Citrus Sinensis ID: 016372

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Protein Sequence
MDHSLSLHGPAKTLPFLPPSKPRGPRSLPPSNSNFGRRRLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccHHHHHHHHHHHHccHHHHHHcccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEcccccHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcc
Coil and Loop (DISEMBL)
mdhslslhgpaktlpflppskprgprslppsnsnfgrrrlLRSGVVvqaragpspcefsssplntplepnspagKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMslssgsdegplHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLsrciyngrleiwpskdwelesiHEFEVLEMIREHISTVIGLrancsvtdswaTTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHlthrnslqfpeawsyglkqnqvvgcvnntqsislgrgtnghelkqenlkcyvmgfdpeTLQRCAKLRSREAVNLVEkhscalfgdgqtglldtdeVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Flexible Loop (DISEMBL)
mdhslslhgpaktlpflppskprgprslppsnsnfgrrrLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARmslssgsdegpLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGrleiwpskdweLESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Low Complexity Region (SEG)
MDHSLSLHGPAKTLPFLPPSKPRGPRSLPPSNSNFGrrrllrSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Disordered region (IsUnstruct)
****************************************************************************LSRVLQNQRQYFNLAVSDELKLLA************************IAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYK****
Disordered Region (DISOPRED)
*********PA***PF*****************************************************NSPAGKFLSRVLQNQRQYFNLAVSDELKLL************************RIAQ***HECQTAVEDVMYMLILYKFSEIRVQLVPKL********************SIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEEC********************************************************LKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLK**
Disordered Region (DISEMBL)
MDHSLSLHGPAKTLPFLPPSKPRGPRSLPPSNSNFGRRRLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARM**********LHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Disordered Region (DISPRO)
************TL************************************************LNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAV*******GSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH**********************************************LKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDHSLSLHGPAKTLPFLPPSKPRGPRSLPPSNSNFGRRRLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	390
255580495	408	conserved hypothetical protein [Ricinus	0.987	0.943	0.656	1e-139
356558985	388	PREDICTED: uncharacterized protein LOC10	0.858	0.863	0.659	1e-122
449464112	388	PREDICTED: uncharacterized protein LOC10	0.971	0.976	0.593	1e-120
356504408	393	PREDICTED: uncharacterized protein LOC10	0.876	0.870	0.637	1e-119
225467702	380	PREDICTED: uncharacterized protein LOC10	0.830	0.852	0.658	1e-119
357513325	372	hypothetical protein MTR_8g012420 [Medic	0.871	0.913	0.615	1e-114
224069880	275	predicted protein [Populus trichocarpa]	0.684	0.970	0.754	1e-113
297833518	371	hypothetical protein ARALYDRAFT_896892 [	0.830	0.873	0.602	1e-111
356566244	353	PREDICTED: uncharacterized protein LOC10	0.861	0.951	0.555	1e-109
18397912	368	uncharacterized protein [Arabidopsis tha	0.905	0.959	0.567	1e-108

>gi|255580495|ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis] gi|223529318|gb|EEF31286.1| conserved hypothetical protein [Ricinus communis]

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/413 (65%), Positives = 319/413 (77%), Gaps = 28/413 (6%)

Query: 1   MDHSLSLHGPAKTLP---FLPPS-KPRGPRSLPPSNS--NFG------------RRRLLR 42
           MD+SLS    ++T+P   FLP S K     S+ P N   NF             RR++LR
Sbjct: 1   MDYSLS----SQTIPCPHFLPSSVKSISLPSILPYNFTLNFSCRRQTNQTTFLHRRKVLR 56

Query: 43  SGVVVQARAGPSPCEFSSSP-----LNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELK 97
           + + V ARAG S CE SSS      LNTPLEP+S AGKFLS V QNQRQ F++AV+DELK
Sbjct: 57  APLSVVARAGSSHCEPSSSSSSSFSLNTPLEPSSAAGKFLSSVFQNQRQLFHVAVADELK 116

Query: 98  LLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLV 157
           LLA+ RD AV+RM LSS SDE  LHRRIAQLKEHECQ AVEDVMYMLI  KFSEIRV LV
Sbjct: 117 LLADARDDAVSRMFLSSRSDEASLHRRIAQLKEHECQIAVEDVMYMLIFSKFSEIRVPLV 176

Query: 158 PKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQ 217
           PKLSRCIYNGRLEI PSKDWELESIH FEVLEMI+EH+ TVIGLRAN SVTDSWATTEIQ
Sbjct: 177 PKLSRCIYNGRLEIGPSKDWELESIHSFEVLEMIKEHVCTVIGLRANSSVTDSWATTEIQ 236

Query: 218 RLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQ 277
           RL+LGRVY AS+LYGYFLKSASLR+YLE+C+A +H ++HL+ R   Q+PE+ S+GL  N 
Sbjct: 237 RLQLGRVYAASVLYGYFLKSASLRHYLEQCIAVSHHNVHLSCRTVRQYPESISHGLT-NI 295

Query: 278 VVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCA 337
           V   ++N QS S G+G+   + ++  L+CYVMGFD ETLQRCAKL+S+EA+NL+EKHS A
Sbjct: 296 VFRRISNMQSGSAGQGSIKQDWQRGKLRCYVMGFDAETLQRCAKLKSKEAMNLIEKHSSA 355

Query: 338 LFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           LFG+  TG L+ DEVILTSFSSLKRLVLEA+AFGSFLWD EEY ++++KL EN
Sbjct: 356 LFGNDNTGSLENDEVILTSFSSLKRLVLEAVAFGSFLWDTEEYVNSIFKLSEN 408

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558985|ref|XP_003547782.1| PREDICTED: uncharacterized protein LOC100804253 [Glycine max]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/344 (65%), Positives = 272/344 (79%), Gaps = 9/344 (2%)

Query: 47  VQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAA 106
           ++A AG SPCEFSS  LN+PLEP S  GKFLS VLQN  Q F++AV +ELKLLA DRDAA
Sbjct: 54  IRASAGASPCEFSS--LNSPLEPRSMVGKFLSAVLQNHPQMFHVAVGEELKLLAEDRDAA 111

Query: 107 VARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYN 166
            ARM L S SDE  LHRRIAQ+KE++CQ AVEDVMY+LI YKFSEIRV +VPKLS C+YN
Sbjct: 112 HARMVLGSASDEALLHRRIAQVKENQCQIAVEDVMYLLIFYKFSEIRVPMVPKLSSCLYN 171

Query: 167 GRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYV 226
           GRLEI PSKDWELESIH  EVL+MIREHI+TV GLRA  SVT+ WATT++++  L RVYV
Sbjct: 172 GRLEILPSKDWELESIHSSEVLDMIREHITTVTGLRAKSSVTECWATTQVRQFLLARVYV 231

Query: 227 ASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQ 286
           ASILYGYFLKS SLRY+LE  L+ A+ DLHL HR S+ F    SYG K + + G ++N  
Sbjct: 232 ASILYGYFLKSVSLRYHLERNLSLANHDLHLGHRTSVMF----SYGFK-DAIFGHLSNMP 286

Query: 287 SISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGL 346
             SLG+G    E + E+LKCYVM F P +LQRCA+LRS+EAVNLV  +SCALF + ++G 
Sbjct: 287 --SLGQGLIRPEEEIEDLKCYVMSFHPGSLQRCARLRSKEAVNLVGSYSCALFNNKESGS 344

Query: 347 LDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           ++ D+VILTSFSSLKRLVLEA+AFGSFLW+ E+Y D VYKLK++
Sbjct: 345 VENDDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKDD 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464112|ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/399 (59%), Positives = 286/399 (71%), Gaps = 20/399 (5%)

Query: 1   MDHSLSLHGPAKTLPFLPPSKPRGPRSLPPSNSNFGRRRLLR--SGVVVQARAGPSPCEF 58
           MDH LSLH   K+ P +            P  S+F +  L    S  +V A  G S CEF
Sbjct: 1   MDHCLSLH---KSFPLISLPSSSSSPKFKPYLSSFRKLPLTSRSSSFLVLASTGASHCEF 57

Query: 59  SSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDE 118
            S  LNTPL+P S  GK LSRVLQN R  F+++V DELKLLA+ RDAA+ RM +S+ SDE
Sbjct: 58  GS--LNTPLDPKSSVGKHLSRVLQNYRHLFHVSVEDELKLLADHRDAALHRMLISAHSDE 115

Query: 119 GPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWE 178
             LHRRIAQLKEHECQ AV+DVMYMLI Y+FSEIRV LVPKLSRC+YNGRLEI P KDWE
Sbjct: 116 ALLHRRIAQLKEHECQIAVQDVMYMLIFYRFSEIRVNLVPKLSRCVYNGRLEILPCKDWE 175

Query: 179 LESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSA 238
           LESI+E EVL MI+EHI+TVIGLRA+ SVTD+WA T I++  LGRVYVASILYGYFLKSA
Sbjct: 176 LESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAHLGRVYVASILYGYFLKSA 235

Query: 239 SLRYYLEECLASAHQDLHLTHRNS------LQFPEAWSYGLKQNQVVGCVNNTQSISLGR 292
            LR++LE+ LA  +     THRN       LQFPE   YG + N + G ++N  S+   +
Sbjct: 236 ILRHHLEQKLAIPN-----THRNGGHPKTFLQFPEMCLYGFR-NLLSGRLSNMLSVPHNQ 289

Query: 293 G-TNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDE 351
             ++  E + E LK ++ GFD E LQRCAKL+S+EA+NL+E HS AL G+ + G  + +E
Sbjct: 290 VLSSSQETEPEKLKRFLTGFDSEALQRCAKLKSKEALNLIENHSYALLGNEEVGFFENNE 349

Query: 352 VILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           VI+TSFSSLKRLVLEA+AFGSFLWDAEEY D +YKLKEN
Sbjct: 350 VIVTSFSSLKRLVLEAVAFGSFLWDAEEYVDTIYKLKEN 388

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504408|ref|XP_003520988.1| PREDICTED: uncharacterized protein LOC100793365 [Glycine max]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/356 (63%), Positives = 271/356 (76%), Gaps = 14/356 (3%)

Query: 35  FGRRRLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSD 94
           F RRR       ++A AG SPCEFSS  LN+PLEP S  GKFL  VLQN  Q F+LAV +
Sbjct: 52  FHRRRPF-----IRASAGASPCEFSS--LNSPLEPRSMVGKFLIGVLQNHPQMFHLAVGE 104

Query: 95  ELKLLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRV 154
           ELKLLA DRDAA ARM L S SDE  LHRRIA +KE++CQ AVEDV+Y+LI YKFSEIRV
Sbjct: 105 ELKLLAEDRDAAHARMVLGSASDEALLHRRIALVKENQCQIAVEDVIYLLIFYKFSEIRV 164

Query: 155 QLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATT 214
            +VPKLS C+YNGRLEI PSKDWELESIH  EVL+MIREHI+TV GLRA  SVT+ WATT
Sbjct: 165 PMVPKLSSCLYNGRLEILPSKDWELESIHSLEVLDMIREHITTVTGLRAKSSVTECWATT 224

Query: 215 EIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLK 274
            +++  L RVYVASILYGYFLKS SLRY+LE  L+ A+ DLHL H+ SL      SYG K
Sbjct: 225 HVRQFLLARVYVASILYGYFLKSVSLRYHLERNLSLANHDLHLGHKTSLM----CSYGFK 280

Query: 275 QNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKH 334
            + + G ++N    SLG+G    E + E+LKCYVM F P +LQRCA+LRS+EAVNLV  +
Sbjct: 281 -DAIFGHLSNMS--SLGQGLIRPEEELEDLKCYVMSFHPGSLQRCARLRSKEAVNLVGSY 337

Query: 335 SCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           SCALF + ++G ++ D+VILTSFSSLKRLVLEA+AFGSFLW+ E+Y D VY LK++
Sbjct: 338 SCALFNNEESGSVENDDVILTSFSSLKRLVLEAVAFGSFLWEIEDYIDNVYNLKDD 393

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225467702|ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis vinifera]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/334 (65%), Positives = 270/334 (80%), Gaps = 10/334 (2%)

Query: 61  SPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDEGP 120
           S LNTPLEP S  GKFLS VLQNQRQ F++AV+++L+ LA+DRDAA+ARM+LS GS    
Sbjct: 53  SSLNTPLEPRSLPGKFLSGVLQNQRQLFHVAVAEQLRDLADDRDAALARMNLSYGSSSSS 112

Query: 121 ---LHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDW 177
              LHRRIA+LKE ECQ AVEDVMY+LI YKFSEIRV LVP+LSRCIYNGRLEIWP++DW
Sbjct: 113 ESCLHRRIAELKERECQIAVEDVMYLLIFYKFSEIRVHLVPRLSRCIYNGRLEIWPARDW 172

Query: 178 ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 237
            LE IH FEVLEMI+EH++TV+G +   +VT++WATT+I+R +LG++Y ASILYGYFLKS
Sbjct: 173 ALECIHNFEVLEMIKEHLTTVLGWKPKSNVTENWATTQIRRFQLGQIYAASILYGYFLKS 232

Query: 238 ASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGH 297
           ASLR++LE  L  +H DL  ++ +       WSYGLK +  +G   ++Q  SLG  ++  
Sbjct: 233 ASLRHHLEMSLVHSHHDLPSSNVSGF-----WSYGLK-DLFLGPNCSSQPTSLGEASSRQ 286

Query: 298 ELKQE-NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTS 356
           E K+E  L+CYVMGFDP+TLQRCAKL+S+EAVNLVEKHSCALFGD +TGLL+TD+VI TS
Sbjct: 287 EEKEEKKLRCYVMGFDPDTLQRCAKLKSKEAVNLVEKHSCALFGDEKTGLLETDDVISTS 346

Query: 357 FSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           FSS+KRLVLEA+AFGSFLWD EEY  +VY LKEN
Sbjct: 347 FSSMKRLVLEAVAFGSFLWDTEEYVGSVYNLKEN 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513325|ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula] gi|355520973|gb|AET01427.1| hypothetical protein MTR_8g012420 [Medicago truncatula]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/346 (61%), Positives = 267/346 (77%), Gaps = 6/346 (1%)

Query: 46  VVQARAGPSP-CEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRD 104
           +++A AG S  CE  SS LNTPL P +  GKFLS VLQN R  F++AV +ELKLLA+DRD
Sbjct: 32  LIKASAGASSHCE--SSSLNTPLLPRTQVGKFLSGVLQNHRNLFHVAVQEELKLLADDRD 89

Query: 105 AAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCI 164
           AA +RM L+S SDE  LHRRIA++KE++C+ AVED+M +LI +KFSEIR  LVPKLSRC+
Sbjct: 90  AANSRMLLASESDEALLHRRIAEMKENQCEVAVEDIMSLLIFHKFSEIRAPLVPKLSRCL 149

Query: 165 YNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRV 224
           YNGRLEI PSKDWELESIH  EVL+MIREH++TV GL+A  SVT+SWATT++++  LGR+
Sbjct: 150 YNGRLEILPSKDWELESIHTLEVLDMIREHVTTVTGLKAKPSVTESWATTKVRQFLLGRI 209

Query: 225 YVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNN 284
           YVASILYGYFLKS SLRY+LE  L  A+ D+H  HR +L F +   YG  ++ + G ++N
Sbjct: 210 YVASILYGYFLKSVSLRYHLERNLNLANHDVHPGHRTNLSFKDMCPYGF-EDDIFGHLSN 268

Query: 285 TQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT 344
            + I  G+G    E + E+LKCYVM F P +LQRCAKLRS+EAVNLV  +S ALF     
Sbjct: 269 MKPI--GQGLIRQEEEIEDLKCYVMRFHPGSLQRCAKLRSKEAVNLVRSYSSALFNSEGF 326

Query: 345 GLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
             +D+D+VILTSFSSLKRLVLEA+AFGSFLW+ E+Y D VYKLK++
Sbjct: 327 DSVDSDDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKDH 372

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069880|ref|XP_002303068.1| predicted protein [Populus trichocarpa] gi|222844794|gb|EEE82341.1| predicted protein [Populus trichocarpa]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/269 (75%), Positives = 231/269 (85%), Gaps = 2/269 (0%)

Query: 123 RRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESI 182
           +RIA+LKEHECQ AVEDVMYML+LYKFSEIRV LVPKLSRCIYNGRLEI PSKDWELESI
Sbjct: 8   QRIAELKEHECQVAVEDVMYMLVLYKFSEIRVPLVPKLSRCIYNGRLEIRPSKDWELESI 67

Query: 183 HEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRY 242
           H FEVLEM+REH+STVIGL+AN SV DSWATTE+QR RLGRVY ASILYGYFLKSASLR+
Sbjct: 68  HSFEVLEMVREHVSTVIGLKANSSVADSWATTEVQRCRLGRVYAASILYGYFLKSASLRH 127

Query: 243 YLEECLASAHQDLHLTHRNSLQFPEAW-SYGLKQNQVVGCVNNTQSISLGRGTNGHELKQ 301
           +LE CL   HQD+HL HR++LQFPE+  SYGL  N V G ++N QS S G   N  + + 
Sbjct: 128 HLEWCLVLPHQDIHLGHRSTLQFPESLPSYGL-TNLVFGHISNKQSTSQGTRLNRPKSEH 186

Query: 302 ENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLK 361
           E LKCY+MGFD ETLQRCAKL+S+EAVNL+EKHSCALFGD +TG+L+ DEVILTSFSSLK
Sbjct: 187 EKLKCYMMGFDSETLQRCAKLKSKEAVNLIEKHSCALFGDEKTGVLENDEVILTSFSSLK 246

Query: 362 RLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           RLVLEA+AFG FLWD EE  ++VYKLK+N
Sbjct: 247 RLVLEAVAFGCFLWDTEEDVNSVYKLKDN 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833518|ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/355 (60%), Positives = 257/355 (72%), Gaps = 31/355 (8%)

Query: 36  GRRRLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDE 95
            +R++  S +VV A AGPS CE  SS LN PLEP S  G+FL  VL N+RQ F+ A +DE
Sbjct: 35  AKRKIQYSSMVVVAAAGPSRCEPGSS-LNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADE 93

Query: 96  LKLLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQ 155
           LK LA+DR+AA+ARMSLSSGSDE  LHRRIAQLKE  C+TAV+D+MYMLI YK+SEIRV 
Sbjct: 94  LKQLADDREAALARMSLSSGSDEASLHRRIAQLKERYCKTAVQDIMYMLIFYKYSEIRVP 153

Query: 156 LVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTE 215
           LVPKLSRCIYNGRLEIWPSKDWELESIH  + LE+I+EH+S VIGLR N  VTD+WATT+
Sbjct: 154 LVPKLSRCIYNGRLEIWPSKDWELESIHSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQ 213

Query: 216 IQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQ 275
           IQ+L L +VY ASILYGYFLKSASLR+ LE  L+    DLH +             G  +
Sbjct: 214 IQKLHLRKVYAASILYGYFLKSASLRHQLECSLS----DLHGS-------------GYLK 256

Query: 276 NQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHS 335
           + ++GC   T +  +          ++ L+ Y+ GFDPETLQRCAK R+ EA NL+EK S
Sbjct: 257 SPILGCSFTTSTAQIS--------SKQQLRHYISGFDPETLQRCAKPRTEEARNLIEKQS 308

Query: 336 CALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
            ALFG       ++DE I+TSFSSLKRLVLEA+AFG+FLWD E Y D  YKLKEN
Sbjct: 309 LALFGTE-----ESDETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKEN 358

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566244|ref|XP_003551344.1| PREDICTED: uncharacterized protein LOC100794032 [Glycine max]

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/378 (55%), Positives = 261/378 (69%), Gaps = 42/378 (11%)

Query: 13  TLPFLPPSKPRGPRSLPPSNSNFGRRRLLRSGVVVQARAGPSPCEFSSSPLNTPLEPNSP 72
           TLP  PPS P  P+ +                  V+A AG   CEFSS   N PLEP S 
Sbjct: 15  TLP-QPPSTPLFPKVMR-----------------VRASAGRRHCEFSSQ--NAPLEPRSL 54

Query: 73  AGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDEGPLHRRIAQLKEHE 132
            GKFLS VLQN+RQ F++   +ELK+L++DRD+A+ARM LS  SDE  LHRRIAQ+KE+E
Sbjct: 55  VGKFLSGVLQNRRQLFHVVAKEELKMLSDDRDSALARMHLSQHSDEALLHRRIAQVKENE 114

Query: 133 CQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIR 192
              A+ DVMY+LILYKFSEIRV LVPKLS C+Y+GRLEI PSKDW+LESIH  EVL++IR
Sbjct: 115 SMIAIADVMYLLILYKFSEIRVNLVPKLSSCLYDGRLEILPSKDWDLESIHSLEVLDIIR 174

Query: 193 EHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLASAH 252
           +H+STV GLR+N SV +SW TT I+++ L RVYVASILYGYFLKS SLRY LE  L+ + 
Sbjct: 175 KHVSTVTGLRSNPSVRESWETTPIRQVWLARVYVASILYGYFLKSVSLRYNLERSLSLSD 234

Query: 253 QDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGHELKQENLKCYVMGFD 312
            D H  H+    F + +  G K  + +                      E+LKCYV GF 
Sbjct: 235 HDFHHGHKIGPSFHDMYHSGAKDEEEI----------------------EDLKCYVTGFH 272

Query: 313 PETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGS 372
           P + +RCAKLRS+EAV+LVE HS ALFGDG++GL   D++I+TSFSSL+RLVLEA+AFGS
Sbjct: 273 PGSFERCAKLRSKEAVHLVESHSNALFGDGKSGLSQHDDIIVTSFSSLRRLVLEAVAFGS 332

Query: 373 FLWDAEEYADAVYKLKEN 390
           FLW+ E+Y D+VYKLK+ 
Sbjct: 333 FLWETEDYIDSVYKLKDQ 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397912|ref|NP_566302.1| uncharacterized protein [Arabidopsis thaliana] gi|6041833|gb|AAF02142.1|AC009853_2 unknown protein [Arabidopsis thaliana] gi|6642634|gb|AAF20215.1|AC012395_2 unknown protein [Arabidopsis thaliana] gi|14596187|gb|AAK68821.1| Unknown protein [Arabidopsis thaliana] gi|21593217|gb|AAM65166.1| unknown [Arabidopsis thaliana] gi|22136074|gb|AAM91115.1| unknown protein [Arabidopsis thaliana] gi|332641006|gb|AEE74527.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/393 (56%), Positives = 264/393 (67%), Gaps = 40/393 (10%)

Query: 1   MDHSLSLHGPAKTLPFLPPSKPRGPRSLPPSNSNF---GRRRLLRSGVVVQARAGPSPCE 57
           MD  LS       L FLP    R  R        F    +R++  S +VV A AG S CE
Sbjct: 1   MDSCLS---NQTALQFLPS---RSRRQSGDGGGGFVIPAKRKIQYSSMVVVAAAGQSRCE 54

Query: 58  FSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSD 117
             SS LN PLEP S  G+FL  VL N+RQ F+ A +DELK LA+DR+AA+ARMSLSSGSD
Sbjct: 55  PGSS-LNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADDREAALARMSLSSGSD 113

Query: 118 EGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDW 177
           E  LHRRIA+LKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSRCIYNGRLEIWPSKDW
Sbjct: 114 EASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIYNGRLEIWPSKDW 173

Query: 178 ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 237
           ELESI+  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L +VY ASILYGYFLKS
Sbjct: 174 ELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLRKVYAASILYGYFLKS 233

Query: 238 ASLRYYLEECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISLGRGTNGH 297
           ASLR+ LE  L+  H   +L                 ++ + GC       S   GT   
Sbjct: 234 ASLRHQLECSLSDIHGSGYL-----------------KSPIFGC-------SFTTGTAQI 269

Query: 298 ELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSF 357
             KQ+ L+ Y+  FDPETLQRCAK R+ EA NL+EK S ALFG       ++DE I+TSF
Sbjct: 270 SNKQQ-LRHYISDFDPETLQRCAKPRTEEARNLIEKQSLALFGTE-----ESDETIVTSF 323

Query: 358 SSLKRLVLEAIAFGSFLWDAEEYADAVYKLKEN 390
           SSLKRLVLEA+AFG+FLWD E Y D  YKLKEN
Sbjct: 324 SSLKRLVLEAVAFGTFLWDTELYVDGAYKLKEN 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	390
TAIR|locus:2079626	368	AT3G07310 "AT3G07310" [Arabido	0.535	0.567	0.695	9.6e-101
TAIR|locus:2152516	344	AT5G48590 "AT5G48590" [Arabido	0.605	0.686	0.583	1.7e-90
TAIR|locus:2088490	427	AT3G17800 "AT3G17800" [Arabido	0.848	0.775	0.390	5.5e-54
TAIR|locus:2198055	423	AT1G48450 "AT1G48450" [Arabido	0.8	0.737	0.403	1.7e-52
TAIR|locus:2031760	406	AT1G32160 "AT1G32160" [Arabido	0.912	0.876	0.314	8.4e-42

TAIR|locus:2079626 AT3G07310 "AT3G07310" [Arabidopsis thaliana (taxid:3702)]

 Score = 732 (262.7 bits), Expect = 9.6e-101, Sum P(2) = 9.6e-101
 Identities = 146/210 (69%), Positives = 170/210 (80%)

Query:    43 SGVVVQARAGPSPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLAND 102
             S +VV A AG S CE  SS LN PLEP S  G+FL  VL N+RQ F+ A +DELK LA+D
Sbjct:    40 SSMVVVAAAGQSRCEPGSS-LNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADD 98

Query:   103 RDAAVARMSLSSGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSR 162
             R+AA+ARMSLSSGSDE  LHRRIA+LKE  C+TAV+D+MYMLI YK+SEIRV LVPKLSR
Sbjct:    99 REAALARMSLSSGSDEASLHRRIAELKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSR 158

Query:   163 CIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLG 222
             CIYNGRLEIWPSKDWELESI+  + LE+I+EH+S VIGLR N  VTD+WATT+IQ+L L 
Sbjct:   159 CIYNGRLEIWPSKDWELESIYSCDTLEIIKEHVSAVIGLRVNSCVTDNWATTQIQKLHLR 218

Query:   223 RVYVASILYGYFLKSASLRYYLEECLASAH 252
             +VY ASILYGYFLKSASLR+ LE  L+  H
Sbjct:   219 KVYAASILYGYFLKSASLRHQLECSLSDIH 248

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2152516 AT5G48590 "AT5G48590" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
 Identities = 151/259 (58%), Positives = 178/259 (68%)

Query:     1 MDHSLSLHGPAKTLPFLPPSKPR-------GPRSLPPSNSNFGXXXXXXSGVVVQARAGP 53
             MD SLS HG   +LPF PPS+         G     PS   F       S VVV A +  
Sbjct:     1 MDTSLSHHG---SLPF-PPSRRNFVKQNRGGDCVFLPSRRKF----RYDSLVVVSAAS-- 50

Query:    54 SPCEFSSSPLNTPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLS 113
                  S   ++ PL P SP G+FLS VL  +RQ F+ AV+D LK LA+D++A+++RM LS
Sbjct:    51 -----SGQSIDAPLVPRSPQGRFLSSVLVKKRQLFHFAVADLLKQLADDKEASLSRMFLS 105

Query:   114 SGSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWP 173
              GSDE  LHRRIAQLKE +CQ A+ED+MYMLILYKFSEIRV LVPKL  CIYNGRLEI P
Sbjct:   106 YGSDEASLHRRIAQLKESDCQIAIEDIMYMLILYKFSEIRVPLVPKLPSCIYNGRLEISP 165

Query:   174 SKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGY 233
             SKDWELESIH F+VLE+I+EH + VI LR N S+TD  ATTEI + RL +VY AS+LYGY
Sbjct:   166 SKDWELESIHSFDVLELIKEHSNAVISLRVNSSLTDDCATTEIDKNRLSKVYTASVLYGY 225

Query:   234 FLKSASLRYYLEECLASAH 252
             FLKSASLR+ LE C  S H
Sbjct:   226 FLKSASLRHQLE-CSLSQH 243

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

TAIR|locus:2088490 AT3G17800 "AT3G17800" [Arabidopsis thaliana (taxid:3702)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 138/353 (39%), Positives = 200/353 (56%)

Query:    46 VVQARAGPSPCEFSSSPLN-TPLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRD 104
             VV+A +  +     SSP    PL+  SPAG+FLS++L +       AV  +L+ L  DRD
Sbjct:    79 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 138

Query:   105 AAVARMSLSS--GSDEGPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSR 162
             +       +S  G+D   L+RRIA+LKE+E +  +E+++Y L++ KF E  V LVP +S 
Sbjct:   139 SQGQNKDSASVPGTDI-VLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSVSP 197

Query:   163 CIY-NGRLEIWPSKDWELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRL 221
                 +GR++ WP+K  +LE +H  E+ EMI  H++ ++G R      D  +  +I +LR+
Sbjct:   198 SSDPSGRVDTWPTKVEKLERLHSPEMYEMIHNHLALILGSRMG----DLNSVAQISKLRV 253

Query:   222 GRVYVASILYGYFLKSASLRYYLEECLA--SAHQDLHLTHRNSLQFPEAWSYGLKQNQVV 279
             G+VY AS++YGYFLK    R+ LE+ +       D   T     +    +   +  +  V
Sbjct:   254 GQVYAASVMYGYFLKRVDQRFQLEKTMKILPGGSDESKTSVEQAEGTATYQAAVSSHPEV 313

Query:   280 GCVNNTQSISLGRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALF 339
             G      S    +G  G E+K   L+ YVM FD ETLQR A +RSREAV ++EKH+ ALF
Sbjct:   314 GAFAGGVS---AKGF-GSEIKPSRLRSYVMSFDAETLQRYATIRSREAVGIIEKHTEALF 369

Query:   340 GDGQT-----GLLDT--DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 385
             G  +      G +D+  DE I  SF  +KRLVLEA+ FGSFLWD E + DA Y
Sbjct:   370 GKPEIVITPEGTVDSSKDEQIKISFGGMKRLVLEAVTFGSFLWDVESHVDARY 422

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0010224 "response to UV-B" evidence=IGI;IEP

TAIR|locus:2198055 AT1G48450 "AT1G48450" [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 138/342 (40%), Positives = 194/342 (56%)

Query:    66 PLEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSS--GSDEGPLHR 123
             PL+  SP G+FLS++L +       AV  +L+ L  DRDA       SS  G+D   L+R
Sbjct:    85 PLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDI-VLYR 143

Query:   124 RIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKL--SRCIYNGRLEIWPSKDWELES 181
             RIA++KE E + A+E+++Y L++ KF +  V LVP +  S    +GR++ WP+ D ELE 
Sbjct:   144 RIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSITSSSADPSGRVDTWPTLDGELER 203

Query:   182 IHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLR 241
             +H  EV EMI+ H+S ++  R +    D  A  +I +L +G+VY AS++YGYFLK    R
Sbjct:   204 LHSPEVYEMIQNHLSIILKNRTD----DLTAVAQISKLGVGQVYAASVMYGYFLKRIDQR 259

Query:   242 YYLEECL-----------ASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVNNTQSISL 290
             + LE+ +            S  Q      RN  +  E     +  NQ VG       I+ 
Sbjct:   260 FQLEKTMRILPGGSDEGETSIEQAGRDVERNFYEEAEETYQAVSSNQDVGSF--VGGINA 317

Query:   291 GRGTNGHELKQENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQT-----G 345
               G +  ++KQ  LK YVM FD ETLQR A +RSRE+V ++EKH+ ALFG  +      G
Sbjct:   318 SGGFSS-DMKQSRLKTYVMSFDGETLQRYATIRSRESVGIIEKHTEALFGRPEIVITPQG 376

Query:   346 LLDT--DEVILTSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 385
              +D+  DE I  SF  LKRLVLEA+ FGSFLWD E + D+ Y
Sbjct:   377 TIDSSKDEHIKISFKGLKRLVLEAVTFGSFLWDVESHVDSRY 418

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031760 AT1G32160 "AT1G32160" [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 123/391 (31%), Positives = 206/391 (52%)

Query:    16 FLPPSKPRGPRSLPPSNSNF-----GXXXXXXSG----VVVQARAGPSPCEFSSSPLNTP 66
             FL PS    P  LP    +F     G      +G    V V+A +G      + +PL  P
Sbjct:    25 FLSPSS--SPSLLPQRCHSFCIPKLGSSSTNENGRGRSVTVRA-SGDEDSNENFAPL-AP 80

Query:    67 LEPNSPAGKFLSRVLQNQRQYFNLAVSDELKLLANDRDAAVARMSLSSGSDEGPLHRRIA 126
             +E  SP G+ L ++L+       + V ++L+  A + ++  A     S S +  L +RI+
Sbjct:    81 VELESPVGQLLEQILRTHPHLLPVTVDEQLEKFAAESESRKA----DSSSTQDILQKRIS 136

Query:   127 QLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYN-GRLEIWPSKDWELESIHEF 185
             ++++ E +  + +++Y L++++F E  + ++P++       GR+++WP+++ +LE IH  
Sbjct:   137 EVRDKERRKTLAEIIYCLVVHRFVEKGISMIPRIKPTSDPAGRIDLWPNQEEKLEVIHSA 196

Query:   186 EVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLE 245
             +  EMI+ H+S+V+G     +V    +  +I +++LG++Y AS +YGYFL+    RY LE
Sbjct:   197 DAFEMIQSHLSSVLG--DGPAVGPLSSIVQIGKIKLGKLYAASAMYGYFLRRVDQRYQLE 254

Query:   246 ECLASAHQDLHLTHRNSLQFPEAWSYGLKQNQVVGCVN----NTQSISLGRGTNGHELKQ 301
               + +  +    T R   + P    Y L     +  +     +    ++ R  N  E   
Sbjct:   255 RTMNTLPKRPEKT-RERFEEPSP-PYPLWDPDSLIRIQPEEYDPDEYAIQR--NEDESSS 310

Query:   302 ENLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDG-----QTGLLDT--DEVIL 354
               L+ YV   D +TLQR A +RS+EA+ L+EK + ALFG       + G LDT  DEV+ 
Sbjct:   311 YGLRSYVTYLDSDTLQRYATIRSKEAMTLIEKQTQALFGRPDIRILEDGKLDTSNDEVLS 370

Query:   355 TSFSSLKRLVLEAIAFGSFLWDAEEYADAVY 385
              S S L  LVLEA+AFGSFLWD+E Y ++ Y
Sbjct:   371 LSVSGLAMLVLEAVAFGSFLWDSESYVESKY 401


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      390       384   0.00091  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  263 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.78u 0.13s 32.91t   Elapsed:  00:00:01
  Total cpu time:  32.78u 0.13s 32.91t   Elapsed:  00:00:02
  Start:  Sat May 11 03:25:40 2013   End:  Sat May 11 03:25:42 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00002530 hypothetical protein (275 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	390
pfam05542	85	pfam05542, DUF760, Protein of unknown function (DU	1e-14

>gnl|CDD|203271 pfam05542, DUF760, Protein of unknown function (DUF760)

 Score = 68.7 bits (169), Expect = 1e-14
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 178 ELESIHEFEVLEMIREHISTVIGLRANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKS 237
            L      EVLE +R ++S ++G            T +  R  L ++  +S++ GYFL++
Sbjct: 17  RLADSASPEVLEAMRRNVSGLLGSL---PSDHFEVTIQTSRENLAQLLASSMMTGYFLRN 73

Query: 238 ASLRYYLEECL 248
           A  R  LE  L
Sbjct: 74  AEQRLELERSL 84

This family contains several uncharacterized plant proteins. Length = 85

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	390
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	99.93
PF05542	86	DUF760: Protein of unknown function (DUF760); Inte	97.73

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=99.93  E-value=8.1e-26  Score=184.84  Aligned_cols=85  Identities=29%  Similarity=0.409  Sum_probs=80.3

Q ss_pred             hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCcccccCCccccCCccchhhcccCchHHHHHHHHHHHHH
Q 016372          119 GPLHRRIAQLKEHECQTAVEDVMYMLILYKFSEIRVQLVPKLSRCIYNGRLEIWPSKDWELESIHEFEVLEMIREHISTV  198 (390)
Q Consensus       119 ~~LyrRIAevKe~Err~alEdImY~lIv~KF~e~~V~mvP~ls~~~~~Grl~~wP~~~~~Le~ihS~Ev~emI~~hl~~v  198 (390)
                      ++||++|++++. |+..+++|                                          +|||||+|+|++||.+|
T Consensus         1 n~L~~yi~~l~p-e~~~~l~~------------------------------------------~~s~ev~e~m~~~v~~l   37 (86)
T PF05542_consen    1 NDLLQYIQSLKP-ERIQQLSE------------------------------------------PASPEVLEAMKQHVSGL   37 (86)
T ss_pred             ChHHHHHHHCCH-HHHHHhhc------------------------------------------cCCHHHHHHHHHHHHHH
Confidence            479999999999 99999998                                          89999999999999999


Q ss_pred             hccc-cCCCCCCCcceeeechhhhhHHHHHHhhHhHHHhhHHHHHHHHHHHh
Q 016372          199 IGLR-ANCSVTDSWATTEIQRLRLGRVYVASILYGYFLKSASLRYYLEECLA  249 (390)
Q Consensus       199 LG~~-~~~~~~~~~~~~~isr~~Lg~vYAASmMyGYFLr~~eqR~qLE~sl~  249 (390)
                      ||++ |++.|+   ++++++|++||+||+++||||||||++|+|++||++|+
T Consensus        38 lG~l~p~~~~~---~~i~~s~~~La~L~~~~mm~GYfLr~~E~R~~Le~sL~   86 (86)
T PF05542_consen   38 LGNLSPSDQFN---VTIQTSRENLAQLLAWSMMTGYFLRNAEQRLELERSLK   86 (86)
T ss_pred             HcCCCCcccCc---ceeEECHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence            9999 887664   89999999999999999999999999999999999985

>PF05542 DUF760: Protein of unknown function (DUF760); InterPro: IPR008479 This entry contains uncharacterised proteins

Probab=97.73  E-value=0.00013  Score=60.12  Aligned_cols=76  Identities=26%  Similarity=0.369  Sum_probs=69.1

Q ss_pred             hhhhhhhcCCHHHHHHHhhhhhHHHHHHHHHHhhhhcCCCCCCCCCCCceEEechhhHHHHHHHHHHhhhhhhhhhh
Q 016372          303 NLKCYVMGFDPETLQRCAKLRSREAVNLVEKHSCALFGDGQTGLLDTDEVILTSFSSLKRLVLEAIAFGSFLWDAEE  379 (390)
Q Consensus       303 ~Lr~YVmsfD~eTLqr~AtirSkEAv~lIEkht~ALFG~~~~g~~~~dE~i~isfs~LkrLVLEAvAFGSFLwDvEs  379 (390)
                      .|..||.+.+|+++++.+++-|.|++.+|++|+..+-|.-. -....+-.|.++=..|-+|..=++.+|=|||.+|-
T Consensus         2 ~L~~yi~~l~pe~~~~l~~~~s~ev~e~m~~~v~~llG~l~-p~~~~~~~i~~s~~~La~L~~~~mm~GYfLr~~E~   77 (86)
T PF05542_consen    2 DLLQYIQSLKPERIQQLSEPASPEVLEAMKQHVSGLLGNLS-PSDQFNVTIQTSRENLAQLLAWSMMTGYFLRNAEQ   77 (86)
T ss_pred             hHHHHHHHCCHHHHHHhhccCCHHHHHHHHHHHHHHHcCCC-CcccCcceeEECHHHHHHHHHHHHHHhHHHHHHHH
Confidence            58899999999999999999999999999999999999875 23346678999999999999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00