Citrus Sinensis ID: 016392

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Protein Sequence
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
Secondary Structure (PSIPRED)
cccccHHHHHccccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEcEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHcccHHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHccccccccccHHccEEEEEEcccccccccccccEEEEEEEEEEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHcccccccccccEEEEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHcHHHHHHHHccccccccHHHHcccEEEEEEcccccccccccccccccccEEEEEHHHHccHHHHHHcHHHHcccccc
Coil and Loop (DISEMBL)
MANSKYEYVKSFevedeifspnllVVRIhgrdfqrfshdhgfekpnderALNLMNTCAVAVLeeypdivfsygysdeysFVFKRTSKFYQRRASKILSLIVSFFTSVYVTkwkeffplkefryppsfhsrviSCASIEVLQQYLAWRqndchvnnqYETCLWMLIkhgksenepndeQALNLMNSCAVAVLEEFEDitfaygvsdeYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWkeffpqkklnyppsfdgravcypssdiIRDYLAWRQVDCHINNQYNTCFWMLVKsgkskseaqgclkgTQAREKNELLIQKFgidysklplmfrqgsSIFRARTEKSVASENKSSVEKVWNKVLVSHCniiepsfwmahpsilneeppl
Flexible Loop (DISEMBL)
MANSKYEYVKSfevedeifspNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTeksvasenkssvekvWNKVLVSHCNIIepsfwmahpsilneeppl
Low Complexity Region (SEG)
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
Disordered region (IsUnstruct)
******EYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKH************LNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVK********************NELLIQKFGIDYSKLPLMFRQGSSIF***************VEKVWNKVLVSHCNIIEPSFWMAHP*********
Disordered Region (DISOPRED)
***SKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQ*CLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRA********************VLVSHCNIIEPSFWMAHPSILNEEPP*
Disordered Region (DISEMBL)
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSG*********LKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRAR************VEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
Disordered Region (DISPRO)
***SKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEK************VWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	390	2.2.26 [Sep-21-2011]
F4ISV6	537	tRNA(His) guanylyltransfe	yes	no	0.546	0.396	0.691	7e-86
F4IRQ5	567	tRNA(His) guanylyltransfe	no	no	0.535	0.368	0.671	9e-82
Q05B50	298	Probable tRNA(His) guanyl	yes	no	0.551	0.721	0.466	5e-55
Q9CY52	298	Probable tRNA(His) guanyl	yes	no	0.551	0.721	0.444	1e-53
Q9NWX6	298	Probable tRNA(His) guanyl	yes	no	0.551	0.721	0.448	2e-53
Q5M965	298	Probable tRNA(His) guanyl	yes	no	0.551	0.721	0.431	2e-51
Q54E29	256	Probable tRNA(His) guanyl	yes	no	0.533	0.812	0.481	5e-51
Q7SDM8	293	tRNA(His) guanylyltransfe	N/A	no	0.553	0.737	0.444	6e-49
Q9V3N8	286	Probable tRNA(His) guanyl	yes	no	0.530	0.723	0.431	1e-48
Q9Y7T3	261	tRNA(His) guanylyltransfe	yes	no	0.533	0.796	0.457	3e-46

>sp|F4ISV6|THG2_ARATH tRNA(His) guanylyltransferase 2 OS=Arabidopsis thaliana GN=THG2 PE=1 SV=1

 Score =  317 bits (813), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVLKN S  Y+RQ+S+I+S +VSF
Sbjct: 322 KPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVLKNKSELYKRQSSKIISAVVSF 381

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 382 FTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLDYLAWRQVDCHINNQYNTCFWM 441

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP++FR GSS+FR +T++ V  E
Sbjct: 442 LVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLPVIFRMGSSVFRLKTQEGVTEE 501

Query: 353 N-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
           N + S ++V  +V V + NII+  FW  HP IL+
Sbjct: 502 NGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 535

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 7EC: 9

>sp|F4IRQ5|THG1_ARATH tRNA(His) guanylyltransferase 1 OS=Arabidopsis thaliana GN=THG1 PE=1 SV=1

 Score =  304 bits (778), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 143/213 (67%), Positives = 172/213 (80%), Gaps = 4/213 (1%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEFEDI FAYGVSDEYSFVLK  S  Y+RQ+S+I+S + SF
Sbjct: 357 KPNDEQALKLMNSCAVAVLEEFEDIHFAYGVSDEYSFVLKKESELYKRQSSKIISAVASF 416

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS YV++W EFFP K+L YPPSFDGRAVCYP+ +I+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 417 FTSTYVLQWGEFFPHKELKYPPSFDGRAVCYPTYNILLDYLAWRQVDCHINNQYNTCFWM 476

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGK+K+++Q  LKGTQ REKNELL ++FGI+Y+ LP++FR GSS+FR +     A  
Sbjct: 477 LVKSGKNKTQSQDYLKGTQTREKNELLSRQFGIEYNSLPVIFRMGSSVFRLKE----AEN 532

Query: 353 NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
              S +K+  +V+V HCNIIE  FW  H  IL+
Sbjct: 533 GVVSGKKLEGEVVVDHCNIIERCFWEEHLHILS 565

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q05B50|THG1_BOVIN Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1

 Score =  215 bits (547), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 105/225 (46%), Positives = 146/225 (64%), Gaps = 10/225 (4%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND +AL+LM  CA  V+ E EDI  AYG SDEYSFV K  S +++R+AS+ ++ +VS 
Sbjct: 73  KPNDSRALHLMTKCAQTVMNELEDIVIAYGQSDEYSFVFKRKSNWFKRRASKFMTHVVSQ 132

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           F S YV  W+++F  + L YPP FDGR + YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct: 133 FASSYVFYWRDYFEDQPLLYPPGFDGRVIVYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           LV +SG +  +AQ  L+GT A +KNE+L  +F I+Y+  PLM+R+G+ +   + E+    
Sbjct: 193 LVQQSGLTPLQAQERLQGTLAADKNEILFSEFNINYNNEPLMYRKGTVLIWQKVEEITTK 252

Query: 352 ENKSSVEKVWNKVLVS---------HCNIIEPSFWMAHPSILNEE 387
           E K   E    K+ V+         HCNII  +FW  HP IL+E+
Sbjct: 253 EVKLPAEMEGKKMAVTRTRTMVVPLHCNIIGDAFWKEHPEILDED 297

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q9CY52|THG1_MOUSE Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1

 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/225 (44%), Positives = 145/225 (64%), Gaps = 10/225 (4%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND +AL+LM  CA  V+EE EDI  AYG SDEYSFV +  S +++R+AS+ ++++ S 
Sbjct: 73  KPNDSRALHLMTKCAQTVMEELEDIVIAYGQSDEYSFVFRKKSNWFKRRASKFMTLVASQ 132

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           F S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct: 133 FASSYVFYWRDYFEDQPLRYPPGFDGRVVLYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           L+ +SG +  +AQ  LKGT   +KNE+L  +F I+Y+  P M+R+G+ +   + E+    
Sbjct: 193 LIQQSGLTPVQAQQRLKGTLTADKNEILFSEFHINYNNEPHMYRKGTVLVWQKVEEVRTQ 252

Query: 352 E---------NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
           E          K +V +   +V+  +C++I  +FW  HP IL EE
Sbjct: 253 EVRLPAEMEGEKKAVARTRTRVVALNCDLIGDAFWKEHPEILAEE 297

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q9NWX6|THG1_HUMAN Probable tRNA(His) guanylyltransferase OS=Homo sapiens GN=THG1L PE=1 SV=2

 Score =  209 bits (533), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/225 (44%), Positives = 145/225 (64%), Gaps = 10/225 (4%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND +AL LM  CA  V+EE EDI  AYG SDEYSFV K  + +++R+AS+ ++ + S 
Sbjct: 73  KPNDSRALQLMTKCAQTVMEELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQ 132

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           F S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct: 133 FASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           L+ +SG +  +AQG L+GT A +KNE+L  +F I+Y+    M+R+G+ +   + ++ +  
Sbjct: 193 LIQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTK 252

Query: 352 ENKSSVEKVWNKVLVS---------HCNIIEPSFWMAHPSILNEE 387
           E K   E    K+ V+         HC+II  +FW  HP IL+E+
Sbjct: 253 EIKLPTEMEGKKMAVTRTRTKPVPLHCDIIGDAFWKEHPEILDED 297

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q5M965|THG1_RAT Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1

 Score =  203 bits (517), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/225 (43%), Positives = 143/225 (63%), Gaps = 10/225 (4%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND +AL+LM  CA  V++E EDI  AYG SDEYSFV +  S +++R+AS+ ++++ S 
Sbjct: 73  KPNDSRALHLMTKCAQTVMQELEDIVIAYGQSDEYSFVFRKRSNWFKRRASKFMTLVASQ 132

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           F S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct: 133 FASSYVFYWRDYFEDQPLLYPPGFDGRVVLYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           L+ +SG +  +AQ  LKGT   +KNE+L  +F I+Y+  P M+R+G+ +   +  +    
Sbjct: 193 LIQQSGLTPVQAQQRLKGTLTADKNEILFSEFHINYNNEPHMYRKGTVLVWQKVNEVRTQ 252

Query: 352 E---------NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
           E          K +V +   K++  +C++I  +FW  HP IL  E
Sbjct: 253 EIRLPAEMEGEKMAVTRTRTKLVALNCDLIGDAFWKEHPEILEGE 297

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q54E29|THG1_DICDI Probable tRNA(His) guanylyltransferase OS=Dictyostelium discoideum GN=thg1 PE=3 SV=1

 Score =  202 bits (513), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 148/214 (69%), Gaps = 6/214 (2%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND++ L+LMN  A+ V +EF DI  A+G SDEYSFVLK +   ++R++S+I S IVS+
Sbjct: 44  KPNDDRGLSLMNRAALEVCKEFPDIVIAFGESDEYSFVLKKSCNLFERRSSKISSSIVSY 103

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS +V +WKE+F + +L YPP+FD R V YP+ + I+DYL+WRQ D HINN YNTC+W 
Sbjct: 104 FTSQFVYRWKEYFGEHELKYPPTFDSRCVLYPTDENIKDYLSWRQADTHINNLYNTCYWA 163

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           LV K+GK+  EA+  L+GT +  KNE+L  +F I+Y+ LP  +R+GS IF+    K V  
Sbjct: 164 LVLKAGKTPIEAENELRGTFSDGKNEMLFSRFNINYNNLPAEYRKGSVIFK----KPVQE 219

Query: 352 ENK-SSVEKVWNKVLVSHCNIIEPSFWMAHPSIL 384
            NK + + K   ++++ H +II   FW  +P IL
Sbjct: 220 TNKETGLTKSKKRLVIEHVDIISEKFWKEYPDIL 253

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q7SDM8|THG1_NEUCR tRNA(His) guanylyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=thg-1 PE=3 SV=1

 Score =  195 bits (495), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/243 (44%), Positives = 148/243 (60%), Gaps = 27/243 (11%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND++AL+LMN+ A +V+ E  DIT AYGVSDEYSFV   +   ++R+AS++VS IVS 
Sbjct: 44  KPNDKRALDLMNAAARSVMSELPDITIAYGVSDEYSFVFHKSCTLFERRASKLVSTIVST 103

Query: 233 FTSMYVVKWKEFF--PQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCF 290
           FT+ Y+  W  +F          PSFDGRAVCYPS   +RDY++WRQVDCHINN YNT F
Sbjct: 104 FTAYYIHHWPTYFVDGPPLSPPLPSFDGRAVCYPSVQNLRDYMSWRQVDCHINNLYNTTF 163

Query: 291 WMLV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFR------A 343
           W L+ + G   + A+  LKGT + +KNE+L +KFGI+Y+  P MF++GS +FR       
Sbjct: 164 WALINQGGMDGTAAELMLKGTFSADKNEILFKKFGINYNNEPEMFKKGSVVFRNYELVEP 223

Query: 344 RTEKSVAS-------------ENKSSVEK-----VWNKVLVSHCNIIEPSFWMAHPSILN 385
            T+K                 ++KS VEK        K++V H +II   FW   P +L+
Sbjct: 224 GTKKVSEEEAEEMSSSAVPEVKSKSQVEKDKKVRTKAKIVVEHLDIIRDEFWERRPWLLS 283

Query: 386 EEP 388
             P
Sbjct: 284 GTP 286

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q9V3N8|THG1_DROME Probable tRNA(His) guanylyltransferase OS=Drosophila melanogaster GN=l(2)35Bc PE=2 SV=1

 Score =  194 bits (493), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/218 (43%), Positives = 138/218 (63%), Gaps = 11/218 (5%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDE ALN+MN+ A AV++EF DI  AYG SDEYSFV +  +  ++R+++++++ + S 
Sbjct: 44  KPNDENALNVMNAAATAVMQEFRDIVLAYGQSDEYSFVFRKETAAFKRRSAKLLTYVTSL 103

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           F+S YV++W ++     L Y P FDGR V YPS   ++DYL+WRQ D H+NN YNT FW 
Sbjct: 104 FSSSYVMQWSKWM-NLPLAYAPCFDGRVVLYPSEQNLKDYLSWRQADVHVNNLYNTAFWK 162

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           LV + G +  +A+  L+GT + +KNELL Q+FGI+Y+ LP M+R+G+ + R R       
Sbjct: 163 LVLEKGLTNQQAEAKLRGTFSADKNELLFQEFGINYNNLPAMYRKGTILLRKRVILG--- 219

Query: 352 ENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPP 389
                 EK    V+  H ++I   FW  H  IL +  P
Sbjct: 220 ------EKSRQAVVPLHEDLISSQFWKEHTEILGKYVP 251

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

>sp|Q9Y7T3|THG1_SCHPO tRNA(His) guanylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thg1 PE=3 SV=1

 Score =  186 bits (472), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 139/212 (65%), Gaps = 4/212 (1%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND + LNLMN+ A  V+ EF DI  AYG SDEYSFV   ++  Y+R+ S++VS + S 
Sbjct: 44  KPNDLRCLNLMNAAARVVMSEFTDIVLAYGDSDEYSFVWSKSTELYERRESKLVSHVCSL 103

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS +V  W + F    L+  PSFDGRAV YP+  ++RDYL WRQVDCHINN YNT FWM
Sbjct: 104 FTSAFVFNWPKHFDIPLLSL-PSFDGRAVLYPNMKVLRDYLHWRQVDCHINNLYNTTFWM 162

Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           L+ K G + ++A+  LKGT + EK+E+L  KFGI+Y+  P ++++GS   R   ++    
Sbjct: 163 LILKGGFTNTQAEEYLKGTVSAEKHEILFSKFGINYNFEPEIYKKGSIWIREPIDQEWHQ 222

Query: 352 ENKSSVEKVWNKVLVS--HCNIIEPSFWMAHP 381
           ++K    K   K+++S  H ++I+  FW + P
Sbjct: 223 QDKKFSVKQKKKMVLSILHVSLIDDDFWTSRP 254

Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 7

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	390
296082524	1073	unnamed protein product [Vitis vinifera]	0.548	0.199	0.754	3e-93
359480859	562	PREDICTED: uncharacterized protein LOC10	0.553	0.384	0.747	6e-93
297789848	525	hypothetical protein ARALYDRAFT_920213 [	0.546	0.405	0.710	2e-86
238479416	537	tRNAHis guanylyltransferase [Arabidopsis	0.546	0.396	0.691	4e-84
238479418	532	tRNAHis guanylyltransferase [Arabidopsis	0.546	0.400	0.691	4e-84
186504734	525	tRNAHis guanylyltransferase [Arabidopsis	0.546	0.405	0.691	5e-84
297826599	520	hypothetical protein ARALYDRAFT_344921 [	0.535	0.401	0.680	6e-82
449515815	520	PREDICTED: tRNA(His) guanylyltransferase	0.594	0.446	0.622	5e-81
449448430	520	PREDICTED: tRNA(His) guanylyltransferase	0.594	0.446	0.622	8e-81
42569521	567	tRNAHis guanylyltransferase [Arabidopsis	0.535	0.368	0.671	6e-80

>gi|296082524|emb|CBI21529.3| unnamed protein product [Vitis vinifera]

 Score =  348 bits (893), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 163/216 (75%), Positives = 186/216 (86%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQALNLMNSCAVAVLE+F+D+ F+YGVSDEYSFVLK  S FYQR+ SEIV+ +VS+
Sbjct: 770 KPNDEQALNLMNSCAVAVLEQFKDVIFSYGVSDEYSFVLKKDSQFYQRRGSEIVTALVSY 829

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS+YV+KWKEFFPQK+L YPP FDGRAV YP+S+I+RDYL WRQVDCHINNQYNTCFWM
Sbjct: 830 FTSIYVMKWKEFFPQKELKYPPCFDGRAVLYPTSEILRDYLTWRQVDCHINNQYNTCFWM 889

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSKSEAQ  LKGTQAREKNE+L+Q+FGIDY+ LPLMFRQGSS F    EK+   E
Sbjct: 890 LVKSGKSKSEAQAYLKGTQAREKNEVLLQQFGIDYNTLPLMFRQGSSAFWNEEEKTGMYE 949

Query: 353 NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEP 388
           N +S EK   KV+V  CNIIE SFW AHPSILNE+P
Sbjct: 950 NGASAEKSGKKVVVEQCNIIEQSFWEAHPSILNEKP 985

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480859|ref|XP_002275722.2| PREDICTED: uncharacterized protein LOC100264494 [Vitis vinifera]

 Score =  347 bits (890), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 163/218 (74%), Positives = 187/218 (85%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQALNLMNSCAVAVLE+F+D+ F+YGVSDEYSFVLK  S FYQR+ SEIV+ +VS+
Sbjct: 344 KPNDEQALNLMNSCAVAVLEQFKDVIFSYGVSDEYSFVLKKDSQFYQRRGSEIVTALVSY 403

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS+YV+KWKEFFPQK+L YPP FDGRAV YP+S+I+RDYL WRQVDCHINNQYNTCFWM
Sbjct: 404 FTSIYVMKWKEFFPQKELKYPPCFDGRAVLYPTSEILRDYLTWRQVDCHINNQYNTCFWM 463

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSKSEAQ  LKGTQAREKNE+L+Q+FGIDY+ LPLMFRQGSS F    EK+   E
Sbjct: 464 LVKSGKSKSEAQAYLKGTQAREKNEVLLQQFGIDYNTLPLMFRQGSSAFWNEEEKTGMYE 523

Query: 353 NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEPPL 390
           N +S EK   KV+V  CNIIE SFW AHPSILNE+P +
Sbjct: 524 NGASAEKSGKKVVVEQCNIIEQSFWEAHPSILNEKPHM 561

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297789848|ref|XP_002862851.1| hypothetical protein ARALYDRAFT_920213 [Arabidopsis lyrata subsp. lyrata] gi|297308599|gb|EFH39109.1| hypothetical protein ARALYDRAFT_920213 [Arabidopsis lyrata subsp. lyrata]

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/214 (71%), Positives = 182/214 (85%), Gaps = 1/214 (0%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEF+DI FAYGVSDEYSFVLKN S  Y+RQ+S+I+S IVSF
Sbjct: 310 KPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEYSFVLKNKSELYKRQSSKIISAIVSF 369

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS YV++W +FFP K L YPPSFDGRAVCYP+SDI+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 370 FTSTYVMRWGDFFPHKNLKYPPSFDGRAVCYPTSDILLDYLAWRQVDCHINNQYNTCFWM 429

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSK++AQ  LKGTQ REKNELLIQ+FGI+Y+ LP++FR GSS+FR +T++ VA E
Sbjct: 430 LVKSGKSKTQAQDYLKGTQTREKNELLIQQFGIEYNSLPVIFRLGSSVFRLKTQEGVAEE 489

Query: 353 N-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
           N + S ++V  +V+V + NII+  FW  HP IL+
Sbjct: 490 NGEVSGKQVEAEVVVDYSNIIDQCFWQQHPHILS 523

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238479416|ref|NP_001154544.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|426021263|sp|F4ISV6.1|THG2_ARATH RecName: Full=tRNA(His) guanylyltransferase 2 gi|330253575|gb|AEC08669.1| tRNAHis guanylyltransferase [Arabidopsis thaliana]

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVLKN S  Y+RQ+S+I+S +VSF
Sbjct: 322 KPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVLKNKSELYKRQSSKIISAVVSF 381

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 382 FTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLDYLAWRQVDCHINNQYNTCFWM 441

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP++FR GSS+FR +T++ V  E
Sbjct: 442 LVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLPVIFRMGSSVFRLKTQEGVTEE 501

Query: 353 N-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
           N + S ++V  +V V + NII+  FW  HP IL+
Sbjct: 502 NGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 535

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238479418|ref|NP_001154545.1| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|330253576|gb|AEC08670.1| tRNAHis guanylyltransferase [Arabidopsis thaliana]

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVLKN S  Y+RQ+S+I+S +VSF
Sbjct: 317 KPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVLKNKSELYKRQSSKIISAVVSF 376

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 377 FTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLDYLAWRQVDCHINNQYNTCFWM 436

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP++FR GSS+FR +T++ V  E
Sbjct: 437 LVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLPVIFRMGSSVFRLKTQEGVTEE 496

Query: 353 N-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
           N + S ++V  +V V + NII+  FW  HP IL+
Sbjct: 497 NGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 530

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186504734|ref|NP_180791.3| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|330253574|gb|AEC08668.1| tRNAHis guanylyltransferase [Arabidopsis thaliana]

 Score =  317 bits (813), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVLKN S  Y+RQ+S+I+S +VSF
Sbjct: 310 KPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVLKNKSELYKRQSSKIISAVVSF 369

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 370 FTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLDYLAWRQVDCHINNQYNTCFWM 429

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP++FR GSS+FR +T++ V  E
Sbjct: 430 LVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLPVIFRMGSSVFRLKTQEGVTEE 489

Query: 353 N-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
           N + S ++V  +V V + NII+  FW  HP IL+
Sbjct: 490 NGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 523

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826599|ref|XP_002881182.1| hypothetical protein ARALYDRAFT_344921 [Arabidopsis lyrata subsp. lyrata] gi|297327021|gb|EFH57441.1| hypothetical protein ARALYDRAFT_344921 [Arabidopsis lyrata subsp. lyrata]

 Score =  310 bits (795), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 145/213 (68%), Positives = 174/213 (81%), Gaps = 4/213 (1%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEFEDI FAYGVSDEYSFVLK  S  Y+RQ+S+I+S I SF
Sbjct: 310 KPNDEQALKLMNSCAVAVLEEFEDIHFAYGVSDEYSFVLKKESELYKRQSSKIISAITSF 369

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS YV++W EFFP K++ YPPSFDGRAVCYP+ +I+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 370 FTSTYVLQWGEFFPHKEMKYPPSFDGRAVCYPTHNILLDYLAWRQVDCHINNQYNTCFWM 429

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGK+K+++Q  LKGTQ REKNELL ++FGI+Y+ LP++FR GSS+FR +     A  
Sbjct: 430 LVKSGKTKTQSQDYLKGTQTREKNELLSRQFGIEYNALPVIFRMGSSVFRRKE----AEN 485

Query: 353 NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
              S +K+  +V+V HCNIIE SFW  HP IL+
Sbjct: 486 GVVSGKKLEGEVVVDHCNIIEHSFWEEHPHILS 518

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515815|ref|XP_004164943.1| PREDICTED: tRNA(His) guanylyltransferase 1-like [Cucumis sativus]

 Score =  307 bits (787), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 152/244 (62%), Positives = 181/244 (74%), Gaps = 12/244 (4%)

Query: 152 HVNNQYETCLWMLIK------HGKSE----NEPNDEQALNLMNSCAVAVLEEFEDITFAY 201
            V N+     W++I+      H  SE     +PNDE ALNLMNSCAVAV+E+  D+ F+Y
Sbjct: 279 QVENKLMPSTWIVIRIDGCHFHRFSEVHVFEKPNDEHALNLMNSCAVAVMEKLSDLVFSY 338

Query: 202 GVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAV 261
           GVSDEYSFVLK  S  Y R ASEIVSVIVS F+S+YV+KW+EFFP K+L YPPSFDGRAV
Sbjct: 339 GVSDEYSFVLKKDSQIYGRAASEIVSVIVSLFSSLYVMKWREFFPHKELKYPPSFDGRAV 398

Query: 262 CYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQ 321
           CYP+ +I+RDYLAWRQVDCHINNQYNTCFW LVKSGKSKSEAQ CLKGTQ +EK  LL  
Sbjct: 399 CYPTREILRDYLAWRQVDCHINNQYNTCFWELVKSGKSKSEAQACLKGTQTQEKEHLLNL 458

Query: 322 KFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHP 381
           +F I Y++LPLMFRQGSS F  + + +   +N  +  K   K++V H NIIEPSFW  HP
Sbjct: 459 RFNISYNELPLMFRQGSSAFWDKKDATTVDKNPDACCK--RKIVVVHSNIIEPSFWEDHP 516

Query: 382 SILN 385
            IL+
Sbjct: 517 WILD 520

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448430|ref|XP_004141969.1| PREDICTED: tRNA(His) guanylyltransferase 1-like [Cucumis sativus]

 Score =  306 bits (785), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 152/244 (62%), Positives = 180/244 (73%), Gaps = 12/244 (4%)

Query: 152 HVNNQYETCLWMLIK------HGKSE----NEPNDEQALNLMNSCAVAVLEEFEDITFAY 201
            V N+     W++I+      H  SE     +PNDE ALNLMNSCAVAV+E+  D  F+Y
Sbjct: 279 QVENKLMPSTWIVIRIDGCHFHRFSEVHVFEKPNDEHALNLMNSCAVAVMEKLSDFVFSY 338

Query: 202 GVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAV 261
           GVSDEYSFVLK  S  Y R ASEIVSVIVS F+S+YV+KW+EFFP K+L YPPSFDGRAV
Sbjct: 339 GVSDEYSFVLKKDSQIYGRAASEIVSVIVSLFSSLYVMKWREFFPHKELKYPPSFDGRAV 398

Query: 262 CYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQ 321
           CYP+ +I+RDYLAWRQVDCHINNQYNTCFW LVKSGKSKSEAQ CLKGTQ +EK  LL  
Sbjct: 399 CYPTREILRDYLAWRQVDCHINNQYNTCFWELVKSGKSKSEAQACLKGTQTQEKERLLNL 458

Query: 322 KFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHP 381
           +F I Y++LPLMFRQGSS F  + + +   +N  +  K   K++V H NIIEPSFW  HP
Sbjct: 459 RFNISYNELPLMFRQGSSAFWDKKDATTVDKNPDACCK--RKIVVVHSNIIEPSFWEDHP 516

Query: 382 SILN 385
            IL+
Sbjct: 517 WILD 520

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569521|ref|NP_565727.2| tRNAHis guanylyltransferase [Arabidopsis thaliana] gi|426021251|sp|F4IRQ5.1|THG1_ARATH RecName: Full=tRNA(His) guanylyltransferase 1 gi|330253469|gb|AEC08563.1| tRNAHis guanylyltransferase [Arabidopsis thaliana]

 Score =  304 bits (778), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 143/213 (67%), Positives = 172/213 (80%), Gaps = 4/213 (1%)

Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PNDEQAL LMNSCAVAVLEEFEDI FAYGVSDEYSFVLK  S  Y+RQ+S+I+S + SF
Sbjct: 357 KPNDEQALKLMNSCAVAVLEEFEDIHFAYGVSDEYSFVLKKESELYKRQSSKIISAVASF 416

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS YV++W EFFP K+L YPPSFDGRAVCYP+ +I+ DYLAWRQVDCHINNQYNTCFWM
Sbjct: 417 FTSTYVLQWGEFFPHKELKYPPSFDGRAVCYPTYNILLDYLAWRQVDCHINNQYNTCFWM 476

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           LVKSGK+K+++Q  LKGTQ REKNELL ++FGI+Y+ LP++FR GSS+FR +     A  
Sbjct: 477 LVKSGKNKTQSQDYLKGTQTREKNELLSRQFGIEYNSLPVIFRMGSSVFRLKE----AEN 532

Query: 353 NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
              S +K+  +V+V HCNIIE  FW  H  IL+
Sbjct: 533 GVVSGKKLEGEVVVDHCNIIERCFWEEHLHILS 565

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	390
TAIR|locus:2062611	537	AT2G32320 [Arabidopsis thalian	0.546	0.396	0.691	7.1e-154
TAIR|locus:2065934	567	AT2G31580 [Arabidopsis thalian	0.535	0.368	0.671	4e-151
UNIPROTKB|Q05B50	298	THG1L "Probable tRNA(His) guan	0.551	0.721	0.466	1e-52
DICTYBASE|DDB_G0291830	256	thg1 "tRNA-histidine guanylylt	0.533	0.812	0.481	1.3e-52
UNIPROTKB|Q5ZIR4	269	THG1L "Uncharacterized protein	0.551	0.799	0.48	2.1e-52
UNIPROTKB|Q9NWX6	298	THG1L "Probable tRNA(His) guan	0.548	0.718	0.455	5.1e-51
UNIPROTKB|J9P6K8	282	THG1L "Uncharacterized protein	0.574	0.794	0.444	5.1e-51
MGI|MGI:1913878	298	Thg1l "tRNA-histidine guanylyl	0.551	0.721	0.448	6.5e-51
UNIPROTKB|Q7SDM8	293	thg-1 "tRNA(His) guanylyltrans	0.435	0.580	0.537	6.8e-51
UNIPROTKB|E2RA61	298	THG1L "Uncharacterized protein	0.551	0.721	0.453	2.8e-50

TAIR|locus:2062611 AT2G32320 [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 7.1e-154, Sum P(2) = 7.1e-154
 Identities = 148/214 (69%), Positives = 179/214 (83%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PNDEQAL LMNSCAVAVLEEF+DI FAYGVSDE+SFVLKN S  Y+RQ+S+I+S +VSF
Sbjct:   322 KPNDEQALKLMNSCAVAVLEEFQDIAFAYGVSDEFSFVLKNKSELYKRQSSKIISAVVSF 381

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             FTS Y+++W +FFP KKL YPPSFDGRAVCYP+SDI+ DYLAWRQVDCHINNQYNTCFWM
Sbjct:   382 FTSTYMMRWGDFFPHKKLKYPPSFDGRAVCYPTSDILLDYLAWRQVDCHINNQYNTCFWM 441

Query:   293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
             LVKSGKSK +AQ  LKGTQ REKNELL Q+FGI+Y+ LP++FR GSS+FR +T++ V  E
Sbjct:   442 LVKSGKSKIQAQDYLKGTQTREKNELLSQQFGIEYNSLPVIFRMGSSVFRLKTQEGVTEE 501

Query:   353 N-KSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
             N + S ++V  +V V + NII+  FW  HP IL+
Sbjct:   502 NGEVSGKQVEAEVGVDYSNIIDQCFWQQHPHILS 535

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006400 "tRNA modification" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

TAIR|locus:2065934 AT2G31580 [Arabidopsis thaliana (taxid:3702)]

 Score = 765 (274.4 bits), Expect = 4.0e-151, Sum P(2) = 4.0e-151
 Identities = 143/213 (67%), Positives = 172/213 (80%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PNDEQAL LMNSCAVAVLEEFEDI FAYGVSDEYSFVLK  S  Y+RQ+S+I+S + SF
Sbjct:   357 KPNDEQALKLMNSCAVAVLEEFEDIHFAYGVSDEYSFVLKKESELYKRQSSKIISAVASF 416

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             FTS YV++W EFFP K+L YPPSFDGRAVCYP+ +I+ DYLAWRQVDCHINNQYNTCFWM
Sbjct:   417 FTSTYVLQWGEFFPHKELKYPPSFDGRAVCYPTYNILLDYLAWRQVDCHINNQYNTCFWM 476

Query:   293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
             LVKSGK+K+++Q  LKGTQ REKNELL ++FGI+Y+ LP++FR GSS+FR +     A  
Sbjct:   477 LVKSGKNKTQSQDYLKGTQTREKNELLSRQFGIEYNSLPVIFRMGSSVFRLKE----AEN 532

Query:   353 NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILN 385
                S +K+  +V+V HCNIIE  FW  H  IL+
Sbjct:   533 GVVSGKKLEGEVVVDHCNIIERCFWEEHLHILS 565

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006400 "tRNA modification" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

UNIPROTKB|Q05B50 THG1L "Probable tRNA(His) guanylyltransferase" [Bos taurus (taxid:9913)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 105/225 (46%), Positives = 146/225 (64%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND +AL+LM  CA  V+ E EDI  AYG SDEYSFV K  S +++R+AS+ ++ +VS 
Sbjct:    73 KPNDSRALHLMTKCAQTVMNELEDIVIAYGQSDEYSFVFKRKSNWFKRRASKFMTHVVSQ 132

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             F S YV  W+++F  + L YPP FDGR + YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct:   133 FASSYVFYWRDYFEDQPLLYPPGFDGRVIVYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query:   293 LVK-SGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
             LV+ SG +  +AQ  L+GT A +KNE+L  +F I+Y+  PLM+R+G+ +   + E+    
Sbjct:   193 LVQQSGLTPLQAQERLQGTLAADKNEILFSEFNINYNNEPLMYRKGTVLIWQKVEEITTK 252

Query:   352 ENKSSVEKVWNKVLVS---------HCNIIEPSFWMAHPSILNEE 387
             E K   E    K+ V+         HCNII  +FW  HP IL+E+
Sbjct:   253 EVKLPAEMEGKKMAVTRTRTMVVPLHCNIIGDAFWKEHPEILDED 297

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

DICTYBASE|DDB_G0291830 thg1 "tRNA-histidine guanylyltransferase 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 103/214 (48%), Positives = 148/214 (69%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND++ L+LMN  A+ V +EF DI  A+G SDEYSFVLK +   ++R++S+I S IVS+
Sbjct:    44 KPNDDRGLSLMNRAALEVCKEFPDIVIAFGESDEYSFVLKKSCNLFERRSSKISSSIVSY 103

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             FTS +V +WKE+F + +L YPP+FD R V YP+ + I+DYL+WRQ D HINN YNTC+W 
Sbjct:   104 FTSQFVYRWKEYFGEHELKYPPTFDSRCVLYPTDENIKDYLSWRQADTHINNLYNTCYWA 163

Query:   293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
             LV K+GK+  EA+  L+GT +  KNE+L  +F I+Y+ LP  +R+GS IF+    K V  
Sbjct:   164 LVLKAGKTPIEAENELRGTFSDGKNEMLFSRFNINYNNLPAEYRKGSVIFK----KPVQE 219

Query:   352 ENKSS-VEKVWNKVLVSHCNIIEPSFWMAHPSIL 384
              NK + + K   ++++ H +II   FW  +P IL
Sbjct:   220 TNKETGLTKSKKRLVIEHVDIISEKFWKEYPDIL 253

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA;ISS

GO:0006400 "tRNA modification" evidence=IEA;ISS

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016779 "nucleotidyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q5ZIR4 THG1L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 108/225 (48%), Positives = 149/225 (66%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND++AL+LM  CA  V++E EDI  AYG SDEYSFV K  S +++R+AS+ ++ +VS 
Sbjct:    44 KPNDDRALHLMTKCAQTVMQELEDIAIAYGQSDEYSFVFKKKSKWFKRRASKFMTHVVSQ 103

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             F S YV  WK++F  ++L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FWM
Sbjct:   104 FASSYVFYWKDYFKDQQLLYPPGFDGRIVLYPSNQNLKDYLSWRQADCHINNLYNTVFWM 163

Query:   293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIF-----RARTE 346
             LV +SG +  +AQ  L+GT A +KNE+L  +F I+Y+  PLM+R+G+ +         T+
Sbjct:   164 LVQRSGLTPVQAQDRLQGTLAGDKNEILFSEFNINYNNEPLMYRKGTVLIWQKVNEVMTK 223

Query:   347 K---SVASENKS-SVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
             K      SE K   V +   KV+  HC+II   FW  +P IL E+
Sbjct:   224 KIKLPKESEEKEVEVTRTRTKVVPLHCDIIGEQFWEEYPEILAED 268

GO:0006400 "tRNA modification" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

UNIPROTKB|Q9NWX6 THG1L "Probable tRNA(His) guanylyltransferase" [Homo sapiens (taxid:9606)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 103/226 (45%), Positives = 148/226 (65%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND +AL LM  CA  V+EE EDI  AYG SDEYSFV K  + +++R+AS+ ++ + S 
Sbjct:    73 KPNDSRALQLMTKCAQTVMEELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQ 132

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             F S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct:   133 FASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query:   293 LVK-SGKSKSEAQGCLKGTQAREKNELLIQKFGIDYS-KLPLMFRQGSSIFRARTEKSVA 350
             L++ SG +  +AQG L+GT A +KNE+L  +F I+Y+ +LP M+R+G+ +   + ++ + 
Sbjct:   193 LIQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELP-MYRKGTVLIWQKVDEVMT 251

Query:   351 SENKSSVEKVWNKVLVS---------HCNIIEPSFWMAHPSILNEE 387
              E K   E    K+ V+         HC+II  +FW  HP IL+E+
Sbjct:   252 KEIKLPTEMEGKKMAVTRTRTKPVPLHCDIIGDAFWKEHPEILDED 297

GO:0005737 "cytoplasm" evidence=ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISS;IDA

GO:0008033 "tRNA processing" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA;IPI

GO:0005739 "mitochondrion" evidence=IDA

GO:0005525 "GTP binding" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0000049 "tRNA binding" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

UNIPROTKB|J9P6K8 THG1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 105/236 (44%), Positives = 152/236 (64%)

Query:   162 WMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQ 221
             W   KH  ++  PND +AL+LM  CA  V++E EDI  AYG SDEYSFV K  S +++R+
Sbjct:    48 WFAEKHNFAK--PNDSRALHLMTKCAQTVMKELEDIVIAYGQSDEYSFVFKRKSNWFKRR 105

Query:   222 ASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCH 281
             AS+ ++ + S F S +V  W+++F  + L YPP FDGR + YPS+  ++DYL+WRQ DCH
Sbjct:   106 ASKFMTHVASQFASSFVFYWRDYFEDQPLLYPPGFDGRVIVYPSNQTLKDYLSWRQADCH 165

Query:   282 INNQYNTCFWMLVK-SGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSI 340
             INN YNT FW LV+ SG + ++AQ  L+GT A +KNE+L  +F I+Y+  PLM+R+G+ +
Sbjct:   166 INNLYNTVFWALVQQSGLTPAQAQERLQGTLAADKNEILFSEFNINYNNEPLMYRKGTVL 225

Query:   341 FRAR----TEKSVA--SE---NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
                +    T K V    E    K +V +   K +  +C+II  +FW  HP IL+E+
Sbjct:   226 IWQKVGEVTTKEVKLPEEMQGKKMAVTRTRTKPVPLYCDIIGDAFWKEHPEILDED 281

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

MGI|MGI:1913878 Thg1l "tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 101/225 (44%), Positives = 148/225 (65%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND +AL+LM  CA  V+EE EDI  AYG SDEYSFV +  S +++R+AS+ ++++ S 
Sbjct:    73 KPNDSRALHLMTKCAQTVMEELEDIVIAYGQSDEYSFVFRKKSNWFKRRASKFMTLVASQ 132

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             F S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct:   133 FASSYVFYWRDYFEDQPLRYPPGFDGRVVLYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query:   293 LVK-SGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGS-----SIFRARTE 346
             L++ SG +  +AQ  LKGT   +KNE+L  +F I+Y+  P M+R+G+      +   RT+
Sbjct:   193 LIQQSGLTPVQAQQRLKGTLTADKNEILFSEFHINYNNEPHMYRKGTVLVWQKVEEVRTQ 252

Query:   347 K-SVASE---NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
             +  + +E    K +V +   +V+  +C++I  +FW  HP IL EE
Sbjct:   253 EVRLPAEMEGEKKAVARTRTRVVALNCDLIGDAFWKEHPEILAEE 297

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005525 "GTP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

GO:0008033 "tRNA processing" evidence=ISO

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016779 "nucleotidyltransferase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=ISO

UNIPROTKB|Q7SDM8 thg-1 "tRNA(His) guanylyltransferase" [Neurospora crassa OR74A (taxid:367110)]

 Score = 485 (175.8 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
 Identities = 93/173 (53%), Positives = 126/173 (72%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND++AL+LMN+ A +V+ E  DIT AYGVSDEYSFV   +   ++R+AS++VS IVS 
Sbjct:    44 KPNDKRALDLMNAAARSVMSELPDITIAYGVSDEYSFVFHKSCTLFERRASKLVSTIVST 103

Query:   233 FTSMYVVKWKEFFPQ-KKLNYP-PSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCF 290
             FT+ Y+  W  +F     L+ P PSFDGRAVCYPS   +RDY++WRQVDCHINN YNT F
Sbjct:   104 FTAYYIHHWPTYFVDGPPLSPPLPSFDGRAVCYPSVQNLRDYMSWRQVDCHINNLYNTTF 163

Query:   291 WMLV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFR 342
             W L+ + G   + A+  LKGT + +KNE+L +KFGI+Y+  P MF++GS +FR
Sbjct:   164 WALINQGGMDGTAAELMLKGTFSADKNEILFKKFGINYNNEPEMFKKGSVVFR 216

GO:0005737 "cytoplasm" evidence=ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0008193 "tRNA guanylyltransferase activity" evidence=ISS

UNIPROTKB|E2RA61 THG1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 102/225 (45%), Positives = 148/225 (65%)

Query:   173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
             +PND +AL+LM  CA  V++E EDI  AYG SDEYSFV K  S +++R+AS+ ++ + S 
Sbjct:    73 KPNDSRALHLMTKCAQTVMKELEDIVIAYGQSDEYSFVFKRKSNWFKRRASKFMTHVASQ 132

Query:   233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
             F S +V  W+++F  + L YPP FDGR + YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct:   133 FASSFVFYWRDYFEDQPLLYPPGFDGRVIVYPSNQTLKDYLSWRQADCHINNLYNTVFWA 192

Query:   293 LVK-SGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRAR----TEK 347
             LV+ SG + ++AQ  L+GT A +KNE+L  +F I+Y+  PLM+R+G+ +   +    T K
Sbjct:   193 LVQQSGLTPAQAQERLQGTLAADKNEILFSEFNINYNNEPLMYRKGTVLIWQKVGEVTTK 252

Query:   348 SVA--SE---NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
              V    E    K +V +   K +  +C+II  +FW  HP IL+E+
Sbjct:   253 EVKLPEEMQGKKMAVTRTRTKPVPLYCDIIGDAFWKEHPEILDED 297

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0008193 "tRNA guanylyltransferase activity" evidence=IEA

GO:0006400 "tRNA modification" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.7	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	390
pfam04446	131	pfam04446, Thg1, tRNAHis guanylyltransferase	1e-56
COG4021	249	COG4021, COG4021, Uncharacterized conserved protei	7e-55
COG4021	249	COG4021, COG4021, Uncharacterized conserved protei	4e-49
pfam14413	120	pfam14413, Thg1C, Thg1 C terminal domain	2e-43
pfam04446	131	pfam04446, Thg1, tRNAHis guanylyltransferase	6e-42
pfam14413	120	pfam14413, Thg1C, Thg1 C terminal domain	1e-10
cd08767	126	cd08767, Cdt1_c, The C-terminal fold of replicatio	0.001

>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase

 Score =  181 bits (461), Expect = 1e-56
 Identities = 68/128 (53%), Positives = 93/128 (72%)

Query: 5   KYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEE 64
           K+EYVK FE +D +     +VVRI GR F +F+  HGFEKPNDERAL+LMN  A A++EE
Sbjct: 1   KFEYVKQFEQDDRLLPNTPIVVRIDGRGFHKFTKKHGFEKPNDERALDLMNAAAKALMEE 60

Query: 65  YPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYP 124
           +PDIV +YG SDE SF+F++ +  + RR  K++S++ S F+S +V KW +FFP K  +YP
Sbjct: 61  FPDIVLAYGQSDEISFLFRKDTLLFNRRVEKLVSVVASLFSSSFVYKWGKFFPDKPLKYP 120

Query: 125 PSFHSRVI 132
           PSF  RV+
Sbjct: 121 PSFDGRVV 128

The Thg1 protein from Saccharomyces cerevisiae is responsible for adding a GMP residue to the 5' end of tRNA His. The catalytic domain Thg1 contains a RRM (ferredoxin) fold palm domain, just like the viral RNA-dependent RNA polymerases, reverse transcriptases, family A and B DNA polymerases, adenylyl cyclases, diguanylate cyclases (GGDEF domain) and the predicted polymerase of the CRISPR system. Thg1 possesses an active site with three acidic residues that chelate Mg++ cations. Thg1 catalyzes polymerization similar to the 5'-3' polymerases. Length = 131

>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown]

 Score =  181 bits (460), Expect = 7e-55
 Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 174 PNDEQALNLMNSCAVA-VLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           P DE+ L LMN+ A   VL+   DI  AY  SDE SF+LK++++ +  +  ++ SV  SF
Sbjct: 44  PYDERFLKLMNATAKNLVLKYGLDIILAYTFSDEISFLLKSSTVPFNGRVEKLDSVFASF 103

Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           FTS +   W +FFP+K     PSFD R V YP  D I DY  WRQV+   NN Y+T FW 
Sbjct: 104 FTSAFTRLWAKFFPEKH---LPSFDSRCVAYPL-DTIPDYFHWRQVEAWRNNLYSTTFWQ 159

Query: 293 LVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRART-EKSVAS 351
           L+  G +  EA+  L+GT++ EK+E+L  +FGI+Y++ P   ++G  ++R      +   
Sbjct: 160 LIIRGLTPQEAEERLRGTKSNEKHEILFSEFGINYNREPEWQKKGVGVYRVPVRGWNPIR 219

Query: 352 ENKSSVEKVWNKVLVSHCNIIEPSFWMAHP 381
           + +S V +    + ++    I+  F     
Sbjct: 220 DEESLVTRKGEILHINVIAQIDELFEGYMR 249

Length = 249

>gnl|CDD|226508 COG4021, COG4021, Uncharacterized conserved protein [Function unknown]

 Score =  166 bits (421), Expect = 4e-49
 Identities = 66/168 (39%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 2   ANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAV 61
           A SK+ YV+     D I     +V+RI GR F +F+    FEKP DER L LMN  A  +
Sbjct: 1   AKSKFMYVREVYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNL 60

Query: 62  LEEY-PDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKE 120
           + +Y  DI+ +Y +SDE SF+ K ++  +  R  K+ S+  SFFTS +   W +FFP K 
Sbjct: 61  VLKYGLDIILAYTFSDEISFLLKSSTVPFNGRVEKLDSVFASFFTSAFTRLWAKFFPEKH 120

Query: 121 FRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHG 168
               PSF SR ++   ++ +  Y  WRQ +   NN Y T  W LI  G
Sbjct: 121 ---LPSFDSRCVA-YPLDTIPDYFHWRQVEAWRNNLYSTTFWQLIIRG 164

Length = 249

>gnl|CDD|222741 pfam14413, Thg1C, Thg1 C terminal domain

 Score =  147 bits (372), Expect = 2e-43
 Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 4/121 (3%)

Query: 265 SSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFG 324
           S + +RDYL+WRQ D H NN YNT FW LVK G S  EA   LKGT + +KNELL  +FG
Sbjct: 1   SLEEVRDYLSWRQADAHRNNLYNTAFWALVKGGFSPKEATERLKGTLSSDKNELLFSEFG 60

Query: 325 IDYSKLPLMFRQGSSIFRARTEK---SVASENKSSVEKVWNKVLVSHCNIIEPSFWMAHP 381
           I+Y+  P  FR+GS ++R   EK   +  +  K  V++  +  L   C+I +  FW   P
Sbjct: 61  INYNNEPAWFRRGSLLYREEVEKEGYNPKTGEKVKVKRRRDSELPLFCDIGD-EFWEELP 119

Query: 382 S 382
            
Sbjct: 120 Y 120

Thg1 polymerases contain an additional region of conservation C-terminal to the core palm domain that comprise of 5 helices and two strands. This region has several well-conserved charged residues including a basic residue found towards the end of the first helix of this unit might contribute to the Thg1-specific active site. This C-terminal module of Thg1 is predicted to form a helical bundle that functions equivalently to the fingers of the other nucleic acid polymerases, probably in interacting with the template HtRNA. Length = 120

>gnl|CDD|203016 pfam04446, Thg1, tRNAHis guanylyltransferase

 Score =  143 bits (362), Expect = 6e-42
 Identities = 50/91 (54%), Positives = 67/91 (73%)

Query: 174 PNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFF 233
           PNDE+AL+LMN+ A A++EEF DI  AYG SDE SF+ +  ++ + R+  ++VSV+ S F
Sbjct: 41  PNDERALDLMNAAAKALMEEFPDIVLAYGQSDEISFLFRKDTLLFNRRVEKLVSVVASLF 100

Query: 234 TSMYVVKWKEFFPQKKLNYPPSFDGRAVCYP 264
           +S +V KW +FFP K L YPPSFDGR V YP
Sbjct: 101 SSSFVYKWGKFFPDKPLKYPPSFDGRVVLYP 131

The Thg1 protein from Saccharomyces cerevisiae is responsible for adding a GMP residue to the 5' end of tRNA His. The catalytic domain Thg1 contains a RRM (ferredoxin) fold palm domain, just like the viral RNA-dependent RNA polymerases, reverse transcriptases, family A and B DNA polymerases, adenylyl cyclases, diguanylate cyclases (GGDEF domain) and the predicted polymerase of the CRISPR system. Thg1 possesses an active site with three acidic residues that chelate Mg++ cations. Thg1 catalyzes polymerization similar to the 5'-3' polymerases. Length = 131

>gnl|CDD|222741 pfam14413, Thg1C, Thg1 C terminal domain

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 136 SIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENE 173
           S+E ++ YL+WRQ D H NN Y T  W L+K G S  E
Sbjct: 1   SLEEVRDYLSWRQADAHRNNLYNTAFWALVKGGFSPKE 38

Thg1 polymerases contain an additional region of conservation C-terminal to the core palm domain that comprise of 5 helices and two strands. This region has several well-conserved charged residues including a basic residue found towards the end of the first helix of this unit might contribute to the Thg1-specific active site. This C-terminal module of Thg1 is predicted to form a helical bundle that functions equivalently to the fingers of the other nucleic acid polymerases, probably in interacting with the template HtRNA. Length = 120

>gnl|CDD|176572 cd08767, Cdt1_c, The C-terminal fold of replication licensing factor Cdt1 is essential for Cdt1 activity and directly interacts with MCM2-7 helicase

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 327 YSKLPLMFRQGSSIFRARTEKSVASENKSSV--EKVWNKVLVSHCNIIEPSFWMAHPSIL 384
           Y++LP + R   +IF         SE K+ +  E++  K+  S+ +I+       H  +L
Sbjct: 40  YARLPELARILRNIFV--------SEKKTVLPLEELVYKLQASYPSILSRGEVEEHLRLL 91

Query: 385 NEEPP 389
            E  P
Sbjct: 92  AELAP 96

Cdt1 is a replication licensing factor in eukaryotes that recruits the Minichromosome Maintenance Complex (MCM2-7) to the Origin Recognition Complex (ORC). The Cdt1 protein is divided into three regions based on sequence comparison and biochemical analyses: the N-terminal region (Cdt1_n) binds DNA in a sequence-, strand-, and conformation-independent manner; the middle winged helix fold (Cdt1_m) binds geminin to inhibit both binding of the MCM complex to origins of replication and DNA; and the C-terminal region (Cdt1_c) is essential for Cdt1 activity and directly interacts with the MCM2-7 helicase. Precise duplication of chromosomal DNA is required for genomic stability during replication. Assembly of replication factors to start DNA replication in eukaryotes must occur only once per cell cycle. To form a pre-replicative complex on replication origins in the G phase, ORC first binds origin DNA and triggers the binding of Cdc6 and Cdt1. These two factors recruit a putative replicative helicase and the MCM2-7. The MCM2-7 complex promotes the unwinding of DNA origins, and the binding of additional factors to initiate the DNA replication in S-phase. Cdt1 is present during G1 and early S phase of the cell cycle and is degraded during the late S, G2, and M phases. The winged helix fold structure of Cdt1_m is similar to the structures of Cdt1_c and archaeal homologues of the eukaryotic replication initiator, without apparent sequence similarity. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	390
KOG2721	260	consensus Uncharacterized conserved protein [Funct	100.0
COG4021	249	Uncharacterized conserved protein [Function unknow	100.0
PF04446	135	Thg1: tRNAHis guanylyltransferase; InterPro: IPR00	100.0
PF14413	120	Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A	100.0
PF04446	135	Thg1: tRNAHis guanylyltransferase; InterPro: IPR00	99.97
COG4021	249	Uncharacterized conserved protein [Function unknow	99.92
KOG2721	260	consensus Uncharacterized conserved protein [Funct	99.8
PF14413	120	Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A	99.29

>KOG2721 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.1e-79  Score=566.83  Aligned_cols=253  Identities=61%  Similarity=1.061  Sum_probs=230.8

Q ss_pred             hhhhhccccCCCCCCCeEEEEEeCCCcccccccCCCCCCcHHHHHHHHHHHHHHHHHhCCCcEEEEeccceeeeeeeccc
Q 016392            7 EYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVFKRTS   86 (390)
Q Consensus         7 e~~k~~E~~~~l~p~~~~vvRlDG~~F~kft~~~~f~kP~D~r~~~am~~t~~~l~~~~~~~~~ayt~SDEis~~f~~~~   86 (390)
                      ||||+||.++.++|.++|||||||++||+|++.|.|+||+|++++++|++||+.+|+++++|.+||++|||+        
T Consensus         1 eYVksFE~~d~~lp~~~iVvRIDGr~FhrFs~~h~FeKPNDe~aLnLMnscA~~Vl~ef~DIv~AyG~SDEY--------   72 (260)
T KOG2721|consen    1 EYVKSFEVEDEVLPPCWIVVRIDGRDFHRFSKVHEFEKPNDETALNLMNSCASAVLEEFPDIVFAYGYSDEY--------   72 (260)
T ss_pred             CchhhhhcccccccceEEEEEEcCcchhhhhhhhcccCCChHHHHHHHHHHHHHHHHhccceEEEeccCcce--------
Confidence            799999999999999999999999999999999999999999999999999999999888866666666666        


Q ss_pred             cccccchhhhhHHHHhhhHHHHHhhhhhccCCCCCCCCCcceeeeeeeCCHHHHHHHHHhhhhcccccccccceeeeeee
Q 016392           87 KFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIK  166 (390)
Q Consensus        87 ~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~~~~l~~p~~FDaRvi~lp~~e~v~~Yl~wRq~da~RN~ln~~~~~~Lr~  166 (390)
                                                                                                      
T Consensus        73 --------------------------------------------------------------------------------   72 (260)
T KOG2721|consen   73 --------------------------------------------------------------------------------   72 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCchHHHHHHhHHHHHHHHhhhcceeeeecccceeeeeeeccccccccchhhhhHHHHHHHHhHhhhhhhhcCC
Q 016392          167 HGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFP  246 (390)
Q Consensus       167 eG~s~~kP~D~~~l~aM~~ta~~l~~~f~~i~~aYtqSDEIS~vf~~~~~~f~~R~~Kl~S~~aS~~Ss~f~~~~~~~fp  246 (390)
                                                               ||||++.+.+|.||.+||+|.+||+|+|+|+++|.++||
T Consensus        73 -----------------------------------------SFV~kk~t~~fkRr~sKi~s~v~SfF~s~YV~~W~~ffp  111 (260)
T KOG2721|consen   73 -----------------------------------------SFVFKKSTELFKRRASKILSLVASFFASVYVTKWKKFFP  111 (260)
T ss_pred             -----------------------------------------eeeeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence                                                     556777789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCceeecCChhhHHHHHHHhhhhhhHhhhHHHHHHHHH-HcCCChhhHhhhccCCChHHHHHHHHHHhCC
Q 016392          247 QKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGI  325 (390)
Q Consensus       247 ~~~l~~p~~FD~Rvv~~P~~~~v~dYl~WRq~d~~rN~l~n~~~w~l~-~~G~s~~eA~~~L~G~~~~~k~ElLf~~~gI  325 (390)
                      +.+|.++|+||||+|+||+.+.++|||.|||+|||+||+||||||+|| ++|+|+.||++.|+||.+++|||+||++|||
T Consensus       112 ~~~L~y~PsFdgrvV~yps~q~LkdYLaWRq~DcHinNlYnT~fWmLv~ksG~t~~qaq~~Lkgt~s~ekneilf~efgi  191 (260)
T KOG2721|consen  112 HLKLLYAPSFDGRVVSYPSVQVLKDYLAWRQVDCHINNLYNTCFWMLVKKSGKTPSQAQEILKGTFSAEKNEILFSEFGI  191 (260)
T ss_pred             CCccccCCCCCCcEEecccHHHHHHHHHHHhhcccccchhhHHHHHHHHHhCCChHHHHHHHHhhhhhhhhhHHHHHhCc
Confidence            999999999999999999999999999999999999999999999999 6999999999999999999999999999999


Q ss_pred             CCCCcccccccceEEEEeeee-cccc-----ccccccceeeeeeEEeecccCCCccccCcCCCccCCCC
Q 016392          326 DYSKLPLMFRQGSSIFRARTE-KSVA-----SENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEEP  388 (390)
Q Consensus       326 N~n~~P~~~r~Gs~i~r~~~~-~~~~-----~~~~~~~~~~R~~i~~~h~dii~~~fw~~~~~~l~~~~  388 (390)
                      |||++|+++|+||++.|+.+. +.-.     ..+...++..|.++...|++||||.||.+||.+|.+.+
T Consensus       192 nyn~~p~~~rkGs~l~rk~v~~~~~k~~~~~~~k~~~~~~~~~k~lp~~~~~i~d~f~~~~p~~~~~~~  260 (260)
T KOG2721|consen  192 NYNNEPEMFRKGSILIRKKVKGQEWKINTEIQGKKLFVTYTRTKPLPLHVDIIGDDFWKEHPEILDEDS  260 (260)
T ss_pred             ccCCchHHHhcccEEEEecCCcceeeechhcccceeeeeeccCcceeEEEEEecCcccccCchhhccCC
Confidence            999999999999999999772 1111     12234456677778889999999999999999998754

>COG4021 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.3e-70  Score=502.84  Aligned_cols=245  Identities=36%  Similarity=0.631  Sum_probs=207.1

Q ss_pred             CCCcchhhhhccccCCCCCCCeEEEEEeCCCcccccccCCCCCCcHHHHHHHHHHHHHHHHHh-CCCcEEEEeccceeee
Q 016392            2 ANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEE-YPDIVFSYGYSDEYSF   80 (390)
Q Consensus         2 ~~~~~e~~k~~E~~~~l~p~~~~vvRlDG~~F~kft~~~~f~kP~D~r~~~am~~t~~~l~~~-~~~~~~ayt~SDEis~   80 (390)
                      |+|+++|++++|....++|+++||+|||||+||+||+.|||+||||+++++||++||+.++.. +++|.++||+||||||
T Consensus         1 ~k~~~~~~~evya~~R~~P~t~iVlRiDGr~Fhk~tk~l~FeKPyD~~f~~lM~~tA~~lv~~~~~~i~LaYtfSDE~sf   80 (249)
T COG4021           1 AKSKFMYVREVYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNLVLKYGLDIILAYTFSDEISF   80 (249)
T ss_pred             CCCcchhhhhhhhhhcCCCCceEEEEecChhhhHHHhhcCcCCcchHHHHHHHHHHHHHHHHHhCCCeEEEEecccceEE
Confidence            689999999999999999999999999999999999999999999999999999999966665 7888888888888877


Q ss_pred             eeeccccccccchhhhhHHHHhhhHHHHHhhhhhccCCCCCCCCCcceeeeeeeCCHHHHHHHHHhhhhcccccccccce
Q 016392           81 VFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETC  160 (390)
Q Consensus        81 ~f~~~~~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~~~~l~~p~~FDaRvi~lp~~e~v~~Yl~wRq~da~RN~ln~~~  160 (390)
                      +++.                                                                            
T Consensus        81 l~~~----------------------------------------------------------------------------   84 (249)
T COG4021          81 LLKS----------------------------------------------------------------------------   84 (249)
T ss_pred             Eeec----------------------------------------------------------------------------
Confidence            6444                                                                            


Q ss_pred             eeeeeecCCCCCCCchHHHHHHhHHHHHHHHhhhcceeeeecccceeeeeeeccccccccchhhhhHHHHHHHHhHhhhh
Q 016392          161 LWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVK  240 (390)
Q Consensus       161 ~~~Lr~eG~s~~kP~D~~~l~aM~~ta~~l~~~f~~i~~aYtqSDEIS~vf~~~~~~f~~R~~Kl~S~~aS~~Ss~f~~~  240 (390)
                                                                           ++.+|+||++||.|+.||+|||+|+..
T Consensus        85 -----------------------------------------------------st~pF~gRveKL~Sv~~Sf~tS~f~r~  111 (249)
T COG4021          85 -----------------------------------------------------STVPFNGRVEKLDSVFASFFTSAFTRL  111 (249)
T ss_pred             -----------------------------------------------------CCccccchHHHHHHHHHHHHHHHHHHH
Confidence                                                                 445566666666666666666666666


Q ss_pred             hhhcCCCCCCCCCCCCCCceeecCChhhHHHHHHHhhhhhhHhhhHHHHHHHHHHcCCChhhHhhhccCCChHHHHHHHH
Q 016392          241 WKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLI  320 (390)
Q Consensus       241 ~~~~fp~~~l~~p~~FD~Rvv~~P~~~~v~dYl~WRq~d~~rN~l~n~~~w~l~~~G~s~~eA~~~L~G~~~~~k~ElLf  320 (390)
                      |.+++|.+   .+|+||+|+|.|| .+++.|||.|||.||||||||||+||+|+..|++++||+++|+||.+.+||||||
T Consensus       112 ~~~~~p~~---~~~sFDsR~V~~~-~~~i~dYf~wRQ~eawrN~L~s~tfW~L~~rgl~~~ea~erLrG~ks~e~heiLf  187 (249)
T COG4021         112 WAKFFPEK---HLPSFDSRCVAYP-LDTIPDYFHWRQVEAWRNNLYSTTFWQLIIRGLTPQEAEERLRGTKSNEKHEILF  187 (249)
T ss_pred             hhccCCCC---CCCcccceEEecc-hhHHHHHHHHHHHHHHHHhhhhHHHHHHHHcCCChHHHHHHhcccccchHHHHHH
Confidence            77777654   6799999999998 7899999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCcccccccceEEEEeeeeccccccccccce--eeeeeEEeecccCCCccccCcC
Q 016392          321 QKFGIDYSKLPLMFRQGSSIFRARTEKSVASENKSSVE--KVWNKVLVSHCNIIEPSFWMAH  380 (390)
Q Consensus       321 ~~~gIN~n~~P~~~r~Gs~i~r~~~~~~~~~~~~~~~~--~~R~~i~~~h~dii~~~fw~~~  380 (390)
                      ++||||||.+|+|||||+++||..+.... |...+...  +.+..+...|+-.|++.||.-.
T Consensus       188 sefGIN~~r~P~wqkkG~~~yRvp~r~w~-p~~~~es~~~r~~~~~~i~~~~~iDe~fe~~~  248 (249)
T COG4021         188 SEFGINYNREPEWQKKGVGVYRVPVRGWN-PIRDEESLVTRKGEILHINVIAQIDELFEGYM  248 (249)
T ss_pred             HHhCCCcCCChHHHhcCceEEEccccccC-CcchhHHHHHhhhheeeeecceeccchhhhhc
Confidence            99999999999999999999999843332 43333333  3334455778888999999743

>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His []

Probab=100.00  E-value=1e-46  Score=331.55  Aligned_cols=131  Identities=49%  Similarity=0.942  Sum_probs=107.4

Q ss_pred             cchhhhhccccCC--CCCCCeEEEEEeCCCcccccccCCCCCCcHHHHHHHHHHHHHHHHHhCCCcEEEEeccceeeeee
Q 016392            5 KYEYVKSFEVEDE--IFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSFVF   82 (390)
Q Consensus         5 ~~e~~k~~E~~~~--l~p~~~~vvRlDG~~F~kft~~~~f~kP~D~r~~~am~~t~~~l~~~~~~~~~ayt~SDEis~~f   82 (390)
                      ||||||.||.+..  |+|++|||||||||+|||||+.|+|+||||+|+++||++||++||++++++.+||||||||||||
T Consensus         1 k~~~vk~~E~~~~~~l~p~~~ivvRiDG~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~~~~aY~~SDEiSfvf   80 (135)
T PF04446_consen    1 KYEYVKDFEQDDDLRLLPNTPIVVRIDGRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPDIVLAYGQSDEISFVF   80 (135)
T ss_dssp             -SGGGGGG----B----TTSEEEEEEEETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSSEEEEEEETTEEEEEE
T ss_pred             CccHHHhhccccccccCCCCeEEEEEeCcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEcCCeeEEEE
Confidence            7999999998887  99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccccccccchhhhhHHHHhhhHHHHHhhhhhccCCCCCC--CCCcceeeeeeeC
Q 016392           83 KRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFR--YPPSFHSRVISCA  135 (390)
Q Consensus        83 ~~~~~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~~~~l~--~p~~FDaRvi~lp  135 (390)
                      .+..+.|+||++||+|++||++||+|+.+|.+++|+.+|.  .|++||||+|++|
T Consensus        81 ~~~~~~f~~R~~Kl~S~~aS~~ss~f~~~~~~~~~~~~l~~~~~~~FD~R~v~~P  135 (135)
T PF04446_consen   81 RKSTPLFNRRVEKLVSVVASLFSSSFSFYWSKFFPDTPLEYPHPPSFDARVVCYP  135 (135)
T ss_dssp             -TT--TTTTBHHHHHHHHHHHHHHHHHHTHHHH-SSS---S-----EEEEEEEES
T ss_pred             CCCChhhcchhhhHHHHHHHHHHHHHHHHHHHhccCCccCCCCccccCccEEeCc
Confidence            9999999999999999999999999999999999998775  5599999999997

; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.

>PF14413 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A

Probab=100.00  E-value=1.8e-44  Score=311.53  Aligned_cols=117  Identities=49%  Similarity=0.877  Sum_probs=90.3

Q ss_pred             ChhhHHHHHHHhhhhhhHhhhHHHHHHHHHHcCCChhhHhhhccCCChHHHHHHHHHHhCCCCCCcccccccceEEEEee
Q 016392          265 SSDIIRDYLAWRQVDCHINNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRAR  344 (390)
Q Consensus       265 ~~~~v~dYl~WRq~d~~rN~l~n~~~w~l~~~G~s~~eA~~~L~G~~~~~k~ElLf~~~gIN~n~~P~~~r~Gs~i~r~~  344 (390)
                      +.++|+|||+|||+|||||||||||||+||++|+|++||++.|+||+++|||||||++||||||++|+||||||+|+|+.
T Consensus         1 ~~~~v~dYl~WRQ~D~hrN~l~~~~fw~Lv~~g~s~~ea~~~L~G~~~~~knElLf~~fGINyn~~P~~~RrGs~i~r~~   80 (120)
T PF14413_consen    1 SDEEVRDYLSWRQADCHRNNLYNTCFWALVKSGFSPKEAHKRLKGTKSSDKNELLFSRFGINYNNLPAWFRRGSCIYREY   80 (120)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---HHHHHHHHTT--HHHHHHHHHHCC---GGGS-HHHHH-EEEEEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHHHHhCCChhhCcHHHcCCeEEEEec
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999954


Q ss_pred             eecccc-ccccccceeee--eeEEeecccCCCccccCcCCCcc
Q 016392          345 TEKSVA-SENKSSVEKVW--NKVLVSHCNIIEPSFWMAHPSIL  384 (390)
Q Consensus       345 ~~~~~~-~~~~~~~~~~R--~~i~~~h~dii~~~fw~~~~~~l  384 (390)
                         ++. |.+++.+++.|  ..+++.|+|||+++||++||+||
T Consensus        81 ---~~~~~~~~~~~~~~r~r~~~~~~~~d~i~~~Fw~~~~~~l  120 (120)
T PF14413_consen   81 ---EGYNPKTGEKVTVKRRRDWIIPLHSDIIGDEFWEEHPYLL  120 (120)
T ss_dssp             -------SS--SEEEEEEECEEEEEE---SSSHHHHHH-TCCC
T ss_pred             ---CCCCccccCcCcceeecccceecccCcccHHHHHhChhcC
Confidence               444 66666666555  45889999999999999999997

>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His []

Probab=99.97  E-value=2e-32  Score=241.02  Aligned_cols=112  Identities=42%  Similarity=0.783  Sum_probs=91.8

Q ss_pred             ccccccceeeeeeecCCCC---------CCCchHHHHHHhHHHHHHHHhhhcceeeeecccceeeeeeeccccccccchh
Q 016392          153 VNNQYETCLWMLIKHGKSE---------NEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQAS  223 (390)
Q Consensus       153 RN~ln~~~~~~Lr~eG~s~---------~kP~D~~~l~aM~~ta~~l~~~f~~i~~aYtqSDEIS~vf~~~~~~f~~R~~  223 (390)
                      +..|-..|+.++|.||++|         +||+|+++|++|++||.+||++++|+++||||||||||||.+++.+|+||++
T Consensus        13 ~~~l~p~~~ivvRiDG~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~~~~~aY~~SDEiSfvf~~~~~~f~~R~~   92 (135)
T PF04446_consen   13 DLRLLPNTPIVVRIDGRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFPDIVLAYGQSDEISFVFRKSTPLFNRRVE   92 (135)
T ss_dssp             B----TTSEEEEEEEETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSSSEEEEEEETTEEEEEE-TT--TTTTBHH
T ss_pred             ccccCCCCeEEEEEeCcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEcCCeeEEEECCCChhhcchhh
Confidence            3346778899999999985         6999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHhHhhhhhhhcCCCCCCCCC--CCCCCceeecC
Q 016392          224 EIVSVIVSFFTSMYVVKWKEFFPQKKLNYP--PSFDGRAVCYP  264 (390)
Q Consensus       224 Kl~S~~aS~~Ss~f~~~~~~~fp~~~l~~p--~~FD~Rvv~~P  264 (390)
                      ||+|++||+|||.|+++|.++||+++|..+  |+||||+|+||
T Consensus        93 Kl~S~~aS~~ss~f~~~~~~~~~~~~l~~~~~~~FD~R~v~~P  135 (135)
T PF04446_consen   93 KLVSVVASLFSSSFSFYWSKFFPDTPLEYPHPPSFDARVVCYP  135 (135)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHH-SSS---S-----EEEEEEEES
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCccCCCCccccCccEEeCc
Confidence            999999999999999999999999877655  99999999998

; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.

>COG4021 Uncharacterized conserved protein [Function unknown]

Probab=99.92  E-value=1.8e-26  Score=213.80  Aligned_cols=133  Identities=31%  Similarity=0.497  Sum_probs=119.7

Q ss_pred             CCCCCcHHHHHHHHHHHH---HHHHHhCCCcEEEEeccceeeeeeeccccccccchhhhhHHHHhhhHHHHHhhhhhccC
Q 016392           41 GFEKPNDERALNLMNTCA---VAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFP  117 (390)
Q Consensus        41 ~f~kP~D~r~~~am~~t~---~~l~~~~~~~~~ayt~SDEis~~f~~~~~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~  117 (390)
                      .|.+.|...+.++|.+.-   ..++++++++++..+.|++.          |+|||+||+||+||++||+|+..+.+++|
T Consensus        48 ~f~~lM~~tA~~lv~~~~~~i~LaYtfSDE~sfl~~~st~p----------F~gRveKL~Sv~~Sf~tS~f~r~~~~~~p  117 (249)
T COG4021          48 RFLKLMNATAKNLVLKYGLDIILAYTFSDEISFLLKSSTVP----------FNGRVEKLDSVFASFFTSAFTRLWAKFFP  117 (249)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEecccceEEEeecCCcc----------ccchHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            577889999998888744   46788999999999998886          89999999999999999999998877776


Q ss_pred             CCCCCCCCcceeeeeeeCCHHHHHHHHHhhhhcccccccccceeeeeeecCCCCCCCchHHHHHHhHHHHHH
Q 016392          118 LKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVA  189 (390)
Q Consensus       118 ~~~l~~p~~FDaRvi~lp~~e~v~~Yl~wRq~da~RN~ln~~~~~~Lr~eG~s~~kP~D~~~l~aM~~ta~~  189 (390)
                      .+   ++++||||+|++| .+++++||.|||.|||||+|++|.||+||..|+..+++.  .-++||++..+|
T Consensus       118 ~~---~~~sFDsR~V~~~-~~~i~dYf~wRQ~eawrN~L~s~tfW~L~~rgl~~~ea~--erLrG~ks~e~h  183 (249)
T COG4021         118 EK---HLPSFDSRCVAYP-LDTIPDYFHWRQVEAWRNNLYSTTFWQLIIRGLTPQEAE--ERLRGTKSNEKH  183 (249)
T ss_pred             CC---CCCcccceEEecc-hhHHHHHHHHHHHHHHHHhhhhHHHHHHHHcCCChHHHH--HHhcccccchHH
Confidence            54   7899999999998 999999999999999999999999999999999888665  889999998876

>KOG2721 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.80  E-value=1.7e-20  Score=174.41  Aligned_cols=132  Identities=45%  Similarity=0.839  Sum_probs=107.9

Q ss_pred             CcHHHHHHHHHHHHHHHHH--hCCCcEEEEeccceeeeeeeccccccccchhhhhHHHHhhhHHHHHhhhhhccCCCCCC
Q 016392           45 PNDERALNLMNTCAVAVLE--EYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFR  122 (390)
Q Consensus        45 P~D~r~~~am~~t~~~l~~--~~~~~~~ayt~SDEis~~f~~~~~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~~~~l~  122 (390)
                      .|...+...|.+-..-++.  .+++  +.|.        |+.++.+|.+|-.||.|.+||+++|.+...|++++|+.+|.
T Consensus        47 LMnscA~~Vl~ef~DIv~AyG~SDE--YSFV--------~kk~t~~fkRr~sKi~s~v~SfF~s~YV~~W~~ffp~~~L~  116 (260)
T KOG2721|consen   47 LMNSCASAVLEEFPDIVFAYGYSDE--YSFV--------FKKSTELFKRRASKILSLVASFFASVYVTKWKKFFPHLKLL  116 (260)
T ss_pred             HHHHHHHHHHHhccceEEEeccCcc--eeee--------eccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence            4566666666654433333  3565  3333        35667789999999999999999999999999999999999


Q ss_pred             CCCcceeeeeeeCCHHHHHHHHHhhhhcccccccccceeeeeee-cCCCCCCCchHHHHHHhHHHHH
Q 016392          123 YPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLIK-HGKSENEPNDEQALNLMNSCAV  188 (390)
Q Consensus       123 ~p~~FDaRvi~lp~~e~v~~Yl~wRq~da~RN~ln~~~~~~Lr~-eG~s~~kP~D~~~l~aM~~ta~  188 (390)
                      .|++||+||+..|+.+...+||.|||.|||.|+++++|||+|++ .|++...+-  ..+++-..+.+
T Consensus       117 y~PsFdgrvV~yps~q~LkdYLaWRq~DcHinNlYnT~fWmLv~ksG~t~~qaq--~~Lkgt~s~ek  181 (260)
T KOG2721|consen  117 YAPSFDGRVVSYPSVQVLKDYLAWRQVDCHINNLYNTCFWMLVKKSGKTPSQAQ--EILKGTFSAEK  181 (260)
T ss_pred             cCCCCCCcEEecccHHHHHHHHHHHhhcccccchhhHHHHHHHHHhCCChHHHH--HHHHhhhhhhh
Confidence            99999999999999999999999999999999999999999999 788776443  56666665553

>PF14413 Thg1C: Thg1 C terminal domain; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A

Probab=99.29  E-value=1.2e-13  Score=119.89  Aligned_cols=52  Identities=44%  Similarity=0.804  Sum_probs=43.3

Q ss_pred             CHHHHHHHHHhhhhcccccccccceeeeeeecCCCCCCCchHHHHHHhHHHHHH
Q 016392          136 SIEVLQQYLAWRQNDCHVNNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVA  189 (390)
Q Consensus       136 ~~e~v~~Yl~wRq~da~RN~ln~~~~~~Lr~eG~s~~kP~D~~~l~aM~~ta~~  189 (390)
                      |.++|.+||.|||+|||||+|++||||+|+.+|.+.+++.  ..|++|.++.++
T Consensus         1 ~~~~v~dYl~WRQ~D~hrN~l~~~~fw~Lv~~g~s~~ea~--~~L~G~~~~~kn   52 (120)
T PF14413_consen    1 SDEEVRDYLSWRQADCHRNNLYNTCFWALVKSGFSPKEAH--KRLKGTKSSDKN   52 (120)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---HHHHH--HHHTT--HHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHHcCCCHHHHH
Confidence            4689999999999999999999999999999999998877  889999999866

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	390
3otb_A	269	Crystal Structure Of Human Trnahis Guanylyltransfer		1e-54

>pdb|3OTB|A Chain A, Crystal Structure Of Human Trnahis Guanylyltransferase (Thg1) - Dgtp Complex Length = 269

Iteration: 1
 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 101/225 (44%), Positives = 145/225 (64%), Gaps = 10/225 (4%)
Query: 173 EPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSF 232
           +PND +AL LM  CA  V+EE EDI  AYG SDEYSFV K  + +++R+AS+ ++ + S 
Sbjct: 44  KPNDSRALQLMTKCAQTVMEELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQ 103
Query: 233 FTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWM 292
           F S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW 
Sbjct: 104 FASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWA 163
Query: 293 LV-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVAS 351
           L+ +SG +  +AQG L+GT A +KNE+L  +F I+Y+    M+R+G+ +   + ++ +  
Sbjct: 164 LIQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTK 223
Query: 352 ENKSSVEKVWNKVLVS---------HCNIIEPSFWMAHPSILNEE 387
           E K   E    K+ V+         HC+II  +FW  HP IL+E+
Sbjct: 224 EIKLPTEMEGKKMAVTRTRTKPVPLHCDIIGDAFWKEHPEILDED 268

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	390
3otd_A	269	TRNA(His) guanylyltransferase; polymerase-like PAL	3e-82
3otd_A	269	TRNA(His) guanylyltransferase; polymerase-like PAL	3e-72
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06

>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269

 Score =  251 bits (642), Expect = 3e-82
 Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 10/224 (4%)

Query: 174 PNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFF 233
           PND +AL LM  CA  V+EE EDI  AYG SDEYSFV K  + +++R+AS+ ++ + S F
Sbjct: 45  PNDSRALQLMTKCAQTVMEELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQF 104

Query: 234 TSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWML 293
            S YV  W+++F  + L YPP FDGR V YPS+  ++DYL+WRQ DCHINN YNT FW L
Sbjct: 105 ASSYVFYWRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWAL 164

Query: 294 V-KSGKSKSEAQGCLKGTQAREKNELLIQKFGIDYSKLPLMFRQGSSIFRARTEKSVASE 352
           + +SG +  +AQG L+GT A +KNE+L  +F I+Y+    M+R+G+ +   + ++ +  E
Sbjct: 165 IQQSGLTPVQAQGRLQGTLAADKNEILFSEFNINYNNELPMYRKGTVLIWQKVDEVMTKE 224

Query: 353 ---------NKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE 387
                     K +V +   K +  HC+II  +FW  HP IL+E+
Sbjct: 225 IKLPTEMEGKKMAVTRTRTKPVPLHCDIIGDAFWKEHPEILDED 268

>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A Length = 269

 Score =  226 bits (576), Expect = 3e-72
 Identities = 85/178 (47%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 1   MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVA 60
           MA SK+EYV+ FE +D   +   +VVR+ GR+F RF+  H F KPND RAL LM  CA  
Sbjct: 1   MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQT 60

Query: 61  VLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKE 120
           V+EE  DIV +YG SDEYSFVFKR + +++RRASK ++ + S F S YV  W+++F  + 
Sbjct: 61  VMEELEDIVIAYGQSDEYSFVFKRKTNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQP 120

Query: 121 FRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLI-KHGKSENEPNDE 177
             YPP F  RV+   S + L+ YL+WRQ DCH+NN Y T  W LI + G +  +    
Sbjct: 121 LLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGR 178

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 6e-06
 Identities = 53/419 (12%), Positives = 115/419 (27%), Gaps = 104/419 (24%)

Query: 1   MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQR--FSH---DHGFEKPNDERALNLMN 55
               +Y+Y     V ++ F  N     +  +D  +   S    DH     +       + 
Sbjct: 11  TGEHQYQYKDILSVFEDAFVDNFDCKDV--QDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68

Query: 56  TCAVAVLEEYP-DIVFSY---GYSDEYSFVFKRTSKFYQRRASKILSLI---------VS 102
                 L     ++V  +        Y F+        ++ +      I           
Sbjct: 69  WT----LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 103 FFTSVYVTKWKEFFPLKEFRYPPSFHSRVI---------SCASIEVLQQYLAWRQNDCHV 153
            F    V++ + +  L++          V+         +  +++V   Y    + D  +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 154 NNQYETCLWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKN 213
                   W+ +K+  S      E  L ++                 Y +   ++    +
Sbjct: 185 -------FWLNLKNCNS-----PETVLEMLQ-------------KLLYQIDPNWTSRSDH 219

Query: 214 ASMFYQRQASEIVSVIVSFFTSMYVVKWKEFFPQKKLNYPPSFDGRAVCYPSS----DII 269
           +S    R  S    +             +     K              Y +       +
Sbjct: 220 SSNIKLRIHSIQAEL-------------RRLLKSKP-------------YENCLLVLLNV 253

Query: 270 RDYLAWRQVD--CHI----NNQYNTCFWMLVKSGKSKSEAQGCLKGTQAREKNELLIQKF 323
           ++  AW   +  C I      +  T F  L  +  +              E   LL++  
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDF--LSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311

Query: 324 GIDYSKLPLMFRQGS----SIFRARTEKSVA-SEN--KSSVEKVWNKVLVSHCNIIEPS 375
                 LP      +    SI        +A  +N    + +K+   ++ S  N++EP+
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL-TTIIESSLNVLEPA 369

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	390
3otd_A	269	TRNA(His) guanylyltransferase; polymerase-like PAL	100.0
3otd_A	269	TRNA(His) guanylyltransferase; polymerase-like PAL	99.95

>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A

Probab=100.00  E-value=2.5e-95  Score=696.14  Aligned_cols=258  Identities=47%  Similarity=0.906  Sum_probs=227.0

Q ss_pred             CCCCcchhhhhccccCCCCCCCeEEEEEeCCCcccccccCCCCCCcHHHHHHHHHHHHHHHHHhCCCcEEEEeccceeee
Q 016392            1 MANSKYEYVKSFEVEDEIFSPNLLVVRIHGRDFQRFSHDHGFEKPNDERALNLMNTCAVAVLEEYPDIVFSYGYSDEYSF   80 (390)
Q Consensus         1 ~~~~~~e~~k~~E~~~~l~p~~~~vvRlDG~~F~kft~~~~f~kP~D~r~~~am~~t~~~l~~~~~~~~~ayt~SDEis~   80 (390)
                      ||||||||||.||.++.|+|++|||||||||+|||||+.|+|+||||+|+++||++||+.||+.+++|.+||||||||||
T Consensus         1 ma~sk~eyvr~fE~~d~llp~~~iVVRiDGr~F~kfs~~~~F~KPnD~r~l~lM~~aA~~lm~~~~~i~~aYg~SDEiSf   80 (269)
T 3otd_A            1 MAKSKFEYVRDFEADDTCLAHCWVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVIAYGQSDEYSF   80 (269)
T ss_dssp             --CCSSGGGGGGCCCCBCCTTSEEEEEEEETTHHHHHHHTTCCSSCCHHHHHHHHHHHHHHHHHSSSEEEEEEETTEEEE
T ss_pred             CCCccchhhhhhccccccCCCCeEEEEEeCCccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999887888888777766


Q ss_pred             eeeccccccccchhhhhHHHHhhhHHHHHhhhhhccCCCCCCCCCcceeeeeeeCCHHHHHHHHHhhhhcccccccccce
Q 016392           81 VFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLKEFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETC  160 (390)
Q Consensus        81 ~f~~~~~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~~~~l~~p~~FDaRvi~lp~~e~v~~Yl~wRq~da~RN~ln~~~  160 (390)
                      |                                                                               
T Consensus        81 v-------------------------------------------------------------------------------   81 (269)
T 3otd_A           81 V-------------------------------------------------------------------------------   81 (269)
T ss_dssp             E-------------------------------------------------------------------------------
T ss_pred             E-------------------------------------------------------------------------------
Confidence            5                                                                               


Q ss_pred             eeeeeecCCCCCCCchHHHHHHhHHHHHHHHhhhcceeeeecccceeeeeeeccccccccchhhhhHHHHHHHHhHhhhh
Q 016392          161 LWMLIKHGKSENEPNDEQALNLMNSCAVAVLEEFEDITFAYGVSDEYSFVLKNASMFYQRQASEIVSVIVSFFTSMYVVK  240 (390)
Q Consensus       161 ~~~Lr~eG~s~~kP~D~~~l~aM~~ta~~l~~~f~~i~~aYtqSDEIS~vf~~~~~~f~~R~~Kl~S~~aS~~Ss~f~~~  240 (390)
                                                                        |.+.+.+|+||++||+|++||+|||.|+++
T Consensus        82 --------------------------------------------------f~~~~~~f~rR~~KL~S~~aS~fSs~y~~~  111 (269)
T 3otd_A           82 --------------------------------------------------FKRKTNWFKRRASKFMTHVASQFASSYVFY  111 (269)
T ss_dssp             --------------------------------------------------ECTTCCTTTTBHHHHHHHHHHHHHHHHHHT
T ss_pred             --------------------------------------------------ECCCChhhcchhHHHHHHHHHHHHHHHHHH
Confidence                                                              555667889999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCCceeecCChhhHHHHHHHhhhhhhHhhhHHHHHHHHH-HcCCChhhHhhhccCCChHHHHHHH
Q 016392          241 WKEFFPQKKLNYPPSFDGRAVCYPSSDIIRDYLAWRQVDCHINNQYNTCFWMLV-KSGKSKSEAQGCLKGTQAREKNELL  319 (390)
Q Consensus       241 ~~~~fp~~~l~~p~~FD~Rvv~~P~~~~v~dYl~WRq~d~~rN~l~n~~~w~l~-~~G~s~~eA~~~L~G~~~~~k~ElL  319 (390)
                      |+++||+++|.+||+||||+|+||+.++++|||+|||+|||||||||||||+|| ++|+|++||+++|+||.++||||||
T Consensus       112 w~~~fp~~~L~~pp~FD~Rvv~~P~~~~v~dYl~WRQ~D~h~Nnlynt~fw~Lv~~~G~s~~eA~~~L~Gt~s~dknEiL  191 (269)
T 3otd_A          112 WRDYFEDQPLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQGRLQGTLAADKNEIL  191 (269)
T ss_dssp             HHHHCSSSCCCSCCCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTCCHHHHHHHH
T ss_pred             HHHhCCCccccCCCCCceeEEeCCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCHHHHHHHHcCCcHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999 8999999999999999999999999


Q ss_pred             HHHhCCCCCCcccccccceEEEEeeeecccc---------ccccccceeeeeeEEeecccCCCccccCcCCCccCCC
Q 016392          320 IQKFGIDYSKLPLMFRQGSSIFRARTEKSVA---------SENKSSVEKVWNKVLVSHCNIIEPSFWMAHPSILNEE  387 (390)
Q Consensus       320 f~~~gIN~n~~P~~~r~Gs~i~r~~~~~~~~---------~~~~~~~~~~R~~i~~~h~dii~~~fw~~~~~~l~~~  387 (390)
                      |++||||||++|+||||||+|+|+.++....         .+.+.++++.|++|+++|+|||+|+||++|||||.++
T Consensus       192 f~~fGINyn~~P~~~rkGs~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~dii~d~fw~~~~~~l~~~  268 (269)
T 3otd_A          192 FSEFNINYNNELPMYRKGTVLIWQKVDEVMTKEIKLPTEMEGKKMAVTRTRTKPVPLHCDIIGDAFWKEHPEILDED  268 (269)
T ss_dssp             HHHHCCCGGGSCHHHHHCEEEEEC---------------------------CCEEEECCCCSSHHHHHHCTHHHHSC
T ss_pred             HHHcCCChhhCcHhHcceEEEEEeeeecccccccccccccccccccccccccceeEEecCCcCchhhhhCchhccCC
Confidence            9999999999999999999999998775432         1234556777788999999999999999999999865

>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A

Probab=99.95  E-value=3e-29  Score=240.15  Aligned_cols=141  Identities=30%  Similarity=0.598  Sum_probs=124.1

Q ss_pred             CCCCcHHHHHHHHHHHH--HHHHHhCCCcEEEEeccceeeeeeeccccccccchhhhhHHHHhhhHHHHHhhhhhccCCC
Q 016392           42 FEKPNDERALNLMNTCA--VAVLEEYPDIVFSYGYSDEYSFVFKRTSKFYQRRASKILSLIVSFFTSVYVTKWKEFFPLK  119 (390)
Q Consensus        42 f~kP~D~r~~~am~~t~--~~l~~~~~~~~~ayt~SDEis~~f~~~~~~f~gRv~KL~Sv~aS~~Ss~f~~~l~~~~~~~  119 (390)
                      +-+.|...+..+|.+-.  ...+++++++++.|..+          ..+|+||++||+|++||++||+|+.+|++++|+.
T Consensus        50 ~l~lM~~aA~~lm~~~~~i~~aYg~SDEiSfvf~~~----------~~~f~rR~~KL~S~~aS~fSs~y~~~w~~~fp~~  119 (269)
T 3otd_A           50 ALQLMTKCAQTVMEELEDIVIAYGQSDEYSFVFKRK----------TNWFKRRASKFMTHVASQFASSYVFYWRDYFEDQ  119 (269)
T ss_dssp             HHHHHHHHHHHHHHHSSSEEEEEEETTEEEEEECTT----------CCTTTTBHHHHHHHHHHHHHHHHHHTHHHHCSSS
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEEecCcEEEEEECCC----------ChhhcchhHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            45578888888888622  44566899999999873          4579999999999999999999999999999999


Q ss_pred             CCCCCCcceeeeeeeCCHHHHHHHHHhhhhcccccccccceeeeee-ecCCCCCCCchHHHHHHhHHHHHH--HHhhh
Q 016392          120 EFRYPPSFHSRVISCASIEVLQQYLAWRQNDCHVNNQYETCLWMLI-KHGKSENEPNDEQALNLMNSCAVA--VLEEF  194 (390)
Q Consensus       120 ~l~~p~~FDaRvi~lp~~e~v~~Yl~wRq~da~RN~ln~~~~~~Lr-~eG~s~~kP~D~~~l~aM~~ta~~--l~~~f  194 (390)
                      +|+.|++||||||++|+.+++.+||.|||.|||||+|+|||||+|+ ++|++.+++.  ..|+++.++.++  |+++|
T Consensus       120 ~L~~pp~FD~Rvv~~P~~~~v~dYl~WRQ~D~h~Nnlynt~fw~Lv~~~G~s~~eA~--~~L~Gt~s~dknEiLf~~f  195 (269)
T 3otd_A          120 PLLYPPGFDGRVVVYPSNQTLKDYLSWRQADCHINNLYNTVFWALIQQSGLTPVQAQ--GRLQGTLAADKNEILFSEF  195 (269)
T ss_dssp             CCCSCCCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHH--HHHTTCCHHHHHHHHHHHH
T ss_pred             cccCCCCCceeEEeCCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCHHHHH--HHHcCCcHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999999999 6899987664  889999998865  44443

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00