Citrus Sinensis ID: 016521

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MKMVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLPKSKLSKENGEKHDGYGDESV
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcHHHHHHHHccccHEEEEcccccccHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEEEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MKMVYSREILNFLVKKDVRKILkrkdsdagERGKALEELQASLFnrfrspdgakrqeqrlcgpiaslTFNFVVAVSIIFMNKWVLknigfqfpIFLSFIHYAVSWALMAVLNAFallpasppaksgllsLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKttpitllflgslipcldppgvlsfnwNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGnyyifganpgttsiCGAFVAIVGMSFYTYLNLCnskhqsskaslqngsslpksklskengekhdgygdesv
Flexible Loop (DISEMBL)
mkmvysreilnflvkkdvrkilkrkdsdagergkALEELQASLfnrfrspdgakRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSskaslqngsslpksklskengekhdgygdesv
Low Complexity Region (SEG)
MKMVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLPKSKLSKENGEKHDGYGDESV
Disordered region (IsUnstruct)
****YSREILNFLVKKDVRKIL************************************RLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCN*************************************
Disordered Region (DISOPRED)
**************************************************************PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT*******************************************
Disordered Region (DISEMBL)
MKMVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK***********************************
Disordered Region (DISPRO)
*KMVYSREILNFLVKKDVRKILKRKDS*****GK*LEELQASLFNRFRSPDGAKRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCN*************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLPKSKLSKENGEKHDGYGDESV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q8RXL8	357	Uncharacterized membrane	no	no	0.737	0.801	0.310	5e-32
Q1JQ66	313	Solute carrier family 35	yes	no	0.742	0.920	0.291	1e-27
Q6PGC7	313	Solute carrier family 35	yes	no	0.739	0.916	0.289	3e-25
A4IFK2	313	Solute carrier family 35	yes	no	0.739	0.916	0.282	4e-25
Q7Z769	313	Solute carrier family 35	yes	no	0.737	0.913	0.279	9e-24
Q9C521	336	UDP-galactose transporter	no	no	0.770	0.889	0.260	7e-20
Q9SRE4	347	UDP-galactose transporter	no	no	0.845	0.945	0.281	1e-18
Q9SFE9	341	GDP-mannose transporter G	no	no	0.713	0.812	0.247	4e-18
Q9C8M1	332	Probable sugar phosphate/	no	no	0.744	0.870	0.266	5e-11
Q5XF09	308	Probable sugar phosphate/	no	no	0.672	0.847	0.259	9e-10

>sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1

 Score =  139 bits (349), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 81  NKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPASPPAKSGLLSLFTLGFVM 137
           NK ++  +GF F   L+  H  V++  + V   +  F   P  P A  G       G + 
Sbjct: 29  NKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKMFEHKPFDPRAVMGF------GILN 82

Query: 138 SFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA 197
             S GL N+SL +NSVGFYQM K+A+ P  VL E + +RK+ S     +LT + +GV +A
Sbjct: 83  GISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKKFSRKIQFSLTILLLGVGIA 142

Query: 198 TVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTP---ITLLFLGS 254
           TVTDLQ ++ G+ ++L  +V + V +I+ + +Q++   ++  L++++ P   ITL   G 
Sbjct: 143 TVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAITLFVTGP 202

Query: 255 LIP-CLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCI 313
            +   L    V +F +       I++S  +   + +S  L +G TS +++ VLG  KTC+
Sbjct: 203 FLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCL 262

Query: 314 ILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLPKSKLS 373
           +L   Y +        +I G  VA++GM  Y+Y     ++ ++S+ S Q    LP+ K S
Sbjct: 263 VLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYYCSIETQQKASETSTQ----LPQMKES 318

Query: 374 KEN 376
           +++
Sbjct: 319 EKD 321

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 160/305 (52%), Gaps = 17/305 (5%)

Query: 64  IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPAS 120
           IA L  N + ++ I+F+NKW+  + GF   + L+ IH+ ++W  + +   ++ FA  P S
Sbjct: 15  IAGLLVNLLSSICIVFINKWIYVHYGFP-NMTLTLIHFVMTWLGLFICQKMDIFA--PKS 71

Query: 121 -PPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRV 179
             P+K  LL+L   GFV+       N+SL+ N++G YQ+AK+  TP I+  + + YRK  
Sbjct: 72  LRPSKILLLALSFCGFVV-----FTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTF 126

Query: 180 SVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTAL 238
           S    +TL  +++GV + +  D++F+L G   A   ++ +++ ++ W   +Q E    ++
Sbjct: 127 STKIKLTLVPITLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQV-WVGAKQHELQVNSM 185

Query: 239 ALMWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL 295
            L++   P++  FL  L+P  +P    G +   W+F     +L+S  + FL+  S    +
Sbjct: 186 QLLYYQAPMSSAFLLVLVPFFEPLTGDGGIFGPWSFLALFMVLLSGVIAFLVNLSIYWII 245

Query: 296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQ 355
           G TS +++ + G FK CI LLG Y +F          G    + G+  YT+  L   +  
Sbjct: 246 GNTSPVTYNMFGHFKFCITLLGGYVLFQDPLSLNQGLGILCTLTGILAYTHFKLAEQEEG 305

Query: 356 SSKAS 360
            S+ +
Sbjct: 306 KSRLT 310

Putative transporter.

Danio rerio (taxid: 7955)

>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 153/304 (50%), Gaps = 17/304 (5%)

Query: 65  ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPASP 121
           A L FN +V++ I+F+NKW+  + GF   + L+ +H+ V+W  + +   LN FA      
Sbjct: 16  AGLLFNLLVSICIVFLNKWIYVHHGFP-NMSLTLVHFVVTWLGLYICQKLNIFAPKSLPL 74

Query: 122 PAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSV 181
                L   F  GFV+       N+SL+ N++G YQ+AK   TP I+  +   Y+KR SV
Sbjct: 75  SKLLLLALSFC-GFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFSV 128

Query: 182 LKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALAL 240
              +TL  +++GV + +  D++F   G   A   +V +++ ++ W   +Q E    ++ L
Sbjct: 129 RIQLTLIPITVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQV-WVGAKQHELQVNSMQL 187

Query: 241 MWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGA 297
           ++   P++   L   +P  +P    G +   W+ S  L +L+S  + F++  S    +G 
Sbjct: 188 LYYQAPMSSAMLLVAVPFFEPVFAEGGIFGPWSVSALLMVLLSGIIAFMVNLSIYWIIGN 247

Query: 298 TSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSS 357
           TS +++ + G FK CI L G Y +F          G    + G+  YT+  L  S+ + S
Sbjct: 248 TSPVTYNMFGHFKFCITLCGGYILFKDPLSVNQGLGILCTLFGILTYTHFKL--SEQEGS 305

Query: 358 KASL 361
           K+ L
Sbjct: 306 KSKL 309

Putative transporter.

Mus musculus (taxid: 10090)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 155/304 (50%), Gaps = 17/304 (5%)

Query: 65  ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPASP 121
           A L  N +V++ I+F+NKW+  + GF   + L+ +H+ V+W  + V   L+ FA     P
Sbjct: 16  AGLLLNLLVSICIVFLNKWIYVHYGFP-NMSLTLVHFVVTWLGLYVCQKLDIFAPKSLPP 74

Query: 122 PAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSV 181
                L   F  GFV+       N+SL+ N++G YQ+AK   TP I++ + +CY+K  S 
Sbjct: 75  SKLLLLALSFC-GFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFST 128

Query: 182 LKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALAL 240
              +TL  +++GV + +  D++F+  G   A   ++ +++ ++ W   +Q E    ++ L
Sbjct: 129 KIRLTLIPITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQV-WVGAKQHELQVNSMQL 187

Query: 241 MWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGA 297
           ++   P++   L   +P  +P    G +   W+ S  L +L+S  + F++  S    +G 
Sbjct: 188 LYYQAPMSSAMLLVAVPFFEPVFAEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIGN 247

Query: 298 TSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSS 357
           TS +++ + G FK CI L G Y +F          G    + G+  YT+  L  S+ + S
Sbjct: 248 TSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHFKL--SEQEGS 305

Query: 358 KASL 361
           K+ L
Sbjct: 306 KSKL 309

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score =  111 bits (277), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 149/301 (49%), Gaps = 15/301 (4%)

Query: 65  ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPASP 121
           A L FN +V++ I+F+NKW+    GF   + L+ +H+ V+W  + +   L+ FA     P
Sbjct: 16  AGLLFNLLVSICIVFLNKWIYVYHGFP-NMSLTLVHFVVTWLGLYICQKLDIFAPKSLPP 74

Query: 122 PAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSV 181
                L   F  GFV+       N+SL+ N++G YQ+AK   TP I+  +  CY+K  S 
Sbjct: 75  SRLLLLALSFC-GFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFST 128

Query: 182 LKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALAL 240
              +TL  +++GV + +  D++F+  G   A   ++ +++ ++ W   +Q E    ++ L
Sbjct: 129 RIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQV-WVGAKQHELQVNSMQL 187

Query: 241 MWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGA 297
           ++   P++   L   +P  +P    G +   W+ S  L +L+S  + F++  S    +G 
Sbjct: 188 LYYQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIGN 247

Query: 298 TSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSS 357
           TS +++ + G FK CI L G Y +F          G    + G+  YT+  L   +   S
Sbjct: 248 TSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKLSEQEGSRS 307

Query: 358 K 358
           K
Sbjct: 308 K 308

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 24/323 (7%)

Query: 75  VSIIFMNKWVLKNIGFQFPIFLSFIHYAVS----WALMAVLNAFALLPASPPAKSGLLSL 130
           V++I MNKW+ + + F+FP+ +S +H+  S    + ++ VL    L+   P  +     +
Sbjct: 21  VTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVDPEDR--WRRI 78

Query: 131 FTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAV 190
           F + FV   +  L NVSL+Y  V F Q  K     + V+ +++ +RK        +L  +
Sbjct: 79  FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPI 138

Query: 191 SIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLL 250
             G+ + +VT+L F++FG C AL   + ++   IL  +L     + ++  ++   P   +
Sbjct: 139 VGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATM 198

Query: 251 FLGSLIPCLDPPGVLSFNW------NFSNTLAILMSAFLGFLLQWSGALALGATSAISHV 304
            LG     L+  G+LS  W       +S  + IL S  L F L +S    + +T+A++  
Sbjct: 199 ILGIPALLLEGSGILS--WFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFN 256

Query: 305 VLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKAS--LQ 362
           V G  K  + ++ ++ IF       +  G  + +VG +FY Y+     +H  S+ +    
Sbjct: 257 VAGNLKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYV-----RHMLSQQTPGTP 311

Query: 363 NGSSLPKSK---LSKENGEKHDG 382
                P+SK   L   N +K +G
Sbjct: 312 RTPRTPRSKMELLPLVNNDKLEG 334

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 13/341 (3%)

Query: 48  RSPDGAKRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKN--IGFQFPIFLSFIHYAVSW 105
             P+  K+      G  A    N + +V II  NK ++ +   GF F   L+  H+A + 
Sbjct: 2   EKPESEKKSAVSDVGAWA---MNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTA 58

Query: 106 ALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTP 165
            +  V NA  L   S      L  L     V + S    N SL  NSVGFYQ++K+++ P
Sbjct: 59  LVGMVSNATGL---SASKHVPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIP 115

Query: 166 SIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKIL 225
            + + E+I + K        ++  V IGV + TVTD++ +  G   A   +  +++ +I 
Sbjct: 116 VVCVLEWILHSKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQIS 175

Query: 226 WSNLQQRESWTALALMWKTTP---ITLLFLGSLIPCLDPPGVLS-FNWNFSNTLAILMSA 281
             +LQ++ S  +  L+ KT P   I+LL  G  +  L     +S +   +     IL+S 
Sbjct: 176 IGSLQKKYSVGSFELLSKTAPIQAISLLICGPFVDYLLSGKFISTYQMTYGAIFCILLSC 235

Query: 282 FLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGM 341
            L      S  L +G  SA S  VLG  KT  +L   + +F +     +I G  +AIVGM
Sbjct: 236 ALAVFCNISQYLCIGRFSATSFQVLGHMKTVCVLTLGWLLFDSEMTFKNIAGMAIAIVGM 295

Query: 342 SFYTY-LNLCNSKHQSSKASLQNGSSLPKSKLSKENGEKHD 381
             Y++ +++   ++  S    ++  +  + KL KE  E  D
Sbjct: 296 VIYSWAVDIEKQRNAKSTPHGKHSMTEDEIKLLKEGVEHID 336

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 139/291 (47%), Gaps = 14/291 (4%)

Query: 75  VSIIFMNKWVLKNIGFQFPIFLSFIHYAVS----WALMAVLNAFALLPASPPAKSGLLSL 130
           V++I MNKW+ + + F+FP+ +S +H+  S    + ++ VL    L+   P  +     +
Sbjct: 27  VTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVDPEDRWR--RI 84

Query: 131 FTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAV 190
           F + FV   +  L N+SL+Y  V F Q  K     + V+ +++ +RK        +L  +
Sbjct: 85  FPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIWASLVPI 144

Query: 191 SIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLL 250
             G+ + ++T+L F++FG C AL   + ++   IL  +L     + ++  ++   P   +
Sbjct: 145 VGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATM 204

Query: 251 FLGSLIPCLDPPGVLSFNW------NFSNTLAILMSAFLGFLLQWSGALALGATSAISHV 304
            LG     L+  G+L  +W       +S  + +  S  L F L +S    + +T+A++  
Sbjct: 205 ILGLPAFLLERNGIL--DWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFN 262

Query: 305 VLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQ 355
           V G  K  + +  ++ IF       +  G  + +VG +FY Y+    S+ Q
Sbjct: 263 VAGNLKVAVAVFVSWMIFRNPISPMNAVGCGITLVGCTFYGYVRHMLSQQQ 313

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2

 Score = 69.3 bits (168), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 26/315 (8%)

Query: 78  IFMNKWVL--KNIGFQFPIFLSFIHYAVSWALMAVLN-AFALLPASP--PAKSGLLSLFT 132
           IF NKWVL  K I F +P+ L+ +H   S  L  +L   F ++        +  + S+  
Sbjct: 32  IFFNKWVLSSKEINFPYPLGLTLLHMTFSSVLCFLLTKVFKVMKVEEGMTLEIYVTSVIP 91

Query: 133 LGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLK-VITLTAVS 191
           +G + + +  L N +  Y +V F QM K A+ P  V    +C    +   K ++ ++ +S
Sbjct: 92  IGAMFAMTLWLGNTAYLYITVAFSQMLK-AIMPVAVFILGVCVGLEIMSCKMLLIMSVIS 150

Query: 192 IGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE--SWTALALMWKTTPITL 249
            GV V++  +L  +  G    +  IV  A+  IL   L +R+      L+LM+  +P + 
Sbjct: 151 FGVLVSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKGIKLNPLSLMYYMSPCSA 210

Query: 250 LFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQF 309
           + L   IP +         WNF + L + +++   F L  S  L +  TSA++  + G  
Sbjct: 211 ICL--FIPWIFLEKSKMDTWNF-HVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVV 267

Query: 310 KTCIILLGNYYIFGANPGT-TSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLP 368
           K  +++L +  +F     T  ++ G  VAIVG++ Y       + H+      +NG S+ 
Sbjct: 268 KDWLVVLVSALLFAETKLTIINLFGYAVAIVGVATY-------NNHKP-----KNGESIT 315

Query: 369 KSKLSKENGEKH-DG 382
               S +N +K  DG
Sbjct: 316 LVSQSPKNSDKKPDG 330

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 28/289 (9%)

Query: 75  VSIIFMNKWVLKNIGFQFPIFLSFIHY---------AVSWALMAVLNAFALLPASPPAKS 125
           + ++ +NK++L N GF++PIFL+  H          A++W  M  +        +  ++ 
Sbjct: 23  IGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPMQ-------TIRSRV 75

Query: 126 GLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTP--SIVLAEFICYRKRVSVLK 183
             L +  L  V   S    N+SL++  V F Q A  A TP  + V A  I + KR + L 
Sbjct: 76  QFLKIAALSLVFCVSVVFGNISLRFLPVSFNQ-AIGATTPFFTAVFAYLITF-KREAWLT 133

Query: 184 VITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNL--QQRESWTALALM 241
             TL  V  GV +A+ ++  F LFG  + +A     A+  +L   L   + E   ++ L+
Sbjct: 134 YFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKLNSMNLL 193

Query: 242 WKTTPITLLFL--GSLIPCLDPPGV---LSFNWNFSNTLAILMSAFLGFLLQWSGALALG 296
               PI ++FL   +LI   +  G+   L+ + +F     +L ++ L + +  +  L   
Sbjct: 194 LYMAPIAVVFLLPATLIMEKNVVGITIALARD-DFRIVWYLLFNSALAYFVNLTNFLVTK 252

Query: 297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT 345
            TSA++  VLG  K  + ++ +  IF      T + G  + + G+  Y+
Sbjct: 253 HTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYS 301

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
255573545	385	organic anion transporter, putative [Ric	0.992	1.0	0.782	1e-174
356556268	379	PREDICTED: uncharacterized membrane prot	0.971	0.994	0.735	1e-163
225445968	388	PREDICTED: uncharacterized membrane prot	0.994	0.994	0.724	1e-162
297735438	382	unnamed protein product [Vitis vinifera]	0.979	0.994	0.727	1e-160
449457211	379	PREDICTED: uncharacterized membrane prot	0.966	0.989	0.745	1e-160
356530352	378	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.969	0.994	0.730	1e-159
356562014	378	PREDICTED: uncharacterized membrane prot	0.971	0.997	0.748	1e-156
357449677	395	Solute carrier family 35 member E3 [Medi	0.971	0.954	0.703	1e-155
15242035	390	Nucleotide/sugar transporter family prot	0.994	0.989	0.702	1e-155
297796595	390	At5g57100 [Arabidopsis lyrata subsp. lyr	0.994	0.989	0.7	1e-155

>gi|255573545|ref|XP_002527697.1| organic anion transporter, putative [Ricinus communis] gi|223532928|gb|EEF34696.1| organic anion transporter, putative [Ricinus communis]

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 302/386 (78%), Positives = 338/386 (87%), Gaps = 1/386 (0%)

Query: 3   MVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCG 62
           M++S EILNFLV+KDV KILKRKDSDAGERG+ALEE+++SLFN+ R  + AKRQEQR+C 
Sbjct: 1   MLFSHEILNFLVRKDVGKILKRKDSDAGERGRALEEVRSSLFNKLRFAESAKRQEQRICH 60

Query: 63  PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPP 122
           PI +L FNFVVA+SIIFMNKWVL+ +GF FPI LSFIHY +SW LMA+L AF++LPASPP
Sbjct: 61  PIIALAFNFVVAISIIFMNKWVLQGVGFHFPICLSFIHYLISWILMAILKAFSILPASPP 120

Query: 123 AKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVL 182
           +KS  LSLFTLGFVMS STGLANVSLKYN+VGFYQMAKIAVTPSIVL EFI + KRVS  
Sbjct: 121 SKSSFLSLFTLGFVMSLSTGLANVSLKYNNVGFYQMAKIAVTPSIVLLEFIWFGKRVSFS 180

Query: 183 KVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMW 242
           KV+ LT VSIGVAVATVTDLQFSLFGAC+ALAWI+PSAVNKILWS +QQRE+WTALALMW
Sbjct: 181 KVVALTVVSIGVAVATVTDLQFSLFGACIALAWIIPSAVNKILWSTMQQRENWTALALMW 240

Query: 243 KTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAIS 302
           KTTPITL FL SLIP LDPPGV S+ WN SNTL IL+SAFLGFLLQWSGALALGATSAIS
Sbjct: 241 KTTPITLFFLASLIPFLDPPGVFSYQWNDSNTLLILVSAFLGFLLQWSGALALGATSAIS 300

Query: 303 HVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQ 362
           HVVLGQFKTC++LLGNYYIFG+NPG TSICGAF AI GMS YTYLNL N K Q+ K S +
Sbjct: 301 HVVLGQFKTCVVLLGNYYIFGSNPGATSICGAFTAIGGMSGYTYLNLHNMKSQAGKTSPR 360

Query: 363 NGSSLPKSKLSKENGEKHDGYGDESV 388
             SSL KS+LS+ENG+ HDGYG ESV
Sbjct: 361 K-SSLTKSRLSRENGDSHDGYGGESV 385

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556268|ref|XP_003546448.1| PREDICTED: uncharacterized membrane protein At1g06890-like isoform 1 [Glycine max]

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/382 (73%), Positives = 328/382 (85%), Gaps = 5/382 (1%)

Query: 9   ILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLT 68
           + +F ++K VRKILKRKDSDAG++G+ALE+L+ASLFN+FRS +GAKRQ+QR+CGP  +L+
Sbjct: 1   MFSFFIRKGVRKILKRKDSDAGQKGRALEDLRASLFNQFRSSEGAKRQQQRICGPAIALS 60

Query: 69  FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLL 128
           FNF+VAV IIFMNK VL+ + F+FPI L+ IHY VSW LMA+L AF+ LPA+P +KS  L
Sbjct: 61  FNFLVAVGIIFMNKMVLQTVQFKFPILLTLIHYVVSWFLMAILKAFSFLPAAPSSKSTRL 120

Query: 129 S-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITL 187
           S LFTLGFVMS STG ANVSLKYNS+GFYQMAKIAVTPSIVLAEF+ YRK+VS  K + L
Sbjct: 121 STLFTLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYRKKVSFAKALAL 180

Query: 188 TAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPI 247
           T VSIGVAVATVTDLQF +FGACVALAWIVPSAVNKILWS LQQ+E+WTAL+LMWKTTPI
Sbjct: 181 TVVSIGVAVATVTDLQFHVFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPI 240

Query: 248 TLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLG 307
           TL+FL +++PCLDPPGVLSF+WNFSN++ I  SA LGFLLQWSGALALGATSAISHVVLG
Sbjct: 241 TLIFLAAMLPCLDPPGVLSFDWNFSNSMVIFASAILGFLLQWSGALALGATSAISHVVLG 300

Query: 308 QFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSL 367
           QFKTC++LLGNYY+FG+NPG  SICGAF AI GMS YTYLN+   + QS+K S +  S L
Sbjct: 301 QFKTCVLLLGNYYLFGSNPGKISICGAFTAIAGMSVYTYLNM---RQQSNKPSPRQASVL 357

Query: 368 PKSKLSKENGEKHDG-YGDESV 388
           PKSKL KENG  HDG YG ESV
Sbjct: 358 PKSKLGKENGSTHDGHYGAESV 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445968|ref|XP_002265761.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis vinifera]

 Score =  575 bits (1483), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 281/388 (72%), Positives = 328/388 (84%), Gaps = 2/388 (0%)

Query: 3   MVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCG 62
           M+ SR++LNFL++KDVRKILKRKDSDAGE+GKA+EEL+ASLFN  RS +GAKRQ+QR+CG
Sbjct: 1   MLCSRKMLNFLIRKDVRKILKRKDSDAGEKGKAMEELRASLFNELRSSEGAKRQQQRICG 60

Query: 63  PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPP 122
           P  +LTFNF+V+V II MNK VL  +GF +PIFL+FIHY +SW LMA+LNA ++LPA+PP
Sbjct: 61  PSVALTFNFLVSVGIILMNKLVLGRVGFNYPIFLTFIHYTLSWLLMAILNALSMLPAAPP 120

Query: 123 AKSGLLS-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSV 181
           +KS   S L +LG VMS S GLANVSLKYNSVGFYQMAKIAVTP+IVLAEFI + KRVS 
Sbjct: 121 SKSTPFSSLLSLGIVMSLSNGLANVSLKYNSVGFYQMAKIAVTPTIVLAEFILFAKRVSC 180

Query: 182 LKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALM 241
            KV+ LT VSIGVAVATVTDLQF  FGAC+ALAWI+PSAVNKILWSNLQQ+E+WTALALM
Sbjct: 181 QKVLALTVVSIGVAVATVTDLQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALM 240

Query: 242 WKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAI 301
           WKTTPITL FL +L+P LDPPG+LSF WN +NTLAILMSA LGFLLQWSGALALGATSA 
Sbjct: 241 WKTTPITLFFLVTLMPWLDPPGILSFGWNLNNTLAILMSAVLGFLLQWSGALALGATSAT 300

Query: 302 SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKAS- 360
           +HVVLGQFKTC+ILLG +++FG+NPGT SICGA  A+ GMS YTYLNL   +   +K S 
Sbjct: 301 THVVLGQFKTCVILLGGFFLFGSNPGTISICGATTALAGMSVYTYLNLLKPQQLPNKTSP 360

Query: 361 LQNGSSLPKSKLSKENGEKHDGYGDESV 388
            QN  +L KSKLSKENG+ HDG   E+V
Sbjct: 361 RQNSFTLSKSKLSKENGDTHDGDNMETV 388

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735438|emb|CBI17878.3| unnamed protein product [Vitis vinifera]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/382 (72%), Positives = 323/382 (84%), Gaps = 2/382 (0%)

Query: 9   ILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLT 68
           +LNFL++KDVRKILKRKDSDAGE+GKA+EEL+ASLFN  RS +GAKRQ+QR+CGP  +LT
Sbjct: 1   MLNFLIRKDVRKILKRKDSDAGEKGKAMEELRASLFNELRSSEGAKRQQQRICGPSVALT 60

Query: 69  FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLL 128
           FNF+V+V II MNK VL  +GF +PIFL+FIHY +SW LMA+LNA ++LPA+PP+KS   
Sbjct: 61  FNFLVSVGIILMNKLVLGRVGFNYPIFLTFIHYTLSWLLMAILNALSMLPAAPPSKSTPF 120

Query: 129 S-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITL 187
           S L +LG VMS S GLANVSLKYNSVGFYQMAKIAVTP+IVLAEFI + KRVS  KV+ L
Sbjct: 121 SSLLSLGIVMSLSNGLANVSLKYNSVGFYQMAKIAVTPTIVLAEFILFAKRVSCQKVLAL 180

Query: 188 TAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPI 247
           T VSIGVAVATVTDLQF  FGAC+ALAWI+PSAVNKILWSNLQQ+E+WTALALMWKTTPI
Sbjct: 181 TVVSIGVAVATVTDLQFHFFGACIALAWIIPSAVNKILWSNLQQQENWTALALMWKTTPI 240

Query: 248 TLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLG 307
           TL FL +L+P LDPPG+LSF WN +NTLAILMSA LGFLLQWSGALALGATSA +HVVLG
Sbjct: 241 TLFFLVTLMPWLDPPGILSFGWNLNNTLAILMSAVLGFLLQWSGALALGATSATTHVVLG 300

Query: 308 QFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKAS-LQNGSS 366
           QFKTC+ILLG +++FG+NPGT SICGA  A+ GMS YTYLNL   +   +K S  QN  +
Sbjct: 301 QFKTCVILLGGFFLFGSNPGTISICGATTALAGMSVYTYLNLLKPQQLPNKTSPRQNSFT 360

Query: 367 LPKSKLSKENGEKHDGYGDESV 388
           L KSKLSKENG+ HDG   E+V
Sbjct: 361 LSKSKLSKENGDTHDGDNMETV 382

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457211|ref|XP_004146342.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis sativus] gi|449520583|ref|XP_004167313.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis sativus]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 284/381 (74%), Positives = 325/381 (85%), Gaps = 6/381 (1%)

Query: 10  LNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLTF 69
           + FL KKDVRKILKRKDSDAG+RG++LE+L+ SLF++FRSP+GAKRQ+QR  GP  +LTF
Sbjct: 3   IKFLFKKDVRKILKRKDSDAGQRGRSLEDLRGSLFSKFRSPEGAKRQQQRSFGPAVALTF 62

Query: 70  NFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS 129
           NF VAVSIIFMNK VLK +GF+FPIFLSFIHY +SW LMA+ N F++LPASP +K+   S
Sbjct: 63  NFFVAVSIIFMNKLVLKTVGFKFPIFLSFIHYFISWILMAIFNFFSILPASPLSKTTRSS 122

Query: 130 -LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLT 188
            L TLG VMS STGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFI Y K+VS LKV+ L 
Sbjct: 123 TLLTLGLVMSLSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFILYGKKVSFLKVLALL 182

Query: 189 AVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPIT 248
            VSIGVAVATVTDLQF LFGAC+ALAWI+PSAVNKILWS+LQQ+E+WTALALMWKTTP+T
Sbjct: 183 VVSIGVAVATVTDLQFDLFGACIALAWIIPSAVNKILWSSLQQQENWTALALMWKTTPVT 242

Query: 249 LLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQ 308
           L    +LIP LDPPGVLSFNW++ NTLAIL+SA LGFLLQWSGALALGATSA+SHVVLGQ
Sbjct: 243 LCGFIALIPFLDPPGVLSFNWSYDNTLAILLSAILGFLLQWSGALALGATSAVSHVVLGQ 302

Query: 309 FKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLP 368
           FKTC+ILLGNYY+F A+PG TSICGAF AI+GMSFYTYLNL   + ++SK      S+ P
Sbjct: 303 FKTCVILLGNYYLFNADPGKTSICGAFTAIMGMSFYTYLNLRQQQLKTSK----QASNFP 358

Query: 369 KSKLSKENGEKHD-GYGDESV 388
           KSKL KENG  HD   G+ESV
Sbjct: 359 KSKLGKENGSPHDEKLGEESV 379

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530352|ref|XP_003533746.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized membrane protein At1g06890-like [Glycine max]

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/382 (73%), Positives = 323/382 (84%), Gaps = 6/382 (1%)

Query: 9   ILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLT 68
           + +F +KK VRK LKRKDSDAGE G+ALE+ +ASLFN+FRS +GAK Q+Q +CGP  +L+
Sbjct: 1   MFSFFIKKGVRKTLKRKDSDAGEIGRALEDFRASLFNQFRSSEGAKHQQQHICGPAIALS 60

Query: 69  FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLL 128
           FNF+VAV IIFMNK VL+ + F+FPI L+ IHY VSW LMA+L AF+ LPA+P +KS  L
Sbjct: 61  FNFLVAVGIIFMNKMVLQTVQFKFPILLTLIHYVVSWFLMAILKAFSFLPAAPSSKSTRL 120

Query: 129 S-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITL 187
           S LFTLGFVMS STG ANVSLKYNS+GFYQMAKIAVTPSIVLAEF+ YRK+VS  K + L
Sbjct: 121 STLFTLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYRKKVSFAKALAL 180

Query: 188 TAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPI 247
           T VSIGVAVATVTDLQF +FGACVALAWIVPSAVNKILWS LQQ+E+WTAL+LMWKTTPI
Sbjct: 181 TMVSIGVAVATVTDLQFHVFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPI 240

Query: 248 TLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLG 307
           TL+FL +++PCLDPPGVLSF+WNFSN++ I  SA LGFLLQWSGALALGATSAISHVVLG
Sbjct: 241 TLIFLAAMLPCLDPPGVLSFDWNFSNSMVIFASAILGFLLQWSGALALGATSAISHVVLG 300

Query: 308 QFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSL 367
           QFKTC++LLGNYY+FG+NPG  SICGAF AI GMS YTYLN+   + QS+K S +  S L
Sbjct: 301 QFKTCVLLLGNYYLFGSNPGKISICGAFTAIAGMSVYTYLNM---RQQSNKPSPRQ-SVL 356

Query: 368 PKSKLSKENGEKHDG-YGDESV 388
           PKSKL KENG  HDG YG ESV
Sbjct: 357 PKSKLGKENGSTHDGHYGAESV 378

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562014|ref|XP_003549270.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine max]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/381 (74%), Positives = 326/381 (85%), Gaps = 4/381 (1%)

Query: 9   ILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLT 68
           + NFL++KDVRKILKRKDSDAGE+G+ALE+L+ SLFN FRS +GAKRQ+QR CGP A+L+
Sbjct: 1   MFNFLLRKDVRKILKRKDSDAGEKGRALEDLRGSLFNEFRSSEGAKRQQQRTCGPAAALS 60

Query: 69  FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLL 128
           FNF +A+SIIF+NK VL+ + F+FPI LS IHY VSW LMAVLNAF+LLPASP   + L 
Sbjct: 61  FNFFIAISIIFINKMVLQTVKFKFPILLSLIHYIVSWLLMAVLNAFSLLPASPSKSTKLS 120

Query: 129 SLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLT 188
           +LFTLGFVMS STGLANVSLKYNS+GFYQMAKIAVTPSIV+AEF+ Y+K+VS  K + LT
Sbjct: 121 ALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYKKKVSWPKALALT 180

Query: 189 AVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPIT 248
            VSIGVAVATVTDLQF  FGACVALAWIVPSAVNKILWS LQQ+E+WTALALMWKTTPIT
Sbjct: 181 VVSIGVAVATVTDLQFHFFGACVALAWIVPSAVNKILWSRLQQQENWTALALMWKTTPIT 240

Query: 249 LLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQ 308
           L+FL +++PCLDPPGVLSF+WNF NTL IL SA LGFLLQWSGALALGATSA+SHVVLGQ
Sbjct: 241 LIFLAAMLPCLDPPGVLSFDWNFINTLVILTSAILGFLLQWSGALALGATSAVSHVVLGQ 300

Query: 309 FKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSKASLQNGSSLP 368
           FKTCIILLGNYY+FG+NPG  SICGAF AI GMS YTYLNL   K QS+K   +  + LP
Sbjct: 301 FKTCIILLGNYYLFGSNPGIISICGAFTAIAGMSVYTYLNL---KQQSNKIFPRQATLLP 357

Query: 369 KSKLSKENGEKHDG-YGDESV 388
           KSKLSKENG   +G Y  E+V
Sbjct: 358 KSKLSKENGTSQNGHYSAENV 378

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357449677|ref|XP_003595115.1| Solute carrier family 35 member E3 [Medicago truncatula] gi|355484163|gb|AES65366.1| Solute carrier family 35 member E3 [Medicago truncatula]

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 280/398 (70%), Positives = 324/398 (81%), Gaps = 21/398 (5%)

Query: 9   ILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLT 68
           + NFL+ KD RKILKRKDSDAGE+G+ALE+L+ASLFN+F   DG+KRQ++R+CGP  +LT
Sbjct: 1   MFNFLIGKDARKILKRKDSDAGEKGRALEDLRASLFNQFNFSDGSKRQQRRICGPATALT 60

Query: 69  FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLL 128
           FNF+VAV IIF+NK VL+ + F+FPI L+ IHY VSW  MAVL AF+LLP SP  KS  +
Sbjct: 61  FNFLVAVGIIFVNKMVLQTVKFKFPILLTLIHYVVSWFFMAVLKAFSLLPPSPSTKSTRM 120

Query: 129 S-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKV--- 184
           S LF LGFVMS STG ANVSLKYNS+GFYQMAKIAVTPSIV AEF+ YRK+VS+ KV   
Sbjct: 121 STLFALGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVFAEFVLYRKKVSLPKVHAL 180

Query: 185 -----------ITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE 233
                      + LT VSIGVAVATVTDLQF LFGACVALAWI+PSAVNKILWS LQQ+E
Sbjct: 181 TLFVLVFQIIVLALTLVSIGVAVATVTDLQFHLFGACVALAWIIPSAVNKILWSRLQQQE 240

Query: 234 SWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGAL 293
           +WTAL+LMWKTTPITL+FL +++PCLDPPGVLSF+WN SNTL I  SA LGFLLQWSGAL
Sbjct: 241 NWTALSLMWKTTPITLIFLAAMLPCLDPPGVLSFDWNLSNTLVIFGSAVLGFLLQWSGAL 300

Query: 294 ALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK 353
           ALGATSA+SHVVLGQFKTCI+LLGNY++FG+NPGT SICGAF AI G S YTYLN+   K
Sbjct: 301 ALGATSAVSHVVLGQFKTCILLLGNYFLFGSNPGTISICGAFTAIGGTSVYTYLNM---K 357

Query: 354 HQSSKASLQNGSSLPKSKLSKENGEK--HDG-YGDESV 388
            QS+K S +  S+LPKSKL KENG    +DG YG ESV
Sbjct: 358 QQSNKVSPRQPSTLPKSKLGKENGSTNGNDGHYGAESV 395

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242035|ref|NP_200520.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] gi|8843812|dbj|BAA97360.1| unnamed protein product [Arabidopsis thaliana] gi|332009463|gb|AED96846.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/390 (70%), Positives = 327/390 (83%), Gaps = 4/390 (1%)

Query: 3   MVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQ---R 59
           M+ + ++ +  +++DV+KILKRKDSDAGERGKALE+L+ASLFNRFRSP+  KRQ+Q   R
Sbjct: 1   MLLTPKMFSSWLRQDVKKILKRKDSDAGERGKALEDLRASLFNRFRSPETPKRQQQQQHR 60

Query: 60  LCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPA 119
           +CGP  +LTFNFVVA+SIIFMNKWVLKNIGF+FP+FL+FIHY V++ LMA+L +F+LLPA
Sbjct: 61  ICGPTVALTFNFVVAISIIFMNKWVLKNIGFEFPVFLTFIHYIVAYLLMALLKSFSLLPA 120

Query: 120 SPPA-KSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKR 178
           SPP+ KS LL L+TLG VMS STGLANVSLKYNSVGFYQMAKIAVTPSIV AEF+ YRKR
Sbjct: 121 SPPSTKSSLLPLYTLGIVMSLSTGLANVSLKYNSVGFYQMAKIAVTPSIVFAEFLWYRKR 180

Query: 179 VSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTAL 238
           VS +KV++LT VS+GVAVATVTDLQFSLFGACVA AWI+PSA NKILWSN+QQRE+WTAL
Sbjct: 181 VSFMKVVSLTVVSVGVAVATVTDLQFSLFGACVAFAWIIPSATNKILWSNMQQRENWTAL 240

Query: 239 ALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGAT 298
           ALMWKTTPITLLFL S+IP LDPPG LSFNW+ +NT AIL+SA LGF LQWSGALALGAT
Sbjct: 241 ALMWKTTPITLLFLVSMIPFLDPPGALSFNWSLTNTSAILVSALLGFFLQWSGALALGAT 300

Query: 299 SAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSK 358
           SAI+HVVLGQFKTC++LLGNYYIFG+N G  S+ GAFVAI+G S YTYLN      ++S 
Sbjct: 301 SAITHVVLGQFKTCVLLLGNYYIFGSNSGFISVGGAFVAIMGTSLYTYLNTRGQSLKTSS 360

Query: 359 ASLQNGSSLPKSKLSKENGEKHDGYGDESV 388
           +S        +    K++ +  + YG E+V
Sbjct: 361 SSSALSEKKSRFSDLKDDDKNLEPYGSEAV 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796595|ref|XP_002866182.1| At5g57100 [Arabidopsis lyrata subsp. lyrata] gi|297312017|gb|EFH42441.1| At5g57100 [Arabidopsis lyrata subsp. lyrata]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/390 (70%), Positives = 327/390 (83%), Gaps = 4/390 (1%)

Query: 3   MVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQ---R 59
           M+ + ++ +  ++KDV+KILKRKDSDAGERGKALE+L+ASLFNRFRSP+  KRQ+Q   R
Sbjct: 1   MLLTPKMFSSWLRKDVKKILKRKDSDAGERGKALEDLRASLFNRFRSPETPKRQQQQQHR 60

Query: 60  LCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPA 119
           +CGP  +LTFNF+VA+SIIF+NKWVLKNIGF+FP+FL+FIHY V++ LMA+L +F+LLPA
Sbjct: 61  ICGPTLALTFNFIVAISIIFVNKWVLKNIGFEFPVFLTFIHYIVAYLLMALLKSFSLLPA 120

Query: 120 SPPA-KSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKR 178
           SPP+ KS  L L+TLG VMS STGLANVSLKYNSVGFYQMAKIAVTPSIV AEF+ YRKR
Sbjct: 121 SPPSTKSSSLPLYTLGIVMSLSTGLANVSLKYNSVGFYQMAKIAVTPSIVFAEFLWYRKR 180

Query: 179 VSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTAL 238
           VS +KV+ LT VS+GVAVATVTDLQFSLFGACVA AWI+PSA NKILWSN+QQRE+WTAL
Sbjct: 181 VSFMKVVALTVVSVGVAVATVTDLQFSLFGACVAFAWIIPSATNKILWSNMQQRENWTAL 240

Query: 239 ALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGAT 298
           ALMWKTTPITLLFL S+IP LDPPG LSFNW+++NT AIL+SA LGF LQWSGALALGAT
Sbjct: 241 ALMWKTTPITLLFLVSMIPFLDPPGALSFNWSYANTSAILVSALLGFFLQWSGALALGAT 300

Query: 299 SAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSK 358
           SAI+HVVLGQFKTC++LLGNYYIFG+N G  S+CGAFVAI+G S YTYLN      ++S 
Sbjct: 301 SAITHVVLGQFKTCVLLLGNYYIFGSNSGLISVCGAFVAIMGTSLYTYLNTRGPSLKASS 360

Query: 359 ASLQNGSSLPKSKLSKENGEKHDGYGDESV 388
           +S        +    K++ +  + YG E+V
Sbjct: 361 SSSALSDKKSRFSDLKDDDKNLEPYGSEAV 390

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
TAIR|locus:2175569	390	AT5G57100 "AT5G57100" [Arabido	0.987	0.982	0.712	5.1e-145
TAIR|locus:2178373	398	AT5G55950 [Arabidopsis thalian	0.961	0.937	0.620	3e-124
TAIR|locus:2033097	357	AT1G06890 [Arabidopsis thalian	0.786	0.854	0.319	1.5e-37
TAIR|locus:2064316	353	AT2G30460 "AT2G30460" [Arabido	0.798	0.878	0.303	1.2e-35
TAIR|locus:504955965	342	AT2G28315 [Arabidopsis thalian	0.809	0.918	0.306	2.2e-34
UNIPROTKB|A4IFK2	313	SLC35E3 "Solute carrier family	0.737	0.913	0.298	1.2e-33
RGD|1564876	313	Slc35e3 "solute carrier family	0.737	0.913	0.304	2e-33
MGI|MGI:2448489	313	Slc35e3 "solute carrier family	0.737	0.913	0.304	6.7e-33
UNIPROTKB|Q7Z769	313	SLC35E3 "Solute carrier family	0.737	0.913	0.291	8.5e-33
ZFIN|ZDB-GENE-041210-186	317	slc35e3 "solute carrier family	0.742	0.908	0.292	8.5e-33

TAIR|locus:2175569 AT5G57100 "AT5G57100" [Arabidopsis thaliana (taxid:3702)]

 Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
 Identities = 280/393 (71%), Positives = 334/393 (84%)

Query:     3 MVYSREILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQ---R 59
             M+ + ++ +  +++DV+KILKRKDSDAGERGKALE+L+ASLFNRFRSP+  KRQ+Q   R
Sbjct:     1 MLLTPKMFSSWLRQDVKKILKRKDSDAGERGKALEDLRASLFNRFRSPETPKRQQQQQHR 60

Query:    60 LCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPA 119
             +CGP  +LTFNFVVA+SIIFMNKWVLKNIGF+FP+FL+FIHY V++ LMA+L +F+LLPA
Sbjct:    61 ICGPTVALTFNFVVAISIIFMNKWVLKNIGFEFPVFLTFIHYIVAYLLMALLKSFSLLPA 120

Query:   120 SPPA-KSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKR 178
             SPP+ KS LL L+TLG VMS STGLANVSLKYNSVGFYQMAKIAVTPSIV AEF+ YRKR
Sbjct:   121 SPPSTKSSLLPLYTLGIVMSLSTGLANVSLKYNSVGFYQMAKIAVTPSIVFAEFLWYRKR 180

Query:   179 VSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTAL 238
             VS +KV++LT VS+GVAVATVTDLQFSLFGACVA AWI+PSA NKILWSN+QQRE+WTAL
Sbjct:   181 VSFMKVVSLTVVSVGVAVATVTDLQFSLFGACVAFAWIIPSATNKILWSNMQQRENWTAL 240

Query:   239 ALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGAT 298
             ALMWKTTPITLLFL S+IP LDPPG LSFNW+ +NT AIL+SA LGF LQWSGALALGAT
Sbjct:   241 ALMWKTTPITLLFLVSMIPFLDPPGALSFNWSLTNTSAILVSALLGFFLQWSGALALGAT 300

Query:   299 SAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSK 358
             SAI+HVVLGQFKTC++LLGNYYIFG+N G  S+ GAFVAI+G S YTYLN   ++ QS K
Sbjct:   301 SAITHVVLGQFKTCVLLLGNYYIFGSNSGFISVGGAFVAIMGTSLYTYLN---TRGQSLK 357

Query:   359 ASLQNGS-SLPKSKLS--KENGEKHDGYGDESV 388
              S  + + S  KS+ S  K++ +  + YG E+V
Sbjct:   358 TSSSSSALSEKKSRFSDLKDDDKNLEPYGSEAV 390

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2178373 AT5G55950 [Arabidopsis thaliana (taxid:3702)]

 Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
 Identities = 239/385 (62%), Positives = 299/385 (77%)

Query:     9 ILNFLVKKDVRKILKRKDSDAGERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLT 68
             +++ L+ KD RK LKRKDSDA E G+ALEEL++SL+N  ++ +GAKRQ+QR CGP+ +++
Sbjct:     3 LVDSLLGKDARKFLKRKDSDAAEAGRALEELRSSLYNELKTSEGAKRQQQRFCGPVVAMS 62

Query:    69 FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSG-L 127
             FNFVVAV II  NK V+  +GF FPIFL+ IHY V+W L+A   + +LLP SPP+K+   
Sbjct:    63 FNFVVAVGIILANKLVMGRVGFNFPIFLTLIHYTVAWILLAFFKSLSLLPMSPPSKTTPF 122

Query:   128 LSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITL 187
              SLF+LG VM+F++GLAN SLK+NSVGFYQMAKIAVTP+IVLAEF+ ++K +S  KV+ L
Sbjct:   123 SSLFSLGAVMAFASGLANTSLKHNSVGFYQMAKIAVTPTIVLAEFVLFKKTISSTKVMAL 182

Query:   188 TAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPI 247
               VS+GVA+ATVTDL+F+LFGA VA+AWI+PSA+NKILWSNLQQ+ +WTALALMWKTTP 
Sbjct:   183 AVVSLGVAIATVTDLEFNLFGALVAVAWIIPSAINKILWSNLQQQANWTALALMWKTTPF 242

Query:   248 TLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLG 307
             T+ FL +L+P LDPPGVL F W+ +N+ AIL+SA LGFLLQWSGALALGATSA SHVVLG
Sbjct:   243 TVFFLLALMPWLDPPGVLLFKWDLTNSSAILISALLGFLLQWSGALALGATSATSHVVLG 302

Query:   308 QFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK--HQSSKASLQNGS 365
             QFKTC+ILLG Y IFG++PG  SICGA  A+ GMS YT+LNL      H S+K       
Sbjct:   303 QFKTCVILLGGYVIFGSDPGFISICGAIAALGGMSVYTWLNLPGKSIDHMSNK------- 355

Query:   366 SLPKSKL--SKENGEKHDGYGDESV 388
              LPK  +  SK   E  DG G+  V
Sbjct:   356 QLPKQNVTVSKPKAEADDGGGETGV 380

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2033097 AT1G06890 [Arabidopsis thaliana (taxid:3702)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 103/322 (31%), Positives = 174/322 (54%)

Query:    62 GPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLP 118
             G I +L+ + V +VSI+  NK ++  +GF F   L+  H  V++  + V   +  F   P
Sbjct:    10 GTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKMFEHKP 69

Query:   119 ASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKR 178
               P A  G       G +   S GL N+SL +NSVGFYQM K+A+ P  VL E + +RK+
Sbjct:    70 FDPRAVMGF------GILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKK 123

Query:   179 VSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTAL 238
              S     +LT + +GV +ATVTDLQ ++ G+ ++L  +V + V +I+ + +Q++   ++ 
Sbjct:   124 FSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMTNTIQKKFKVSST 183

Query:   239 ALMWKTTP---ITLLFLGSLIP-CLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALA 294
              L++++ P   ITL   G  +   L    V +F +       I++S  +   + +S  L 
Sbjct:   184 QLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLV 243

Query:   295 LGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKH 354
             +G TS +++ VLG  KTC++L   Y +        +I G  VA++GM  Y+Y   C+ + 
Sbjct:   244 IGKTSPVTYQVLGHLKTCLVLAFGYVLLRDPFDWRNILGILVAVIGMVVYSYY--CSIET 301

Query:   355 QSSKASLQNGSSLPKSKLSKEN 376
             Q  KAS +  + LP+ K S+++
Sbjct:   302 QQ-KAS-ETSTQLPQMKESEKD 321

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2064316 AT2G30460 "AT2G30460" [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 99/326 (30%), Positives = 169/326 (51%)

Query:    62 GPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLP 118
             G I +L+ + V +VSI+  NK ++  +GF F   L+  H  V++  + V   +  F   P
Sbjct:    10 GTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKFFEHKP 69

Query:   119 ASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKR 178
               P A  G       G +   S GL N+SL +NSVGFYQM K+A+ P  V+ E I +RK 
Sbjct:    70 FDPRAVLGF------GVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFFRKM 123

Query:   179 VSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTAL 238
              S     +L  + +GV +ATVTDLQ ++ G+ ++L  ++ + V +I+ + +Q++   ++ 
Sbjct:   124 FSRKIQFSLVILLLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQIMTNTIQKKYKVSST 183

Query:   239 ALMWKTTP---ITLLFLGSLIP-CLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALA 294
              L++++ P   ITL   G  +   L    V +F +       I++S  +   + +S  L 
Sbjct:   184 QLLYQSCPYQAITLFVTGPFLDGLLTNQNVFAFKYTSQVVFFIVLSCLISVSVNFSTFLV 243

Query:   295 LGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKH 354
             +G TS +++ VLG  KTC++L   Y +        +I G  VA++GM  Y+Y     ++ 
Sbjct:   244 IGKTSPVTYQVLGHLKTCLVLAFGYLLLKDAFSWRNILGILVAVIGMVLYSYYCTLETQQ 303

Query:   355 QSSKASLQNGSSLPKSK---LSKENG 377
             ++++ S Q        K   +S ENG
Sbjct:   304 KATETSTQLPQMDENEKDPLVSAENG 329

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:504955965 AT2G28315 [Arabidopsis thaliana (taxid:3702)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 100/326 (30%), Positives = 172/326 (52%)

Query:    62 GPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFAL-LPAS 120
             G I +L  +   +VSI+  NK ++ N+GF F   L+  H  V++  + V  A+ L    +
Sbjct:    10 GVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHV--AYKLNFFEN 67

Query:   121 PPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVS 180
              P     + LF  G +   S GL N+SL +NS+GFYQM K+A+ P  VL E +   K+ S
Sbjct:    68 KPIDMRTVVLF--GLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKKFS 125

Query:   181 VLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALAL 240
                  +L  + +GV +A++TDLQ +  G+ ++L  I  + V +IL + +Q+R + T+  L
Sbjct:   126 QKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNVTSTQL 185

Query:   241 MWKTTPI--TLLFL-GSLIP-CLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALG 296
             ++++ P    +LF+ G  +   L    V SF+++      I +S  +   + +S  L +G
Sbjct:   186 LYQSAPFQAAILFVSGPFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFSTFLVIG 245

Query:   297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTT-SICGAFVAIVGMSFYTYL-NLCNSKH 354
              TS +++ VLG  KTC++L   Y +   +P T  +I G  +A++GM  Y+Y  ++ +   
Sbjct:   246 KTSPVTYQVLGHLKTCLVLAFGYTLLH-DPFTPRNIAGILIAVLGMLLYSYFCSVASKSK 304

Query:   355 QSSKASLQNGSSLPKSKLSKENGEKH 380
             Q+S  S   G     + L  +  E H
Sbjct:   305 QASSDSTFLGKDRDTTPLLGQENENH 330

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|A4IFK2 SLC35E3 "Solute carrier family 35 member E3" [Bos taurus (taxid:9913)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 91/305 (29%), Positives = 162/305 (53%)

Query:    65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPAS- 120
             A L  N +V++ I+F+NKW+  + GF   + L+ +H+ V+W  + V   L+ FA  P S 
Sbjct:    16 AGLLLNLLVSICIVFLNKWIYVHYGFP-NMSLTLVHFVVTWLGLYVCQKLDIFA--PKSL 72

Query:   121 PPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVS 180
             PP+K  LL+L   GFV+       N+SL+ N++G YQ+AK   TP I++ + +CY+K  S
Sbjct:    73 PPSKLLLLALSFCGFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFS 127

Query:   181 VLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALA 239
                 +TL  +++GV + +  D++F+  G   A   ++ +++ ++ W   +Q E    ++ 
Sbjct:   128 TKIRLTLIPITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQV-WVGAKQHELQVNSMQ 186

Query:   240 LMWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALG 296
             L++   P++   L   +P  +P    G +   W+ S  L +L+S  + F++  S    +G
Sbjct:   187 LLYYQAPMSSAMLLVAVPFFEPVFAEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIG 246

Query:   297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQS 356
              TS +++ + G FK CI L G Y +F          G    + G+  YT+  L  S+ + 
Sbjct:   247 NTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHFKL--SEQEG 304

Query:   357 SKASL 361
             SK+ L
Sbjct:   305 SKSKL 309

GO:0016021 "integral to membrane" evidence=IEA

RGD|1564876 Slc35e3 "solute carrier family 35, member E3" [Rattus norvegicus (taxid:10116)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 93/305 (30%), Positives = 161/305 (52%)

Query:    65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPASP 121
             A L FN +V++ I+F+NKW+  + GF   + L+ +H+ V+W  + V   L+ FA  P S 
Sbjct:    16 AGLLFNLLVSICIVFLNKWIYVHHGFP-NMSLTLVHFVVTWLGLYVCQKLDIFA--PKSL 72

Query:   122 P-AKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVS 180
             P +K  LL+L   GFV+       N+SL+ N++G YQ+AK   TP I+  +   Y+KR S
Sbjct:    73 PLSKLLLLALSFCGFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFS 127

Query:   181 VLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALA 239
             +   +TL  +++GV + +  D++F   G   A   +V +++ ++ W   +Q E    ++ 
Sbjct:   128 IRIQLTLIPITVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQV-WVGAKQHELQVNSMQ 186

Query:   240 LMWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALG 296
             L++   P++   L   +PC +P    G +   W+ S  L +L+S  + F++  S    +G
Sbjct:   187 LLYYQAPMSSAMLLVAVPCFEPVFAEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIG 246

Query:   297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQS 356
              TS +++ + G FK CI L G Y +F          G    + G+  YT+  L  S+ + 
Sbjct:   247 NTSPVTYNMFGHFKFCITLCGGYILFKDPLSVNQGLGILCTLFGILAYTHFKL--SEQEG 304

Query:   357 SKASL 361
             SK+ L
Sbjct:   305 SKSKL 309

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2448489 Slc35e3 "solute carrier family 35, member E3" [Mus musculus (taxid:10090)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 93/305 (30%), Positives = 160/305 (52%)

Query:    65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPASP 121
             A L FN +V++ I+F+NKW+  + GF   + L+ +H+ V+W  + +   LN FA  P S 
Sbjct:    16 AGLLFNLLVSICIVFLNKWIYVHHGFP-NMSLTLVHFVVTWLGLYICQKLNIFA--PKSL 72

Query:   122 P-AKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVS 180
             P +K  LL+L   GFV+       N+SL+ N++G YQ+AK   TP I+  +   Y+KR S
Sbjct:    73 PLSKLLLLALSFCGFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFS 127

Query:   181 VLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALA 239
             V   +TL  +++GV + +  D++F   G   A   +V +++ ++ W   +Q E    ++ 
Sbjct:   128 VRIQLTLIPITVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQV-WVGAKQHELQVNSMQ 186

Query:   240 LMWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALG 296
             L++   P++   L   +P  +P    G +   W+ S  L +L+S  + F++  S    +G
Sbjct:   187 LLYYQAPMSSAMLLVAVPFFEPVFAEGGIFGPWSVSALLMVLLSGIIAFMVNLSIYWIIG 246

Query:   297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQS 356
              TS +++ + G FK CI L G Y +F          G    + G+  YT+  L  S+ + 
Sbjct:   247 NTSPVTYNMFGHFKFCITLCGGYILFKDPLSVNQGLGILCTLFGILTYTHFKL--SEQEG 304

Query:   357 SKASL 361
             SK+ L
Sbjct:   305 SKSKL 309

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q7Z769 SLC35E3 "Solute carrier family 35 member E3" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 89/305 (29%), Positives = 160/305 (52%)

Query:    65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAV---LNAFALLPAS- 120
             A L FN +V++ I+F+NKW+    GF   + L+ +H+ V+W  + +   L+ FA  P S 
Sbjct:    16 AGLLFNLLVSICIVFLNKWIYVYHGFP-NMSLTLVHFVVTWLGLYICQKLDIFA--PKSL 72

Query:   121 PPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVS 180
             PP++  LL+L   GFV+       N+SL+ N++G YQ+AK   TP I+  +  CY+K  S
Sbjct:    73 PPSRLLLLALSFCGFVV-----FTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFS 127

Query:   181 VLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALA 239
                 +TL  +++GV + +  D++F+  G   A   ++ +++ ++ W   +Q E    ++ 
Sbjct:   128 TRIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQV-WVGAKQHELQVNSMQ 186

Query:   240 LMWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALG 296
             L++   P++   L   +P  +P    G +   W+ S  L +L+S  + F++  S    +G
Sbjct:   187 LLYYQAPMSSAMLLVAVPFFEPVFGEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIG 246

Query:   297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQS 356
              TS +++ + G FK CI L G Y +F          G    + G+  YT+  L  S+ + 
Sbjct:   247 NTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFKL--SEQEG 304

Query:   357 SKASL 361
             S++ L
Sbjct:   305 SRSKL 309

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-041210-186 slc35e3 "solute carrier family 35, member E3" [Danio rerio (taxid:7955)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 88/301 (29%), Positives = 156/301 (51%)

Query:    64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALL-PAS-P 121
             IA L  N + +V I+F+NKW+  + GF   + L+ IH+ ++W  + +     +  P S  
Sbjct:    19 IAGLLVNLLSSVCIVFINKWIYVHYGFP-NMTLTLIHFVMTWLGLFICQKMDIFAPKSLR 77

Query:   122 PAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSV 181
             P+K  LL+L   GFV+       N+SL+ N++G YQ+AK+  TP I+  + + YRK  S 
Sbjct:    78 PSKILLLALSFCGFVV-----FTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFST 132

Query:   182 LKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRE-SWTALAL 240
                +TL  +++GV + +  D++F+L G   A   ++ +++ ++ W   +Q E    ++ L
Sbjct:   133 KIKLTLVPITLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQV-WVGAKQHELQVNSMQL 191

Query:   241 MWKTTPITLLFLGSLIPCLDP---PGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGA 297
             ++   P++  FL  L+P  +P    G +   W+F     +L+S  + FL+  S    +G 
Sbjct:   192 LYYQAPMSSAFLLVLVPFFEPLTGDGGIFGPWSFLALFMVLLSGVIAFLVNLSIYWIIGN 251

Query:   298 TSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSS 357
             TS +++ + G FK CI LLG Y +F          G    + G+  YT+  L   +   S
Sbjct:   252 TSPVTYNMFGHFKFCITLLGGYVLFQDPLSLNQGLGILCTLTGILAYTHFKLAEQEEGKS 311

Query:   358 K 358
             +
Sbjct:   312 R 312

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00031314001 SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (388 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	5e-05
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	0.002

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 7/118 (5%)

Query: 236 TALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSN-------TLAILMSAFLGFLLQ 288
             L L++  +P+  + L   +   +   +  F   F          L +L+S  L FL  
Sbjct: 32  NVLELLYYLSPVAFIVLLPGLLFSEGFKLGKFILKFFGDLKTSRYVLLLLLSGVLAFLYN 91

Query: 289 WSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY 346
            S    LG TS ++  V G  K  ++++ +  IFG      +I G  +AI+G+  Y+Y
Sbjct: 92  LSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 19/290 (6%)

Query: 74  AVSIIF--MNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLF 131
            +++ F   NK +L    F +P F + I  AV      +  +  L      + + L  L 
Sbjct: 12  FLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLL 69

Query: 132 TLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTP--SIVLAEFICYRKRVSVLKVITLTA 189
            +  V +     +NVSL   +V F    K A+ P  S+VL+ F   ++  S L + +L  
Sbjct: 70  PVAIVHTIGHVTSNVSLSKVAVSFTHTIK-AMEPFFSVVLSAFFLGQEFPSTLWL-SLLP 127

Query: 190 VSIGVAVATVTDLQFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITL 249
           +  GVA+A+ T+L F+  G   A+   +      I        +S     L    + ++L
Sbjct: 128 IVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSL 187

Query: 250 LFLGSLIPCLDPPGVLSFNWNFSNT----------LAILMSAFLGFLLQWSGALALGATS 299
             L       + P  L   +  + +            +    F  F  Q +  L LG  S
Sbjct: 188 FLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML-LGRVS 246

Query: 300 AISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL 349
            ++H V    K  ++++ +   FG       + G  +AI G+  Y+ +  
Sbjct: 247 PLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.97
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.96
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.94
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.93
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.93
KOG1581	327	consensus UDP-galactose transporter related protei	99.89
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.88
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.85
KOG1580	337	consensus UDP-galactose transporter related protei	99.83
KOG2765	416	consensus Predicted membrane protein [Function unk	99.8
COG2962	293	RarD Predicted permeases [General function predict	99.77
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.77
KOG1582	367	consensus UDP-galactose transporter related protei	99.76
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.76
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.73
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.73
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.73
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.71
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.71
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.7
KOG2766	336	consensus Predicted membrane protein [Function unk	99.59
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.3
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.12
COG2510	140	Predicted membrane protein [Function unknown]	99.08
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.04
COG2510	140	Predicted membrane protein [Function unknown]	99.01
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.98
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.91
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.89
PRK15430	296	putative chloramphenical resistance permease RarD;	98.78
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.69
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.67
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.59
PLN00411	358	nodulin MtN21 family protein; Provisional	98.42
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.24
COG2962	293	RarD Predicted permeases [General function predict	98.21
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.2
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.18
PRK11689	295	aromatic amino acid exporter; Provisional	98.12
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.1
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.1
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.1
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.05
PRK11272	292	putative DMT superfamily transporter inner membran	98.04
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.88
PRK13499	345	rhamnose-proton symporter; Provisional	97.87
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.73
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.6
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.53
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.51
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.5
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.43
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.36
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.35
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.26
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.21
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.05
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.04
COG2076	106	EmrE Membrane transporters of cations and cationic	97.03
PRK11431	105	multidrug efflux system protein; Provisional	97.02
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.92
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.7
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.62
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.6
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.59
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.56
PRK13499	345	rhamnose-proton symporter; Provisional	96.5
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.44
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.37
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.37
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.27
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.19
PRK11431	105	multidrug efflux system protein; Provisional	96.15
COG2076	106	EmrE Membrane transporters of cations and cationic	96.1
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.95
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.99
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	94.83
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	94.64
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.06
KOG4510	346	consensus Permease of the drug/metabolite transpor	93.89
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.29
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	93.25
KOG2765	416	consensus Predicted membrane protein [Function unk	92.89
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	91.03
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	90.78
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.68
KOG1581	327	consensus UDP-galactose transporter related protei	90.33
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	88.81
KOG1580	337	consensus UDP-galactose transporter related protei	86.56
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	84.28
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	82.63
KOG3912	372	consensus Predicted integral membrane protein [Gen	80.85

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=6.7e-41  Score=309.10  Aligned_cols=299  Identities=31%  Similarity=0.494  Sum_probs=266.8

Q ss_pred             ccccchhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHH
Q 016521           54 KRQEQRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFT  132 (388)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~  132 (388)
                      ++++++.+....+..+|++.+++.++.||+++++++||||++++.+|..++.+........+..+..+...+.++. +++
T Consensus         9 ~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llp   88 (316)
T KOG1441|consen    9 SGQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLP   88 (316)
T ss_pred             ccccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHH
Confidence            4455566777888999999999999999999999899999999999999999999998888877766655556665 999


Q ss_pred             HHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHH
Q 016521          133 LGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVA  212 (388)
Q Consensus       133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~  212 (388)
                      +|++++++.++.|.|+.|+|+|++|++|+++|++++++++++.+|++++..+++++.+..||++.+.+|.++|+.|++.+
T Consensus        89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a  168 (316)
T KOG1441|consen   89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA  168 (316)
T ss_pred             HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhh--hccCCCHHHHHHHHhHHHHHHHH-HHHHhcCCCcc---cccccchhhHHHHHHHHHHHHH
Q 016521          213 LAWIVPSAVNKILWSNLQ--QRESWTALALMWKTTPITLLFLG-SLIPCLDPPGV---LSFNWNFSNTLAILMSAFLGFL  286 (388)
Q Consensus       213 l~a~~~~a~~~i~~~~~~--~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~  286 (388)
                      +++.++.+.+++++|+++  |++++|+.++++|+++++.+.++ |+....|+...   ....|+...+..+..+ +++++
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~  247 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFL  247 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHH
Confidence            999999999999999998  56789999999999999999988 66555555443   3334555544444444 99999


Q ss_pred             HHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccccc
Q 016521          287 LQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK  353 (388)
Q Consensus       287 ~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~  353 (388)
                      .|++.|++++++||+++++.+++|.++.++.|+++|++++|+.+..|++++++|+++|++.|.++++
T Consensus       248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            9999999999999999999999999999999999999999999999999999999999998865433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=9.6e-37  Score=287.75  Aligned_cols=285  Identities=20%  Similarity=0.200  Sum_probs=234.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhh
Q 016521           64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGL  143 (388)
Q Consensus        64 ~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (388)
                      ...+..|++.+++.+++||+++++  +++|++++++|+.++.+++.+....+..++++.++++...+++.|++++.+..+
T Consensus         4 ~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817         4 GLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999999999987  788999999999999887766643333333334455555688899999899999


Q ss_pred             hhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHHHHH
Q 016521          144 ANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAVNK  223 (388)
Q Consensus       144 ~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~  223 (388)
                      .|+|++|+++++++++++++|+++++++++++|||++++++.+++++++|+++....+.+++..|++++++++++|++|.
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~  161 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN  161 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988877777778889999999999999999


Q ss_pred             HHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccc-------cchh-hHHHHHHHHH-HHHHHHHHHHHH
Q 016521          224 ILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFN-------WNFS-NTLAILMSAF-LGFLLQWSGALA  294 (388)
Q Consensus       224 i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~~~-~~~~~~~~~~~~  294 (388)
                      ++.|+..++.+.++.+++.|++..+.+.++++....|++......       +... .+......+. .....+...+.+
T Consensus       162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (302)
T TIGR00817       162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML  241 (302)
T ss_pred             HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998765568899999999999998888887665543211110       1111 1222223333 233344566778


Q ss_pred             hccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcc
Q 016521          295 LGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLC  350 (388)
Q Consensus       295 i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~  350 (388)
                      ++++||+++++.++++|++++++|++++||++|+.+++|+++++.|+++|++.|.+
T Consensus       242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999876543

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.6e-35  Score=283.73  Aligned_cols=285  Identities=19%  Similarity=0.230  Sum_probs=236.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCC--cccchhHHHHHHHHHH
Q 016521           61 CGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPP--AKSGLLSLFTLGFVMS  138 (388)
Q Consensus        61 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  138 (388)
                      ++....+..|+.+++..++.||++++.  +|+|++++.+|++++++++.++...+.+++++.  .++....+++.|++..
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            566778889999999999999999998  889999999999999887666554433222211  1223334888998877


Q ss_pred             HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHH
Q 016521          139 FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVP  218 (388)
Q Consensus       139 ~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~  218 (388)
                      ......+.|+++++++++++++++.|+++++++++++|||++++++++++++++|+++.+.++.++++.|++++++++++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            66666789999999999999999999999999999999999999999999999999999988888889999999999999


Q ss_pred             HHHHHHHHHHhhhcc-----CCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc------c---ccc-hhhHHHHHHHHHH
Q 016521          219 SAVNKILWSNLQQRE-----SWTALALMWKTTPITLLFLGSLIPCLDPPGVLS------F---NWN-FSNTLAILMSAFL  283 (388)
Q Consensus       219 ~a~~~i~~~~~~~~~-----~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~------~---~~~-~~~~~~l~~~~~~  283 (388)
                      +++|+++.|+..++.     +.++.++..++.+++.++++|+....|.+....      .   .+. ...+..++.+++.
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~  285 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW  285 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Confidence            999999999987654     367777777788899988888876666432110      0   111 1123345566777


Q ss_pred             HHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521          284 GFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       284 ~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~  347 (388)
                      .++.+...|.++++++|+++++.+++||++++++|++++||++|+.+++|+++++.|+++|++.
T Consensus       286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            7788888889999999999999999999999999999999999999999999999999999865

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=4e-29  Score=238.80  Aligned_cols=287  Identities=13%  Similarity=0.102  Sum_probs=215.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC--CCcccchhHHHHHHHHHH
Q 016521           61 CGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS--PPAKSGLLSLFTLGFVMS  138 (388)
Q Consensus        61 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  138 (388)
                      ..+...++...+++.++..+.|..++. |.+ |..++++|+.++.+++.++.+.++++++  +..+++...+...|++..
T Consensus        12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         12 AVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence            445667778899999999999999965 899 9999999999999888776544332221  112333334555666555


Q ss_pred             HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHH------hccccchhhHHHHHhhhhheeeeeec-cc---------
Q 016521          139 FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFIC------YRKRVSVLKVITLTAVSIGVAVATVT-DL---------  202 (388)
Q Consensus       139 ~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~------l~e~~~~~~~~~l~l~~~Gv~l~~~~-~~---------  202 (388)
                      ....+.+++++|++++.++++.++.|++++++++++      +|||++++++++++++++|+.++... +.         
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            566689999999999999999999999999999999      69999999999999999999875531 10         


Q ss_pred             --------------ccc-HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcc--c
Q 016521          203 --------------QFS-LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGV--L  265 (388)
Q Consensus       203 --------------~~~-~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~--~  265 (388)
                                    +.+ ..|.++.++++++||+|++++|+..++++ ++.....++..++.+.+.+.....+..+.  +
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~  248 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW  248 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence                          112 45999999999999999999998876643 23455556665555544444444443211  1


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          266 SFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      ...++.. ...+++.++...+....+++++++.+|.+++++.+++|++++++|++++||++++.+++|+++++.|+++.+
T Consensus       249 ~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        249 IIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             eeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            1123333 233555565555555556789999999999999999999999999999999999999999999999998877


Q ss_pred             hhhccc
Q 016521          346 YLNLCN  351 (388)
Q Consensus       346 ~~~~~~  351 (388)
                      +.+.+|
T Consensus       328 ~~~~~~  333 (358)
T PLN00411        328 WGKANE  333 (358)
T ss_pred             hhhhhh
Confidence            654433

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.97  E-value=1.2e-29  Score=225.74  Aligned_cols=280  Identities=21%  Similarity=0.304  Sum_probs=240.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC----CCcccchhH-HHHHHHHH
Q 016521           63 PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS----PPAKSGLLS-LFTLGFVM  137 (388)
Q Consensus        63 ~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~  137 (388)
                      .++.+..|+++|+++.+++|+.-.+  |+||++++.+|+++-+++.....+....+.+    ..+++...+ +.|++++.
T Consensus        17 ~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat   94 (349)
T KOG1443|consen   17 TLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT   94 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh
Confidence            3445688999999999999998776  7788999999999998887766554433222    233444444 88999999


Q ss_pred             HHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHH
Q 016521          138 SFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIV  217 (388)
Q Consensus       138 ~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~  217 (388)
                      ++++++.|+|++|+++++|+|.|++.++|+.+++.++-=||+++.-.+.+.++.+|+.+.++.+.+++..|+++.+++.+
T Consensus        95 a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~  174 (349)
T KOG1443|consen   95 ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASL  174 (349)
T ss_pred             hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHH
Confidence            99999999999999999999999999999999998766699999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccC---CCHHHHHHHHhHHHHHHHHHHHHhcCCCccccc--cc---ch----hhHHHHHHHHHHHH
Q 016521          218 PSAVNKILWSNLQQRES---WTALALMWKTTPITLLFLGSLIPCLDPPGVLSF--NW---NF----SNTLAILMSAFLGF  285 (388)
Q Consensus       218 ~~a~~~i~~~~~~~~~~---~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~---~~----~~~~~l~~~~~~~~  285 (388)
                      +.++...+.+.+.++.+   -+|...++...+...+.+++....+|++.....  .+   +.    .....+...|+.++
T Consensus       175 ~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF  254 (349)
T KOG1443|consen  175 LSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAF  254 (349)
T ss_pred             hhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHH
Confidence            99999999888876654   589999999999999999999888888654321  11   11    22356677788899


Q ss_pred             HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521          286 LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       286 ~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly  344 (388)
                      ++..+.|.++.+++..+.++.|..|.+.+.++|..+.+|+++..+++|..+++.|+..|
T Consensus       255 ~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  255 LLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999888

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=2.9e-29  Score=226.64  Aligned_cols=293  Identities=22%  Similarity=0.280  Sum_probs=260.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHH
Q 016521           61 CGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFS  140 (388)
Q Consensus        61 ~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (388)
                      .......++|+.+|..+++.||+++++++||--+++...|++.+.+.+.++.+.+..+.++.+++.+++.+|..+.+.++
T Consensus        11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~   90 (314)
T KOG1444|consen   11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM   90 (314)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH
Confidence            34466778999999999999999999988886666777999999999999998888777778888888899999999999


Q ss_pred             HhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHH
Q 016521          141 TGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSA  220 (388)
Q Consensus       141 ~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a  220 (388)
                      +..+..+++|++++.++++|..+|+++++.+..++|.+++...|.++....+|......+|.+++..|..|.+..+++.+
T Consensus        91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a  170 (314)
T KOG1444|consen   91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTA  170 (314)
T ss_pred             HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999889999999999999


Q ss_pred             HHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccc---c-chhhHHHHHHHHHHHHHHHHHHHHHhc
Q 016521          221 VNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFN---W-NFSNTLAILMSAFLGFLLQWSGALALG  296 (388)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~-~~~~~~~l~~~~~~~~~~~~~~~~~i~  296 (388)
                      .+.+..|+..+..+.+.+.+++|.++.+.+.+.+...++++.+....+   | ....+..+.++|+++++.+++.+++.+
T Consensus       171 ~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~  250 (314)
T KOG1444|consen  171 AFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR  250 (314)
T ss_pred             HHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998888888999999999999999988888777664421211   2 235578899999999999999999999


Q ss_pred             cCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccccc
Q 016521          297 ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK  353 (388)
Q Consensus       297 ~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~  353 (388)
                      ..|+++.+++|..+...+.+.+.+++|++.++..++|..+-+.|..+|++.+.++++
T Consensus       251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK  307 (314)
T ss_pred             hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence            999999999996666777777777778889999999999999999999998765433

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.96  E-value=4.2e-27  Score=221.89  Aligned_cols=272  Identities=21%  Similarity=0.277  Sum_probs=223.7

Q ss_pred             HHHHHHHHhh-ccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHHHHHHHhhhhhhhhcchhh
Q 016521           77 IIFMNKWVLK-NIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFVMSFSTGLANVSLKYNSVG  154 (388)
Q Consensus        77 ~~~~nK~~~~-~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~~s~s  154 (388)
                      ..++.+.+.. .++.++|.++++.|+....+...+.....+   .+..++.+++ .++.++...++..+.|.|++|+|.+
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p   91 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYP   91 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence            3445555555 444447999999999999887776654443   1122334443 7778899999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecccc----c------cHHHHHHHHHHHHHHHHHHH
Q 016521          155 FYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQ----F------SLFGACVALAWIVPSAVNKI  224 (388)
Q Consensus       155 ~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~~~i  224 (388)
                      ++++.|++.|+++++++++++|||++++++++++++++|+++....|.+    .      ...|+++.+.+.++.+++.+
T Consensus        92 ~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~  171 (303)
T PF08449_consen   92 TQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGV  171 (303)
T ss_pred             HHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998875521    1      12399999999999999999


Q ss_pred             HHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHh--cCCC-ccccc-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCch
Q 016521          225 LWSNLQQRESWTALALMWKTTPITLLFLGSLIPC--LDPP-GVLSF-NWNFSNTLAILMSAFLGFLLQWSGALALGATSA  300 (388)
Q Consensus       225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a  300 (388)
                      ++++..++++.+++++++|.+.++.+.+++....  .++. +...+ ...+..+..+...++.+...+.+.+.++++.||
T Consensus       172 ~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~a  251 (303)
T PF08449_consen  172 YQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSA  251 (303)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999999999999999999999888777765  2221 11111 123345667778888888888888899999999


Q ss_pred             hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccc
Q 016521          301 ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCN  351 (388)
Q Consensus       301 ~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~  351 (388)
                      ++.+++.+++.++++++++++||+++++.+++|+++++.|..+|++.++++
T Consensus       252 l~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  252 LTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            999999999999999999999999999999999999999999999877543

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=5.7e-30  Score=224.05  Aligned_cols=296  Identities=17%  Similarity=0.244  Sum_probs=249.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcc--CCChHHHHHHHHHHHHHHHHHHHHHccCC-------CCCCCcccchhHHHHH
Q 016521           63 PIASLTFNFVVAVSIIFMNKWVLKNI--GFQFPIFLSFIHYAVSWALMAVLNAFALL-------PASPPAKSGLLSLFTL  133 (388)
Q Consensus        63 ~~~~~~~~~~~s~~~~~~nK~~~~~~--g~~~p~~l~~~r~~~a~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~  133 (388)
                      +......+...++++.+.||++++..  ..+.|.+++++|.++...+...+.+....       +..+.+-+....++++
T Consensus        29 v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlpl  108 (347)
T KOG1442|consen   29 VDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPL  108 (347)
T ss_pred             hhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcch
Confidence            34455667788999999999999963  34569999999999988877666443211       1112233344458899


Q ss_pred             HHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---ccccHHHHH
Q 016521          134 GFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---LQFSLFGAC  210 (388)
Q Consensus       134 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~  210 (388)
                      ++.+.+.+.++|++|+|+++++|++-++++.+|+++++++++|+|-+.....++.++++|..+-..+|   ...++.|.+
T Consensus       109 svVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gvi  188 (347)
T KOG1442|consen  109 SVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVI  188 (347)
T ss_pred             hheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999888877   457799999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCC-cccc--cccchhhHHHHHHHHHHHHHH
Q 016521          211 VALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPP-GVLS--FNWNFSNTLAILMSAFLGFLL  287 (388)
Q Consensus       211 ~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~~  287 (388)
                      +++.+.++-|+..++.|+......---|.+.+|.+..+.+..+|...+.++. ....  ..+....|..+.++|+++|.+
T Consensus       189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m  268 (347)
T KOG1442|consen  189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM  268 (347)
T ss_pred             HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999977755444568999999999999988888776442 2333  234567789999999999999


Q ss_pred             HHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcccccccccc
Q 016521          288 QWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSKHQSSK  358 (388)
Q Consensus       288 ~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~~~~~~  358 (388)
                      ++...+.|+.+||+++.+.++.|.+.+.+++..+++|..+..-|.|-.+++.|...|++.|+++.+++...
T Consensus       269 gyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~  339 (347)
T KOG1442|consen  269 GYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ  339 (347)
T ss_pred             hheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence            99999999999999999999999999999999999999999999999999999999999988776654433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.95  E-value=3.1e-25  Score=208.41  Aligned_cols=263  Identities=12%  Similarity=0.021  Sum_probs=193.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhh
Q 016521           68 TFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVS  147 (388)
Q Consensus        68 ~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  147 (388)
                      ....+.+.+.....|...++  +| |..++++|+.++.+++.++.  + +++  .+++.+......++.+.....+.+.+
T Consensus        10 l~a~~~Wg~~~~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~--~-~~~--~~~~~~~~~~~~~l~~~~~~~~~~~a   81 (295)
T PRK11689         10 LIAILLWSTMVGLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTV--G-FPR--LRQFPKRYLLAGGLLFVSYEICLALS   81 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHc--c-ccc--cccccHHHHHHHhHHHHHHHHHHHHH
Confidence            33445556778889998887  78 99999999999988887653  1 111  11222222444455555666777777


Q ss_pred             hhc----chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc-----------cccHHHHHHH
Q 016521          148 LKY----NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL-----------QFSLFGACVA  212 (388)
Q Consensus       148 l~~----~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~-----------~~~~~G~~~~  212 (388)
                      ++|    .+++.++++.++.|+++++++++++|||++++++.+++++++|++++..++.           +.+..|++++
T Consensus        82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~  161 (295)
T PRK11689         82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLA  161 (295)
T ss_pred             HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHH
Confidence            754    5777888999999999999999999999999999999999999988875432           1235699999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHH
Q 016521          213 LAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGA  292 (388)
Q Consensus       213 l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  292 (388)
                      ++++++||+|.++.|+..++  .++.....   ..+...+.+.....+.+ .  ..++...|..+.+.++.+...++.++
T Consensus       162 l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~-~--~~~~~~~~~~l~~~~~~t~~~~~l~~  233 (295)
T PRK11689        162 FIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQP-A--MVFSLPAIIKLLLAAAAMGFGYAAWN  233 (295)
T ss_pred             HHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCc-c--ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998654  34554322   22222222222222221 1  12344556556666665555566778


Q ss_pred             HHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          293 LALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       293 ~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      +.+++.+|.+++++.+++|+++++++++++||++++.+++|+++++.|+++...
T Consensus       234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            899999999999999999999999999999999999999999999999977644

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=2.6e-25  Score=208.31  Aligned_cols=269  Identities=18%  Similarity=0.214  Sum_probs=213.2

Q ss_pred             HHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCC--CCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhH
Q 016521           78 IFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLP--ASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGF  155 (388)
Q Consensus        78 ~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~  155 (388)
                      ...+..+-++ |++.|.+.+++.++.-.++.......+..+  ..+..++.+++.+..+++-...+.+.+.|++|++++.
T Consensus        29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS  107 (334)
T PF06027_consen   29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS  107 (334)
T ss_pred             HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence            4444555555 788899999888877666554433333221  1122344555566778898889999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc---------cccHHHHHHHHHHHHHHHHHHHHH
Q 016521          156 YQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL---------QFSLFGACVALAWIVPSAVNKILW  226 (388)
Q Consensus       156 ~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~i~~  226 (388)
                      .|++.+++.|++++++++++|+|+++.+++|++++++|++++...|.         +....|+++++.+++.||++++++
T Consensus       108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~  187 (334)
T PF06027_consen  108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE  187 (334)
T ss_pred             HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999988876542         234789999999999999999999


Q ss_pred             HHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHh
Q 016521          227 SNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVL  306 (388)
Q Consensus       227 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~  306 (388)
                      |+..|+  .+..+.......++.+...+...++|..+....+|+...+..++..+++-+......-..++..+|+..++.
T Consensus       188 E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLs  265 (334)
T PF06027_consen  188 EKLVKK--APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLS  265 (334)
T ss_pred             HHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehH
Confidence            998876  457888888888888888777777777666666777655554444444444434344457899999999998


Q ss_pred             hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521          307 GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL  349 (388)
Q Consensus       307 ~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~  349 (388)
                      .....+.+++++++++|+++++..++|.++++.|+.+|+....
T Consensus       266 LLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  266 LLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            8888999999999999999999999999999999999986543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=1.1e-24  Score=204.57  Aligned_cols=273  Identities=12%  Similarity=0.074  Sum_probs=206.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHH-HHHHh
Q 016521           64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVM-SFSTG  142 (388)
Q Consensus        64 ~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  142 (388)
                      ...+....+.+.+.....|...++  .+ |..++++|+.++.+++.++...++.+  .++++.+......|.+. .....
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHH
Confidence            334444556666678889988875  77 99999999999998877665444322  12344444444555543 45566


Q ss_pred             hhhhhh-hcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec-cccccHHHHHHHHHHHHHHH
Q 016521          143 LANVSL-KYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT-DLQFSLFGACVALAWIVPSA  220 (388)
Q Consensus       143 ~~~~al-~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~-~~~~~~~G~~~~l~a~~~~a  220 (388)
                      +.+++. ++++++.++++.++.|+++++++++ +|||++++++.+++++++|+.++..+ +.+.+..|.+++++++++||
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a  163 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWA  163 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHH
Confidence            778888 9999999999999999999999985 79999999999999999999887543 33455679999999999999


Q ss_pred             HHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH-HHHHHHhccCc
Q 016521          221 VNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ-WSGALALGATS  299 (388)
Q Consensus       221 ~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~i~~~~  299 (388)
                      .|.+..|+..++   ++.....++..++...+.++....+.+..  ...+...|..+.+.++++.... ..++.++++.+
T Consensus       164 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~  238 (292)
T PRK11272        164 FGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVR  238 (292)
T ss_pred             HHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999998886533   23445566766666666665544332211  1123455666666676655444 45567899999


Q ss_pred             hhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521          300 AISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       300 a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~  347 (388)
                      +.+++++.+++|+++++++++++||++|+.+++|+++++.|+.+.++.
T Consensus       239 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        239 PALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999887654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.94  E-value=1.2e-24  Score=204.62  Aligned_cols=273  Identities=10%  Similarity=0.014  Sum_probs=190.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC-C---CcccchhHHHHHHHHHHHHH
Q 016521           66 SLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS-P---PAKSGLLSLFTLGFVMSFST  141 (388)
Q Consensus        66 ~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~  141 (388)
                      .+....+.+.......|.. .+  ++ |..++++|++++.+++.++...++.... .   .+++........++..+.+.
T Consensus        12 ~~l~a~~~wg~~~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (296)
T PRK15430         12 LALAAYFIWGIAPAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNW   87 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence            3333344444445666875 33  77 9999999999998866555433221110 0   01122122334456677788


Q ss_pred             hhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHHHH
Q 016521          142 GLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPSAV  221 (388)
Q Consensus       142 ~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~  221 (388)
                      .+.++|++++|++.++++.++.|+++++++++++|||+++++|.+++++++|+.++...+.+.    ..++++++++||+
T Consensus        88 ~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~  163 (296)
T PRK15430         88 LLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAF  163 (296)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998875433222    1468888999999


Q ss_pred             HHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchh
Q 016521          222 NKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAI  301 (388)
Q Consensus       222 ~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~  301 (388)
                      |.+..|+..++...+......++.+++.+...+   ..+.+.......+...+..++..++.+...+++.+..+++.+|.
T Consensus       164 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~  240 (296)
T PRK15430        164 YGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS  240 (296)
T ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence            999988865432223344444455554433221   11211110001111223344445555556667778899999999


Q ss_pred             hHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521          302 SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL  349 (388)
Q Consensus       302 ~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~  349 (388)
                      +++++.+++|++++++|++++||++++.+++|+++++.|+.+......
T Consensus       241 ~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~  288 (296)
T PRK15430        241 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI  288 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988888765443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=7.5e-24  Score=199.52  Aligned_cols=267  Identities=13%  Similarity=0.144  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHH-HHHHhhhhhhhh
Q 016521           71 FVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVM-SFSTGLANVSLK  149 (388)
Q Consensus        71 ~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~  149 (388)
                      .+.+.......|..+++  ++ |..++++|+.++.+.+.++...   ++.  ++   ......++.. .....+.+.+++
T Consensus        13 ~~~Wg~~~~~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~~---~~~--~~---~~~~~~g~~~~~~~~~~~~~~~~   81 (299)
T PRK11453         13 VVVWGLNFVVIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVAR---PKV--PL---NLLLGYGLTISFGQFAFLFCAIN   81 (299)
T ss_pred             HHHHhhhHHHHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhcC---CCC--ch---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            44445567777988876  78 9999999999987665544311   111  11   1233334432 234456678888


Q ss_pred             c-chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---ccccHHHHHHHHHHHHHHHHHHHH
Q 016521          150 Y-NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---LQFSLFGACVALAWIVPSAVNKIL  225 (388)
Q Consensus       150 ~-~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~  225 (388)
                      | .+++.++++.++.|+++.+++++++|||++.+++++++++++|+.++...+   .+.++.|+++++.++++|+.|.++
T Consensus        82 ~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~  161 (299)
T PRK11453         82 FGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIF  161 (299)
T ss_pred             hcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            8 689999999999999999999999999999999999999999998876532   223467999999999999999999


Q ss_pred             HHHhhhccC-CCHHHHHHHHhHHHHHHHHHHHHhcCCCccc---ccccchhhHHHHHHHHHHHHHHHHHH-HHHhccCch
Q 016521          226 WSNLQQRES-WTALALMWKTTPITLLFLGSLIPCLDPPGVL---SFNWNFSNTLAILMSAFLGFLLQWSG-ALALGATSA  300 (388)
Q Consensus       226 ~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~a  300 (388)
                      .|+..++.+ ........++...+.+.+.......+.+...   ...++...|..+++.++++....+.. +..+++.+|
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a  241 (299)
T PRK11453        162 NKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYET  241 (299)
T ss_pred             HHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence            998765432 2233344444444443333333333432211   01234556777778877777666544 578999999


Q ss_pred             hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          301 ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       301 ~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      .+++.+.+++|++++++|++++||+++..+++|++++++|+++..+.+
T Consensus       242 ~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        242 WRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            999999999999999999999999999999999999999998765533

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.94  E-value=3.5e-24  Score=197.80  Aligned_cols=254  Identities=17%  Similarity=0.104  Sum_probs=198.8

Q ss_pred             HHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHH
Q 016521           77 IIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFY  156 (388)
Q Consensus        77 ~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~  156 (388)
                      .....|+.+++ +.| |..+++.|++++.+++.++...+     +++++..+.....++..+++..+.+.|++|++++.+
T Consensus         4 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~   76 (260)
T TIGR00950         4 TGVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA   76 (260)
T ss_pred             hHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence            35667888876 466 89999999999888877654433     122222223444455667888899999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc-ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 016521          157 QMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD-LQFSLFGACVALAWIVPSAVNKILWSNLQQRESW  235 (388)
Q Consensus       157 ~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~  235 (388)
                      +++.++.|+++++++++++|||++++++.+++++++|+.++...+ .+.+..|+++++.++++|+.+.++.|+..++.+.
T Consensus        77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~  156 (260)
T TIGR00950        77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP  156 (260)
T ss_pred             HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence            999999999999999999999999999999999999998875433 4556789999999999999999999998766554


Q ss_pred             CHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH-HHHHHHHHHhccCchhhHHHhhhhhHHHH
Q 016521          236 TALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGF-LLQWSGALALGATSAISHVVLGQFKTCII  314 (388)
Q Consensus       236 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~i~~~~a~~~sv~~~l~~v~~  314 (388)
                      ++.....+...++.+.+.+.....+...    ..+...|..+.+.++++. ......++++++.++.+++++.+++|+++
T Consensus       157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~  232 (260)
T TIGR00950       157 ELLQFTGWVLLLGALLLLPFAWFLGPNP----QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA  232 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            4555555666777766666654433221    124445655666666654 44455678999999999999999999999


Q ss_pred             HHHHHhhcCCCccccchhhhHHHHHHH
Q 016521          315 LLGNYYIFGANPGTTSICGAFVAIVGM  341 (388)
Q Consensus       315 ~~~~~l~~ge~~t~~~i~G~~li~~Gv  341 (388)
                      ++++++++||++++.+++|+.+++.|+
T Consensus       233 ~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       233 LLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999986

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.93  E-value=4.4e-23  Score=193.68  Aligned_cols=264  Identities=14%  Similarity=0.031  Sum_probs=193.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhh
Q 016521           66 SLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLAN  145 (388)
Q Consensus        66 ~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (388)
                      .+++-.++........|+.+++  +| |..+.++|++++.+++.++...++.   +.++++....+..|+..+....+.+
T Consensus        16 ~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~   89 (293)
T PRK10532         16 LLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRL---RFAKEQRLPLLFYGVSLGGMNYLFY   89 (293)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhc---cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444445556689999987  77 9999999999999888766432221   1223444445556666777778889


Q ss_pred             hhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec--c-ccccHHHHHHHHHHHHHHHHH
Q 016521          146 VSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT--D-LQFSLFGACVALAWIVPSAVN  222 (388)
Q Consensus       146 ~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~a~~~~a~~  222 (388)
                      ++++|+|++.+.++..+.|+++++++.    |+++..  .++.++++|+.++...  + .+.+..|++++++++++||.|
T Consensus        90 ~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~  163 (293)
T PRK10532         90 LSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIY  163 (293)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988763    555544  4566778898776532  2 234567999999999999999


Q ss_pred             HHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHH-HHHHHhccCchh
Q 016521          223 KILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQW-SGALALGATSAI  301 (388)
Q Consensus       223 ~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~i~~~~a~  301 (388)
                      .+..|+..++  .++... .++..++...+.++....+. .   ..++...|..+++.++++....+ .+++.+++.+|.
T Consensus       164 ~v~~r~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~-~---~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~  236 (293)
T PRK10532        164 ILSGQRAGAE--HGPATV-AIGSLIAALIFVPIGALQAG-E---ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTR  236 (293)
T ss_pred             HHHHHHHhcc--CCchHH-HHHHHHHHHHHHHHHHHccC-c---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence            9999988654  345554 34555555555555443322 1   12334445445566666665555 557899999999


Q ss_pred             hHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          302 SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       302 ~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      +++++.+++|++++++|++++||++++.+++|++++++|++.+.+..
T Consensus       237 ~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        237 TFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999998887543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.93  E-value=1.2e-24  Score=185.23  Aligned_cols=285  Identities=18%  Similarity=0.226  Sum_probs=242.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhh
Q 016521           65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLA  144 (388)
Q Consensus        65 ~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (388)
                      ...+.|++.|+.+++.||++++..||+....+.+.|.+++.+.+.+++..+..+.+   .+.....++.++.....+...
T Consensus         9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~   85 (309)
T COG5070           9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTS   85 (309)
T ss_pred             hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhc
Confidence            35678999999999999999999999988899999999999988888766644322   222223456666666666778


Q ss_pred             hhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecccc--------ccHHHHHHHHHHH
Q 016521          145 NVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQ--------FSLFGACVALAWI  216 (388)
Q Consensus       145 ~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~a~  216 (388)
                      ..+++|.+++.|++.+.++.+.++..+..++|.|++..+..+.++.+..-.+..++|.+        .+ .|.+|....+
T Consensus        86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nc  164 (309)
T COG5070          86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNC  164 (309)
T ss_pred             ccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhh
Confidence            89999999999999999999999999999999999999999999999988888888763        23 6999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc--cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016521          217 VPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLS--FNWNFSNTLAILMSAFLGFLLQWSGALA  294 (388)
Q Consensus       217 ~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~  294 (388)
                      ++.+.+.+..|+-.+-.+...++.++|.+..+.+.++.+..++|++...+  .+........+.++|+++++.+++.-|+
T Consensus       165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWc  244 (309)
T COG5070         165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWC  244 (309)
T ss_pred             HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhcccee
Confidence            99999998887766655667789999999999999999998888765432  2333445678899999999999999999


Q ss_pred             hccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccccc
Q 016521          295 LGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCNSK  353 (388)
Q Consensus       295 i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~~~  353 (388)
                      ++.++.++.+++|.++.....+.|.++|||+.+...+..+.+-+.+...|.+.+.++++
T Consensus       245 vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         245 VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999888899988765433

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.89  E-value=1.6e-20  Score=167.86  Aligned_cols=256  Identities=15%  Similarity=0.195  Sum_probs=212.3

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHH
Q 016521           90 FQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIV  168 (388)
Q Consensus        90 ~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~  168 (388)
                      |..|.++.++|-+++.++-......+..+   .+...|++ ....++...++..|++.||+|++-++..++|++-.+.++
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            45589999999999988875554333222   23333444 667788888899999999999999999999999999999


Q ss_pred             HHHHHHhccccchhhHHHHHhhhhheeeeeeccc---------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHH
Q 016521          169 LAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL---------QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALA  239 (388)
Q Consensus       169 l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~  239 (388)
                      ++..++.|+|+++.+++...++.+|+.+....+.         .+++.|+.++....+..++-+..++++.+++++++++
T Consensus       125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~  204 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLH  204 (327)
T ss_pred             HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhH
Confidence            9999999999999999999999999988776421         2568999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHhcCCCccc---cc-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHH
Q 016521          240 LMWKTTPITLLFLGSLIPCLDPPGVL---SF-NWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIIL  315 (388)
Q Consensus       240 l~~~~~~~~~~~l~~~~~~~~~~~~~---~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~  315 (388)
                      +|++.++++++.-....  .+....+   ++ .-++..+.-+.+.+.++...+.+.|..+++.|+.+.+.+.+.+.++++
T Consensus       205 mM~~vNLf~~i~~~~~l--i~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si  282 (327)
T KOG1581|consen  205 MMFGVNLFSAILNGTYL--ILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSI  282 (327)
T ss_pred             HHHHHHHHHHHHHHHhh--hcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHH
Confidence            99999999887655542  2221111   11 123445666777778888889899999999999999999999999999


Q ss_pred             HHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcc
Q 016521          316 LGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLC  350 (388)
Q Consensus       316 ~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~  350 (388)
                      +++.+.||++++..|+.|..+++.|+.+-.+.+.+
T Consensus       283 ~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  283 MLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            99999999999999999999999999887776655

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.88  E-value=1.8e-20  Score=175.07  Aligned_cols=261  Identities=10%  Similarity=-0.032  Sum_probs=174.9

Q ss_pred             HHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchh
Q 016521           76 SIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFA--LLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSV  153 (388)
Q Consensus        76 ~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~  153 (388)
                      ......|...++  -+ +  .++++...+.+++.++...+  +.+.++++++.+......++.......+.+.++++.++
T Consensus        15 ~~~~~~k~~~~~--~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~   89 (281)
T TIGR03340        15 GWNLMAKSHADK--EP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADV   89 (281)
T ss_pred             HHHHHHhhcCCc--hh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence            334555644443  12 3  34666666655555544332  11112222333333555566677788899999999999


Q ss_pred             hHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc-ccccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016521          154 GFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD-LQFSLFGACVALAWIVPSAVNKILWSNLQQR  232 (388)
Q Consensus       154 s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~  232 (388)
                      +..+.+.++.|+++++++++++|||+++++|+|++++++|+.++...+ .+.+..|+.++++++++|++|.+..|+..++
T Consensus        90 ~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~  169 (281)
T TIGR03340        90 GLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALG  169 (281)
T ss_pred             hhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccc
Confidence            999999999999999999999999999999999999999998775433 2345678889999999999999987765432


Q ss_pred             cC--CCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhh
Q 016521          233 ES--WTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFK  310 (388)
Q Consensus       233 ~~--~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~  310 (388)
                      .+  .+......++.......+.+.....+.....  ..+...+..+...++.+...+...+..+++.++.+.+...++.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~  247 (281)
T TIGR03340       170 VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF--PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTS  247 (281)
T ss_pred             hhcccccHHHHHHHHHHHHHHHHHHHHHHhccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccH
Confidence            21  1111112222212111111111111211110  1112223344444555555556677899999999999999999


Q ss_pred             HHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521          311 TCIILLGNYYIFGANPGTTSICGAFVAIVGMSF  343 (388)
Q Consensus       311 ~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l  343 (388)
                      |++++++|++++||+++..+++|+++++.|+.+
T Consensus       248 pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       248 IVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.85  E-value=2.9e-18  Score=160.29  Aligned_cols=265  Identities=17%  Similarity=0.098  Sum_probs=190.0

Q ss_pred             HHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcch
Q 016521           73 VAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNS  152 (388)
Q Consensus        73 ~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s  152 (388)
                      .+.......|....+ ..+ +....+.|...+.+........+.....+..+...+..+..++.......+.+.++++++
T Consensus        18 ~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (292)
T COG0697          18 LWGLSFIALKLAVES-LDP-FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTS   95 (292)
T ss_pred             HHHHHHHHHHHHhcc-cCC-hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            333334444554443 233 566667799988887444433322111111112123355556667778889999999999


Q ss_pred             hhHHHHHHHhHHHHHHHHHH-HHhccccchhhHHHHHhhhhheeeeeecccccc---HHHHHHHHHHHHHHHHHHHHHHH
Q 016521          153 VGFYQMAKIAVTPSIVLAEF-ICYRKRVSVLKVITLTAVSIGVAVATVTDLQFS---LFGACVALAWIVPSAVNKILWSN  228 (388)
Q Consensus       153 ~s~~~il~~~~p~~~~l~~~-~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~i~~~~  228 (388)
                      ++.++++.++.|+++.++++ +++|||++++++.++++++.|+.++...+...+   ..|+++++.++++++++.+..|+
T Consensus        96 ~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~  175 (292)
T COG0697          96 ASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKR  175 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999997 666999999999999999999999988665433   58999999999999999999888


Q ss_pred             hhhccCCCHHHHHH-HHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH-HHHHHHHHhccCchhhHHHh
Q 016521          229 LQQRESWTALALMW-KTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFL-LQWSGALALGATSAISHVVL  306 (388)
Q Consensus       229 ~~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~i~~~~a~~~sv~  306 (388)
                      ..   +.++..... ++..  ...++..........   .......+..+...++++.. .+...+..+++.++...+..
T Consensus       176 ~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~  247 (292)
T COG0697         176 LS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALL  247 (292)
T ss_pred             hc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence            76   344555544 3333  111122111122111   12344456666666766664 55666789999999999999


Q ss_pred             hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521          307 GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       307 ~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~  347 (388)
                      .+++|+.+++++++++||+++..+++|+++++.|+.+.+..
T Consensus       248 ~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         248 SLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999887654

>TIGR00688 rarD rarD protein

Probab=99.85  E-value=6.7e-19  Score=162.24  Aligned_cols=242  Identities=13%  Similarity=0.056  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCC-----C-CCCcccc-hhHHHHHHHHHH
Q 016521           66 SLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLP-----A-SPPAKSG-LLSLFTLGFVMS  138 (388)
Q Consensus        66 ~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~-----~-~~~~~~~-~~~~~~~~~~~~  138 (388)
                      .+.+..+.+.......|. ..+  ++ |..++++|++++.+++.++...++++     + ++.++++ .......|++.+
T Consensus         6 ~~i~a~~~wg~~~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   81 (256)
T TIGR00688         6 VSLLASFLFGYMYYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIG   81 (256)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence            334444455666777887 444  77 99999999999988766543222211     1 1111222 223556677788


Q ss_pred             HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHH
Q 016521          139 FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVP  218 (388)
Q Consensus       139 ~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~  218 (388)
                      .+..+.++|+++++++.++++.++.|+++++++++++|||++++++++++++++|++++...+.+.+    .++++++++
T Consensus        82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~  157 (256)
T TIGR00688        82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFS  157 (256)
T ss_pred             HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999999999999987654322221    357889999


Q ss_pred             HHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccch-hhHHHHHHHHHHHHHHHHHHHHHhcc
Q 016521          219 SAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF-SNTLAILMSAFLGFLLQWSGALALGA  297 (388)
Q Consensus       219 ~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~i~~  297 (388)
                      ||.|.+..|+..++ +  ..+.... .....+...+.....+.+.. . .++. ..|..++..++++...+...+..+++
T Consensus       158 ~a~~~i~~~~~~~~-~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~  231 (256)
T TIGR00688       158 FTAYGLIRKALKNT-D--LAGFCLE-TLSLMPVAIYYLLQTDFATV-Q-QTNPFPIWLLLVLAGLITGTPLLAFVIAANR  231 (256)
T ss_pred             HHHHHHHHhhcCCC-C--cchHHHH-HHHHHHHHHHHHHHhccCcc-c-ccCchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999998887543 2  2222111 11111111111111111111 1 1122 35666666666666666777889999


Q ss_pred             CchhhHHHhhhhhHHHHHHHHHhh
Q 016521          298 TSAISHVVLGQFKTCIILLGNYYI  321 (388)
Q Consensus       298 ~~a~~~sv~~~l~~v~~~~~~~l~  321 (388)
                      .+|.++++..+++|++++++++++
T Consensus       232 ~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       232 LPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999765

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.83  E-value=1.3e-19  Score=155.82  Aligned_cols=254  Identities=12%  Similarity=0.109  Sum_probs=207.2

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHH
Q 016521           90 FQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVL  169 (388)
Q Consensus        90 ~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l  169 (388)
                      |.|.+.+.+.|..+..+..-++...+.  ..+.++..-+....++.-+.+.....|.|++|+|-++..+-+++-|+-+++
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir~--~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi  127 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIRK--KTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI  127 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeecc--cccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence            556788888888888777755543332  222222222335667777778888999999999999999999999999999


Q ss_pred             HHHHHhccccchhhHHHHHhhhhheeeeeeccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHH
Q 016521          170 AEFICYRKRVSVLKVITLTAVSIGVAVATVTDL-------QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMW  242 (388)
Q Consensus       170 ~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~  242 (388)
                      ++.++.+++++|+++..++.+++||++..+.+.       ....+|-++.+++.-..++....++++++.+..+.-++|.
T Consensus       128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~  207 (337)
T KOG1580|consen  128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF  207 (337)
T ss_pred             eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence            999999999999999999999999999877532       2335788999999999999999999999888888899999


Q ss_pred             HHhHHHHHHHHHHHHhcCC-Cccccccc-chhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHh
Q 016521          243 KTTPITLLFLGSLIPCLDP-PGVLSFNW-NFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYY  320 (388)
Q Consensus       243 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l  320 (388)
                      ++++.+.+.+...+.+.++ +..+.+.. .+..|+-+...++.+.+.+++.|..+...+|.+.|++.+-+..++++.+++
T Consensus       208 ~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVl  287 (337)
T KOG1580|consen  208 YTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVL  287 (337)
T ss_pred             HHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHH
Confidence            9999998877666554433 22222222 345577788888888888999999999999999999999999999999999


Q ss_pred             hcCCCccccchhhhHHHHHHHHHHH
Q 016521          321 IFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       321 ~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      +|++++++.||+|..+++.|...-.
T Consensus       288 lf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  288 LFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            9999999999999999999987644

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.80  E-value=3e-18  Score=157.31  Aligned_cols=220  Identities=17%  Similarity=0.148  Sum_probs=173.6

Q ss_pred             HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc-------
Q 016521          130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL-------  202 (388)
Q Consensus       130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~-------  202 (388)
                      .+.++.+..+.+...|.||+|++++..+++.+++-.|+.+++.++..||+++.+.+++++.++|+++++.+|.       
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            4445556667788899999999999999999999999999999999999999999999999999999998743       


Q ss_pred             -cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccch-hhHHHHH
Q 016521          203 -QFSLFGACVALAWIVPSAVNKILWSNLQQRE--SWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF-SNTLAIL  278 (388)
Q Consensus       203 -~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~  278 (388)
                       +....|.++++++++.||+|.++.|+...++  ++|.-.+..+..++..+.+.|...+++......+..+. .....++
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv  321 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV  321 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence             2337899999999999999999999887555  56666666677777776666554444332222222211 1223344


Q ss_pred             HHHHHH-HHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521          279 MSAFLG-FLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL  349 (388)
Q Consensus       279 ~~~~~~-~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~  349 (388)
                      +.++.+ ++--+.+.+..-.++|+.+++-..+..+++++...++-|.++|+.+++|...+++|.+.-++..+
T Consensus       322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            444444 44446777788899999999999999999999999999999999999999999999988776544

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.77  E-value=2.6e-16  Score=141.02  Aligned_cols=275  Identities=14%  Similarity=0.035  Sum_probs=197.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCC-C-C--CcccchhHHHHHHHHHHH
Q 016521           64 IASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPA-S-P--PAKSGLLSLFTLGFVMSF  139 (388)
Q Consensus        64 ~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~  139 (388)
                      +..+..+ +.+.-.-++.|.+-.   .| +..+...|.+-+++++..+....++.+ . .  .+++........+...+.
T Consensus        10 l~~l~Ay-~lwG~lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~   84 (293)
T COG2962          10 LLALLAY-LLWGLLPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGL   84 (293)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            3344443 334445666666654   56 889999999888887765543322211 1 1  112222335666777788


Q ss_pred             HHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccccccHHHHHHHHHHHHHH
Q 016521          140 STGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQFSLFGACVALAWIVPS  219 (388)
Q Consensus       140 ~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  219 (388)
                      +++...||..+-.+=-+++=.+..|.+.++++++++|||+++.||++++++.+||..-+....+.+|..+.+++    +|
T Consensus        85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~----sf  160 (293)
T COG2962          85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALAL----SF  160 (293)
T ss_pred             HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH----HH
Confidence            88888899988667677777788899999999999999999999999999999999988888888887776655    78


Q ss_pred             HHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCc
Q 016521          220 AVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATS  299 (388)
Q Consensus       220 a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~  299 (388)
                      ++|...-|+    .++++.+-...-...-.+..+....+.+..+-+....+...+..+...|..+..--......-++.+
T Consensus       161 ~~Ygl~RK~----~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lp  236 (293)
T COG2962         161 GLYGLLRKK----LKVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLP  236 (293)
T ss_pred             HHHHHHHHh----cCCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCC
Confidence            999977333    3466665554444444433333333333322111123445667777777766654455556789999


Q ss_pred             hhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhccc
Q 016521          300 AISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLCN  351 (388)
Q Consensus       300 a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~~  351 (388)
                      -.+.++..|++|....+++++++||+++..+....+.+-+|+.+|.+...++
T Consensus       237 ls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~  288 (293)
T COG2962         237 LSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYT  288 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999876543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.77  E-value=5e-16  Score=143.03  Aligned_cols=278  Identities=14%  Similarity=0.149  Sum_probs=206.0

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCCh-HHHHHHHHHHHHHHHHHHHHHccC-----CCCCCC------cccchhHHHHHHHH
Q 016521           69 FNFVVAVSIIFMNKWVLKNIGFQF-PIFLSFIHYAVSWALMAVLNAFAL-----LPASPP------AKSGLLSLFTLGFV  136 (388)
Q Consensus        69 ~~~~~s~~~~~~nK~~~~~~g~~~-p~~l~~~r~~~a~~~l~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~  136 (388)
                      .-.+-..+..+.-|+.-...+.+| |.+..++-=++-.++.........     +..+..      .++.-.++..-++.
T Consensus        22 ~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~i  101 (345)
T KOG2234|consen   22 VLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALI  101 (345)
T ss_pred             HHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHH
Confidence            335566777777787777655554 666655554444443333222221     111111      12222344445677


Q ss_pred             HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc-----------cccc
Q 016521          137 MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD-----------LQFS  205 (388)
Q Consensus       137 ~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~-----------~~~~  205 (388)
                      +++.+.+.+.++.+.+++++|+....-...+++++.+++++|.+++||.++++.+.|+.++-.+.           .+..
T Consensus       102 YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~  181 (345)
T KOG2234|consen  102 YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNP  181 (345)
T ss_pred             HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccch
Confidence            88877799999999999999999999999999999999999999999999999999999886211           2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCccc----ccccchhhHHHHHHHH
Q 016521          206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVL----SFNWNFSNTLAILMSA  281 (388)
Q Consensus       206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~  281 (388)
                      +.|....+.+++.+++-.++.+++.|+.+.+.|........++.++.+......|.....    -.+|+...|..++..+
T Consensus       182 ~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a  261 (345)
T KOG2234|consen  182 FLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNA  261 (345)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHh
Confidence            799999999999999999999999998887777666666677777766666555553331    1245556677777777


Q ss_pred             HHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhcc
Q 016521          282 FLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNLC  350 (388)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~~  350 (388)
                      +.|...++    .+++.+-..-.....+..+++.+.++.+||-++|....+|..+++.++.+|+..+++
T Consensus       262 ~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  262 VGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             ccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            77766544    578888888888888888999999999999999999999999999999999854443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.6e-17  Score=146.00  Aligned_cols=286  Identities=14%  Similarity=0.176  Sum_probs=223.0

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHH
Q 016521           59 RLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQ-FPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFV  136 (388)
Q Consensus        59 ~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~-~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  136 (388)
                      |+.....+....++..+..-....++++..||+ |-+.+|+.|+++-..+-++-.  +.  ....++..|++ ...++.+
T Consensus        40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~--~~--~~~k~r~iP~rtY~~la~~  115 (367)
T KOG1582|consen   40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL--QL--IQTKRRVIPWRTYVILAFL  115 (367)
T ss_pred             hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE--Ee--ecccceecchhHhhhhHhh
Confidence            444445555666777777788889999988998 668999999887543332221  11  11223445555 5556667


Q ss_pred             HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc----cccHHHHHHH
Q 016521          137 MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL----QFSLFGACVA  212 (388)
Q Consensus       137 ~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~----~~~~~G~~~~  212 (388)
                      ...+.++.|-|+.|++-+...+.|++-.+-+++.+.++-|+|+.+.++.+..+..+|.++.+..|.    +++..|+...
T Consensus       116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mI  195 (367)
T KOG1582|consen  116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMI  195 (367)
T ss_pred             hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHH
Confidence            777889999999999999999999999999999999999999999999999999999999988664    5778999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCC-ccccc--ccchhhHHHHHHHHHHHHHHHH
Q 016521          213 LAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPP-GVLSF--NWNFSNTLAILMSAFLGFLLQW  289 (388)
Q Consensus       213 l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~  289 (388)
                      -++.++.|+-...+++..+..+-+..++.+|...++.++++..+....+. ..+.+  +.+........+-+..+++...
T Consensus       196 sgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~  275 (367)
T KOG1582|consen  196 SGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIV  275 (367)
T ss_pred             HHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHH
Confidence            99999999988899988888777788999999988888777666554331 11111  1122233444555555666566


Q ss_pred             HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      +...+++..+|.++..+.+.+..+++++++++|..++|....-|..+++.|+++-.+.+
T Consensus       276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            66778999999999999999999999999999999999999999999999998766655

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.76  E-value=8.9e-16  Score=143.67  Aligned_cols=256  Identities=14%  Similarity=0.089  Sum_probs=178.9

Q ss_pred             HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcc
Q 016521           72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYN  151 (388)
Q Consensus        72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  151 (388)
                      .++..+....|.+.   |++ +..+.  |..++.+++..+....+.++. ..++.....+..|+..+..+.+++.|.+++
T Consensus        11 ~~wGs~g~~~k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~~~~-~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~   83 (290)
T TIGR00776        11 LFWGSFVLINVKIG---GGP-YSQTL--GTTFGALILSIAIAIFVLPEF-WALSIFLVGLLSGAFWALGQINQFKSMRYM   83 (290)
T ss_pred             HHHhhhHHHHhccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhCCcc-cccHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence            33344455556554   577 33333  677777666544332222221 112222224555667788888999999999


Q ss_pred             hhhHHHHHHH-hHHHHHHHHHHHHhccccchhh----HHHHHhhhhheeeeeecccc-------cc-HHHHHHHHHHHHH
Q 016521          152 SVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLK----VITLTAVSIGVAVATVTDLQ-------FS-LFGACVALAWIVP  218 (388)
Q Consensus       152 s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~----~~~l~l~~~Gv~l~~~~~~~-------~~-~~G~~~~l~a~~~  218 (388)
                      +++.+..+.+ ..+++..+.+.+++||+.++++    +++++++++|+.+....+.+       .+ ..|+++++.++++
T Consensus        84 gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~  163 (290)
T TIGR00776        84 GVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIG  163 (290)
T ss_pred             hHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHH
Confidence            9999988887 6667788999999999999999    99999999999887653211       23 6899999999999


Q ss_pred             HHHHHHHHHHhhhccCCCHHHHHHHHhH---HHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 016521          219 SAVNKILWSNLQQRESWTALALMWKTTP---ITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL  295 (388)
Q Consensus       219 ~a~~~i~~~~~~~~~~~~~~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i  295 (388)
                      |+.|.+..|...    .+|++..+.+..   ++...+.+..  .+..     .+.....+.....|++....+...+...
T Consensus       164 y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~Gi~~~ia~~~y~~~~  232 (290)
T TIGR00776       164 YLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH--ILAK-----PLKKYAILLNILPGLMWGIGNFFYLFSA  232 (290)
T ss_pred             HHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH--hccc-----chHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999988652    567766444432   3332222211  1111     1223333333347776655555556777


Q ss_pred             c-cCchhhHHHhhhhhHHHHHHHHHhhcCCCccccch----hhhHHHHHHHHHHH
Q 016521          296 G-ATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSI----CGAFVAIVGMSFYT  345 (388)
Q Consensus       296 ~-~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i----~G~~li~~Gv~ly~  345 (388)
                      + +.++.+++++.+++|+.+++++++++||+.++.++    +|+++++.|+.+-.
T Consensus       233 ~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       233 QPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            8 99999999999999999999999999999999999    99999999997753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.73  E-value=4.1e-17  Score=138.26  Aligned_cols=139  Identities=29%  Similarity=0.447  Sum_probs=125.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhc-----cCCCHHHHHHHHhHHHHHHHHHHHHhcCCCccccccc---------chhh
Q 016521          208 GACVALAWIVPSAVNKILWSNLQQR-----ESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNW---------NFSN  273 (388)
Q Consensus       208 G~~~~l~a~~~~a~~~i~~~~~~~~-----~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~  273 (388)
                      |+++++++.++.|++.++.|+..++     .+.+++++++|+++.+.+.+++...+.|.+.......         +...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999998877     6899999999999999999999988887765322111         2355


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          274 TLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       274 ~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      +..++.+|+.++..+++.+.+++++||+++++++.+|.++++++|+++|||++|..+++|++++++|+++|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7888899999999999999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.73  E-value=4e-17  Score=143.95  Aligned_cols=277  Identities=12%  Similarity=0.069  Sum_probs=200.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHHHHHHHHHhhh
Q 016521           67 LTFNFVVAVSIIFMNKWVLKNIGFQ-FPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLGFVMSFSTGLA  144 (388)
Q Consensus        67 ~~~~~~~s~~~~~~nK~~~~~~g~~-~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  144 (388)
                      +.+.+.+..+..+.-..+.+.  .| --..+|+.|++.-..--+++.  .+...  .+++.|.+ ....-..+...+.++
T Consensus         8 i~~vf~GCcsnvv~lE~L~~~--~pgsgNLITFaqFlFia~eGlif~--skf~~--~k~kiplk~Y~i~V~mFF~vnv~N   81 (330)
T KOG1583|consen    8 ISLVFGGCCSNVVFLELLVRN--EPGSGNLITFAQFLFIATEGLIFT--SKFFT--VKPKIPLKDYAITVAMFFIVNVTN   81 (330)
T ss_pred             HHHHHHhhhchHHHHHHHHHh--CCCCeeehHHHHHHHHHHhceeee--ccccc--cCCCCchhhhheehheeeeeeeec
Confidence            333333333334444444443  11 125788999887655433332  11111  11333333 222333445567899


Q ss_pred             hhhhhc-chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---c---------c---cc---
Q 016521          145 NVSLKY-NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---L---------Q---FS---  205 (388)
Q Consensus       145 ~~al~~-~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~---------~---~~---  205 (388)
                      |.++++ +|++...+.++-.++.+++++++++|+|++.+|+.+++++.+|+.+.+...   .         +   .+   
T Consensus        82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~  161 (330)
T KOG1583|consen   82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFW  161 (330)
T ss_pred             cceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchH
Confidence            999998 899999999999999999999999999999999999999999999987521   1         0   01   


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHH-Hhc---------CCCccccccc-chhh
Q 016521          206 -LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLI-PCL---------DPPGVLSFNW-NFSN  273 (388)
Q Consensus       206 -~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~---------~~~~~~~~~~-~~~~  273 (388)
                       ..|+.+...+.+..|...++++.+.+++.-++-+.++|+...+.+.++... .+.         |.-....... -+..
T Consensus       162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~  241 (330)
T KOG1583|consen  162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM  241 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence             368888899999999999999999999989999999999999887765432 010         1000011111 2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521          274 TLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL  349 (388)
Q Consensus       274 ~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~  349 (388)
                      |..++.+++.-++..-+.+.+-..+++.+++++.+++.-+..+++.+.|++++|+..|+|..+++.|-++|.....
T Consensus       242 ~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~  317 (330)
T KOG1583|consen  242 WVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWN  317 (330)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            7777788777776555667778999999999999999999999999999999999999999999999999976543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.73  E-value=3.9e-16  Score=137.89  Aligned_cols=278  Identities=16%  Similarity=0.199  Sum_probs=202.7

Q ss_pred             HHHHHHHHHHHHHHhh-----ccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC-----------Cc--ccchhHHHH
Q 016521           71 FVVAVSIIFMNKWVLK-----NIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP-----------PA--KSGLLSLFT  132 (388)
Q Consensus        71 ~~~s~~~~~~nK~~~~-----~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~-----------~~--~~~~~~~~~  132 (388)
                      ....+..++..||.=+     ..||..|...+..-++--++.+.++...+.+...+           ..  .-.|...++
T Consensus        12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~   91 (372)
T KOG3912|consen   12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP   91 (372)
T ss_pred             hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence            4455666778888654     34577788777776666666666554443221110           00  112233556


Q ss_pred             HHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc----------
Q 016521          133 LGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL----------  202 (388)
Q Consensus       133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~----------  202 (388)
                      -.++-.....+.|.+|.+++++.+||++.+..+|+.+++.-+++++++.++|+++..+.+|++++...|.          
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~  171 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY  171 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence            6777777778889999999999999999999999999999999999999999999999999998876532          


Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHH-Hhc-----CCCcc-ccccc-chh-h
Q 016521          203 QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLI-PCL-----DPPGV-LSFNW-NFS-N  273 (388)
Q Consensus       203 ~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~-----~~~~~-~~~~~-~~~-~  273 (388)
                      +.-..|+++.+.+-+.-|.+.+..++..++++++|.+...|...++.+.+..+. +..     +...- ..-.| ++. .
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~  251 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDA  251 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHH
Confidence            233679999999999999999999999999999999999999999855543333 221     11100 00001 110 0


Q ss_pred             --------HHHHHHHHHHHH--HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521          274 --------TLAILMSAFLGF--LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSF  343 (388)
Q Consensus       274 --------~~~l~~~~~~~~--~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l  343 (388)
                              ...+...+....  +.|+......+..|+++-.+...+++.+..+++.....|.+...|+.|.++.+.|+++
T Consensus       252 ~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~l  331 (372)
T KOG3912|consen  252 FAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIIL  331 (372)
T ss_pred             HHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    112222222211  2334445567889999999999999999999999999999999999999999999999


Q ss_pred             HHhhh
Q 016521          344 YTYLN  348 (388)
Q Consensus       344 y~~~~  348 (388)
                      |+-.-
T Consensus       332 Y~~il  336 (372)
T KOG3912|consen  332 YNQIL  336 (372)
T ss_pred             HHHHH
Confidence            98543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.71  E-value=6.7e-18  Score=148.08  Aligned_cols=264  Identities=14%  Similarity=0.152  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC-CCcccchhHHHHHHHHHHHHHhhhhhhhh
Q 016521           71 FVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS-PPAKSGLLSLFTLGFVMSFSTGLANVSLK  149 (388)
Q Consensus        71 ~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~  149 (388)
                      ++.+.++.+..|.+.++     |..+.-.|+++-.++..+....++.+.. ++.+|. + ++.-|+.......+.++|++
T Consensus        47 ~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~-~-LiLRg~mG~tgvmlmyya~~  119 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRK-W-LILRGFMGFTGVMLMYYALM  119 (346)
T ss_pred             HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEE-E-EEeehhhhhhHHHHHHHHHh
Confidence            55566665665555443     8888888866665555554333333321 111221 1 22234444445567889999


Q ss_pred             cchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec-----c---------ccccHHHHHHHHHH
Q 016521          150 YNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT-----D---------LQFSLFGACVALAW  215 (388)
Q Consensus       150 ~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~-----~---------~~~~~~G~~~~l~a  215 (388)
                      |.|.+-+.++..++|.++.+++|.++||+.+..+.++..+.+.||+++.-.     +         .+.+..|.+.++.+
T Consensus       120 ~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s  199 (346)
T KOG4510|consen  120 YMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISS  199 (346)
T ss_pred             hcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHh
Confidence            999999999999999999999999999999999999999999999998642     1         12335678888888


Q ss_pred             HHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 016521          216 IVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL  295 (388)
Q Consensus       216 ~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i  295 (388)
                      ++.-|.-.++.+++.|+.  |...-+.|...++.+..++........   ........|+.++..|+.++..++.....+
T Consensus       200 ~lf~asvyIilR~iGk~~--h~~msvsyf~~i~lV~s~I~~~~ig~~---~lP~cgkdr~l~~~lGvfgfigQIllTm~l  274 (346)
T KOG4510|consen  200 VLFGASVYIILRYIGKNA--HAIMSVSYFSLITLVVSLIGCASIGAV---QLPHCGKDRWLFVNLGVFGFIGQILLTMGL  274 (346)
T ss_pred             HhhhhhHHHHHHHhhccc--cEEEEehHHHHHHHHHHHHHHhhccce---ecCccccceEEEEEehhhhhHHHHHHHHHh
Confidence            888777777777776653  343344455555544433332222211   112233456777778888998888887776


Q ss_pred             ccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      ++--|-..++..+..-+++.++.+++|||.+|+++++|+++++.+..+-..
T Consensus       275 QiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  275 QIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             hhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            666666678888999999999999999999999999999999988866543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.71  E-value=8.1e-15  Score=128.07  Aligned_cols=249  Identities=14%  Similarity=0.067  Sum_probs=181.6

Q ss_pred             HHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHH
Q 016521           80 MNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMA  159 (388)
Q Consensus        80 ~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il  159 (388)
                      +.|-+|-.  +. |.-.+.+|..++.+++..+.+-.+   .+..+++...+...|...+..+.+.|.|++.+|.+.+..+
T Consensus        30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAi  103 (292)
T COG5006          30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAI  103 (292)
T ss_pred             HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhh
Confidence            34667766  33 889999999999998876643322   2234555556777888888889999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc---ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 016521          160 KIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD---LQFSLFGACVALAWIVPSAVNKILWSNLQQRESWT  236 (388)
Q Consensus       160 ~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~  236 (388)
                      -.+-|+.+.+++    .+|..-.-|  +.+.+.|+.+.....   .+.|+.|..+++++..||+.|.+..||.-+..  +
T Consensus       104 EF~GPL~vA~~~----sRr~~d~vw--vaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~  175 (292)
T COG5006         104 EFTGPLAVALLS----SRRLRDFVW--VALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAE--H  175 (292)
T ss_pred             hhccHHHHHHHh----ccchhhHHH--HHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC--C
Confidence            999999888754    255444444  445556765554322   45789999999999999999999998887432  2


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHH-HHHhccCchhhHHHhhhhhHHHHH
Q 016521          237 ALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSG-ALALGATSAISHVVLGQFKTCIIL  315 (388)
Q Consensus       237 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~i~~~~a~~~sv~~~l~~v~~~  315 (388)
                      .-+-+..-..++.+..+|+.....++..    +++.....-+..++++...-|+. ...+++.++-+++++..++|.++.
T Consensus       176 g~~g~a~gm~vAaviv~Pig~~~ag~~l----~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aA  251 (292)
T COG5006         176 GTAGVAVGMLVAALIVLPIGAAQAGPAL----FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAA  251 (292)
T ss_pred             CchHHHHHHHHHHHHHhhhhhhhcchhh----cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHH
Confidence            3344445555666555555432222221    23444444455566666555554 678999999999999999999999


Q ss_pred             HHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          316 LGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       316 ~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      +.|++++||.+|+.||+|++.++.+..-.++
T Consensus       252 l~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         252 LSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999999999998865443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.70  E-value=1.4e-15  Score=138.00  Aligned_cols=208  Identities=17%  Similarity=0.205  Sum_probs=166.5

Q ss_pred             cchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc--
Q 016521          125 SGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL--  202 (388)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~--  202 (388)
                      ++.+.+..-++++.+.+.+.+.++++++++++|+++.+..+++++++++++|+|++.+||.++++.++|+.++..++.  
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            344455555888999999999999999999999999999999999999999999999999999999999998865321  


Q ss_pred             ---------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc-
Q 016521          203 ---------------QFSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLS-  266 (388)
Q Consensus       203 ---------------~~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-  266 (388)
                                     +....|+++.+.++++.++..++.++..|+.+.+.+........+++++.++...+.|.....+ 
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~  174 (244)
T PF04142_consen   95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES  174 (244)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence                           1135899999999999999999999999988877777766677777777666654444322211 


Q ss_pred             ---cccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHH
Q 016521          267 ---FNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFV  336 (388)
Q Consensus       267 ---~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~l  336 (388)
                         ..|+...|..+...++.|...    -..+|+.+...-+....+..+++.+.++++||.++|....+|..+
T Consensus       175 g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  175 GFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             CchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence               134444455555555555443    346899999999999999999999999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.59  E-value=1.8e-15  Score=132.07  Aligned_cols=264  Identities=16%  Similarity=0.153  Sum_probs=195.7

Q ss_pred             HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcc
Q 016521           72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYN  151 (388)
Q Consensus        72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  151 (388)
                      .+..+..+.+..+-.+ |.+-|...+++.+..-+++-.++...|+ +..   +..+.+.+.++++-.-.+.+-..|.||+
T Consensus        28 L~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~---~~~~~hYilla~~DVEaNy~vV~AyQyT  102 (336)
T KOG2766|consen   28 LLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR-KYI---KAKWRHYILLAFVDVEANYFVVKAYQYT  102 (336)
T ss_pred             HHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHH---HHHHHHhhheeEEeecccEEEeeehhhc
Confidence            3445555666666554 5777888898888877776655554443 111   1111224445555444455556799999


Q ss_pred             hhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc--------cccHHHHHHHHHHHHHHHHHH
Q 016521          152 SVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL--------QFSLFGACVALAWIVPSAVNK  223 (388)
Q Consensus       152 s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~a~~~  223 (388)
                      +....+++-+-..|.+++++|+++|.|+++.++.|++++..|++++.+.|.        +....|+++.++++-+||+.+
T Consensus       103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSN  182 (336)
T KOG2766|consen  103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSN  182 (336)
T ss_pred             chHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeecc
Confidence            999999999888999999999999999999999999999999999887552        344689999999999999999


Q ss_pred             HHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHhccCchhhH
Q 016521          224 ILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALALGATSAISH  303 (388)
Q Consensus       224 i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~  303 (388)
                      +..+.+.|+  .+..+++....+++++.-.+- ++.|.......+|++.....+. .+++-++..-..-.+++..|++..
T Consensus       183 v~EEflvkn--~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~  258 (336)
T KOG2766|consen  183 VSEEFLVKN--ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMF  258 (336)
T ss_pred             ccHHHHHhc--CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEE
Confidence            999888865  678999999999988887776 5566665555667643222222 333333322222356899999999


Q ss_pred             HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          304 VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       304 sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      ++...-....++++  ..||-+.+|.-.+..+.+..|..+|..
T Consensus       259 nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  259 NLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             EhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            98888888888887  788999999999999999999999843

>TIGR00803 nst UDP-galactose transporter

Probab=99.30  E-value=9.2e-12  Score=112.19  Aligned_cols=189  Identities=13%  Similarity=0.123  Sum_probs=120.2

Q ss_pred             hhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheee--------------------eeeccc-------cc
Q 016521          152 SVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAV--------------------ATVTDL-------QF  204 (388)
Q Consensus       152 s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l--------------------~~~~~~-------~~  204 (388)
                      +++.....++..++++++..+.+.++|++..++++.++...|+..                    ...++.       +.
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~   82 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN   82 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence            455566666666666666666666666666666666666666543                    222211       23


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccc----cccchhhHHHHHHH
Q 016521          205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLS----FNWNFSNTLAILMS  280 (388)
Q Consensus       205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~l~~~  280 (388)
                      .+.|....+.++.+.++-.+++++..|+++...+.......+++.+.........+......    ..++...|..+...
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLN  162 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHH
Confidence            46788888888888899999999887665543333333333333332211111111111111    11222223333222


Q ss_pred             HHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521          281 AFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly  344 (388)
                      +    ..+.+..+.+++.++++.++...++++++.++++++|||+++..++.|+.+++.|+++|
T Consensus       163 a----~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       163 V----GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             H----hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2    23334667899999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.12  E-value=2.1e-10  Score=93.06  Aligned_cols=119  Identities=18%  Similarity=0.217  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCC-CCCCcccchhHHHHHHHH-HHHHHhhhhhhhhcch
Q 016521           75 VSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLP-ASPPAKSGLLSLFTLGFV-MSFSTGLANVSLKYNS  152 (388)
Q Consensus        75 ~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s  152 (388)
                      ......+|...++  +| |...+++|+.++.+ +.++......+ ....+++........+.+ .+.+..+.+.++++++
T Consensus         4 a~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    4 AIYSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eeHHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            3446778888887  77 99999999999997 44433333222 122333333344444544 5778889999999999


Q ss_pred             hhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521          153 VGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA  197 (388)
Q Consensus       153 ~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~  197 (388)
                      ++..+++.++.|+++++++++++||+++++++.++++++.|+.++
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.08  E-value=1.9e-09  Score=84.88  Aligned_cols=125  Identities=17%  Similarity=0.088  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC--CcccchhHHHHHHHHHHHHHhhhhhhhh
Q 016521           72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP--PAKSGLLSLFTLGFVMSFSTGLANVSLK  149 (388)
Q Consensus        72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~al~  149 (388)
                      +++....++.|..+++  .+ |.+-++.|.++....+..+....+.....  ..++.+..+...|+..++++.+++.|++
T Consensus        13 ~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk   89 (140)
T COG2510          13 LFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALK   89 (140)
T ss_pred             HHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHh
Confidence            3344447888999986  66 99999999998888776655444322221  2344444466778889999999999999


Q ss_pred             cchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521          150 YNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       150 ~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~  199 (388)
                      .-.+|...-+..++|.++++++++++|||++..+|++++++.+|+.+++.
T Consensus        90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999988753

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.04  E-value=1.5e-09  Score=87.92  Aligned_cols=124  Identities=19%  Similarity=0.170  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH-HHHHHHHHHHHh
Q 016521          217 VPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFL-GFLLQWSGALAL  295 (388)
Q Consensus       217 ~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~i  295 (388)
                      ++||.+.+..|+..++  .++.....+....+.+ +++...+.+...  ...++...+......+++ ....+...+..+
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            3678889998888765  7899999999988887 555555544332  123344455555555555 355566677899


Q ss_pred             ccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      ++.++...++..+++|+++.++++++++|++++.+++|+++++.|+.+.+
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.01  E-value=3.6e-09  Score=83.37  Aligned_cols=133  Identities=15%  Similarity=0.023  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 016521          209 ACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ  288 (388)
Q Consensus       209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  288 (388)
                      .++++++++.+++..++.|--.+  ++||...+..-+.+..++++............ ...+...|..++++|+.+....
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHHHHHHHH
Confidence            57899999999999999886664  46676665556666555555544433332221 1245677888899997777766


Q ss_pred             HHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521          289 WSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       289 ~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly  344 (388)
                      +++|.+++...+..+..+.-..++++++++++++||++|..+++|+.++.+|..+-
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            77789999999999999999999999999999999999999999999999998653

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.98  E-value=4.6e-08  Score=88.85  Aligned_cols=208  Identities=11%  Similarity=0.041  Sum_probs=149.8

Q ss_pred             cchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhH----HHHHhhhhheeeeee
Q 016521          125 SGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKV----ITLTAVSIGVAVATV  199 (388)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~----~~l~l~~~Gv~l~~~  199 (388)
                      +..+..+..|++.+....+++.|+++..+|.+.-+. ..+.+.+.+.+.++|+|-.+..++    ++++++++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            444447778999999999999999998887766554 345566889999999997776664    488899999998887


Q ss_pred             cccc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccch
Q 016521          200 TDLQ--------FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF  271 (388)
Q Consensus       200 ~~~~--------~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  271 (388)
                      .|.+        ....|+...+.+.+.|..|.++.+.    .+.++++...-++.-..+..+++.... ....    .+.
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~----~~k  193 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFS-KKPF----FEK  193 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhcc-cccc----ccc
Confidence            5532        2256999999999999999998665    347788877655433332222222222 1111    111


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCcccc----chhhhHHHHHHHH
Q 016521          272 SNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTT----SICGAFVAIVGMS  342 (388)
Q Consensus       272 ~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~----~i~G~~li~~Gv~  342 (388)
                      ..|. =+..|++....+++.+...+..+..+.=.+..+..+++.+.|.++++|+=+..    .++|.++++.|..
T Consensus       194 ~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  194 KSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             chHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            2222 24566666677777888888999999999999999999999999999998765    4568887777764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.91  E-value=6.2e-09  Score=88.08  Aligned_cols=210  Identities=11%  Similarity=0.019  Sum_probs=153.4

Q ss_pred             HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeeccc--cccHH
Q 016521          130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDL--QFSLF  207 (388)
Q Consensus       130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~--~~~~~  207 (388)
                      ..|.+++....+..+..+++.++++.++.+..+.-.|+-+++++.+|+|+...++++.+++..|+++..+.|.  ..++.
T Consensus        56 taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~i  135 (290)
T KOG4314|consen   56 TAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEII  135 (290)
T ss_pred             ecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhh
Confidence            4455556666666777899999999999999999999999999999999999999999999999999998664  46799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHH-----HH-hc--CCCcccccccchhhHHHHHH
Q 016521          208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSL-----IP-CL--DPPGVLSFNWNFSNTLAILM  279 (388)
Q Consensus       208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~-----~~-~~--~~~~~~~~~~~~~~~~~l~~  279 (388)
                      |+.++++++...|+|.+..|+....-+..  +...+++..+.+-+...     .. +.  |+.+  ++  ....|..+..
T Consensus       136 Gi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~q--sF--A~~PWG~l~G  209 (290)
T KOG4314|consen  136 GIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQ--SF--AAAPWGCLCG  209 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHH--HH--hhCCchhhhh
Confidence            99999999999999999999887554332  22333333222211111     11 11  2211  11  1123445555


Q ss_pred             HHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          280 SAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      .+.++...++.....+..+.|...|+-..+..+.......++-+-..+...+.|..++..|..+..
T Consensus       210 ~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLii  275 (290)
T KOG4314|consen  210 AAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILII  275 (290)
T ss_pred             HHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhee
Confidence            555555555555555777888888888778888888888887777788999999999999987754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.89  E-value=4.8e-09  Score=83.99  Aligned_cols=105  Identities=14%  Similarity=0.128  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHHHHccCCC-C-CCCcccchh-HHHHHHHHHH-HHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHH
Q 016521           98 FIHYAVSWALMAVLNAFALLP-A-SPPAKSGLL-SLFTLGFVMS-FSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFI  173 (388)
Q Consensus        98 ~~r~~~a~~~l~~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~~-~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~  173 (388)
                      .+|+..+.+.+..+...+++. . .+..++.++ .....|+... .+..+.++|+++.+ +....+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            467888877776654433211 1 111122222 3444455544 77889999999999 58889999999999999999


Q ss_pred             HhccccchhhHHHHHhhhhheeeeeecccc
Q 016521          174 CYRKRVSVLKVITLTAVSIGVAVATVTDLQ  203 (388)
Q Consensus       174 ~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~  203 (388)
                      ++|||++++++.+++++++|++++..+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999998877654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.78  E-value=1.5e-07  Score=88.63  Aligned_cols=139  Identities=12%  Similarity=-0.018  Sum_probs=105.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCccccccc-chhhHHHHHHHHH
Q 016521          204 FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNW-NFSNTLAILMSAF  282 (388)
Q Consensus       204 ~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~  282 (388)
                      ....|.++.+++++.|+...+..|..   .+++|.++..+...++.+.+++............... +...+......++
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~---~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI---YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            34579999999999999999998754   2488999999999998876665543322111100001 2223333334444


Q ss_pred             HHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          283 LGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       283 ~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      .....+.+.++.++++++..+++..+..|++..++++++++|+++..+++|+++.+.|+.+..
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            444556677889999999999999999999999999999999999999999999999998754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.69  E-value=6.3e-07  Score=82.51  Aligned_cols=124  Identities=13%  Similarity=0.027  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHH-HHHHHhhhhhh
Q 016521           69 FNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFV-MSFSTGLANVS  147 (388)
Q Consensus        69 ~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a  147 (388)
                      ...+++....+..|...++.+.+ +..+..+++.++.+++.++......+. ..+.+.....+..+++ ......+++++
T Consensus       135 ~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (260)
T TIGR00950       135 GSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKG  212 (260)
T ss_pred             HHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555567778877664433 455666788888887776654433222 2222232234444444 45677889999


Q ss_pred             hhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhhe
Q 016521          148 LKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGV  194 (388)
Q Consensus       148 l~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv  194 (388)
                      +++.+++..+++.++.|++.+++++++++|+++..++.|++++++|+
T Consensus       213 ~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       213 LTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999986

>TIGR00688 rarD rarD protein

Probab=98.67  E-value=5.6e-07  Score=82.81  Aligned_cols=136  Identities=10%  Similarity=0.007  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcc--cccc-cch-hhHHHHHHHHH
Q 016521          207 FGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGV--LSFN-WNF-SNTLAILMSAF  282 (388)
Q Consensus       207 ~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~--~~~~-~~~-~~~~~l~~~~~  282 (388)
                      .|.++.++++++|+...+..|.. .  +++|.++.++-..++.+.+++..........  .... .+. ..+..+...++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            48889999999999999998873 2  4899999999999887776554433221100  0001 111 12334556666


Q ss_pred             HHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          283 LGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       283 ~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      +......+.++.++++++..+++..+..|+++.++++++++|+++..+++|+++.++|+.+-.
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            655666677889999999999999999999999999999999999999999999999987643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.59  E-value=1.2e-06  Score=81.90  Aligned_cols=133  Identities=11%  Similarity=0.031  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 016521          209 ACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ  288 (388)
Q Consensus       209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  288 (388)
                      +++.+++++++|.+.+..|+..+++  ++.  ..+....+.+.++++.........+. ..+...+..+..+++......
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQVGWS-RLPATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhcccCCCC-CcchhhHHHHHHHHHHHHHHH
Confidence            5688999999999999999776542  232  34444555555555443321111111 011223445556666666667


Q ss_pred             HHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          289 WSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       289 ~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      .+.+...++.++...+++.+..|+++.+++++++||+++..+++|+++++.|+++-..
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            7778889999999999999999999999999999999999999999999999977543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.42  E-value=5.7e-06  Score=79.62  Aligned_cols=137  Identities=11%  Similarity=0.129  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521          208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL  287 (388)
Q Consensus       208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  287 (388)
                      -.+..++.-++|+.+.++.|...+ ..++|..+..+-..++.++++++....+...... ..+...+..+.+.+++++..
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~-~~~~~~~~~l~l~g~~g~~~   91 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP-PLSVSILSKIGLLGFLGSMY   91 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHHH
Confidence            345566777899999999998885 4689999999988888888777765443211101 11233455566666666555


Q ss_pred             HHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhh------cCCCccccchhhhHHHHHHHHHHHh
Q 016521          288 QWSGALALGATSAISHVVLGQFKTCIILLGNYYI------FGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       288 ~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~------~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      +...+..+++++|..++++.+..|+++.++++++      ++|+++..+++|+++.++|+.+-..
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            5567788999999999999999999999999999      6999999999999999999987553

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.24  E-value=1.4e-05  Score=63.54  Aligned_cols=64  Identities=14%  Similarity=0.033  Sum_probs=58.2

Q ss_pred             HHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          135 FVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       135 ~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      +.++.+..+...+++..|+|.+..+-++.++++++++++++|||++++++++++++++|+.++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4466677888899999999999999999999999999999999999999999999999987653

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.21  E-value=2.7e-05  Score=70.65  Aligned_cols=140  Identities=14%  Similarity=0.055  Sum_probs=106.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcc-cccccchhhHHHHHHHHHH
Q 016521          205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGV-LSFNWNFSNTLAILMSAFL  283 (388)
Q Consensus       205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~  283 (388)
                      +..|+++++.+-+.|+.--.+.|.+.   +.++.+...+-...+.++.+.+..+...... .+..-++..+..+..+++.
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            45799999999999999888888765   4678899999988888877666555433221 1111223344444444443


Q ss_pred             HHHHHHHHH-HHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          284 GFLLQWSGA-LALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       284 ~~~~~~~~~-~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      - ..|+..| |.+.+-....+|.-.+++|.+.+++|.++++|+++..|++..+++.+|+..-.+..
T Consensus        82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            3 3466555 78999999999999999999999999999999999999999999999998766653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.20  E-value=6.4e-05  Score=72.41  Aligned_cols=138  Identities=7%  Similarity=-0.023  Sum_probs=103.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH
Q 016521          205 SLFGACVALAWIVPSAVNKILWSNLQQRESWT-ALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFL  283 (388)
Q Consensus       205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  283 (388)
                      ++.-.++++.+-.+...+.+..|.....  .+ |+.+..++..++.+...++... ..............+..++..|++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLC  123 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence            4555667777777778888888888765  56 9999999998886654444321 111111111012245566677777


Q ss_pred             HHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          284 GFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       284 ~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      ........+..++.+++..++++-...|++++++++++++|+++..+++|++++++|+.+-.
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            76666666778899999999999999999999999999999999999999999999998755

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.18  E-value=5.8e-05  Score=63.48  Aligned_cols=126  Identities=15%  Similarity=0.174  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHhhc-----cCCChHHHHHHHHHHHHHHHHHHHHHccCCCCC-----CCc------c-cchhHHHHHH
Q 016521           72 VVAVSIIFMNKWVLKN-----IGFQFPIFLSFIHYAVSWALMAVLNAFALLPAS-----PPA------K-SGLLSLFTLG  134 (388)
Q Consensus        72 ~~s~~~~~~nK~~~~~-----~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~-----~~~------~-~~~~~~~~~~  134 (388)
                      +....-.++.|..+++     .+.+ |..+..+....+.+++.+.....+.+..     ...      . +....++..+
T Consensus        10 ~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (153)
T PF03151_consen   10 LFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG   88 (153)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH
Confidence            3334445566666666     5677 8888888888888877766443322221     000      1 1122255666


Q ss_pred             HHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          135 FVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       135 ~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      +.....+...++.++++++-+++++.....+++.++++++++|+++..++.|++++++|+.+-+
T Consensus        89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            7777778888999999999999999999999999999999999999999999999999987654

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.12  E-value=4.7e-05  Score=71.62  Aligned_cols=69  Identities=13%  Similarity=0.043  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      ++..++..++...++++++++.+++..++..+..|++.+++++++++|+++..+++|.++++.|+.+..
T Consensus       218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            444455556678899999999999999999999999999999999999999999999999999986654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.10  E-value=3.3e-05  Score=72.45  Aligned_cols=64  Identities=8%  Similarity=0.096  Sum_probs=57.3

Q ss_pred             HHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521          136 VMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       136 ~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~  199 (388)
                      .++++..++..|+.+.|.+..+-+.+...++.++++.+++|||++++++.|++++++|..++..
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            3556667888999999999999999999999999999999999999999999999999876543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.10  E-value=0.00012  Score=69.05  Aligned_cols=130  Identities=8%  Similarity=0.001  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHH
Q 016521          211 VALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWS  290 (388)
Q Consensus       211 ~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  290 (388)
                      +.+.+-.+...++++.|...+.. ..|..+...+..++.+.+.+... ......  ...+...+..+...|++.......
T Consensus         6 ~~~~w~~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~   81 (302)
T TIGR00817         6 LFGLWYFLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSWS-SGLPKR--LKISSALLKLLLPVAIVHTIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHHH-hCCCCC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            33444455556667778777542 45788888887776655444311 111111  122344566666666666555666


Q ss_pred             HHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521          291 GALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       291 ~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly  344 (388)
                      .+..++++++..++++....|+++.++++++++|+++..+++|.+++++|+.+.
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            778899999999999999999999999999999999999999999999999764

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.10  E-value=7e-05  Score=70.36  Aligned_cols=122  Identities=10%  Similarity=0.044  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHH-HHHHHhhhhhhhhc
Q 016521           72 VVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFV-MSFSTGLANVSLKY  150 (388)
Q Consensus        72 ~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~  150 (388)
                      +++....+..|...++  .+ |...+ +...++.+++.++...... ....+.......+..+++ ..+...++++++++
T Consensus       158 ~~~a~~~v~~r~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~  232 (293)
T PRK10532        158 ACWAIYILSGQRAGAE--HG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTR  232 (293)
T ss_pred             HHHHHHHHHHHHHhcc--CC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3334445556666554  34 55554 4445555555444333221 111122221123344444 45567789999999


Q ss_pred             chhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          151 NSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       151 ~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      ++++.+++..++.|++.+++++++++|+++..+++|.+++++|+....
T Consensus       233 ~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        233 LPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             cChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998876653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.05  E-value=4e-05  Score=61.19  Aligned_cols=74  Identities=14%  Similarity=0.203  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          274 TLAILMSAFLGF-LLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       274 ~~~l~~~~~~~~-~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      +..++..|+++. ..+...++..++.++ .+++...+.|+++.++++++++|+++..+++|.+++++|+.+-.+.+
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            444455555554 445556678888885 77789999999999999999999999999999999999999877654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.04  E-value=8.8e-05  Score=69.64  Aligned_cols=107  Identities=12%  Similarity=0.045  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCC-CCCcccchhHHHHHHHH-HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHH
Q 016521           93 PIFLSFIHYAVSWALMAVLNAFALLPA-SPPAKSGLLSLFTLGFV-MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLA  170 (388)
Q Consensus        93 p~~l~~~r~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~  170 (388)
                      +...+.+++.++..++.++......+. ..++.+....+...+++ ......++++++++.+++..+++....|++.+++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~  256 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL  256 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            456678888888777766544332211 11122222234444443 4566789999999999999999999999999999


Q ss_pred             HHHHhccccchhhHHHHHhhhhheeeeee
Q 016521          171 EFICYRKRVSVLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       171 ~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~  199 (388)
                      +++++||+++..++.|.++++.|+.+...
T Consensus       257 ~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        257 GTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999877644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.94  E-value=0.00036  Score=56.87  Aligned_cols=118  Identities=15%  Similarity=0.147  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH
Q 016521          207 FGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFL  286 (388)
Q Consensus       207 ~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  286 (388)
                      .|.++.+.+.++.+...++.|+-.++..  ..+...     ... ..... ..          ++   ...++.++.++.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~-----~~~-~~~~~-~~----------~p---~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAW-----DFI-AALLA-FG----------LA---LRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC--Cccchh-----HHH-HHHHH-Hh----------cc---HHHHHHHHHHHH
Confidence            3778888888888888888886654432  111000     000 00000 00          11   113344444444


Q ss_pred             HHH-HHHHHhccCchhhHHHhhhhhHHHHHHHHHh--hcCCCccccchhhhHHHHHHHHHHHh
Q 016521          287 LQW-SGALALGATSAISHVVLGQFKTCIILLGNYY--IFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       287 ~~~-~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l--~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      ..+ .....+++.++..+.....+.++...+.++.  +|||++|+.+++|++++++|+.+.+.
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            443 4456889999999998888888777777774  89999999999999999999988653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.88  E-value=0.00028  Score=66.42  Aligned_cols=70  Identities=14%  Similarity=0.125  Sum_probs=59.9

Q ss_pred             HHHHHHH-HHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521          130 LFTLGFV-MSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       130 ~~~~~~~-~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~  199 (388)
                      ++..+++ ..+...+++.++++.+++..+++....|++.+++++++++|+++..+++|.+++++|+.+...
T Consensus       217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            4444443 455677889999999999999999999999999999999999999999999999999876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.87  E-value=0.0053  Score=58.38  Aligned_cols=218  Identities=12%  Similarity=-0.005  Sum_probs=130.5

Q ss_pred             hHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhcccc---c----hhhHHHHHhhhhheeeeee
Q 016521          128 LSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRV---S----VLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~---~----~~~~~~l~l~~~Gv~l~~~  199 (388)
                      ...+..|++.+..+.++..+.+++.+|...-+. ..+.++..++..++++|=.   +    ..-.++++++++|+++...
T Consensus        74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            336667888888888999999998887776544 3455667788888887532   2    2346788899999988776


Q ss_pred             ----ccc---------cccHHHHHHHHHHHHHHHHHH-------HHHHHhhhccCCCHHHHHHHHhH---HHHHHHHHHH
Q 016521          200 ----TDL---------QFSLFGACVALAWIVPSAVNK-------ILWSNLQQRESWTALALMWKTTP---ITLLFLGSLI  256 (388)
Q Consensus       200 ----~~~---------~~~~~G~~~~l~a~~~~a~~~-------i~~~~~~~~~~~~~~~l~~~~~~---~~~~~l~~~~  256 (388)
                          .|.         .....|+++++.+.+.++.|.       ...+... ....++.....-+..   .+.+..-...
T Consensus       154 Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~  232 (345)
T PRK13499        154 AGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGF  232 (345)
T ss_pred             hhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence                332         123689999999999999999       3332221 123445443333332   2332222111


Q ss_pred             Hh----c-CCCc-ccccccc----hhhHHHHHHHHHHHHHHHHHHHHHhccCchhh----HHHhhhhhHHHHHHHHHhhc
Q 016521          257 PC----L-DPPG-VLSFNWN----FSNTLAILMSAFLGFLLQWSGALALGATSAIS----HVVLGQFKTCIILLGNYYIF  322 (388)
Q Consensus       257 ~~----~-~~~~-~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~----~sv~~~l~~v~~~~~~~l~~  322 (388)
                      ..    . +... ..+...+    ..+...-.+.|+..+..++.....-++.+...    ..+...+.-+++.+.|. ++
T Consensus       233 ~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~l  311 (345)
T PRK13499        233 CFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VL  311 (345)
T ss_pred             HHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hh
Confidence            11    1 1111 1111111    12333334555555555555544444443332    22444666688889998 59


Q ss_pred             CCCcc------ccchhhhHHHHHHHHHHHhh
Q 016521          323 GANPG------TTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       323 ge~~t------~~~i~G~~li~~Gv~ly~~~  347 (388)
                      +|.=+      ...++|.++++.|..+-.+.
T Consensus       312 kE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        312 KEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            99877      57789999999998775543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.73  E-value=0.00033  Score=65.66  Aligned_cols=130  Identities=15%  Similarity=0.091  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521          208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL  287 (388)
Q Consensus       208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  287 (388)
                      |+++++.++++|+...+..|+..   +.++.+...  ..++...+.........+..    .....+..-..+|+.....
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~~~----~~~~~~~~g~l~G~~w~ig   72 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLPEF----WALSIFLVGLLSGAFWALG   72 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCCcc----cccHHHHHHHHHHHHHHhh
Confidence            67899999999999999988764   345555442  23333333332222222211    1233344455666666677


Q ss_pred             HHHHHHHhccCchhhHHHhhh-hhHHHHHHHHHhhcCCCccccc----hhhhHHHHHHHHHHHh
Q 016521          288 QWSGALALGATSAISHVVLGQ-FKTCIILLGNYYIFGANPGTTS----ICGAFVAIVGMSFYTY  346 (388)
Q Consensus       288 ~~~~~~~i~~~~a~~~sv~~~-l~~v~~~~~~~l~~ge~~t~~~----i~G~~li~~Gv~ly~~  346 (388)
                      +++++..+++++...+..+.+ +.++...+++.++|+|..+..+    ++|.++++.|+.+...
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~  136 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR  136 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence            888899999999999877777 8888999999999999999999    9999999999977643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.60  E-value=0.0014  Score=61.89  Aligned_cols=127  Identities=17%  Similarity=0.143  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHhhhccCCC--HHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 016521          218 PSAVNKILWSNLQQRESWT--ALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQWSGALAL  295 (388)
Q Consensus       218 ~~a~~~i~~~~~~~~~~~~--~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i  295 (388)
                      ++..+.+.++++.++....  +..+++.|.....+...+.........     .+...+.-....+++..+........+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-----SRKIPLKKYAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-----CCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            3446778888887666555  777777777766655444433332111     111123333444555556666777889


Q ss_pred             ccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhhc
Q 016521          296 GATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLNL  349 (388)
Q Consensus       296 ~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~~  349 (388)
                      ++.+..+..+.-..+++.++++++++++++.+..++++.+++.+|++.....+.
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~  139 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS  139 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence            999999999999999999999999999999999999999999999999876543

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.53  E-value=0.00026  Score=57.65  Aligned_cols=67  Identities=13%  Similarity=0.088  Sum_probs=57.9

Q ss_pred             HHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHH--HhccccchhhHHHHHhhhhheeeeeec
Q 016521          134 GFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFI--CYRKRVSVLKVITLTAVSIGVAVATVT  200 (388)
Q Consensus       134 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~--~l~e~~~~~~~~~l~l~~~Gv~l~~~~  200 (388)
                      -++++++..+++.+++..+++.+.-+.+..+.++++.++.  ++||++++.+++|++++++|+.++..+
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            3456677889999999999999999988888788887774  899999999999999999999887653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.51  E-value=0.00065  Score=53.94  Aligned_cols=54  Identities=13%  Similarity=0.113  Sum_probs=49.0

Q ss_pred             HHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521          291 GALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       291 ~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly  344 (388)
                      ....+++.+...+.....+.++.+.++|+++|||++++.+++|++++++|+.+-
T Consensus        54 ~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         54 WLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            345788999999988888999999999999999999999999999999999764

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.50  E-value=0.0047  Score=57.21  Aligned_cols=138  Identities=20%  Similarity=0.103  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH
Q 016521          206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGF  285 (388)
Q Consensus       206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  285 (388)
                      ..+....+.+.+.|+......+...+. ..++............+...+... .+.........  ..+..++..++...
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~   81 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRPALR--PWLLLLLLALLGLA   81 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHH-hhccccccccc--chHHHHHHHHHHHH
Confidence            456677777778888888887766543 234445444444444444222221 11100111111  12334444444555


Q ss_pred             HHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHH-hhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521          286 LLQWSGALALGATSAISHVVLGQFKTCIILLGNY-YIFGANPGTTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       286 ~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~-l~~ge~~t~~~i~G~~li~~Gv~ly~~~  347 (388)
                      ......+..++++++..+++.....|++..++++ ++++|+++..++.|..+.+.|+.+-...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~  144 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG  144 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecC
Confidence            5556667789999999999999999999999997 7779999999999999999999886543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.43  E-value=0.0036  Score=59.43  Aligned_cols=76  Identities=16%  Similarity=0.151  Sum_probs=67.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          273 NTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       273 ~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      .|+.-++.+++-...++......++++.+.++++.+...+++.++++++++++.++.+++|++++++|+.+-....
T Consensus        78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            3444455578888889999999999999999999999999999999999999999999999999999998765543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.36  E-value=0.0034  Score=57.94  Aligned_cols=65  Identities=5%  Similarity=0.080  Sum_probs=58.7

Q ss_pred             HHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521          135 FVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       135 ~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~  199 (388)
                      +.+.++...++.|+.|.|.+..+-+.+++.++.++++..+++||+++...+|++++++|-.++..
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            34667777889999999999999999999999999999999999999999999999999876654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.35  E-value=0.0007  Score=54.21  Aligned_cols=69  Identities=16%  Similarity=0.158  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec
Q 016521          132 TLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT  200 (388)
Q Consensus       132 ~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~  200 (388)
                      ...++++.+..+...+++++|++.+..+- ....+.+++.+++++||++++.+++++.++++|+.++...
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            34555667777888999999999887774 5677888999999999999999999999999999877543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.26  E-value=0.0095  Score=49.20  Aligned_cols=130  Identities=16%  Similarity=0.144  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 016521          209 ACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLLQ  288 (388)
Q Consensus       209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  288 (388)
                      .++++.+.+.-+++..+..++.++.. +|+.........+.+.+.....+.+.+...  ......|+. ..+|+++...-
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~~--~~~~~p~w~-~lGG~lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSLA--SLSSVPWWA-YLGGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhcccccc--hhccCChHH-hccHHHHHHHH
Confidence            56777888888888888888776543 588888777777777766666555543221  112222333 34777777777


Q ss_pred             HHHHHHhccCchhhHHHhhhhhHHH-HHHHHHh-hc---CCCccccchhhhHHHHHHHH
Q 016521          289 WSGALALGATSAISHVVLGQFKTCI-ILLGNYY-IF---GANPGTTSICGAFVAIVGMS  342 (388)
Q Consensus       289 ~~~~~~i~~~~a~~~sv~~~l~~v~-~~~~~~l-~~---ge~~t~~~i~G~~li~~Gv~  342 (388)
                      .+....+.+.++.........-.++ +.+++.+ .|   .+++++.+++|.++++.|+.
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence            7777888999999988877666644 4566665 33   46789999999999999985

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.21  E-value=0.0011  Score=52.25  Aligned_cols=67  Identities=18%  Similarity=0.144  Sum_probs=55.4

Q ss_pred             HHHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeee
Q 016521          133 LGFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATV  199 (388)
Q Consensus       133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~  199 (388)
                      ..++++.+..+...+++.+|++.+..+-. ...+.+++.+++++||++++.+++++.++++|+.++..
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34455666677788999999999887743 56677889999999999999999999999999987754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.05  E-value=0.00018  Score=63.64  Aligned_cols=212  Identities=14%  Similarity=0.086  Sum_probs=139.3

Q ss_pred             ccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhh----HHHHHhhhhheeeee
Q 016521          124 KSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLK----VITLTAVSIGVAVAT  198 (388)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~----~~~l~l~~~Gv~l~~  198 (388)
                      .+....-+..|.+.+.....+.-|.+++.+|.+.-+.. ++.+-+.+++.+.++|=.+..+    ..++++++.|+.+-+
T Consensus        56 ~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs  135 (288)
T COG4975          56 LTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS  135 (288)
T ss_pred             hhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence            33333355667777888888888999988887765543 3444566889999998666665    467889999999998


Q ss_pred             ecccc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccc
Q 016521          199 VTDLQ--------FSLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWN  270 (388)
Q Consensus       199 ~~~~~--------~~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  270 (388)
                      .+|.+        +.-.|+...+.+.+.|..|.+..+..    +.+-++...-|+.-.++..+.+....++..     .+
T Consensus       136 ~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~~-----~~  206 (288)
T COG4975         136 KQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEKR-----FN  206 (288)
T ss_pred             eeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccccc-----hH
Confidence            87631        22468888888999999998875543    355666655555444433333332222111     12


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccc----hhhhHHHHHHHHHHH
Q 016521          271 FSNTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTS----ICGAFVAIVGMSFYT  345 (388)
Q Consensus       271 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~----i~G~~li~~Gv~ly~  345 (388)
                       ...+.-...|+.....|...+..-++.+..+.=.+..+--+++.+-|.++++|+=|..+    ++|+++++.|..+..
T Consensus       207 -K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         207 -KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             -HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence             22333345556666667666666556555554445556668888999999999988765    467777777765543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.04  E-value=0.0023  Score=50.30  Aligned_cols=65  Identities=11%  Similarity=-0.024  Sum_probs=52.6

Q ss_pred             HHHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521          133 LGFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA  197 (388)
Q Consensus       133 ~~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~  197 (388)
                      ..+.++.+..+...+++++|++.+-.+-. .....+++.+++++||++++.+++++.+++.|+...
T Consensus        41 ~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         41 SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            34455666677778999999998766643 455678889999999999999999999999998764

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.03  E-value=0.0022  Score=49.77  Aligned_cols=66  Identities=17%  Similarity=0.107  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          133 LGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       133 ~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      .-+++..+..+...|+|++|++.+-.+- ..-...+++.+++++||+.+..+++++.++++|+....
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            3445566667778899999998876554 34455678899999999999999999999999987654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.02  E-value=0.0028  Score=49.54  Aligned_cols=65  Identities=14%  Similarity=0.094  Sum_probs=53.2

Q ss_pred             HHHHHHHHhhhhhhhhcchhhHHHHHHH-hHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          134 GFVMSFSTGLANVSLKYNSVGFYQMAKI-AVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       134 ~~~~~~~~~~~~~al~~~s~s~~~il~~-~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      .++++.+..+...+++.+|++.+-.+-. .....+++.+++++||++++.+++++.++++|+....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            4455666677778999999988766554 5566788999999999999999999999999997764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.92  E-value=0.0034  Score=57.20  Aligned_cols=76  Identities=17%  Similarity=0.145  Sum_probs=65.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhhh
Q 016521          273 NTLAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       273 ~~~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      ......+-+++-...+...|..+++.+|.+.+++...|.+.+.++++++++.+++..||++..+.++|+.+.....
T Consensus        16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            3455556666666677788889999999999999999999999999999999999999999999999998865433

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.70  E-value=0.014  Score=46.79  Aligned_cols=54  Identities=13%  Similarity=0.135  Sum_probs=42.5

Q ss_pred             HHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          293 LALGATSAISH-VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       293 ~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      ..+++.+...+ ++..-+..+.+++.|+++|||++++.+++|+.+++.|+..-+.
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            34566554443 4445577888899999999999999999999999999987643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.62  E-value=0.029  Score=50.24  Aligned_cols=121  Identities=12%  Similarity=0.052  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHHHHh-hccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHH-HHHHHhhhhhh
Q 016521           70 NFVVAVSIIFMNKWVL-KNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFV-MSFSTGLANVS  147 (388)
Q Consensus        70 ~~~~s~~~~~~nK~~~-~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a  147 (388)
                      .-.++...++..|.+- ..+|   + .=+..-++++.++..++-....-+.. ..+......+..+++ -++...+...+
T Consensus       156 AG~~Wa~YIv~G~r~g~~~~g---~-~g~a~gm~vAaviv~Pig~~~ag~~l-~~p~ll~laLgvavlSSalPYsLEmiA  230 (292)
T COG5006         156 AGACWALYIVLGQRAGRAEHG---T-AGVAVGMLVAALIVLPIGAAQAGPAL-FSPSLLPLALGVAVLSSALPYSLEMIA  230 (292)
T ss_pred             HhHHHHHHHHHcchhcccCCC---c-hHHHHHHHHHHHHHhhhhhhhcchhh-cChHHHHHHHHHHHHhcccchHHHHHH
Confidence            3455555555555544 2222   2 23355677777777666433221110 011111112222322 23456788889


Q ss_pred             hhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhhee
Q 016521          148 LKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVA  195 (388)
Q Consensus       148 l~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~  195 (388)
                      +...|...+.++.+..|.+.++.++++++|+++..||+++..++.+.+
T Consensus       231 L~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         231 LRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999998877654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.60  E-value=0.015  Score=45.86  Aligned_cols=54  Identities=15%  Similarity=0.181  Sum_probs=42.6

Q ss_pred             HHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          293 LALGATSAISH-VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       293 ~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      ..+++.+...+ ++..-+..+.+++.|+++|||++++.+++|+.+++.|+..-+.
T Consensus        49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34555554433 4445577788899999999999999999999999999988653

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.59  E-value=0.053  Score=49.71  Aligned_cols=68  Identities=13%  Similarity=0.092  Sum_probs=55.4

Q ss_pred             hHHHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHH----HHHhhhhhee
Q 016521          128 LSLFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVI----TLTAVSIGVA  195 (388)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~----~l~l~~~Gv~  195 (388)
                      +.-+..|+.++..+.++..|-+.+.++.+-.+..+.+++..+.+.+++||+=+++++.    +++++++|..
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            4445678999999999999999999999999999999999999999999988888754    4455555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.56  E-value=0.046  Score=43.04  Aligned_cols=52  Identities=17%  Similarity=0.309  Sum_probs=42.5

Q ss_pred             HHhccCchh-hHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHH
Q 016521          293 LALGATSAI-SHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       293 ~~i~~~~a~-~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly  344 (388)
                      ..+++.+.. .+++..-+..+.+.+.|+++|||++++.+++|+.+++.|+...
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            345655543 3466667778889999999999999999999999999999774

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.50  E-value=0.027  Score=53.66  Aligned_cols=137  Identities=15%  Similarity=0.089  Sum_probs=88.6

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHh----cCCCcccc-c-ccchhhHHHHH
Q 016521          205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPC----LDPPGVLS-F-NWNFSNTLAIL  278 (388)
Q Consensus       205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~----~~~~~~~~-~-~~~~~~~~~l~  278 (388)
                      ...|+++++++++|++.+.+-+|+ .   +-.+++..+.  ..+. +..++.++    +..+...+ . +.+...+..-.
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~---k~w~wE~~W~--v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-V---KKWSWETMWS--VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-c---CCCchhHHHH--HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence            357999999999999998887665 2   2345555432  2222 11111121    11122111 1 24555666777


Q ss_pred             HHHHHHHHHHHHHHHHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCc---c----ccchhhhHHHHHHHHHHHhhh
Q 016521          279 MSAFLGFLLQWSGALALGATSAISH-VVLGQFKTCIILLGNYYIFGANP---G----TTSICGAFVAIVGMSFYTYLN  348 (388)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~---t----~~~i~G~~li~~Gv~ly~~~~  348 (388)
                      ++|++....+..++..+++.+.... .+..-+..+.+.+++.+++||-.   +    ...++|.+++++|+.+-.+.-
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            7888888888888888887776544 34455677888999999999643   2    357889999999998877643

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.44  E-value=0.011  Score=45.32  Aligned_cols=56  Identities=11%  Similarity=0.064  Sum_probs=32.4

Q ss_pred             HHHHHHHhhhhhhhhcchhhHHHHH-HHhHHHHHHHHHHHHhccccchhhHHHHHhh
Q 016521          135 FVMSFSTGLANVSLKYNSVGFYQMA-KIAVTPSIVLAEFICYRKRVSVLKVITLTAV  190 (388)
Q Consensus       135 ~~~~~~~~~~~~al~~~s~s~~~il-~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~  190 (388)
                      ..++.+..+...+++++|++.+-.+ .....+.+++.+.+++||++++.++.++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3566677788899999999988554 4577888999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.37  E-value=0.13  Score=42.46  Aligned_cols=117  Identities=16%  Similarity=0.205  Sum_probs=80.3

Q ss_pred             HHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHH
Q 016521           78 IFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQ  157 (388)
Q Consensus        78 ~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~  157 (388)
                      ..+|-.+-+..| + |+.-++..+.++++.+.++....+.+..+..++.|++....|++.+....+.+++...+.++...
T Consensus        17 ~~~N~~L~~~~g-s-~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~   94 (138)
T PF04657_consen   17 AAFNGQLGKALG-S-PLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALTT   94 (138)
T ss_pred             HHHHHHHHHHhC-c-cHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence            344444444434 3 78889999999988887665554443333344566666667888888888888898888877776


Q ss_pred             HHHHhH-HHHHHHHHHH----HhccccchhhHHHHHhhhhheee
Q 016521          158 MAKIAV-TPSIVLAEFI----CYRKRVSVLKVITLTAVSIGVAV  196 (388)
Q Consensus       158 il~~~~-p~~~~l~~~~----~l~e~~~~~~~~~l~l~~~Gv~l  196 (388)
                      .+.-+. ....+++..+    .-|+++++.+.+++++.++|+.+
T Consensus        95 ~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   95 ILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            655443 3344556654    34589999999999999999753

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.37  E-value=0.13  Score=42.80  Aligned_cols=136  Identities=13%  Similarity=0.022  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH
Q 016521          206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGF  285 (388)
Q Consensus       206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  285 (388)
                      +...+.++.+.++..++.-+..++.+..+ +|..........+.+.+..+..+.+....+.. .....|+.+ ..|+++.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~-~~~~pwW~~-~GG~lGa   80 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAA-VASAPWWAW-IGGLLGA   80 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh-ccCCchHHH-Hccchhh
Confidence            45677888888888888888877776544 57776666666666666555544443322221 112234444 3446665


Q ss_pred             HHHHHHHHHhccCchhhHHHhhhhhH-HHHHHHHHhhcC----CCccccchhhhHHHHHHHHHH
Q 016521          286 LLQWSGALALGATSAISHVVLGQFKT-CIILLGNYYIFG----ANPGTTSICGAFVAIVGMSFY  344 (388)
Q Consensus       286 ~~~~~~~~~i~~~~a~~~sv~~~l~~-v~~~~~~~l~~g----e~~t~~~i~G~~li~~Gv~ly  344 (388)
                      ..-........+.++++...+...-. +.+.+++.+=+.    .+++...++|++++++|+++.
T Consensus        81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            55555566778888877766554444 344555544333    468999999999999996554

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.27  E-value=0.015  Score=52.99  Aligned_cols=132  Identities=10%  Similarity=0.084  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521          208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL  287 (388)
Q Consensus       208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  287 (388)
                      |.+.++.|+++++.+.+=.|+..   .-|++-..+++.....+.-++...+.+.+..         +..-.++|.+....
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f---------~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFLVGLVVNLILGFPPF---------YPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc---------eeHHHhhhhhhhcC
Confidence            56677888888877666545433   3456555555544333322333333333221         11122344444444


Q ss_pred             HHHHHHHhccCch-hhHHHhhhhhHHHHHHHHHh-hcCCCc-----cccchhhhHHHHHHHHHHHhhhccc
Q 016521          288 QWSGALALGATSA-ISHVVLGQFKTCIILLGNYY-IFGANP-----GTTSICGAFVAIVGMSFYTYLNLCN  351 (388)
Q Consensus       288 ~~~~~~~i~~~~a-~~~sv~~~l~~v~~~~~~~l-~~ge~~-----t~~~i~G~~li~~Gv~ly~~~~~~~  351 (388)
                      |....-+++..+- +-..+.+..+-+.....|-+ +||++.     .+.+++|++++++|..+|...|..+
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            4444444555443 22333444444555554433 666543     5789999999999999998766544

The region concerned is approximately 280 residues long.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.19  E-value=0.025  Score=53.19  Aligned_cols=118  Identities=19%  Similarity=0.115  Sum_probs=80.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHH
Q 016521          205 SLFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLG  284 (388)
Q Consensus       205 ~~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  284 (388)
                      ...|+.+++.++++.+....++|+-..+.+.....                    +...... .+..+.|+.-......+
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~--------------------~~~~~~~-~l~~~~W~~G~~~~~~g   63 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR--------------------AGSGGRS-YLRRPLWWIGLLLMVLG   63 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------------------ccchhhH-HHhhHHHHHHHHHHhcc
Confidence            46799999999999999999988765443210000                    0000000 01112232222222222


Q ss_pred             HHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          285 FLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       285 ~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      .   ...+..+...+++..+.++.+.-+++.+++..+++|+++...++|+++++.|..+-..
T Consensus        64 ~---~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   64 E---ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             h---HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            2   3445567888999999999999999999999999999999999999999999976543

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.15  E-value=0.041  Score=43.03  Aligned_cols=52  Identities=8%  Similarity=0.103  Sum_probs=42.8

Q ss_pred             HhccCch-hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          294 ALGATSA-ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       294 ~i~~~~a-~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      .+++.+. +.+++..-+..+.+.+.|+++|||++++.+++|+.+++.|+..-+
T Consensus        49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            4555443 345667778888999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.10  E-value=0.039  Score=42.85  Aligned_cols=53  Identities=13%  Similarity=0.147  Sum_probs=42.5

Q ss_pred             HhccCch-hhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          294 ALGATSA-ISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       294 ~i~~~~a-~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      .+++.+- +.+++..-+-.+.+.+.|+++|||++++.+++|+.++++|+...+.
T Consensus        50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            4455443 2346666677788889999999999999999999999999987654

>TIGR00803 nst UDP-galactose transporter

Probab=95.95  E-value=0.23  Score=44.48  Aligned_cols=67  Identities=9%  Similarity=0.026  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheee
Q 016521          130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAV  196 (388)
Q Consensus       130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l  196 (388)
                      .....+..+....+.++.++|.+.....++..+.++++.+++.++++++++..++.|+.+++.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3334445555666788999999999999999999999999999999999999999999999999765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.99  E-value=0.077  Score=41.91  Aligned_cols=67  Identities=12%  Similarity=0.047  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHhhhhhhhhcchhhHHHHHH-HhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521          130 LFTLGFVMSFSTGLANVSLKYNSVGFYQMAK-IAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA  197 (388)
Q Consensus       130 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~  197 (388)
                      ..+..+-.. +...+++.+...+.|.+.-+. +++-++|++.++++.+|..+++.++|+.++++|+.+.
T Consensus        45 ~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   45 IIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            444444333 344567888888888888775 6677788899988777888999999999999999875

Many members are annotated as potential transmembrane proteins.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.83  E-value=0.19  Score=44.28  Aligned_cols=127  Identities=13%  Similarity=0.135  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC-----CcccchhHHHHHHHHHHH
Q 016521           65 ASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP-----PAKSGLLSLFTLGFVMSF  139 (388)
Q Consensus        65 ~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  139 (388)
                      .|+..++..+....+..|...+-.++. -..-.++..+++.+++..+......+...     .+......++..|++-..
T Consensus       158 ~Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svg  236 (309)
T COG5070         158 LWMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVG  236 (309)
T ss_pred             EEEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhh
Confidence            467778888888888888877754566 56677899999999888776544322111     011111225556666555


Q ss_pred             HHhhhhhhhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhh
Q 016521          140 STGLANVSLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSI  192 (388)
Q Consensus       140 ~~~~~~~al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~  192 (388)
                      -..+.-|++.-++...+.++.++.-...++.+.++++++.+..++.++++++.
T Consensus       237 iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl  289 (309)
T COG5070         237 ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL  289 (309)
T ss_pred             hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence            56678899999999999999998888888888899999999888887766553

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=94.64  E-value=1.1  Score=42.26  Aligned_cols=71  Identities=15%  Similarity=0.087  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          275 LAILMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       275 ~~l~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      .-+.+-+++-..-|...|....+.+|.+.++...+|...+.+++.++++++++..||...++.+.|+.+-.
T Consensus        93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            34444444444555667888999999999999999999999999999999999999999999999997755

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.06  E-value=0.17  Score=38.63  Aligned_cols=46  Identities=17%  Similarity=0.146  Sum_probs=24.7

Q ss_pred             HHHhccCchhhH-HHhhhhhHHHHHHHHHhhcCCCccccchhhhHHH
Q 016521          292 ALALGATSAISH-VVLGQFKTCIILLGNYYIFGANPGTTSICGAFVA  337 (388)
Q Consensus       292 ~~~i~~~~a~~~-sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li  337 (388)
                      ...+++.+...+ .+..-+..+.+.+.|+++|||++|+.+++|+.++
T Consensus        47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            346777666555 5556678899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=93.89  E-value=0.033  Score=50.27  Aligned_cols=68  Identities=15%  Similarity=0.185  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHH
Q 016521          278 LMSAFLGFLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYT  345 (388)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~  345 (388)
                      ++=|+.++......|+..++.+-.-++++....|+++++++|++++|+.|....+|..+.+.|+.+-.
T Consensus       101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv  168 (346)
T KOG4510|consen  101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV  168 (346)
T ss_pred             EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence            34455555555566777888888888999999999999999999999999999999999999997744

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.29  E-value=0.052  Score=48.45  Aligned_cols=129  Identities=12%  Similarity=0.043  Sum_probs=83.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 016521          208 GACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNFSNTLAILMSAFLGFLL  287 (388)
Q Consensus       208 G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  287 (388)
                      +++++++=++.|+.......+..    -+|.+...-++.-+.++.+.+. ++..|.     .+...+..-.++|++..+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~-~~~~p~-----~T~~~~iv~~isG~~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVF-LFVSPE-----LTLTIFIVGFISGAFWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHh-eeecCc-----cchhhHHHHHHhhhHhhhh
Confidence            46778888888887766644433    3466555555544444433333 222221     2344556667888888888


Q ss_pred             HHHHHHHhccCchhhHHHhhh-hhHHHHHHHHHhhcCCCccccch----hhhHHHHHHHHHHHh
Q 016521          288 QWSGALALGATSAISHVVLGQ-FKTCIILLGNYYIFGANPGTTSI----CGAFVAIVGMSFYTY  346 (388)
Q Consensus       288 ~~~~~~~i~~~~a~~~sv~~~-l~~v~~~~~~~l~~ge~~t~~~i----~G~~li~~Gv~ly~~  346 (388)
                      +..+|..++..+...+..+.+ .+.+-+.++|++.|||-.+..++    +.+++++.|+++-.+
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~  136 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSK  136 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeee
Confidence            888898888777776665443 56677889999999999887664    456677778766544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=93.25  E-value=0.13  Score=48.52  Aligned_cols=123  Identities=11%  Similarity=0.092  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHhh--ccCCChHHHHHHHHHHHHHHHHH-HHHHccCCCCC----CCcccc-hhHHHHHHHHHHHHHhhhhh
Q 016521           75 VSIIFMNKWVLK--NIGFQFPIFLSFIHYAVSWALMA-VLNAFALLPAS----PPAKSG-LLSLFTLGFVMSFSTGLANV  146 (388)
Q Consensus        75 ~~~~~~nK~~~~--~~g~~~p~~l~~~r~~~a~~~l~-~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~  146 (388)
                      ..-.++.|.++.  +..++ ++.+..+.--++...+. ++......+..    ...++. .......+++..+.+...++
T Consensus       176 al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~  254 (316)
T KOG1441|consen  176 ALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSAFL  254 (316)
T ss_pred             HHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            333455566663  44566 77777777666666666 54333211111    001111 12233334555556677788


Q ss_pred             hhhcchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeee
Q 016521          147 SLKYNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVAT  198 (388)
Q Consensus       147 al~~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~  198 (388)
                      .+..+|+=+++++...--.++...+++++++++++.+.+|..++++|+.+-+
T Consensus       255 ~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  255 VIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            8999999999998877777888889999999999999999999999987643

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=92.89  E-value=0.97  Score=43.03  Aligned_cols=123  Identities=15%  Similarity=0.173  Sum_probs=82.9

Q ss_pred             HHHHHhhcc--CCChHHHHHH---HHHHHHHHHHHHHHHccCCCCCCCcccchhH-HHHHH-HHHHHHHhhhhhhhhcch
Q 016521           80 MNKWVLKNI--GFQFPIFLSF---IHYAVSWALMAVLNAFALLPASPPAKSGLLS-LFTLG-FVMSFSTGLANVSLKYNS  152 (388)
Q Consensus        80 ~nK~~~~~~--g~~~p~~l~~---~r~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~al~~~s  152 (388)
                      +-|.-..+.  +.+.|+++-+   +.+++-+..+.++... ..++++.+...... ++..+ +...++=.++.+|.-.++
T Consensus       265 llk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs  343 (416)
T KOG2765|consen  265 LLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTS  343 (416)
T ss_pred             HHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhcc
Confidence            334444433  4665666554   4455555555566666 44444433333333 33333 334455667778888888


Q ss_pred             hhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecccc
Q 016521          153 VGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTDLQ  203 (388)
Q Consensus       153 ~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~~~  203 (388)
                      .-..++..+.+.|..++.-.++.++++++..++|.+.+++|.+++...+..
T Consensus       344 ~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  344 PLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             chhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            888888888889999999998889999999999999999999888775543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=91.03  E-value=8.3  Score=36.08  Aligned_cols=134  Identities=14%  Similarity=0.180  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCH-HHHHHHHhHHHHHHHHHHHHhcCCCcccccccch-hhHHHHHHHHHHHHH
Q 016521          209 ACVALAWIVPSAVNKILWSNLQQRESWTA-LALMWKTTPITLLFLGSLIPCLDPPGVLSFNWNF-SNTLAILMSAFLGFL  286 (388)
Q Consensus       209 ~~~~l~a~~~~a~~~i~~~~~~~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~  286 (388)
                      ...++.-+++..+-.+..|.....++.+. +.++.+|+..+++.+...-.. ..-....++|+. ..|.   -..++-++
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~---P~~~lf~~   89 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWF---PVSLLFVG   89 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHc---cHHHHHHH
Confidence            44555556666666777777776666654 455568888877665444321 111111122321 1221   11122223


Q ss_pred             HHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          287 LQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       287 ~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      +.+.....+++.+....+++..+.++++.+...+++|..++...+.......+|...+..
T Consensus        90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence            333445668999999999999999999999999999999999999999999988876543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=90.78  E-value=0.32  Score=38.43  Aligned_cols=54  Identities=13%  Similarity=0.126  Sum_probs=41.8

Q ss_pred             HHHHHhccCchhhHHHh-hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHH
Q 016521          290 SGALALGATSAISHVVL-GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSF  343 (388)
Q Consensus       290 ~~~~~i~~~~a~~~sv~-~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~l  343 (388)
                      .+++.+++.+-+.+..+ +.+.-+++++.++++.+|..+...++|++++++|+.+
T Consensus        57 ~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   57 LFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            34455666665555444 5777899999998888888899999999999999854

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.68  E-value=4.4  Score=38.41  Aligned_cols=140  Identities=11%  Similarity=0.057  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHhHHHHHHHHHHH-HhcCCCccccc--ccchhhHHHHHHHHH
Q 016521          206 LFGACVALAWIVPSAVNKILWSNLQQRESWTALALMWKTTPITLLFLGSLI-PCLDPPGVLSF--NWNFSNTLAILMSAF  282 (388)
Q Consensus       206 ~~G~~~~l~a~~~~a~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~~~  282 (388)
                      ..|+++-.++.++.+.+.+=.||.+    --+|+..+....+-....+|.. ....-|+..+.  +.+...+....+.++
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            5799999999999888776555443    3456655444333222222322 22233333221  122233333333333


Q ss_pred             HHHHHHHHHHHHhccCch-hhHHHhhhhhHHHHHHHHHhhc-------CCCccccchhhhHHHHHHHHHHHhhhc
Q 016521          283 LGFLLQWSGALALGATSA-ISHVVLGQFKTCIILLGNYYIF-------GANPGTTSICGAFVAIVGMSFYTYLNL  349 (388)
Q Consensus       283 ~~~~~~~~~~~~i~~~~a-~~~sv~~~l~~v~~~~~~~l~~-------ge~~t~~~i~G~~li~~Gv~ly~~~~~  349 (388)
                      +.-......=..+++++- ...++..-+-.++..++--++.       +++-....++|.++++.|+.+..+.-.
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            333222222233444442 2223322233333333333332       233345789999999999998877544

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=90.33  E-value=4.2  Score=37.77  Aligned_cols=131  Identities=9%  Similarity=0.004  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHHccCCCCCC-----CcccchhHHHHHHHHH
Q 016521           63 PIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNAFALLPASP-----PAKSGLLSLFTLGFVM  137 (388)
Q Consensus        63 ~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  137 (388)
                      ....+..+.++=.-+.-..+.++.+++.. ++.+.+.-.+...++-.............     ..++..+.++..+++.
T Consensus       173 G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~g  251 (327)
T KOG1581|consen  173 GILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCG  251 (327)
T ss_pred             hHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhh
Confidence            34455666666656666777888888877 66555544444444333322222111110     1122233377788888


Q ss_pred             HHHHhhhhhhhh-cchhhHHHHHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhhee
Q 016521          138 SFSTGLANVSLK-YNSVGFYQMAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVA  195 (388)
Q Consensus       138 ~~~~~~~~~al~-~~s~s~~~il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~  195 (388)
                      +.+..+.+.-++ +-|..+.++.. +-=++..+++.++++.++++.+|.++..++.|+.
T Consensus       252 avGQ~FI~~TI~~FGslt~t~I~t-tRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~  309 (327)
T KOG1581|consen  252 AVGQLFIFYTIERFGSLTFTTIMT-TRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIF  309 (327)
T ss_pred             hhhhheehhhHhhcccHHHHHHHH-HHHHHHHHHHHHHhCCccchhhccCeeeehHHHH
Confidence            888777777765 46777766655 5668889999999999999999999888877753

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.81  E-value=11  Score=31.34  Aligned_cols=105  Identities=12%  Similarity=0.146  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcc-CCCCCCCcccchhHHHHHHHHHHHHHhhhhhhhhcchhhHHH-HHHHhHHHHHHHH
Q 016521           93 PIFLSFIHYAVSWALMAVLNAFA-LLPASPPAKSGLLSLFTLGFVMSFSTGLANVSLKYNSVGFYQ-MAKIAVTPSIVLA  170 (388)
Q Consensus        93 p~~l~~~r~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~-il~~~~p~~~~l~  170 (388)
                      |+.-++.-+.++..++..+...+ +.+.....++.|++....|++.+.....+......+.++..+ ++.+.+.+.-+++
T Consensus        34 pl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glli  113 (150)
T COG3238          34 PLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLI  113 (150)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence            78888888888887776655443 222222235556665555655444333333344444333333 3333344444444


Q ss_pred             HHH-Hh---ccccchhhHHHHHhhhhheeee
Q 016521          171 EFI-CY---RKRVSVLKVITLTAVSIGVAVA  197 (388)
Q Consensus       171 ~~~-~l---~e~~~~~~~~~l~l~~~Gv~l~  197 (388)
                      -.+ ++   +++++..+++++++.++|+.+.
T Consensus       114 D~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238         114 DHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             HhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            322 23   3788999999999999995544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.56  E-value=2.7  Score=37.54  Aligned_cols=58  Identities=16%  Similarity=0.197  Sum_probs=49.5

Q ss_pred             HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521          290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~  347 (388)
                      +...+++..+=-+.-+--..||+-..++|+++.+..-.|....-..+|+.|++++-|.
T Consensus       101 ssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK  158 (337)
T KOG1580|consen  101 SSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYK  158 (337)
T ss_pred             hccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcc
Confidence            4455677777667777778999999999999999999999999999999999998764

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=84.28  E-value=2.3  Score=38.90  Aligned_cols=138  Identities=12%  Similarity=0.008  Sum_probs=73.0

Q ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHHHHHHH-----ccCCCCCCCcccchhH--H
Q 016521           58 QRLCGPIASLTFNFVVAVSIIFMNKWVLKNIGFQFPIFLSFIHYAVSWALMAVLNA-----FALLPASPPAKSGLLS--L  130 (388)
Q Consensus        58 ~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~g~~~p~~l~~~r~~~a~~~l~~~~~-----~~~~~~~~~~~~~~~~--~  130 (388)
                      .++...+..+.+..+.|.-+.+++.-.+++||-+ |-...++--++..+..+....     ++.... .++-..+..  .
T Consensus       160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~-se~~~~p~~g~~  237 (330)
T KOG1583|consen  160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFK-SESYLIPLLGFK  237 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhc-CcceeccccCcc
Confidence            4455566677778888888999999999999887 777777776666655444310     000000 000001111  2


Q ss_pred             HHHHHHHH-HHHhhhhhhhhcchhhHHH-------HHHHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeee
Q 016521          131 FTLGFVMS-FSTGLANVSLKYNSVGFYQ-------MAKIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVA  197 (388)
Q Consensus       131 ~~~~~~~~-~~~~~~~~al~~~s~s~~~-------il~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~  197 (388)
                      +|....+. .+...++.+.+.+..=..-       +....-=.+..+++.+.++..+++..|+|.+++++|..+.
T Consensus       238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~f  312 (330)
T KOG1583|consen  238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLF  312 (330)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHH
Confidence            34443332 2334555555543211110       0000111234556666667777777777777777665443

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=82.63  E-value=0.53  Score=40.68  Aligned_cols=63  Identities=19%  Similarity=0.159  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHhh
Q 016521          285 FLLQWSGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTYL  347 (388)
Q Consensus       285 ~~~~~~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~~  347 (388)
                      .+.++.+...+++.+|+.++.+...+..+..+++++++||++....++..++.+.|+....|.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            345666667889999999999999999999999999999999999999999999999776553

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=80.85  E-value=16  Score=33.80  Aligned_cols=57  Identities=16%  Similarity=0.045  Sum_probs=48.1

Q ss_pred             HHHHHhccCchhhHHHhhhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          290 SGALALGATSAISHVVLGQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       290 ~~~~~i~~~~a~~~sv~~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      ..|..+..++|+..++.--...+++-+++..+++.+++..||+|+..+.+|+..-.+
T Consensus       102 lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen  102 LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            344456778888888888788899999999999999999999999999999976443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 39.2 bits (90), Expect = 6e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 14/40 (35%)

Query: 31 ERGKALEELQASLFNRFRSPDGAKRQEQRLCGPIASLTFN 70
          E+ +AL++LQASL  +  + D A         P  +L   
Sbjct: 18 EK-QALKKLQASL--KLYADDSA---------P--ALAIK 43

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 8e-04
 Identities = 48/376 (12%), Positives = 94/376 (25%), Gaps = 126/376 (33%)

Query: 1   MKMVYSREILNFLVKKDVRK--------ILKRKDSDAGER--GKALEE----LQASLFNR 46
            K + S+E ++ ++               L  K  +  ++   + L      L + +   
Sbjct: 42  PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE 101

Query: 47  FRSPDGAKR----QEQRLCGPIASLTFNFVV-------------------AVSIIFMN-- 81
            R P    R    Q  RL           V                     V I  +   
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161

Query: 82  -KWVL-----KNIGFQ----FPIF-LSFIHYAVSWALMAVLNAFALL-----------PA 119
            K  +      +   Q    F IF L+  +      ++ +L                  +
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 120 SPP-----AKSGLLSLFTLGFVMSFSTGL---ANVS----LKYNSVGFYQMAKIAVT--- 164
           +        ++ L  L        +   L    NV         ++      KI +T   
Sbjct: 222 NIKLRIHSIQAELRRLLKS---KPYENCLLVLLNVQNAKAWNAFNLS----CKILLTTRF 274

Query: 165 PSIVLAEFICYRKRVSV----------------LKVITLTAVSIGVAVATVTDLQFSLFG 208
             +           +S+                LK +      +   V T    + S+  
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 209 ACV---ALAW-----IVPSAVNKILWSNLQQ------RESWTALALMWKTTPITLLFLGS 254
             +      W     +    +  I+ S+L        R+ +  L++   +  I       
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI------- 387

Query: 255 LIPCLDPPGVLSFNWN 270
                 P  +LS  W 
Sbjct: 388 ------PTILLSLIWF 397

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.39
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.15
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.08
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.04

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.39  E-value=5e-07  Score=73.24  Aligned_cols=59  Identities=17%  Similarity=0.209  Sum_probs=42.5

Q ss_pred             HHHHHHHhccCchhhHHHh-hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          288 QWSGALALGATSAISHVVL-GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       288 ~~~~~~~i~~~~a~~~sv~-~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      .++....+++.++..+..+ ..+.|++++++|+++|||++|+.+++|++++++|+++.+.
T Consensus        44 ~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           44 FWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3455678999999988887 8999999999999999999999999999999999988764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.15  E-value=3.8e-06  Score=65.54  Aligned_cols=70  Identities=16%  Similarity=0.132  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHhhhhhhhhcchhhHHHHH-HHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeecc
Q 016521          132 TLGFVMSFSTGLANVSLKYNSVGFYQMA-KIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVTD  201 (388)
Q Consensus       132 ~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~~  201 (388)
                      ...+.++.+..+...++++.|++.+..+ ....|+++++++++++||++++.++++++++++|+.+....+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344567777888899999999999888 789999999999999999999999999999999998876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.08  E-value=4.6e-06  Score=67.51  Aligned_cols=69  Identities=16%  Similarity=0.131  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhhhhhhhhcchhhHHHHH-HHhHHHHHHHHHHHHhccccchhhHHHHHhhhhheeeeeec
Q 016521          132 TLGFVMSFSTGLANVSLKYNSVGFYQMA-KIAVTPSIVLAEFICYRKRVSVLKVITLTAVSIGVAVATVT  200 (388)
Q Consensus       132 ~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~p~~~~l~~~~~l~e~~~~~~~~~l~l~~~Gv~l~~~~  200 (388)
                      ...+.++++..+.+.++++++++.+..+ .+..|+++++++++++||++++.+++|++++++|+.++...
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344566777899999999999988777 88999999999999999999999999999999999887543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.04  E-value=7.9e-05  Score=58.01  Aligned_cols=57  Identities=16%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             HHHHHhccCchhhHHHh-hhhhHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHh
Q 016521          290 SGALALGATSAISHVVL-GQFKTCIILLGNYYIFGANPGTTSICGAFVAIVGMSFYTY  346 (388)
Q Consensus       290 ~~~~~i~~~~a~~~sv~-~~l~~v~~~~~~~l~~ge~~t~~~i~G~~li~~Gv~ly~~  346 (388)
                      .....+++.+...+..+ ..+.|+.++++|+++|||++|+.+++|+.+++.|+...+.
T Consensus        46 ~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           46 LLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44557899999888777 7999999999999999999999999999999999988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00