~~r~~~~~--~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~ 87 (390)
++|||.|+||+|.+|++++..|.... + .+++.++...... +.+..............+.. ..+..+.+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 77 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAF 77 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----Cccccccc
Confidence 46799999999999999999998641 1 2355555443221 11100000000112221111 22355677
Q ss_pred ccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhC-CC--cEEEee
Q 016370 88 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-NK--RLIHFS 138 (390)
Q Consensus 88 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~--~~v~~S 138 (390)
+++|+||-++|.... ...+....+..|..-.+.+.+...++ ++ .+|.+|
T Consensus 78 ~~~dvVVitag~~~~--~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 78 KDLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp TTCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CCceEEEEecccCCC--CCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 889999999987643 23344567888999999998887665 43 344444
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.62 E-value=0.00039 Score=54.14 Aligned_cols=113 Identities=14% Similarity=0.122 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcc-ccccc--cCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHL-LEPES--QTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~-~~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
++.+||.|.|+ |.+|+.++..|..+ |. ++.++++.++..... .+... ...........+|+. .+++
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~-~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~-------~~~~ 88 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGK-SLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS-------VTAN 88 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG-------GGTT
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhc-CCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh-------hccc
Confidence 44579999996 99999999999998 53 799999876443211 11000 001112222223322 3568
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+|+||.+||.... ...+....+..|+.-.+.++....+.+ .-+|.+|
T Consensus 89 adiVVitAg~~~~--~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 89 SKIVVVTAGVRQQ--EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp CSEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccEEEEecCCccc--cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9999999997642 334556788899999999999888887 3455555
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.61 E-value=1.9e-05 Score=62.90 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=31.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
|+||.|.||||++|+.|++.|.+.+.+++..+..+.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~ 36 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT 36 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence 689999999999999999999987778887776544
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.61 E-value=8.7e-05 Score=57.96 Aligned_cols=120 Identities=17% Similarity=0.157 Sum_probs=76.1
Q ss_pred CCCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-cccccc--CCCCCeeEEeCCCCChhHHH
Q 016370 9 DLDGRPIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPESQ--TGADRIQFHRLNIKHDSRLE 84 (390)
Q Consensus 9 ~~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~~--~~~~~i~~~~~D~~d~~~~~ 84 (390)
-+++..++..||.|+|+ |.+|++++..|..++- .++.++++.++..... .+.... ...........|.
T Consensus 11 ~~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~------- 82 (159)
T d2ldxa1 11 LVPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY------- 82 (159)
T ss_dssp CSSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------
T ss_pred hcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------
Confidence 35556677789999996 9999999999998822 4799999876543211 111000 0111222222232
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC--CcEEEee
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFS 138 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~v~~S 138 (390)
+.+.++|+||-+||....+ ..+....+..|+.-.+.++....+.+ ..++.+|
T Consensus 83 ~~~~~adivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 83 NVSANSKLVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp GGGTTEEEEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred hhhccccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence 2346799999999876432 23344567789888888888777777 4455555
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.58 E-value=0.00043 Score=52.90 Aligned_cols=111 Identities=13% Similarity=0.152 Sum_probs=73.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhcc-ccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHL-LEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~-~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.||.|+|+ |.+|++++..|..+ + .++.++++.+...+.. .+... ........+... +++ +.++++|+|
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~-~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~-----~~~-~~~~daDvV 73 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQR-GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-----DDP-EICRDADMV 73 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-----SCG-GGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhc-CCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC-----CCH-HHhhCCcEE
Confidence 58999996 99999999999988 5 4799999887543221 00000 001122233221 112 235679999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcE-EEee
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRL-IHFS 138 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~-v~~S 138 (390)
|-+||... ....+..+.+..|..-.+.+++...+++ .-+ |.+|
T Consensus 74 VitaG~~~--~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 74 VITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp EECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEeccccc--CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 99999754 3345566788899999999999888888 444 4444
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.57 E-value=0.00022 Score=54.86 Aligned_cols=113 Identities=12% Similarity=0.075 Sum_probs=70.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCChhhhccc-cccc--cCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP--HKILALDVYNDKIKHLL-EPES--QTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~-~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|+ |.+|+.++..|+.+ | .++++++..+....... +... ...........+|. +.++++|+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~-~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adi 72 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQ-GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADV 72 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSE
T ss_pred CeEEEECc-CHHHHHHHHHHHhc-CCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccE
Confidence 69999995 99999999999988 5 57999998765432111 0000 00112233333332 23578999
Q ss_pred EEEeccccCCcc--ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 93 TINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
||-+||...... ...+....+..|+.-.+.+++..++.+ .-++.+-|
T Consensus 73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt 122 (146)
T d1hyha1 73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (146)
T ss_dssp EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence 999998653211 112233456789999999999998888 44444443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=0.00014 Score=60.27 Aligned_cols=77 Identities=9% Similarity=0.103 Sum_probs=55.8
Q ss_pred CCCCCEEEEEcC----------------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC
Q 016370 14 PIKPVTICMIGA----------------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77 (390)
Q Consensus 14 ~~~~~~vlItGa----------------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~ 77 (390)
.+.+|+||||+| ||..|.+|++.+..+ |++|+++....+... ...+..+...-
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~-Ga~V~li~g~~~~~~----------p~~~~~~~~~t 71 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR-GANVTLVSGPVSLPT----------PPFVKRVDVMT 71 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT-TCEEEEEECSCCCCC----------CTTEEEEECCS
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHc-CCchhhhhcccccCc----------ccccccceehh
Confidence 567889999886 799999999999999 999999987543211 24566655432
Q ss_pred CC--hhHHHHhhccccEEEEeccccC
Q 016370 78 KH--DSRLEGLIKMADLTINLAAICT 101 (390)
Q Consensus 78 ~d--~~~~~~~~~~~d~Vih~a~~~~ 101 (390)
.+ .+.+...+.++|++|++|+..+
T Consensus 72 ~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 72 ALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred hHHHHHHHHhhhccceeEeeeechhh
Confidence 21 1233444567999999999885
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.56 E-value=4.2e-05 Score=60.47 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=34.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH 57 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~ 57 (390)
|||+|.|+ |.+|+.++..|.+. |++|.+++|.+.....
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~-G~~V~~~~r~~~~~~~ 38 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQ-GHEVQGWLRVPQPYCS 38 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSSCCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHHC-CCceEEEEcCHHHhhh
Confidence 79999997 99999999999998 9999999998765443
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.55 E-value=0.00055 Score=52.24 Aligned_cols=112 Identities=19% Similarity=0.158 Sum_probs=73.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-cccccc--CCCCCeeEEe-CCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-LEPESQ--TGADRIQFHR-LNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-~~~~~~--~~~~~i~~~~-~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|+|+ |.+|++++..|..++- .++.+++..++..... .+.... .......+.. .|+ +.++++|+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~adi 72 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhccccE
Confidence 79999996 9999999999998822 4699999877543221 000000 0011222222 222 25678999
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
||-.|+... ....+..+.+..|..-.+.+++...+++ .-++.+-|
T Consensus 73 Vvitag~~~--~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 73 IVVTAGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp EEECCCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EEEeccccC--CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 999998654 3334566788899999999999999888 44444444
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.55 E-value=0.00016 Score=56.60 Aligned_cols=74 Identities=14% Similarity=0.175 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+++++|||.|+ |-+|+.+++.|... |. +++++.|+.+....+.... +.. ..+.+++.+.+.++|+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~-g~~~i~v~nRt~~ka~~l~~~~------~~~-----~~~~~~~~~~l~~~Di 87 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDL------GGE-----AVRFDELVDHLARSDV 87 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHH------TCE-----ECCGGGHHHHHHTCSE
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhc-CCcEEEEEcCcHHHHHHHHHhh------hcc-----cccchhHHHHhccCCE
Confidence 467889999997 99999999999999 76 6889999876655443321 122 2245678888899999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||.+.+..
T Consensus 88 vi~atss~ 95 (159)
T d1gpja2 88 VVSATAAP 95 (159)
T ss_dssp EEECCSSS
T ss_pred EEEecCCC
Confidence 99997643
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.53 E-value=9.7e-05 Score=58.35 Aligned_cols=65 Identities=15% Similarity=0.232 Sum_probs=45.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||.|.| .|.+|+.+++.|.++ |++|++++|+++..+...+. ..+....- ..++++++|+||-+.
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~-g~~V~~~d~~~~~~~~a~~~------~~~~~~~~-------~~~~~~~~DiIilav 65 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVER------QLVDEAGQ-------DLSLLQTAKIIFLCT 65 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT------TSCSEEES-------CGGGGTTCSEEEECS
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHh------hccceeee-------ecccccccccccccC
Confidence 6899997 599999999999998 99999999987665544332 11111111 123567899998543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=0.00033 Score=49.32 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+++|+|+|.|. |-.|..+++.|.++ |++|++.+.+......... ...+.+..+... . ..+.++|.|
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~-g~~v~~~D~~~~~~~~~~~------~~~~~~~~~~~~-~----~~~~~~d~v 68 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLAR-GVTPRVMDTRMTPPGLDKL------PEAVERHTGSLN-D----EWLMAADLI 68 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHT-TCCCEEEESSSSCTTGGGS------CTTSCEEESBCC-H----HHHHHCSEE
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHC-CCEEEEeeCCcCchhHHHH------hhccceeecccc-h----hhhccCCEE
Confidence 467899999997 66899999999999 9999999986643221110 134555555432 2 234568999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-.-|..
T Consensus 69 i~SPGi~ 75 (93)
T d2jfga1 69 VASPGIA 75 (93)
T ss_dssp EECTTSC
T ss_pred EECCCCC
Confidence 9877653
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.47 E-value=2.7e-05 Score=62.78 Aligned_cols=38 Identities=18% Similarity=0.369 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
.+.+||.|.|||||+|+.|++.|.+.|.+++..+..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~ 40 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADR 40 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECST
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccc
Confidence 34568999999999999999999998888887775433
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.46 E-value=0.00021 Score=57.28 Aligned_cols=78 Identities=18% Similarity=0.191 Sum_probs=52.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccc-cCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|||.|.|+ |.+|..++..|.++ ||+|.+++|+++....+..... .......+..........++.++++++|+||-+
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CEEEEECc-cHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 79999996 99999999999999 9999999998765544332100 000111222222222223477888899999986
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 80 v 80 (184)
T d1bg6a2 80 V 80 (184)
T ss_dssp S
T ss_pred E
Confidence 5
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.42 E-value=0.0003 Score=53.83 Aligned_cols=112 Identities=16% Similarity=0.119 Sum_probs=67.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc-cccccc--CCCCCeeEE-eCCCCChhHHHHhhccccEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL-LEPESQ--TGADRIQFH-RLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-~~~~~~--~~~~~i~~~-~~D~~d~~~~~~~~~~~d~V 93 (390)
+||.|+|+ |.+|+.++..|..++-.++.+++..++..... .+.... .......+. ..|+ + .++++|+|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~------~-~~~~advv 73 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY------A-DTANSDVI 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG------G-GGTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH------H-HhcCCCEE
Confidence 58999996 99999999999888335899999876543221 110000 000112222 1222 2 24679999
Q ss_pred EEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 94 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 94 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
|-+||.... ...+..+.+..|..-.+.+++...+++ .-++.+-|
T Consensus 74 vitag~~~~--~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 74 VVTSGAPRK--PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp EECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred EEeeeccCC--cCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence 999997642 223444667789999999999998887 44444433
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00016 Score=57.57 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=52.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH---hhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG---LIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~---~~~--~~ 90 (390)
.+.+|||+||+|-+|...++.+... |.+|+++++++++.....+. +...+ .|.++.+..+. ... ++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~-G~~vi~~~~~~~~~~~~~~~-------Ga~~v-i~~~~~~~~~~i~~~t~~~g~ 98 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN-------GAHEV-FNHREVNYIDKIKKYVGEKGI 98 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-------TCSEE-EETTSTTHHHHHHHHHCTTCE
T ss_pred CCCEEEEEecccccccccccccccc-Cccccccccccccccccccc-------Ccccc-cccccccHHHHhhhhhccCCc
Confidence 5679999999999999999999888 99999999877665554432 22222 25555443333 322 39
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||++.+
T Consensus 99 d~v~d~~g 106 (174)
T d1yb5a2 99 DIIIEMLA 106 (174)
T ss_dssp EEEEESCH
T ss_pred eEEeeccc
Confidence 99999876
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.39 E-value=9.8e-05 Score=60.48 Aligned_cols=81 Identities=14% Similarity=0.223 Sum_probs=52.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCee------EEeCCCCChhHHHHhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ------FHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~------~~~~D~~d~~~~~~~~~~~d 91 (390)
|||.|.| .||+|..++..|.++ |++|++++.++.....+.....+...+... .....+.-..++.++++++|
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~-g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d 78 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEEC-CCHhHHHHHHHHHhC-CCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence 7899996 999999999999999 999999999877666554321110000000 00001111234566677899
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
++|-|....
T Consensus 79 ~i~i~VpTP 87 (202)
T d1mv8a2 79 VSFICVGTP 87 (202)
T ss_dssp EEEECCCCC
T ss_pred EEEEecCcc
Confidence 999988653
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=6.7e-05 Score=58.90 Aligned_cols=100 Identities=16% Similarity=0.239 Sum_probs=61.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+||+|.|++|-+|+.+++.+.+.++.++.+. +|...+.... .... ..+.. ..++.-.+++..++..+|+||.
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~---~~~~~--~~~~~~~~~~~~~~~~~DViID 77 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGE---LAGAG--KTGVTVQSSLDAVKDDFDVFID 77 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTC---SSSSS--CCSCCEESCSTTTTTSCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhh---hhccc--cCCceeeccHHHHhcccceEEE
Confidence 36899999999999999999999767886554 4433221100 0000 00000 0111112334456677999999
Q ss_pred eccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 96 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
+.- -.++...++.|.+++..+|.-+|.
T Consensus 78 Fs~------------------p~~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 78 FTR------------------PEGTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp CSC------------------HHHHHHHHHHHHHTTCEEEECCCC
T ss_pred ecc------------------HHHHHHHHHHHHhccceeEEecCC
Confidence 863 123667888999998888876663
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.35 E-value=0.00035 Score=52.29 Aligned_cols=72 Identities=17% Similarity=0.260 Sum_probs=52.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|||.|.|++|-+|+.|++.+.++ ++++.+. ++.. ...+..+|+||.+
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~-~~~l~~~id~~~-------------------------------~~~~~~~DVvIDF 48 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK-GHELVLKVDVNG-------------------------------VEELDSPDVVIDF 48 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEETTE-------------------------------EEECSCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHhcC-CCeEEEEECCCc-------------------------------HHHhccCCEEEEe
Confidence 68999999999999999888777 8887653 2211 0113458999988
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
... .++...++.|.+++..+|.-+|
T Consensus 49 S~p------------------~~~~~~l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 49 SSP------------------EALPKTVDLCKKYRAGLVLGTT 73 (128)
T ss_dssp SCG------------------GGHHHHHHHHHHHTCEEEECCC
T ss_pred cCH------------------HHHHHHHHHHHhcCCCEEEEcC
Confidence 642 2367788899999877776666
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.0007 Score=49.18 Aligned_cols=67 Identities=15% Similarity=0.300 Sum_probs=54.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc--ccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM--ADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~--~d~Vih 95 (390)
.||.|.| +|.+|+-++....+. |+++++++..+....... .-+++.+|+.|.+.+.++... +|+|-.
T Consensus 12 ~kigIlG-gGQL~rMla~aA~~l-G~~v~v~d~~~~~PA~~v---------a~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 12 TRVMLLG-SGELGKEVAIECQRL-GVEVIAVDRYADAPAMHV---------AHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTT-TCEEEEEESSTTCGGGGG---------SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEe-CCHHHHHHHHHHHHC-CCEEEEEcCCCCCchhhc---------CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 5899999 899999999999999 999999998765443211 236788999999999988764 788863
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.34 E-value=0.00022 Score=57.23 Aligned_cols=74 Identities=14% Similarity=0.085 Sum_probs=53.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+.+|||+||+|-+|...++.+... |.+|+++++++++...+.+. +...+ .|..+.+ .+.+... ++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~-g~~vi~~~~~~~~~~~l~~~-------Ga~~v-i~~~~~~~~~~v~~~t~~~g~ 95 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRL-------GVEYV-GDSRSVDFADEILELTDGYGV 95 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTT-------CCSEE-EETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCCcccccchhhccc-cccceeeecccccccccccc-------ccccc-ccCCccCHHHHHHHHhCCCCE
Confidence 4679999999999999999999888 99999999887666555442 33332 2444443 3333332 49
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||++.+
T Consensus 96 d~v~d~~g 103 (183)
T d1pqwa_ 96 DVVLNSLA 103 (183)
T ss_dssp EEEEECCC
T ss_pred EEEEeccc
Confidence 99999886
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.29 E-value=0.00042 Score=53.70 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK 56 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 56 (390)
..++||.|.||.|.+|+.+++.|.++ ||+|.+++|......
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~-G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDWAVA 47 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCGGGH
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHc-CCCcEeccccccccc
Confidence 35679999999999999999999999 999999999875443
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.00032 Score=55.99 Aligned_cols=74 Identities=14% Similarity=0.124 Sum_probs=54.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh---HHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS---RLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~---~~~~~~~--~~ 90 (390)
.+.+|||+||+|-+|..+++.+... |.+|+++++++.+.+...+. +...+ .|..+.+ .+.++-. ++
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~-Ga~Vi~~~~s~~k~~~~~~l-------Ga~~v-i~~~~~d~~~~v~~~t~g~g~ 98 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA-------GAWQV-INYREEDLVERLKEITGGKKV 98 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH-------TCSEE-EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEEccccccchHHHHHHHHh-CCeEeecccchHHHHHHHhc-------CCeEE-EECCCCCHHHHHHHHhCCCCe
Confidence 4679999999999999999999998 99999999998877665543 33322 2555544 3333332 38
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+||.+.+
T Consensus 99 d~v~d~~g 106 (179)
T d1qora2 99 RVVYDSVG 106 (179)
T ss_dssp EEEEECSC
T ss_pred EEEEeCcc
Confidence 99999886
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.20 E-value=0.0016 Score=48.62 Aligned_cols=90 Identities=14% Similarity=0.234 Sum_probs=60.8
Q ss_pred CCCCCCEEEEEcCc---hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 13 RPIKPVTICMIGAG---GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 13 ~~~~~~~vlItGat---G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
.-+++++|.|.||| |..|..+.+.|++.+.++|+.+..+..... ++..+ -+ +.++-..
T Consensus 4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~------------G~~~y-~s------l~dlp~~ 64 (129)
T d2csua1 4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ------------GVKAY-KS------VKDIPDE 64 (129)
T ss_dssp TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET------------TEECB-SS------TTSCSSC
T ss_pred HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC------------CeEee-cc------hhhcCCC
Confidence 35788999999999 999999999987652378999876543222 22221 12 3333345
Q ss_pred ccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 90 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 90 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
+|.++-+.. -..+..+++.|.+.| +.++.+|+
T Consensus 65 vDlvvi~vp------------------~~~~~~~~~~~~~~g~~~~vi~s~ 97 (129)
T d2csua1 65 IDLAIIVVP------------------KRFVKDTLIQCGEKGVKGVVIITA 97 (129)
T ss_dssp CSEEEECSC------------------HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred CceEEEecC------------------hHHhHHHHHHHHHcCCCEEEEecc
Confidence 899886652 122566788888888 77777776
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00014 Score=49.00 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=36.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL 58 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~ 58 (390)
++++|||+||+|-+|...++.+... |++|+++.+++++.+.+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~-G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHc-CCeEEEEECCHHHHHHH
Confidence 4678999999999999999988887 99999999988765543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.17 E-value=0.00083 Score=52.92 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEe-CCCCChhHHHHhhc-----c
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR-LNIKHDSRLEGLIK-----M 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~-~D~~d~~~~~~~~~-----~ 89 (390)
.+.+|+|+| +|-+|...++.+... |.+|+++++++.+.+...+. .....+.. ..-.+.+.+.+.++ +
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~-Ga~vi~v~~~~~r~~~a~~~-----ga~~~~~~~~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC-----GADVTLVVDPAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT-----TCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhh-cccccccchHHHHHHHHHHc-----CCcEEEeccccccccchhhhhhhcccccC
Confidence 456899997 688999999888877 89999999998776655442 12222221 11223333433332 3
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+++.
T Consensus 99 ~D~vid~~g~ 108 (170)
T d1e3ja2 99 PNVTIDCSGN 108 (170)
T ss_dssp CSEEEECSCC
T ss_pred CceeeecCCC
Confidence 9999999873
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.16 E-value=0.00048 Score=54.34 Aligned_cols=76 Identities=13% Similarity=0.033 Sum_probs=53.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|+|+|+ |-+|...++.+... |.+|+++++++.+.+...+. +...+.-...+.+..+....++|+||.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a~~l-------Ga~~~i~~~~~~~~~~~~~~~~d~vi~ 97 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM-------GADHYIATLEEGDWGEKYFDTFDLIVV 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-------TCSEEEEGGGTSCHHHHSCSCEEEEEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhc-cccccccccchhHHHHhhcc-------CCcEEeeccchHHHHHhhhcccceEEE
Confidence 5679999996 89999999888887 99999999988776655443 232222112233445555566999999
Q ss_pred ecccc
Q 016370 96 LAAIC 100 (390)
Q Consensus 96 ~a~~~ 100 (390)
+.+..
T Consensus 98 ~~~~~ 102 (168)
T d1piwa2 98 CASSL 102 (168)
T ss_dssp CCSCS
T ss_pred EecCC
Confidence 87654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.15 E-value=0.0016 Score=50.02 Aligned_cols=115 Identities=15% Similarity=0.129 Sum_probs=70.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc-cccc--cCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPES--QTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~--~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+||.|.|+ |.+|++++..|...+=.++.++++.+....... +... ........+...+ ..+.++++|+||
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~------~~~~~~~advvv 76 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN------TYDDLAGADVVI 76 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC------CGGGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc------cccccCCCcEEE
Confidence 58999995 999999998777663257999998764432211 0000 0000122222211 123457799999
Q ss_pred EeccccCCcc---ccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 95 NLAAICTPAD---YNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 95 h~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
-+++....+. ...+....+..|..-.+.+++...+.+ .-++.+-|
T Consensus 77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt 125 (150)
T d1t2da1 77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 125 (150)
T ss_dssp ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999764321 112345668899999999999998888 44444433
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.13 E-value=0.00024 Score=55.78 Aligned_cols=66 Identities=17% Similarity=0.278 Sum_probs=51.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEe
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINL 96 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~ 96 (390)
|++|.|.| .|.+|+.++++|+++ ||+|++.+|++.....+... + ........+++..+|+|+-+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~-g~~v~~~d~~~~~~~~~~~~-------~-------~~~~~~~~e~~~~~diii~~ 64 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAA-------G-------ASAARSARDAVQGADVVISM 64 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHT-------T-------CEECSSHHHHHTSCSEEEEC
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHC-CCeEEEEECchhhhhhhhhh-------h-------ccccchhhhhccccCeeeec
Confidence 67899997 899999999999999 99999999998776655432 1 11123466777889999987
Q ss_pred cc
Q 016370 97 AA 98 (390)
Q Consensus 97 a~ 98 (390)
..
T Consensus 65 v~ 66 (162)
T d3cuma2 65 LP 66 (162)
T ss_dssp CS
T ss_pred cc
Confidence 63
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.13 E-value=0.0002 Score=55.74 Aligned_cols=23 Identities=22% Similarity=0.476 Sum_probs=20.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE 40 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~ 40 (390)
=||.|.|||||+|+.|++.|.+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H 24 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEES 24 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC
T ss_pred CEEEEECCCcHHHHHHHHHHHcC
Confidence 37999999999999999988776
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.11 E-value=0.00011 Score=59.50 Aligned_cols=81 Identities=14% Similarity=0.170 Sum_probs=54.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccc-ccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE-SQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.|.|+||.|.| +|..|++++..|.+. |++|.+.+|+++....+.... +....+++.+ .-++.-..+++++++++|+
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~-g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~ 80 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKK-CREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEI 80 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTT-EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSC
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHc-CCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCE
Confidence 45677899999 789999999999998 999999999876554332211 1111122221 1122223468888999999
Q ss_pred EEEec
Q 016370 93 TINLA 97 (390)
Q Consensus 93 Vih~a 97 (390)
||-+.
T Consensus 81 iiiav 85 (189)
T d1n1ea2 81 ILFVI 85 (189)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 98754
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00065 Score=52.61 Aligned_cols=74 Identities=9% Similarity=0.039 Sum_probs=56.8
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccEEEEec
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLTINLA 97 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~Vih~a 97 (390)
+|+|+|. |-+|..+++.|.++ |++|++++..++......... ...++.++.||.++++.++++-- ++++||-+.
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~-~~~v~vId~d~~~~~~~~~~~---~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQR---LGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHH---HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred EEEEECC-CHHHHHHHHHHHHc-CCCEEEEeccchhHHHHHHHh---hcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence 6899996 89999999999999 999999998775432211110 12589999999999998876644 599998765
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.07 E-value=0.00024 Score=55.78 Aligned_cols=64 Identities=16% Similarity=0.319 Sum_probs=50.4
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||.|.| .|.+|+.+++.|+++ ||+|++.+|+++....+... +... .+...++++++|+||-|.
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~-------~~~~-------~~~~~e~~~~~d~ii~~v 64 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAA-------GAET-------ASTAKAIAEQCDVIITML 64 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-------TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-hhHHHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHh-------hhhh-------cccHHHHHhCCCeEEEEc
Confidence 6899998 799999999999998 99999999998876665442 2221 134567778899999875
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.03 E-value=0.00047 Score=55.17 Aligned_cols=86 Identities=14% Similarity=0.156 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccccc-CCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ-TGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+++++|+|.|+ |-.|+.++..|.+.+..+++++.|+++....+...... ...-.......++.+.+.+...+..+|+
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di 93 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI 93 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence 467899999996 66789999999998335789999987654432211000 0001234556788898889999999999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
|||+....
T Consensus 94 iIN~Tp~G 101 (182)
T d1vi2a1 94 LTNGTKVG 101 (182)
T ss_dssp EEECSSTT
T ss_pred eccccCCc
Confidence 99997543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.02 E-value=0.00033 Score=55.73 Aligned_cols=74 Identities=9% Similarity=-0.070 Sum_probs=49.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh-hHHHHhhc--cccE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD-SRLEGLIK--MADL 92 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~-~~~~~~~~--~~d~ 92 (390)
.+.+|||+||+|-+|+..++.+... |.+|+++.+++.+.....+. +...+. |..+. ++...... ++|+
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~-Ga~Viat~~s~~k~~~~~~l-------Ga~~vi-~~~~~~~~~~~~~~~~gvD~ 101 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL-------GAKEVL-AREDVMAERIRPLDKQRWAA 101 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT-------TCSEEE-ECC---------CCSCCEEE
T ss_pred CCCEEEEEeccchHHHHHHHHHHHc-CCceEEecCchHHHHHHHhc-------ccceee-ecchhHHHHHHHhhccCcCE
Confidence 3568999999999999999999998 99999999988777665543 222211 22211 11222222 4999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||++.+
T Consensus 102 vid~vg 107 (176)
T d1xa0a2 102 AVDPVG 107 (176)
T ss_dssp EEECST
T ss_pred EEEcCC
Confidence 999886
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.01 E-value=0.00052 Score=53.13 Aligned_cols=64 Identities=9% Similarity=0.039 Sum_probs=46.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||.|.| .|.+|+.+++.|+++ |++|++.++.++........ ++.+. +...++++.+|+||-+.
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~-------~~~~~-------~~~~e~~~~~diIi~~v 64 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSR-GVEVVTSLEGRSPSTIERAR-------TVGVT-------ETSEEDVYSCPVVISAV 64 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHT-TCEEEECCTTCCHHHHHHHH-------HHTCE-------ECCHHHHHTSSEEEECS
T ss_pred CEEEEEc-HHHHHHHHHHHHHHC-CCeEEEEcCchhHHHHHhhh-------ccccc-------ccHHHHHhhcCeEEEEe
Confidence 6899997 799999999999999 99999998876554433221 11111 12456678899999775
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.98 E-value=0.0032 Score=45.75 Aligned_cols=95 Identities=7% Similarity=0.030 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
.+++++|||.| +|-+|..-++.|++. |.+|++++....+. ..+.. ..++++....+.+.+ +.+++.
T Consensus 9 ~l~~k~vlVvG-~G~va~~ka~~ll~~-ga~v~v~~~~~~~~~~~~~~------~~~i~~~~~~~~~~d-----l~~~~l 75 (113)
T d1pjqa1 9 QLRDRDCLIVG-GGDVAERKARLLLEA-GARLTVNALTFIPQFTVWAN------EGMLTLVEGPFDETL-----LDSCWL 75 (113)
T ss_dssp CCBTCEEEEEC-CSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHHT------TTSCEEEESSCCGGG-----GTTCSE
T ss_pred EeCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeccCChHHHHHHh------cCCceeeccCCCHHH-----hCCCcE
Confidence 35789999999 788999999999999 99999988765432 22222 246788877776543 567888
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
|+-+.+ ++. . ...+.+.|++.+ .+|++..
T Consensus 76 v~~at~---------d~~----~----n~~i~~~a~~~~-ilVNv~D 104 (113)
T d1pjqa1 76 AIAATD---------DDT----V----NQRVSDAAESRR-IFCNVVD 104 (113)
T ss_dssp EEECCS---------CHH----H----HHHHHHHHHHTT-CEEEETT
T ss_pred EeecCC---------CHH----H----HHHHHHHHHHcC-CEEEeCC
Confidence 886542 111 1 335777888875 5666543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.00081 Score=52.95 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=55.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
.+.+|+|.|+ |-||...++.+... |.+++++++++++.+...+. +...+ .|..+.+......+++|+||.
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~-Ga~~i~~~~~~~~~~~a~~l-------Gad~~-i~~~~~~~~~~~~~~~D~vid 99 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL-------GADEV-VNSRNADEMAAHLKSFDFILN 99 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-------TCSEE-EETTCHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcc-cccchhhccchhHHHHHhcc-------CCcEE-EECchhhHHHHhcCCCceeee
Confidence 5679999986 77999999888887 99999999887765544332 22222 356666666666678999999
Q ss_pred eccc
Q 016370 96 LAAI 99 (390)
Q Consensus 96 ~a~~ 99 (390)
+.+.
T Consensus 100 ~~g~ 103 (168)
T d1uufa2 100 TVAA 103 (168)
T ss_dssp CCSS
T ss_pred eeec
Confidence 9874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.92 E-value=0.0023 Score=50.33 Aligned_cols=42 Identities=19% Similarity=0.435 Sum_probs=34.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC--eEEEEecCChhhhcccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLE 60 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~ 60 (390)
||+|+|.| .|.+|..+++.|.+. |+ +|++++++++......+
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~-g~~~~I~~~D~~~~~~~~a~~ 44 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD 44 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhc-CCCeEEEEEECChHHHHHHHH
Confidence 57899998 699999999999988 64 78999998776655443
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.92 E-value=0.00016 Score=57.17 Aligned_cols=44 Identities=14% Similarity=0.091 Sum_probs=38.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~ 61 (390)
+.+|||+||+|-+|...++..... |.+|+++.+++++...+.+.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~~~~l 67 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL 67 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHc-CCceEEEecCHHHHHHHHhh
Confidence 457999999999999999999998 99999999988777666553
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.91 E-value=0.0027 Score=47.67 Aligned_cols=74 Identities=15% Similarity=0.177 Sum_probs=52.9
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHh-hccccEEEEe
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGL-IKMADLTINL 96 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~-~~~~d~Vih~ 96 (390)
||.|.|++|-+|+.+++.+.+.+++++.+. ++.. .+... ..++|+||.+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-----------------------------~~~~~~~~~~DvvIDF 51 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-----------------------------PLSLLTDGNTEVVIDF 51 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-----------------------------CTHHHHTTTCSEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-----------------------------chhhhccccCCEEEEc
Confidence 799999999999999999988767886653 2211 01111 1358999998
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
... ..+...++.|.+.+..+|.-+|
T Consensus 52 S~p------------------~~~~~~~~~~~~~~~~~ViGTT 76 (135)
T d1yl7a1 52 THP------------------DVVMGNLEFLIDNGIHAVVGTT 76 (135)
T ss_dssp CCT------------------TTHHHHHHHHHHTTCEEEECCC
T ss_pred ccH------------------HHHHHHHHHHHhcCCCEEEecc
Confidence 742 2266788899999977776555
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.00031 Score=55.95 Aligned_cols=73 Identities=15% Similarity=0.014 Sum_probs=50.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccEEEE
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLTIN 95 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~Vih 95 (390)
+.+|||+||+|-+|+..++.+... |.+|+++++++++...+... +...+. |..+.+..+.+-+ ..|.||+
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~-Ga~Via~~~~~~k~~~~~~l-------Gad~vi-~~~~~~~~~~l~~~~~~~vvD 102 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSL-------GASRVL-PRDEFAESRPLEKQVWAGAID 102 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH-------TEEEEE-EGGGSSSCCSSCCCCEEEEEE
T ss_pred CCcEEEEEccccchHHHHHHHHHc-CCCeEEEecchhHHHHHHhh-------cccccc-ccccHHHHHHHHhhcCCeeEE
Confidence 348999999999999999999998 99999999988876655443 333332 2222222222222 2788888
Q ss_pred ecc
Q 016370 96 LAA 98 (390)
Q Consensus 96 ~a~ 98 (390)
+.+
T Consensus 103 ~Vg 105 (177)
T d1o89a2 103 TVG 105 (177)
T ss_dssp SSC
T ss_pred Ecc
Confidence 775
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.79 E-value=0.00054 Score=53.04 Aligned_cols=65 Identities=22% Similarity=0.311 Sum_probs=48.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||.|.| +|.+|+++++.|++. |++|++.+|+.+....+.+.. ++.+ ..+..++++++|+||-+.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~-~~~i~v~~r~~~~~~~l~~~~------g~~~-------~~~~~~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQT-PHELIISGSSLERSKEIAEQL------ALPY-------AMSHQDLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTS-SCEEEEECSSHHHHHHHHHHH------TCCB-------CSSHHHHHHTCSEEEECS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhC-CCeEEEEcChHHhHHhhcccc------ceee-------echhhhhhhccceeeeec
Confidence 6899997 999999999999998 899999999877665543310 2111 123566777899998664
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.74 E-value=0.0014 Score=51.62 Aligned_cols=67 Identities=7% Similarity=0.157 Sum_probs=43.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|+.+||.|.| .|++|+.+++.|.+.++++++++..+..... ....... ..++.....++|+|+
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~-----------~~~~~~~-----~~~~~~~~~~~D~Vv 63 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-----------TKTPVFD-----VADVDKHADDVDVLF 63 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-----------SSSCEEE-----GGGGGGTTTTCSEEE
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc-----------ccccccc-----chhhhhhccccceEE
Confidence 4557899999 6999999999999977888777654332211 1111111 223344456799999
Q ss_pred Eecc
Q 016370 95 NLAA 98 (390)
Q Consensus 95 h~a~ 98 (390)
.+..
T Consensus 64 i~tp 67 (170)
T d1f06a1 64 LCMG 67 (170)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 8764
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.72 E-value=0.0036 Score=49.67 Aligned_cols=77 Identities=14% Similarity=0.238 Sum_probs=50.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh--hhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK--IKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
|||.|.| +|..|..++..|.++ |++|.+..|..+. ...+....... .-........+.-.+++.++++++|+||.
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~-g~~V~l~~r~~~~~~~~~i~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~ 77 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHP-RLGVKLNGVEIFWPEQLEKCLENAEVVLL 77 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHH-CCEEEEECCGGGHHHHHHHHTTCCBT-TTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEEecccHHHHHHHhhhhhhh-hhcchhccccccccccHHHHHhccchhhc
Confidence 7999999 699999999999999 9999999985432 22221110000 00111111223345678899999999997
Q ss_pred ec
Q 016370 96 LA 97 (390)
Q Consensus 96 ~a 97 (390)
+.
T Consensus 78 av 79 (180)
T d1txga2 78 GV 79 (180)
T ss_dssp CS
T ss_pred cc
Confidence 64
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.65 E-value=0.0021 Score=51.12 Aligned_cols=75 Identities=12% Similarity=0.030 Sum_probs=50.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCe-eEEeCCCCChhH----HHHhhc-
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRI-QFHRLNIKHDSR----LEGLIK- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i-~~~~~D~~d~~~----~~~~~~- 88 (390)
.+.+|||+|+ |-||...++.+... |. +|+++++++...+...+. +. .++...-.+..+ +.+...
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~-Ga~~Vi~~~~~~~~~~~a~~l-------Ga~~vi~~~~~~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEI-------GADLTLNRRETSVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHT-------TCSEEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheeccccc-ccccccccccccccccccccc-------cceEEEeccccchHHHHHHHHHhhCC
Confidence 5689999997 88999999999888 86 799999988776655442 22 222221122222 222222
Q ss_pred -cccEEEEeccc
Q 016370 89 -MADLTINLAAI 99 (390)
Q Consensus 89 -~~d~Vih~a~~ 99 (390)
++|+||.+.|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 39999999874
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.64 E-value=0.0023 Score=50.23 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=51.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCe-eEEeCCCCChhHHHHhhc-----c
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRI-QFHRLNIKHDSRLEGLIK-----M 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i-~~~~~D~~d~~~~~~~~~-----~ 89 (390)
.+.+|+|+|++|-+|...+..+...+..+|+++++++...+...+. +. .++ |..+.+..+...+ +
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~-------Ga~~~i--~~~~~~~~~~~~~~~~~~~ 97 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-------GADYVI--NASMQDPLAEIRRITESKG 97 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-------TCSEEE--ETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc-------CCceee--ccCCcCHHHHHHHHhhccc
Confidence 4578999999999999999999988336899999888766655442 22 222 2333333333332 3
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+++.
T Consensus 98 ~d~vid~~g~ 107 (170)
T d1jvba2 98 VDAVIDLNNS 107 (170)
T ss_dssp EEEEEESCCC
T ss_pred chhhhccccc
Confidence 9999999873
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.56 E-value=0.0063 Score=47.67 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=52.1
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCee-EEeCCCCChhHHHHhhc-----
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQ-FHRLNIKHDSRLEGLIK----- 88 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~-~~~~D~~d~~~~~~~~~----- 88 (390)
.+.+|+|+|+ |-+|...+..+... |. +|+++++++.+.+...+. +.. ++..+-.+.....+.+.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~-G~~~Vi~~d~~~~rl~~a~~~-------Ga~~~~~~~~~~~~~~~~~~~~~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEI-------GADLVLQISKESPQEIARKVEGQLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT-------TCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHc-CCceEEeccCCHHHHHHHHHh-------CCcccccccccccccccccccccCCC
Confidence 4568999986 99999999999888 77 799999988776655442 222 33333344444444332
Q ss_pred cccEEEEeccc
Q 016370 89 MADLTINLAAI 99 (390)
Q Consensus 89 ~~d~Vih~a~~ 99 (390)
++|+||.+.|.
T Consensus 97 g~Dvvid~~G~ 107 (171)
T d1pl8a2 97 KPEVTIECTGA 107 (171)
T ss_dssp CCSEEEECSCC
T ss_pred CceEEEeccCC
Confidence 48999999873
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.0021 Score=50.59 Aligned_cols=76 Identities=16% Similarity=0.065 Sum_probs=50.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
..++|+|||.|+ |-.+++++..|.+. |.+|+++.|+.+..+.+.+.... .......+..+.+ ...+|+|
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~-g~~i~I~nRt~~ka~~l~~~~~~----~~~~~~~~~~~~~-----~~~~dli 83 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAH----TGSIQALSMDELE-----GHEFDLI 83 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGG----GSSEEECCSGGGT-----TCCCSEE
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhccc-ceEEEeccchHHHHHHHHHHHhh----ccccccccccccc-----cccccee
Confidence 457899999996 55699999999998 88999999988766554332111 1112222332211 2458999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|++....
T Consensus 84 IN~Tp~G 90 (170)
T d1nyta1 84 INATSSG 90 (170)
T ss_dssp EECCSCG
T ss_pred ecccccC
Confidence 9997543
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.37 E-value=0.0088 Score=47.09 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=35.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL 59 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~ 59 (390)
.+|-|.| .|.+|..+++.|+++ ||+|++.+|++++.+.+.
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~ 42 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFL 42 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHH
T ss_pred CcEEEEe-EhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHH
Confidence 4689999 699999999999999 999999999987766553
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.34 E-value=0.0034 Score=50.50 Aligned_cols=70 Identities=19% Similarity=0.215 Sum_probs=52.0
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
.+..+.+++|.|.| .|-||+.+++.|..- |.+|++.++........ +....+.+.++++.+
T Consensus 37 ~g~el~gk~vgIiG-~G~IG~~va~~l~~f-g~~V~~~d~~~~~~~~~-----------------~~~~~~~l~~~l~~s 97 (197)
T d1j4aa1 37 IGREVRDQVVGVVG-TGHIGQVFMQIMEGF-GAKVITYDIFRNPELEK-----------------KGYYVDSLDDLYKQA 97 (197)
T ss_dssp CBCCGGGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHH-----------------TTCBCSCHHHHHHHC
T ss_pred cCccccCCeEEEec-ccccchhHHHhHhhh-cccccccCccccccccc-----------------ceeeecccccccccc
Confidence 34567889999999 999999999999876 99999998765432211 011234588888899
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+|+.+.-.
T Consensus 98 Dii~~~~pl 106 (197)
T d1j4aa1 98 DVISLHVPD 106 (197)
T ss_dssp SEEEECSCC
T ss_pred ccccccCCc
Confidence 988877643
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.33 E-value=0.0024 Score=47.71 Aligned_cols=69 Identities=14% Similarity=0.044 Sum_probs=53.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-ccccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI-KMADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~-~~~d~Vih~ 96 (390)
|.|+|.| -|-+|+.+++.|. +++|.+++..+.....+.. .++.++.||.++++.|+++- .+++.||-+
T Consensus 1 kHivI~G-~g~~g~~l~~~L~---~~~i~vi~~d~~~~~~~~~-------~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR---GSEVFVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC---GGGEEEEESCTTHHHHHHH-------TTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHc---CCCCEEEEcchHHHHHHHh-------cCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence 4689998 5788999999984 5678888887776555433 48899999999999887764 358898865
Q ss_pred c
Q 016370 97 A 97 (390)
Q Consensus 97 a 97 (390)
.
T Consensus 70 ~ 70 (129)
T d2fy8a1 70 L 70 (129)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.31 E-value=0.0052 Score=48.44 Aligned_cols=104 Identities=15% Similarity=0.181 Sum_probs=58.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh-h-hccccccccC--CCCCe-eEEeCCCCChhHHHHhhcccc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-I-KHLLEPESQT--GADRI-QFHRLNIKHDSRLEGLIKMAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-~-~~~~~~~~~~--~~~~i-~~~~~D~~d~~~~~~~~~~~d 91 (390)
|.||.|-| .|-||+.+++.|.++++.+|+++....+. . ..+....... ..+.. .+....+.-...+..++.++|
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence 56899998 89999999999999878898887543322 1 1111100000 00000 000111222234556666799
Q ss_pred EEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 92 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 92 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
+||-|.+... +..-++...+.|+|+|+.++
T Consensus 80 iViecTG~f~------------------~~e~a~~hl~~G~KvIi~~~ 109 (178)
T d1b7go1 80 IVVDTTPNGV------------------GAQYKPIYLQLQRNAIFQGG 109 (178)
T ss_dssp EEEECCSTTH------------------HHHHHHHHHHTTCEEEECTT
T ss_pred EEEECCCCcC------------------CHHHHHHHHHcCCEEEEECC
Confidence 9999988541 12223444456678887544
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.26 E-value=0.0068 Score=47.98 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=49.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+++|.|.| .|-||+.+++.|..- |.+|++.+|.+... +..-.+.++++++.+|+|
T Consensus 39 ~l~gk~vgIiG-~G~IG~~va~~l~~~-g~~v~~~d~~~~~~--------------------~~~~~~~l~ell~~sDiv 96 (181)
T d1qp8a1 39 LIQGEKVAVLG-LGEIGTRVGKILAAL-GAQVRGFSRTPKEG--------------------PWRFTNSLEEALREARAA 96 (181)
T ss_dssp CCTTCEEEEES-CSTHHHHHHHHHHHT-TCEEEEECSSCCCS--------------------SSCCBSCSHHHHTTCSEE
T ss_pred cccCceEEEec-cccccccceeeeecc-cccccccccccccc--------------------ceeeeechhhhhhccchh
Confidence 57889999999 788999999999988 99999999865321 111123578899999999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
+-+.-.
T Consensus 97 ~~~~pl 102 (181)
T d1qp8a1 97 VCALPL 102 (181)
T ss_dssp EECCCC
T ss_pred hccccc
Confidence 976643
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.26 E-value=0.0048 Score=48.61 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=49.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeC--CCCC-hhHHHHhh--ccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL--NIKH-DSRLEGLI--KMA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~--D~~d-~~~~~~~~--~~~ 90 (390)
.+.+|+|.|++| +|...+..+...++.+|+++++++.+.+...+. +.....- +-.+ .+...... .++
T Consensus 28 ~GdtVlV~GaGG-~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~-------Ga~~~i~~~~~~~~~~~~~~~~~~~G~ 99 (176)
T d2jhfa2 28 QGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-------GATECVNPQDYKKPIQEVLTEMSNGGV 99 (176)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-------TCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCEEEEECCCC-cHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh-------CCeeEEecCCchhHHHHHHHHHhcCCC
Confidence 567899999965 898888888888447899999988776655542 2222221 2222 12222222 249
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||.+.+.
T Consensus 100 D~vid~~G~ 108 (176)
T d2jhfa2 100 DFSFEVIGR 108 (176)
T ss_dssp SEEEECSCC
T ss_pred CEEEecCCc
Confidence 999999874
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.19 E-value=0.0056 Score=48.31 Aligned_cols=75 Identities=13% Similarity=0.206 Sum_probs=49.3
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||-|.| .|.+|..++++|+++ ||+|++.+|++++...+.+.... ........ ...+.+.+...+...+.++-+.
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~-G~~V~~~dr~~~~~~~l~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 76 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEK-GFKVAVFNRTYSKSEEFMKANAS--APFAGNLK-AFETMEAFAASLKKPRKALILV 76 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHTTT--STTGGGEE-ECSCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEe-ehHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHcCCc--cccccchh-hhhhhhHHHHhcccceEEEEee
Confidence 6899998 999999999999999 99999999998776655432111 00001111 1224445555556666666554
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.07 E-value=0.0026 Score=49.28 Aligned_cols=78 Identities=18% Similarity=0.336 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+++-+|+|.| .|..|..-++.+... |.+|.+++.+.+..+.+.... ...++. -..+++.+.+.++++|+||
T Consensus 30 v~pa~V~ViG-aGvaG~~A~~~A~~l-GA~V~~~D~~~~~l~~l~~~~----~~~~~~---~~~~~~~l~~~~~~aDivI 100 (168)
T d1pjca1 30 VKPGKVVILG-GGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLF----GSRVEL---LYSNSAEIETAVAEADLLI 100 (168)
T ss_dssp BCCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH----GGGSEE---EECCHHHHHHHHHTCSEEE
T ss_pred CCCcEEEEEC-CChHHHHHHHHHhhC-CCEEEEEeCcHHHHHHHHHhh----ccccee---ehhhhhhHHHhhccCcEEE
Confidence 4567999999 799999999999999 999999999987766554421 123333 2457788999999999999
Q ss_pred EeccccC
Q 016370 95 NLAAICT 101 (390)
Q Consensus 95 h~a~~~~ 101 (390)
-++-..+
T Consensus 101 ~aalipG 107 (168)
T d1pjca1 101 GAVLVPG 107 (168)
T ss_dssp ECCCCTT
T ss_pred EeeecCC
Confidence 9987653
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.03 E-value=0.0031 Score=50.37 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=33.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK 56 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 56 (390)
-+||.|.|| |.+|+.++..++.. |++|+++++++....
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~-G~~V~l~D~~~~~l~ 41 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASK-GTPILMKDINEHGIE 41 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHT-TCCEEEECSSHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhC-CCeEEEEECCHHHHh
Confidence 368999996 99999999999998 999999999876443
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.95 E-value=0.0048 Score=48.61 Aligned_cols=74 Identities=16% Similarity=0.077 Sum_probs=50.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeEEeCCCCC---hhHHHHhhc--c
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH---DSRLEGLIK--M 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d---~~~~~~~~~--~ 89 (390)
.+.+|+|.|+ |-||...++.+... |. +|+++++++.+.+...+. +...+ .|..+ .+.+.++.. +
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~-Ga~~Vi~~d~~~~r~~~a~~l-------Ga~~~-i~~~~~~~~~~v~~~t~g~G 96 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLR-GAGRIIGVGSRPICVEAAKFY-------GATDI-LNYKNGHIEDQVMKLTNGKG 96 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTT-TCSCEEEECCCHHHHHHHHHH-------TCSEE-ECGGGSCHHHHHHHHTTTSC
T ss_pred CCCEEEEEcC-Ccchhhhhhhhhcc-cccccccccchhhhHHHHHhh-------Ccccc-ccccchhHHHHHHHHhhccC
Confidence 4678999986 99999999999988 75 699999987766554442 22221 23333 233444443 3
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+++.
T Consensus 97 ~D~vid~~g~ 106 (174)
T d1jqba2 97 VDRVIMAGGG 106 (174)
T ss_dssp EEEEEECSSC
T ss_pred cceEEEccCC
Confidence 9999999874
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.94 E-value=0.028 Score=38.47 Aligned_cols=70 Identities=16% Similarity=0.156 Sum_probs=49.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||-++|-.|-==+.|++.|+++ |+.|.+.|+..++....++ ..++++..+.- .+. ++++|.||...
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~-G~~VsGSD~~~~~~t~~L~------~~Gi~i~~gh~--~~~----i~~~d~vV~Ss 68 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSN-GNDVYGSNIEETERTAYLR------KLGIPIFVPHS--ADN----WYDPDLVIKTP 68 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHH------HTTCCEESSCC--TTS----CCCCSEEEECT
T ss_pred cEEEEEeECHHHHHHHHHHHHhC-CCeEEEEeCCCChhHHHHH------HCCCeEEeeec--ccc----cCCCCEEEEec
Confidence 68888887776666789999999 9999999998754433332 24777765522 221 35789999988
Q ss_pred ccc
Q 016370 98 AIC 100 (390)
Q Consensus 98 ~~~ 100 (390)
++.
T Consensus 69 AI~ 71 (89)
T d1j6ua1 69 AVR 71 (89)
T ss_dssp TCC
T ss_pred CcC
Confidence 764
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.94 E-value=0.01 Score=46.16 Aligned_cols=43 Identities=14% Similarity=0.141 Sum_probs=35.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~ 60 (390)
.+.+|+|.|+ |-+|...++.+... |.+|+++++++.+.+...+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~-G~~Vi~~~~~~~~~~~a~~ 69 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAM-GLHVAAIDIDDAKLELARK 69 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHc-CCccceecchhhHHHhhhc
Confidence 5678999986 88999988888777 8999999998877665544
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.90 E-value=0.0083 Score=47.09 Aligned_cols=75 Identities=12% Similarity=0.107 Sum_probs=46.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhh-----cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLI-----KM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~-----~~ 89 (390)
.+.+|||.|++ -+|...++.+... | ..|+++++++.+.+..++. +...+.-.-.+.+.+...+ .+
T Consensus 28 ~G~tVlI~GaG-GvG~~aiq~ak~~-G~~~vi~~~~~~~k~~~ak~l-------Ga~~~i~~~~~~~~~~~~~~~~~~~g 98 (176)
T d2fzwa2 28 PGSVCAVFGLG-GVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEF-------GATECINPQDFSKPIQEVLIEMTDGG 98 (176)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHH-------TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEecch-hHHHHHHHHHHHH-hcCceEEEcccHHHHHHHHHh-------CCcEEEeCCchhhHHHHHHHHHcCCC
Confidence 56789999985 5899999999998 6 4677777777665544432 2222221111222233322 24
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+.|.
T Consensus 99 ~D~vid~~G~ 108 (176)
T d2fzwa2 99 VDYSFECIGN 108 (176)
T ss_dssp BSEEEECSCC
T ss_pred CcEeeecCCC
Confidence 9999999873
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.89 E-value=0.012 Score=46.84 Aligned_cols=68 Identities=18% Similarity=0.110 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
..+.+++|.|.| .|.||+.+++.|..- |.+|++.++....... .. ...+.++++++.+|+
T Consensus 40 ~~l~~~~vgiiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~-----------~~-------~~~~~l~ell~~sDi 99 (188)
T d1sc6a1 40 FEARGKKLGIIG-YGHIGTQLGILAESL-GMYVYFYDIENKLPLG-----------NA-------TQVQHLSDLLNMSDV 99 (188)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCCCT-----------TC-------EECSCHHHHHHHCSE
T ss_pred ccccceEEEEee-cccchhhhhhhcccc-cceEeeccccccchhh-----------hh-------hhhhhHHHHHhhccc
Confidence 356788999997 999999999998877 9999999976432110 11 111358888999999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
|+-++...
T Consensus 100 i~i~~plt 107 (188)
T d1sc6a1 100 VSLHVPEN 107 (188)
T ss_dssp EEECCCSS
T ss_pred eeecccCC
Confidence 98776544
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.0047 Score=49.54 Aligned_cols=39 Identities=21% Similarity=0.415 Sum_probs=34.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI 55 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 55 (390)
|.-+||.|.|| |.+|+.++..+... |++|++++++++..
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~-G~~V~l~D~~~~~l 40 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAAT-GHTVVLVDQTEDIL 40 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSCHHHH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhC-CCcEEEEECChHHH
Confidence 44579999996 99999999999998 99999999987543
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.87 E-value=0.0093 Score=46.04 Aligned_cols=58 Identities=19% Similarity=0.237 Sum_probs=47.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+|+|+|.|.+..+|+-|+..|.++ |.+|+++..... .+.+..++.|+|
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~-gatVt~~h~~t~----------------------------~l~~~~~~ADiv 84 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFTK----------------------------NLRHHVENADLL 84 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSCS----------------------------CHHHHHHHCSEE
T ss_pred ccccceEEEEeccccccHHHHHHHHHh-hccccccccccc----------------------------hhHHHHhhhhHh
Confidence 467899999999999999999999998 899988765431 245556778999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.++|..
T Consensus 85 I~a~G~p 91 (166)
T d1b0aa1 85 IVAVGKP 91 (166)
T ss_dssp EECSCCT
T ss_pred hhhccCc
Confidence 9988855
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.83 E-value=0.0057 Score=48.78 Aligned_cols=73 Identities=18% Similarity=0.108 Sum_probs=45.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhhc-cccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLIK-MADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~~-~~d~ 92 (390)
.+|||+||+|-+|+..++.+... |.+ |++++.+++....+... -+... ..|..++ +.+.++.. ++|+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~-Ga~~vi~~~~~~e~~~~l~~~------~gad~-vi~~~~~~~~~~~~~~~~~GvDv 103 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLL-GCSRVVGICGTQEKCLFLTSE------LGFDA-AVNYKTGNVAEQLREACPGGVDV 103 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHT-TCSEEEEEESSHHHHHHHHHH------SCCSE-EEETTSSCHHHHHHHHCTTCEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHc-CCcceecccchHHHHhhhhhc------ccceE-EeeccchhHHHHHHHHhccCceE
Confidence 67999999999999999999888 765 55455554444333221 12221 2233332 23333332 4999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
||++.|
T Consensus 104 v~D~vG 109 (187)
T d1vj1a2 104 YFDNVG 109 (187)
T ss_dssp EEESSC
T ss_pred EEecCC
Confidence 999886
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.78 E-value=0.014 Score=45.57 Aligned_cols=77 Identities=16% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~V 93 (390)
.+.+|+|.|+ |.+|...++.+...++..|+++++++.+.....+. ....++..+-.+.+...+... ++|+|
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~------ga~~~i~~~~~~~~~~~~~~~~~g~d~v 104 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL------GADHVVDARRDPVKQVMELTRGRGVNVA 104 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT------TCSEEEETTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc------ccceeecCcccHHHHHHHhhCCCCceEE
Confidence 4578999985 99999999999888446778888887666555442 122333322122223333322 39999
Q ss_pred EEeccc
Q 016370 94 INLAAI 99 (390)
Q Consensus 94 ih~a~~ 99 (390)
|.+++.
T Consensus 105 id~~g~ 110 (172)
T d1h2ba2 105 MDFVGS 110 (172)
T ss_dssp EESSCC
T ss_pred EEecCc
Confidence 999873
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.78 E-value=0.041 Score=38.22 Aligned_cols=71 Identities=23% Similarity=0.205 Sum_probs=50.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.|+|.+.|..|--=+.|++.|.++ |++|.+.|+..++.. .+.+ .++.+..++-.+ .+.++|.||
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~-G~~VsGSD~~~~~~~~~L~~-------~Gi~v~~g~~~~------~i~~~d~vV 72 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNE-GYQISGSDIADGVVTQRLAQ-------AGAKIYIGHAEE------HIEGASVVV 72 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH-TCEEEEEESCCSHHHHHHHH-------TTCEEEESCCGG------GGTTCSEEE
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhHHHH-------CCCeEEECCccc------cCCCCCEEE
Confidence 4578999886665558899999999 999999998754433 3332 477776654432 235689999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
...+..
T Consensus 73 ~S~AI~ 78 (96)
T d1p3da1 73 VSSAIK 78 (96)
T ss_dssp ECTTSC
T ss_pred ECCCcC
Confidence 887754
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=95.76 E-value=0.003 Score=49.71 Aligned_cols=76 Identities=21% Similarity=0.183 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
..++++|+|.|+.| .|+.++..|.+. +-+|+++.|+.+..+.+.+.... ...+.....|- ..+..+|+|
T Consensus 15 ~~~~k~vlIlGaGG-aarai~~aL~~~-~~~i~I~nR~~~~a~~l~~~~~~--~~~~~~~~~~~-------~~~~~~dii 83 (171)
T d1p77a1 15 LRPNQHVLILGAGG-ATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQP--YGNIQAVSMDS-------IPLQTYDLV 83 (171)
T ss_dssp CCTTCEEEEECCSH-HHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGGG-------CCCSCCSEE
T ss_pred CCCCCEEEEECCcH-HHHHHHHHHccc-CceeeeccchHHHHHHHHHHHhh--ccccchhhhcc-------cccccccee
Confidence 45788999999655 589999999876 78999999998765554332111 11233333221 124569999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|++....
T Consensus 84 IN~tp~g 90 (171)
T d1p77a1 84 INATSAG 90 (171)
T ss_dssp EECCCC-
T ss_pred eeccccc
Confidence 9997544
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.74 E-value=0.013 Score=46.00 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=47.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCe-EEEEecCChhhhccccccccCCCCCe-eEEeCCCCChh---HHHHhhc-c
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHK-ILALDVYNDKIKHLLEPESQTGADRI-QFHRLNIKHDS---RLEGLIK-M 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~i-~~~~~D~~d~~---~~~~~~~-~ 89 (390)
.+.+|+|.|+ |-+|...++.+... |.. |+++++++.+.+...+. +. +++ |..+.+ .+.++.. +
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~-g~~~v~~~~~~~~k~~~a~~~-------Ga~~~i--~~~~~~~~~~i~~~t~gg 96 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQL-------GATHVI--NSKTQDPVAAIKEITDGG 96 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHH-------TCSEEE--ETTTSCHHHHHHHHTTSC
T ss_pred CCCEEEEeCC-CHHHhhhhhccccc-ccceeeeeccHHHHHHHHHHc-------CCeEEE--eCCCcCHHHHHHHHcCCC
Confidence 5678999997 99999999999888 665 55667766655544432 22 333 333333 2333333 3
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+.+.
T Consensus 97 ~D~vid~~G~ 106 (174)
T d1f8fa2 97 VNFALESTGS 106 (174)
T ss_dssp EEEEEECSCC
T ss_pred CcEEEEcCCc
Confidence 9999999873
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.72 E-value=0.019 Score=44.56 Aligned_cols=82 Identities=13% Similarity=0.061 Sum_probs=56.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCC--CChhHHHHhhccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI--KHDSRLEGLIKMA 90 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~--~d~~~~~~~~~~~ 90 (390)
.++.||+|+|.|-|.-+|+-|+..|+++ |.+|+.+.............. .-......|+ ..++.+++....+
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~-gaTVt~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~lk~~~~~a 98 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNNIQKFTRGESL-----KLNKHHVEDLGEYSEDLLKKCSLDS 98 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSEEEEEESCCCS-----SCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHC-CCEEEEeccccccccccccce-----eeeeeccccccccchhHHhhccccC
Confidence 4688999999999999999999999998 999998876532211111000 0001111222 3456788888899
Q ss_pred cEEEEecccc
Q 016370 91 DLTINLAAIC 100 (390)
Q Consensus 91 d~Vih~a~~~ 100 (390)
|+||..+|..
T Consensus 99 DIvIsavG~p 108 (171)
T d1edza1 99 DVVITGVPSE 108 (171)
T ss_dssp SEEEECCCCT
T ss_pred CEEEEccCCC
Confidence 9999888764
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.67 E-value=0.0056 Score=46.99 Aligned_cols=65 Identities=11% Similarity=0.176 Sum_probs=46.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
|||.+.|+ |.+|+++++.|++.++++|++.+|+++..+.+.+. .+++... |.. .+.++|+||-+.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~------~~~~~~~-~~~-------~v~~~Div~lav 65 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE------LGVETSA-TLP-------ELHSDDVLILAV 65 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH------TCCEEES-SCC-------CCCTTSEEEECS
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh------ccccccc-ccc-------cccccceEEEec
Confidence 68999985 99999999999998459999999998776655442 1333321 211 145689988653
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=95.58 E-value=0.011 Score=39.27 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=33.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK 56 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~ 56 (390)
||+|.|.| +|.+|+=++....+. |+++++++-.++...
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~L-G~~v~vldp~~~~pa 38 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPL-GIAVWPVGLDAEPAA 38 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGG-TEEEEEECTTSCGGG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHc-CCEEEEEcCCCCCcc
Confidence 57899999 899999999999999 999999998765443
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.34 E-value=0.014 Score=46.89 Aligned_cols=68 Identities=25% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
....+.+++|.|.| .|-||+.+++.|..- |.+|++.++....... ..+ +...+.++++.+
T Consensus 39 ~~~~l~~ktvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~----------~~~--------~~~~l~~l~~~~ 98 (199)
T d1dxya1 39 IGKELGQQTVGVMG-TGHIGQVAIKLFKGF-GAKVIAYDPYPMKGDH----------PDF--------DYVSLEDLFKQS 98 (199)
T ss_dssp CCCCGGGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSSCC----------TTC--------EECCHHHHHHHC
T ss_pred ccccccceeeeeee-ccccccccccccccc-ceeeeccCCccchhhh----------cch--------hHHHHHHHHHhc
Confidence 34567889999999 999999999999887 9999999986532110 111 123578888889
Q ss_pred cEEEEecc
Q 016370 91 DLTINLAA 98 (390)
Q Consensus 91 d~Vih~a~ 98 (390)
|+|+-+.-
T Consensus 99 D~v~~~~p 106 (199)
T d1dxya1 99 DVIDLHVP 106 (199)
T ss_dssp SEEEECCC
T ss_pred ccceeeec
Confidence 99987654
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.30 E-value=0.024 Score=43.95 Aligned_cols=58 Identities=12% Similarity=0.242 Sum_probs=46.7
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
++.+|+|.|.|.+..+|+-|+..|+++ |.+|+.+...... +.+..++.|+|
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~-gatVt~~~~~t~~----------------------------l~~~~~~aDiv 86 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSKTAH----------------------------LDEEVNKGDIL 86 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSS----------------------------HHHHHTTCSEE
T ss_pred ccccceEEEEecCCccchHHHHHHHhc-cCceEEEeccccc----------------------------HHHHHhhccch
Confidence 478999999999999999999999999 9999988765422 34455677888
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|.++|..
T Consensus 87 i~a~G~~ 93 (170)
T d1a4ia1 87 VVATGQP 93 (170)
T ss_dssp EECCCCT
T ss_pred hhccccc
Confidence 8877754
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=95.30 E-value=0.0078 Score=46.96 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=34.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLL 59 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~ 59 (390)
++++|+|.|+ |-.|++++..|.+. |. +|+++.|+.+..+.+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~-g~~~I~I~nR~~~ka~~L~ 58 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLA 58 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHC-CCCEEEEecccHHHHHHHH
Confidence 4678999995 88999999999998 75 7999999887655543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.29 E-value=0.026 Score=44.94 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=52.8
Q ss_pred CCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccc
Q 016370 11 DGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA 90 (390)
Q Consensus 11 ~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~ 90 (390)
....+.+++|.|.| .|-||+.+++.|..- |.+|++.++......... ..+...+.++++++.+
T Consensus 43 ~~~eL~gktvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~---------------~~~~~~~~l~~ll~~s 105 (193)
T d1mx3a1 43 GAARIRGETLGIIG-LGRVGQAVALRAKAF-GFNVLFYDPYLSDGVERA---------------LGLQRVSTLQDLLFHS 105 (193)
T ss_dssp TCCCCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCTTHHHH---------------HTCEECSSHHHHHHHC
T ss_pred CceeeeCceEEEec-cccccccceeeeecc-ccceeeccCcccccchhh---------------hccccccchhhccccC
Confidence 34568899999998 999999999999887 999999998654322110 0111234688888889
Q ss_pred cEEEEecccc
Q 016370 91 DLTINLAAIC 100 (390)
Q Consensus 91 d~Vih~a~~~ 100 (390)
|+|+-+.-..
T Consensus 106 D~i~~~~plt 115 (193)
T d1mx3a1 106 DCVTLHCGLN 115 (193)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEeeccc
Confidence 9888766443
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.21 E-value=0.024 Score=43.46 Aligned_cols=70 Identities=7% Similarity=0.082 Sum_probs=52.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLT 93 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~V 93 (390)
.+.+|+|.|.| .|.||+.+++.|... |.+|.+.+..+-.. ++.. ..+.++. .+++++...|+|
T Consensus 21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~-G~~V~v~e~dp~~a--l~A~-----~dG~~v~--------~~~~a~~~adiv 83 (163)
T d1li4a1 21 MIAGKVAVVAG-YGDVGKGCAQALRGF-GARVIITEIDPINA--LQAA-----MEGYEVT--------TMDEACQEGNIF 83 (163)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHH--HHHH-----HTTCEEC--------CHHHHTTTCSEE
T ss_pred eecCCEEEEec-cccccHHHHHHHHhC-CCeeEeeecccchh--HHhh-----cCceEee--------ehhhhhhhccEE
Confidence 36789999999 999999999999999 99999999976332 1110 1233332 377888889999
Q ss_pred EEecccc
Q 016370 94 INLAAIC 100 (390)
Q Consensus 94 ih~a~~~ 100 (390)
|-+.+..
T Consensus 84 vtaTGn~ 90 (163)
T d1li4a1 84 VTTTGCI 90 (163)
T ss_dssp EECSSCS
T ss_pred EecCCCc
Confidence 9887743
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.08 E-value=0.03 Score=44.49 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=51.8
Q ss_pred CCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 10 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
+....+.+++|.|.| .|-||+.+++.|..- |.+|.+.++.......... ......+++.++++.
T Consensus 40 ~~~~~l~g~tvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~--------------~~~~~~~~l~~ll~~ 103 (191)
T d1gdha1 40 LVGEKLDNKTLGIYG-FGSIGQALAKRAQGF-DMDIDYFDTHRASSSDEAS--------------YQATFHDSLDSLLSV 103 (191)
T ss_dssp TCBCCCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHHH--------------HTCEECSSHHHHHHH
T ss_pred cccceecccceEEee-cccchHHHHHHHHhh-ccccccccccccccchhhc--------------ccccccCCHHHHHhh
Confidence 344567789999999 899999999998887 9999999875432221110 001112458888999
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+|+-+.-.
T Consensus 104 sD~v~l~~pl 113 (191)
T d1gdha1 104 SQFFSLNAPS 113 (191)
T ss_dssp CSEEEECCCC
T ss_pred CCeEEecCCC
Confidence 9998766543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.06 E-value=0.026 Score=44.17 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=48.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccccccCCCCCeeE-EeCCCCC--hhHHHHhh--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQF-HRLNIKH--DSRLEGLI--KM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~i~~-~~~D~~d--~~~~~~~~--~~ 89 (390)
.+.+|+|+| .|-||...++.+... |. .|++.++++.+....++. +... +...-.+ ........ .+
T Consensus 28 ~G~~VlV~G-~G~iGl~a~~~ak~~-Ga~~Vi~~d~~~~r~~~a~~~-------Ga~~~i~~~~~~~~~~~~~~~~~~~G 98 (174)
T d1e3ia2 28 PGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL-------GATDCLNPRELDKPVQDVITELTAGG 98 (174)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT-------TCSEEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEEC-CChHHHHHHHHHHHh-CCceeeeeccchHHHHHHHHh-------CCCcccCCccchhhhhhhHhhhhcCC
Confidence 567999997 599999999999998 76 688888887766554442 2222 2211111 12222222 24
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+.|.
T Consensus 99 ~d~vie~~G~ 108 (174)
T d1e3ia2 99 VDYSLDCAGT 108 (174)
T ss_dssp BSEEEESSCC
T ss_pred CcEEEEeccc
Confidence 9999999874
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.00 E-value=0.047 Score=43.04 Aligned_cols=73 Identities=22% Similarity=0.224 Sum_probs=52.5
Q ss_pred CCCCCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 10 ~~~~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
+....+.++++.|.| .|-||+.+++.|..- |.+|++.++...+...... .++ ...++++++.
T Consensus 37 ~~~~~l~~k~vgiiG-~G~IG~~va~~~~~f-g~~v~~~d~~~~~~~~~~~--------~~~--------~~~l~ell~~ 98 (184)
T d1ygya1 37 FSGTEIFGKTVGVVG-LGRIGQLVAQRIAAF-GAYVVAYDPYVSPARAAQL--------GIE--------LLSLDDLLAR 98 (184)
T ss_dssp CCBCCCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCHHHHHHH--------TCE--------ECCHHHHHHH
T ss_pred cccccccceeeeecc-ccchhHHHHHHhhhc-cceEEeecCCCChhHHhhc--------Cce--------eccHHHHHhh
Confidence 344567788999998 899999999999886 8999999987644332111 111 2347788889
Q ss_pred ccEEEEecccc
Q 016370 90 ADLTINLAAIC 100 (390)
Q Consensus 90 ~d~Vih~a~~~ 100 (390)
+|+|+-+.-..
T Consensus 99 sDiv~~~~Plt 109 (184)
T d1ygya1 99 ADFISVHLPKT 109 (184)
T ss_dssp CSEEEECCCCS
T ss_pred CCEEEEcCCCC
Confidence 99998766443
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.99 E-value=0.038 Score=42.96 Aligned_cols=76 Identities=14% Similarity=0.231 Sum_probs=47.2
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hh-hhccccccccCCCCCeeEEeCC-----------CCChhHH
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DK-IKHLLEPESQTGADRIQFHRLN-----------IKHDSRL 83 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~-~~~~~~~~~~~~~~~i~~~~~D-----------~~d~~~~ 83 (390)
|++|.|-| -|-||+.+++.|..++..+|+++.-.. .. ...+... +...+... +.-...+
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~v~g~~ 72 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK-------GYDLYVAIPERVKLFEKAGIEVAGTV 72 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT-------TCCEEESSGGGHHHHHHTTCCCCEEH
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhc-------CCceEecccccceeecccCcccCCCh
Confidence 67899998 899999999999888667877765432 21 1122111 12222211 1111234
Q ss_pred HHhhccccEEEEecccc
Q 016370 84 EGLIKMADLTINLAAIC 100 (390)
Q Consensus 84 ~~~~~~~d~Vih~a~~~ 100 (390)
..++.++|+||-|.|..
T Consensus 73 ~~~~~~vDvViEcTG~f 89 (171)
T d1cf2o1 73 DDMLDEADIVIDCTPEG 89 (171)
T ss_dssp HHHHHTCSEEEECCSTT
T ss_pred hHhhcCCCEEEEccCCC
Confidence 55667899999999854
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.98 E-value=0.14 Score=42.17 Aligned_cols=113 Identities=17% Similarity=0.199 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhcccccc---c---------------cCCCCCeeEEeC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPE---S---------------QTGADRIQFHRL 75 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~---~---------------~~~~~~i~~~~~ 75 (390)
++..+|+|.| .|-+|++++..|... |. +++++|.+.-....+.+.. . ...-+.+.+...
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~-Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~ 105 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASA-GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 105 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence 4557999999 566999999999999 75 6888876542222221110 0 001123333333
Q ss_pred CCC-ChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 76 NIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 76 D~~-d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
+.. +.+.....+...|+||.+.. |......+-++|.+.+..+|+.+....+|..
T Consensus 106 ~~~~~~~~~~~~~~~~divid~~d-----------------~~~~~~~in~~~~~~~ip~i~g~~~~~~g~~ 160 (247)
T d1jw9b_ 106 NALLDDAELAALIAEHDLVLDCTD-----------------NVAVRNQLNAGCFAAKVPLVSGAAIRMEGQI 160 (247)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-----------------SHHHHHHHHHHHHHHTCCEEEEEEEBTEEEE
T ss_pred hhhhhhccccccccccceeeeccc-----------------hhhhhhhHHHHHHHhCCCcccccccccccce
Confidence 322 34456666677888887652 1222334556788888889988776666543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.93 E-value=0.039 Score=43.68 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=50.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
..+.+++|.|.| .|-||+.+++.|..- |.+|...++...+...... ..+.....+.++++.+|+
T Consensus 40 ~~l~~~~vgiiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~--------------~~~~~~~~l~~~l~~sD~ 103 (188)
T d2naca1 40 YDLEAMHVGTVA-AGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKE--------------LNLTWHATREDMYPVCDV 103 (188)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHH--------------HTCEECSSHHHHGGGCSE
T ss_pred eeccccceeecc-ccccchhhhhhhhcc-CceEEEEeecccccccccc--------------ccccccCCHHHHHHhccc
Confidence 356788999999 999999999999987 8999999986533222111 011223457788888999
Q ss_pred EEEeccc
Q 016370 93 TINLAAI 99 (390)
Q Consensus 93 Vih~a~~ 99 (390)
|+-+.-.
T Consensus 104 v~~~~pl 110 (188)
T d2naca1 104 VTLNCPL 110 (188)
T ss_dssp EEECSCC
T ss_pred hhhcccc
Confidence 8766543
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.90 E-value=0.02 Score=44.67 Aligned_cols=78 Identities=22% Similarity=0.329 Sum_probs=46.0
Q ss_pred CCEEEEEcCchhHHHH--HHHHHHhh---CCCeEEEEecCChhhhcccc---ccccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 17 PVTICMIGAGGFIGSH--LCEKILLE---TPHKILALDVYNDKIKHLLE---PESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 17 ~~~vlItGatG~iG~~--l~~~L~~~---~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
.|||.|.|| |.+|.. ++..|+.. .+.+++.++.++...+.... ..........++. ...+.++++.
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~-----~~td~~eaL~ 75 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-----KTMNLDDVII 75 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHT
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE-----EeCChhhccc
Confidence 479999996 877764 34445442 24699999998764432110 0000011122222 2345777889
Q ss_pred cccEEEEecccc
Q 016370 89 MADLTINLAAIC 100 (390)
Q Consensus 89 ~~d~Vih~a~~~ 100 (390)
++|+||..++..
T Consensus 76 dad~Vv~~~~~g 87 (171)
T d1obba1 76 DADFVINTAMVG 87 (171)
T ss_dssp TCSEEEECCCTT
T ss_pred CCCeEeeecccc
Confidence 999999998754
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.74 E-value=0.041 Score=42.81 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=59.0
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec-CChh-hhccccccccCCCCCeeEEeCCCC-----------ChhHHH
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDV-YNDK-IKHLLEPESQTGADRIQFHRLNIK-----------HDSRLE 84 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~-~~~~~~~~~~~~~~~i~~~~~D~~-----------d~~~~~ 84 (390)
+||.|-| .|-||+.+++.|.+++..+|+.+.- .+.. ...+.. .++..+..+-. ....+.
T Consensus 3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (172)
T d2czca2 3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE-------LGIPVYAASEEFIPRFEKEGFEVAGTLN 74 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH-------TTCCEEESSGGGHHHHHHHTCCCSCBHH
T ss_pred EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh-------cCceeecccccceeeecccCccccchhh
Confidence 5899999 7999999999999876788877754 2222 112221 12233332222 122455
Q ss_pred HhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeec
Q 016370 85 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139 (390)
Q Consensus 85 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss 139 (390)
.++.++|+||-|.|... +..-++...+.|.+.|.+|+
T Consensus 75 ~~~~~vDvViEcTG~f~------------------~~~~~~~hl~~G~k~Vi~s~ 111 (172)
T d2czca2 75 DLLEKVDIIVDATPGGI------------------GAKNKPLYEKAGVKAIFQGG 111 (172)
T ss_dssp HHHTTCSEEEECCSTTH------------------HHHHHHHHHHHTCEEEECTT
T ss_pred hhhccCCEEEECCCCCC------------------CHHHHHHHHHcCCCEEEECC
Confidence 55668999999998542 22233444456767777775
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.71 E-value=0.038 Score=43.10 Aligned_cols=75 Identities=16% Similarity=0.058 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhccccccccCCCCCeeEEeCCCC--C--hhHHHHhhc-
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK--H--DSRLEGLIK- 88 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~--d--~~~~~~~~~- 88 (390)
-.+.+|+|.|+ |-+|...++.+... | .+|+++++++++.+...+. +...+. |.. | .+.......
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~-G~~~Vi~~d~~~~kl~~a~~l-------Ga~~~i-~~~~~d~~~~~~~~~~~~ 95 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIEL-------GATECL-NPKDYDKPIYEVICEKTN 95 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHT-------TCSEEE-CGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHc-CCceeeccCChHHHHHHHHHc-------CCcEEE-cCCCchhHHHHHHHHhcC
Confidence 35678999996 88999999999999 6 5799999988777655543 333221 222 2 122222222
Q ss_pred -cccEEEEeccc
Q 016370 89 -MADLTINLAAI 99 (390)
Q Consensus 89 -~~d~Vih~a~~ 99 (390)
++|+||.+.+.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 49999999873
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=94.66 E-value=0.032 Score=43.56 Aligned_cols=77 Identities=17% Similarity=0.171 Sum_probs=56.0
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCC-------------------
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN------------------- 76 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D------------------- 76 (390)
.+-+|+|.| .|.+|.+-++-.+.. |..|.+++.+....+.+.+.. -.++..+
T Consensus 28 ~pa~VvViG-aGvaG~~Aa~~A~~l-GA~V~v~D~~~~~~~~l~~l~-------~~~i~~~~~~~~~~~~~~gyA~~~s~ 98 (183)
T d1l7da1 28 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLG-------GKFITVDDEAMKTAETAGGYAKEMGE 98 (183)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTT-------CEECCC--------------------
T ss_pred CCcEEEEEc-CcHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHhh-------cceEEEeccccccccccccchhhcCH
Confidence 445899999 799999999999999 999999999887766655431 1111111
Q ss_pred -C--CChhHHHHhhccccEEEEeccccC
Q 016370 77 -I--KHDSRLEGLIKMADLTINLAAICT 101 (390)
Q Consensus 77 -~--~d~~~~~~~~~~~d~Vih~a~~~~ 101 (390)
+ ...+.+.+.+.++|+||-.+-..+
T Consensus 99 ~~~~~~~~~l~~~l~~aDlVI~talipG 126 (183)
T d1l7da1 99 EFRKKQAEAVLKELVKTDIAITTALIPG 126 (183)
T ss_dssp ---CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHhhhhheeeeecCC
Confidence 1 124567777888999999887654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.62 E-value=0.019 Score=43.76 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
.+++|+|||+|| |.+|..-++.|++. |.+|++++.
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~-GA~VtVvap 44 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPT-GCKLTLVSP 44 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGG-TCEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEeC
Confidence 368899999996 88999999999999 999999964
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.61 E-value=0.055 Score=42.26 Aligned_cols=76 Identities=13% Similarity=0.114 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEe--CCCCC-hhHHHHhh--ccc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR--LNIKH-DSRLEGLI--KMA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~--~D~~d-~~~~~~~~--~~~ 90 (390)
.+.+|+|+|+ |-+|...++.+...+..+|+++++++++.+...+. +...+. -|-.+ .+.+.+.. .++
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~-------GA~~~in~~~~~~~~~~~~~~~~g~G~ 100 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV-------GATECISPKDSTKPISEVLSEMTGNNV 100 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH-------TCSEEECGGGCSSCHHHHHHHHHTSCC
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc-------CCcEEECccccchHHHHHHHHhccccc
Confidence 5678999985 99999999999998336899999998877655543 222222 12221 23333333 249
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|+||.+.+.
T Consensus 101 d~vi~~~g~ 109 (176)
T d1d1ta2 101 GYTFEVIGH 109 (176)
T ss_dssp CEEEECSCC
T ss_pred eEEEEeCCc
Confidence 999999874
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.60 E-value=0.033 Score=43.04 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=48.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCC-C-hhHHHHhhccccEE
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-H-DSRLEGLIKMADLT 93 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~-d-~~~~~~~~~~~d~V 93 (390)
.+.+|||.|+ |-+|...++.+... |.+|+++++++.+....++. +...+...-. + .+.+.....+.+.+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~-g~~v~~~~~~~~r~~~~k~~-------Ga~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL-------GADLVVNPLKEDAAKFMKEKVGGVHAA 97 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-------TCSEEECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEeec-ccchhhhhHHHhcC-CCeEeccCCCHHHhhhhhhc-------CcceecccccchhhhhcccccCCCceE
Confidence 4678999975 88999888888877 89999999988776655442 3333332222 1 23445555566666
Q ss_pred EEecc
Q 016370 94 INLAA 98 (390)
Q Consensus 94 ih~a~ 98 (390)
|.+++
T Consensus 98 v~~~~ 102 (168)
T d1rjwa2 98 VVTAV 102 (168)
T ss_dssp EESSC
T ss_pred EeecC
Confidence 66654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.57 E-value=0.016 Score=44.08 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=29.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET-PHKILALDVY 51 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~ 51 (390)
||+|.|.|+||.||...+.-+.+.+ .++|.++.-.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 6789999999999999999998863 4888887654
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.52 E-value=0.059 Score=40.23 Aligned_cols=84 Identities=7% Similarity=0.077 Sum_probs=55.5
Q ss_pred CCCEEEEEcCc---hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 16 KPVTICMIGAG---GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 16 ~~~~vlItGat---G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
+.++|.|.||| +-.|..+++.|++. ||+|+.+..+..... +...+ ..+.++-..+|.
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~-g~~v~pVnP~~~~i~------------G~~~~-------~sl~dlp~~iD~ 77 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEH-GYDVYPVNPKYEEVL------------GRKCY-------PSVLDIPDKIEV 77 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTCSEET------------TEECB-------SSGGGCSSCCSE
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHC-CCEEEEECCcccccC------------CCccc-------ccccccCccceE
Confidence 46789999999 88999999999998 999998875432211 22222 224444445888
Q ss_pred EEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEe
Q 016370 93 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137 (390)
Q Consensus 93 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~ 137 (390)
|+-+.. -..+..+++.|.+.|.+.+.+
T Consensus 78 v~i~vp------------------~~~~~~~~~e~~~~g~k~v~~ 104 (139)
T d2d59a1 78 VDLFVK------------------PKLTMEYVEQAIKKGAKVVWF 104 (139)
T ss_dssp EEECSC------------------HHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEeC------------------HHHHHHHHHHHHHhCCCEEEE
Confidence 776642 223567777787888334433
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=94.49 E-value=0.033 Score=44.59 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=49.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-cccE
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADL 92 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d~ 92 (390)
.+++++|+|-| .|.+|+++++.|.+. |.+|++.+.+......... .+.+.+ + ..+++. .||+
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~-Gakvvv~d~d~~~~~~~~~-------~g~~~~-----~---~~~~~~~~~DI 86 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVA-------LGHTAV-----A---LEDVLSTPCDV 86 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-------TTCEEC-----C---GGGGGGCCCSE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEecchHHHHHHHHh-------hccccc-----C---cccccccccee
Confidence 57899999998 999999999999999 9999999887655443322 122222 1 223444 5999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
++=||.
T Consensus 87 ~iPcA~ 92 (201)
T d1c1da1 87 FAPCAM 92 (201)
T ss_dssp EEECSC
T ss_pred eecccc
Confidence 998875
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.42 E-value=0.035 Score=44.24 Aligned_cols=75 Identities=13% Similarity=0.189 Sum_probs=50.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhhc--cc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLIK--MA 90 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~~--~~ 90 (390)
.+.+|||.|+ |-+|...+..+...+...|+++++++.+.+...+. +...+. +-.+. +.+.++.. ++
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~-------Ga~~~~-~~~~~~~~~~i~~~t~g~g~ 95 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-------GFEIAD-LSLDTPLHEQIAALLGEPEV 95 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-------TCEEEE-TTSSSCHHHHHHHHHSSSCE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc-------cccEEE-eCCCcCHHHHHHHHhCCCCc
Confidence 5679999985 89998888888777345788889888776655442 444443 22222 33444433 39
Q ss_pred cEEEEeccc
Q 016370 91 DLTINLAAI 99 (390)
Q Consensus 91 d~Vih~a~~ 99 (390)
|++|.+.|.
T Consensus 96 D~vid~vG~ 104 (195)
T d1kola2 96 DCAVDAVGF 104 (195)
T ss_dssp EEEEECCCT
T ss_pred EEEEECccc
Confidence 999999884
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.39 E-value=0.12 Score=46.23 Aligned_cols=78 Identities=17% Similarity=0.248 Sum_probs=49.8
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCChhhhccccc-----ccc---------------CCCCCeeEEe
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEP-----ESQ---------------TGADRIQFHR 74 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~-----~~~---------------~~~~~i~~~~ 74 (390)
+..||||.|++| +|..+++.|... |. ++.+++...-....+.+. ... ...-.+..+.
T Consensus 36 ~~~kVlvvG~Gg-lG~ei~k~L~~~-Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 113 (426)
T d1yovb1 36 DTCKVLVIGAGG-LGCELLKNLALS-GFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 113 (426)
T ss_dssp HHCCEEEECSST-THHHHHHHHHTT-TCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred hcCeEEEECCCH-HHHHHHHHHHHc-CCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence 456899999855 999999999998 75 788988754222221110 000 0112355566
Q ss_pred CCCCChhHHHHhhccccEEEEec
Q 016370 75 LNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 75 ~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
.++.+.. ..+++++|+||.+.
T Consensus 114 ~~i~~~~--~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 114 NKIQDFN--DTFYRQFHIIVCGL 134 (426)
T ss_dssp SCGGGBC--HHHHTTCSEEEECC
T ss_pred ccccchH--HHHHHhcchheecc
Confidence 6665533 36778899999775
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.35 E-value=0.16 Score=36.88 Aligned_cols=73 Identities=15% Similarity=0.194 Sum_probs=52.7
Q ss_pred CCCEEEEEcC----------chhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 16 KPVTICMIGA----------GGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 16 ~~~~vlItGa----------tG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
+-+||||.|+ --|.+.+.++.|.+. |++++.+..++.....-.+ -..-++..=-..+.+.+
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~-g~~~iliN~NP~TVstd~d--------~aD~lYfePlt~e~v~~ 76 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREE-GYRVINVNSNPATIMTDPE--------MADATYIEPIHWEVVRK 76 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH-TCEEEEECSCTTCGGGCGG--------GSSEEECSCCCHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc-CCeEEEecCchHhhhcChh--------hcceeeeecCCHHHHHH
Confidence 4579999998 558899999999999 9999999988865543222 11223344445677888
Q ss_pred hhcc--ccEEEEec
Q 016370 86 LIKM--ADLTINLA 97 (390)
Q Consensus 86 ~~~~--~d~Vih~a 97 (390)
+++. +|.|+-..
T Consensus 77 Ii~~E~pd~il~~~ 90 (127)
T d1a9xa3 77 IIEKERPDAVLPTM 90 (127)
T ss_dssp HHHHHCCSEEECSS
T ss_pred HHHHhCcCCeEEEe
Confidence 8874 99998443
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.32 E-value=0.038 Score=40.29 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=32.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI 55 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 55 (390)
.++|+|.| +|++|-.++..|.++ |.+|+++.+.+...
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~-g~~Vtli~~~~~~l 66 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTA-GVHVSLVETQPRLM 66 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSSTT
T ss_pred CCeEEEEC-cchhHHHHHHHhhcc-cceEEEEeeccccc
Confidence 57899988 899999999999999 99999999977543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.25 E-value=0.057 Score=41.96 Aligned_cols=75 Identities=16% Similarity=0.132 Sum_probs=48.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCC----hhHHHHhhc--c
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH----DSRLEGLIK--M 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d----~~~~~~~~~--~ 89 (390)
.+.+|+|.|++| +|...+..+....+..|+++++.+.+.+...+. +...+. |..+ .+....... +
T Consensus 28 ~g~~VlI~G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~-------GAd~~i-n~~~~~~~~~~~~~~~~~~G 98 (175)
T d1cdoa2 28 PGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-------GATDFV-NPNDHSEPISQVLSKMTNGG 98 (175)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-------TCCEEE-CGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEEecCC-ccchHHHHHHHHhhchheeecchHHHHHHHHHc-------CCcEEE-cCCCcchhHHHHHHhhccCC
Confidence 557899999766 666666667777467899999988877665553 332221 2221 223333332 4
Q ss_pred ccEEEEeccc
Q 016370 90 ADLTINLAAI 99 (390)
Q Consensus 90 ~d~Vih~a~~ 99 (390)
+|+||.+.|.
T Consensus 99 ~d~vid~~G~ 108 (175)
T d1cdoa2 99 VDFSLECVGN 108 (175)
T ss_dssp BSEEEECSCC
T ss_pred cceeeeecCC
Confidence 9999999874
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.20 E-value=0.082 Score=40.24 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
+.+|+++|.| -|.+|+-+++.|... |.+|+++..+|-. .++.. .+++++. .++++++..|+||
T Consensus 21 laGk~vvV~G-YG~vGrG~A~~~rg~-Ga~V~V~E~DPi~--alqA~-----mdGf~v~--------~~~~a~~~aDi~v 83 (163)
T d1v8ba1 21 ISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPIC--AIQAV-----MEGFNVV--------TLDEIVDKGDFFI 83 (163)
T ss_dssp CTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHH--HHHHH-----TTTCEEC--------CHHHHTTTCSEEE
T ss_pred ecCCEEEEec-ccccchhHHHHHHhC-CCEEEEEecCchh--hHHHH-----hcCCccC--------chhHccccCcEEE
Confidence 5789999999 999999999999999 9999999988732 22221 2455544 3778889999999
Q ss_pred Eecccc
Q 016370 95 NLAAIC 100 (390)
Q Consensus 95 h~a~~~ 100 (390)
-+.|..
T Consensus 84 TaTGn~ 89 (163)
T d1v8ba1 84 TCTGNV 89 (163)
T ss_dssp ECCSSS
T ss_pred EcCCCC
Confidence 888754
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=94.16 E-value=0.01 Score=47.28 Aligned_cols=39 Identities=8% Similarity=-0.029 Sum_probs=32.4
Q ss_pred CCCEEEE-EcCchhHHHHHHHHHHhhCCCeEEEEecCChhh
Q 016370 16 KPVTICM-IGAGGFIGSHLCEKILLETPHKILALDVYNDKI 55 (390)
Q Consensus 16 ~~~~vlI-tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 55 (390)
.+.+|+| +||+|-+|...++..... |.+|+++.|..+..
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~-Ga~vI~~v~~~~~~ 67 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNL 67 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTH
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhc-CCeEEEEEeccccc
Confidence 3456777 599999999999999999 99999998876543
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.15 E-value=0.036 Score=40.05 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
+++|+|.| +|++|-.++..|.+. |.+|+++.|.+.
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYANF-GTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CCeEEEEC-CCccceeeeeeeccc-ccEEEEEEecce
Confidence 47999999 899999999999999 999999998764
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.12 E-value=0.044 Score=40.03 Aligned_cols=37 Identities=22% Similarity=0.456 Sum_probs=32.4
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
.+++|+|.| +|++|-.++..|.+. |.+|+++.+.+..
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~-g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKA-GKKVTVIDILDRP 65 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhcc-ceEEEEEEecCcc
Confidence 457899997 899999999999999 9999999987643
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.12 E-value=0.019 Score=43.52 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=29.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLET-PHKILALDVY 51 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~ 51 (390)
||+|.|.|+||-||.....-+.+.+ .++|.++.-.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 6899999999999999999998753 4888887654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.04 E-value=0.033 Score=43.14 Aligned_cols=80 Identities=14% Similarity=0.168 Sum_probs=45.3
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh-CC---CeEEEEecCChhhhcccc---ccccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE-TP---HKILALDVYNDKIKHLLE---PESQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~-~g---~~V~~~~r~~~~~~~~~~---~~~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
..||.|.||++.-...++..|+.. .. -++++++..++..+.... ..........++.. ..+..+++++
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~~ 77 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTD 77 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSS
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccCC
Confidence 468999998554333455555543 12 379999998765432111 00000011222221 2346778899
Q ss_pred ccEEEEeccccC
Q 016370 90 ADLTINLAAICT 101 (390)
Q Consensus 90 ~d~Vih~a~~~~ 101 (390)
+|+||.+++...
T Consensus 78 AD~Vvitag~~~ 89 (167)
T d1u8xx1 78 VDFVMAHIRVGK 89 (167)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEECCCcCC
Confidence 999999998753
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.03 E-value=0.11 Score=37.39 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=52.7
Q ss_pred CEEEEEcCc---hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 18 VTICMIGAG---GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 18 ~~vlItGat---G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
|+|.|.|+| +-.|..+++.|++. ||+|+.+..+..... ++..+ ..+.++-..+|.++
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~-g~~V~pVnP~~~~i~------------G~~~y-------~sl~~lp~~~D~vv 61 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPNYDEIE------------GLKCY-------RSVRELPKDVDVIV 61 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTCSEET------------TEECB-------SSGGGSCTTCCEEE
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC-CCEEEEEcccccccc------------Ccccc-------ccchhccccceEEE
Confidence 689999998 78999999999998 999998864332111 22222 22444444589887
Q ss_pred EeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEE
Q 016370 95 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135 (390)
Q Consensus 95 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v 135 (390)
-+.. -..+..+++.|.+.| +.++
T Consensus 62 i~vp------------------~~~~~~~l~~~~~~g~k~v~ 85 (116)
T d1y81a1 62 FVVP------------------PKVGLQVAKEAVEAGFKKLW 85 (116)
T ss_dssp ECSC------------------HHHHHHHHHHHHHTTCCEEE
T ss_pred EEeC------------------HHHHHHHHHHHHhcCCceEE
Confidence 6542 122556777788888 5444
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=93.99 E-value=0.039 Score=39.81 Aligned_cols=35 Identities=23% Similarity=0.442 Sum_probs=31.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
+++|+|.| +|++|-.++..|.+. |.+|+++.|.+.
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVINGL-GAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhhcc-ccEEEEEeecch
Confidence 47899998 899999999999998 999999999764
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.93 E-value=0.13 Score=37.48 Aligned_cols=92 Identities=11% Similarity=0.093 Sum_probs=57.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhcc-ccEEEEe
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKM-ADLTINL 96 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~-~d~Vih~ 96 (390)
.+|+|.| +|.+|+.|++.+....+|+++++--..+...... ..++.++. .+.+.++.++ ++.++-+
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~-------I~Gi~V~~-----~~~l~~~~~~~i~iai~~ 70 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRP-------VRGGVIEH-----VDLLPQRVPGRIEIALLT 70 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE-------ETTEEEEE-----GGGHHHHSTTTCCEEEEC
T ss_pred ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE-------ECCEEEec-----HHHHHHHHhhcccEEEEe
Confidence 3799999 7999999999887666899888654433222111 23666653 3456666654 5555544
Q ss_pred ccccCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeecc
Q 016370 97 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC 140 (390)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss~ 140 (390)
.. ......+++.|.+.| +.+..++..
T Consensus 71 i~------------------~~~~~~I~d~l~~~gIk~I~~f~~~ 97 (126)
T d2dt5a2 71 VP------------------REAAQKAADLLVAAGIKGILNFAPV 97 (126)
T ss_dssp SC------------------HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CC------------------HHHHHHHHHHHHHcCCCEEeecCce
Confidence 31 112456788888888 666665543
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.80 E-value=0.043 Score=40.03 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
+++++|.| +|+||-.++..|.+. |.+|+++.+.+..
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~l-G~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRL-GSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhh-CcceeEEEecccc
Confidence 47999999 899999999999999 9999999997643
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.79 E-value=0.043 Score=39.69 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=32.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
+++|+|.| .|++|-.++..|.+. |.+|+++.|.+.
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~-g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRL-GIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhc-cccceeeehhcc
Confidence 57999999 899999999999998 999999998764
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.71 E-value=0.026 Score=45.04 Aligned_cols=40 Identities=18% Similarity=0.414 Sum_probs=32.8
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccc
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~ 60 (390)
|||.|.| .||+|..++..| ++ |++|++++-++.....+..
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~-g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SL-QNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TT-TSEEEEECSCHHHHHHHHT
T ss_pred CEEEEEC-CChhHHHHHHHH-HC-CCcEEEEECCHHHHHHHhh
Confidence 7899997 899999998655 67 9999999998876655543
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.67 E-value=0.18 Score=36.16 Aligned_cols=72 Identities=7% Similarity=0.074 Sum_probs=50.1
Q ss_pred CCCEEEEEcCc----------hhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHH
Q 016370 16 KPVTICMIGAG----------GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEG 85 (390)
Q Consensus 16 ~~~~vlItGat----------G~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~ 85 (390)
+.+||||.|+. -|.+.+.++.|.+. |++++.+..++.....-.. -..-++..=-..+.+.+
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~-g~~~IliN~NPeTVstd~d--------~aD~lYfeplt~e~v~~ 73 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED-GYETIMVNCNPETVSTDYD--------TSDRLYFEPVTLEDVLE 73 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT-TCEEEEECCCTTSSTTSTT--------SSSEEECCCCSHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc-CCeEEEEecChhhhhcChh--------hcCceEEccCCHHHHHH
Confidence 45799999984 48899999999999 9999999988865543222 12222333334566777
Q ss_pred hhc--cccEEEEe
Q 016370 86 LIK--MADLTINL 96 (390)
Q Consensus 86 ~~~--~~d~Vih~ 96 (390)
+++ ++|.||-.
T Consensus 74 Ii~~E~p~~ii~~ 86 (121)
T d1a9xa4 74 IVRIEKPKGVIVQ 86 (121)
T ss_dssp HHHHHCCSEEECS
T ss_pred HHHHhCCCEEEee
Confidence 776 38888743
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.49 E-value=0.1 Score=48.36 Aligned_cols=111 Identities=13% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCC-CeEEEEecCChhhhcc-----ccccc-------------cCCCC--CeeEEe
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHL-----LEPES-------------QTGAD--RIQFHR 74 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~-----~~~~~-------------~~~~~--~i~~~~ 74 (390)
...+|+|.|+ |-+|..+++.|... | .++++++...-....+ ..... ...-+ .++.+.
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~-GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~ 101 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLP-GIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE 101 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTT-TCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHh-cCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc
Confidence 3468999997 55999999999998 6 4688887643111111 00000 00011 233444
Q ss_pred CCCCCh-hHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeeccccccc
Q 016370 75 LNIKHD-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145 (390)
Q Consensus 75 ~D~~d~-~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 145 (390)
.+..+. +.-...+.++|+||.+.. |......+-++|++.+..+|++++.+.||.
T Consensus 102 ~~~~~~~~~~~~~~~~~dvVv~~~~-----------------~~~~~~~l~~~c~~~~ip~i~~~~~G~~G~ 156 (529)
T d1yova1 102 ESPENLLDNDPSFFCRFTVVVATQL-----------------PESTSLRLADVLWNSQIPLLICRTYGLVGY 156 (529)
T ss_dssp SCHHHHHHSCGGGGGGCSEEEEESC-----------------CHHHHHHHHHHHHHHTCCEEEEEEETTEEE
T ss_pred CCchhhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeccCCEEE
Confidence 333221 111245667999997642 122244566888888888999999888775
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.43 E-value=0.057 Score=38.79 Aligned_cols=35 Identities=20% Similarity=0.399 Sum_probs=31.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
+++++|.| +|++|-.++..|.+. |++|+++.+.+.
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~-g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKL-GAQVSVVEARER 55 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhc-ccceEEEeeecc
Confidence 57899998 899999999999999 999999998764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.43 E-value=0.064 Score=39.70 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=33.6
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI 55 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 55 (390)
.+++|+|.| +|++|-.++..|.+. |.+|.++.+.+...
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~-g~~Vtvie~~~~~l 71 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKA-NMHVTLLDTAARVL 71 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSSTT
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhh-Ccceeeeeeccccc
Confidence 457999998 899999999999999 99999999977543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=93.19 E-value=0.067 Score=38.70 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=32.3
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
-+++++|.| +|+||-.++..|.+. |.+|+++.+.+.
T Consensus 21 ~p~~i~IiG-~G~ig~E~A~~l~~~-G~~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIG-AGVIGLELGSVWARL-GAEVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CCCeEEEEC-CChHHHHHHHHHHHc-CCceEEEEeecc
Confidence 347899999 899999999999999 999999998764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.13 E-value=0.065 Score=39.17 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=31.8
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
+++|+|.| +|++|-.++..|.+. |.+|+++.|.+.
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~-G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSAL-GSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcC-CcEEEEEeeccc
Confidence 47999999 789999999999999 999999999764
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=92.89 E-value=0.027 Score=40.07 Aligned_cols=38 Identities=8% Similarity=0.138 Sum_probs=30.0
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
..+++|+|+|.| +|.-|.-++..|.+. .-+|+.+.|++
T Consensus 28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~-ak~v~~~~~r~ 65 (107)
T d2gv8a2 28 ELFVGESVLVVG-GASSANDLVRHLTPV-AKHPIYQSLLG 65 (107)
T ss_dssp GGGTTCCEEEEC-SSHHHHHHHHHHTTT-SCSSEEEECTT
T ss_pred hhcCCCeEEEEC-CCCCHHHHHHHHHHh-cCEEEEEEecC
Confidence 457899999999 779999999999987 55555555544
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=92.82 E-value=0.06 Score=46.37 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=32.5
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
++|||+|.| +|.-|-..|..|.++ |++|.++.+++.
T Consensus 1 k~KKI~IIG-aG~sGL~aA~~L~k~-G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVG-AGFSGAVIGRQLAEK-GHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhC-CCCEEEEECCCC
Confidence 368999999 899999999999998 999999998764
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=92.77 E-value=0.064 Score=40.99 Aligned_cols=71 Identities=14% Similarity=0.102 Sum_probs=39.2
Q ss_pred CCEEEEEcCchhHHHHHH-HHHHhhCCCeEEEE-ecCChhhh-ccccccccCCCCCeeEEeCCCCChhHHHHhh--cccc
Q 016370 17 PVTICMIGAGGFIGSHLC-EKILLETPHKILAL-DVYNDKIK-HLLEPESQTGADRIQFHRLNIKHDSRLEGLI--KMAD 91 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~-~~L~~~~g~~V~~~-~r~~~~~~-~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~--~~~d 91 (390)
.+||.|.| +|.+|+.+. +.|.+.+..+++++ +|++.... ...+ ..++.+... +.+++.+.. .++|
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~------~~~i~~~~~---~~d~l~~~~~~~~iD 73 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ------RMGVTTTYA---GVEGLIKLPEFADID 73 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH------HTTCCEESS---HHHHHHHSGGGGGEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh------hcCCccccc---ceeeeeecccccccC
Confidence 36899999 899998655 54444456777776 45443211 1111 123444332 233343332 4689
Q ss_pred EEEEec
Q 016370 92 LTINLA 97 (390)
Q Consensus 92 ~Vih~a 97 (390)
+||.+.
T Consensus 74 iVf~AT 79 (157)
T d1nvmb1 74 FVFDAT 79 (157)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 999864
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=92.56 E-value=0.074 Score=38.72 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=32.6
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
+++++|.| +|+||-.++..|.+. |.+|+++.|.+..
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~-G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRI-GSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhc-CCeEEEEEEcccc
Confidence 57899999 899999999999999 9999999997754
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.32 E-value=0.084 Score=38.30 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
++|+|.| +|++|-.++..|.+. |++|+++.+.+.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~-g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEA-GYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHT-TCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcc-cceEEEEecccc
Confidence 6788888 899999999999999 999999998653
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=92.25 E-value=0.1 Score=38.03 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
+++++|.| +|+||-.++..|.+. |.+|+++.+.+.
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~-G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTL-GSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcC-CCEEEEEEeecc
Confidence 57899999 899999999999999 999999998764
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.16 E-value=0.082 Score=38.42 Aligned_cols=33 Identities=6% Similarity=0.061 Sum_probs=29.9
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~ 51 (390)
+++++|.| +|+||-.++..|.+. |.+|+++.|+
T Consensus 20 P~~vvIIG-gG~iG~E~A~~l~~l-G~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVG-ASYVALECAGFLAGI-GLDVTVMVRS 52 (122)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CCeEEEEC-CCccHHHHHHHHhhc-CCeEEEEEec
Confidence 46899999 899999999999999 9999999874
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=91.90 E-value=0.16 Score=36.51 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=32.7
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
.+++|+|.| +|++|-.++..|.+. |.+|.++.|.+..
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~-g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNAT-GRRTVMLVRTEPL 57 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCTT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhc-chhheEeeccchh
Confidence 468999998 899999999999998 9999999997643
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.74 E-value=0.18 Score=40.21 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=45.2
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh-hcccccc-c-cCCCCCeeEEe-CCCCChhHHHHhhc-cccE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPE-S-QTGADRIQFHR-LNIKHDSRLEGLIK-MADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-~~~~~~~-~-~~~~~~i~~~~-~D~~d~~~~~~~~~-~~d~ 92 (390)
|||+|+|. +-.|..+++.|++. |++|.++...++.. ....... . .....++.++. .++.+++.++.+-+ ++|+
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~-g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dl 78 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAA-GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDV 78 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHT-TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred CeEEEEec-CHHHHHHHHHHHHC-CCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccc
Confidence 68999964 55799999999998 89987665332211 1000000 0 00013566655 45666554444333 4999
Q ss_pred EEEecc
Q 016370 93 TINLAA 98 (390)
Q Consensus 93 Vih~a~ 98 (390)
+|-+..
T Consensus 79 ii~~g~ 84 (203)
T d2blna2 79 IFSFYY 84 (203)
T ss_dssp EEEESC
T ss_pred eeeeec
Confidence 998764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=91.62 E-value=0.13 Score=41.87 Aligned_cols=72 Identities=15% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc-ccc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK-MAD 91 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~-~~d 91 (390)
..+++++|+|-| -|.+|+++++.|.+. |.+|++.+.+.......... .+...+ +.+ +++. .||
T Consensus 35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~-Gakvv~~d~~~~~~~~~~~~------~g~~~~-----~~~---~~~~~~cD 98 (230)
T d1leha1 35 DSLEGLAVSVQG-LGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAE------EGADAV-----APN---AIYGVTCD 98 (230)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH------HCCEEC-----CGG---GTTTCCCS
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEeecccHHHHHHHHHh------cCCccc-----CCc---cccccccc
Confidence 357889999998 999999999999999 99999988776554433221 122221 222 2333 499
Q ss_pred EEEEecccc
Q 016370 92 LTINLAAIC 100 (390)
Q Consensus 92 ~Vih~a~~~ 100 (390)
+++=||...
T Consensus 99 Il~PcA~~~ 107 (230)
T d1leha1 99 IFAPCALGA 107 (230)
T ss_dssp EEEECSCSC
T ss_pred Eeccccccc
Confidence 999998644
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=91.58 E-value=0.074 Score=44.69 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=30.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
|+|+|.|| |..|-..+..|.++ |++|+++.+.+.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~-G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSR-GTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTT-TCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 68999995 99999999999999 999999998653
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=91.55 E-value=0.21 Score=38.04 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=39.7
Q ss_pred CEEEEEcCchhHHHH-HHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEE
Q 016370 18 VTICMIGAGGFIGSH-LCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTIN 95 (390)
Q Consensus 18 ~~vlItGatG~iG~~-l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih 95 (390)
+||.|.| +|.+|+. .+..|.+.++++++++ ++++.....+.+. -++ ++. +.++.++.++|+|+-
T Consensus 2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~------~~~-----~~~--~~~~~l~~~~D~V~I 67 (164)
T d1tlta1 2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES------WRI-----PYA--DSLSSLAASCDAVFV 67 (164)
T ss_dssp EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH------HTC-----CBC--SSHHHHHTTCSEEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhc------ccc-----ccc--ccchhhhhhcccccc
Confidence 5899999 6889975 5666766667887765 4555443332221 011 122 234555678999885
Q ss_pred ec
Q 016370 96 LA 97 (390)
Q Consensus 96 ~a 97 (390)
+.
T Consensus 68 ~t 69 (164)
T d1tlta1 68 HS 69 (164)
T ss_dssp CS
T ss_pred cc
Confidence 54
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.49 E-value=0.085 Score=41.12 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHL 58 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~ 58 (390)
++++++|||.|+ |..++.++..|.+. | +|+++.|+.+..+.+
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~-~-~i~I~nR~~~ka~~l 56 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKD-N-NIIIANRTVEKAEAL 56 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSS-S-EEEEECSSHHHHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHccc-c-ceeeehhhhhHHHHH
Confidence 478899999995 55799999998765 5 899999987665443
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.40 E-value=0.11 Score=42.67 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=30.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
+||+|.| .|..|-..+..|.++ |++|.+++|..
T Consensus 7 ~kVvVIG-aGiaGl~~A~~L~~~-G~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLG-SGVIGLSSALILARK-GYSVHILARDL 39 (268)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CcEEEEC-ccHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 5899999 899999999999999 99999999864
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=91.31 E-value=0.15 Score=38.99 Aligned_cols=77 Identities=19% Similarity=0.166 Sum_probs=44.0
Q ss_pred CEEEEEcCchhHHHHHHHH-HHhh----CCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccE
Q 016370 18 VTICMIGAGGFIGSHLCEK-ILLE----TPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADL 92 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~-L~~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~ 92 (390)
|||.|.||.+ +|..++-. |++. ...++.+++..+...................+... .+..+.++++|+
T Consensus 1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t-----~~~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS-----DTFEGAVVDAKY 74 (162)
T ss_dssp CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC-----SSHHHHHTTCSE
T ss_pred CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe-----cCcccccCCCCE
Confidence 6899999854 56555533 3332 13689999998765442221111001112222221 234567789999
Q ss_pred EEEecccc
Q 016370 93 TINLAAIC 100 (390)
Q Consensus 93 Vih~a~~~ 100 (390)
||..|+..
T Consensus 75 VVita~~~ 82 (162)
T d1up7a1 75 VIFQFRPG 82 (162)
T ss_dssp EEECCCTT
T ss_pred EEEecccC
Confidence 99999865
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.17 E-value=0.44 Score=39.92 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
.+++++|+|-| .|.+|+++++.|.+. |.+|++++-
T Consensus 33 ~L~gktvaIqG-fGnVG~~~A~~L~e~-Gakvv~vsD 67 (293)
T d1hwxa1 33 GFGDKTFAVQG-FGNVGLHSMRYLHRF-GAKCVAVGE 67 (293)
T ss_dssp SSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEEc
Confidence 57789999999 799999999999998 999988864
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=90.91 E-value=0.15 Score=43.36 Aligned_cols=36 Identities=17% Similarity=0.351 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
-++|+|+|.| +|..|-..+..|.++ |++|.++.+.+
T Consensus 28 ~~pkkV~IIG-aG~aGLsaA~~L~~~-G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVG-AGMAGLSAAYVLAGA-GHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEEC-CBHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 4678999999 899999999999999 99999999865
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=90.89 E-value=0.12 Score=43.45 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
+|||+|.| +|.-|-..+..|.++ |++|.++.+.+
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~-G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIH-GLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTT-SCEEEEECSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 48999998 899999999999998 99999999765
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.84 E-value=0.11 Score=40.80 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=31.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~ 53 (390)
++||+|.| +|..|-..+..|.++ |+ +|+++.+.+.
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~~~-G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLARL-GYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHC-CCCeEEEEEecCc
Confidence 57999999 899999999999999 88 5999998653
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=90.80 E-value=0.56 Score=35.25 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=26.9
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhh
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI 55 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 55 (390)
||.+.| .|.+|..++++|++. |+.+ +..|..++.
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~-g~~~-~~~~~~~~~ 35 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARR-FPTL-VWNRTFEKA 35 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTT-SCEE-EECSSTHHH
T ss_pred eEEEEe-HHHHHHHHHHHHHhC-CCEE-EEeCCHHHH
Confidence 688888 699999999999987 7866 456665443
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.78 E-value=0.25 Score=38.42 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=42.6
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--cccEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--MADLTI 94 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~~d~Vi 94 (390)
+||.|.| .|.+|+..++.|...++++|+++ +++++....+..... ......++ +++++++. ++|+|+
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~ll~~~~iD~v~ 71 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN--YPESTKIH-------GSYESLLEDPEIDALY 71 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT--CCTTCEEE-------SSHHHHHHCTTCCEEE
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc--cccceeec-------CcHHHhhhccccceee
Confidence 5899999 68899999999988667888865 565544333222100 01112221 34555554 489999
Q ss_pred Eec
Q 016370 95 NLA 97 (390)
Q Consensus 95 h~a 97 (390)
-+.
T Consensus 72 I~t 74 (184)
T d1ydwa1 72 VPL 74 (184)
T ss_dssp ECC
T ss_pred ecc
Confidence 553
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=90.70 E-value=0.11 Score=43.31 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=29.0
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
|+|.| +|.+|..++.+|.++ |++|+++++..
T Consensus 7 vvIIG-aGi~Gls~A~~La~~-G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKE-NKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 99999 899999999999999 99999999864
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.56 E-value=0.021 Score=44.47 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=61.5
Q ss_pred CEEEEEcC-chhHHHHHHHHHHhhCC---CeEEEEecCChhh--hccccc---cccCCCCCeeEEeCCCCChhHHHHhhc
Q 016370 18 VTICMIGA-GGFIGSHLCEKILLETP---HKILALDVYNDKI--KHLLEP---ESQTGADRIQFHRLNIKHDSRLEGLIK 88 (390)
Q Consensus 18 ~~vlItGa-tG~iG~~l~~~L~~~~g---~~V~~~~r~~~~~--~~~~~~---~~~~~~~~i~~~~~D~~d~~~~~~~~~ 88 (390)
|||.|.|| +.+.+..++..++.... -++..++..+... +.+... ........+.+. ...+..+.++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~td~~~al~ 76 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH-----LTLDRRRALD 76 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHT
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee-----ecCCchhhcC
Confidence 58999997 34555666666655422 4788999876431 111100 000000111111 1233466788
Q ss_pred cccEEEEeccccCCccccCC------------------hhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 89 MADLTINLAAICTPADYNTR------------------PLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~------------------~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
++|+||.+|+......+..+ .......|+.-.+.+++..++.. .-++..-|
T Consensus 77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt 146 (169)
T d1s6ya1 77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT 146 (169)
T ss_dssp TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 99999999986532111000 00112357777788888888877 44444433
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=90.54 E-value=0.37 Score=37.31 Aligned_cols=70 Identities=10% Similarity=0.090 Sum_probs=40.0
Q ss_pred CCCCEEEEEcCchhHHHH-HHHHHHhhCC-CeEEEE-ecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhc--c
Q 016370 15 IKPVTICMIGAGGFIGSH-LCEKILLETP-HKILAL-DVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIK--M 89 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~-l~~~L~~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~--~ 89 (390)
|+.+||.|.| +|.+|+. .+..+.+.++ ++|+++ +++++....+.+.. +...+. ++++++++ +
T Consensus 1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~------~~~~~~------~~~~ell~~~~ 67 (181)
T d1zh8a1 1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV------GNPAVF------DSYEELLESGL 67 (181)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH------SSCEEE------SCHHHHHHSSC
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc------ccccee------eeeeccccccc
Confidence 4556899999 6899986 4666766423 577754 55554443332210 111111 23556665 4
Q ss_pred ccEEEEec
Q 016370 90 ADLTINLA 97 (390)
Q Consensus 90 ~d~Vih~a 97 (390)
+|+|+-+.
T Consensus 68 id~v~I~t 75 (181)
T d1zh8a1 68 VDAVDLTL 75 (181)
T ss_dssp CSEEEECC
T ss_pred cceeeccc
Confidence 89998654
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=90.53 E-value=0.18 Score=39.27 Aligned_cols=37 Identities=14% Similarity=0.327 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
-++|+|+|.| +|..|-..+..|.++ ||+|+++.+.+.
T Consensus 41 ~~~k~V~IIG-aGPAGL~AA~~la~~-G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVG-AGPAGLAFAINAAAR-GHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred CCCcEEEEEC-ccHHHHHHHHHHHhh-ccceEEEeccCc
Confidence 3568999999 899999999999999 999999998753
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=90.26 E-value=0.19 Score=38.50 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=29.7
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCC--CeEEEEecCC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETP--HKILALDVYN 52 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g--~~V~~~~r~~ 52 (390)
+|||+|.| .|++|-.++..|.+. + .+|+++.+.+
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~-~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLA-DPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHH-CTTSEEEEECSCS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHc-CCCCcEEEEECCC
Confidence 68999999 899999999999997 5 5788888765
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=90.04 E-value=0.18 Score=41.40 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=31.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
.+||+|.| .|..|..++..|.++ |++|+++.+.+.
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~~~-G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLRDA-GVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 46899999 899999999999998 999999998654
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=89.86 E-value=0.27 Score=37.57 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=28.3
Q ss_pred CEEEEEcCchhHHHH-HHHHHHhhCCCeEEEEecCChhhhcc
Q 016370 18 VTICMIGAGGFIGSH-LCEKILLETPHKILALDVYNDKIKHL 58 (390)
Q Consensus 18 ~~vlItGatG~iG~~-l~~~L~~~~g~~V~~~~r~~~~~~~~ 58 (390)
|||.|.| .|.+|+. .+..|.+.++.++.++++++.....+
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~ 42 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTL 42 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHH
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHH
Confidence 6899999 5667765 56666666577888888776555444
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.69 E-value=0.17 Score=38.20 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=30.5
Q ss_pred CCCEEEEE-cCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 16 KPVTICMI-GAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 16 ~~~~vlIt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
.++.++|. .+.||+|-.++..|.+. |.+|+++.+.+.
T Consensus 38 ~~~~vvi~d~ggg~ig~e~A~~la~~-G~~Vtlv~~~~~ 75 (156)
T d1djqa2 38 IGKRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVHL 75 (156)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSCT
T ss_pred cCCceEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCc
Confidence 34566665 36799999999999999 999999998764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.58 E-value=0.15 Score=43.25 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=31.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
|..|+|.| +|..|..+++.|.++ |++|.++.+++.
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~-g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKL-NKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGG-TCCEEEECSSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhC-CCcEEEEECCCC
Confidence 45799999 899999999999998 999999998763
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.50 E-value=0.19 Score=40.05 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=26.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
|||++.| ++..|..+++.|+++ |++|.++..
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~-~~~i~~V~t 31 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKE-GHEVVGVFT 31 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHT-TCEEEEEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHC-CCcEEEEEc
Confidence 7899997 678899999999998 999887653
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=89.07 E-value=0.62 Score=34.20 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=30.6
Q ss_pred CCCEEEEEcCc---hhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 16 KPVTICMIGAG---GFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 16 ~~~~vlItGat---G~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
++++|.|.||| +-.|..+++.|++. ||+++.+.-++
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~-g~~~~~v~~~~ 50 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQ-GYRVLPVNPRF 50 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHT-TCEEEEECGGG
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcC-CCCceEEEecc
Confidence 56899999998 67999999999998 99998876543
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=88.68 E-value=0.54 Score=37.27 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=48.9
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhcccccc------ccCCCCCeeEEeCCCCChhHHHHhhcc
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE------SQTGADRIQFHRLNIKHDSRLEGLIKM 89 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~i~~~~~D~~d~~~~~~~~~~ 89 (390)
+.|||+++| ++..+..+++.|++. |++|.++...++......... ......++.+......+.+.+.+.++.
T Consensus 2 ~~mKI~f~G-~~~~~~~~L~~L~~~-~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (206)
T d1fmta2 2 ESLRIIFAG-TPDFAARHLDALLSS-GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAE 79 (206)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHT-TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHH
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHhC-CCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhh
Confidence 457999997 577888999999988 899776654332111000000 000113566666666666666666664
Q ss_pred --ccEEEEecc
Q 016370 90 --ADLTINLAA 98 (390)
Q Consensus 90 --~d~Vih~a~ 98 (390)
+|++|-+..
T Consensus 80 ~~~d~~v~~~~ 90 (206)
T d1fmta2 80 LQADVMVVVAY 90 (206)
T ss_dssp TTCSEEEEESC
T ss_pred hcceEEEeecc
Confidence 898887664
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.44 E-value=0.29 Score=38.40 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=28.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhh-CCCeEEEEecCC
Q 016370 18 VTICMIGAGGFIGSHLCEKILLE-TPHKILALDVYN 52 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~-~g~~V~~~~r~~ 52 (390)
|||+|.| +|++|-.++..|.+. ++.+|+++.|.+
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 7899999 679999999999886 246788888754
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=88.32 E-value=3.6 Score=31.82 Aligned_cols=96 Identities=9% Similarity=0.081 Sum_probs=62.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhC--CCeEEEEecCChhhhccccccccCCCCCeeEEeCCC------------------
Q 016370 18 VTICMIGAGGFIGSHLCEKILLET--PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI------------------ 77 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~------------------ 77 (390)
+||.|.| -|-.|.+++.+|.+.. +.+.++++.+...+.... ....+..+.-
T Consensus 1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~--------a~~ki~iG~~~t~G~G~g~~p~~g~~aa 71 (194)
T d1w5fa1 1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASN--------ADVKIQIGENITRGLGAGGRPEIGEQAA 71 (194)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCC--------CSEEEECCTTTTTTSCCTTCHHHHHHHH
T ss_pred CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCC--------cceEEecccccCCCcccccCchhhHhHH
Confidence 4788998 6778999999998871 245566665544333211 1222333211
Q ss_pred -CChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcE
Q 016370 78 -KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134 (390)
Q Consensus 78 -~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~ 134 (390)
.+.+.+.+.+.++|.||-+||..+.. -..++--+.+.|++.+.-.
T Consensus 72 ~e~~~~I~~~l~~~d~vfi~AGlGGgT------------GtgaapviA~~ake~g~lv 117 (194)
T d1w5fa1 72 LESEEKIREVLQDTHMVFITAGFGGGT------------GTGASPVIAKIAKEMGILT 117 (194)
T ss_dssp HHTHHHHHHHTTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCc------------ccchHHHHHHHHHHcCCce
Confidence 14567888888999999999987642 2344667889999998433
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.23 E-value=0.21 Score=41.80 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=30.5
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChh
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK 54 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 54 (390)
+|+|.| .|-.|..++..|.+. |++|.++.+.+..
T Consensus 4 ~V~IvG-aGp~Gl~~A~~L~~~-G~~v~vlE~~~~~ 37 (292)
T d1k0ia1 4 QVAIIG-AGPSGLLLGQLLHKA-GIDNVILERQTPD 37 (292)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHH-TCCEEEECSSCHH
T ss_pred CEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 599999 569999999999999 9999999997643
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=87.70 E-value=0.34 Score=39.61 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~ 51 (390)
.+++++|+|-| .|.+|+++++.|.+. |.+|++++-.
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~-Gakvv~vsD~ 63 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKM-GAKVIAVSDI 63 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEECS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEeecc
Confidence 56889999998 999999999999999 9999887643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=87.13 E-value=0.37 Score=34.35 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=28.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~ 53 (390)
+++++|.|| |++|-.++..|.+. .+.+|+++.+.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 579999995 99999999776654 1568999988654
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=87.05 E-value=0.56 Score=37.78 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCCh
Q 016370 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND 53 (390)
Q Consensus 15 ~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 53 (390)
...++|+|.| +|..|-..+..|.++ |++|+++.+.+.
T Consensus 47 ~~~k~VvIIG-aGpAGl~aA~~l~~~-G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVG-AGPSGSEAARVLMES-GYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred cCCceEEEEc-ccHHHHHHHHHHHHh-ccceeeEeeccc
Confidence 3568999999 899999999999999 999999988653
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.04 E-value=0.33 Score=41.66 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=31.2
Q ss_pred CCCEEEEEcCchhHHHHHHHHHHhhC-CCeEEEEecCCh
Q 016370 16 KPVTICMIGAGGFIGSHLCEKILLET-PHKILALDVYND 53 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~ 53 (390)
.+|+|+|.| +|.-|-..+..|++++ +++|+++.|.+.
T Consensus 3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 457899999 8999999999998872 379999999764
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.81 E-value=1.8 Score=37.13 Aligned_cols=111 Identities=17% Similarity=0.117 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhhccc
Q 016370 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLIKMA 90 (390)
Q Consensus 14 ~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~~~~ 90 (390)
++.+.|||=++ .+.-|....+.|... |.+|+-+.+........... .-.+=+.+..|+.++ +.+.++++++
T Consensus 3 PL~girVld~~-~~~agp~~~~~lad~-GA~VikvE~p~~~~~~~~~~----~nr~K~si~lDl~~~~g~~~~~~Lv~~a 76 (359)
T d1x74a1 3 PLSGLRVVELA-GIGPGPHAAMILGDL-GADVVRIDRPSSVDGISRDA----MLRNRRIVTADLKSDQGLELALKLIAKA 76 (359)
T ss_dssp TTTTCEEEEEC-CSTHHHHHHHHHHHT-TCEEEEEECC-----CCCCG----GGCSCEEEECCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEcC-CchHHHHHHHHHHHh-CCEEEEECCCCCCCchhhhh----hhCCCeEEEEeCcCHHHHHHHHHHHhhC
Confidence 56777777555 344455555555555 99999997653221111111 113557888999875 4667888899
Q ss_pred cEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 91 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
|+||+.-..........+ .+.+++.+.++||+|-. -||..
T Consensus 77 Dv~i~n~~pg~~~~lgl~---------------~~~l~~~nP~lI~~sis-gfG~~ 116 (359)
T d1x74a1 77 DVLIEGYRPGVTERLGLG---------------PEECAKVNDRLIYARMT-GWGQT 116 (359)
T ss_dssp SEEEECSCTTHHHHHTCS---------------HHHHHHHCTTCEEEEEE-SSCSS
T ss_pred CEEEecCCCCchhhcCCC---------------HHHHHhhcCCceEEEEe-CCCCC
Confidence 999987543211111111 13445556899999953 35543
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=86.67 E-value=2.7 Score=32.54 Aligned_cols=49 Identities=6% Similarity=-0.026 Sum_probs=29.5
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~ 140 (390)
..|+||-+.|..+...........+..| ...+++.+++.+.++|.++..
T Consensus 71 ~~D~vvi~~G~ND~~~~~~~~~~~~~~~---l~~li~~~~~~~~~~vl~~~~ 119 (208)
T d2o14a2 71 PGDYFMLQLGINDTNPKHKESEAEFKEV---MRDMIRQVKAKGADVILSTPQ 119 (208)
T ss_dssp TTCEEEEECCTGGGCGGGCCCHHHHHHH---HHHHHHHHHTTTCEEEEECCC
T ss_pred CCCEEEEEcCCCcccccccccHHHHHHH---HHHHHHHHHhcCCceeecccc
Confidence 4799888877664322222333444444 456777788878677777653
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=86.55 E-value=0.049 Score=41.29 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=33.8
Q ss_pred EEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEEEec
Q 016370 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97 (390)
Q Consensus 22 ItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vih~a 97 (390)
+.| +|.+|+++++.|.+. ++.+.+.+|++++.+.+.+.. . .... ...++++.+|+||-+.
T Consensus 4 fIG-~G~mg~~l~~~L~~~-~~~~~v~~R~~~~~~~l~~~~------~-----~~~~---~~~~~~~~~DiVil~v 63 (153)
T d2i76a2 4 FVG-TGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVY------G-----GKAA---TLEKHPELNGVVFVIV 63 (153)
T ss_dssp EES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHT------C-----CCCC---SSCCCCC---CEEECS
T ss_pred EEe-CcHHHHHHHHHHHhC-CCEEEEEeCChhhhcchhhcc------c-----cccc---chhhhhccCcEEEEec
Confidence 445 999999999877554 444567888887776665421 1 0111 1234567789999664
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=86.35 E-value=0.45 Score=39.12 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=31.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
..+++++|+|-| .|.+|+++++.|.+. |.+|++++-
T Consensus 32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~-GakvvavsD 67 (255)
T d1bgva1 32 DTLVGKTVALAG-FGNVAWGAAKKLAEL-GAKAVTLSG 67 (255)
T ss_dssp CCSTTCEEEECC-SSHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEec
Confidence 356789999999 899999999999999 999988754
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.11 E-value=0.33 Score=39.00 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=29.2
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
|+|.| +|..|...+..|.++ |++|.++.+.+
T Consensus 8 viViG-aG~~Gl~~A~~La~~-G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVD-GKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHC-CCCEEEEcCCC
Confidence 89999 999999999999999 99999999975
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.01 E-value=0.079 Score=43.11 Aligned_cols=28 Identities=29% Similarity=0.423 Sum_probs=24.5
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEE
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILA 47 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~ 47 (390)
|||+|.| +|.+|-..+.+|.++ |++|.+
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~-G~~v~v 28 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHER-YHSVLQ 28 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH-HTTTSS
T ss_pred CEEEEEC-chHHHHHHHHHHHHC-CCCceE
Confidence 6899999 899999999999999 876543
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=85.93 E-value=2.1 Score=37.43 Aligned_cols=116 Identities=13% Similarity=0.115 Sum_probs=68.6
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC-hhhhccccccccCCCCCeeEEeCCCCCh---hHHHHhhc
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN-DKIKHLLEPESQTGADRIQFHRLNIKHD---SRLEGLIK 88 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~i~~~~~D~~d~---~~~~~~~~ 88 (390)
.++.+.|||=++ +...|....+.|... |.+|+-+.+.. ..............-.+-+.+..|+.++ +.+.++++
T Consensus 7 gPL~GirVld~~-~~~agp~~~~~Lad~-GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~ 84 (402)
T d1xk7a1 7 GPLAGLRVVFSG-IEIAGPFAGQMFAEW-GAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLME 84 (402)
T ss_dssp STTTTCEEEEEC-CSSHHHHHHHHHHHT-TCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeC-ChhHHHHHHHHHHHh-CCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHh
Confidence 367888998766 455566666666666 99999998643 1111110000000113557888999875 46678888
Q ss_pred cccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 89 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
.+|+||+.--.........+ .+..++.+.++||+|-.. ||..
T Consensus 85 ~aDv~i~n~rpg~~~~lGl~---------------~~~L~~~nP~lI~~sisg-fG~~ 126 (402)
T d1xk7a1 85 TTDIFIEASKGPAFARRGIT---------------DEVLWQHNPKLVIAHLSG-FGQY 126 (402)
T ss_dssp TCSEEEEECSSSHHHHTTCC---------------HHHHHHHCTTCEEEEEES-SCSS
T ss_pred hcCCceeeeccccccccccc---------------ccchhhccccccceeeec-ccCC
Confidence 99999987543211111111 134555668999999543 6643
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.83 E-value=0.46 Score=39.06 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=30.4
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~ 53 (390)
+++|+|.| .|..|..++..|.+. |. +|.++.+.+.
T Consensus 1 ~~~V~IvG-aG~aGl~~A~~L~~~-Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 1 PIDILIAG-AGIGGLSCALALHQA-GIGKVTLLESSSE 36 (288)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhC-CCCeEEEEeCCCC
Confidence 46899999 899999999999998 84 8999998764
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.17 E-value=1.9 Score=35.90 Aligned_cols=33 Identities=18% Similarity=0.010 Sum_probs=27.0
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
|++=--.||-.|.+|++.|+.+ |++|+.+.+..
T Consensus 38 R~ItN~SSGk~G~alA~~~~~~-Ga~V~li~g~~ 70 (290)
T d1p9oa_ 38 RFLDNFSSGRRGATSAEAFLAA-GYGVLFLYRAR 70 (290)
T ss_dssp EEEEECCCCHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred eEeCCCCchHHHHHHHHHHHHc-CCEEEEEecCC
Confidence 3444445799999999999999 99999997754
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=84.57 E-value=3.2 Score=31.32 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=27.1
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~ 51 (390)
|||.|=| -|=||+.+.|.|..+ +.+|.++.-.
T Consensus 1 ikigING-fGRIGR~~~R~l~~~-~i~iv~INd~ 32 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSR-GVEVALINDL 32 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECS
T ss_pred CEEEEEC-CcHHHHHHHHHHhcC-CCEEEEECCC
Confidence 5788887 899999999999988 8998887643
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=84.36 E-value=0.76 Score=37.30 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=30.8
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
.++++++|+|-| .|.+|+++++.|.++.|..|+++.-
T Consensus 28 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 28 DTLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence 357889999999 6999999999998755888887754
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.26 E-value=4.5 Score=31.71 Aligned_cols=95 Identities=12% Similarity=0.108 Sum_probs=61.9
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhC--CCeEEEEecCChhhhccccccccCCCCCeeEEeCCC------------------
Q 016370 18 VTICMIGAGGFIGSHLCEKILLET--PHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI------------------ 77 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~------------------ 77 (390)
.||.|.| -|.-|.+++.+|.+.. +.+.++++.+...+.... ....+..+.-
T Consensus 16 ~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~--------~~~ki~ig~~~t~g~Gag~~p~~g~~aa 86 (209)
T d2vapa1 16 AKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK--------ADKKILIGKKLTRGLGAGGNPKIGEEAA 86 (209)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC--------CSEEEECCTTTTTTBCCTTCHHHHHHHH
T ss_pred CcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC--------cchhcccccccccccccccchHHHHHHH
Confidence 4799998 6778999999999871 244566666544443221 1222222211
Q ss_pred -CChhHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCc
Q 016370 78 -KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133 (390)
Q Consensus 78 -~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~ 133 (390)
.+.+.+.+.++++|.||-+||..+.. -..++.-+.+.+++.+..
T Consensus 87 ~e~~~~I~~~l~~~d~vfi~AGlGGGT------------Gsgaapvia~~ake~g~l 131 (209)
T d2vapa1 87 KESAEEIKAAIQDSDMVFITCGLGGGT------------GTGSAPVVAEISKKIGAL 131 (209)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhccCCCEEEEEEeCCCCc------------cccHHHHHHHHHHHcCCc
Confidence 14467888888999999999987642 233455678899999843
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=83.84 E-value=0.48 Score=39.22 Aligned_cols=31 Identities=19% Similarity=0.399 Sum_probs=28.8
Q ss_pred EEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 20 vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
|+|.| +|.+|..++.+|.++ |++|+++++..
T Consensus 6 vvIIG-aGi~Gls~A~~La~~-G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQ-GVKTLLVDAFD 36 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred EEEEC-cCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 88998 899999999999999 99999999864
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=83.13 E-value=0.5 Score=39.64 Aligned_cols=32 Identities=28% Similarity=0.553 Sum_probs=28.4
Q ss_pred EEEEEcCchhHHHHHHHHHHhhCCC-eEEEEecCC
Q 016370 19 TICMIGAGGFIGSHLCEKILLETPH-KILALDVYN 52 (390)
Q Consensus 19 ~vlItGatG~iG~~l~~~L~~~~g~-~V~~~~r~~ 52 (390)
+|+|.| +|.+|..++.+|.++ |+ +|.++++..
T Consensus 3 dViIIG-aGi~G~s~A~~La~~-G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIG-AGIVGTNLADELVTR-GWNNITVLDQGP 35 (305)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHT-TCCCEEEECSSC
T ss_pred CEEEEC-cCHHHHHHHHHHHHc-CCCcEEEEeCCC
Confidence 599999 789999999999998 75 799999864
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=82.63 E-value=0.55 Score=35.94 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=27.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~ 51 (390)
.++|+|.| +|++|-.++..|.+. |.+|.++.+.
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~-g~~v~v~~~~ 35 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRAS-GWEGNIRLVG 35 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHT-TCCSEEEEEC
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHc-CCceEEEEec
Confidence 46899988 899999999999998 8776655443
|
| >d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Formyl-CoA transferase species: Oxalobacter formigenes [TaxId: 847]
Probab=82.44 E-value=2.6 Score=37.09 Aligned_cols=116 Identities=16% Similarity=0.150 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC--hhhhcccccc-------ccCCCCCeeEEeCCCCChh--
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN--DKIKHLLEPE-------SQTGADRIQFHRLNIKHDS-- 81 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~--~~~~~~~~~~-------~~~~~~~i~~~~~D~~d~~-- 81 (390)
+++.+.|||=.+ ....|....+.|... |.+|+-+.+.. +......... ....-.+=+.+..|+.+++
T Consensus 2 ~PL~GirVld~~-~~~agp~~~~~Ladl-GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~ 79 (427)
T d2vjma1 2 KPLDGINVLDFT-HVQAGPACTQMMGFL-GANVIKIERRGSGDMTRGWLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGK 79 (427)
T ss_dssp CTTTTCEEEECC-CTTHHHHHHHHHHHT-TCEEEEEECTTTCSGGGGSSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHH
T ss_pred CCCCCCEEEEcC-ChhHHHHHHHHHHHh-CCeEEEECCCCCCCcccccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHH
Confidence 467888888666 344455555555555 99999998642 1111110000 0001234578899999765
Q ss_pred -HHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 82 -RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 82 -~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
.+.++++.+|+||+.-..........+ .+.+++.+.++||+|... ||..
T Consensus 80 ~~~~~Lv~~aDv~i~n~~pg~~~rlGL~---------------~~~l~~~NP~LI~~sisg-fG~~ 129 (427)
T d2vjma1 80 ELLEQMIKKADVMVENFGPGALDRMGFT---------------WEYIQELNPRVILASVKG-YAEG 129 (427)
T ss_dssp HHHHHHHHHCSEEEECCSTTHHHHTTCC---------------HHHHHHHCTTCEEEEEES-SCTT
T ss_pred HHHHHHHHhCCeeeECCCcchHHHcCCC---------------chhhhhhCCccceeeeec-cccc
Confidence 578888899999987543211111111 234556668999999643 5543
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.17 E-value=0.79 Score=38.66 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=30.5
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
..||+|.| +|.-|-..+..|.++ |++|.++...+
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~~~-G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQSF-GMDVTLLEARD 38 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 35799999 899999999999999 99999998754
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=82.08 E-value=1.3 Score=35.67 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=54.6
Q ss_pred CCCEEEEEc-CchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIG-AGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.+++||=.| |+|+...+|+.. . ++..|++++.++.....+..... ..+.+..+.+|..++.........+|+++
T Consensus 74 pG~~VLDlGcGsG~~~~~la~~-~--~~g~V~aVDiS~~~i~~a~~~a~--~~~ni~~i~~d~~~~~~~~~~~~~v~~i~ 148 (230)
T d1g8sa_ 74 RDSKILYLGASAGTTPSHVADI-A--DKGIVYAIEYAPRIMRELLDACA--ERENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHH-T--TTSEEEEEESCHHHHHHHHHHTT--TCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCEEEEeCEEcCHHHHHHHHh-C--CCCEEEEEeCcHHHHHHHHHHHh--hhcccceEEEeeccCcccccccceeEEee
Confidence 468999888 578888888875 3 24699999999877665543221 23578889999998887665554466666
Q ss_pred Eec
Q 016370 95 NLA 97 (390)
Q Consensus 95 h~a 97 (390)
+..
T Consensus 149 ~~~ 151 (230)
T d1g8sa_ 149 EDV 151 (230)
T ss_dssp ECC
T ss_pred ccc
Confidence 543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.95 E-value=1.2 Score=32.41 Aligned_cols=37 Identities=27% Similarity=0.402 Sum_probs=29.1
Q ss_pred CCEEEEEcCchhHHHHHHHHHHh---hCCCeEEEEecCChh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILL---ETPHKILALDVYNDK 54 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~---~~g~~V~~~~r~~~~ 54 (390)
.++|+|.| +|++|-.++..|.+ ..|.+|+.+.+.+..
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~ 76 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGN 76 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence 46899998 69999999988853 128999999886643
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=81.78 E-value=1.1 Score=37.82 Aligned_cols=33 Identities=9% Similarity=0.254 Sum_probs=23.3
Q ss_pred CEEEEEcC-c-hhH--HHHHHHHHHhhCCCeEEEEecC
Q 016370 18 VTICMIGA-G-GFI--GSHLCEKILLETPHKILALDVY 51 (390)
Q Consensus 18 ~~vlItGa-t-G~i--G~~l~~~L~~~~g~~V~~~~r~ 51 (390)
|||||++| | |-+ +.+|+++|.++ ||+|..+...
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~-G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT-TCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhC-CCEEEEEEeC
Confidence 57777764 4 333 33588999888 9999887654
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=81.51 E-value=0.76 Score=39.72 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=59.0
Q ss_pred EEEcCchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChh-HHHHhhccccEEEEeccc
Q 016370 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS-RLEGLIKMADLTINLAAI 99 (390)
Q Consensus 21 lItGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~-~~~~~~~~~d~Vih~a~~ 99 (390)
=+.+|+|.+|-.|+ ++ +.+|+++...++.......-.......+++++.+|..+.- ........+|+||
T Consensus 218 DLycG~G~fsl~La----~~-~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vi----- 287 (358)
T d1uwva2 218 DLFCGMGNFTLPLA----TQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL----- 287 (358)
T ss_dssp EESCTTTTTHHHHH----TT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE-----
T ss_pred Eecccccccchhcc----cc-ccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEE-----
Confidence 36889999998875 34 6899999988766554332222223467899999887532 2222223478876
Q ss_pred cCCccccCChhHHHHHhhhhHHHHHHHHHhCC-CcEEEeec
Q 016370 100 CTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFST 139 (390)
Q Consensus 100 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~v~~Ss 139 (390)
.+|++... ..+++...+.+ +++||+|.
T Consensus 288 lDPPR~G~-------------~~~~~~l~~~~~~~ivYVSC 315 (358)
T d1uwva2 288 LDPARAGA-------------AGVMQQIIKLEPIRIVYVSC 315 (358)
T ss_dssp ECCCTTCC-------------HHHHHHHHHHCCSEEEEEES
T ss_pred eCCCCccH-------------HHHHHHHHHcCCCEEEEEeC
Confidence 23443322 22344444445 89999997
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=81.35 E-value=0.93 Score=36.61 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=30.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
..+++++|+|-| .|.+|+++++.|.++.|..|++++-
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence 356789999987 9999999999997533899887764
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.01 E-value=1.7 Score=34.07 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCCEEEEEcCchhHHHH-HHHHH---Hhh----CCCeEEEEecCChhhhcccc-------ccc------cCCCCCeeEEe
Q 016370 16 KPVTICMIGAGGFIGSH-LCEKI---LLE----TPHKILALDVYNDKIKHLLE-------PES------QTGADRIQFHR 74 (390)
Q Consensus 16 ~~~~vlItGatG~iG~~-l~~~L---~~~----~g~~V~~~~r~~~~~~~~~~-------~~~------~~~~~~i~~~~ 74 (390)
.+..++|+||||=+... |...| ... .+..|+++.|++-....+.+ ... .....++.++.
T Consensus 19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~ 98 (203)
T d1qkia1 19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA 98 (203)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence 44579999999998865 33333 222 14679999997632211100 000 01236789999
Q ss_pred CCCCChhHHHHhhc---------cccEEEEecc
Q 016370 75 LNIKHDSRLEGLIK---------MADLTINLAA 98 (390)
Q Consensus 75 ~D~~d~~~~~~~~~---------~~d~Vih~a~ 98 (390)
+|+.+.+.+..+-. ....||++|-
T Consensus 99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv 131 (203)
T d1qkia1 99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLAL 131 (203)
T ss_dssp CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred CcCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence 99999887765422 1457888885
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=80.90 E-value=1.2 Score=35.41 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN 52 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 52 (390)
..+++|+|+|.| +|.-|-.++..|.+. +.+++.+.|++
T Consensus 28 ~~~~gK~V~VvG-~G~Sa~dia~~~~~~-~~~~~~~~~~~ 65 (235)
T d1w4xa2 28 VDFSGQRVGVIG-TGSSGIQVSPQIAKQ-AAELFVFQRTP 65 (235)
T ss_dssp CCCBTCEEEEEC-CSHHHHHHHHHHHHH-BSEEEEEESSC
T ss_pred CCCCCCEEEEEC-CCccHHHHHHHHHhh-hcccccccccc
Confidence 467899999998 888999999999998 88888887765
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=80.87 E-value=6.5 Score=34.21 Aligned_cols=116 Identities=17% Similarity=0.127 Sum_probs=65.5
Q ss_pred CCCCCCEEEEEcCchhHHHHHHHHHHhhCCCeEEEEecCC--hhhhccccc-------cccCCCCCeeEEeCCCCCh---
Q 016370 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN--DKIKHLLEP-------ESQTGADRIQFHRLNIKHD--- 80 (390)
Q Consensus 13 ~~~~~~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r~~--~~~~~~~~~-------~~~~~~~~i~~~~~D~~d~--- 80 (390)
+++.+.|||=.+ +...|....+.|... |.+|+-+.+.. +........ .....-.+=+.+..|+.++
T Consensus 3 ~PL~GirVld~~-~~~agp~~~~~Lad~-GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~ 80 (417)
T d1q7ea_ 3 TPLQGIKVLDFT-GVQSGPSCTQMLAWF-GADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGK 80 (417)
T ss_dssp CTTTTCEEEECC-CTTHHHHHHHHHHHT-TCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHH
T ss_pred CCCCCCEEEEcC-ChhHHHHHHHHHHHh-CCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHH
Confidence 467888888655 344455555555555 99999998642 211111100 0000123457889999975
Q ss_pred hHHHHhhccccEEEEeccccCCccccCChhHHHHHhhhhHHHHHHHHHhCCCcEEEeecccccccc
Q 016370 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKT 146 (390)
Q Consensus 81 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~ 146 (390)
+.+.++++++|+||+.--.........++ +..++.+.++||+|-.. ||..
T Consensus 81 ~~~~~Li~~aDv~i~n~~pg~~~rlGl~~---------------~~l~~~nP~lI~~sisg-fG~~ 130 (417)
T d1q7ea_ 81 EVMEKLIREADILVENFHPGAIDHMGFTW---------------EHIQEINPRLIFGSIKG-FDEC 130 (417)
T ss_dssp HHHHHHHHHCSEEEECCCC-------CCH---------------HHHHHHCTTCEEEEEES-SCTT
T ss_pred HHHHHHHhcCcccEeccCCCcHhhcCCCH---------------HHHHhhCCCEEEEeeec-cccc
Confidence 45668888999999986543222222222 23445557999999643 5543
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=80.55 E-value=1.4 Score=35.41 Aligned_cols=78 Identities=14% Similarity=0.174 Sum_probs=58.0
Q ss_pred CCCEEEEEc-CchhHHHHHHHHHHhhCCCeEEEEecCChhhhccccccccCCCCCeeEEeCCCCChhHHHHhhccccEEE
Q 016370 16 KPVTICMIG-AGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTI 94 (390)
Q Consensus 16 ~~~~vlItG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~i~~~~~D~~d~~~~~~~~~~~d~Vi 94 (390)
.+++||=.| |+|+.-.+|++..-. ...|++++.++.....+..... ....+..+..|..+.+.+......+|+|+
T Consensus 73 pG~~VLDlGaGsG~~t~~la~~VG~--~G~V~aVD~s~~~l~~a~~~a~--~~~~~~~i~~d~~~~~~~~~~~~~vD~i~ 148 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVSDIVGW--EGKIFGIEFSPRVLRELVPIVE--ERRNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHS--SCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHHhCC--CCEEEEEeCcHHHHHHHHHHHH--hcCCceEEEEECCCcccccccccceEEEE
Confidence 568898777 578888888886543 4799999999877665543211 13568889999999888777767789988
Q ss_pred Eec
Q 016370 95 NLA 97 (390)
Q Consensus 95 h~a 97 (390)
+-.
T Consensus 149 ~d~ 151 (227)
T d1g8aa_ 149 EDV 151 (227)
T ss_dssp ECC
T ss_pred EEc
Confidence 754
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=80.52 E-value=1.2 Score=29.94 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=25.7
Q ss_pred CEEEEEcCchhHHHHHHHHHHhhCCCeEEEEec
Q 016370 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDV 50 (390)
Q Consensus 18 ~~vlItGatG~iG~~l~~~L~~~~g~~V~~~~r 50 (390)
|||||.| +|-=-++|+..|.+. ..+++++--
T Consensus 1 MkVLviG-sGgREHAia~~l~~s-~~~v~~~pG 31 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQ-GYEVHFYPG 31 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcC-CCeEEEecC
Confidence 7999999 666788999999887 788988743
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=80.41 E-value=1 Score=31.70 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=29.0
Q ss_pred CCEEEEEcCchhHHHHHHHHHHhh--CCCeEEEEecCCh
Q 016370 17 PVTICMIGAGGFIGSHLCEKILLE--TPHKILALDVYND 53 (390)
Q Consensus 17 ~~~vlItGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~ 53 (390)
+++++|.| .|++|-.++..|.+. .|.+|.++.|.+.
T Consensus 18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence 47999999 899999999766542 2789999998764
|