Citrus Sinensis ID: 016527

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEEcccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHcccccccccccccEEEccccccccHHHHHHHccccccccccccccccccccccccccccccccHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccEcHHHHHHccc
Coil and Loop (DISEMBL)
meqepflgsqtrpqHQLEAILEeehdhdtlhtvpqslssphifneienldqpqsqappessttwkpgslhrsktapaLVVLRDVqqqtsqvpkpksessFIIRQAFVLLSIYLFVGVVIYsfntdhfsgvethpvVDALYFCIVTMCtigygdiapltpaTKVFACLFVLVGFGFIDILLSGVVNYVLDLQEnmiltgiqmgkvkegfsaRDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTtvgygdrafktlpGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAAdmnhngfisksEYVIFKLKEMGKIGEKDISQICNQfnrldpnncgkitlpdllenhl
Flexible Loop (DISEMBL)
meqepflgsqtrpQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAppessttwkpgslHRSKTAPALVVLRDVQQqtsqvpkpksessfIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTgiqmgkvkegfSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQfnrldpnncgkitlpdllenhl
Low Complexity Region (SEG)
MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRlkvglalgvvvlCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL
Disordered region (IsUnstruct)
***************************************************************************************************FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP*******
Disordered Region (DISOPRED)
***************************************************************************************************FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEG*******VDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIA********************NGFISKSEYVIFKLKE******KD**QICNQFNRLDPNNCGKITLPDLLEN**
Disordered Region (DISEMBL)
**************HQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENL*********************RSKTAPALVVLRDV*************SSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL
Disordered Region (DISPRO)
*************QHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLD**********************************************ESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL*N*L
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRoooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooRRRRRRRRRRRRRRRRRRRRRRooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q9S6Z8	408	Two-pore potassium channe	yes	no	0.987	0.938	0.594	1e-130
Q9SVV6	436	Two-pore potassium channe	no	no	0.835	0.743	0.623	1e-111
Q69TN4	456	Two pore potassium channe	yes	no	0.822	0.699	0.570	1e-104
Q9FL25	443	Two-pore potassium channe	no	no	0.822	0.720	0.588	1e-103
Q9FWX6	284	Two-pore potassium channe	no	no	0.662	0.904	0.456	2e-57
Q8LBL1	363	Two-pore potassium channe	no	no	0.716	0.765	0.381	7e-56
Q8LIN5	349	Two pore potassium channe	no	no	0.659	0.733	0.363	4e-50
Q850M0	347	Two pore potassium channe	no	no	0.798	0.893	0.353	1e-47
Q9XFR0	260	Potassium inward rectifie	no	no	0.399	0.596	0.544	2e-40
P40310	691	Outward-rectifier potassi	yes	no	0.453	0.254	0.247	3e-10

>sp|Q9S6Z8|TPK5_ARATH Two-pore potassium channel 5 OS=Arabidopsis thaliana GN=TPK5 PE=1 SV=1

 Score =  464 bits (1194), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/409 (59%), Positives = 296/409 (72%), Gaps = 26/409 (6%)

Query: 4   EPFLGSQTRPQHQLEAILEEEHDHDTLH--TVPQSLSSPHIFNEI---------ENLDQP 52
           EP +  Q  P+ +L+ I E      +    T+P+S+S+   F+EI         ++L+Q 
Sbjct: 2   EPLISPQ--PRFRLQPIPENPSSSSSSASITIPRSISNTSFFHEISQERLLLHHQDLEQS 59

Query: 53  --------QSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQ 104
                    S +   +    +   LHRS+TAPA+V+++D++ +  +  KP   S  IIRQ
Sbjct: 60  VQDDKEDQDSDSDETNRFLSQTRPLHRSRTAPAMVIIKDLRTKPPETKKPSPVSKSIIRQ 119

Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
           A  LL +YL +GV IYSFN DH+SG+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK+F
Sbjct: 120 AIFLLIVYLTLGVSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIF 179

Query: 165 ACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQ-----MGKVKEGFSARDYIVDVAK 219
           A +FVL GFGF+DILLSGVVNYVLDLQE+MILTGIQ            FSA+DYI+D  K
Sbjct: 180 AVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEK 239

Query: 220 GRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLP 279
           GRMRIR+KV LAL VVVLCI +GAL+L F+E+L ++DS YLSVMSVTTVGYGDRAFKTL 
Sbjct: 240 GRMRIRMKVCLALCVVVLCIGVGALVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQ 299

Query: 280 GRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFI 339
           GR FAA+WLL STL VARAFLYLAEARID+RHR+  K  L REIT+DDLL AD   +GFI
Sbjct: 300 GRLFAAVWLLVSTLAVARAFLYLAEARIDRRHRKAVKLALNREITVDDLLKADTYQHGFI 359

Query: 340 SKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL 388
           SKSEY++ KLKEMGKI +KDI Q+  QF +LDPN  GKITLPDLL + L
Sbjct: 360 SKSEYIVLKLKEMGKITQKDIDQVVIQFEKLDPNQIGKITLPDLLGDPL 408

Probable voltage-independent potassium-selective tonoplast ion channel.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SVV6|TPK3_ARATH Two-pore potassium channel 3 OS=Arabidopsis thaliana GN=TPK3 PE=2 SV=1

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/327 (62%), Positives = 250/327 (76%), Gaps = 3/327 (0%)

Query: 59  ESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVV 118
           ++S+  +  +LHRSKTAPA+ V+ D+     Q   P   S  ++RQAF LL +YL +GV+
Sbjct: 108 QTSSHCQGHALHRSKTAPAMAVINDLHHPIRQ-KDPTETSRSVVRQAFALLVVYLSLGVL 166

Query: 119 IYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDI 178
           IY  N DH+   +THPVVD LYFCIVTMCTIGYGDI P +  TK+F+ +FVLVGFGFIDI
Sbjct: 167 IYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVLVGFGFIDI 226

Query: 179 LLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLC 238
           LLSG+V+YVLDLQE+ +L   +  +  E    R YI+DV KGRMRIRLKV LALGVVVLC
Sbjct: 227 LLSGMVSYVLDLQESYMLDSAK--RRDEPEKRRSYIIDVKKGRMRIRLKVALALGVVVLC 284

Query: 239 IAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARA 298
           IA+G  I+ F+E++ WLDSFYLSVMSVTTVGYGDRAFKTLPGR FAAIWLL STL VARA
Sbjct: 285 IAVGVGIMHFIEEIGWLDSFYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLAVARA 344

Query: 299 FLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEK 358
           FLYLAEAR+DKR+R  AK VL   +++    AAD+++NG +SK+EYVI+KLKEM KI +K
Sbjct: 345 FLYLAEARVDKRNRERAKKVLCETMSVSQFFAADIDNNGCVSKAEYVIYKLKEMEKITDK 404

Query: 359 DISQICNQFNRLDPNNCGKITLPDLLE 385
           DI  I  QF++LD  + GKITL DLLE
Sbjct: 405 DILPISKQFDKLDRCSNGKITLLDLLE 431

Probable voltage-independent potassium-selective tonoplast ion channel.

Arabidopsis thaliana (taxid: 3702)

>sp|Q69TN4|KCO3_ORYSJ Two pore potassium channel c OS=Oryza sativa subsp. japonica GN=TPKC PE=3 SV=1

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/328 (57%), Positives = 241/328 (73%), Gaps = 9/328 (2%)

Query: 68  SLHRSKTAPALVVLRDVQQQT------SQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYS 121
           +LHRS+TAPA+  L             S+ P P      I+  AF+ L  YL +GV  Y+
Sbjct: 115 NLHRSRTAPAMAPLNAAAIAAAAASGDSRNPPPPPRRPAIVLHAFLFLLAYLAMGVTFYA 174

Query: 122 FNTDHF--SGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL 179
               +F  S   THPV DALYFCIVT+CTIGYGDI P TPA K+F+  FVL+GFGF+DIL
Sbjct: 175 ALPGNFTSSAGPTHPVADALYFCIVTLCTIGYGDITPATPAAKLFSISFVLIGFGFVDIL 234

Query: 180 LSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCI 239
           LSG+V+YVLDLQE++++T ++  +        +YI D+ KGRMR+R+KV LAL VV +C+
Sbjct: 235 LSGMVSYVLDLQEHLLITALKNPRSVRKHR-HNYIFDLKKGRMRVRMKVALALTVVAICV 293

Query: 240 AIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAF 299
            +GA +L  +E+L WLD+ YL+VMSVTTVGYGD AF+TL GR FA+ WLL STL VARAF
Sbjct: 294 GVGAAVLKRVENLGWLDAVYLAVMSVTTVGYGDHAFRTLAGRLFASAWLLVSTLAVARAF 353

Query: 300 LYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKD 359
           LYLAE RIDKRHR +A WVL R++T+ + LAAD+++NG+++KSE+V++KLKEMGKI EKD
Sbjct: 354 LYLAEMRIDKRHRAMANWVLSRDMTVSEFLAADIDNNGYVTKSEFVVYKLKEMGKISEKD 413

Query: 360 ISQICNQFNRLDPNNCGKITLPDLLENH 387
           I  IC+QF R+D  NCGKITL DLLE+H
Sbjct: 414 IMMICDQFQRMDSGNCGKITLSDLLESH 441

Inward-rectifying potassium channel.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FL25|TPK2_ARATH Two-pore potassium channel 2 OS=Arabidopsis thaliana GN=TPK2 PE=2 SV=1

 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/321 (58%), Positives = 236/321 (73%), Gaps = 2/321 (0%)

Query: 68  SLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHF 127
           + HRSKTAPA+  + ++          +S+S  I+ QA  LL +YL +GV+IY  N D +
Sbjct: 112 NFHRSKTAPAMAAINNISHPNDPKTDQQSDSKTIVNQAVALLVVYLSLGVLIYWLNRDSY 171

Query: 128 SGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYV 187
           +  +THPVVDALYFCIVTMCTIGYGDI P +  TK+F+  FVLVGFGF+DILLSG+V YV
Sbjct: 172 NVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYV 231

Query: 188 LDLQENMILTGIQMG--KVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALI 245
           LDLQEN +L   +     + +    R YI+DV KGRMRIRLKVGLALGVVVLC+  G LI
Sbjct: 232 LDLQENYMLETARNESLNLNDRDKVRSYIIDVKKGRMRIRLKVGLALGVVVLCLGFGVLI 291

Query: 246 LFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEA 305
           + F+E + WLDSFY SVMSVTTVGYGDRAF TL GR  AA+WLL STL VARA L+LAE+
Sbjct: 292 MHFVEKIGWLDSFYFSVMSVTTVGYGDRAFNTLAGRLLAAMWLLVSTLAVARAILFLAES 351

Query: 306 RIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICN 365
           R+DKR+R  AK VL   ++I   L AD++ NG +SK+E+VI+KLK+M KI EKDI+ I  
Sbjct: 352 RVDKRNRERAKKVLGESMSISQFLDADIDCNGCVSKAEFVIYKLKKMDKITEKDINPIGF 411

Query: 366 QFNRLDPNNCGKITLPDLLEN 386
           QF++LD  N G+ITL DLLE+
Sbjct: 412 QFDKLDRTNSGRITLLDLLES 432

Probable voltage-independent potassium-selective tonoplast ion channel.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX6|TPK4_ARATH Two-pore potassium channel 4 OS=Arabidopsis thaliana GN=TPK4 PE=2 SV=2

 Score =  223 bits (567), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/287 (45%), Positives = 170/287 (59%), Gaps = 30/287 (10%)

Query: 85  QQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIV 144
           + Q + V K K     I+  A +LL +YL  GV  YSF  D FSG ET+  VDA YF IV
Sbjct: 21  ETQVTTVSKSKWT---ILVLAMILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIV 77

Query: 145 TMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKV 204
           T  T+GYGDI P T  TK+   + V  G  F+D LL+ VV++VL LQEN IL  I   + 
Sbjct: 78  TFSTVGYGDIVPSTSTTKILTIVLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINKTRN 137

Query: 205 KEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMS 264
           +   + RD+I +   G++R++ K+ LA   V LC+  GAL L   E LDWLDS YLSV+S
Sbjct: 138 R---AIRDHIAE--DGKIRLKWKLCLAFCAVGLCVGSGALFLHVFERLDWLDSVYLSVIS 192

Query: 265 VTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREIT 324
           VTTVGYGD+ FKT+ GR FA  WLL ST+ +A  FLYLAE RID+              T
Sbjct: 193 VTTVGYGDKTFKTVEGRGFAVFWLLLSTIAMATLFLYLAEMRIDR-------------TT 239

Query: 325 IDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLD 371
           +  L           S+SE+++FKL+E G+I E DI QI  +F  L+
Sbjct: 240 VMKLPP---------SESEFIVFKLRESGRISEDDIKQIVREFENLE 277

Voltage-independent, instantaneously activating, potassium-selective plasma membrane ion channel. Open rectifier. Regulated by cytoplasmic pH and extra-cellular calcium. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+) or Li(+).

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LBL1|TPK1_ARATH Two-pore potassium channel 1 OS=Arabidopsis thaliana GN=TPK1 PE=1 SV=2

 Score =  218 bits (555), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 178/283 (62%), Gaps = 5/283 (1%)

Query: 102 IRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPAT 161
           +R+  + L++YL +G + +    D  SG +T  VVDALYFCIVTM T+GYGD+ P + A+
Sbjct: 76  LRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSAS 135

Query: 162 KVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGR 221
           ++ AC FV  G   +  LLS   +Y+++ QE +++    +   ++ F   D + ++   +
Sbjct: 136 RLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHL---RQSFGPTDILKELHTNK 192

Query: 222 MRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGR 281
           +R +      L +VVL I +G + L  +E +  + +FY    +VTT+GYGD++F +  GR
Sbjct: 193 LRYKC-YATCLVLVVLFI-VGTIFLVMVEKMPVISAFYCVCSTVTTLGYGDKSFNSEAGR 250

Query: 282 FFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISK 341
            FA  W+L S++ +A+ FLY+AE   + + R + KWVL R IT +DL AAD++ +G +  
Sbjct: 251 LFAVFWILTSSICLAQFFLYVAELNTENKQRALVKWVLTRRITNNDLEAADLDEDGVVGA 310

Query: 342 SEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL 384
           +E++++KLKEMGKI EKDIS I ++F +LD +  G +T  D++
Sbjct: 311 AEFIVYKLKEMGKIDEKDISGIMDEFEQLDYDESGTLTTSDIV 353

Voltage-independent, large conductance and potassium-selective tonoplast ion channel. Regulated by cytoplasmic calcium and pH. Does not mediate slow-vacuolar (SV) ionic currents, but essential to establish VK currents. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+), Cs(+) or Li(+). Involved in intracellular K(+) redistribution and/or K(+) retranslocation between different tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LIN5|KCO2_ORYSJ Two pore potassium channel b OS=Oryza sativa subsp. japonica GN=TPKB PE=1 SV=1

 Score =  199 bits (505), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 160/267 (59%), Gaps = 11/267 (4%)

Query: 117 VVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            + +    DH SG  T   +DALYFC+VTM T+GYGD+ P + A K+ AC FV  G   +
Sbjct: 80  TIAFYLAMDHMSGTRTTRALDALYFCVVTMTTVGYGDLVPASDAAKLLACAFVFAGVAVV 139

Query: 177 DILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVV 236
              LS   +Y+++ QE ++   +             + +  A    ++R K+  A  ++V
Sbjct: 140 GTFLSKAADYLVEKQEALLFRALH-----------SHTMVRAMEMNKVRYKLYTAGLLLV 188

Query: 237 LCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVA 296
             +A G ++L+ +E +  +D+FY    +VTT+GYGDR+F +  GR FA  W+  ST++VA
Sbjct: 189 AAVASGTVVLWKVEGMRAVDAFYCVCATVTTLGYGDRSFSSEGGRAFAVAWITVSTVVVA 248

Query: 297 RAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIG 356
             FLY AE   ++R R +A+WVL+R  T  DL AAD++ +  +  +++V++KLKE+GKI 
Sbjct: 249 LFFLYAAELYTERRQRELARWVLRRRTTNMDLEAADLDGDHRVGAADFVLYKLKELGKIS 308

Query: 357 EKDISQICNQFNRLDPNNCGKITLPDL 383
           ++DIS+  ++F+ LD ++ G ++  DL
Sbjct: 309 QEDISEFLDEFDNLDADHSGTLSPADL 335

Highly selective inward-rectifying potassium channel that is specifically located in the tonoplast of protein storage vacuoles. Functions independently of the voltage difference across the membrane.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q850M0|KCO1_ORYSJ Two pore potassium channel a OS=Oryza sativa subsp. japonica GN=TPKA PE=1 SV=1

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 186/317 (58%), Gaps = 7/317 (2%)

Query: 69  LHRSKTAPALVVLRDVQQQTSQVPKPK--SESSFIIRQAFVLLSIYLFVGVVIYSFNTDH 126
             R ++ P+   L+   ++ S V   +   E     R   +LL IYL VGV+ +    D 
Sbjct: 29  FRRCRSTPSTDPLQGPPEKGSSVKAKELFKEMRPSFRLVGLLLFIYLLVGVLAFYAVMDE 88

Query: 127 FSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNY 186
            SG  T+ V+DALYFC+VTM T+GYGD+ P    TK+ AC FV +G   + + +S V +Y
Sbjct: 89  ISGKRTNRVLDALYFCVVTMTTVGYGDLVPNNDTTKLLACAFVFMGMAVVALFVSKVADY 148

Query: 187 VLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALIL 246
           +++ QE +    +    +K G +     ++      RI+ K      ++VL I  G + L
Sbjct: 149 LVEKQEVLFFKALHTN-LKGGETKMLRAIETN----RIKYKFYTNALLLVLSIISGTVFL 203

Query: 247 FFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEAR 306
           + +E L  +DSFY    ++TT+GYGD++F +  GR FA  W++ ST+++A+ F+YLAE  
Sbjct: 204 WKVEKLSLVDSFYCVCATITTLGYGDKSFSSKLGRVFAVFWIITSTIIMAQFFMYLAEIY 263

Query: 307 IDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQ 366
            ++R + +A WVL R++T  DL AAD++ +  +  +E+V++KLKE+GKI +++IS    +
Sbjct: 264 TERRQKMLANWVLTRKMTKMDLEAADLDDDRQVGAAEFVVYKLKELGKINQEEISSFLEE 323

Query: 367 FNRLDPNNCGKITLPDL 383
           F +LD ++ G ++  DL
Sbjct: 324 FEKLDVDHSGTLSPYDL 340

Highly selective inward-rectifying potassium channel that is specifically located in the tonoplast of large vacuoles. Functions independently of the voltage difference across the membrane.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9XFR0|KCO3_ARATH Potassium inward rectifier (Kir)-like channel 3 OS=Arabidopsis thaliana GN=KCO3 PE=1 SV=1

 Score =  167 bits (422), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 3/158 (1%)

Query: 226 LKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAA 285
           + V L   VV  C   G LI+ F+  + WLDSF  SVM VTTVG+GDRAF T  G F AA
Sbjct: 100 VAVALYFFVVTFC---GFLIVHFVVKIGWLDSFCFSVMMVTTVGFGDRAFNTWLGTFLAA 156

Query: 286 IWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYV 345
           +WLL STL VARAFL+LA+AR DKR+R  AK VL   I+I    AAD++++G +S +E+ 
Sbjct: 157 VWLLVSTLAVARAFLFLADARADKRNRERAKKVLGESISISQFFAADIDNDGRLSLAEFA 216

Query: 346 IFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL 383
           I+KLK+M KI ++D  QICNQF++LD    G+ITL DL
Sbjct: 217 IYKLKQMEKITQEDFIQICNQFDKLDRTQSGRITLVDL 254

Probable calcium-activated potassium channel.

Arabidopsis thaliana (taxid: 3702)

>sp|P40310|TOK1_YEAST Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1

 Score = 66.2 bits (160), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 22/198 (11%)

Query: 107 VLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFAC 166
           VLLS++L  G  +       FSG+      +ALYFC V++ T+G GDI P +   K+   
Sbjct: 253 VLLSLWLIWGAGM-------FSGLLHITYGNALYFCTVSLLTVGLGDILPKSVGAKIMVL 305

Query: 167 LFVLVGFGFIDILL----------SGVVNYVLDLQENMILTGIQMGKVKEGFSARDYI-- 214
           +F L G   + +++          SG + +   +++    +        +  S R+    
Sbjct: 306 IFSLSGVVLMGLIVFMTRSIIQKSSGPIFFFHRVEKGRSKSWKHYMDSSKNLSEREAFDL 365

Query: 215 ---VDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYG 271
              +     R +    + + + + +    +GAL+  F E+  + +  Y   + + T+GYG
Sbjct: 366 MKCIRQTASRKQHWFSLSVTIAIFMAFWLLGALVFKFAENWSYFNCIYFCFLCLLTIGYG 425

Query: 272 DRAFKTLPGRFFAAIWLL 289
           D A +T  GR F  IW L
Sbjct: 426 DYAPRTGAGRAFFVIWAL 443

Outwardly rectifying potassium channel.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
255548265	390	Calcium-activated outward-rectifying pot	0.987	0.982	0.762	1e-165
224068707	379	outward rectifying potassium channel [Po	0.969	0.992	0.734	1e-158
147818960	390	hypothetical protein VITISV_040173 [Viti	0.989	0.984	0.728	1e-154
225437793	390	PREDICTED: probable calcium-activated ou	0.989	0.984	0.725	1e-154
224128167	318	outward rectifying potassium channel [Po	0.814	0.993	0.820	1e-152
356503966	376	PREDICTED: probable calcium-activated ou	0.963	0.994	0.694	1e-151
356572840	385	PREDICTED: probable calcium-activated ou	0.963	0.971	0.688	1e-149
357511543	382	Outward rectifying potassium channel [Me	0.873	0.887	0.736	1e-142
297814143	406	hypothetical protein ARALYDRAFT_490395 [	0.976	0.933	0.606	1e-131
15234351	408	putative calcium-activated outward-recti	0.987	0.938	0.594	1e-128

>gi|255548265|ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis] gi|223545669|gb|EEF47173.1| Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/395 (76%), Positives = 337/395 (85%), Gaps = 12/395 (3%)

Query: 1   MEQEPFLGSQTRPQHQ--LEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQA-- 56
           ME EPFL SQTRPQ Q  L++ILE    HD   T+  SLSSP +F+EI+  +QP S A  
Sbjct: 1   MENEPFLASQTRPQSQPQLQSILER---HDLSFTLSPSLSSPILFSEIQ--EQPVSTAIL 55

Query: 57  PPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVG 116
              S+   KPGSLHRSKTAPA+VV+RD++    Q PKP+SESS IIRQA  LL +YL +G
Sbjct: 56  GAPSTQRKKPGSLHRSKTAPAMVVMRDLKPLPPQDPKPQSESSSIIRQAIFLLFLYLLLG 115

Query: 117 VVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
           VVIYSFN D+FSG+ETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFAC+FVLVGFGFI
Sbjct: 116 VVIYSFNRDNFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFGFI 175

Query: 177 DILLSGVVNYVLDLQENMILTGIQMGKVK---EGFSARDYIVDVAKGRMRIRLKVGLALG 233
           DILLSGVVNYVLDLQE+MIL GIQMG  +   EGFSAR+YIVDV KGRMRIRLKVGLALG
Sbjct: 176 DILLSGVVNYVLDLQESMILAGIQMGNNRTAHEGFSARNYIVDVEKGRMRIRLKVGLALG 235

Query: 234 VVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTL 293
           VVVLCI IG L+L++LEDLD +DS YL+VMSVTTVGYGDR FKTLPGR FAAIWLL S+L
Sbjct: 236 VVVLCIGIGTLVLYYLEDLDCIDSIYLAVMSVTTVGYGDRVFKTLPGRLFAAIWLLVSSL 295

Query: 294 MVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMG 353
            VARAFLYLAEARIDKRHRRI KWVL R+IT++DL+AAD+N+NGFISKSEYVI+KLKEMG
Sbjct: 296 AVARAFLYLAEARIDKRHRRITKWVLHRDITVEDLIAADINNNGFISKSEYVIYKLKEMG 355

Query: 354 KIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL 388
           KIGEKDI QICNQF++LDPNN GKITLPDLLEN L
Sbjct: 356 KIGEKDILQICNQFSKLDPNNLGKITLPDLLENRL 390

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068707|ref|XP_002302805.1| outward rectifying potassium channel [Populus trichocarpa] gi|222844531|gb|EEE82078.1| outward rectifying potassium channel [Populus trichocarpa]

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/391 (73%), Positives = 329/391 (84%), Gaps = 15/391 (3%)

Query: 1   MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPES 60
           ME E FLG+Q            + H+     T+ QSLS+P +F+EI++     S  P  S
Sbjct: 1   MENELFLGNQ------------KTHEPQPFITLTQSLSTPLLFHEIQDEPTTPSPPPGPS 48

Query: 61  STTWK-PGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVI 119
           +T +K PG+LHRSKTAPA+VV+R+ Q    Q+PKP+SES+ IIRQA  LLS+YL +GVVI
Sbjct: 49  NTRFKKPGTLHRSKTAPAMVVMREFQPTKPQIPKPQSESNSIIRQAIFLLSLYLLLGVVI 108

Query: 120 YSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL 179
           YSFNTDHFSG ETHPVVDALYFCIVTMCTIGYGDIAPLTP TKVFAC+FVLVGFGFIDIL
Sbjct: 109 YSFNTDHFSGTETHPVVDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDIL 168

Query: 180 LSGVVNYVLDLQENMILTGIQMGKVK--EGFSARDYIVDVAKGRMRIRLKVGLALGVVVL 237
           LSG+VNYVLDLQE+MILTGI+M K +  EGFSA DYI+DV KGRMRIRLKVGLALGVV+L
Sbjct: 169 LSGLVNYVLDLQESMILTGIEMSKNRNREGFSAADYIIDVKKGRMRIRLKVGLALGVVIL 228

Query: 238 CIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVAR 297
           CI IG L+L+FLEDLDW+DS YL+VMSVTTVGYGDRAFK+LPGR FAAIWLL STL VAR
Sbjct: 229 CIGIGTLVLYFLEDLDWIDSVYLAVMSVTTVGYGDRAFKSLPGRLFAAIWLLVSTLAVAR 288

Query: 298 AFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGE 357
           AFLYLAEARIDKRHRRI+ WVL R+IT++DLLAADMN+NGFISKSEYVI+KLKEMGKIGE
Sbjct: 289 AFLYLAEARIDKRHRRISNWVLHRDITVEDLLAADMNNNGFISKSEYVIYKLKEMGKIGE 348

Query: 358 KDISQICNQFNRLDPNNCGKITLPDLLENHL 388
           KD+ QICNQF++LDPNN GKITLPDLL + L
Sbjct: 349 KDVLQICNQFSKLDPNNLGKITLPDLLGHRL 379

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818960|emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/390 (72%), Positives = 326/390 (83%), Gaps = 6/390 (1%)

Query: 1   MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPES 60
           +E EPFL S+  P  ++E  +E E + +     P ++S P I N+    D     AP  S
Sbjct: 5   LEGEPFLSSRLEPILEVEVEVETEGEGEVDDQFPFNISEPTISNQ----DIRDPCAPGPS 60

Query: 61  STTWKP-GSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVI 119
           +T + P  ++HR KTAPAL V+RD + Q +Q+PKP S+S+ IIRQAF LL +YL +GVVI
Sbjct: 61  TTHFLPRKTIHRCKTAPALAVMRDAKSQPAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVI 120

Query: 120 YSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL 179
           YSFN D+FSG+ETH VVDALYFCIVTMCTIGYGDIAPLTPATKVFAC+FVLVGFGFIDIL
Sbjct: 121 YSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFGFIDIL 180

Query: 180 LSGVVNYVLDLQENMILTGIQMGKVKEG-FSARDYIVDVAKGRMRIRLKVGLALGVVVLC 238
           LSGVVNYVLDLQENMILTGIQ+G    G FSAR+YIVDV KGRMRIRLKVGLALGVVVLC
Sbjct: 181 LSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALGVVVLC 240

Query: 239 IAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARA 298
           I +G ++L+F+E+LDW+D+ YLSVMSVTTVGYGDRAFKTLPGR FAAIWLLFSTL VARA
Sbjct: 241 IGMGTMVLYFVENLDWIDAVYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLAVARA 300

Query: 299 FLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEK 358
           FLYLAEARIDKRHRRI KWVL REIT++DLLAAD+N+NGFISKSEYVI+KLKEMGKI E 
Sbjct: 301 FLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFISKSEYVIYKLKEMGKIAEN 360

Query: 359 DISQICNQFNRLDPNNCGKITLPDLLENHL 388
           D+ QICNQFN+LDPNN GKITLPDLLENHL
Sbjct: 361 DVLQICNQFNKLDPNNSGKITLPDLLENHL 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437793|ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium channel 5, chloroplastic [Vitis vinifera]

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/390 (72%), Positives = 326/390 (83%), Gaps = 6/390 (1%)

Query: 1   MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPES 60
           +E EPFL S+  P  ++E  +E E + +     P ++S P I N+    D     AP  S
Sbjct: 5   LEGEPFLSSRLEPILEVEVEVETEGEGEVDDQFPFNISEPTISNQ----DIRDPCAPGPS 60

Query: 61  STTWKP-GSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVI 119
           +T + P  ++HR KTAPAL V+RD + Q +Q+PKP S+S+ IIRQAF LL +YL +GVVI
Sbjct: 61  TTHFLPRKTIHRCKTAPALAVMRDAKSQPAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVI 120

Query: 120 YSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL 179
           YSFN D+FSG+ETH VVDALYFCIVTMCTIGYGDIAPLTPATKVFAC+FVLVGFGFIDIL
Sbjct: 121 YSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFGFIDIL 180

Query: 180 LSGVVNYVLDLQENMILTGIQMGKVKEG-FSARDYIVDVAKGRMRIRLKVGLALGVVVLC 238
           LSGVVNYVLDLQENMILTGIQ+G    G FSAR+YIVDV KGRMRIRLKVGLALGVVVLC
Sbjct: 181 LSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALGVVVLC 240

Query: 239 IAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARA 298
           I +G ++L+F+E+LDW+D+ YLSVMSVT+VGYGDRAFKTLPGR FAAIWLLFSTL VARA
Sbjct: 241 IGMGTMVLYFVENLDWIDAVYLSVMSVTSVGYGDRAFKTLPGRLFAAIWLLFSTLAVARA 300

Query: 299 FLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEK 358
           FLYLAEARIDKRHRRI KWVL REIT++DLLAAD+N+NGFISKSEYVI+KLKEMGKI E 
Sbjct: 301 FLYLAEARIDKRHRRITKWVLHREITVEDLLAADINNNGFISKSEYVIYKLKEMGKIAEN 360

Query: 359 DISQICNQFNRLDPNNCGKITLPDLLENHL 388
           D+ QICNQFN+LDPNN GKITLPDLLENHL
Sbjct: 361 DVLQICNQFNKLDPNNSGKITLPDLLENHL 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128167|ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa] gi|222861033|gb|EEE98575.1| outward rectifying potassium channel [Populus trichocarpa]

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/318 (82%), Positives = 288/318 (90%), Gaps = 2/318 (0%)

Query: 69  LHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFS 128
           LHR KTAPA+VV+R+ Q    Q+PKP+ +S+ IIRQA  LLS+YL +GV+IYSFNTDHFS
Sbjct: 1   LHRCKTAPAMVVMREFQPTKPQIPKPQPDSTSIIRQATFLLSMYLLLGVIIYSFNTDHFS 60

Query: 129 GVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVL 188
           G+ETHPVVDALYFCIVTMCTIGYGDI PLTP TKVFAC+FVLVGFGFIDILLSG+VNYVL
Sbjct: 61  GIETHPVVDALYFCIVTMCTIGYGDITPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVL 120

Query: 189 DLQENMILTGIQMGKVK--EGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALIL 246
           DLQE+MILTGI+MGK +  EGFSA DYI DV KGRMRIRLKVGLALGVVVLCI IG L+L
Sbjct: 121 DLQESMILTGIEMGKNRNHEGFSATDYIFDVKKGRMRIRLKVGLALGVVVLCIGIGTLVL 180

Query: 247 FFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEAR 306
           +FLEDLDW+DS YL+VMSVTTVGYGDRAFKTLPGR FAAIWLL STL VARAFLYLAEAR
Sbjct: 181 YFLEDLDWIDSVYLAVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLAVARAFLYLAEAR 240

Query: 307 IDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQ 366
           IDKRHRRI  WVL R+IT++DLLAADMN+NGFISKSEYVI+KLKEMGKIGEKDI QICNQ
Sbjct: 241 IDKRHRRITNWVLHRDITVEDLLAADMNNNGFISKSEYVIYKLKEMGKIGEKDILQICNQ 300

Query: 367 FNRLDPNNCGKITLPDLL 384
           F++LDPNN GKITLPDLL
Sbjct: 301 FSKLDPNNLGKITLPDLL 318

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503966|ref|XP_003520770.1| PREDICTED: probable calcium-activated outward-rectifying potassium channel 5, chloroplastic-like [Glycine max]

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/390 (69%), Positives = 313/390 (80%), Gaps = 16/390 (4%)

Query: 1   MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPES 60
           ME EPFL + T  Q   + +L      + + T  ++  +     EI    Q + Q PP  
Sbjct: 1   MEDEPFLLTTTTSQPITDFLLPSSKSFNDVTTTTRARDAAA--QEI----QSEQQQPP-- 52

Query: 61  STTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIY 120
               K   L R KTAPA+V +RD++ +T Q+PKP++ S  IIRQ   LL++YL +GV IY
Sbjct: 53  ----KKKKLSRCKTAPAMVTMRDLKPKTPQLPKPQTSS--IIRQGIWLLAMYLSIGVAIY 106

Query: 121 SFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILL 180
           SFN D FSG+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK+FAC FVLVGFGFIDILL
Sbjct: 107 SFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKIFACAFVLVGFGFIDILL 166

Query: 181 SGVVNYVLDLQENMILTGIQMGKV--KEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLC 238
           SG+VN+VLDLQENMILTG+QMG    +EGFSAR+YIVDVAKGRMRIRLKVGLALGVVVLC
Sbjct: 167 SGLVNFVLDLQENMILTGLQMGASDQREGFSARNYIVDVAKGRMRIRLKVGLALGVVVLC 226

Query: 239 IAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARA 298
           I IG L+L+F+E LDW+DS YLSVMSVTTVGYGDRAFKTLPGR FAAIWLLFSTLMVARA
Sbjct: 227 IGIGGLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARA 286

Query: 299 FLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEK 358
           FLYLAEARID+RHRR+AK VL REIT++DLLAAD+N+ GFISKSEYVIFKLKEMGKI EK
Sbjct: 287 FLYLAEARIDRRHRRMAKKVLHREITVEDLLAADINNTGFISKSEYVIFKLKEMGKIQEK 346

Query: 359 DISQICNQFNRLDPNNCGKITLPDLLENHL 388
           D+ QIC+QF +LDP+NCGKITLP+LL   L
Sbjct: 347 DVLQICDQFRKLDPSNCGKITLPNLLGGSL 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572840|ref|XP_003554573.1| PREDICTED: probable calcium-activated outward-rectifying potassium channel 5, chloroplastic-like [Glycine max]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/389 (68%), Positives = 310/389 (79%), Gaps = 15/389 (3%)

Query: 1   MEQEPFLGSQTRPQHQLEAILEEEHDHDTLHTVPQSLSSPHIFNEIENLDQPQSQAPPES 60
           ME EPFL + ++P    + +L      + + T      +  +        Q + Q PP  
Sbjct: 11  MEDEPFLTTTSQPIA--DCLLPSSKSFNDVTTT----RARDVAAAAAEEIQSEQQQPP-- 62

Query: 61  STTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIY 120
               K   L R KTAPA+V +RD++ +T Q+PKP+S S  IIRQ   LL++YL +GVVIY
Sbjct: 63  ----KKKKLSRCKTAPAMVTMRDLKPKTPQLPKPQSSS--IIRQGMWLLAVYLSIGVVIY 116

Query: 121 SFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILL 180
           SFN D FSG+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK+FAC FVLVGFGFIDILL
Sbjct: 117 SFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKIFACAFVLVGFGFIDILL 176

Query: 181 SGVVNYVLDLQENMILTGIQMGKV-KEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCI 239
           SG+VN+VLDLQENMILTG+QMG   +EGFSAR+YIVDVAKGRMRIRLKVGLALGVVV+CI
Sbjct: 177 SGLVNFVLDLQENMILTGLQMGASEREGFSARNYIVDVAKGRMRIRLKVGLALGVVVMCI 236

Query: 240 AIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAF 299
            IG+L+L+F+E LDW+DS YLSVMSVTTVGYGDRAFKTLPGR FAAIWLLFSTLMVARAF
Sbjct: 237 GIGSLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAF 296

Query: 300 LYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKD 359
           LYLAEARID+RHRR+AK VL REIT+ DLLAAD+N+ GFISKSEYVIF LKEMGKI EKD
Sbjct: 297 LYLAEARIDRRHRRMAKKVLHREITVQDLLAADINNTGFISKSEYVIFMLKEMGKIQEKD 356

Query: 360 ISQICNQFNRLDPNNCGKITLPDLLENHL 388
           + QIC+QF +LDP+NCGKITLP LL   L
Sbjct: 357 VLQICDQFRKLDPSNCGKITLPHLLGGSL 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511543|ref|XP_003626060.1| Outward rectifying potassium channel [Medicago truncatula] gi|355501075|gb|AES82278.1| Outward rectifying potassium channel [Medicago truncatula]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/345 (73%), Positives = 293/345 (84%), Gaps = 6/345 (1%)

Query: 44  NEIENLD-QPQSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFII 102
           +EI++++  PQ Q    S +  K   L R KTAPA+ +L  ++    Q   PK +++ II
Sbjct: 42  SEIQSINFTPQQQ----SFSHHKQKKLSRCKTAPAMFILPHLKPINDQPQLPKPQTNSII 97

Query: 103 RQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATK 162
           RQ   LL IYL VGV+IYSFNT +FSG+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK
Sbjct: 98  RQGIWLLLIYLSVGVIIYSFNTKNFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPMTK 157

Query: 163 VFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRM 222
           +FAC+FVLVGFGFIDILLSG+VN+VLDLQEN ILTG+QMG  +EGF+ARDYIVDVAKGRM
Sbjct: 158 LFACVFVLVGFGFIDILLSGLVNFVLDLQENTILTGLQMG-AREGFTARDYIVDVAKGRM 216

Query: 223 RIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRF 282
           RIRLKVGLALGVVVLCI +G+L+L F+E LDW+DS YL+VMSVTTVGYGDRAFKTLPGR 
Sbjct: 217 RIRLKVGLALGVVVLCIGVGSLVLCFVEGLDWVDSIYLAVMSVTTVGYGDRAFKTLPGRL 276

Query: 283 FAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKS 342
           FAAIWLLFSTLMVARAFLYLAEARID+RHRR+AK VL REITI+D LAAD+N+ GFISKS
Sbjct: 277 FAAIWLLFSTLMVARAFLYLAEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFISKS 336

Query: 343 EYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENH 387
           EYVIFKLKEMGKI +KD+ QIC+QF +LDP+NCGKITLP LLE  
Sbjct: 337 EYVIFKLKEMGKIQDKDVMQICDQFRKLDPSNCGKITLPHLLEGR 381

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814143|ref|XP_002874955.1| hypothetical protein ARALYDRAFT_490395 [Arabidopsis lyrata subsp. lyrata] gi|297320792|gb|EFH51214.1| hypothetical protein ARALYDRAFT_490395 [Arabidopsis lyrata subsp. lyrata]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/404 (60%), Positives = 296/404 (73%), Gaps = 25/404 (6%)

Query: 2   EQEPFLGSQTRPQHQLEAILEEEHDHDTLH-TVPQSLSSPHIFNEIENLDQPQSQAPPES 60
             +P +  Q+R   +L+ I E      +   T+P+S+S+   F+EI        Q   ES
Sbjct: 3   NHQPLISPQSR--FRLQPIPENPDSSSSAAITIPRSISNTSFFHEISQERLLHHQDLEES 60

Query: 61  S-----------------TTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIR 103
                             +  +P  LHR +TAPA+V+++D++ +  +  KP   S  II+
Sbjct: 61  VQDDNDEDSDSDETNRFLSNTRP--LHRCRTAPAMVIIKDLRPKNQETKKPSPISKSIIK 118

Query: 104 QAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKV 163
           QA  LL IYL +GV IYSFN DH+SG+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK+
Sbjct: 119 QAIFLLVIYLTLGVSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKI 178

Query: 164 FACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEG---FSARDYIVDVAKG 220
           FA +FVL GFGF+DILLSGVVNYVLDLQE+MILTGIQ  +       FSA+DYI+D  KG
Sbjct: 179 FAVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTKQHHHHHHRFSAKDYIIDFEKG 238

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
           RMRIR+KVGLAL VVVLCI +GAL+L F+E+L ++DS YLSVMSVTTVGYGDRAFKTL G
Sbjct: 239 RMRIRMKVGLALCVVVLCIGVGALVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQG 298

Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFIS 340
           R FAA+WLL STL VARAFLYLAEARID+RHR+  K  L R+IT+DDLL AD  H+GFIS
Sbjct: 299 RLFAAVWLLVSTLAVARAFLYLAEARIDRRHRKAVKLALNRDITVDDLLKADTYHHGFIS 358

Query: 341 KSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL 384
           KSEY++FKLKEMGKI EKDI+Q+  QF +LDPNN GKITLPDLL
Sbjct: 359 KSEYIVFKLKEMGKITEKDINQVGMQFEKLDPNNLGKITLPDLL 402

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234351|ref|NP_192093.1| putative calcium-activated outward-rectifying potassium channel 5 [Arabidopsis thaliana] gi|38605077|sp|Q9S6Z8.1|TPK5_ARATH RecName: Full=Two-pore potassium channel 5; Short=AtTPK5; AltName: Full=Calcium-activated outward-rectifying potassium channel 5, chloroplastic; Short=AtKCO5 gi|4558553|gb|AAD22646.1|AC007138_10 putative potassium channel [Arabidopsis thaliana] gi|6522947|emb|CAB62162.1| KCO5 protein [Arabidopsis thaliana] gi|7268568|emb|CAB80677.1| putative potassium channel [Arabidopsis thaliana] gi|21537080|gb|AAM61421.1| putative potassium channel [Arabidopsis thaliana] gi|332656683|gb|AEE82083.1| putative calcium-activated outward-rectifying potassium channel 5 [Arabidopsis thaliana]

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/409 (59%), Positives = 296/409 (72%), Gaps = 26/409 (6%)

Query: 4   EPFLGSQTRPQHQLEAILEEEHDHDTLH--TVPQSLSSPHIFNEI---------ENLDQP 52
           EP +  Q  P+ +L+ I E      +    T+P+S+S+   F+EI         ++L+Q 
Sbjct: 2   EPLISPQ--PRFRLQPIPENPSSSSSSASITIPRSISNTSFFHEISQERLLLHHQDLEQS 59

Query: 53  --------QSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQ 104
                    S +   +    +   LHRS+TAPA+V+++D++ +  +  KP   S  IIRQ
Sbjct: 60  VQDDKEDQDSDSDETNRFLSQTRPLHRSRTAPAMVIIKDLRTKPPETKKPSPVSKSIIRQ 119

Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
           A  LL +YL +GV IYSFN DH+SG+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK+F
Sbjct: 120 AIFLLIVYLTLGVSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIF 179

Query: 165 ACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQ-----MGKVKEGFSARDYIVDVAK 219
           A +FVL GFGF+DILLSGVVNYVLDLQE+MILTGIQ            FSA+DYI+D  K
Sbjct: 180 AVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEK 239

Query: 220 GRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLP 279
           GRMRIR+KV LAL VVVLCI +GAL+L F+E+L ++DS YLSVMSVTTVGYGDRAFKTL 
Sbjct: 240 GRMRIRMKVCLALCVVVLCIGVGALVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQ 299

Query: 280 GRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFI 339
           GR FAA+WLL STL VARAFLYLAEARID+RHR+  K  L REIT+DDLL AD   +GFI
Sbjct: 300 GRLFAAVWLLVSTLAVARAFLYLAEARIDRRHRKAVKLALNREITVDDLLKADTYQHGFI 359

Query: 340 SKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLENHL 388
           SKSEY++ KLKEMGKI +KDI Q+  QF +LDPN  GKITLPDLL + L
Sbjct: 360 SKSEYIVLKLKEMGKITQKDIDQVVIQFEKLDPNQIGKITLPDLLGDPL 408

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
TAIR|locus:2141375	408	KCO5 "Ca2+ activated outward r	0.824	0.784	0.667	2.3e-114
TAIR|locus:2117681	436	KCO6 "Ca2+ activated outward r	0.855	0.761	0.582	9.7e-96
TAIR|locus:2170423	443	KCO2 "Ca2+ activated outward r	0.922	0.808	0.517	3.2e-88
TAIR|locus:2196155	284	TPK4 [Arabidopsis thaliana (ta	0.561	0.767	0.473	1.8e-54
TAIR|locus:2162162	363	KCO1 "CA2+ ACTIVATED OUTWARD R	0.801	0.856	0.347	3.5e-52
TAIR|locus:2170413	260	KCO3 "AT5G46360" [Arabidopsis	0.365	0.546	0.570	6.8e-49
UNIPROTKB|Q850M0	347	TPKA "Two pore potassium chann	0.793	0.887	0.346	1.8e-48
UNIPROTKB|Q8LIN5	349	TPKB "Two pore potassium chann	0.822	0.914	0.327	2.6e-47
UNIPROTKB|Q8E842	131	Q8E842 "Potassium/ion transpor	0.219	0.648	0.376	4.7e-09
TIGR_CMR|SO_A0098	131	SO_A0098 "potassium/ion transp	0.219	0.648	0.376	4.7e-09

TAIR|locus:2141375 KCO5 "Ca2+ activated outward rectifying K+ channel 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1098 (391.6 bits), Expect = 2.3e-114, Sum P(2) = 2.3e-114
 Identities = 217/325 (66%), Positives = 255/325 (78%)

Query:    69 LHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFS 128
             LHRS+TAPA+V+++D++ +  +  KP   S  IIRQA  LL +YL +GV IYSFN DH+S
Sbjct:    84 LHRSRTAPAMVIIKDLRTKPPETKKPSPVSKSIIRQAIFLLIVYLTLGVSIYSFNRDHYS 143

Query:   129 GVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVL 188
             G+ETHPVVDALYFCIVTMCTIGYGDIAPLTP TK+FA +FVL GFGF+DILLSGVVNYVL
Sbjct:   144 GIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSGVVNYVL 203

Query:   189 DLQENMILTGIQMGKVKEG-----FSARDYIVDVAKGRMRIRXXXXXXXXXXXXCIAIGA 243
             DLQE+MILTGIQ  +  +      FSA+DYI+D  KGRMRIR            CI +GA
Sbjct:   204 DLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEKGRMRIRMKVCLALCVVVLCIGVGA 263

Query:   244 LILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLA 303
             L+L F+E+L ++DS YLSVMSVTTVGYGDRAFKTL GR FAA+WLL STL VARAFLYLA
Sbjct:   264 LVLHFVEELGFVDSVYLSVMSVTTVGYGDRAFKTLQGRLFAAVWLLVSTLAVARAFLYLA 323

Query:   304 EARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQI 363
             EARID+RHR+  K  L REIT+DDLL AD   +GFISKSEY++ KLKEMGKI +KDI Q+
Sbjct:   324 EARIDRRHRKAVKLALNREITVDDLLKADTYQHGFISKSEYIVLKLKEMGKITQKDIDQV 383

Query:   364 CNQFNRLDPNNCGKITLPDLLENHL 388
               QF +LDPN  GKITLPDLL + L
Sbjct:   384 VIQFEKLDPNQIGKITLPDLLGDPL 408

GO:0005267 "potassium channel activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015271 "outward rectifier potassium channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2117681 KCO6 "Ca2+ activated outward rectifying K+ channel 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
 Identities = 195/335 (58%), Positives = 241/335 (71%)

Query:    51 QPQSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSESSFIIRQAFVLLS 110
             QP+     ++S+  +  +LHRSKTAPA+ V+ D+     Q   P   S  ++RQAF LL 
Sbjct:   100 QPEPWLSDQTSSHCQGHALHRSKTAPAMAVINDLHHPIRQ-KDPTETSRSVVRQAFALLV 158

Query:   111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
             +YL +GV+IY  N DH+   +THPVVD LYFCIVTMCTIGYGDI P +  TK+F+ +FVL
Sbjct:   159 VYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVL 218

Query:   171 VGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRXXXXX 230
             VGFGFIDILLSG+V+YVLDLQE+ +L   +     E    R YI+DV KGRMRIR     
Sbjct:   219 VGFGFIDILLSGMVSYVLDLQESYMLDSAKRRDEPE--KRRSYIIDVKKGRMRIRLKVAL 276

Query:   231 XXXXXXXCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLF 290
                    CIA+G  I+ F+E++ WLDSFYLSVMSVTTVGYGDRAFKTLPGR FAAIWLL 
Sbjct:   277 ALGVVVLCIAVGVGIMHFIEEIGWLDSFYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLV 336

Query:   291 STLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLK 350
             STL VARAFLYLAEAR+DKR+R  AK VL   +++    AAD+++NG +SK+EYVI+KLK
Sbjct:   337 STLAVARAFLYLAEARVDKRNRERAKKVLCETMSVSQFFAADIDNNGCVSKAEYVIYKLK 396

Query:   351 EMGKIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
             EM KI +KDI  I  QF++LD  + GKITL DLLE
Sbjct:   397 EMEKITDKDILPISKQFDKLDRCSNGKITLLDLLE 431

GO:0005267 "potassium channel activity" evidence=IEA

GO:0015271 "outward rectifier potassium channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2170423 KCO2 "Ca2+ activated outward rectifying K+ channel 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 188/363 (51%), Positives = 242/363 (66%)

Query:    28 DTLHTVPQSLSSPHI-FNEIENLDQPQSQAPPESSTTWKPG-SLHRSKTAPALVVLRDVQ 85
             D L   P + SS    F++  +L  P ++ P +     KP  + HRSKTAPA+  + ++ 
Sbjct:    71 DALSQNPSTSSSATTSFSDSTDLLLPLTE-PNKPVRKSKPTINFHRSKTAPAMAAINNIS 129

Query:    86 QQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVT 145
                      +S+S  I+ QA  LL +YL +GV+IY  N D ++  +THPVVDALYFCIVT
Sbjct:   130 HPNDPKTDQQSDSKTIVNQAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVT 189

Query:   146 MCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVK 205
             MCTIGYGDI P +  TK+F+  FVLVGFGF+DILLSG+V YVLDLQEN +L   +   + 
Sbjct:   190 MCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYVLDLQENYMLETARNESLN 249

Query:   206 --EGFSARDYIVDVAKGRMRIRXXXXXXXXXXXXCIAIGALILFFLEDLDWLDSFYLSVM 263
               +    R YI+DV KGRMRIR            C+  G LI+ F+E + WLDSFY SVM
Sbjct:   250 LNDRDKVRSYIIDVKKGRMRIRLKVGLALGVVVLCLGFGVLIMHFVEKIGWLDSFYFSVM 309

Query:   264 SVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREI 323
             SVTTVGYGDRAF TL GR  AA+WLL STL VARA L+LAE+R+DKR+R  AK VL   +
Sbjct:   310 SVTTVGYGDRAFNTLAGRLLAAMWLLVSTLAVARAILFLAESRVDKRNRERAKKVLGESM 369

Query:   324 TIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL 383
             +I   L AD++ NG +SK+E+VI+KLK+M KI EKDI+ I  QF++LD  N G+ITL DL
Sbjct:   370 SISQFLDADIDCNGCVSKAEFVIYKLKKMDKITEKDINPIGFQFDKLDRTNSGRITLLDL 429

Query:   384 LEN 386
             LE+
Sbjct:   430 LES 432

GO:0005267 "potassium channel activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0015271 "outward rectifier potassium channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2196155 TPK4 [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
 Identities = 106/224 (47%), Positives = 138/224 (61%)

Query:    86 QQTSQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVT 145
             ++T      KS+ + ++  A +LL +YL  GV  YSF  D FSG ET+  VDA YF IVT
Sbjct:    20 EETQVTTVSKSKWTILVL-AMILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIVT 78

Query:   146 MCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVK 205
               T+GYGDI P T  TK+   + V  G  F+D LL+ VV++VL LQEN IL  I   + +
Sbjct:    79 FSTVGYGDIVPSTSTTKILTIVLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINKTRNR 138

Query:   206 EGFSARDYIVDVAKGRMRIRXXXXXXXXXXXXCIAIGALILFFLEDLDWLDSFYLSVMSV 265
                + RD+I +   G++R++            C+  GAL L   E LDWLDS YLSV+SV
Sbjct:   139 ---AIRDHIAE--DGKIRLKWKLCLAFCAVGLCVGSGALFLHVFERLDWLDSVYLSVISV 193

Query:   266 TTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDK 309
             TTVGYGD+ FKT+ GR FA  WLL ST+ +A  FLYLAE RID+
Sbjct:   194 TTVGYGDKTFKTVEGRGFAVFWLLLSTIAMATLFLYLAEMRIDR 237

GO:0005267 "potassium channel activity" evidence=IEA

GO:0015271 "outward rectifier potassium channel activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

TAIR|locus:2162162 KCO1 "CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 112/322 (34%), Positives = 185/322 (57%)

Query:    69 LHRSKTAP-ALVVLRDVQQQTSQVPKPKSESSFI-----IRQAFVLLSIYLFVGVVIYSF 122
             L RS++AP    +  D  +     P P     F      +R+  + L++YL +G + +  
Sbjct:    37 LRRSRSAPRGDCMYNDDVKIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYL 96

Query:   123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSG 182
               D  SG +T  VVDALYFCIVTM T+GYGD+ P + A+++ AC FV  G   +  LLS 
Sbjct:    97 VRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSR 156

Query:   183 VVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRXXXXXXXXXXXXCIAIG 242
               +Y+++ QE +++    +   ++ F   D + ++   ++R +               +G
Sbjct:   157 AADYLVEKQEALLVRAFHL---RQSFGPTDILKELHTNKLRYKCYATCLVLVVL--FIVG 211

Query:   243 ALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYL 302
              + L  +E +  + +FY    +VTT+GYGD++F +  GR FA  W+L S++ +A+ FLY+
Sbjct:   212 TIFLVMVEKMPVISAFYCVCSTVTTLGYGDKSFNSEAGRLFAVFWILTSSICLAQFFLYV 271

Query:   303 AEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQ 362
             AE   + + R + KWVL R IT +DL AAD++ +G +  +E++++KLKEMGKI EKDIS 
Sbjct:   272 AELNTENKQRALVKWVLTRRITNNDLEAADLDEDGVVGAAEFIVYKLKEMGKIDEKDISG 331

Query:   363 ICNQFNRLDPNNCGKITLPDLL 384
             I ++F +LD +  G +T  D++
Sbjct:   332 IMDEFEQLDYDESGTLTTSDIV 353

GO:0005267 "potassium channel activity" evidence=IEA

GO:0015271 "outward rectifier potassium channel activity" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005216 "ion channel activity" evidence=IDA

GO:0051260 "protein homooligomerization" evidence=IPI

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0030007 "cellular potassium ion homeostasis" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

GO:0015269 "calcium-activated potassium channel activity" evidence=IDA

TAIR|locus:2170413 KCO3 "AT5G46360" [Arabidopsis thaliana (taxid:3702)]

 Score = 400 (145.9 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
 Identities = 81/142 (57%), Positives = 104/142 (73%)

Query:   242 GALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLY 301
             G LI+ F+  + WLDSF  SVM VTTVG+GDRAF T  G F AA+WLL STL VARAFL+
Sbjct:   113 GFLIVHFVVKIGWLDSFCFSVMMVTTVGFGDRAFNTWLGTFLAAVWLLVSTLAVARAFLF 172

Query:   302 LAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDIS 361
             LA+AR DKR+R  AK VL   I+I    AAD++++G +S +E+ I+KLK+M KI ++D  
Sbjct:   173 LADARADKRNRERAKKVLGESISISQFFAADIDNDGRLSLAEFAIYKLKQMEKITQEDFI 232

Query:   362 QICNQFNRLDPNNCGKITLPDL 383
             QICNQF++LD    G+ITL DL
Sbjct:   233 QICNQFDKLDRTQSGRITLVDL 254

GO:0005509 "calcium ion binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015271 "outward rectifier potassium channel activity" evidence=ISS

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0051260 "protein homooligomerization" evidence=IPI

GO:0006863 "purine nucleobase transport" evidence=RCA

UNIPROTKB|Q850M0 TPKA "Two pore potassium channel a" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 109/315 (34%), Positives = 181/315 (57%)

Query:    71 RSKTAPALVVLRDVQQQTSQVPKPK--SESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFS 128
             R ++ P+   L+   ++ S V   +   E     R   +LL IYL VGV+ +    D  S
Sbjct:    31 RCRSTPSTDPLQGPPEKGSSVKAKELFKEMRPSFRLVGLLLFIYLLVGVLAFYAVMDEIS 90

Query:   129 GVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVL 188
             G  T+ V+DALYFC+VTM T+GYGD+ P    TK+ AC FV +G   + + +S V +Y++
Sbjct:    91 GKRTNRVLDALYFCVVTMTTVGYGDLVPNNDTTKLLACAFVFMGMAVVALFVSKVADYLV 150

Query:   189 DLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRXXXXXXXXXXXXCIAIGALILFF 248
             + QE +    +    +K G +     ++      RI+             I  G + L+ 
Sbjct:   151 EKQEVLFFKALHTN-LKGGETKMLRAIETN----RIKYKFYTNALLLVLSIISGTVFLWK 205

Query:   249 LEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID 308
             +E L  +DSFY    ++TT+GYGD++F +  GR FA  W++ ST+++A+ F+YLAE   +
Sbjct:   206 VEKLSLVDSFYCVCATITTLGYGDKSFSSKLGRVFAVFWIITSTIIMAQFFMYLAEIYTE 265

Query:   309 KRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFN 368
             +R + +A WVL R++T  DL AAD++ +  +  +E+V++KLKE+GKI +++IS    +F 
Sbjct:   266 RRQKMLANWVLTRKMTKMDLEAADLDDDRQVGAAEFVVYKLKELGKINQEEISSFLEEFE 325

Query:   369 RLDPNNCGKITLPDL 383
             +LD ++ G ++  DL
Sbjct:   326 KLDVDHSGTLSPYDL 340

GO:0005242 "inward rectifier potassium channel activity" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0030007 "cellular potassium ion homeostasis" evidence=IC

GO:0031004 "potassium ion-transporting ATPase complex" evidence=IDA

UNIPROTKB|Q8LIN5 TPKB "Two pore potassium channel b" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 111/339 (32%), Positives = 181/339 (53%)

Query:    50 DQPQSQAPPESSTTWKPGSLHRSKTAPALVVL-RDVQQQTSQVPKPKSESSFIIRQAF-- 106
             D    + PPE +         R +TAP+      D    ++    PK+  +   R +F  
Sbjct:    12 DGGDQKPPPEGAAR----RFRRCRTAPSSEPPPTDKDNSSAADAPPKTLFTGGGRPSFRL 67

Query:   107 --VLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
               +LL  YL +G + +    DH SG  T   +DALYFC+VTM T+GYGD+ P + A K+ 
Sbjct:    68 VGLLLVAYLLLGTIAFYLAMDHMSGTRTTRALDALYFCVVTMTTVGYGDLVPASDAAKLL 127

Query:   165 ACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRI 224
             AC FV  G   +   LS   +Y+++ QE ++   +    +                  ++
Sbjct:   128 ACAFVFAGVAVVGTFLSKAADYLVEKQEALLFRALHSHTMVRAMEMN-----------KV 176

Query:   225 RXXXXXXXXXXXXCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFA 284
             R             +A G ++L+ +E +  +D+FY    +VTT+GYGDR+F +  GR FA
Sbjct:   177 RYKLYTAGLLLVAAVASGTVVLWKVEGMRAVDAFYCVCATVTTLGYGDRSFSSEGGRAFA 236

Query:   285 AIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNHNGFISKSEY 344
               W+  ST++VA  FLY AE   ++R R +A+WVL+R  T  DL AAD++ +  +  +++
Sbjct:   237 VAWITVSTVVVALFFLYAAELYTERRQRELARWVLRRRTTNMDLEAADLDGDHRVGAADF 296

Query:   345 VIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL 383
             V++KLKE+GKI ++DIS+  ++F+ LD ++ G ++  DL
Sbjct:   297 VLYKLKELGKISQEDISEFLDEFDNLDADHSGTLSPADL 335

GO:0005242 "inward rectifier potassium channel activity" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0030007 "cellular potassium ion homeostasis" evidence=IC

GO:0071805 "potassium ion transmembrane transport" evidence=IDA

UNIPROTKB|Q8E842 Q8E842 "Potassium/ion transporter, voltage-gated ion channel (VIC) superfamily" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 32/85 (37%), Positives = 48/85 (56%)

Query:   111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
             I LF+ V I   +T  +S VE    VDALYF ++TM TIGYGD+ P T  +K+F  +F  
Sbjct:    27 ILLFLLVTILIGSTLFYSSVEGWSKVDALYFSVMTMSTIGYGDLVPTTDMSKIFTIIFSF 86

Query:   171 VGFGFIDILLSGVVNYVLDLQENMI 195
             +  G    L + +V   L+ ++  +
Sbjct:    87 LSIGIFVSLNTKIVVMTLNQKKQKL 111

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_A0098 SO_A0098 "potassium/ion transporter, voltage-gated ion channel (VIC) superfamily" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 32/85 (37%), Positives = 48/85 (56%)

Query:   111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
             I LF+ V I   +T  +S VE    VDALYF ++TM TIGYGD+ P T  +K+F  +F  
Sbjct:    27 ILLFLLVTILIGSTLFYSSVEGWSKVDALYFSVMTMSTIGYGDLVPTTDMSKIFTIIFSF 86

Query:   171 VGFGFIDILLSGVVNYVLDLQENMI 195
             +  G    L + +V   L+ ++  +
Sbjct:    87 LSIGIFVSLNTKIVVMTLNQKKQKL 111

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9S6Z8	TPK5_ARATH	No assigned EC number	0.5941	0.9871	0.9387	yes	no
Q69TN4	KCO3_ORYSJ	No assigned EC number	0.5701	0.8221	0.6995	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_II001901 outward rectifying potassium channel (379 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
pfam07885	74	pfam07885, Ion_trans_2, Ion channel	2e-13
pfam07885	74	pfam07885, Ion_trans_2, Ion channel	1e-10
PRK10537	393	PRK10537, PRK10537, voltage-gated potassium channe	6e-06
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	0.002

>gnl|CDD|219619 pfam07885, Ion_trans_2, Ion channel

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 107 VLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFAC 166
           +LL + L  G V YS              +DALYF  VT+ TIGYGDI PLT A ++F  
Sbjct: 1   ILLLLVLIFGTVYYSLE----EEGWGWDFLDALYFSFVTLTTIGYGDIVPLTDAGRLFTI 56

Query: 167 LFVLVGFGFIDILLS 181
           +++L+G     + L+
Sbjct: 57  IYILIGIPLFLLFLA 71

This family includes the two membrane helix type ion channels found in bacteria. Length = 74

>gnl|CDD|219619 pfam07885, Ion_trans_2, Ion channel

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 234 VVVLCIAIGALILFFLE----DLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLL 289
           +++L + I   + + LE      D+LD+ Y S +++TT+GYGD    T  GR F  I++L
Sbjct: 1   ILLLLVLIFGTVYYSLEEEGWGWDFLDALYFSFVTLTTIGYGDIVPLTDAGRLFTIIYIL 60

Query: 290 FSTLMVARAFLYLA 303
               +       L 
Sbjct: 61  IGIPLFLLFLAVLG 74

This family includes the two membrane helix type ion channels found in bacteria. Length = 74

>gnl|CDD|236711 PRK10537, PRK10537, voltage-gated potassium channel; Provisional

 Score = 47.7 bits (114), Expect = 6e-06
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
           +   L  Y   G +      D FS      +  A YF IVTM T+GYGDI P++ + ++F
Sbjct: 143 SITSLLFYSTFGALYLG---DGFSPP-IESLSTAFYFSIVTMSTVGYGDIVPVSESARLF 198

Query: 165 A 165
            
Sbjct: 199 T 199

Length = 393

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 36.4 bits (85), Expect = 0.002
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 332 DMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLLE 385
           D + +G IS  E     LK +G  + E++I ++      +D +  GKI   + LE
Sbjct: 10  DKDGDGTISADELKAA-LKSLGEGLSEEEIDEM---IREVDKDGDGKIDFEEFLE 60

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
KOG4404	350	consensus Tandem pore domain K+ channel TASK3/THIK	99.96
KOG1418	433	consensus Tandem pore domain K+ channel [Inorganic	99.91
KOG3713	477	consensus Voltage-gated K+ channel KCNB/KCNC [Inor	99.69
PF07885	79	Ion_trans_2: Ion channel; InterPro: IPR013099 This	99.54
KOG1419	654	consensus Voltage-gated K+ channel KCNQ [Inorganic	99.53
KOG1545	507	consensus Voltage-gated shaker-like K+ channel KCN	99.51
PF07885	79	Ion_trans_2: Ion channel; InterPro: IPR013099 This	99.49
KOG3713	477	consensus Voltage-gated K+ channel KCNB/KCNC [Inor	99.34
PRK10537	393	voltage-gated potassium channel; Provisional	99.33
KOG4404	350	consensus Tandem pore domain K+ channel TASK3/THIK	99.29
KOG1419	654	consensus Voltage-gated K+ channel KCNQ [Inorganic	99.29
KOG4390	632	consensus Voltage-gated A-type K+ channel KCND [In	99.24
KOG1545	507	consensus Voltage-gated shaker-like K+ channel KCN	99.16
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.13
PRK10537	393	voltage-gated potassium channel; Provisional	99.08
KOG1420	1103	consensus Ca2+-activated K+ channel Slowpoke, alph	99.03
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.02
KOG1420	1103	consensus Ca2+-activated K+ channel Slowpoke, alph	98.99
KOG1418	433	consensus Tandem pore domain K+ channel [Inorganic	98.79
KOG4390	632	consensus Voltage-gated A-type K+ channel KCND [In	98.78
KOG3684	489	consensus Ca2+-activated K+ channel proteins (inte	98.66
KOG0498	727	consensus K+-channel ERG and related proteins, con	98.55
KOG0498	727	consensus K+-channel ERG and related proteins, con	98.35
KOG3193	1087	consensus K+ channel subunit [Inorganic ion transp	98.23
KOG3684	489	consensus Ca2+-activated K+ channel proteins (inte	98.21
PF01007	336	IRK: Inward rectifier potassium channel; InterPro:	97.99
KOG3193	1087	consensus K+ channel subunit [Inorganic ion transp	97.87
KOG0501	971	consensus K+-channel KCNQ [Inorganic ion transport	97.81
PF01007	336	IRK: Inward rectifier potassium channel; InterPro:	97.79
KOG0501	971	consensus K+-channel KCNQ [Inorganic ion transport	97.55
KOG0500	536	consensus Cyclic nucleotide-gated cation channel C	96.58
KOG3827	400	consensus Inward rectifier K+ channel [Inorganic i	96.58
KOG0500	536	consensus Cyclic nucleotide-gated cation channel C	96.51
TIGR00933	390	2a38 potassium uptake protein, TrkH family. The pr	96.08
PF00520	200	Ion_trans: Ion transport protein calcium channel s	95.79
KOG3827	400	consensus Inward rectifier K+ channel [Inorganic i	95.78
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	95.62
KOG0499	815	consensus Cyclic nucleotide-gated cation channel C	95.44
PF00520	200	Ion_trans: Ion transport protein calcium channel s	95.08
TIGR00933	390	2a38 potassium uptake protein, TrkH family. The pr	94.8
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	94.8
PRK10750	483	potassium transporter; Provisional	94.78
PF13202	25	EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ	94.64
PRK10750	483	potassium transporter; Provisional	94.02
PF00036	29	EF-hand_1: EF hand; InterPro: IPR018248 Many calci	93.93
PRK05482	559	potassium-transporting ATPase subunit A; Provision	93.75
KOG0499	815	consensus Cyclic nucleotide-gated cation channel C	93.64
PF00060	148	Lig_chan: Ligand-gated ion channel; InterPro: IPR0	93.08
PF13405	31	EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J	92.11
PF00060	148	Lig_chan: Ligand-gated ion channel; InterPro: IPR0	92.05
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	91.57
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	91.31
cd00052	67	EH Eps15 homology domain; found in proteins implic	90.44
COG0168	499	TrkG Trk-type K+ transport systems, membrane compo	90.28
PF02386	354	TrkH: Cation transport protein; InterPro: IPR00344	90.26
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	89.05
PTZ00183	158	centrin; Provisional	87.98
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	87.75
TIGR00934	800	2a38euk potassium uptake protein, Trk family. The	86.01
KOG0038	189	consensus Ca2+-binding kinase interacting protein	85.71
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	85.48
KOG4440	993	consensus NMDA selective glutamate-gated ion chann	85.19
cd00051	63	EFh EF-hand, calcium binding motif; A diverse supe	84.95
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	84.88
PLN02964	644	phosphatidylserine decarboxylase	84.84
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	84.8
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	83.92
PTZ00183	158	centrin; Provisional	83.83
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	83.73
TIGR00934	800	2a38euk potassium uptake protein, Trk family. The	83.25
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	83.07
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	82.83
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	82.69
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	82.68
PTZ00184	149	calmodulin; Provisional	82.25
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	82.25
KOG1054	897	consensus Glutamate-gated AMPA-type ion channel re	81.96
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	81.87
PTZ00184	149	calmodulin; Provisional	81.7
KOG4440	993	consensus NMDA selective glutamate-gated ion chann	81.15
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	80.01

>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]

Probab=99.96  E-value=4.9e-28  Score=226.35  Aligned_cols=191  Identities=21%  Similarity=0.350  Sum_probs=149.0

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccc---------------------------------------ccCCCCCCCcchhhhhe
Q 016527          102 IRQAFVLLSIYLFVGVVIYSFNTD---------------------------------------HFSGVETHPVVDALYFC  142 (388)
Q Consensus       102 ~~~~~i~~~~~i~~g~~i~~~~~~---------------------------------------~~~~~~~~s~~~a~yf~  142 (388)
                      ...+++..+.|+++|+++|-..+.                                       .......|.|..|+||+
T Consensus         9 ~l~Livct~tYLLvGAaVFdaLEse~E~~~r~~l~~~~~~~~~kyn~s~~d~r~~er~i~~s~ph~ag~qWkF~GaFYFa   88 (350)
T KOG4404|consen    9 TLLLIVCTFTYLLVGAAVFDALESENEARERERLERRLANLKRKYNLSEEDYRELERVILKSEPHKAGPQWKFAGAFYFA   88 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCccccccccccCcceEEE
Confidence            344666778899999999976430                                       11113459999999999


Q ss_pred             eeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCcccccceeeecccch
Q 016527          143 IVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRM  222 (388)
Q Consensus       143 ~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~  222 (388)
                      .+.+||||||.-.|.|..||+||++|.++|+++..+.+..++..+.... ..+++..|.+...+.++..           
T Consensus        89 ~TVItTIGyGhstP~T~~GK~Fcm~Yal~Gipl~lvmFqs~gERlnt~~-ayil~~~r~~~~~r~~~~S-----------  156 (350)
T KOG4404|consen   89 TTVITTIGYGHSTPSTDGGKAFCMFYALVGIPLTLVMFQSIGERLNTFV-AYILRRCRRRLGRRRWDVS-----------  156 (350)
T ss_pred             EEEEeeeccCCCCCCCcCceehhhhHHHhcCchHHHHHHHHHHHHHHHH-HHHHHHHHHHhccccCCCc-----------
Confidence            9999999999999999999999999999999999999999988776543 4455555554443322111           


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCC--------cCcchhhHHHHHHHHHH
Q 016527          223 RIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKT--------LPGRFFAAIWLLFSTLM  294 (388)
Q Consensus       223 ~~~~~~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t--------~~gr~~~~~~~l~G~~~  294 (388)
                       .-.-+.......++.++.|+.+|...|+|+|+||+||++||+|||||||+++..        +..+.+..++|++|+.+
T Consensus       157 -~~~l~~i~~~~~~~~i~~gaa~fs~~E~Wsyfds~YyCFITltTIGFGDyValQ~~~alq~qplYv~~sf~fIL~Gl~v  235 (350)
T KOG4404|consen  157 -VYNLVLILFTACILLICCGAAMFSSVEGWSYFDSYYYCFITLTTIGFGDYVALQQDAALQSQPLYVFFSFVFILLGLCV  235 (350)
T ss_pred             -HHHHHHHHHHHHHHHHHhhHHHhhcccCcchhhhhheeeeeeeeccccchhhhcchhhhhCCCceehHhHHHHHHHHHH
Confidence             111233444566677889999999999999999999999999999999999853        35678999999999999


Q ss_pred             HHHHHHHHHHH
Q 016527          295 VARAFLYLAEA  305 (388)
Q Consensus       295 ~~~~~~~l~~~  305 (388)
                      ++.+++.+.=.
T Consensus       236 i~a~~NllvLr  246 (350)
T KOG4404|consen  236 IYALLNLLVLR  246 (350)
T ss_pred             HHHHHHHHHHH
Confidence            99888877633

>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]

Probab=99.91  E-value=1.7e-25  Score=224.54  Aligned_cols=175  Identities=28%  Similarity=0.510  Sum_probs=134.2

Q ss_pred             cccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-Hhhccc
Q 016527          125 DHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILT-GIQMGK  203 (388)
Q Consensus       125 ~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~  203 (388)
                      ......+.|+|.+|+|||++++||||||+++|.|..||++|++|+++|+|++.++++.+++++.........+ ..+..+
T Consensus       106 ~~~~~~~~W~f~~al~fs~tv~TTIGYG~i~P~T~~Gr~~~i~YaliGIPl~li~l~~~g~~l~~~~~~~~~~~~~~~~~  185 (433)
T KOG1418|consen  106 DESPDTQQWSFSSALLFSITVITTIGYGNIAPRTDAGRLFTILYALVGIPLMLLILADIGKFLADSLRKLYRRRHVELQR  185 (433)
T ss_pred             ccCCCCcceecchhHhhhhheeeeccCCcccCCcCcchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            3334567799999999999999999999999999999999999999999999999999999998876554421 000000


Q ss_pred             cccCcccc----cceeeecccchhh---hHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccC
Q 016527          204 VKEGFSAR----DYIVDVAKGRMRI---RLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFK  276 (388)
Q Consensus       204 ~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~  276 (388)
                      ........    ....+.+......   +.++..++.++++++..|+.++...|+|+|++|+||+++|+|||||||++|.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~w~f~~~~Yf~fisltTIG~GD~vp~  265 (433)
T KOG1418|consen  186 DRIRSNLRRSIGLRNRSVELGIELLDELRFILLLLLGISLVYLSPGSLLFSLQEQWSFIEAFYFSFISLTTIGFGDIVPR  265 (433)
T ss_pred             hhhhhhhhccccchhcccccchhhccCcceehhhhheeeEEEecccceeeeceeceeeEeeeeEEEEEeeeecCCccccC
Confidence            00000000    0000111111112   4566677777888889999999999999999999999999999999999999


Q ss_pred             CcCcc--------hhhHHHHHHHHHHHHHHH
Q 016527          277 TLPGR--------FFAAIWLLFSTLMVARAF  299 (388)
Q Consensus       277 t~~gr--------~~~~~~~l~G~~~~~~~~  299 (388)
                      +..++        .+..+++++|...++...
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  296 (433)
T KOG1418|consen  266 TLLGRFRREELVDPLASVWILSGLALLALVL  296 (433)
T ss_pred             CCcceeeccccccchhHHHHHhhhhHHHHHh
Confidence            98877        689999999998888776

>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]

Probab=99.69  E-value=2.2e-16  Score=156.48  Aligned_cols=206  Identities=22%  Similarity=0.268  Sum_probs=126.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhhccc-------cc----------CCCCCCCcchhhhheeeeeecccccccccCCcc
Q 016527           98 SSFIIRQAFVLLSIYLFVGVVIYSFNTD-------HF----------SGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA  160 (388)
Q Consensus        98 ~~~~~~~~~i~~~~~i~~g~~i~~~~~~-------~~----------~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~  160 (388)
                      +....+.+.++.+++++++++.+++...       ..          ...+..+.+.-+...++.++|+.|.=-.-.+|.
T Consensus       187 SS~~Ak~fa~~Sv~FVlvSiv~lcL~T~pe~q~~~~~~~~~~~~~~~~~~~~~p~l~~vE~vCi~WFT~E~llR~~~~P~  266 (477)
T KOG3713|consen  187 SSLAAKVFAVLSVLFVLVSIVGLCLGTLPEFQVPDKQGEGLLVNVEKIESEPHPILTYVETVCIAWFTFEYLLRFLVAPN  266 (477)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHcCCHhhhchhhccccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHcCch
Confidence            3466677777788888888888887652       10          123345667777777888889998733222221


Q ss_pred             c-----chhhhhhhhhhhHH-HHHHHHHHH-----------HHHHHHHHHHHHHHhhccccccCcccccceeeecccchh
Q 016527          161 T-----KVFACLFVLVGFGF-IDILLSGVV-----------NYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMR  223 (388)
Q Consensus       161 g-----r~~~~~~~l~Gi~~-~~~~~~~~~-----------~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (388)
                      -     +...++-.+.-+|+ +.+++..++           ..+--.+..|++|.+|..|++.+++....      ...+
T Consensus       267 k~~F~k~pLNIIDllAIlPFYielll~~~~~~~~~~l~~~~~vvrvlR~lRI~RI~KLaRhS~GLr~lg~------Tlr~  340 (477)
T KOG3713|consen  267 KLEFFKSPLNIIDLLAILPFYLELLLTLFGGESLKELENAGLVVRVLRVLRILRIFKLARHSTGLRTLGL------TLRR  340 (477)
T ss_pred             HHHHHhCcchHHHHHHHHHHHHHHHHHHhccchHHHHhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHH------HHHH
Confidence            1     22233333222221 111222111           11111234466677777777755433211      0011


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHH
Q 016527          224 IRLKVGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVA  296 (388)
Q Consensus       224 ~~~~~~~~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~  296 (388)
                      --+.+.++++.+.+-+++.+.+.|+.|+       .|++-++||+++|||||||||++|.|..||+++...++.|++++|
T Consensus       341 S~~ElglLllfL~~GI~iFStlvY~~Ek~~~~~~FtSIPa~~WWaiVTMTTVGYGDm~P~T~~Gklvas~cil~GVLvlA  420 (477)
T KOG3713|consen  341 SYRELGLLLLFLAVGIVIFSTLVYFAEKDEPDTKFTSIPAGFWWAVVTMTTVGYGDMVPVTVLGKLVASLCILCGVLVLA  420 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccchhheeeEEEeeecccCccccccchHHHHHHHHHHhHHHhh
Confidence            1223444444444445555666666664       378999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 016527          297 RAFLYLAEARIDK  309 (388)
Q Consensus       297 ~~~~~l~~~~~~~  309 (388)
                      +.+..|.+-+...
T Consensus       421 lPItiIv~nF~~~  433 (477)
T KOG3713|consen  421 LPITIIVNNFSMY  433 (477)
T ss_pred             cchHhHhhhHHHH
Confidence            9888877766553

>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []

Probab=99.54  E-value=3.1e-15  Score=116.18  Aligned_cols=73  Identities=33%  Similarity=0.636  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHH---hhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          235 VVLCIAIGALILFF---LEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARI  307 (388)
Q Consensus       235 ~~~~i~~g~~~~~~---~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~  307 (388)
                      ++.++..++..++.   .|+|++.||+||+++|+|||||||+.|.++.||+++++++++|+.+++..++.+++.+.
T Consensus         3 ~~~~l~~~~~~~~~~~~~~~~~~~da~yfs~~t~tTvGyGDi~p~t~~gr~~~~~~~~~G~~~~~~~~~~~~~~l~   78 (79)
T PF07885_consen    3 LLLVLAFGAIFFYISEGSEKWSFIDALYFSFVTITTVGYGDIVPQTPAGRIFTIIYMLIGIFLFALFLSVLASVLT   78 (79)
T ss_dssp             HHHHHHHHHHHHHHTTSSSTTSHHHHHHHHHHHHTT---SSSSTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeeeHHHHHHHHHHHhcccCCHHHHHHHHHHHHhcccCCCccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34455566666666   46799999999999999999999999999999999999999999999999999987653

; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....

>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]

Probab=99.53  E-value=3.7e-15  Score=148.36  Aligned_cols=113  Identities=20%  Similarity=0.290  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHhhccccccCcccccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC-----------Ccccc
Q 016527          189 DLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDL-----------DWLDS  257 (388)
Q Consensus       189 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e~~-----------s~~da  257 (388)
                      ..+...++|.+++.+....|+....++-.      -+..+...+.+-++.+++.+.+.|+.|.-           +|.||
T Consensus       200 slRFlQILRmlr~DRrggTWKLLGSvV~a------H~~ELiTt~YIGFL~LIfsSflVYLaEKd~~~e~~n~~F~TyADA  273 (654)
T KOG1419|consen  200 SLRFLQILRMLRMDRRGGTWKLLGSVVYA------HSKELITTWYIGFLVLIFSSFLVYLAEKDAQGEGTNDEFPTYADA  273 (654)
T ss_pred             hhHHHHHHHHHHhhccCchhhhhhhhhhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhHHHH
Confidence            34555677777777766555543322211      13456667777788888889999998852           89999


Q ss_pred             eeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          258 FYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARI  307 (388)
Q Consensus       258 ~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~  307 (388)
                      +||++||+|||||||.+|+|+.||+++..+.++|+.+|+...+.+.+-+.
T Consensus       274 LWWG~ITltTIGYGDk~P~TWlGr~laa~fsligiSFFALPAGILGSGfA  323 (654)
T KOG1419|consen  274 LWWGVITLTTIGYGDKTPQTWLGRLLAACFSLIGISFFALPAGILGSGFA  323 (654)
T ss_pred             HHhhheeEEeeccCCcCcccchhHHHHHHHHHHHHHHHhcccccccchhh
Confidence            99999999999999999999999999999999999999998888876543

>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]

Probab=99.51  E-value=6.9e-15  Score=139.81  Aligned_cols=54  Identities=26%  Similarity=0.429  Sum_probs=49.7

Q ss_pred             CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 016527          252 LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEA  305 (388)
Q Consensus       252 ~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~  305 (388)
                      -|+.|||||+++|||||||||++|.|..||+++.++.+.|++.+|..+..+.+-
T Consensus       392 ~SIPdaFWwavVTMTTVGYGDm~P~TvgGKIVGslCAiaGVLTiALPVPVIVsN  445 (507)
T KOG1545|consen  392 SSIPDAFWWAVVTMTTVGYGDMVPVTVGGKIVGSLCAIAGVLTIALPVPVIVSN  445 (507)
T ss_pred             CcCcccceEEEEEEEeeccccceecccCceehhhHHhhhhheEecccccEEEec
Confidence            389999999999999999999999999999999999999999999887766653

>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []

Probab=99.49  E-value=2.5e-14  Score=111.04  Aligned_cols=77  Identities=35%  Similarity=0.727  Sum_probs=63.0

Q ss_pred             HHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 016527          108 LLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYV  187 (388)
Q Consensus       108 ~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~  187 (388)
                      +++++++.|++.+...    .+.+.|++.||+||+++|+|||||||+.|.++.||++++++++.|++++++.++.+.+.+
T Consensus         2 ~~~~~l~~~~~~~~~~----~~~~~~~~~da~yfs~~t~tTvGyGDi~p~t~~gr~~~~~~~~~G~~~~~~~~~~~~~~l   77 (79)
T PF07885_consen    2 ILLLVLAFGAIFFYIS----EGSEKWSFIDALYFSFVTITTVGYGDIVPQTPAGRIFTIIYMLIGIFLFALFLSVLASVL   77 (79)
T ss_dssp             HHHHHHHHHHHHHHHT----TSSSTTSHHHHHHHHHHHHTT---SSSSTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeeHHHHHHHHHH----HhcccCCHHHHHHHHHHHHhcccCCCccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4555667777777662    124689999999999999999999999999999999999999999999999999888776


Q ss_pred             H
Q 016527          188 L  188 (388)
Q Consensus       188 ~  188 (388)
                      .
T Consensus        78 ~   78 (79)
T PF07885_consen   78 T   78 (79)
T ss_dssp             H
T ss_pred             c
Confidence            4

; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....

>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]

Probab=99.34  E-value=2.8e-12  Score=127.51  Aligned_cols=96  Identities=21%  Similarity=0.341  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHH
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDI  178 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~  178 (388)
                      +.+..+++++.+...++++++|+.+.+. ++....|...++|||++|||||||||++|+|..||+++..-++.|+.++++
T Consensus       343 ~ElglLllfL~~GI~iFStlvY~~Ek~~-~~~~FtSIPa~~WWaiVTMTTVGYGDm~P~T~~Gklvas~cil~GVLvlAl  421 (477)
T KOG3713|consen  343 RELGLLLLFLAVGIVIFSTLVYFAEKDE-PDTKFTSIPAGFWWAVVTMTTVGYGDMVPVTVLGKLVASLCILCGVLVLAL  421 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCCccccchhheeeEEEeeecccCccccccchHHHHHHHHHHhHHHhhc
Confidence            4555566666666777788888887765 334477889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 016527          179 LLSGVVNYVLDLQENMI  195 (388)
Q Consensus       179 ~~~~~~~~~~~~~~~~~  195 (388)
                      .++.+.+-+.+.+.+..
T Consensus       422 PItiIv~nF~~~y~~~k  438 (477)
T KOG3713|consen  422 PITIIVNNFSMYYSELK  438 (477)
T ss_pred             chHhHhhhHHHHHHHHH
Confidence            99988887777655443

>PRK10537 voltage-gated potassium channel; Provisional

Probab=99.33  E-value=1.3e-11  Score=123.37  Aligned_cols=82  Identities=20%  Similarity=0.313  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 016527          231 ALGVVVLCIAIGALILFFLED------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAE  304 (388)
Q Consensus       231 ~~~~~~~~i~~g~~~~~~~e~------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~  304 (388)
                      .+..+..+++.+.+.++..|+      +++.||+||+++|+|||||||+.|.|..||++++++++.|++++++.++.+..
T Consensus       140 ~~~~~~~l~~~~~~g~~~~~~~f~~~~~s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~  219 (393)
T PRK10537        140 AVISITSLLFYSTFGALYLGDGFSPPIESLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFG  219 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHccccCcCCCCHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444455666665665553      69999999999999999999999999999999999999999999998888776


Q ss_pred             HHHHHHHH
Q 016527          305 ARIDKRHR  312 (388)
Q Consensus       305 ~~~~~~~~  312 (388)
                      ..++.+.+
T Consensus       220 p~i~~~l~  227 (393)
T PRK10537        220 PVIRGNLK  227 (393)
T ss_pred             HHHHHHHH
Confidence            66654443

>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]

Probab=99.29  E-value=7.9e-12  Score=117.95  Aligned_cols=92  Identities=26%  Similarity=0.468  Sum_probs=77.8

Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccC--------Cccc
Q 016527           90 QVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPL--------TPAT  161 (388)
Q Consensus        90 ~~~~~~~~~~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~--------t~~g  161 (388)
                      -.++|......++.+...+.++.+++|+.+|.-       -|+|+|+||+|||++|+|||||||.++.        .+..
T Consensus       149 ~~r~~~~S~~~l~~i~~~~~~~~i~~gaa~fs~-------~E~Wsyfds~YyCFITltTIGFGDyValQ~~~alq~qplY  221 (350)
T KOG4404|consen  149 GRRRWDVSVYNLVLILFTACILLICCGAAMFSS-------VEGWSYFDSYYYCFITLTTIGFGDYVALQQDAALQSQPLY  221 (350)
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHHhhHHHhhc-------ccCcchhhhhheeeeeeeeccccchhhhcchhhhhCCCce
Confidence            445677666777887888888889999999965       5899999999999999999999999985        3577


Q ss_pred             chhhhhhhhhhhHHHHHHHHHHHHHHH
Q 016527          162 KVFACLFVLVGFGFIDILLSGVVNYVL  188 (388)
Q Consensus       162 r~~~~~~~l~Gi~~~~~~~~~~~~~~~  188 (388)
                      +.++++|+++|+.++..+++.+.-.+.
T Consensus       222 v~~sf~fIL~Gl~vi~a~~NllvLrf~  248 (350)
T KOG4404|consen  222 VFFSFVFILLGLCVIYALLNLLVLRFM  248 (350)
T ss_pred             ehHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999998887765544

>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]

Probab=99.29  E-value=3.8e-12  Score=127.10  Aligned_cols=109  Identities=24%  Similarity=0.365  Sum_probs=89.1

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhhhhcccc---cCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhh
Q 016527           95 KSESSFIIRQAFVLLSIYLFVGVVIYSFNTDH---FSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLV  171 (388)
Q Consensus        95 ~~~~~~~~~~~~i~~~~~i~~g~~i~~~~~~~---~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~  171 (388)
                      ..+++.++..+.|-+++.++.+.++|..+.+.   ..+.+..+|.||+||.++|+|||||||.+|+|..||+++..|.++
T Consensus       227 ~aH~~ELiTt~YIGFL~LIfsSflVYLaEKd~~~e~~n~~F~TyADALWWG~ITltTIGYGDk~P~TWlGr~laa~fsli  306 (654)
T KOG1419|consen  227 YAHSKELITTWYIGFLVLIFSSFLVYLAEKDAQGEGTNDEFPTYADALWWGVITLTTIGYGDKTPQTWLGRLLAACFSLI  306 (654)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhheeEEeeccCCcCcccchhHHHHHHHHHH
Confidence            34557899999999999999999999988752   223456789999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHH-HHHHHHHHHHHhhccc
Q 016527          172 GFGFIDILLSGVVNYV-LDLQENMILTGIQMGK  203 (388)
Q Consensus       172 Gi~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~  203 (388)
                      |+.++++..+.+++-+ ++.|++...+++.+++
T Consensus       307 giSFFALPAGILGSGfALKVQeq~RQKHf~rrr  339 (654)
T KOG1419|consen  307 GISFFALPAGILGSGFALKVQEQHRQKHFNRRR  339 (654)
T ss_pred             HHHHHhcccccccchhhhhhHHHHHHHHHHhhc
Confidence            9999999988888744 4555555455444443

>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]

Probab=99.24  E-value=1.7e-13  Score=131.41  Aligned_cols=163  Identities=18%  Similarity=0.304  Sum_probs=96.2

Q ss_pred             cchhhh---heeeeeecccccc-cccCCcccchhhhhhhhhhhH-HHHHHHHHHHH-------HHHHHHHHHHHHHhhcc
Q 016527          135 VVDALY---FCIVTMCTIGYGD-IAPLTPATKVFACLFVLVGFG-FIDILLSGVVN-------YVLDLQENMILTGIQMG  202 (388)
Q Consensus       135 ~~~a~y---f~~vtltTVGYGd-i~p~t~~gr~~~~~~~l~Gi~-~~~~~~~~~~~-------~~~~~~~~~~~r~~~~~  202 (388)
                      |..+++   -+++.++|+.|-- ........|++-.+..++.+. ++.+.++.+..       .++..+.-+++|.+|.+
T Consensus       225 y~~aFFclDTACVmIFT~EYlLRL~aAPsR~rF~RSvMSiIDVvAIlPYYigLv~t~N~DVSGaFVTLRVFRVFRIFKFS  304 (632)
T KOG4390|consen  225 YPVAFFCLDTACVMIFTGEYLLRLFAAPSRYRFLRSVMSIIDVVAILPYYIGLVMTDNEDVSGAFVTLRVFRVFRIFKFS  304 (632)
T ss_pred             cceeeEEecceeEEEeeHHHHHHHHcCchHHHHHHHHHHHHHHhhhhhhheEEEecCCccccceeEEEEeeeeeeeeeec
Confidence            555554   3567788888852 222233445555555554433 33333332211       11122233567777777


Q ss_pred             ccccCcccccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-c------CCcccceeeeEeeeeccccCCCcc
Q 016527          203 KVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLE-D------LDWLDSFYLSVMSVTTVGYGDRAF  275 (388)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e-~------~s~~da~y~~~iT~tTVGyGDi~p  275 (388)
                      |++.+++-..|-...      -.-.+.++++.+...|++.+.+++..| +      -++..||||+++||||.||||++|
T Consensus       305 RHSQGLRILGYTLKS------CASELGFLlFSLtMAIIIFATvMfYAEKg~~at~FTsIPaaFWYTIVTmTTLGYGDMVp  378 (632)
T KOG4390|consen  305 RHSQGLRILGYTLKS------CASELGFLLFSLTMAIIIFATVMFYAEKGSSATKFTSIPAAFWYTIVTMTTLGYGDMVP  378 (632)
T ss_pred             ccccccchhhhhHHH------HHHHHhHHHHHHHHHHHHHHHHHHhhhccccccccccCcHhHhhheeeeeeccccccch
Confidence            777655443331110      011233333333333444444455555 3      378899999999999999999999


Q ss_pred             CCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 016527          276 KTLPGRFFAAIWLLFSTLMVARAFLYLA  303 (388)
Q Consensus       276 ~t~~gr~~~~~~~l~G~~~~~~~~~~l~  303 (388)
                      .|..|++|+.+..+.|+++++..+..+.
T Consensus       379 ~TIaGKIfGsiCSLSGVLVIALPVPvIV  406 (632)
T KOG4390|consen  379 STIAGKIFGSICSLSGVLVIALPVPVIV  406 (632)
T ss_pred             HHHHHHHhhhhhcccceEEEeccccEEE
Confidence            9999999999999999998887665443

>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]

Probab=99.16  E-value=2e-12  Score=123.16  Aligned_cols=86  Identities=24%  Similarity=0.418  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHH
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDI  178 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~  178 (388)
                      +.+..+++++++..++.+..+|..+.+. ++....+..||+||+++|||||||||++|.|+.||++..+.++.|+..+++
T Consensus       359 rElgLLIFFlfIgviLFsSavYFAEade-~~S~F~SIPdaFWwavVTMTTVGYGDm~P~TvgGKIVGslCAiaGVLTiAL  437 (507)
T KOG1545|consen  359 RELGLLIFFLFIGVILFSSAVYFAEADE-PESHFSSIPDAFWWAVVTMTTVGYGDMVPVTVGGKIVGSLCAIAGVLTIAL  437 (507)
T ss_pred             HHHHHHHHHHHHHHHHHhceeeeeecCC-CccCCCcCcccceEEEEEEEeeccccceecccCceehhhHHhhhhheEecc
Confidence            5667777777777777888888776543 456667899999999999999999999999999999999999999988887


Q ss_pred             HHHHHHH
Q 016527          179 LLSGVVN  185 (388)
Q Consensus       179 ~~~~~~~  185 (388)
                      .+..+++
T Consensus       438 PVPVIVs  444 (507)
T KOG1545|consen  438 PVPVIVS  444 (507)
T ss_pred             cccEEEe
Confidence            6655543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.13  E-value=3.5e-10  Score=123.87  Aligned_cols=54  Identities=24%  Similarity=0.410  Sum_probs=50.4

Q ss_pred             ccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          255 LDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       255 ~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      ..|+||+++|||||||||++|.|..++++++++|++|++++++.++.+++.+.+
T Consensus       252 i~slYwai~TmtTVGYGDi~p~t~~E~i~~i~~ml~g~~~~a~~ig~i~~li~~  305 (823)
T PLN03192        252 ISAIYWSITTMTTVGYGDLHAVNTIEMIFIIFYMLFNLGLTAYLIGNMTNLVVE  305 (823)
T ss_pred             HHHHHHHHHHHhhccCCCcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            337999999999999999999999999999999999999999999999987654

>PRK10537 voltage-gated potassium channel; Provisional

Probab=99.08  E-value=3.2e-10  Score=113.47  Aligned_cols=89  Identities=26%  Similarity=0.472  Sum_probs=68.6

Q ss_pred             HHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 016527          108 LLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYV  187 (388)
Q Consensus       108 ~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~  187 (388)
                      .+...++.|++.+++.++.+. +..+++.+|+||+++|+||+||||+.|.|..||+|++.+++.|++++++.++.+...+
T Consensus       143 ~~~~l~~~~~~g~~~~~~~f~-~~~~s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~p~  221 (393)
T PRK10537        143 SITSLLFYSTFGALYLGDGFS-PPIESLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPV  221 (393)
T ss_pred             HHHHHHHHHHHHHHHHccccC-cCCCCHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334445556665444343332 4568999999999999999999999999999999999999999999999888888776


Q ss_pred             HHHHHHHHHH
Q 016527          188 LDLQENMILT  197 (388)
Q Consensus       188 ~~~~~~~~~r  197 (388)
                      ++.+.++.++
T Consensus       222 i~~~l~~~~~  231 (393)
T PRK10537        222 IRGNLKRLVK  231 (393)
T ss_pred             HHHHHHHHHH
Confidence            6655444443

>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.03  E-value=1.6e-10  Score=115.90  Aligned_cols=81  Identities=25%  Similarity=0.404  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc-------------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHH
Q 016527          226 LKVGLALGVVVLCIAIGALILFFLED-------------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFST  292 (388)
Q Consensus       226 ~~~~~~~~~~~~~i~~g~~~~~~~e~-------------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~  292 (388)
                      .++..++.+++..++.++.++++.|+             .+|+++.||-++||+||||||+.-.|..||.|.+++++.|+
T Consensus       248 irl~qlvsifisvwltaag~ihllensgdp~~~f~n~hrltyw~cvyfl~vtmstvgygdvyc~t~lgrlfmvffil~gl  327 (1103)
T KOG1420|consen  248 IRLVQLVSIFISVWLTAAGFIHLLENSGDPWENFQNNHRLTYWECVYFLMVTMSTVGYGDVYCKTTLGRLFMVFFILGGL  327 (1103)
T ss_pred             hhHHHHHHHHHHHHHhhcceeehhhcCCChhHhccCcccchhhheeeeeEEEeeeccccceeehhhhhHHHHHHHHHHHH
Confidence            34556677888888999999999885             38999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 016527          293 LMVARAFLYLAEAR  306 (388)
Q Consensus       293 ~~~~~~~~~l~~~~  306 (388)
                      ++++..+..+.+.+
T Consensus       328 amfasyvpeiieli  341 (1103)
T KOG1420|consen  328 AMFASYVPEIIELI  341 (1103)
T ss_pred             HHHHhhhHHHHHHH
Confidence            99999888888764

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.02  E-value=4.1e-10  Score=123.35  Aligned_cols=91  Identities=24%  Similarity=0.411  Sum_probs=70.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCC---------------CcchhhhheeeeeecccccccccCCcccchh
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETH---------------PVVDALYFCIVTMCTIGYGDIAPLTPATKVF  164 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~---------------s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~  164 (388)
                      ++++.+.+++++..++|++.|............|               .|..|+||+++|+|||||||++|.|..++++
T Consensus       201 ~~~kli~~~l~~~H~~aC~~y~i~~~~~~~~~~Wi~~~~~~~~~~s~~~~Yi~slYwai~TmtTVGYGDi~p~t~~E~i~  280 (823)
T PLN03192        201 RCARLLSVTLFLVHCAGCLYYLIADRYPHQGKTWIGAVIPNFRETSLWIRYISAIYWSITTMTTVGYGDLHAVNTIEMIF  280 (823)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHhhhccccCcHHHHHHHHHHHHHHHHhhccCCCcCCCccchHHH
Confidence            4455566666677777888777643111111112               1556899999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHH
Q 016527          165 ACLFVLVGFGFIDILLSGVVNYVLDL  190 (388)
Q Consensus       165 ~~~~~l~Gi~~~~~~~~~~~~~~~~~  190 (388)
                      +++++++|++++++.++.+.+.+.+.
T Consensus       281 ~i~~ml~g~~~~a~~ig~i~~li~~~  306 (823)
T PLN03192        281 IIFYMLFNLGLTAYLIGNMTNLVVEG  306 (823)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987654

>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.99  E-value=6.7e-11  Score=118.50  Aligned_cols=139  Identities=19%  Similarity=0.332  Sum_probs=102.7

Q ss_pred             hhhccCCCCCCCCCCCCCCCCCccccccCcchhhhccccccccCCCCCCCcch-HHHHHHHHHHHHHHHHHHhhhhhhcc
Q 016527           46 IENLDQPQSQAPPESSTTWKPGSLHRSKTAPALVVLRDVQQQTSQVPKPKSES-SFIIRQAFVLLSIYLFVGVVIYSFNT  124 (388)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~r~~R~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~i~~g~~i~~~~~  124 (388)
                      ++-.++|+++....-.+.|-.-|+.|.-+.  +.+..-.+    -++-.+..+ .++..++.+.+.+|+..+.++..++.
T Consensus       200 vdfftippsfvsiyl~r~wlglrflralrl--mtvpdilq----ylnilktsssirl~qlvsifisvwltaag~ihllen  273 (1103)
T KOG1420|consen  200 VDFFTIPPSFVSIYLNRSWLGLRFLRALRL--MTVPDILQ----YLNILKTSSSIRLVQLVSIFISVWLTAAGFIHLLEN  273 (1103)
T ss_pred             eeeeecCchheEEEeccchHHHHHHHHHHh--ccHHHHHH----HHHHHhccchhhHHHHHHHHHHHHHhhcceeehhhc
Confidence            444578999999888888887777654432  11111111    111111112 47778888888888888888888875


Q ss_pred             c-----ccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 016527          125 D-----HFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDL  190 (388)
Q Consensus       125 ~-----~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~  190 (388)
                      .     ++.+....+|++++||..+||+||||||++..|..||.|.++|++.|+++++..+..+...+-.+
T Consensus       274 sgdp~~~f~n~hrltyw~cvyfl~vtmstvgygdvyc~t~lgrlfmvffil~glamfasyvpeiielignr  344 (1103)
T KOG1420|consen  274 SGDPWENFQNNHRLTYWECVYFLMVTMSTVGYGDVYCKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNR  344 (1103)
T ss_pred             CCChhHhccCcccchhhheeeeeEEEeeeccccceeehhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHccc
Confidence            2     34455567899999999999999999999999999999999999999999999888888777543

>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]

Probab=98.79  E-value=5.1e-09  Score=105.10  Aligned_cols=57  Identities=23%  Similarity=0.423  Sum_probs=53.9

Q ss_pred             CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          252 LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       252 ~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      |+|.+|+||+++++||||||+++|.|..||+++++|.++|+.++..+++.+.+...+
T Consensus       114 W~f~~al~fs~tv~TTIGYG~i~P~T~~Gr~~~i~YaliGIPl~li~l~~~g~~l~~  170 (433)
T KOG1418|consen  114 WSFSSALLFSITVITTIGYGNIAPRTDAGRLFTILYALVGIPLMLLILADIGKFLAD  170 (433)
T ss_pred             eecchhHhhhhheeeeccCCcccCCcCcchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998888876654

>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]

Probab=98.78  E-value=1.3e-09  Score=105.15  Aligned_cols=88  Identities=27%  Similarity=0.410  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHH
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDI  178 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~  178 (388)
                      ..+..+++-+.+..++++.++|+.+.+. +.....+...|+||+++||||.||||++|.|.+||+|..+..+.|+.++++
T Consensus       322 SELGFLlFSLtMAIIIFATvMfYAEKg~-~at~FTsIPaaFWYTIVTmTTLGYGDMVp~TIaGKIfGsiCSLSGVLVIAL  400 (632)
T KOG4390|consen  322 SELGFLLFSLTMAIIIFATVMFYAEKGS-SATKFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIAL  400 (632)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHhhhccc-cccccccCcHhHhhheeeeeeccccccchHHHHHHHhhhhhcccceEEEec
Confidence            4566666656666677788888876543 345567788999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHH
Q 016527          179 LLSGVVNYV  187 (388)
Q Consensus       179 ~~~~~~~~~  187 (388)
                      .+..+++-+
T Consensus       401 PVPvIVSNF  409 (632)
T KOG4390|consen  401 PVPVIVSNF  409 (632)
T ss_pred             cccEEEech
Confidence            666555433

>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]

Probab=98.66  E-value=9.1e-08  Score=94.52  Aligned_cols=99  Identities=17%  Similarity=0.238  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc--------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHH
Q 016527          228 VGLALGVVVLCIAIGALILFFLED--------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAF  299 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~~e~--------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~  299 (388)
                      ...++.+.+.+|++.+.++...|.        .++.+++|+..+|+-+|||||++|+|..||.++++..++|.++.+..+
T Consensus       254 g~vL~vftl~~Wii~sW~~~~cER~~~~~~~~~~~~nsmWli~iTFlsiGYGDiVP~TycGr~v~l~tGivGa~~sallv  333 (489)
T KOG3684|consen  254 GTVLLVFTLSLWIIASWMLRQCERYHDSQDVTINYLNSMWLIAITFLSIGYGDIVPNTYCGRGVALLTGIVGAGCSSLLV  333 (489)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHhhHHHHHHHHhhcccCcccCCccccchHHHHhhhhhhhHHHHHH
Confidence            344455566677888888888885        259999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-HHHHHHHHhhhccchh
Q 016527          300 LYLAEARIDKR-HRRIAKWVLQREITID  326 (388)
Q Consensus       300 ~~l~~~~~~~~-~~~~~~~~~~~~~t~~  326 (388)
                      +.++..+...+ .+.+.......++|++
T Consensus       334 AvisRKLeLt~aEKhVhNFMmDtqLTk~  361 (489)
T KOG3684|consen  334 AVIARKLELTKAEKHVHNFMMDTQLTKE  361 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98886544322 2333333344444443

>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.55  E-value=1.2e-07  Score=100.57  Aligned_cols=54  Identities=20%  Similarity=0.356  Sum_probs=49.6

Q ss_pred             ccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          255 LDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       255 ~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      .-|+||++.|+|||||||..|++..-++|++++|++|++++|+++++++.++..
T Consensus       296 ~~aLyw~l~tLstvG~g~~~s~~~~E~iFsi~~mi~GllL~A~lIGNmt~~iqs  349 (727)
T KOG0498|consen  296 VYALYWGLSTLSTVGYGLVHANNMGEKIFSIFIMLFGLLLFAYLIGNMTALLQS  349 (727)
T ss_pred             HHHHHHHhhHhhhccCCccCCCCcHHHHHHHHHHHHhHHHHHHHHhhHHHhHHH
Confidence            348999999999999999999999999999999999999999999999876543

>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.35  E-value=8.7e-07  Score=94.03  Aligned_cols=89  Identities=22%  Similarity=0.366  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccccc----C-----C-------CCC----C-------Ccchhhhheeeeeeccccccc
Q 016527          102 IRQAFVLLSIYLFVGVVIYSFNTDHF----S-----G-------VET----H-------PVVDALYFCIVTMCTIGYGDI  154 (388)
Q Consensus       102 ~~~~~i~~~~~i~~g~~i~~~~~~~~----~-----~-------~~~----~-------s~~~a~yf~~vtltTVGYGdi  154 (388)
                      ...+++.+++..+.|++.|.+.....    .     .       ..+    +       -|..|+||++.||||+|||+.
T Consensus       235 a~ll~~~~l~sH~~gc~wYlia~~~~~~~~~~~tw~~~l~~~~~~~~~~~~fg~~s~~~kY~~aLyw~l~tLstvG~g~~  314 (727)
T KOG0498|consen  235 ALLLSVYLLASHWAGCIWYLIAIERPASCPRKATWLGSLGRLLSCYNLSFTFGIYSLALKYVYALYWGLSTLSTVGYGLV  314 (727)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccCccccccccccccccccCcccccccchhHHHHHHHHHHHHhhHhhhccCCcc
Confidence            35566666777788888888643111    1     0       001    0       166899999999999999999


Q ss_pred             ccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 016527          155 APLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDL  190 (388)
Q Consensus       155 ~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~  190 (388)
                      +|.+...++|+++++++|+.+++++++++.+++...
T Consensus       315 ~s~~~~E~iFsi~~mi~GllL~A~lIGNmt~~iqs~  350 (727)
T KOG0498|consen  315 HANNMGEKIFSIFIMLFGLLLFAYLIGNMTALLQSL  350 (727)
T ss_pred             CCCCcHHHHHHHHHHHHhHHHHHHHHhhHHHhHHHH
Confidence            999999999999999999999999999999998764

>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism]

Probab=98.23  E-value=4.3e-06  Score=84.13  Aligned_cols=85  Identities=20%  Similarity=0.317  Sum_probs=66.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHH
Q 016527          225 RLKVGLALGVVVLCIAIGALILFFLED-----LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAF  299 (388)
Q Consensus       225 ~~~~~~~~~~~~~~i~~g~~~~~~~e~-----~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~  299 (388)
                      .+.+.++...+..+++.|...+..+..     .+.+.++||.++|++||||||.+|.-++.++..++++.+.++++..-+
T Consensus       184 ~~ql~ll~s~l~clift~~c~i~h~qra~~k~i~lf~s~y~v~vtfstvgygd~~pd~w~sql~~vi~icval~~ip~q~  263 (1087)
T KOG3193|consen  184 FRQLLLLFSVLACLIFTGMCSIEHLQRARGKRIDLFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLIPKQL  263 (1087)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHHccCceeeeeeeEEEEEEEEeeccccccccccchhhHHHHHHHHHHHhccHHHH
Confidence            344555555555566666666555542     589999999999999999999999999999999999999988888777


Q ss_pred             HHHHHHHHHH
Q 016527          300 LYLAEARIDK  309 (388)
Q Consensus       300 ~~l~~~~~~~  309 (388)
                      ..++....++
T Consensus       264 ~~l~~tw~er  273 (1087)
T KOG3193|consen  264 DELGQTWSER  273 (1087)
T ss_pred             HHHHHHHHHH
Confidence            7777665554

>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]

Probab=98.21  E-value=1.8e-06  Score=85.48  Aligned_cols=90  Identities=22%  Similarity=0.258  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      +......+.+.+|++.+...-..++..........|.++.|+..+|+.+|||||++|.|..||.++++-.++|.++.+++
T Consensus       253 Pg~vL~vftl~~Wii~sW~~~~cER~~~~~~~~~~~~nsmWli~iTFlsiGYGDiVP~TycGr~v~l~tGivGa~~sall  332 (489)
T KOG3684|consen  253 PGTVLLVFTLSLWIIASWMLRQCERYHDSQDVTINYLNSMWLIAITFLSIGYGDIVPNTYCGRGVALLTGIVGAGCSSLL  332 (489)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHhhHHHHHHHHhhcccCcccCCccccchHHHHhhhhhhhHHHHH
Confidence            33344455556666666666666654433335567999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 016527          180 LSGVVNYVLD  189 (388)
Q Consensus       180 ~~~~~~~~~~  189 (388)
                      ++.+..-+..
T Consensus       333 vAvisRKLeL  342 (489)
T KOG3684|consen  333 VAVIARKLEL  342 (489)
T ss_pred             HHHHHHHHHH
Confidence            8887765543

>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=97.99  E-value=5.1e-06  Score=81.56  Aligned_cols=78  Identities=22%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh-------c--------------CCcccceeeeEeeeeccccCC--CccCCcCcchhh
Q 016527          228 VGLALGVVVLCIAIGALILFFLE-------D--------------LDWLDSFYLSVMSVTTVGYGD--RAFKTLPGRFFA  284 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~~e-------~--------------~s~~da~y~~~iT~tTVGyGD--i~p~t~~gr~~~  284 (388)
                      +.+.++..++.+++.++++|.+.       .              .+|.+||+|++.|+||||||.  +.|..+.+.++.
T Consensus        38 l~~f~~~y~~~~~~Fa~~y~~i~~~~gdl~~~~~~~~~~~Cv~~~~~f~~aF~FSveT~tTIGYG~~~~~~~c~~a~~l~  117 (336)
T PF01007_consen   38 LLLFVLSYLLSWLFFALLYYLIAYSHGDLEPIHADSNWTPCVSNVNSFTSAFLFSVETQTTIGYGSRYPTPECPYAIFLV  117 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTTSBTTS-TSECT-TTHHHHHHHHHHHHTT---SSSEB-CSHHHHHHHH
T ss_pred             eehhHHHHHHHHHHHHHHHHHHhhhcccchhcccccCCCCceecccchhhheeEEEEEEEEeccCCcccCCCcchhHHHH
Confidence            34444455556667777776531       1              389999999999999999999  567777888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 016527          285 AIWLLFSTLMVARAFLYLAEA  305 (388)
Q Consensus       285 ~~~~l~G~~~~~~~~~~l~~~  305 (388)
                      .+-+++|+++.+.+++.+-..
T Consensus       118 ~~q~~~g~l~~a~~~Glvfar  138 (336)
T PF01007_consen  118 TIQSLVGLLLDAFMTGLVFAR  138 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999888877643

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Inwardly-rectifying potassium channels (Kir) are the principal class of two-TM domain potassium channels. They are characterised by the property of inward-rectification, which is described as the ability to allow large inward currents and smaller outward currents. Inwardly rectifying potassium channels (Kir) are responsible for regulating diverse processes including: cellular excitability, vascular tone, heart rate, renal salt flow, and insulin release []. To date, around twenty members of this superfamily have been cloned, which can be grouped into six families by sequence similarity, and these are designated Kir1.x-6.x [, ]. Cloned Kir channel cDNAs encode proteins of between ~370-500 residues, both N- and C-termini are thought to be cytoplasmic, and the N terminus lacks a signal sequence. Kir channel alpha subunits possess only 2TM domains linked with a P-domain. Thus, Kir channels share similarity with the fifth and sixth domains, and P-domain of the other families. It is thought that four Kir subunits assemble to form a tetrameric channel complex, which may be hetero- or homomeric [].; PDB: 3AT9_A 3AUW_D 3SYA_A 3ATE_A 3SYQ_A 3SYO_A 3ATB_A 3SYC_A 3AT8_A 3ATA_A ....

>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism]

Probab=97.87  E-value=1.6e-05  Score=80.12  Aligned_cols=94  Identities=22%  Similarity=0.303  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccc-ccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHH
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTD-HFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFID  177 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~-~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~  177 (388)
                      .++.+++.+++..+.|+-....+..++ .-.+...-+.+.++||.++|++||||||.+|.-.+.++..++.+.+.++++.
T Consensus       181 sal~~ql~ll~s~l~clift~~c~i~h~qra~~k~i~lf~s~y~v~vtfstvgygd~~pd~w~sql~~vi~icval~~ip  260 (1087)
T KOG3193|consen  181 SALFRQLLLLFSVLACLIFTGMCSIEHLQRARGKRIDLFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLIP  260 (1087)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHccCceeeeeeeEEEEEEEEeeccccccccccchhhHHHHHHHHHHHhccH
Confidence            677777766655544443332222221 1112344579999999999999999999999999999999988888888888


Q ss_pred             HHHHHHHHHHHHHHH
Q 016527          178 ILLSGVVNYVLDLQE  192 (388)
Q Consensus       178 ~~~~~~~~~~~~~~~  192 (388)
                      --+..++....++|+
T Consensus       261 ~q~~~l~~tw~erqk  275 (1087)
T KOG3193|consen  261 KQLDELGQTWSERQK  275 (1087)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            777888877777764

>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]

Probab=97.81  E-value=5e-05  Score=77.30  Aligned_cols=56  Identities=23%  Similarity=0.420  Sum_probs=50.3

Q ss_pred             CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      -|..++||++.+|||||||.+.|.|...++|++..|++|-.+.+.+++.++..+.+
T Consensus       423 ~YissLYfTMt~mttvGFGNiA~~TD~EKiF~v~mMii~aLLYAtIFG~vTTI~QQ  478 (971)
T KOG0501|consen  423 AYISSLYFTMTCMTTVGFGNIAPNTDNEKIFGVCMMIIGALLYATIFGHVTTIIQQ  478 (971)
T ss_pred             eehhhhhhhhhhhhcccccccCCCccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            46789999999999999999999999999999999999999989888888765543

>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ]

Probab=97.79  E-value=2.2e-05  Score=77.15  Aligned_cols=57  Identities=25%  Similarity=0.341  Sum_probs=46.1

Q ss_pred             CCcchhhhheeeeeecccccc--cccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 016527          133 HPVVDALYFCIVTMCTIGYGD--IAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLD  189 (388)
Q Consensus       133 ~s~~~a~yf~~vtltTVGYGd--i~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~  189 (388)
                      .+|.+|++|++.|+||||||.  +.|..+.+-++.++-+++|+.+.+++++.+...+.+
T Consensus        83 ~~f~~aF~FSveT~tTIGYG~~~~~~~c~~a~~l~~~q~~~g~l~~a~~~Glvfar~sr  141 (336)
T PF01007_consen   83 NSFTSAFLFSVETQTTIGYGSRYPTPECPYAIFLVTIQSLVGLLLDAFMTGLVFARFSR  141 (336)
T ss_dssp             TTHHHHHHHHHHHHTT---SSSEB-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cchhhheeEEEEEEEEeccCCcccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            579999999999999999998  567888999999999999999999998877765543

They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Inwardly-rectifying potassium channels (Kir) are the principal class of two-TM domain potassium channels. They are characterised by the property of inward-rectification, which is described as the ability to allow large inward currents and smaller outward currents. Inwardly rectifying potassium channels (Kir) are responsible for regulating diverse processes including: cellular excitability, vascular tone, heart rate, renal salt flow, and insulin release []. To date, around twenty members of this superfamily have been cloned, which can be grouped into six families by sequence similarity, and these are designated Kir1.x-6.x [, ]. Cloned Kir channel cDNAs encode proteins of between ~370-500 residues, both N- and C-termini are thought to be cytoplasmic, and the N terminus lacks a signal sequence. Kir channel alpha subunits possess only 2TM domains linked with a P-domain. Thus, Kir channels share similarity with the fifth and sixth domains, and P-domain of the other families. It is thought that four Kir subunits assemble to form a tetrameric channel complex, which may be hetero- or homomeric [].; PDB: 3AT9_A 3AUW_D 3SYA_A 3ATE_A 3SYQ_A 3SYO_A 3ATB_A 3SYC_A 3AT8_A 3ATA_A ....

>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]

Probab=97.55  E-value=0.00019  Score=73.18  Aligned_cols=54  Identities=28%  Similarity=0.595  Sum_probs=49.8

Q ss_pred             cchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 016527          135 VVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVL  188 (388)
Q Consensus       135 ~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~  188 (388)
                      |..++||+.+.|||||||++.|.|...|+|++..+++|-.+.+.+++.+...+-
T Consensus       424 YissLYfTMt~mttvGFGNiA~~TD~EKiF~v~mMii~aLLYAtIFG~vTTI~Q  477 (971)
T KOG0501|consen  424 YISSLYFTMTCMTTVGFGNIAPNTDNEKIFGVCMMIIGALLYATIFGHVTTIIQ  477 (971)
T ss_pred             ehhhhhhhhhhhhcccccccCCCccHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            789999999999999999999999999999999999999998888888776654

>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=96.58  E-value=0.018  Score=58.21  Aligned_cols=52  Identities=21%  Similarity=0.225  Sum_probs=45.2

Q ss_pred             ceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          257 SFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDK  309 (388)
Q Consensus       257 a~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~~  309 (388)
                      |+|||..|+||+| --..|.+..-..|.++=.++|+.++|.+++.+++.+...
T Consensus       187 S~YWStLTlTTiG-e~P~P~t~~ey~F~I~d~LiGvliFAtIvG~VGsmVtnm  238 (536)
T KOG0500|consen  187 SLYWSTLTLTTIG-EQPPPVTSSEYAFVIVDTLIGVLIFATIVGNVGSMVTNM  238 (536)
T ss_pred             HHHHHhhhhhhcc-CCCCCCcCchhhHHHHHHHHHHHHHhhhhccHhHHHHhh
Confidence            8999999999997 334788888899999999999999999999888776553

>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]

Probab=96.58  E-value=0.011  Score=57.99  Aligned_cols=81  Identities=17%  Similarity=0.193  Sum_probs=57.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------CCcccceeeeEeeeeccccCCCccCCcC--
Q 016527          223 RIRLKVGLALGVVVLCIAIGALILFFLED---------------------LDWLDSFYLSVMSVTTVGYGDRAFKTLP--  279 (388)
Q Consensus       223 ~~~~~~~~~~~~~~~~i~~g~~~~~~~e~---------------------~s~~da~y~~~iT~tTVGyGDi~p~t~~--  279 (388)
                      +.|..+.+....+++-|++.+.++|++..                     .+|..||-|++-|=||||||-..+....  
T Consensus        61 kWR~~lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~~~~~~tpCV~nV~sf~sAFLFSiETQtTIGYG~R~vTeeCP~  140 (400)
T KOG3827|consen   61 KWRWMLLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDPPGENHTPCVMNVHSFTSAFLFSIETQTTIGYGFRYVTEECPE  140 (400)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCCCCcCCCcceeeccchhhhheeeeeeeeeeeccccccCccChH
Confidence            34445555455555667777777776531                     2788899999999999999998876554  


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHH
Q 016527          280 GRFFAAIWLLFSTLMVARAFLYLA  303 (388)
Q Consensus       280 gr~~~~~~~l~G~~~~~~~~~~l~  303 (388)
                      +.+..++-+++|+.+=+.+++.+-
T Consensus       141 aI~ll~~Q~I~g~ii~afm~G~i~  164 (400)
T KOG3827|consen  141 AIFLLVLQSILGVIINAFMVGAIF  164 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            556677778888877777666654

>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=96.51  E-value=0.0061  Score=61.53  Aligned_cols=91  Identities=16%  Similarity=0.255  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCC--------------------cchhhhheeeeeecccccccccCC
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHP--------------------VVDALYFCIVTMCTIGYGDIAPLT  158 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s--------------------~~~a~yf~~vtltTVGYGdi~p~t  158 (388)
                      .++..++..+++++..-|++.|.+....--+.+.|+                    |.-++||+.-|+||+| --..|.+
T Consensus       128 fri~~lv~~~~ilfHWNaClYf~iS~~~g~~~d~wvY~~i~d~~~~~c~~~n~~ReY~~S~YWStLTlTTiG-e~P~P~t  206 (536)
T KOG0500|consen  128 FRISKLVHYCLILFHWNACLYFLISKAIGFTTDDWVYPKINDPEFATCDAGNLTREYLYSLYWSTLTLTTIG-EQPPPVT  206 (536)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHhhhHhcCccccccccCCccCccccccchhHHHHHHHHHHHHHhhhhhhcc-CCCCCCc
Confidence            345555555566656556666655331111112233                    4568999999999998 3468899


Q ss_pred             cccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 016527          159 PATKVFACLFVLVGFGFIDILLSGVVNYVLDL  190 (388)
Q Consensus       159 ~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~  190 (388)
                      .....|.++-.++|+.+++.+++.+++.+...
T Consensus       207 ~~ey~F~I~d~LiGvliFAtIvG~VGsmVtnm  238 (536)
T KOG0500|consen  207 SSEYAFVIVDTLIGVLIFATIVGNVGSMVTNM  238 (536)
T ss_pred             CchhhHHHHHHHHHHHHHhhhhccHhHHHHhh
Confidence            99999999999999999999999999988764

>TIGR00933 2a38 potassium uptake protein, TrkH family

Probab=96.08  E-value=0.0043  Score=62.47  Aligned_cols=149  Identities=19%  Similarity=0.227  Sum_probs=76.2

Q ss_pred             CCcchhhhheeeeeeccccc--ccccCCcccchhhhhhhhhhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhccccccCc
Q 016527          133 HPVVDALYFCIVTMCTIGYG--DIAPLTPATKVFACLFVLVGFGFIDIL--LSGVVNYVLDLQENMILTGIQMGKVKEGF  208 (388)
Q Consensus       133 ~s~~~a~yf~~vtltTVGYG--di~p~t~~gr~~~~~~~l~Gi~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~  208 (388)
                      ....++.++...+++|.||.  |..--++..+++.++.+++|=.--+..  +....-.++-   +...+.+++..+....
T Consensus       230 ~~~~~~~f~~~s~~~T~Gfst~d~~~~~~~~~lll~~lMfIGg~~gSTaGGiK~~r~~vl~---~~~~~~~~~~~~~~~v  306 (390)
T TIGR00933       230 GALLLSAFFQSSTLRTAGFSTIDFAALPTATLVLLLLLMFIGGCSGSTAGGIKTTTFAILL---KQVYREIRRGIHPRII  306 (390)
T ss_pred             HHHHHHHHHHHhhccCCCccccChhhcCHHHHHHHHHHHHHcCCCcccCCchHHHHHHHHH---HHHHHHHHccCCCceE
Confidence            35788999999999999996  444446677777777777663221110  0000001111   1112222212211110


Q ss_pred             ccccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCcccceeeeEeeeeccccCCCc--c-CCcCcc
Q 016527          209 SARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLE----DLDWLDSFYLSVMSVTTVGYGDRA--F-KTLPGR  281 (388)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e----~~s~~da~y~~~iT~tTVGyGDi~--p-~t~~gr  281 (388)
                      ..+.  .+    ...+.......+..+ +++.++..+....+    +.++.|+++=++.+++|||.+=-.  | -++.+|
T Consensus       307 ~~~~--i~----~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~fe~~Sa~~tvGls~g~~~~~l~~~~k  379 (390)
T TIGR00933       307 FSRR--IG----GKTIDKAILISVWSF-FLVFALIFLLSILELISSGYDFLTSLFEVVSAFGTVGLSVGLTTANLPDAGK  379 (390)
T ss_pred             EeEE--EC----CeehHHHHHHHHHHH-HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhcCcCCCCCCCcccCCHHHH
Confidence            0000  11    111222221111111 11112222232333    689999999999999999986532  3 466789


Q ss_pred             hhhHHHHHHH
Q 016527          282 FFAAIWLLFS  291 (388)
Q Consensus       282 ~~~~~~~l~G  291 (388)
                      ++.++.|++|
T Consensus       380 ~il~~~M~~G  389 (390)
T TIGR00933       380 LILIVLMFIG  389 (390)
T ss_pred             HHHHHHHHcC
Confidence            9988888876

The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.

>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins

Probab=95.79  E-value=0.013  Score=51.74  Aligned_cols=50  Identities=24%  Similarity=0.492  Sum_probs=38.5

Q ss_pred             CCcchhhhheeeeeecccccccccC-----Ccccchhhhhhhh-hhhHHHHHHHHH
Q 016527          133 HPVVDALYFCIVTMCTIGYGDIAPL-----TPATKVFACLFVL-VGFGFIDILLSG  182 (388)
Q Consensus       133 ~s~~~a~yf~~vtltTVGYGdi~p~-----t~~gr~~~~~~~l-~Gi~~~~~~~~~  182 (388)
                      .++..|+|+.+.++||.|+||..|.     +..+.++.+.+.+ .++.++.++++.
T Consensus       144 ~~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliav  199 (200)
T PF00520_consen  144 DSFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAV  199 (200)
T ss_dssp             SSHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhc
Confidence            5689999999999999999999997     7777777745544 444566666553

The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....

>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]

Probab=95.78  E-value=0.027  Score=55.41  Aligned_cols=91  Identities=20%  Similarity=0.320  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcc--cccCC---CC--------CCCcchhhhheeeeeecccccccccC--Ccccch
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNT--DHFSG---VE--------THPVVDALYFCIVTMCTIGYGDIAPL--TPATKV  163 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~--~~~~~---~~--------~~s~~~a~yf~~vtltTVGYGdi~p~--t~~gr~  163 (388)
                      +.++......++-|+++|++.|.+..  ++...   ..        -.+|..||-|++.|=||||||..++.  -|.+-+
T Consensus        64 ~~lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~~~~~~tpCV~nV~sf~sAFLFSiETQtTIGYG~R~vTeeCP~aI~  143 (400)
T KOG3827|consen   64 WMLLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDPPGENHTPCVMNVHSFTSAFLFSIETQTTIGYGFRYVTEECPEAIF  143 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCCCCcCCCcceeeccchhhhheeeeeeeeeeeccccccCccChHHHH
Confidence            34444455556667777777776543  11111   11        24688999999999999999977654  466667


Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHH
Q 016527          164 FACLFVLVGFGFIDILLSGVVNYVLD  189 (388)
Q Consensus       164 ~~~~~~l~Gi~~~~~~~~~~~~~~~~  189 (388)
                      ..++-+++|+.+=+..++.+..-+.+
T Consensus       144 ll~~Q~I~g~ii~afm~G~i~aKiar  169 (400)
T KOG3827|consen  144 LLVLQSILGVIINAFMVGAIFAKIAR  169 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            77777788877777776666555443

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=95.62  E-value=0.018  Score=42.20  Aligned_cols=56  Identities=27%  Similarity=0.567  Sum_probs=41.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHH-hhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQ-FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|.. ..+...+ ...++++.+..++ |+..|.|+||.|+.+|..
T Consensus         6 F~~~D~d~~G~i~~~el~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~   63 (66)
T PF13499_consen    6 FKKFDKDGDGYISKEELR-RALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFL   63 (66)
T ss_dssp             HHHHSTTSSSEEEHHHHH-HHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHH
T ss_pred             HHHHcCCccCCCCHHHHH-HHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHh
Confidence            456789999999988854 4444444 3446667665555 999999999999999864

...

>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=95.44  E-value=0.036  Score=57.28  Aligned_cols=78  Identities=15%  Similarity=0.298  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc--------C-------CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHH
Q 016527          228 VGLALGVVVLCIAIGALILFFLED--------L-------DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFST  292 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~~e~--------~-------s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~  292 (388)
                      +...+.-++-.+-+-+++||....        |       .|+-|+||++-|++|+| |-..|.+....+|..+--+.|+
T Consensus       363 V~rT~~YmlyilHinacvYY~~SayqglG~~rWVydg~Gn~YiRCyyfa~kt~~tiG-~~P~P~~~~E~Vf~~~~w~mGV  441 (815)
T KOG0499|consen  363 VIRTTGYLLYILHINACVYYWASAYQGLGTTRWVYDGEGNEYIRCYYFAVKTLITIG-GLPEPQTLFEIVFQLLNWFMGV  441 (815)
T ss_pred             hHHHHHHHHHHHhhhHHHHHHHHhhcccccceeEEcCCCCceeeehhhHHHHHHHhc-CCCCcchHHHHHHHHHHHHHHH
Confidence            333333334445566777776532        3       78999999999999999 8888988877778777778899


Q ss_pred             HHHHHHHHHHHHHH
Q 016527          293 LMVARAFLYLAEAR  306 (388)
Q Consensus       293 ~~~~~~~~~l~~~~  306 (388)
                      .+|+..++.+-+.+
T Consensus       442 FvFslliGQmRDvi  455 (815)
T KOG0499|consen  442 FVFSLLIGQMRDVI  455 (815)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999988876543

>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins

Probab=95.08  E-value=0.02  Score=50.61  Aligned_cols=49  Identities=18%  Similarity=0.293  Sum_probs=38.1

Q ss_pred             CcccceeeeEeeeeccccCCCccC-----CcCcchhh-HHHHHHHHHHHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDRAFK-----TLPGRFFA-AIWLLFSTLMVARAFLY  301 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi~p~-----t~~gr~~~-~~~~l~G~~~~~~~~~~  301 (388)
                      ++..|+||.+.++||.|+||..|.     +..+.++. ++.++.++.+++..++.
T Consensus       145 ~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliav  199 (200)
T PF00520_consen  145 SFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAV  199 (200)
T ss_dssp             SHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhc
Confidence            788899999999999999999987     67777777 44444555666666654

The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....

>TIGR00933 2a38 potassium uptake protein, TrkH family

Probab=94.80  E-value=0.044  Score=55.22  Aligned_cols=39  Identities=13%  Similarity=0.181  Sum_probs=30.3

Q ss_pred             CcccceeeeEeeeeccccCCC--ccCCcCcchhhHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDR--AFKTLPGRFFAAIWLLFS  291 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi--~p~t~~gr~~~~~~~l~G  291 (388)
                      ...++.++.+.+++|.||.-.  .--++..+++.++.|++|
T Consensus       231 ~~~~~~f~~~s~~~T~Gfst~d~~~~~~~~~lll~~lMfIG  271 (390)
T TIGR00933       231 ALLLSAFFQSSTLRTAGFSTIDFAALPTATLVLLLLLMFIG  271 (390)
T ss_pred             HHHHHHHHHHhhccCCCccccChhhcCHHHHHHHHHHHHHc
Confidence            368888999999999999643  333456788888888887

The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=94.80  E-value=0.04  Score=47.76  Aligned_cols=56  Identities=18%  Similarity=0.243  Sum_probs=44.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChH--HHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEK--DISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e--~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..+|...+-......+.+  ...++.+.|+..|.|++|.|+.++|.
T Consensus        51 ~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~  108 (151)
T KOG0027|consen   51 KEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELK  108 (151)
T ss_pred             HHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHH
Confidence            345777889999999876655555544443  47788999999999999999999984

>PRK10750 potassium transporter; Provisional

Probab=94.78  E-value=0.082  Score=54.77  Aligned_cols=45  Identities=11%  Similarity=0.175  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeeccccc
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYG  152 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYG  152 (388)
                      ...+.+..+-+.+-+++++.|+.        .+.+++||+..++.+++|=||.
T Consensus       180 ~ta~~l~~iY~~lT~~~~~ll~~--------~Gm~~fdAi~ha~saisTgGFs  224 (483)
T PRK10750        180 ETAKTLWLIYVLLTVACALALWF--------AGMDAFDAIGHSFSTIAIGGFS  224 (483)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--------cCCcHHHHHHHHHHHHhccCcC
Confidence            33444444444455556666655        3467999999999999999985

>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A

Probab=94.64  E-value=0.019  Score=34.15  Aligned_cols=22  Identities=23%  Similarity=0.566  Sum_probs=19.0

Q ss_pred             HHHHhhhcCCCCCCccChhhhc
Q 016527          363 ICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       363 i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      |.+.|++.|.|+||.|+.+|+.
T Consensus         1 l~~~F~~~D~d~DG~is~~E~~   22 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEEFQ   22 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHHHH
Confidence            3567999999999999999874

...

>PRK10750 potassium transporter; Provisional

Probab=94.02  E-value=0.13  Score=53.21  Aligned_cols=59  Identities=15%  Similarity=0.246  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCC------ccCCcCcchhhHHHHHHH
Q 016527          232 LGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDR------AFKTLPGRFFAAIWLLFS  291 (388)
Q Consensus       232 ~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi------~p~t~~gr~~~~~~~l~G  291 (388)
                      +.+.++.+++++.++ ..++.+..+|+-=++.++++||.|=-      ..-++.+|++.++.|++|
T Consensus       401 ~~ly~~~~~~~~~~l-~~~g~~~~sA~~~v~s~l~nvG~s~G~~~~~f~~l~~~~K~il~~~MllG  465 (483)
T PRK10750        401 FSAYALVFIVSMLAI-IATGVDDFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFG  465 (483)
T ss_pred             HHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHhcCCCCCchhhccccccCCHHHHHHHHHHHHHH
Confidence            333334444455444 56677888898877788888887542      234577999999999998

>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand

Probab=93.93  E-value=0.031  Score=34.52  Aligned_cols=23  Identities=22%  Similarity=0.486  Sum_probs=19.8

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+-|+..|.|+||.|+.+++.
T Consensus         1 E~~~~F~~~D~d~dG~I~~~Ef~   23 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEEFK   23 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHH
Confidence            35677999999999999999875

This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....

>PRK05482 potassium-transporting ATPase subunit A; Provisional

Probab=93.75  E-value=0.23  Score=51.77  Aligned_cols=145  Identities=18%  Similarity=0.231  Sum_probs=79.5

Q ss_pred             cchhhhheeeeeeccc-cccccc-CCcccchhhhhhhhhh-hHH--HHHHHHHHHHH-HHHHHHHHHHHHhhccccccCc
Q 016527          135 VVDALYFCIVTMCTIG-YGDIAP-LTPATKVFACLFVLVG-FGF--IDILLSGVVNY-VLDLQENMILTGIQMGKVKEGF  208 (388)
Q Consensus       135 ~~~a~yf~~vtltTVG-YGdi~p-~t~~gr~~~~~~~l~G-i~~--~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~  208 (388)
                      ...|+|-+++|-||-| +-.+.. -++.+..+.++.+++| ...  .+--+-.+..+ ++-....-   .++ .|..+.|
T Consensus       329 ~~salF~svTtrtTaG~fNsm~dsltp~~~lv~m~lMfIG~~~pGGtGgGl~~~~tfaIL~vfi~g---lmv-Grtpe~~  404 (559)
T PRK05482        329 AASALFAVVTTAASTGAVNAMHDSLTPLGGLVPLLNMQLGEVIFGGVGSGLYGMLVFVILAVFIAG---LMV-GRTPEYL  404 (559)
T ss_pred             HHHHHHHHHHhhhhcchHHHHHHhhccHHHHHHHHHHHhCCCCCccchHhHHHHHHHHHHHHHHHh---Hcc-CCCCeEE
Confidence            5678888888887888 544422 3778888888888887 321  11111110011 00000011   111 1222222


Q ss_pred             ccccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHH-H-------hhc--CCcccceeeeEeeeecccc--CCCccC
Q 016527          209 SARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILF-F-------LED--LDWLDSFYLSVMSVTTVGY--GDRAFK  276 (388)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~-~-------~e~--~s~~da~y~~~iT~tTVGy--GDi~p~  276 (388)
                      .++       -+...+++ ....+.+..+++++++.+.. .       .|+  +++.+.+|=.+....|+|.  |++.+.
T Consensus       405 gRk-------I~~~eik~-A~~vilv~~~lVl~~taial~~~~~~~~~~n~g~hgfseiLyE~~SA~~tnGss~gGLt~~  476 (559)
T PRK05482        405 GKK-------IEAREMKL-AALAILVHPLLVLVGTALALATPAGRAGISNPGPHGFSEVLYAYTSAAANNGSAFAGLGAN  476 (559)
T ss_pred             ccc-------cCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccccccccCCCCCCHHHHHHHHHhhccccccccccCCCC
Confidence            211       01112222 22233333334444443333 3       332  6889999999999999996  458899


Q ss_pred             CcCcchhhHHHHHHH
Q 016527          277 TLPGRFFAAIWLLFS  291 (388)
Q Consensus       277 t~~gr~~~~~~~l~G  291 (388)
                      |..+++..++.|++|
T Consensus       477 t~~~niil~~~M~iG  491 (559)
T PRK05482        477 TPFWNLTLGIAMLLG  491 (559)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999998

>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=93.64  E-value=0.065  Score=55.45  Aligned_cols=89  Identities=25%  Similarity=0.277  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcc-------cccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhh
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNT-------DHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVG  172 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~-------~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~G  172 (388)
                      +.++...-++.++.+-+++.|+...       .+-.+.++.+|.-++||++-|++||| |.-.|.+...-+|..+--+.|
T Consensus       362 RV~rT~~YmlyilHinacvYY~~SayqglG~~rWVydg~Gn~YiRCyyfa~kt~~tiG-~~P~P~~~~E~Vf~~~~w~mG  440 (815)
T KOG0499|consen  362 RVIRTTGYLLYILHINACVYYWASAYQGLGTTRWVYDGEGNEYIRCYYFAVKTLITIG-GLPEPQTLFEIVFQLLNWFMG  440 (815)
T ss_pred             hhHHHHHHHHHHHhhhHHHHHHHHhhcccccceeEEcCCCCceeeehhhHHHHHHHhc-CCCCcchHHHHHHHHHHHHHH
Confidence            4455444444444555555444422       11123456789999999999999999 888888888877877777899


Q ss_pred             hHHHHHHHHHHHHHHHH
Q 016527          173 FGFIDILLSGVVNYVLD  189 (388)
Q Consensus       173 i~~~~~~~~~~~~~~~~  189 (388)
                      +.+++++++.+-+.+..
T Consensus       441 VFvFslliGQmRDvi~a  457 (815)
T KOG0499|consen  441 VFVFSLLIGQMRDVIGA  457 (815)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999887764

>PF00060 Lig_chan: Ligand-gated ion channel; InterPro: IPR001320 The ability of synapses to modify their synaptic strength in response to activity is a fundamental property of the nervous system and may be an essential component of learning and memory

Probab=93.08  E-value=0.1  Score=44.41  Aligned_cols=58  Identities=9%  Similarity=0.224  Sum_probs=44.1

Q ss_pred             CCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016527          133 HPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQ  191 (388)
Q Consensus       133 ~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~~  191 (388)
                      .++.+++|+++.+++. +-++..|.+..+|++.+++.+..+.+.+...+.+.+.+...+
T Consensus        43 ~~~~~~~~~~~~~~~~-q~~~~~~~s~s~Ril~~~w~l~~lil~~~Yta~L~s~Lt~~~  100 (148)
T PF00060_consen   43 FSLSNSFWYTFGTLLQ-QGSSIRPRSWSGRILLAFWWLFSLILIASYTANLTSFLTVPK  100 (148)
T ss_dssp             HHHHHHHHHCCCCCHH-HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred             ccHHHHHHHHHHhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            4577899999888776 667799999999999999999999999999999988876554

There are three classes of ionotropic glutamate receptor, namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [].; GO: 0004970 ionotropic glutamate receptor activity, 0005234 extracellular-glutamate-gated ion channel activity, 0016020 membrane; PDB: 3FAT_A 3KFM_A 3KEI_A 3EN3_A 3EPE_B 3FAS_A 2F34_A 3C34_B 3S2V_A 3GBB_B ....

>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B

Probab=92.11  E-value=0.086  Score=32.72  Aligned_cols=22  Identities=23%  Similarity=0.398  Sum_probs=18.6

Q ss_pred             HHHHhhhcCCCCCCccChhhhc
Q 016527          363 ICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       363 i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +.+-|+..|.|++|.|+.+|+.
T Consensus         2 l~~~F~~~D~d~dG~I~~~el~   23 (31)
T PF13405_consen    2 LREAFKMFDKDGDGFIDFEELR   23 (31)
T ss_dssp             HHHHHHHH-TTSSSEEEHHHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHHHH
Confidence            5677999999999999999975

...

>PF00060 Lig_chan: Ligand-gated ion channel; InterPro: IPR001320 The ability of synapses to modify their synaptic strength in response to activity is a fundamental property of the nervous system and may be an essential component of learning and memory

Probab=92.05  E-value=0.072  Score=45.32  Aligned_cols=56  Identities=20%  Similarity=0.289  Sum_probs=43.0

Q ss_pred             CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDK  309 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~~  309 (388)
                      ++.+++|+++.+++. +-++..|.+..+|++.++|.++++.+.+...+.+++.+...
T Consensus        44 ~~~~~~~~~~~~~~~-q~~~~~~~s~s~Ril~~~w~l~~lil~~~Yta~L~s~Lt~~   99 (148)
T PF00060_consen   44 SLSNSFWYTFGTLLQ-QGSSIRPRSWSGRILLAFWWLFSLILIASYTANLTSFLTVP   99 (148)
T ss_dssp             HHHHHHHHCCCCCHH-HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             cHHHHHHHHHHhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            467789999888877 66778999999999999999999999999999999876654

There are three classes of ionotropic glutamate receptor, namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [].; GO: 0004970 ionotropic glutamate receptor activity, 0005234 extracellular-glutamate-gated ion channel activity, 0016020 membrane; PDB: 3FAT_A 3KFM_A 3KEI_A 3EN3_A 3EPE_B 3FAS_A 2F34_A 3C34_B 3S2V_A 3GBB_B ....

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=91.57  E-value=0.23  Score=45.02  Aligned_cols=59  Identities=25%  Similarity=0.446  Sum_probs=41.9

Q ss_pred             hhhhhcCCCCccchhHHHH---HHHHHhcC----CChHHHHHHH-HHhhhcCCCCCCccChhhhccC
Q 016527          328 LLAADMNHNGFISKSEYVI---FKLKEMGK----IGEKDISQIC-NQFNRLDPNNCGKITLPDLLEN  386 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~---~~L~~~g~----i~~e~i~~i~-~~F~~ld~~~~g~l~~~d~~~~  386 (388)
                      +...|.|+||.+++.|.+.   ..+..+|.    -.++..++.. +-|.+.|.|+||.||.+|-.++
T Consensus       106 F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~  172 (193)
T KOG0044|consen  106 FRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG  172 (193)
T ss_pred             heeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence            5567899999999988432   34444454    3344444444 4499999999999999998764

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=91.31  E-value=0.35  Score=33.78  Aligned_cols=45  Identities=22%  Similarity=0.553  Sum_probs=31.9

Q ss_pred             CCccchhHHHHHHHHHhc-C-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          336 NGFISKSEYVIFKLKEMG-K-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       336 ~~~~~~~e~~~~~L~~~g-~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +|.++..++.... ..+| + .+++++..   -|...|.|++|.|+.+|..
T Consensus         2 ~G~i~~~~~~~~l-~~~g~~~~s~~e~~~---l~~~~D~~~~G~I~~~EF~   48 (54)
T PF13833_consen    2 DGKITREEFRRAL-SKLGIKDLSEEEVDR---LFREFDTDGDGYISFDEFI   48 (54)
T ss_dssp             SSEEEHHHHHHHH-HHTTSSSSCHHHHHH---HHHHHTTSSSSSEEHHHHH
T ss_pred             cCEECHHHHHHHH-HHhCCCCCCHHHHHH---HHHhcccCCCCCCCHHHHH
Confidence            5777777765444 5543 4 77887664   4566699999999998865

...

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=90.44  E-value=0.69  Score=33.38  Aligned_cols=52  Identities=23%  Similarity=0.293  Sum_probs=37.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|. ...+...|. +++++.++   |+..|.+++|.|+.++..
T Consensus         5 F~~~D~~~~G~i~~~el-~~~l~~~g~-~~~~~~~i---~~~~d~~~~g~i~~~ef~   56 (67)
T cd00052           5 FRSLDPDGDGLISGDEA-RPFLGKSGL-PRSVLAQI---WDLADTDKDGKLDKEEFA   56 (67)
T ss_pred             HHHhCCCCCCcCcHHHH-HHHHHHcCC-CHHHHHHH---HHHhcCCCCCcCCHHHHH
Confidence            34567888999988774 445556664 77776665   556688999999988764

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>COG0168 TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]

Probab=90.28  E-value=1.3  Score=46.18  Aligned_cols=65  Identities=22%  Similarity=0.208  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCcc--CCcCc------chhhHHHHHHH
Q 016527          227 KVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAF--KTLPG------RFFAAIWLLFS  291 (388)
Q Consensus       227 ~~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p--~t~~g------r~~~~~~~l~G  291 (388)
                      +....+.+.++.+++++.+....+.-++.|+++=++.++.|||.|=-.+  .+..+      |++.++.|++|
T Consensus       398 ~~~~~~~l~~~~~~i~~~~l~~~~~~~~~~~lfEv~SA~gtVGlSlG~t~~~~~~~~~~~~~K~vli~~M~~G  470 (499)
T COG0168         398 KALAFFFLYLLILIIGALILILTGYDPFIDALFEVVSAFGTVGLSLGITGDLASNFALPPLAKLVLIALMLIG  470 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHhhcCCCCCCCCCCCccccccCchHHHHHHHHHHhh
Confidence            3333444444555666666666654489999999999999999854332  34444      88888888888

>PF02386 TrkH: Cation transport protein; InterPro: IPR003445 This family consists of various potassium transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J (3

Probab=90.26  E-value=0.26  Score=48.98  Aligned_cols=150  Identities=15%  Similarity=0.155  Sum_probs=64.2

Q ss_pred             cchhhhheeeeeeccccc--ccccCCcccchhhhhhhhhhhHHHHHH--HHHHHHHHHHHHHHHHHHHhhccc-cccCcc
Q 016527          135 VVDALYFCIVTMCTIGYG--DIAPLTPATKVFACLFVLVGFGFIDIL--LSGVVNYVLDLQENMILTGIQMGK-VKEGFS  209 (388)
Q Consensus       135 ~~~a~yf~~vtltTVGYG--di~p~t~~gr~~~~~~~l~Gi~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~  209 (388)
                      ...+.++...+.+|-||.  |+.--++..+++.++.+++|=.-.+..  +....-.+.-+..+.+.|.....+ ....+.
T Consensus       177 ~~~~~f~~~s~~rTtGF~t~d~~~~~~~~~~l~~~lM~IGg~~gSTaGGiK~~r~~il~~~~~~~~~~~~p~~~~~~~~~  256 (354)
T PF02386_consen  177 KRLSAFFQVSSLRTTGFSTVDISQWSPFTLLLLIILMFIGGSPGSTAGGIKITRFAILLKSIREIKRLIHPGAVSPVRFN  256 (354)
T ss_dssp             HHHHHHHHHHTTTT----S---SS--THHHHHHHHHTTS-S-TTSS--SS-HHHHHHHHHHHHHHHHHH-SSS-----SS
T ss_pred             HHHHHHHHHhhcCCcccCccChhhCCHHHHHHHHHHHHhcCccccccCCcceehhhHHHhhHHHHHHHhcCCCccceeec
Confidence            456777888899999996  333345667777777777663322111  111110111111111111111111 111111


Q ss_pred             cccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cccceeeeEeeeeccccCCCc--c-CCcC---cch
Q 016527          210 ARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLD-WLDSFYLSVMSVTTVGYGDRA--F-KTLP---GRF  282 (388)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e~~s-~~da~y~~~iT~tTVGyGDi~--p-~t~~---gr~  282 (388)
                      .+.  .+     .+...+....+.+.++.+++++.++...+... +.|+++=++..++|||.+=-.  | -+..   +|+
T Consensus       257 ~r~--i~-----~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lfe~~Sa~gtvGls~G~~~~~~s~~~~~~K~  329 (354)
T PF02386_consen  257 GRR--IS-----EQTVRKAFAFFFLYFIIVFISTLLLSLDGLDFSFFDALFEVISAFGTVGLSLGITTPNLSFSGPFSKL  329 (354)
T ss_dssp             S-----T-----TSHHHHHCCHHHHHHHHHHHHHHHHHHHSS-H--HHHHHHHHHHCTT--S--SSS----SSS-HHHHH
T ss_pred             cee--ec-----hhhhhhHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHhcCcCCCCCCCCCCccchhhHHHH
Confidence            111  01     11122222233333444455555555555443 699999999999999875433  2 2444   899


Q ss_pred             hhHHHHHHH
Q 016527          283 FAAIWLLFS  291 (388)
Q Consensus       283 ~~~~~~l~G  291 (388)
                      +.++.|++|
T Consensus       330 vli~~M~~G  338 (354)
T PF02386_consen  330 VLIFLMLLG  338 (354)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999999988

6.1.34 from EC). These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH from Escherichia coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in this organism []. This protein interacts with TrkA and requires TrkE for transport activity.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport; PDB: 3PJZ_A.

>smart00027 EH Eps15 homology domain

Probab=89.05  E-value=0.36  Score=38.33  Aligned_cols=30  Identities=27%  Similarity=0.309  Sum_probs=25.4

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++++++..+.+.|+.+|.|++|.|+.+||.
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~   33 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAK   33 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            467888888899999999999999888874

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PTZ00183 centrin; Provisional

Probab=87.98  E-value=1.1  Score=38.20  Aligned_cols=54  Identities=17%  Similarity=0.211  Sum_probs=40.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+..........++++++..+.   ..+|.|++|.|+.+|..
T Consensus        96 F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~---~~~d~~~~g~i~~~ef~  149 (158)
T PTZ00183         96 FRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMI---DEADRNGDGEISEEEFY  149 (158)
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---HHhCCCCCCcCcHHHHH
Confidence            4567888999999888765554444568888877665   55688999999998874

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=87.75  E-value=1.2  Score=40.24  Aligned_cols=55  Identities=22%  Similarity=0.456  Sum_probs=39.1

Q ss_pred             hhhhhcCCCCccchhHHHH--HHHHH-hcCCChHHHHHHHHH-hhhcCCCCCCccChhh
Q 016527          328 LLAADMNHNGFISKSEYVI--FKLKE-MGKIGEKDISQICNQ-FNRLDPNNCGKITLPD  382 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~--~~L~~-~g~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d  382 (388)
                      +..-|.+.+|++++.|...  .++.. ....+++.+.++.++ |.+-|.|+||.|+.+|
T Consensus       110 F~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeE  168 (187)
T KOG0034|consen  110 FRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEE  168 (187)
T ss_pred             HHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            3556889999999887433  22222 122236777777766 9999999999999886

>TIGR00934 2a38euk potassium uptake protein, Trk family

Probab=86.01  E-value=0.8  Score=49.71  Aligned_cols=173  Identities=17%  Similarity=0.164  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHhhhhhhcccccCCCCCCC----cchhhhheeeeeeccccc--ccccCCcccchhhhhhhhhhhHHHHH
Q 016527          105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHP----VVDALYFCIVTMCTIGYG--DIAPLTPATKVFACLFVLVGFGFIDI  178 (388)
Q Consensus       105 ~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s----~~~a~yf~~vtltTVGYG--di~p~t~~gr~~~~~~~l~Gi~~~~~  178 (388)
                      ++...+++++++.+.|++.+-+.+.....+    +.+|++-++.+ =|-||-  |+.-.+++.+++.++.|++|..=++.
T Consensus       587 ll~tt~iL~~ig~ilf~lLE~nn~tl~~lp~g~Ril~aLFQSVst-RTAGFntVdls~Lspatlvl~iiLMyIGa~Ptag  665 (800)
T TIGR00934       587 LFFTLVGLNAIDLILFIILDWGSSVVDGLSKGIKVLNGLFQSVST-RTAGFTVVDLSQLHPAIQVSYMLMMYVSVLPLAI  665 (800)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHhccc-ccccccccchHhcChhHHHHHHHHHHhccCCccc
Confidence            444555566777776666442211112222    55666666654 666775  44555778888888888777543222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccCcccccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-------
Q 016527          179 LLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLED-------  251 (388)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e~-------  251 (388)
                      .+.. .+...+... -+. ..+..+.....          .++.-....+...+.+.+.+++++.+++...|+       
T Consensus       666 gIK~-TTvyee~sL-gi~-~~~g~~~~~~~----------~~rsi~~~~irrqLs~dlw~I~l~~flI~I~E~~~l~~~~  732 (800)
T TIGR00934       666 SIRR-TNVYEEQSL-GLY-NEENEEHEGES----------STKSFIGAHLRRQLSFDLWYIFLGLFIICICEGRKIQDPD  732 (800)
T ss_pred             eeec-eeeeheehe-eee-eccCCcccccc----------ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence            2110 000000000 000 00111000000          001111112233333445566677777777774       


Q ss_pred             ---CCcccceeeeEeeeeccccCCCcc---------CCcCcchhhHHHHHHH
Q 016527          252 ---LDWLDSFYLSVMSVTTVGYGDRAF---------KTLPGRFFAAIWLLFS  291 (388)
Q Consensus       252 ---~s~~da~y~~~iT~tTVGyGDi~p---------~t~~gr~~~~~~~l~G  291 (388)
                         .++++.++=++..+.|||+-=-.|         -+..||++.++.|+.|
T Consensus       733 ~~~fs~f~ILFEVVSAyGTVGLSlG~p~~~~SfSg~ls~~sKLVII~vM~~G  784 (800)
T TIGR00934       733 PPNFNVFNILFEVVSAYGTVGLSLGYSCSNYSFSGQFTTLSKLVIIAMLIRG  784 (800)
T ss_pred             cccccHHHHHhhhhhhccceeecCCCCCcccccCCCCCcchHHHHhHHHHcc
Confidence               356777777777888888755433         2566888888888876

The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=85.71  E-value=1.6  Score=37.51  Aligned_cols=53  Identities=17%  Similarity=0.453  Sum_probs=39.8

Q ss_pred             hhhcCCCCccchhHHHHHHHH--HhcCCChHHHHHHHHH-hhhcCCCCCCccChhhh
Q 016527          330 AADMNHNGFISKSEYVIFKLK--EMGKIGEKDISQICNQ-FNRLDPNNCGKITLPDL  383 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~--~~g~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~  383 (388)
                      .-|-|.|+++...+- ..++.  ..+..++|++..++++ .++-|.||||+|+..|.
T Consensus       116 IYDfd~D~~i~~~DL-~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eF  171 (189)
T KOG0038|consen  116 IYDFDGDEFIGHDDL-EKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEF  171 (189)
T ss_pred             EeecCCCCcccHHHH-HHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHH
Confidence            346778888876652 22332  2377889999999988 69999999999998874

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=85.48  E-value=0.48  Score=34.45  Aligned_cols=23  Identities=22%  Similarity=0.437  Sum_probs=20.6

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+.|+.+|.|++|.|+..|+.
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~   23 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELR   23 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHH
Confidence            36788999999999999999985

...

>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]

Probab=85.19  E-value=0.56  Score=49.02  Aligned_cols=80  Identities=10%  Similarity=0.195  Sum_probs=63.6

Q ss_pred             HHHHHHHHhhhhhhccc-----------ccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHH
Q 016527          109 LSIYLFVGVVIYSFNTD-----------HFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFID  177 (388)
Q Consensus       109 ~~~~i~~g~~i~~~~~~-----------~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~  177 (388)
                      .+..++++..+|++...           ...+.+..++..|.||+.-.+..-|-|+-.|.+...|++.++|+=+.+.+++
T Consensus       577 ~~SVhvVal~lYlLDrfSPFgRFk~~ds~~~ee~alnlssAmWF~WGVLLNSGigEgtPRSfSARvLGmVWaGFaMIiVA  656 (993)
T KOG4440|consen  577 GLSVHVVALMLYLLDRFSPFGRFKVNDSEEEEEDALNLSSAMWFSWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVA  656 (993)
T ss_pred             HHHHHHHHHHHHHHHhcCcccceeeccCccchhhhcchhhhHHHHhHhhhccccCCCCCcchhHHHHHHHHhhhheeeeh
Confidence            34456677777877541           1111234678899999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHH
Q 016527          178 ILLSGVVNYVL  188 (388)
Q Consensus       178 ~~~~~~~~~~~  188 (388)
                      ...+++..+++
T Consensus       657 SYTANLAAFLV  667 (993)
T KOG4440|consen  657 SYTANLAAFLV  667 (993)
T ss_pred             hhhhhhhhhee
Confidence            88888888775

>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

Probab=84.95  E-value=2.5  Score=28.96  Aligned_cols=52  Identities=27%  Similarity=0.422  Sum_probs=35.5

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..++. ..+... ...+++.+..   -|+..|.+++|.|+.++..
T Consensus         7 ~~~d~~~~g~l~~~e~~-~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~ef~   59 (63)
T cd00051           7 RLFDKDGDGTISADELK-AALKSLGEGLSEEEIDE---MIREVDKDGDGKIDFEEFL   59 (63)
T ss_pred             HHhCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHH---HHHHhCCCCCCeEeHHHHH
Confidence            44577888988887754 344444 3455555554   4666788999999998864

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=84.88  E-value=1.6  Score=38.41  Aligned_cols=55  Identities=22%  Similarity=0.503  Sum_probs=41.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhcc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~~  385 (388)
                      .+...|.|++|+++..+ +.+.|+.+| +.++++++.+   ++..|.|++|.|+.+|...
T Consensus        97 aF~~fD~d~dG~Is~~e-L~~vl~~lge~~~deev~~l---l~~~d~d~dG~i~~~eF~~  152 (160)
T COG5126          97 AFKLFDKDHDGYISIGE-LRRVLKSLGERLSDEEVEKL---LKEYDEDGDGEIDYEEFKK  152 (160)
T ss_pred             HHHHhCCCCCceecHHH-HHHHHHhhcccCCHHHHHHH---HHhcCCCCCceEeHHHHHH
Confidence            45677999999999877 556676664 5667777755   5556889999999988654

>PLN02964 phosphatidylserine decarboxylase

Probab=84.84  E-value=1.3  Score=47.51  Aligned_cols=52  Identities=25%  Similarity=0.372  Sum_probs=38.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|++|.++..||+..+ ..++. .++++   +.+.|+..|.|++|.|+.+||.
T Consensus       186 ~~~D~DgdG~IdfdEFl~lL-~~lg~~~seEE---L~eaFk~fDkDgdG~Is~dEL~  238 (644)
T PLN02964        186 AIVDYDEDGQLSFSEFSDLI-KAFGNLVAANK---KEELFKAADLNGDGVVTIDELA  238 (644)
T ss_pred             HHhCCCCCCeEcHHHHHHHH-HHhccCCCHHH---HHHHHHHhCCCCCCcCCHHHHH
Confidence            34578889999988876543 34553 34444   5577888899999999999985

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=84.80  E-value=1.9  Score=33.95  Aligned_cols=52  Identities=15%  Similarity=0.333  Sum_probs=36.8

Q ss_pred             hhhhhc-CCCCccchhHHHHHHHHH-hcC-CCh-HHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          328 LLAADM-NHNGFISKSEYVIFKLKE-MGK-IGE-KDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       328 l~~~~~-d~~~~~~~~e~~~~~L~~-~g~-i~~-e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +...|. +++|.++..|. ...+.. .|. +++ ++++.   -++.+|.|+||.|+-++-
T Consensus        14 F~~fd~~~~~g~i~~~EL-k~ll~~elg~~ls~~~~v~~---mi~~~D~d~DG~I~F~EF   69 (89)
T cd05022          14 FHKASVKGGKESLTASEF-QELLTQQLPHLLKDVEGLEE---KMKNLDVNQDSKLSFEEF   69 (89)
T ss_pred             HHHHhCCCCCCeECHHHH-HHHHHHHhhhhccCHHHHHH---HHHHhCCCCCCCCcHHHH
Confidence            344566 88899998884 445555 554 666 56554   467789999999998874

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=83.92  E-value=2.3  Score=33.32  Aligned_cols=46  Identities=17%  Similarity=0.341  Sum_probs=33.3

Q ss_pred             CCCccchhHHHHHHHHH----hcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          335 HNGFISKSEYVIFKLKE----MGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       335 ~~~~~~~~e~~~~~L~~----~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++|.++..|.. ..+..    ..+.+++++.++   ++++|.|++|.|+.+|.+
T Consensus        25 ~~g~Is~~EL~-~~l~~~~~lg~k~t~~ev~~m---~~~~D~d~dG~Idf~EFv   74 (88)
T cd05029          25 DKNTLSKKELK-ELIQKELTIGSKLQDAEIAKL---MEDLDRNKDQEVNFQEYV   74 (88)
T ss_pred             CCCEECHHHHH-HHHHHHHhcCCCCCHHHHHHH---HHHhcCCCCCCCcHHHHH
Confidence            37788888753 44432    345788888876   556699999999998864

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>PTZ00183 centrin; Provisional

Probab=83.83  E-value=2.1  Score=36.37  Aligned_cols=52  Identities=25%  Similarity=0.386  Sum_probs=37.2

Q ss_pred             hhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+++|.++..+|+....... ....+   ..+...|+..|.+++|.|+..|+.
T Consensus        61 ~~d~~~~g~i~~~eF~~~~~~~~~~~~~~---~~l~~~F~~~D~~~~G~i~~~e~~  113 (158)
T PTZ00183         61 DVDKDGSGKIDFEEFLDIMTKKLGERDPR---EEILKAFRLFDDDKTGKISLKNLK  113 (158)
T ss_pred             HhCCCCCCcEeHHHHHHHHHHHhcCCCcH---HHHHHHHHHhCCCCCCcCcHHHHH
Confidence            45678899999998876543322 22233   345677899999999999999874

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=83.73  E-value=1.8  Score=36.01  Aligned_cols=50  Identities=24%  Similarity=0.258  Sum_probs=33.4

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .+...|.|+||.++..|-....   .+ -.+.-+   .+-|+..|.|+||.||.++-
T Consensus        53 ~F~~lD~d~DG~Ls~~EL~~~~---l~-~~e~~~---~~f~~~~D~n~Dg~IS~~Ef  102 (116)
T cd00252          53 MFNQLDGNYDGKLSHHELAPIR---LD-PNEHCI---KPFFESCDLDKDGSISLDEW  102 (116)
T ss_pred             HHHHHCCCCCCcCCHHHHHHHH---cc-chHHHH---HHHHHHHCCCCCCCCCHHHH
Confidence            4456889999999988844222   11 112223   34567779999999999873

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>TIGR00934 2a38euk potassium uptake protein, Trk family

Probab=83.25  E-value=4.6  Score=44.05  Aligned_cols=64  Identities=19%  Similarity=0.156  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhc-------C----CcccceeeeEeeeeccccCCC--ccCCcCcchhhHHHHHHHHHH
Q 016527          230 LALGVVVLCIAIGALILFFLED-------L----DWLDSFYLSVMSVTTVGYGDR--AFKTLPGRFFAAIWLLFSTLM  294 (388)
Q Consensus       230 ~~~~~~~~~i~~g~~~~~~~e~-------~----s~~da~y~~~iT~tTVGyGDi--~p~t~~gr~~~~~~~l~G~~~  294 (388)
                      +++..++++++++.++|...|-       .    -+.+|++-++.+ =|-||.-+  .--+++..++.+++|++|..=
T Consensus       586 ill~tt~iL~~ig~ilf~lLE~nn~tl~~lp~g~Ril~aLFQSVst-RTAGFntVdls~Lspatlvl~iiLMyIGa~P  662 (800)
T TIGR00934       586 WLFFTLVGLNAIDLILFIILDWGSSVVDGLSKGIKVLNGLFQSVST-RTAGFTVVDLSQLHPAIQVSYMLMMYVSVLP  662 (800)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHhccc-ccccccccchHhcChhHHHHHHHHHHhccCC
Confidence            4555666677888888888872       1    256777777664 56666532  223456678888888888543

The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=83.07  E-value=0.97  Score=39.24  Aligned_cols=30  Identities=30%  Similarity=0.427  Sum_probs=27.9

Q ss_pred             ChHHHHHHHHHhhhcCCCCCCccChhhhcc
Q 016527          356 GEKDISQICNQFNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       356 ~~e~i~~i~~~F~~ld~~~~g~l~~~d~~~  385 (388)
                      ++..|.++++.|.-+|+|+||.|+..||-.
T Consensus        27 ~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d   56 (171)
T KOG0031|consen   27 DQSQIQEFKEAFNLMDQNRDGFIDKEDLRD   56 (171)
T ss_pred             hHHHHHHHHHHHHHHhccCCCcccHHHHHH
Confidence            688999999999999999999999999853

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=82.83  E-value=3.6  Score=32.27  Aligned_cols=53  Identities=11%  Similarity=0.233  Sum_probs=36.7

Q ss_pred             hhhhh-cCCCC-ccchhHHHHHHHHH-----hcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAAD-MNHNG-FISKSEYVIFKLKE-----MGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~-~d~~~-~~~~~e~~~~~L~~-----~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...| .|.+| .++..| +...|..     .|. .+++++.++.+   ++|.|++|.++.++.+
T Consensus        14 F~~fD~~dgdG~~I~~~e-L~~ll~~~~~~~lg~~~~~~~v~~~i~---~~D~n~dG~v~f~eF~   74 (88)
T cd05027          14 FHQYSGREGDKHKLKKSE-LKELINNELSHFLEEIKEQEVVDKVME---TLDSDGDGECDFQEFM   74 (88)
T ss_pred             HHHhcccCCCcCEECHHH-HHHHHHHHhHHHhcCCCCHHHHHHHHH---HhCCCCCCcCcHHHHH
Confidence            34455 57788 488776 4556665     454 46677776665   5599999999998864

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=82.69  E-value=2.3  Score=37.22  Aligned_cols=19  Identities=26%  Similarity=0.464  Sum_probs=8.8

Q ss_pred             HHHhhhcCCCCCCccChhh
Q 016527          364 CNQFNRLDPNNCGKITLPD  382 (388)
Q Consensus       364 ~~~F~~ld~~~~g~l~~~d  382 (388)
                      .+.|+..|.|++|+|++.+
T Consensus       109 ~~afrl~D~D~~Gkis~~~  127 (172)
T KOG0028|consen  109 KKAFRLFDDDKTGKISQRN  127 (172)
T ss_pred             HHHHHcccccCCCCcCHHH
Confidence            3444444444444444443

>smart00027 EH Eps15 homology domain

Probab=82.68  E-value=3.3  Score=32.71  Aligned_cols=52  Identities=19%  Similarity=0.277  Sum_probs=37.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..+. ...+...| .+++++.++.+   ..|.+++|.|+.++.+
T Consensus        16 F~~~D~d~~G~Is~~el-~~~l~~~~-~~~~ev~~i~~---~~d~~~~g~I~~~eF~   67 (96)
T smart00027       16 FRSLDKNQDGTVTGAQA-KPILLKSG-LPQTLLAKIWN---LADIDNDGELDKDEFA   67 (96)
T ss_pred             HHHhCCCCCCeEeHHHH-HHHHHHcC-CCHHHHHHHHH---HhcCCCCCCcCHHHHH
Confidence            44567888999987774 44455554 78887776655   5688999999988754

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>PTZ00184 calmodulin; Provisional

Probab=82.25  E-value=2.6  Score=35.30  Aligned_cols=53  Identities=23%  Similarity=0.488  Sum_probs=38.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..++.. .+...| .++++++..+   |+..|.+++|.|+.++..
T Consensus        90 F~~~D~~~~g~i~~~e~~~-~l~~~~~~~~~~~~~~~---~~~~d~~~~g~i~~~ef~  143 (149)
T PTZ00184         90 FKVFDRDGNGFISAAELRH-VMTNLGEKLTDEEVDEM---IREADVDGDGQINYEEFV  143 (149)
T ss_pred             HHhhCCCCCCeEeHHHHHH-HHHHHCCCCCHHHHHHH---HHhcCCCCCCcCcHHHHH
Confidence            4556788899999877643 344444 4677777765   566788999999988764

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=82.25  E-value=3.2  Score=36.10  Aligned_cols=58  Identities=33%  Similarity=0.507  Sum_probs=39.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCC-hHHHH------------------------------HHHHHhhhcCCCCC
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIG-EKDIS------------------------------QICNQFNRLDPNNC  375 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~-~e~i~------------------------------~i~~~F~~ld~~~~  375 (388)
                      .+..+|.+.||++++.+ +..++..+|++. +++++                              .|...|.-.|.+++
T Consensus        37 AF~~mDqnrDG~IdkeD-L~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~  115 (171)
T KOG0031|consen   37 AFNLMDQNRDGFIDKED-LRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGS  115 (171)
T ss_pred             HHHHHhccCCCcccHHH-HHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCC
Confidence            34456777788877665 455666555543 33333                              45788999999999


Q ss_pred             CccChhhhcc
Q 016527          376 GKITLPDLLE  385 (388)
Q Consensus       376 g~l~~~d~~~  385 (388)
                      |+|+.+.|-+
T Consensus       116 G~I~~d~lre  125 (171)
T KOG0031|consen  116 GKIDEDYLRE  125 (171)
T ss_pred             CccCHHHHHH
Confidence            9999887643

>KOG1054 consensus Glutamate-gated AMPA-type ion channel receptor subunit GluR2 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]

Probab=81.96  E-value=0.83  Score=47.54  Aligned_cols=84  Identities=14%  Similarity=0.323  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHhhhhhhcc-------------cccC---CCCCCCcchhhhheeeeeecccccccccCCcccchhhhh
Q 016527          104 QAFVLLSIYLFVGVVIYSFNT-------------DHFS---GVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACL  167 (388)
Q Consensus       104 ~~~i~~~~~i~~g~~i~~~~~-------------~~~~---~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~  167 (388)
                      ++..+++.|+.+++++|...+             +.+.   .....+.++++||+.-.+.--| .|+.|.+..||+....
T Consensus       549 IWm~ivfaYiGVSvvlFLVSrFSPYEwh~Ee~~rg~~t~~~~~NeFgifNsLWFsLgAFMQQG-~DI~PRslSGRIvggv  627 (897)
T KOG1054|consen  549 IWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFERGRFTPSDPPNEFGIFNSLWFSLGAFMQQG-CDISPRSLSGRIVGGV  627 (897)
T ss_pred             HHHHHHHHHhcceEEEEEEeccCchheeccccccCCCCCCCCCccchhhHHHHHHHHHHHhcC-CCCCccccccceeccc
Confidence            344456677777888877532             1111   1223467899999988777766 5899999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHH
Q 016527          168 FVLVGFGFIDILLSGVVNYVL  188 (388)
Q Consensus       168 ~~l~Gi~~~~~~~~~~~~~~~  188 (388)
                      |-++-+.+++...+++..++.
T Consensus       628 WWFFTlIIiSSYTANLAAFLT  648 (897)
T KOG1054|consen  628 WWFFTLIIISSYTANLAAFLT  648 (897)
T ss_pred             hhhhhhhhhhhhhhHHHHHHh
Confidence            999999999888888888774

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=81.87  E-value=3.4  Score=32.64  Aligned_cols=48  Identities=19%  Similarity=0.261  Sum_probs=31.6

Q ss_pred             cCCCC-ccchhHHHHHHHHH-h-----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNG-FISKSEYVIFKLKE-M-----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~-~~~~~e~~~~~L~~-~-----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+| .++..|. ...+.. .     +..+++++.++.   +++|.|++|.|+..+.+
T Consensus        22 ~dgdg~~Is~~EL-~~ll~~~~~~~~~~~~~~~~v~~i~---~elD~n~dG~Idf~EF~   76 (93)
T cd05026          22 KEGDRYKLSKGEL-KELLQRELTDFLSSQKDPMLVDKIM---NDLDSNKDNEVDFNEFV   76 (93)
T ss_pred             cCCCCCEECHHHH-HHHHHHHhHHhcccccCHHHHHHHH---HHhCCCCCCCCCHHHHH
Confidence            56787 4888874 344433 2     334566666555   55588999999988754

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>PTZ00184 calmodulin; Provisional

Probab=81.70  E-value=2.9  Score=34.94  Aligned_cols=53  Identities=23%  Similarity=0.386  Sum_probs=36.9

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..+.+.+|.++..+|+............+  ..+...|+..|.+++|.|+..|+.
T Consensus        55 ~~d~~~~g~i~~~ef~~~l~~~~~~~~~~--~~~~~~F~~~D~~~~g~i~~~e~~  107 (149)
T PTZ00184         55 EVDADGNGTIDFPEFLTLMARKMKDTDSE--EEIKEAFKVFDRDGNGFISAAELR  107 (149)
T ss_pred             hcCcCCCCcCcHHHHHHHHHHhccCCcHH--HHHHHHHHhhCCCCCCeEeHHHHH
Confidence            34667788899888876544333222222  345677999999999999999874

>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]

Probab=81.15  E-value=1  Score=47.25  Aligned_cols=55  Identities=18%  Similarity=0.344  Sum_probs=49.7

Q ss_pred             CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARI  307 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~  307 (388)
                      ++..|+||+--.+..-|-|+-.|.+...|+++++|+=+.++++|..+++++..+.
T Consensus       613 nlssAmWF~WGVLLNSGigEgtPRSfSARvLGmVWaGFaMIiVASYTANLAAFLV  667 (993)
T KOG4440|consen  613 NLSSAMWFSWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLV  667 (993)
T ss_pred             chhhhHHHHhHhhhccccCCCCCcchhHHHHHHHHhhhheeeehhhhhhhhhhee
Confidence            7788999998888999999999999999999999999999999999999886543

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=80.01  E-value=3.7  Score=35.31  Aligned_cols=55  Identities=20%  Similarity=0.329  Sum_probs=40.5

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +.++..|.|.+|+++..|....+.....+.+.+++..   -+++.|.|+||.++-++-
T Consensus        89 eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~---mi~~~d~d~dg~i~f~ef  143 (151)
T KOG0027|consen   89 EAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKE---MIREVDVDGDGKVNFEEF  143 (151)
T ss_pred             HHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHH---HHHhcCCCCCCeEeHHHH
Confidence            3556789999999999886555555567777666664   456667899999977553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	388
4h33_A	137	Crystal Structure Of A Voltage-gated K+ Channel Por		1e-07
3ouf_A	97	Structure Of A K+ Selective Nak Mutant Length = 97		5e-07
3tcu_A	97	Crystal Structure Of Nak2k Channel D68e Mutant Leng		2e-06
3tet_A	97	Crystal Structure Of Nak2k Channel Y66f Mutant Leng		2e-06
3t4d_A	97	Crystal Structure Of Nak2k Channel Y55f Mutant Leng		2e-06
3t4z_A	97	Crystal Structure Of Nak2k Channel Y55w Mutant Leng		2e-06
3t1c_A	97	Crystal Structure Of Nak Channel D66y Mutant Length		2e-06
3vou_A	148	The Crystal Structure Of Nak-Navsulp Chimera Channe		7e-06
4hyo_A	91	Crystal Structure Of Mthk Pore Length = 91		7e-06
3ldd_A	82	High Resolution Open Mthk Pore Structure Crystalliz		9e-06
1lnq_A	336	Crystal Structure Of Mthk At 3.3 A Length = 336		9e-06
3t2m_A	97	Crystal Structure Of Nak Channel N68d Mutant Length		9e-06
3r65_A	82	Mthk Channel Pore E92q Mutant Length = 82		1e-05
3ldc_A	82	High Resolution Open Mthk Pore Structure Crystalliz		1e-05
2q67_A	114	Crystal Structure Of Nak Channel D66a Mutant Length		2e-05
2q69_A	114	Crystal Structure Of Nak Channel D66n Mutant Length		2e-05
2q6a_A	114	Crystal Structure Of Nak Channel D66e Mutant Length		2e-05
2ahy_A	110	Na+ Complex Of The Nak Channel Length = 110		3e-05
3e83_A	96	Crystal Structure Of The The Open Nak Channel Pore		3e-05
2q68_A	114	Crystal Structure Of Nak Channel D66a, S70e Double		3e-05
3rbz_A	340	Mthk Channel, Ca2+-Bound Length = 340		3e-05
3ous_A	82	Mthk Channel Pore T59a Mutant Length = 82		4e-05
2a0l_A	241	Crystal Structure Of Kvap-33h1 Fv Complex Length =		4e-05
3um7_A	309	Crystal Structure Of The Human Two Pore Domain K+ I		6e-05
3lnm_B	514	F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Chan		8e-05
1orq_C	223	X-Ray Structure Of A Voltage-Dependent Potassium Ch		8e-05
2r9r_B	514	Shaker Family Voltage Dependent Potassium Channel (		9e-05
3lut_B	499	A Structural Model For The Full-Length Shaker Potas		1e-04
2a79_B	499	Mammalian Shaker Kv1.2 Potassium Channel- Beta Subu		1e-04
3ukm_A	280	Crystal Structure Of The Human Two Pore Domain Pota		1e-04

>pdb|4H33|A Chain A, Crystal Structure Of A Voltage-gated K+ Channel Pore Module In A Closed State In Lipid Membranes, Tetragonal Crystal Form Length = 137

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 106 FVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFA 165
           FVLL I + V +V      +++         DAL++ IVT  T+GYGDI P+TP  ++ A
Sbjct: 23  FVLLVIIIPVPMVFIEPEINNYP--------DALWWAIVTATTVGYGDIVPVTPIGRILA 74
Query: 166 CLFVLVGFGFIDILLSGVVNY 186
            + +L G  FI ++ S + N+
Sbjct: 75  SIMMLFGIAFIGMITSTITNF 95

>pdb|3OUF|A Chain A, Structure Of A K+ Selective Nak Mutant Length = 97

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+GYGD +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALYFSVVTLTTVGYGDFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3TCU|A Chain A, Crystal Structure Of Nak2k Channel D68e Mutant Length = 97

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+GYG+ +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALYFSVVTLTTVGYGEFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3TET|A Chain A, Crystal Structure Of Nak2k Channel Y66f Mutant Length = 97

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G+GD +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALYFSVVTLTTVGFGDFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3T4D|A Chain A, Crystal Structure Of Nak2k Channel Y55f Mutant Length = 97

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DAL+F +VT+ T+GYGD +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALFFSVVTLTTVGYGDFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3T4Z|A Chain A, Crystal Structure Of Nak2k Channel Y55w Mutant Length = 97

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DAL+F +VT+ T+GYGD +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALWFSVVTLTTVGYGDFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3T1C|A Chain A, Crystal Structure Of Nak Channel D66y Mutant Length = 97

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+GYG+ +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALYFSVVTLTTVGYGNFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3VOU|A Chain A, The Crystal Structure Of Nak-Navsulp Chimera Channel Length = 148

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 106 FVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFA 165
           FVL  + L  G + YS        VE    +DALYF +VT+ T+G G+ +P T   KVF 
Sbjct: 31  FVLTFLTLTSGTIFYS-------TVEGLRPLDALYFSVVTLTTVGDGNFSPQTDFGKVFT 83
Query: 166 CLFVLVGFGFI 176
            L++ +G G +
Sbjct: 84  ILYIFIGIGLV 94

>pdb|4HYO|A Chain A, Crystal Structure Of Mthk Pore Length = 91

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+ T+GYGD +P TP    F C  ++
Sbjct: 14  LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIV 71
Query: 171 VGFGFIDILLSGVVNYVLD 189
           +G G   + +  ++ ++++
Sbjct: 72  LGIGTFAVAVERLLEFLIN 90

>pdb|3LDD|A Chain A, High Resolution Open Mthk Pore Structure Crystallized In 100 Mm K+ And Further Soaked In 99 Mm Na+1 MM K+ Length = 82

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+ T+GYGD +P TP    F C  ++
Sbjct: 7   LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIATVGYGDYSPRTPLGMYFTCTLIV 64
Query: 171 VGFGFIDILLSGVVNYVL 188
           +G G   + +  ++ +++
Sbjct: 65  LGIGTFAVAVERLLEFLI 82

>pdb|1LNQ|A Chain A, Crystal Structure Of Mthk At 3.3 A Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+ T+GYGD +P TP    F    ++
Sbjct: 24  LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIV 81
Query: 171 VGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGR 221
           +G G   + +  ++ ++++ +E M L G               ++DVAK R
Sbjct: 82  LGIGTFAVAVERLLEFLIN-REQMKLMG---------------LIDVAKSR 116

>pdb|3T2M|A Chain A, Crystal Structure Of Nak Channel N68d Mutant Length = 97

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G GD +P T   K+F  L++ +G G +
Sbjct: 21  GTIFYSTVEGLRPIDALYFSVVTLTTVGDGDFSPQTDFGKIFTILYIFIGIGLV 74

>pdb|3R65|A Chain A, Mthk Channel Pore E92q Mutant Length = 82

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+ T+GYGD +P TP    F C  ++
Sbjct: 7   LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIV 64
Query: 171 VGFGFIDILLSGVVNYVL 188
           +G G   + +  ++ +++
Sbjct: 65  LGIGTFAVAVQRLLEFLI 82

>pdb|3LDC|A Chain A, High Resolution Open Mthk Pore Structure Crystallized In 100 Mm K+ Length = 82

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+ T+GYGD +P TP    F C  ++
Sbjct: 7   LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIV 64
Query: 171 VGFGFIDILLSGVVNYVL 188
           +G G   + +  ++ +++
Sbjct: 65  LGIGTFAVAVERLLEFLI 82

>pdb|2Q67|A Chain A, Crystal Structure Of Nak Channel D66a Mutant Length = 114

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G G+ +P T   K+F  L++ +G G +
Sbjct: 38  GTIFYSTVEGLRPIDALYFSVVTLTTVGAGNFSPQTDFGKIFTILYIFIGIGLV 91

>pdb|2Q69|A Chain A, Crystal Structure Of Nak Channel D66n Mutant Length = 114

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G G+ +P T   K+F  L++ +G G +
Sbjct: 38  GTIFYSTVEGLRPIDALYFSVVTLTTVGNGNFSPQTDFGKIFTILYIFIGIGLV 91

>pdb|2Q6A|A Chain A, Crystal Structure Of Nak Channel D66e Mutant Length = 114

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G G+ +P T   K+F  L++ +G G +
Sbjct: 38  GTIFYSTVEGLRPIDALYFSVVTLTTVGEGNFSPQTDFGKIFTILYIFIGIGLV 91

>pdb|2AHY|A Chain A, Na+ Complex Of The Nak Channel Length = 110

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G G+ +P T   K+F  L++ +G G +
Sbjct: 38  GTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDFGKIFTILYIFIGIGLV 91

>pdb|3E83|A Chain A, Crystal Structure Of The The Open Nak Channel Pore Length = 96

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G G+ +P T   K+F  L++ +G G +
Sbjct: 20  GTIFYSTVEGLRPIDALYFSVVTLTTVGDGNFSPQTDFGKIFTILYIFIGIGLV 73

>pdb|2Q68|A Chain A, Crystal Structure Of Nak Channel D66a, S70e Double Mutants Length = 114

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 123 NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFI 176
            T  +S VE    +DALYF +VT+ T+G G+  P T   K+F  L++ +G G +
Sbjct: 38  GTIFYSTVEGLRPIDALYFSVVTLTTVGAGNFEPQTDFGKIFTILYIFIGIGLV 91

>pdb|3RBZ|A Chain A, Mthk Channel, Ca2+-Bound Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+ T+GYGD +P TP    F    ++
Sbjct: 24  LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIV 81
Query: 171 VGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGR 221
           +G     + ++ ++ ++++ +E M L G               ++DVAK R
Sbjct: 82  LGIATFAVAVARLLTFLIN-REQMKLIG---------------LIDVAKSR 116

>pdb|3OUS|A Chain A, Mthk Channel Pore T59a Mutant Length = 82

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 111 IYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVL 170
           + L + V+IY     HF   E+  V  +LY+  VT+  +GYGD +P TP    F C  ++
Sbjct: 7   LLLVLAVIIYGTAGFHFIEGESWTV--SLYWTFVTIAAVGYGDYSPHTPLGMYFTCTLIV 64
Query: 171 VGFGFIDILLSGVVNYVL 188
           +G G   + +  ++ +++
Sbjct: 65  LGIGTFAVAVERLLEFLI 82

>pdb|2A0L|A Chain A, Crystal Structure Of Kvap-33h1 Fv Complex Length = 241

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 135 VVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVN 185
           V DAL++ +VT  T+GYGD+ P TP  KV     +L G   + +L+  V N
Sbjct: 178 VFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSN 228

>pdb|3UM7|A Chain A, Crystal Structure Of The Human Two Pore Domain K+ Ion Channel Traak (K2p4.1) Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 137 DALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMIL 196
            A +F    + TIGYG++A  T A ++F   + LVG     ILL+GV             
Sbjct: 118 SAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGV------------- 164
Query: 197 TGIQMG-KVKEGFSARDYIV---DVAKGRMRIRXXXXXXXXXXXXCIAIGALILFFLEDL 252
            G ++G  ++ G    + I     V    +R+              +     +  ++ED 
Sbjct: 165 -GDRLGSSLRHGIGHIEAIFLKWHVPPELVRVLSAMLFLLIGCLLFVLTPTFVFCYMEDW 223
Query: 253 DWLDSFYLSVMSVTTVGYGD 272
             L++ Y  ++++TTVG+GD
Sbjct: 224 SKLEAIYFVIVTLTTVGFGD 243

>pdb|3LNM|B Chain B, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel Length = 514

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 108 LLSIYLFVGVVIYSFNTDHFSGVETH-----PVVDALYFCIVTMCTIGYGDIAPLTPATK 162
           LL  +LF+GV+++S +  +F+  +        + DA ++ +V+M T+GYGD+ P T   K
Sbjct: 345 LLIFFLFIGVILFS-SAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGK 403
Query: 163 VFACLFVLVG 172
           +   L  + G
Sbjct: 404 IVGSLCAIAG 413

>pdb|1ORQ|C Chain C, X-Ray Structure Of A Voltage-Dependent Potassium Channel In Complex With An Fab Length = 223

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 135 VVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVN 185
           V DAL++ +VT  T+GYGD+ P TP  KV     +L G   + +L+  V N
Sbjct: 166 VFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSN 216

>pdb|2R9R|B Chain B, Shaker Family Voltage Dependent Potassium Channel (Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With Beta Subunit Length = 514

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 108 LLSIYLFVGVVIYSFNTDHFSGVETH-----PVVDALYFCIVTMCTIGYGDIAPLTPATK 162
           LL  +LF+GV+++S +  +F+  +        + DA ++ +V+M T+GYGD+ P T   K
Sbjct: 345 LLIFFLFIGVILFS-SAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGK 403
Query: 163 VFACLFVLVG 172
           +   L  + G
Sbjct: 404 IVGSLCAIAG 413

>pdb|3LUT|B Chain B, A Structural Model For The Full-Length Shaker Potassium Channel Kv1.2 Length = 499

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 108 LLSIYLFVGVVIYSFNTDHFSGVETH-----PVVDALYFCIVTMCTIGYGDIAPLTPATK 162
           LL  +LF+GV+++S +  +F+  +        + DA ++ +V+M T+GYGD+ P T   K
Sbjct: 330 LLIFFLFIGVILFS-SAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGK 388
Query: 163 VFACLFVLVG 172
           +   L  + G
Sbjct: 389 IVGSLCAIAG 398

>pdb|2A79|B Chain B, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit Complex Length = 499

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 108 LLSIYLFVGVVIYSFNTDHFSGVETH-----PVVDALYFCIVTMCTIGYGDIAPLTPATK 162
           LL  +LF+GV+++S +  +F+  +        + DA ++ +V+M T+GYGD+ P T   K
Sbjct: 330 LLIFFLFIGVILFS-SAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGK 388
Query: 163 VFACLFVLVG 172
           +   L  + G
Sbjct: 389 IVGSLCAIAG 398

>pdb|3UKM|A Chain A, Crystal Structure Of The Human Two Pore Domain Potassium Ion Channel K2p1 (Twik-1) Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 128 SGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYV 187
           SG        AL+F    + T GYG   PL+   K F  ++ ++G  F  + L+ VV   
Sbjct: 87  SGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQ-- 144
Query: 188 LDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRXXXXXXXXXXXXCIAIGALILF 247
             +  ++    +    ++ GFS         K  + I                I A +  
Sbjct: 145 -RITVHVTRRPVLYFHIRWGFS---------KQVVAIVHAVLLGFVTVSCFFFIPAAVFS 194
Query: 248 FLEDLDW--LDSFYLSVMSVTTVGYGD 272
            LED DW  L+SFY   +S++T+G GD
Sbjct: 195 VLED-DWNFLESFYFCFISLSTIGLGD 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
3um7_A	309	Potassium channel subfamily K member 4; potassium	1e-22
3ukm_A	280	Potassium channel subfamily K member 1; membrane p	5e-22
3vou_A	148	ION transport 2 domain protein, voltage-gated SOD	7e-21
3vou_A	148	ION transport 2 domain protein, voltage-gated SOD	5e-16
2q67_A	114	Potassium channel protein; inverted teepee, helix	2e-20
2q67_A	114	Potassium channel protein; inverted teepee, helix	4e-16
3ouf_A	97	Potassium channel protein; ION channel, membrane,	4e-20
3ouf_A	97	Potassium channel protein; ION channel, membrane,	4e-17
3ldc_A	82	Calcium-gated potassium channel MTHK; transmembran	7e-20
3ldc_A	82	Calcium-gated potassium channel MTHK; transmembran	5e-15
1lnq_A	336	MTHK channels, potassium channel related protein;	8e-15
1lnq_A	336	MTHK channels, potassium channel related protein;	6e-14
3eff_K	139	Voltage-gated potassium channel; FULL length KCSA,	1e-12
3eff_K	139	Voltage-gated potassium channel; FULL length KCSA,	5e-08
2a9h_A	155	Voltage-gated potassium channel; potassium channel	4e-12
2a9h_A	155	Voltage-gated potassium channel; potassium channel	8e-08
3pjs_K	166	KCSA, voltage-gated potassium channel; ION channel	5e-12
3pjs_K	166	KCSA, voltage-gated potassium channel; ION channel	2e-07
2ih3_C	122	Voltage-gated potassium channel; ION channel D-ami	8e-12
2ih3_C	122	Voltage-gated potassium channel; ION channel D-ami	4e-07
1orq_C	223	Potassium channel; voltage-dependent, KVAP, FAB co	4e-11
1orq_C	223	Potassium channel; voltage-dependent, KVAP, FAB co	4e-06
2k1e_A	103	Water soluble analogue of potassium channel, KCSA;	7e-11
2k1e_A	103	Water soluble analogue of potassium channel, KCSA;	3e-08
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	1e-10
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	4e-07
1xl4_A	301	Inward rectifier potassium channel; integral membr	4e-10
1xl4_A	301	Inward rectifier potassium channel; integral membr	1e-08
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	5e-10
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	9e-10
2qks_A	321	KIR3.1-prokaryotic KIR channel chimera; G-protein	4e-08
2qks_A	321	KIR3.1-prokaryotic KIR channel chimera; G-protein	3e-06
1p7b_A	333	Integral membrane channel and cytosolic domains; t	4e-08
1p7b_A	333	Integral membrane channel and cytosolic domains; t	4e-07
3sya_A	340	G protein-activated inward rectifier potassium CH;	4e-05
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	5e-04

>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens} Length = 309

 Score = 96.4 bits (239), Expect = 1e-22
 Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 16/211 (7%)

Query: 118 VIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFID 177
                 +   S      +  A +F    + TIGYG++A  T A ++F   + LVG     
Sbjct: 99  ADPETQSTSQSSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFG 158

Query: 178 ILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVL 237
           ILL+GV + +     + I              A      V    +R+   +   L   +L
Sbjct: 159 ILLAGVGDRLGSSLRHGIGH----------IEAIFLKWHVPPELVRVLSAMLFLLIGCLL 208

Query: 238 CIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLP------GRFFAAIWLLFS 291
            +     +  ++ED   L++ Y  ++++TTVG+GD      P       +     W+L  
Sbjct: 209 FVLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPAYQPLVWFWILLG 268

Query: 292 TLMVARAFLYLAEARIDKRHRRIAKWVLQRE 322
               A     +         R  A+      
Sbjct: 269 LAYFASVLTTIGNWLRVVSRRTRAEMGGLTA 299

>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens} Length = 280

 Score = 93.7 bits (232), Expect = 5e-22
 Identities = 42/201 (20%), Positives = 71/201 (35%), Gaps = 20/201 (9%)

Query: 122 FNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLS 181
                 SG        AL+F    + T GYG   PL+   K F  ++ ++G  F  + L+
Sbjct: 81  SVLSQASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLT 140

Query: 182 GVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAI 241
            VV  +        +    +                +K  + I   V L    V     I
Sbjct: 141 AVVQRITVHVTRRPVLYFHI------------RWGFSKQVVAIVHAVLLGFVTVSCFFFI 188

Query: 242 GALILFFLE-DLDWLDSFYLSVMSVTTVGYGDRAFKTLPG-------RFFAAIWLLFSTL 293
            A +   LE D ++L+SFY   +S++T+G GD               +     +LL   +
Sbjct: 189 PAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLI 248

Query: 294 MVARAFLYLAEARIDKRHRRI 314
            +        E    K+ R++
Sbjct: 249 AMLVVLETFCELHELKKFRKM 269

>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis} Length = 148

 Score = 87.3 bits (216), Expect = 7e-21
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 17/128 (13%)

Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
             +  FVL  + L  G + YS        VE    +DALYF +VT+ T+G G+ +P T  
Sbjct: 26  EFQVLFVLTFLTLTSGTIFYST-------VEGLRPLDALYFSVVTLTTVGDGNFSPQTDF 78

Query: 161 TKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSARDYIVDVAKG 220
            KVF  L++ +G G +   +  +    +++Q   IL+  +            Y ++V + 
Sbjct: 79  GKVFTILYIFIGIGLVFGFIHKL---AVNVQLPSILSNRKKET-------DAYRLEVMEK 128

Query: 221 RMRIRLKV 228
              I  K+
Sbjct: 129 LEAIEKKL 136

>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis} Length = 148

 Score = 73.8 bits (181), Expect = 5e-16
 Identities = 22/127 (17%), Positives = 50/127 (39%), Gaps = 7/127 (5%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
           R     +  +   +  L +  G +    +E L  LD+ Y SV+++TTVG G+ + +T  G
Sbjct: 20  RAWKDKEFQVLFVLTFLTLTSGTIFYSTVEGLRPLDALYFSVVTLTTVGDGNFSPQTDFG 79

Query: 281 RFFAAIWLLF-------STLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADM 333
           + F  +++             +A      +     K+     +  +  ++   +   A+ 
Sbjct: 80  KVFTILYIFIGIGLVFGFIHKLAVNVQLPSILSNRKKETDAYRLEVMEKLEAIEKKLAEH 139

Query: 334 NHNGFIS 340
           +  G + 
Sbjct: 140 SRQGSLV 146

>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A Length = 114

 Score = 84.9 bits (210), Expect = 2e-20
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
             +  FVL  + L  G + YS        VE    +DALYF +VT+ T+G G+ +P T  
Sbjct: 23  EFQVLFVLTILTLISGTIFYST-------VEGLRPIDALYFSVVTLTTVGAGNFSPQTDF 75

Query: 161 TKVFACLFVLVGFGFIDILLSGVVNYV 187
            K+F  L++ +G G +   +  +   V
Sbjct: 76  GKIFTILYIFIGIGLVFGFIHKLAVNV 102

>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A Length = 114

 Score = 73.0 bits (179), Expect = 4e-16
 Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
           R     +  +   + +L +  G +    +E L  +D+ Y SV+++TTVG G+ + +T  G
Sbjct: 17  RAWKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGAGNFSPQTDFG 76

Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQR 321
           + F  +++     +V      LA          I   ++ R
Sbjct: 77  KIFTILYIFIGIGLVFGFIHKLAVNVQL---PSILSNLVPR 114

>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A Length = 97

 Score = 83.7 bits (207), Expect = 4e-20
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
             +  FVL  + L  G + YS        VE    +DALYF +VT+ T+GYGD +P T  
Sbjct: 6   EFQVLFVLTILTLISGTIFYST-------VEGLRPIDALYFSVVTLTTVGYGDFSPQTDF 58

Query: 161 TKVFACLFVLVGFGFIDILLSGVVNYVL 188
            K+F  L++ +G G +   +  +   V 
Sbjct: 59  GKIFTILYIFIGIGLVFGFIHKLAVNVQ 86

>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A Length = 97

 Score = 75.2 bits (185), Expect = 4e-17
 Identities = 22/100 (22%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 222 MRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGR 281
           M    +  +   + +L +  G +    +E L  +D+ Y SV+++TTVGYGD + +T  G+
Sbjct: 1   MAKDKEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGYGDFSPQTDFGK 60

Query: 282 FFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQR 321
            F  +++      +   F ++ +  ++ +   I   ++ R
Sbjct: 61  IFTILYIFIG---IGLVFGFIHKLAVNVQLPSILSNLVPR 97

>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 3r65_A 3ous_A 3ldd_A Length = 82

 Score = 82.4 bits (204), Expect = 7e-20
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 102 IRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPAT 161
             +  +L+   +  G   + F       +E      +LY+  VT+ T+GYGD +P TP  
Sbjct: 3   ATRILLLVLAVIIYGTAGFHF-------IEGESWTVSLYWTFVTIATVGYGDYSPHTPLG 55

Query: 162 KVFACLFVLVGFGFIDILLSGVVNYVL 188
             F C  +++G G   + +  ++ +++
Sbjct: 56  MYFTCTLIVLGIGTFAVAVERLLEFLI 82

>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 3r65_A 3ous_A 3ldd_A Length = 82

 Score = 68.9 bits (169), Expect = 5e-15
 Identities = 23/82 (28%), Positives = 35/82 (42%)

Query: 226 LKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAA 285
           +     L +V+  I  G     F+E   W  S Y + +++ TVGYGD +  T  G +F  
Sbjct: 1   VPATRILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPHTPLGMYFTC 60

Query: 286 IWLLFSTLMVARAFLYLAEARI 307
             ++      A A   L E  I
Sbjct: 61  TLIVLGIGTFAVAVERLLEFLI 82

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Length = 336

 Score = 74.0 bits (182), Expect = 8e-15
 Identities = 23/96 (23%), Positives = 41/96 (42%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
              +++     L +V+  I  G     F+E   W  S Y + +++ TVGYGD +  T  G
Sbjct: 13  PRVLKVPATRILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLG 72

Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAK 316
            +F    ++      A A   L E  I++   ++  
Sbjct: 73  MYFTVTLIVLGIGTFAVAVERLLEFLINREQMKLMG 108

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Length = 336

 Score = 71.3 bits (175), Expect = 6e-14
 Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 99  SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLT 158
                +  +L+   +  G   + F       +E      +LY+  VT+ T+GYGD +P T
Sbjct: 17  KVPATRILLLVLAVIIYGTAGFHF-------IEGESWTVSLYWTFVTIATVGYGDYSPST 69

Query: 159 PATKVFACLFVLVGFGFIDILLSGVVNYVLD 189
           P    F    +++G G   + +  ++ ++++
Sbjct: 70  PLGMYFTVTLIVLGIGTFAVAVERLLEFLIN 100

>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans} Length = 139

 Score = 63.8 bits (155), Expect = 1e-12
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 18/105 (17%)

Query: 103 RQAFVLLSIYLFVGVVIYSF---------NTDHFSGVETHPVVDALYFCIVTMCTIGYGD 153
            +A    ++ L + ++  S+                        AL++ + T  T+GYGD
Sbjct: 5   WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYP-----RALWWSVETATTVGYGD 59

Query: 154 IAPLTPATKVFACLFVLVGFGFI----DILLSGVVNYVLDLQENM 194
           + P+T   ++ A + ++ G          L +  V    + + + 
Sbjct: 60  LYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQERRGHF 104

>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans} Length = 139

 Score = 50.7 bits (121), Expect = 5e-08
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 7/115 (6%)

Query: 228 VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
            G A  ++V+ +  G+ +    E        + +  + + SV + TTVGYGD    TL G
Sbjct: 8   AGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWG 67

Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQREITIDDLLAADMNH 335
           R  A + ++            LA   + +   R   +V   E   ++        
Sbjct: 68  RLVAVVVMVAGITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAYTRTTRA 122

>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Length = 155

 Score = 62.5 bits (152), Expect = 4e-12
 Identities = 19/108 (17%), Positives = 47/108 (43%), Gaps = 12/108 (11%)

Query: 98  SSFIIRQAFVLLSIYLFVGVVIYSF------NTDHFSGVETHPVVDALYFCIVTMCTIGY 151
            S +  +A    ++ L + ++  S+           + + ++P  DAL++ + T  T+GY
Sbjct: 44  GSALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAALISYP--DALWWSVETATTVGY 101

Query: 152 GDIAPLTPATKVFACLFVLVGFGFI----DILLSGVVNYVLDLQENMI 195
           GD+ P+T   +  A + ++ G          + +  V    + + + +
Sbjct: 102 GDLYPVTLWGRCVAVVVMVAGITSYGLVFAAVATWFVGREQERRGHFV 149

>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Length = 155

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 10/119 (8%)

Query: 214 IVDVAKGRMRIRLK---VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVM 263
           +V +  GR    L     G A  ++V+ +  G+ +    E        + + D+ + SV 
Sbjct: 35  LVKLLLGRHGSALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVE 94

Query: 264 SVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRRIAKWVLQRE 322
           + TTVGYGD    TL GR  A + ++         F  +A   + +   R   +V   E
Sbjct: 95  TATTVGYGDLYPVTLWGRCVAVVVMVAGITSYGLVFAAVATWFVGREQERRGHFVRHSE 153

>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A Length = 166

 Score = 62.6 bits (152), Expect = 5e-12
 Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 18/110 (16%)

Query: 98  SSFIIRQAFVLLSIYLFVGVVIYSF---------NTDHFSGVETHPVVDALYFCIVTMCT 148
            S +  +A    ++ L + ++  S+                        AL++ + T  T
Sbjct: 27  GSALQWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYP-----RALWWSVETATT 81

Query: 149 IGYGDIAPLTPATKVFACLFVLVGFGFI----DILLSGVVNYVLDLQENM 194
           +GYGD+ P+T   ++ A + ++ G          L +  V      Q+  
Sbjct: 82  VGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGQEQQQQQQF 131

>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A Length = 166

 Score = 49.9 bits (119), Expect = 2e-07
 Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 17/139 (12%)

Query: 214 IVDVAKGRMRIRLK---VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVM 263
           +V +  GR    L+    G A  ++V+ +  G+ +    E        + +  + + SV 
Sbjct: 18  LVKLLLGRHGSALQWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVE 77

Query: 264 SVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVA-------RAFLYLAEARIDKRHRRIAK 316
           + TTVGYGD    TL GR  A + ++                F+   + +  +  R   K
Sbjct: 78  TATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGQEQQQQQQFVRHSEK 137

Query: 317 WVLQREITIDDLLAADMNH 335
              +        L    + 
Sbjct: 138 AAEEAYTRTTRALHERFDR 156

>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Length = 122

 Score = 60.9 bits (148), Expect = 8e-12
 Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 14/101 (13%)

Query: 98  SSFIIRQAFVLLSIYLFVGVVIYSF---------NTDHFSGVETHPVVDALYFCIVTMCT 148
            S +  +A    ++ L + ++  S+                        AL++   T  T
Sbjct: 21  GSALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYP-----RALWWACETATT 75

Query: 149 IGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLD 189
           + YGD+ P+T   ++ A + ++ G     ++ + +  + + 
Sbjct: 76  VAYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVG 116

>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Length = 122

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 10/110 (9%)

Query: 214 IVDVAKGRMRIRLK---VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVM 263
           +V +  GR    L     G A  ++V+ +  G+ +    E        + +  + + +  
Sbjct: 12  LVKLLLGRHGSALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACE 71

Query: 264 SVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKRHRR 313
           + TTV YGD    TL GR  A + ++            LA   + +   R
Sbjct: 72  TATTVAYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQER 121

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Length = 223

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 16/92 (17%)

Query: 103 RQAFVLLSIYLFVGVVIYS----------FNTDHFSGVETHPVVDALYFCIVTMCTIGYG 152
            +          +  V+Y                   V      DAL++ +VT  T+GYG
Sbjct: 129 DKIRFYHLFGAVMLTVLYGAFAIYIVEYPDPNSSIKSVF-----DALWWAVVTATTVGYG 183

Query: 153 DIAPLTPATKVFACLFVLVGFGFIDILLSGVV 184
           D+ P TP  KV     +L G   +  LL G V
Sbjct: 184 DVVPATPIGKVIGIAVMLTGISAL-TLLIGTV 214

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Length = 223

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 223 RIRLKVGLALGVVVLCIAIGALILFFLEDLDW-------LDSFYLSVMSVTTVGYGDRAF 275
             +++     G V+L +  GA  ++ +E  D         D+ + +V++ TTVGYGD   
Sbjct: 128 ADKIRFYHLFGAVMLTVLYGAFAIYIVEYPDPNSSIKSVFDALWWAVVTATTVGYGDVVP 187

Query: 276 KTLPGRFFAAIWLLFSTLMVA 296
            T  G+      +L     + 
Sbjct: 188 ATPIGKVIGIAVMLTGISALT 208

>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A Length = 103

 Score = 57.8 bits (140), Expect = 7e-11
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 105 AFVLLSIYLFVGVVIYSFNTDH-FSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKV 163
              L  +                 + + ++P  DA+++ + T  T+GYGD  P+T   + 
Sbjct: 12  EEELQKVLEEASKKAVEAERGAPGAALISYP--DAIWWSVETATTVGYGDRYPVTEEGRK 69

Query: 164 FACLFVLVGFGFI 176
            A   +  G    
Sbjct: 70  VAEQVMKAGIEVF 82

>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A Length = 103

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 7/93 (7%)

Query: 228 VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
              A   +   +   +      E        + + D+ + SV + TTVGYGDR   T  G
Sbjct: 8   AQKAEEELQKVLEEASKKAVEAERGAPGAALISYPDAIWWSVETATTVGYGDRYPVTEEG 67

Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRR 313
           R  A   +     + A     LA   + +   R
Sbjct: 68  RKVAEQVMKAGIEVFALVTAALATDFVRREEER 100

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 103 RQAFVLLSIYLFVGVVIYSF---------NTDHFSGVETHPVVDALYFCIVTMCTIGYGD 153
            +  + ++    V +   +            + F  +   P   A+++ +VT+ T GYGD
Sbjct: 126 ARNLIGVTTLFGVVLFAVALAAYVIERDIQPEKFGSI---P--QAMWWAVVTLSTTGYGD 180

Query: 154 IAPLTPATKVFACLFVLVGFGFI 176
             P + A +V A   ++ G G  
Sbjct: 181 TIPQSFAGRVLAGAVMMSGIGIF 203

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Length = 355

 Score = 50.2 bits (120), Expect = 4e-07
 Identities = 29/260 (11%), Positives = 71/260 (27%), Gaps = 35/260 (13%)

Query: 89  SQVPKPKSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALY----FCIV 144
           S +P  +  +            +                    T P +          ++
Sbjct: 2   SVLPFLRIYAPLNA--VLAAPGLLAVA--------------ALTIPDMSGRSRLALAALL 45

Query: 145 TMCTIGYGDIAPLTPATKVFACLFVLVGFGFID---ILLSGVVNYVLDLQENMILTGIQM 201
            +    Y      T   +    +        ID   +L+      +    +  +   + +
Sbjct: 46  AVIWGAYLLQLAATLLKRRAGVVRDRTPKIAIDVLAVLVPLAAFLLDGSPDWSLYCAVWL 105

Query: 202 GKVKEGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWL------ 255
            K     +    +  V     R    +     +  + +   AL  + +E           
Sbjct: 106 LKPLRDSTFFPVLGRVLANEAR---NLIGVTTLFGVVLFAVALAAYVIERDIQPEKFGSI 162

Query: 256 -DSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVA--RAFLYLAEARIDKRHR 312
             + + +V++++T GYGD   ++  GR  A   ++    +       L     +  +R  
Sbjct: 163 PQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIGIFGLWAGILATGFYQEVRRGD 222

Query: 313 RIAKWVLQREITIDDLLAAD 332
            +  W L   + +   L   
Sbjct: 223 FVRNWQLVAAVPLFQKLGPA 242

>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A* Length = 301

 Score = 59.3 bits (143), Expect = 4e-10
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 106 FVLLSIYLFVGVV---IYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATK 162
            ++  +YL    +    Y    D           DA +F + TM TIGYG + P+ P   
Sbjct: 51  TLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLAN 110

Query: 163 VFACLFVLVGFGFIDILLSGVV 184
               L  L G   + +  S + 
Sbjct: 111 TLVTLEALCGMLGLAVAASLIY 132

>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A* Length = 301

 Score = 54.7 bits (131), Expect = 1e-08
 Identities = 25/148 (16%), Positives = 52/148 (35%), Gaps = 11/148 (7%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDLD-------WLDSFYLSVMSVTTVGYGDR 273
            +   + + L  G+ ++  A+ AL      D+        + D+F+ SV ++ T+GYG  
Sbjct: 43  TVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKL 102

Query: 274 AFKTLPGRFFAAIWLLFSTLMVARAF-LYLAEARIDKRHRRIAKWVLQREITIDDLL--- 329
                       +  L   L +A A  L  A           +  ++  +      L   
Sbjct: 103 IPIGPLANTLVTLEALCGMLGLAVAASLIYARFTRPTAGVLFSSRMVISDFEGKPTLMMR 162

Query: 330 AADMNHNGFISKSEYVIFKLKEMGKIGE 357
            A++     I    +++    E+ + G 
Sbjct: 163 LANLRIEQIIEADVHLVLVRSEISQEGM 190

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Length = 514

 Score = 60.1 bits (145), Expect = 5e-10
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 103 RQAFVLLSIYLFVGVVIYSF------NTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAP 156
            +   LL  +LF+GV+++S         +  S   + P  DA ++ +V+M T+GYGD+ P
Sbjct: 340 MRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIP--DAFWWAVVSMTTVGYGDMVP 397

Query: 157 LTPATKVFACLFVLVGFGFIDILLSGVVN 185
            T   K+   L  + G   I + +  +V+
Sbjct: 398 TTIGGKIVGSLCAIAGVLTIALPVPVIVS 426

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Length = 514

 Score = 59.3 bits (143), Expect = 9e-10
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 223 RIRLKVGLALGVVVLCIAIGALILFFLEDLDWL-------DSFYLSVMSVTTVGYGDRAF 275
               ++GL +  + + + + +  ++F E  +         D+F+ +V+S+TTVGYGD   
Sbjct: 338 ASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVP 397

Query: 276 KTLPGRFFAAIWLLFSTLMVA-------RAFLYLAEARIDKRHRRIAKWVLQREITIDDL 328
            T+ G+   ++  +   L +A         F Y      +   +     V          
Sbjct: 398 TTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSSPKIPSSP 457

Query: 329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKIT 379
                     ISKS+Y+  +        +     +    + L   N   IT
Sbjct: 458 DLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTANSTLANTNYVNIT 508

>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans} Length = 321

 Score = 53.6 bits (128), Expect = 4e-08
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 95  KSESSFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDI 154
           K    F+      LL    F    +Y   +   +         A +F + T+ T+GYGD+
Sbjct: 41  KWRWFFVSLAVLFLLLNTAFA--TLYMLGSAPIANQFPAGFGGAFFFSVETLATVGYGDM 98

Query: 155 APLTPATKVFACLFVLVGFGFIDILLSGVV 184
            P T      A L + VG   I +      
Sbjct: 99  HPQTVYAHWIATLEIFVGMSSIALATGCAF 128

>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans} Length = 321

 Score = 47.4 bits (112), Expect = 3e-06
 Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 230 LALGVVVLCIAIGALILFFLEDLD--------WLDSFYLSVMSVTTVGYGDRAFKTLPGR 281
           ++L V+ L +      L+ L            +  +F+ SV ++ TVGYGD   +T+   
Sbjct: 47  VSLAVLFLLLNTAFATLYMLGSAPIANQFPAGFGGAFFFSVETLATVGYGDMHPQTVYAH 106

Query: 282 FFAAIWLLFSTLMVAR----AFLYLAEARIDKRHRRIAKWVLQREITIDDLL---AADMN 334
           + A + +      +A     AF+ +++ +        ++  +         L     ++ 
Sbjct: 107 WIATLEIFVGMSSIALATGCAFIKMSQPKKRAETLMFSEHAVISMRDGKLTLMFRVGNLR 166

Query: 335 HNGFISKSEYVIFKLKEMGKIGE 357
           ++  +S               GE
Sbjct: 167 NSHMVSAQIRCKLLKSRQTPEGE 189

>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A* Length = 333

 Score = 53.3 bits (127), Expect = 4e-08
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 1/80 (1%)

Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
           A + +       ++    +    +       V A +F + T+ T+GYGD+ P T      
Sbjct: 68  AALFVVNNTLFALLYQLGDAPI-ANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAI 126

Query: 165 ACLFVLVGFGFIDILLSGVV 184
           A L + VG   I +    V 
Sbjct: 127 ATLEIFVGMSGIALSTGLVF 146

>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A* Length = 333

 Score = 50.2 bits (119), Expect = 4e-07
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 16/176 (9%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDLD--------WLDSFYLSVMSVTTVGYGD 272
           ++   +       + V+   + AL L+ L D          ++ +F+ SV ++ TVGYGD
Sbjct: 57  KVSWPVFFASLAALFVVNNTLFAL-LYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGD 115

Query: 273 RAFKTLPGRFFAAIWLLFSTLMVARA----FLYLAEARIDKRHRRIAKWVLQREITIDDL 328
              +T+     A + +      +A +    F   A  R      R A            +
Sbjct: 116 MHPQTVYAHAIATLEIFVGMSGIALSTGLVFARFARPRAKIMFARHAIVRPFNGRMTLMV 175

Query: 329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL 384
            AA+   N        +    +E    G      +     +L  N      L   +
Sbjct: 176 RAANARQNVIAEARAKMRLMRREHSSEGYS---LMKIHDLKLVRNEHPIFLLGWNM 228

>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A* Length = 340

 Score = 44.0 bits (103), Expect = 4e-05
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGV-ETHPVVDALYFCIVTMCTIGYGDIAP--LTPAT 161
             +   I    G + +  +      V   +  V A  F I T  TIGYG        P  
Sbjct: 61  GMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEG 120

Query: 162 KVFACLFVLVGFGFIDILLSGVV 184
            +   +  ++G   ++  + G +
Sbjct: 121 IILLLIQSVLGS-IVNAFMVGCM 142

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 332 DMNHNGFISKSE--YVIFKLKEMGKIGEKDISQICNQ-FNRLDPNNCGKITLPDLLE 385
           D + NG I K+E   +   ++ +         +  N  F+++D NN G++TL + + 
Sbjct: 103 DADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFIN 159

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
3ukm_A	280	Potassium channel subfamily K member 1; membrane p	100.0
3um7_A	309	Potassium channel subfamily K member 4; potassium	99.98
3eff_K	139	Voltage-gated potassium channel; FULL length KCSA,	99.72
2k1e_A	103	Water soluble analogue of potassium channel, KCSA;	99.72
3ldc_A	82	Calcium-gated potassium channel MTHK; transmembran	99.7
3ouf_A	97	Potassium channel protein; ION channel, membrane,	99.7
4h33_A	137	LMO2059 protein; bilayers, KVLM, lipidic cubic pha	99.68
2ih3_C	122	Voltage-gated potassium channel; ION channel D-ami	99.67
2q67_A	114	Potassium channel protein; inverted teepee, helix	99.65
3vou_A	148	ION transport 2 domain protein, voltage-gated SOD	99.65
2a9h_A	155	Voltage-gated potassium channel; potassium channel	99.64
2k1e_A	103	Water soluble analogue of potassium channel, KCSA;	99.63
3eff_K	139	Voltage-gated potassium channel; FULL length KCSA,	99.6
2ih3_C	122	Voltage-gated potassium channel; ION channel D-ami	99.58
3ouf_A	97	Potassium channel protein; ION channel, membrane,	99.58
3pjs_K	166	KCSA, voltage-gated potassium channel; ION channel	99.57
3ldc_A	82	Calcium-gated potassium channel MTHK; transmembran	99.56
2a9h_A	155	Voltage-gated potassium channel; potassium channel	99.56
4h33_A	137	LMO2059 protein; bilayers, KVLM, lipidic cubic pha	99.53
2q67_A	114	Potassium channel protein; inverted teepee, helix	99.53
1orq_C	223	Potassium channel; voltage-dependent, KVAP, FAB co	99.53
3vou_A	148	ION transport 2 domain protein, voltage-gated SOD	99.51
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	99.45
3pjs_K	166	KCSA, voltage-gated potassium channel; ION channel	99.45
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	99.42
3um7_A	309	Potassium channel subfamily K member 4; potassium	99.42
3ukm_A	280	Potassium channel subfamily K member 1; membrane p	99.35
1lnq_A	336	MTHK channels, potassium channel related protein;	99.32
1orq_C	223	Potassium channel; voltage-dependent, KVAP, FAB co	99.32
1xl4_A	301	Inward rectifier potassium channel; integral membr	99.31
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	99.29
1p7b_A	333	Integral membrane channel and cytosolic domains; t	99.27
1p7b_A	333	Integral membrane channel and cytosolic domains; t	99.24
2qks_A	321	KIR3.1-prokaryotic KIR channel chimera; G-protein	99.24
1xl4_A	301	Inward rectifier potassium channel; integral membr	99.23
1lnq_A	336	MTHK channels, potassium channel related protein;	99.18
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	99.12
2qks_A	321	KIR3.1-prokaryotic KIR channel chimera; G-protein	99.12
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	99.08
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	98.97
3sya_A	340	G protein-activated inward rectifier potassium CH;	98.97
3rvy_A	285	ION transport protein; tetrameric ION channel, vol	98.93
3spc_A	343	Inward-rectifier K+ channel KIR2.2; PIP, membrane	98.87
3sya_A	340	G protein-activated inward rectifier potassium CH;	98.73
3spc_A	343	Inward-rectifier K+ channel KIR2.2; PIP, membrane	98.62
3rvy_A	285	ION transport protein; tetrameric ION channel, vol	97.99
4dxw_A	229	Navrh, ION transport protein; tetrameric, voltage-	96.5
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	95.11
3kg2_A	823	Glutamate receptor 2; ION channel, membrane protei	95.05
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	94.76
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	94.63
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	94.45
3li6_A	66	Calcium-binding protein; calcium signaling protein	94.38
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	94.29
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	94.13
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	94.12
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	94.03
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	93.96
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	93.91
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	93.8
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	93.77
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	93.62
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	93.55
3pjz_A	494	Potassium uptake protein TRKH; structural genomics	93.55
4dxw_A	229	Navrh, ION transport protein; tetrameric, voltage-	93.35
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	93.35
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	93.3
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	93.28
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	93.25
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	93.21
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	93.18
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	93.13
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	93.04
1c07_A	95	Protein (epidermal growth factor receptor pathway	93.02
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	93.01
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	92.98
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	92.97
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	92.92
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	92.89
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	92.88
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	92.88
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	92.8
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	92.68
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	92.62
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	92.51
3kg2_A	823	Glutamate receptor 2; ION channel, membrane protei	92.5
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	92.5
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	92.47
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	92.45
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	92.42
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	92.38
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	92.33
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	92.2
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	92.17
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	92.14
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	92.02
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	91.99
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	91.99
1c07_A	95	Protein (epidermal growth factor receptor pathway	91.96
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	91.88
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	91.86
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	91.85
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	91.84
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	91.83
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	91.81
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	91.77
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	91.76
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	91.72
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	91.62
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	91.62
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	91.61
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	91.59
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	91.55
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	91.49
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	91.47
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	91.47
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	91.39
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	91.35
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	91.35
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	91.22
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	91.2
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	91.18
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	91.15
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	91.11
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	91.1
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	91.03
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	91.03
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	91.01
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	90.99
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	90.96
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	90.95
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	90.95
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	90.93
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	90.93
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	90.9
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	90.85
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	90.76
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	90.76
3fwb_A	161	Cell division control protein 31; gene gating, com	90.75
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	90.73
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	90.72
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	90.71
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	90.67
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	90.65
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	90.61
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	90.58
3fwb_A	161	Cell division control protein 31; gene gating, com	90.56
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	90.53
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	90.53
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	90.5
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	90.49
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	90.48
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	90.47
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	90.47
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	90.46
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	90.43
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	90.43
2jnf_A	158	Troponin C; stretch activated muscle contraction,	90.35
1y1x_A	191	Leishmania major homolog of programmed cell death	90.35
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	90.33
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	90.25
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	90.24
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	90.22
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	90.21
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	90.18
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	90.07
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	90.02
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	90.0
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	89.93
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	89.9
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	89.9
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	89.88
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	89.86
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	89.85
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	89.85
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	89.84
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	89.78
2jq6_A	139	EH domain-containing protein 1; metal binding prot	89.7
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	89.68
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	89.62
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	89.6
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	89.47
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	89.47
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	89.37
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	89.34
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	89.23
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	89.21
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	89.18
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	89.15
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	89.15
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	89.11
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	89.05
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	89.05
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	89.02
2jnf_A	158	Troponin C; stretch activated muscle contraction,	89.01
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	88.97
2hps_A	186	Coelenterazine-binding protein with bound coelent;	88.9
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	88.77
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	88.76
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	88.63
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	88.54
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	88.48
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	88.37
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	88.36
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	88.35
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	88.33
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	88.32
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	88.3
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	88.29
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	88.19
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	88.07
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	88.05
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	87.88
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	87.86
1y1x_A	191	Leishmania major homolog of programmed cell death	87.76
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	87.72
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	87.7
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	87.68
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	87.59
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	87.58
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	87.42
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	87.31
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	87.26
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	87.24
3pjz_A	494	Potassium uptake protein TRKH; structural genomics	87.01
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	86.79
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	86.74
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	86.7
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	86.68
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	86.67
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	86.48
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	86.41
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	86.38
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	86.25
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	86.06
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	86.0
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	85.94
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	85.81
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	85.71
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	85.7
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	85.65
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	85.63
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	85.39
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	85.31
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	85.2
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	85.12
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	85.1
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	85.1
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	85.04
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	85.03
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	84.92
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	84.75
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	84.64
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	84.52
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	84.47
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	84.46
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	84.14
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	84.12
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	83.9
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	83.7
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	83.62
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	83.57
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	83.47
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	83.43
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	83.07
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	83.06
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	82.89
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	82.87
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	82.82
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	82.8
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	82.72
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	82.64
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	82.56
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	82.54
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	82.49
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	82.43
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	82.03
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	81.79
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	81.56
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	81.56
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	81.37
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	81.35
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	81.35
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	80.71
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	80.69
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	80.39
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	80.32
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	80.2

>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}

Probab=100.00  E-value=9.4e-34  Score=267.47  Aligned_cols=202  Identities=24%  Similarity=0.356  Sum_probs=155.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccc------------------------------------------------ccCCCC
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTD------------------------------------------------HFSGVE  131 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~------------------------------------------------~~~~~~  131 (388)
                      .....+++..++|+++|+++|...+.                                                +..+.+
T Consensus        11 ~~l~lLil~~~~Yl~~GA~vF~~LE~p~E~~~r~~~~~~~~~fl~~~~~~s~~~l~~~~~~~~~a~~~g~~~~~~~~~~~   90 (280)
T 3ukm_A           11 TMFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLKRRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSQASGNW   90 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHTTTCCCC------C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhcCCccccCCCCCC
Confidence            44445556678899999999986430                                                112356


Q ss_pred             CCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCcccc
Q 016527          132 THPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSAR  211 (388)
Q Consensus       132 ~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  211 (388)
                      .|+|.+|+||+++|+|||||||++|.|+.||+|+++|+++|++++.+.++.+++.+.....++..+.+   ++++..   
T Consensus        91 ~w~~~~a~yf~~~t~tTvGyGd~~P~T~~Gk~f~~~~~l~Gi~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~---  164 (280)
T 3ukm_A           91 NWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYF---HIRWGF---  164 (280)
T ss_dssp             CSSHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTTTTC------------
T ss_pred             CCChhcchhheeeeeeccccCCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC---
Confidence            79999999999999999999999999999999999999999999999999998877664322211111   111100   


Q ss_pred             cceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcccceeeeEeeeeccccCCCccCCcCc-------chh
Q 016527          212 DYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLE-DLDWLDSFYLSVMSVTTVGYGDRAFKTLPG-------RFF  283 (388)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e-~~s~~da~y~~~iT~tTVGyGDi~p~t~~g-------r~~  283 (388)
                            .+.+......+.+.+.++++++++|+++++..| +|+|+||+||+++|+|||||||++|.+..|       |++
T Consensus       165 ------~~~~~~~~~~~~l~~~~~~~~~~~ga~~~~~~E~~~s~~da~y~~~iTltTvGyGD~~p~t~~~~~~~~l~r~~  238 (280)
T 3ukm_A          165 ------SKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIG  238 (280)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCCCCSCCSSCSSSCTTHHHHHHH
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhhhheeeeeecccCCCCCCCCCcccccchhHHHH
Confidence                  111222233344455666778889999999998 899999999999999999999999999874       999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          284 AAIWLLFSTLMVARAFLYLAEARIDKRHRR  313 (388)
Q Consensus       284 ~~~~~l~G~~~~~~~~~~l~~~~~~~~~~~  313 (388)
                      +++|+++|++++++.++.+++....++.++
T Consensus       239 ~~~~il~Gl~~~~~~~~~i~~~~~~~~l~~  268 (280)
T 3ukm_A          239 ITCYLLLGLIAMLVVLETFCELHELKKFRK  268 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999877766554

>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}

Probab=99.98  E-value=3.8e-33  Score=267.01  Aligned_cols=167  Identities=23%  Similarity=0.336  Sum_probs=132.5

Q ss_pred             CCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCccc
Q 016527          131 ETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQMGKVKEGFSA  210 (388)
Q Consensus       131 ~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  210 (388)
                      +.|+|.+|+||+++|+|||||||++|.|..||+|+++|+++|+++++++++.+++.+.+..++...+..+... ++  +.
T Consensus       112 ~~w~~~~a~yf~~~t~tTvGYGdi~P~T~~gk~~~i~~~l~Gi~~~~~~~~~i~~~l~~~~~~~i~~le~~~~-~~--~~  188 (309)
T 3um7_A          112 SAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGDRLGSSLRHGIGHIEAIFL-KW--HV  188 (309)
T ss_dssp             -CCSHHHHHHHHHHHHTSCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHT-TT--C-
T ss_pred             CCCChhhhhHhhheeeeecccCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHh-cc--cc
Confidence            4699999999999999999999999999999999999999999999999999999887754433222111111 00  00


Q ss_pred             ccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcch------hh
Q 016527          211 RDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRF------FA  284 (388)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~------~~  284 (388)
                             .....+....+...+..+++++++|+++|+..|+|+|.||+||+++|+|||||||++|.+..||.      ++
T Consensus       189 -------~~~~~~~~~~~l~~~~~~~~~l~~ga~~~~~~E~~~~~da~y~~~vTltTvGyGd~~p~t~~g~~~~~y~~~~  261 (309)
T 3um7_A          189 -------PPELVRVLSAMLFLLIGCLLFVLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPAYQPLV  261 (309)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCHHHHHHHHHHHHTTCCCSSCCTTCCTTCCCSTHHHHH
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeccccCCCCCCCccccccchHHHHH
Confidence                   01112222223344455567788999999999999999999999999999999999999999985      99


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 016527          285 AIWLLFSTLMVARAFLYLAEARI  307 (388)
Q Consensus       285 ~~~~l~G~~~~~~~~~~l~~~~~  307 (388)
                      ++|+++|++++++.++.+++...
T Consensus       262 ~~~il~Gl~~~a~~~~~i~~~~~  284 (309)
T 3um7_A          262 WFWILLGLAYFASVLTTIGNWLR  284 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998887543

>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}

Probab=99.72  E-value=3.2e-18  Score=146.16  Aligned_cols=88  Identities=24%  Similarity=0.308  Sum_probs=77.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHH
Q 016527          225 RLKVGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVAR  297 (388)
Q Consensus       225 ~~~~~~~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~  297 (388)
                      .+.+..+++++++++++++.+++..|+       |+|.||+||+++|+|||||||++|.|..||+++++++++|++++++
T Consensus         5 ~r~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~tTvGyGd~~P~t~~~r~~~~~~~~~G~~~~~~   84 (139)
T 3eff_K            5 WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGL   84 (139)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHTTSSCTTCCCCCHHHHHHHHHHHHTTCCCSSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHheeeecccCCCCcCCCcCHHHHHHHHHHHHHHHHHH
Confidence            344566667777888899999999998       9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 016527          298 AFLYLAEARIDKRHR  312 (388)
Q Consensus       298 ~~~~l~~~~~~~~~~  312 (388)
                      +++.+++.+.++..+
T Consensus        85 ~~~~i~~~~~~~~~~   99 (139)
T 3eff_K           85 VTAALATWFVGREQE   99 (139)
T ss_dssp             HHHHHTTTTTHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999876654433

>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A

Probab=99.72  E-value=4.6e-18  Score=137.79  Aligned_cols=87  Identities=23%  Similarity=0.142  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcC-------CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHH
Q 016527          226 LKVGLALGVVVLCIAIGALILFFLEDL-------DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARA  298 (388)
Q Consensus       226 ~~~~~~~~~~~~~i~~g~~~~~~~e~~-------s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~  298 (388)
                      +++..+++.+++++++++.+++..|++       +|.||+||+++|+|||||||++|.|..||+++++++++|++++++.
T Consensus         6 r~~l~~~~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~l~G~~~~~~~   85 (103)
T 2k1e_A            6 REAQKAEEELQKVLEEASKKAVEAERGAPGAALISYPDAIWWSVETATTVGYGDRYPVTEEGRKVAEQVMKAGIEVFALV   85 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCGGGTTTTTTGGGGCCSCCSSCCCSSSCTHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccCCCCcccccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            345556667777888899999999986       9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 016527          299 FLYLAEARIDKRHR  312 (388)
Q Consensus       299 ~~~l~~~~~~~~~~  312 (388)
                      ++.+++.+.++.++
T Consensus        86 ~~~i~~~~~~~~~~   99 (103)
T 2k1e_A           86 TAALATDFVRREEE   99 (103)
T ss_dssp             HHHHHTTGGGHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999877665443

>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A

Probab=99.70  E-value=4.9e-18  Score=131.82  Aligned_cols=77  Identities=29%  Similarity=0.405  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016527          230 LALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEAR  306 (388)
Q Consensus       230 ~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~  306 (388)
                      ..+.+++.+++.|+.+++..|+|++.||+||+++|+|||||||+.|.|..||+++++++++|+.++++.++.+++.+
T Consensus         5 ~~~~l~~~~~~~g~~~~~~~e~~~~~~a~yf~~~T~tTvGyGdi~P~t~~~r~~~~~~~~~G~~~~~~~~~~i~~~l   81 (82)
T 3ldc_A            5 RILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIVLGIGTFAVAVERLLEFL   81 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45556667788999999999999999999999999999999999999999999999999999999999999998754

>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A

Probab=99.70  E-value=8.6e-18  Score=134.61  Aligned_cols=82  Identities=26%  Similarity=0.386  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 016527          226 LKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEA  305 (388)
Q Consensus       226 ~~~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~  305 (388)
                      +.+...+.+++++++.|+++++..|+|++.||+||+++|+|||||||++|.|..||+++++++++|++++++.++.+++.
T Consensus         5 ~~~~~~~~~~~~~~~~g~~~~~~~e~~~~~~a~yf~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~i~~i~~~   84 (97)
T 3ouf_A            5 KEFQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGYGDFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVN   84 (97)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556666777788889999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             HH
Q 016527          306 RI  307 (388)
Q Consensus       306 ~~  307 (388)
                      ..
T Consensus        85 ~~   86 (97)
T 3ouf_A           85 VQ   86 (97)
T ss_dssp             TH
T ss_pred             Hh
Confidence            54

>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A

Probab=99.68  E-value=2.6e-18  Score=146.33  Aligned_cols=72  Identities=26%  Similarity=0.384  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHhh--cCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          237 LCIAIGALILFFLE--DLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       237 ~~i~~g~~~~~~~e--~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      +++++++..++..|  .|+|.||+||+++|+|||||||++|.|..||+++++++++|+++++++++.+++.+.+
T Consensus        25 ~~~~~~~~~~~~~e~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~g~~~~~~~~~~i~~~~~~   98 (137)
T 4h33_A           25 LLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRC   98 (137)
T ss_dssp             HHHHHTHHHHHHHCSSCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344444445555  4899999999999999999999999999999999999999999999999999876543

>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...

Probab=99.67  E-value=3.7e-17  Score=136.46  Aligned_cols=84  Identities=21%  Similarity=0.297  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 016527          229 GLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLY  301 (388)
Q Consensus       229 ~~~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~  301 (388)
                      ..++..+++++++++.+++..|+       |++.||+||+++|+|||||||++|.|..||+++++++++|++++++.++.
T Consensus        30 ~~~~~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~Gi~~~~~~~~~  109 (122)
T 2ih3_C           30 GAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVAYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAA  109 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhheeeecCCCCccCccccchhheeeeeeeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555667888899999997       89999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 016527          302 LAEARIDKRHR  312 (388)
Q Consensus       302 l~~~~~~~~~~  312 (388)
                      +++.+.+..++
T Consensus       110 i~~~~~~~~~~  120 (122)
T 2ih3_C          110 LATWFVGREQE  120 (122)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99988775543

>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A

Probab=99.65  E-value=5.4e-17  Score=133.80  Aligned_cols=79  Identities=24%  Similarity=0.360  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016527          228 VGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEAR  306 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~  306 (388)
                      +...+.++++++++|+++++..|+|++.||+||+++|+|||||||++|.|..||+++++++++|++++++.++.+++..
T Consensus        24 ~~~~~~~~~~~~~~g~~~~~~~e~~~~~~a~y~~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~~~~l~~~~  102 (114)
T 2q67_A           24 FQVLFVLTILTLISGTIFYSTVEGLRPIDALYFSVVTLTTVGAGNFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNV  102 (114)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHTSCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcceeCCCCccCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445556666778899999999999999999999999999999999999999999999999999999999999988754

>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}

Probab=99.65  E-value=8.8e-17  Score=138.70  Aligned_cols=77  Identities=26%  Similarity=0.371  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 016527          228 VGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAE  304 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~  304 (388)
                      +..++.++++++++|+++++..|+|+|.||+||+++|+|||||||++|.|..||+++++++++|++++++.++.+++
T Consensus        27 ~~~~~~~~~~~~~~g~~~~~~~e~~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~  103 (148)
T 3vou_A           27 FQVLFVLTFLTLTSGTIFYSTVEGLRPLDALYFSVVTLTTVGDGNFSPQTDFGKVFTILYIFIGIGLVFGFIHKLAV  103 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHTTCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44455666677788888999999999999999999999999999999999999999999999999999999998875

>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1

Probab=99.64  E-value=4.7e-17  Score=141.25  Aligned_cols=81  Identities=27%  Similarity=0.349  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC-------CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 016527          229 GLALGVVVLCIAIGALILFFLEDL-------DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLY  301 (388)
Q Consensus       229 ~~~~~~~~~~i~~g~~~~~~~e~~-------s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~  301 (388)
                      ..++..+++++++++.+++..|++       +|.||+||+++|+|||||||++|.|..||+++++++++|+++++++++.
T Consensus        53 ~~~~~~~~~~i~~~a~~~~~~E~~~~~~~~~s~~~a~y~s~vTltTVGYGDi~P~t~~gr~~~~~~~l~Gv~~~a~~~~~  132 (155)
T 2a9h_A           53 GAATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSYGLVFAA  132 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSSCSSTTSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCCccCcccceeheeeeeeecccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455566778899999999987       8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 016527          302 LAEARIDK  309 (388)
Q Consensus       302 l~~~~~~~  309 (388)
                      +++.+.++
T Consensus       133 i~~~~~~~  140 (155)
T 2a9h_A          133 VATWFVGR  140 (155)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHHHHH
Confidence            99877654

>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A

Probab=99.63  E-value=3e-16  Score=126.98  Aligned_cols=87  Identities=18%  Similarity=0.183  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHH
Q 016527          105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVV  184 (388)
Q Consensus       105 ~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~  184 (388)
                      .++.+++++++++.+|+..+...++...++|.+|+||+++|+|||||||++|.++.||+++++++++|+.++++.++.+.
T Consensus        11 ~~~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~l~G~~~~~~~~~~i~   90 (103)
T 2k1e_A           11 AEEELQKVLEEASKKAVEAERGAPGAALISYPDAIWWSVETATTVGYGDRYPVTEEGRKVAEQVMKAGIEVFALVTAALA   90 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSTTCCCCCGGGTTTTTTGGGGCCSCCSSCCCSSSCTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhccCCCCcccccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44455555666666666655444455668999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHH
Q 016527          185 NYVLDLQ  191 (388)
Q Consensus       185 ~~~~~~~  191 (388)
                      +.+.+..
T Consensus        91 ~~~~~~~   97 (103)
T 2k1e_A           91 TDFVRRE   97 (103)
T ss_dssp             TTGGGHH
T ss_pred             HHHHHHH
Confidence            8776654

>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}

Probab=99.60  E-value=3.1e-16  Score=133.81  Aligned_cols=90  Identities=22%  Similarity=0.407  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHH
Q 016527          104 QAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGV  183 (388)
Q Consensus       104 ~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~  183 (388)
                      ...+++++++++++.+++..+....+...|+|.+|+||+++|+|||||||++|.|+.||+++++++++|+++++++++.+
T Consensus        10 ~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~tTvGyGd~~P~t~~~r~~~~~~~~~G~~~~~~~~~~i   89 (139)
T 3eff_K           10 AATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAAL   89 (139)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSCTTCCCCCHHHHHHHHHHHHTTCCCSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHheeeecccCCCCcCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444555566666666665554455567999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 016527          184 VNYVLDLQEN  193 (388)
Q Consensus       184 ~~~~~~~~~~  193 (388)
                      ++.+.+...+
T Consensus        90 ~~~~~~~~~~   99 (139)
T 3eff_K           90 ATWFVGREQE   99 (139)
T ss_dssp             TTTTTHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8877665433

>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...

Probab=99.58  E-value=1.3e-15  Score=127.13  Aligned_cols=88  Identities=22%  Similarity=0.376  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHH
Q 016527          105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVV  184 (388)
Q Consensus       105 ~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~  184 (388)
                      ....+++++++++.+++..++..++...|++.||+||+++|+|||||||++|.|+.||++++++++.|+.++++.++.+.
T Consensus        32 ~~~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~Gi~~~~~~~~~i~  111 (122)
T 2ih3_C           32 ATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVAYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALA  111 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhheeeecCCCCccCccccchhheeeeeeeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33344444555655555544443455669999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 016527          185 NYVLDLQE  192 (388)
Q Consensus       185 ~~~~~~~~  192 (388)
                      +.+.+..+
T Consensus       112 ~~~~~~~~  119 (122)
T 2ih3_C          112 TWFVGREQ  119 (122)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            98877644

>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A

Probab=99.58  E-value=1.4e-15  Score=121.77  Aligned_cols=82  Identities=34%  Similarity=0.596  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      +.+....++++++++.|+++|...       |+|++.||+||+++|+|||||||++|.|+.||+++++++++|++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~g~~~~~~~-------e~~~~~~a~yf~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~   77 (97)
T 3ouf_A            5 KEFQVLFVLTILTLISGTIFYSTV-------EGLRPIDALYFSVVTLTTVGYGDFSPQTDFGKIFTILYIFIGIGLVFGF   77 (97)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-------SCCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            566667777888888899988764       5699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 016527          180 LSGVVNYVL  188 (388)
Q Consensus       180 ~~~~~~~~~  188 (388)
                      ++.+...+.
T Consensus        78 i~~i~~~~~   86 (97)
T 3ouf_A           78 IHKLAVNVQ   86 (97)
T ss_dssp             HHHHHHHTH
T ss_pred             HHHHHHHHh
Confidence            998887664

>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A

Probab=99.57  E-value=6.7e-18  Score=148.52  Aligned_cols=79  Identities=25%  Similarity=0.324  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHH
Q 016527          231 ALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLA  303 (388)
Q Consensus       231 ~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~  303 (388)
                      +++++++++++++++++..|+       |+|.||+||+++|+|||||||++|.|..||+++++++++|+++++++++.++
T Consensus        38 ~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~tTvGyGDi~P~t~~~r~~~~~~~l~G~~~~~~~~~~i~  117 (166)
T 3pjs_K           38 ATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALA  117 (166)
T ss_dssp             TSSSSTTTTTTTSSSSSSTTSSSTTCCCCSTTTTTTTTHHHHSCCCCSSSCCCSSTTTTTTHHHHHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHhccccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334455667778888899988       9999999999999999999999999999999999999999999999999988


Q ss_pred             HHHHHH
Q 016527          304 EARIDK  309 (388)
Q Consensus       304 ~~~~~~  309 (388)
                      +.+.+.
T Consensus       118 ~~~~~~  123 (166)
T 3pjs_K          118 TWFVGQ  123 (166)
T ss_dssp             SSSSSS
T ss_pred             HHHHHH
Confidence            766543

>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A

Probab=99.56  E-value=1.5e-15  Score=117.74  Aligned_cols=76  Identities=26%  Similarity=0.609  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHH
Q 016527          105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVV  184 (388)
Q Consensus       105 ~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~  184 (388)
                      +.++++.+++.|+.+|+..       |+|++.||+||+++|+|||||||++|.|+.||++++++++.|++++++.++.+.
T Consensus         6 ~~~l~~~~~~~g~~~~~~~-------e~~~~~~a~yf~~~T~tTvGyGdi~P~t~~~r~~~~~~~~~G~~~~~~~~~~i~   78 (82)
T 3ldc_A            6 ILLLVLAVIIYGTAGFHFI-------EGESWTVSLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIVLGIGTFAVAVERLL   78 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-------HCCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-------hcCCHHHHHHHHHHHhcccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4455666778888888763       568999999999999999999999999999999999999999999999999888


Q ss_pred             HHH
Q 016527          185 NYV  187 (388)
Q Consensus       185 ~~~  187 (388)
                      +.+
T Consensus        79 ~~l   81 (82)
T 3ldc_A           79 EFL   81 (82)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1

Probab=99.56  E-value=1.2e-15  Score=132.31  Aligned_cols=87  Identities=25%  Similarity=0.423  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHH
Q 016527          104 QAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGV  183 (388)
Q Consensus       104 ~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~  183 (388)
                      ...+.+++++++++.+++..+...++...+++.+|+||+++|+|||||||++|.|+.||+++++++++|+.++++.++.+
T Consensus        54 ~~~~~~~~~i~~~a~~~~~~E~~~~~~~~~s~~~a~y~s~vTltTVGYGDi~P~t~~gr~~~~~~~l~Gv~~~a~~~~~i  133 (155)
T 2a9h_A           54 AATVLLVIVLLAGSYLAVLAERGAPGAALISYPDALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSYGLVFAAV  133 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSSCSSTTSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCCccCcccceeheeeeeeecccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555566666666555554445566799999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHH
Q 016527          184 VNYVLDL  190 (388)
Q Consensus       184 ~~~~~~~  190 (388)
                      .+.+.+.
T Consensus       134 ~~~~~~~  140 (155)
T 2a9h_A          134 ATWFVGR  140 (155)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHHH
Confidence            9887654

>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A

Probab=99.53  E-value=2.4e-15  Score=128.00  Aligned_cols=84  Identities=30%  Similarity=0.565  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      .+...+.+.+++.++.+..++..+      .+.|+|.||+||+++|+|||||||++|.|+.||+++++++++|+++++++
T Consensus        15 ~l~~~l~~~~~~~~~~~~~~~~~e------~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~g~~~~~~~   88 (137)
T 4h33_A           15 GLNRFLMIFVLLVIIIPVPMVFIE------PEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMI   88 (137)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHC------SSCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHHHcccCCCCCCCCHhHHHHHHHHHHHHHHHHHHH
Confidence            444444444454455555555553      46789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 016527          180 LSGVVNYVLD  189 (388)
Q Consensus       180 ~~~~~~~~~~  189 (388)
                      ++.+.+.+.+
T Consensus        89 ~~~i~~~~~~   98 (137)
T 4h33_A           89 TSTITNFFRC   98 (137)
T ss_dssp             HHHHHTTTTT
T ss_pred             HHHHHHHHHH
Confidence            9988877653

>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A

Probab=99.53  E-value=5e-15  Score=121.97  Aligned_cols=81  Identities=32%  Similarity=0.558  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      +.+....++++++++.|+++|...       |+|++.||+||+++|+|||||||++|.|+.||++++++++.|++++++.
T Consensus        22 ~~~~~~~~~~~~~~~~g~~~~~~~-------e~~~~~~a~y~~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~   94 (114)
T 2q67_A           22 KEFQVLFVLTILTLISGTIFYSTV-------EGLRPIDALYFSVVTLTTVGAGNFSPQTDFGKIFTILYIFIGIGLVFGF   94 (114)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-------SCCCHHHHHHHHHHHHTSCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHhcceeCCCCccCCHhHHHHHHHHHHHHHHHHHHH
Confidence            334566667777888899988764       5589999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 016527          180 LSGVVNYV  187 (388)
Q Consensus       180 ~~~~~~~~  187 (388)
                      ++.+.+.+
T Consensus        95 ~~~l~~~~  102 (114)
T 2q67_A           95 IHKLAVNV  102 (114)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            98888765

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A

Probab=99.53  E-value=5.3e-15  Score=135.72  Aligned_cols=81  Identities=22%  Similarity=0.314  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHH
Q 016527          228 VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFL  300 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~  300 (388)
                      +...+..+++++.+++.+++..|+       +++.||+||+++|+|||||||+.|.|..||+++++++++|++++++.++
T Consensus       133 l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~y~~~~t~tTvGyGdi~P~t~~~~~~~~~~~~~G~~~~~~~i~  212 (223)
T 1orq_C          133 FYHLFGAVMLTVLYGAFAIYIVEYPDPNSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIG  212 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSSSTTCSCCSHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCcCcchhHHHhHHhHHhccCCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence            444555566667788889999997       8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 016527          301 YLAEARID  308 (388)
Q Consensus       301 ~l~~~~~~  308 (388)
                      .+++.+.+
T Consensus       213 ~i~~~~~~  220 (223)
T 1orq_C          213 TVSNMFQK  220 (223)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99987665

>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}

Probab=99.51  E-value=1.1e-14  Score=125.59  Aligned_cols=79  Identities=33%  Similarity=0.539  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      +.+..+.++++++++.|+++|...       |+|+|.||+||+++|+|||||||++|.|+.||+++++++++|+++++++
T Consensus        25 ~~~~~~~~~~~~~~~~g~~~~~~~-------e~~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~   97 (148)
T 3vou_A           25 KEFQVLFVLTFLTLTSGTIFYSTV-------EGLRPLDALYFSVVTLTTVGDGNFSPQTDFGKVFTILYIFIGIGLVFGF   97 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT-------SCCCHHHHHHHHHHHHTTCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            455666777778888888888764       5699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 016527          180 LSGVVN  185 (388)
Q Consensus       180 ~~~~~~  185 (388)
                      ++.+..
T Consensus        98 ~~~~~~  103 (148)
T 3vou_A           98 IHKLAV  103 (148)
T ss_dssp             HHHHHC
T ss_pred             HHHHHH
Confidence            888875

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*

Probab=99.45  E-value=6.9e-15  Score=144.05  Aligned_cols=86  Identities=16%  Similarity=0.177  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcC-------CcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHH
Q 016527          226 LKVGLALGVVVLCIAIGALILFFLEDL-------DWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARA  298 (388)
Q Consensus       226 ~~~~~~~~~~~~~i~~g~~~~~~~e~~-------s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~  298 (388)
                      ..+...+.++++++.+++.+++..|++       ++.||+||+++|+|||||||+.|.|..||+++++++++|++++++.
T Consensus       127 ~~l~~~~~~~~~~~~~~a~~~~~~e~~~~~~~f~~~~~s~y~~~~t~ttvGygd~~p~t~~~~~~~~~~~~~g~~~~~~~  206 (355)
T 3beh_A          127 RNLIGVTTLFGVVLFAVALAAYVIERDIQPEKFGSIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIGIFGLW  206 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccccHHHHHHHHHhheeecCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            344455556666777888899998875       8999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 016527          299 FLYLAEARIDKRH  311 (388)
Q Consensus       299 ~~~l~~~~~~~~~  311 (388)
                      ++.+++.+.+..+
T Consensus       207 ~~~i~~~~~~~~~  219 (355)
T 3beh_A          207 AGILATGFYQEVR  219 (355)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999987766433

>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A

Probab=99.45  E-value=5.1e-16  Score=136.42  Aligned_cols=83  Identities=22%  Similarity=0.412  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 016527          108 LLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYV  187 (388)
Q Consensus       108 ~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~  187 (388)
                      ++++++++++.+++..+....+...|+|.+|+||+++|+|||||||++|.|+.||+++++++++|+++++++++.+++.+
T Consensus        41 ~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~tTvGyGDi~P~t~~~r~~~~~~~l~G~~~~~~~~~~i~~~~  120 (166)
T 3pjs_K           41 LLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWF  120 (166)
T ss_dssp             SSTTTTTTTSSSSSSTTSSSTTCCCCSTTTTTTTTHHHHSCCCCSSSCCCSSTTTTTTHHHHHHHHHHHHHHHTTSSSSS
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHhccccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445555666666555544555669999999999999999999999999999999999999999999999999888776


Q ss_pred             HHH
Q 016527          188 LDL  190 (388)
Q Consensus       188 ~~~  190 (388)
                      .+.
T Consensus       121 ~~~  123 (166)
T 3pjs_K          121 VGQ  123 (166)
T ss_dssp             SSS
T ss_pred             HHH
Confidence            643

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=99.42  E-value=1.1e-13  Score=141.96  Aligned_cols=70  Identities=24%  Similarity=0.373  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          239 IAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       239 i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      +.+.+.+++..|+       .++.+|+||+++|+|||||||+.|.|..||+++++++++|+++++++++.+.+.+.+
T Consensus       354 ~~if~~~~~~~e~~~~~~~F~s~~~a~y~~~vT~TTvGYGDi~P~t~~gr~f~~~~~l~G~~~l~l~iavI~~~f~~  430 (514)
T 2r9r_B          354 VILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY  430 (514)
T ss_dssp             HHHHHHHHHHHHTTCTTCSCSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             HHHHHhhhheeeccCCCccccchhhhhheeeeEEEecccCCCCCCCcchHhhehhHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334444455665       389999999999999999999999999999999999999999999999988876554

>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}

Probab=99.42  E-value=1.2e-13  Score=132.07  Aligned_cols=84  Identities=26%  Similarity=0.400  Sum_probs=73.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-----------------------------------------------------
Q 016527          225 RLKVGLALGVVVLCIAIGALILFFLED-----------------------------------------------------  251 (388)
Q Consensus       225 ~~~~~~~~~~~~~~i~~g~~~~~~~e~-----------------------------------------------------  251 (388)
                      +..+..++..+++++++||.+|...|+                                                     
T Consensus        29 ~~~~l~Ll~~~~~YL~~GA~vF~~LE~~~E~~~~~~l~~~~~~fl~~~~~~~~~~l~~l~~~v~~A~~~Gv~~~~~~~~~  108 (309)
T 3um7_A           29 STTLLALLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAHPCVSDQELGLLIKEVADALGGGADPETQSTSQ  108 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHGGGTSSCCCSCSHHHHHHHHHHHHHHHTTCCCSSCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhcCCCccccccCC
Confidence            334444566778889999999998764                                                     


Q ss_pred             -----CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          252 -----LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       252 -----~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                           |+|.||+||+++|+|||||||++|.|..||+|+++++++|+.++++.++.+++.+.+
T Consensus       109 ~~~~~w~~~~a~yf~~~t~tTvGYGdi~P~T~~gk~~~i~~~l~Gi~~~~~~~~~i~~~l~~  170 (309)
T 3um7_A          109 SSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGDRLGS  170 (309)
T ss_dssp             ----CCSHHHHHHHHHHHHTSCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhhhHhhheeeeecccCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 468899999999999999999999999999999999999999999999999887655

>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}

Probab=99.35  E-value=3.7e-13  Score=126.86  Aligned_cols=84  Identities=21%  Similarity=0.432  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCccc-------chhhhhhhhhhhHHHH
Q 016527          105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPAT-------KVFACLFVLVGFGFID  177 (388)
Q Consensus       105 ~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~g-------r~~~~~~~l~Gi~~~~  177 (388)
                      .++.+++++++|+++|...+      ++|+|+||+|||++|+|||||||++|.++.|       |+++++|+++|+++++
T Consensus       178 ~~~~~~~~~~~ga~~~~~~E------~~~s~~da~y~~~iTltTvGyGD~~p~t~~~~~~~~l~r~~~~~~il~Gl~~~~  251 (280)
T 3ukm_A          178 GFVTVSCFFFIPAAVFSVLE------DDWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAML  251 (280)
T ss_dssp             HHHHHHHHTHHHHHHHHHHS------SSCCHHHHHHHHHHHHTTCCCCSCCSSCSSSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHh------cCCchhhhhhheeeeeecccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHH
Confidence            34455667788888887642      2699999999999999999999999999964       9999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 016527          178 ILLSGVVNYVLDLQENM  194 (388)
Q Consensus       178 ~~~~~~~~~~~~~~~~~  194 (388)
                      +.++.+.+.....+...
T Consensus       252 ~~~~~i~~~~~~~~l~~  268 (280)
T 3ukm_A          252 VVLETFCELHELKKFRK  268 (280)
T ss_dssp             HHHHHHHTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999988776554433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=99.32  E-value=5.4e-15  Score=143.74  Aligned_cols=78  Identities=28%  Similarity=0.431  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          233 GVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDKR  310 (388)
Q Consensus       233 ~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~~~  310 (388)
                      +++++++++|+++|+..|+|+|.||+||+++|+|||||||++|.|..||+++++++++|++++++.++.+++.+.+++
T Consensus        25 ~~~~~~~~~~~~~~~~~e~~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  102 (336)
T 1lnq_A           25 LLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFLINRE  102 (336)
T ss_dssp             TTTTTSHHHHTTTTTTSSSCCSSTTHHHHHHHHTTCCCSSCCCCCSSHHHHHTHHHHTTSTTTTTHHHHHTTTC----
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhcccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344556778889998999999999999999999999999999999999999999999999999999999887666543

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A

Probab=99.32  E-value=1.4e-12  Score=119.49  Aligned_cols=88  Identities=27%  Similarity=0.440  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHH
Q 016527          101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILL  180 (388)
Q Consensus       101 ~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~  180 (388)
                      +...+..++++.++.++..+..+ ++.++...+++.+|+||+++|+|||||||++|.|+.||++++++++.|+.++++.+
T Consensus       133 l~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~s~y~~~~t~tTvGyGdi~P~t~~~~~~~~~~~~~G~~~~~~~i  211 (223)
T 1orq_C          133 FYHLFGAVMLTVLYGAFAIYIVE-YPDPNSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLI  211 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-SSSTTCSCCSHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCCcCCCcCcchhHHHhHHhHHhccCCCCCCCCCHhHHHHHHHHHHHHHHHHHHHH
Confidence            33333333344344444444444 33334556899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 016527          181 SGVVNYVLD  189 (388)
Q Consensus       181 ~~~~~~~~~  189 (388)
                      +.+.+.+.+
T Consensus       212 ~~i~~~~~~  220 (223)
T 1orq_C          212 GTVSNMFQK  220 (223)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999888765

>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*

Probab=99.31  E-value=7.1e-13  Score=126.91  Aligned_cols=72  Identities=22%  Similarity=0.213  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          236 VLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARI  307 (388)
Q Consensus       236 ~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~  307 (388)
                      ++.+++.+.+|+..++       ++|.||+||+++|+|||||||++|.+..||+++++++++|++++++.++.+...+.
T Consensus        58 ~~~~l~fa~ly~~~~~~~~~~~~~s~~~a~yfs~vT~tTvGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~~g~v~~~~~  136 (301)
T 1xl4_A           58 LVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCGMLGLAVAASLIYARFT  136 (301)
T ss_dssp             HHHHHHHHHHHHHTCSCSTTSCTTCHHHHHHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhccccCCCCcCCHHHHHHHhhhheeccCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555666666642       78999999999999999999999999999999999999999999999988876553

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=99.29  E-value=1.5e-12  Score=135.18  Aligned_cols=83  Identities=19%  Similarity=0.371  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH----hhc--CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHH
Q 016527          228 VGLALGVVVLCIAIGALILFF----LED--LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLY  301 (388)
Q Consensus       228 ~~~~~~~~~~~i~~g~~~~~~----~e~--~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~  301 (388)
                      +...++++++++++++++|+.    .|+  |+|+||+||+++|+|||||||++|.|..||+++++++++|++++++.++.
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~y~~~~t~tTvGygd~~p~~~~~~~~~~~~~~~g~~~~~~~~~~   99 (565)
T 4gx0_A           20 LLLYCAFLLVMLLAYASIFRYLMWHLEGRAYSFMAGIYWTITVMTTLGFGDITFESDAGYLFASIVTVSGVIFLDIILPF   99 (565)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhhhhheeeeeeeeecCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444455555555544    566  99999999999999999999999999999999999999999999998887


Q ss_pred             -HHHHHHHHH
Q 016527          302 -LAEARIDKR  310 (388)
Q Consensus       302 -l~~~~~~~~  310 (388)
                       +++.+....
T Consensus       100 ~~~~~~~~~~  109 (565)
T 4gx0_A          100 GFVSMFLAPW  109 (565)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence             665555443

>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*

Probab=99.27  E-value=3.5e-12  Score=123.48  Aligned_cols=90  Identities=21%  Similarity=0.330  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      .++..+++++++.+++++++|+++.+...+.+.++|.+|+||+++|+|||||||++|.++.||+++++++++|+.++++.
T Consensus        62 ~ll~~~~~~~l~~~l~fally~~e~~~~~~~~~~s~~~a~yfs~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~  141 (333)
T 1p7b_A           62 VFFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAIATLEIFVGMSGIALS  141 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSSSSCCCCSSSSSTHHHHHHHTTTTTTCCCSCCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcHHHhHhhhheeeeecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            44444444445555667777877655444456679999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 016527          180 LSGVVNYVLD  189 (388)
Q Consensus       180 ~~~~~~~~~~  189 (388)
                      ++.+...+.+
T Consensus       142 ig~i~~~~~~  151 (333)
T 1p7b_A          142 TGLVFARFAR  151 (333)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHHH
Confidence            9888877654

>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*

Probab=99.24  E-value=2.4e-12  Score=124.60  Aligned_cols=75  Identities=20%  Similarity=0.240  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHhh-------cCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016527          234 VVVLCIAIGALILFFLE-------DLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEAR  306 (388)
Q Consensus       234 ~~~~~i~~g~~~~~~~e-------~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~  306 (388)
                      ++++.+++++++|+...       ..+|.||+||+++|+|||||||++|.+..||+++++++++|+++++++++.+...+
T Consensus        70 ~~l~~~l~fally~~e~~~~~~~~~~s~~~a~yfs~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~ig~i~~~~  149 (333)
T 1p7b_A           70 LFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAIATLEIFVGMSGIALSTGLVFARF  149 (333)
T ss_dssp             HHHHHHHHHHTTTSSSSSCCCCSSSSSTHHHHHHHTTTTTTCCCSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccccCCCCCcHHHhHhhhheeeeecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444556666644432       14899999999999999999999999999999999999999999999999888765


Q ss_pred             HH
Q 016527          307 ID  308 (388)
Q Consensus       307 ~~  308 (388)
                      .+
T Consensus       150 ~~  151 (333)
T 1p7b_A          150 AR  151 (333)
T ss_dssp             TS
T ss_pred             HH
Confidence            43

>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}

Probab=99.24  E-value=3.9e-12  Score=122.71  Aligned_cols=57  Identities=23%  Similarity=0.275  Sum_probs=53.2

Q ss_pred             CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          252 LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARID  308 (388)
Q Consensus       252 ~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~  308 (388)
                      ++|.||+||+++|+|||||||+.|.+..||+++++++++|+++++++++.+...+..
T Consensus        77 ~s~~~a~y~s~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~~g~i~~~~~~  133 (321)
T 2qks_A           77 AGFGGAFFFSVETLATVGYGDMHPQTVYAHWIATLEIFVGMSSIALATGCAFIKMSQ  133 (321)
T ss_dssp             TTHHHHHHHHHHHHTTCCCCSSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cchhheeeeeeEEeccccCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999999998876544

>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*

Probab=99.23  E-value=5.7e-12  Score=120.60  Aligned_cols=75  Identities=24%  Similarity=0.398  Sum_probs=63.1

Q ss_pred             HHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 016527          113 LFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVL  188 (388)
Q Consensus       113 i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~  188 (388)
                      ++.|.+ |+++.+...+...++|.+|+||+++|+|||||||++|.++.||+++++.+++|+.++++.++.+.+.+.
T Consensus        62 l~fa~l-y~~~~~~~~~~~~~s~~~a~yfs~vT~tTvGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~~g~v~~~~~  136 (301)
T 1xl4_A           62 ALFALA-YLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCGMLGLAVAASLIYARFT  136 (301)
T ss_dssp             HHHHHH-HHHTCSCSTTSCTTCHHHHHHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHH-HHhhccccCCCCcCCHHHHHHHhhhheeccCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444 666654444556789999999999999999999999999999999999999999999999887776664

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=99.18  E-value=6.6e-13  Score=128.97  Aligned_cols=86  Identities=22%  Similarity=0.507  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHH
Q 016527          106 FVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVN  185 (388)
Q Consensus       106 ~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~  185 (388)
                      ++++++++++|+++|+..       +.|+|.+|+||+++|+|||||||++|.|+.||+++++++++|+.++++.++.+.+
T Consensus        24 ~~~~~~~~~~~~~~~~~~-------e~~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~   96 (336)
T 1lnq_A           24 LLLVLAVIIYGTAGFHFI-------EGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLE   96 (336)
T ss_dssp             TTTTTTSHHHHTTTTTTS-------SSCCSSTTHHHHHHHHTTCCCSSCCCCCSSHHHHHTHHHHTTSTTTTTHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHhhcccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555677888888663       5689999999999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHHHHH
Q 016527          186 YVLDLQENMILTG  198 (388)
Q Consensus       186 ~~~~~~~~~~~r~  198 (388)
                      .+.+.+.+..++.
T Consensus        97 ~~~~~~~~~~~~~  109 (336)
T 1lnq_A           97 FLINREQMKLMGL  109 (336)
T ss_dssp             TC-----------
T ss_pred             HHHHHHHHHHHhh
Confidence            8877655544443

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=99.12  E-value=2.7e-11  Score=125.70  Aligned_cols=91  Identities=25%  Similarity=0.374  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHH-H
Q 016527          105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSG-V  183 (388)
Q Consensus       105 ~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~-~  183 (388)
                      .++++++++++++++|.+....+ +.+.|+|++|+||+++|+|||||||++|.|+.||+++++++++|+.++++.++. +
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~y~~~~t~tTvGygd~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~  101 (565)
T 4gx0_A           23 YCAFLLVMLLAYASIFRYLMWHL-EGRAYSFMAGIYWTITVMTTLGFGDITFESDAGYLFASIVTVSGVIFLDIILPFGF  101 (565)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhh-cCCCCchhhhhheeeeeeeeecCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444444555555454422111 124589999999999999999999999999999999999999999999998887 6


Q ss_pred             HHHHHHHHHHHHH
Q 016527          184 VNYVLDLQENMIL  196 (388)
Q Consensus       184 ~~~~~~~~~~~~~  196 (388)
                      .+++........+
T Consensus       102 ~~~~~~~~~~~~~  114 (565)
T 4gx0_A          102 VSMFLAPWIERRL  114 (565)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH
Confidence            6666555444333

>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}

Probab=99.12  E-value=5.3e-11  Score=114.79  Aligned_cols=59  Identities=25%  Similarity=0.373  Sum_probs=54.4

Q ss_pred             CCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 016527          131 ETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLD  189 (388)
Q Consensus       131 ~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~  189 (388)
                      ..++|.+|+||+++|+|||||||++|.+..||+++++.++.|+.++++.++.+.+.+.+
T Consensus        75 ~~~s~~~a~y~s~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~~g~i~~~~~~  133 (321)
T 2qks_A           75 FPAGFGGAFFFSVETLATVGYGDMHPQTVYAHWIATLEIFVGMSSIALATGCAFIKMSQ  133 (321)
T ss_dssp             SSTTHHHHHHHHHHHHTTCCCCSSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCcchhheeeeeeEEeccccCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35699999999999999999999999999999999999999999999999888876654

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*

Probab=99.08  E-value=6.2e-11  Score=115.88  Aligned_cols=91  Identities=20%  Similarity=0.328  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      .+...+.+++++.++.++++|..+... .+....++.+|+||+++|+|||||||++|.|+.||++++++++.|+.++++.
T Consensus       128 ~l~~~~~~~~~~~~~~a~~~~~~e~~~-~~~~f~~~~~s~y~~~~t~ttvGygd~~p~t~~~~~~~~~~~~~g~~~~~~~  206 (355)
T 3beh_A          128 NLIGVTTLFGVVLFAVALAAYVIERDI-QPEKFGSIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIGIFGLW  206 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCC-CCcccccHHHHHHHHHhheeecCCCCCCCCChhHHHHHHHHHHHHHHHHHHH
Confidence            444545545555555555566555432 1122358999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 016527          180 LSGVVNYVLDLQ  191 (388)
Q Consensus       180 ~~~~~~~~~~~~  191 (388)
                      ++.+.+.+.+..
T Consensus       207 ~~~i~~~~~~~~  218 (355)
T 3beh_A          207 AGILATGFYQEV  218 (355)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999988776643

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=98.97  E-value=3.3e-10  Score=116.20  Aligned_cols=86  Identities=23%  Similarity=0.413  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHH
Q 016527          104 QAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGV  183 (388)
Q Consensus       104 ~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~  183 (388)
                      +++++++++++.|+++|..+... .+....++.+|+||+++|+|||||||+.|.+..||++++++++.|+.+++++++.+
T Consensus       346 ll~~l~i~~~if~~~~~~~e~~~-~~~~F~s~~~a~y~~~vT~TTvGYGDi~P~t~~gr~f~~~~~l~G~~~l~l~iavI  424 (514)
T 2r9r_B          346 LIFFLFIGVILFSSAVYFAEADE-RDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVI  424 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC-TTCSCSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHHhhhheeeccC-CCccccchhhhhheeeeEEEecccCCCCCCCcchHhhehhHHHHHHHHHHHHHHHH
Confidence            33444444556677777665332 23445689999999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHH
Q 016527          184 VNYVLDL  190 (388)
Q Consensus       184 ~~~~~~~  190 (388)
                      .+.+...
T Consensus       425 ~~~f~~~  431 (514)
T 2r9r_B          425 VSNFNYF  431 (514)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8766544

>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*

Probab=98.97  E-value=2e-10  Score=111.11  Aligned_cols=55  Identities=20%  Similarity=0.289  Sum_probs=50.0

Q ss_pred             CcccceeeeEeeeeccccCCCccC--CcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDRAFK--TLPGRFFAAIWLLFSTLMVARAFLYLAEARI  307 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi~p~--t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~  307 (388)
                      +|.||+||+++|+|||||||+.|.  ++.|++++.+.+++|+++++..++.+...+.
T Consensus        91 sf~~af~fSv~T~TTvGYGd~~p~~~~~~g~~l~~~~~l~G~~l~a~~~giv~ak~s  147 (340)
T 3sya_A           91 GFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKIS  147 (340)
T ss_dssp             STTHHHHHHHHHHSCCCCSSSCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHhhhheeeeeecCCCccCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            789999999999999999999997  6779999999999999999999988775443

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*

Probab=98.93  E-value=5.4e-11  Score=112.95  Aligned_cols=59  Identities=14%  Similarity=0.047  Sum_probs=49.0

Q ss_pred             CCcccceeeeEeeeeccccC-CCc-cCCcCc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          252 LDWLDSFYLSVMSVTTVGYG-DRA-FKTLPG----RFFAAIWLLFSTLMVARAFLYLAEARIDKR  310 (388)
Q Consensus       252 ~s~~da~y~~~iT~tTVGyG-Di~-p~t~~g----r~~~~~~~l~G~~~~~~~~~~l~~~~~~~~  310 (388)
                      .|+.+|+||+++|+||+||| |+. |.+..|    +.++++.++.|+++++.+++.+.+.+.+..
T Consensus       179 ~s~~~a~~~~~~~~T~~g~~~di~~p~~~~~~~~~~~f~~~~~i~~~~~lnl~~aii~~~f~~~~  243 (285)
T 3rvy_A          179 GTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAMAILN  243 (285)
T ss_dssp             SSHHHHHHHHHHHHTTTTCCCCCHHHHHTTCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             CCHHHHHHHHHHHHHhCCCcHHHHHHHHHcCChHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999 996 877765    678888899999999999999998776543

>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*

Probab=98.87  E-value=1.1e-09  Score=105.94  Aligned_cols=78  Identities=15%  Similarity=0.222  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHh---hc------------------CCcccceeeeEeeeeccccCCCccC--CcCcchhhH
Q 016527          229 GLALGVVVLCIAIGALILFFL---ED------------------LDWLDSFYLSVMSVTTVGYGDRAFK--TLPGRFFAA  285 (388)
Q Consensus       229 ~~~~~~~~~~i~~g~~~~~~~---e~------------------~s~~da~y~~~iT~tTVGyGDi~p~--t~~gr~~~~  285 (388)
                      .+.++..++.+++.++++++.   ++                  .+|.||+||+++|+|||||||+.|.  ++.|++++.
T Consensus        49 l~f~~~y~~swl~Fally~~ia~~~gdl~~~~~~~~~~~Cv~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~~~~l~~  128 (343)
T 3spc_A           49 LLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVV  128 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTGGGCTTCCSSCCCSEETCCSHHHHHHHHHHHHSCCCCSSSEECSSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccCCHHHHhheeeeeeEeecCCCccCCCCCHHHHHHHH
Confidence            333345555667777776642   11                  3789999999999999999999874  889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 016527          286 IWLLFSTLMVARAFLYLAEAR  306 (388)
Q Consensus       286 ~~~l~G~~~~~~~~~~l~~~~  306 (388)
                      +.+++|+++++..++.+...+
T Consensus       129 ~~~l~G~~l~a~~~giv~ak~  149 (343)
T 3spc_A          129 VQSIVGCIIDSFMIGAIMAKM  149 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998777543

>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*

Probab=98.73  E-value=6.4e-09  Score=100.54  Aligned_cols=58  Identities=21%  Similarity=0.249  Sum_probs=52.3

Q ss_pred             CCCcchhhhheeeeeecccccccccC--CcccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 016527          132 THPVVDALYFCIVTMCTIGYGDIAPL--TPATKVFACLFVLVGFGFIDILLSGVVNYVLD  189 (388)
Q Consensus       132 ~~s~~~a~yf~~vtltTVGYGdi~p~--t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~  189 (388)
                      ..++.+|+||+++|+|||||||++|.  ++.|++++.+.+++|+.++++.++.+...+.+
T Consensus        89 ~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~g~~l~~~~~l~G~~l~a~~~giv~ak~sr  148 (340)
T 3sya_A           89 LNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQ  148 (340)
T ss_dssp             CCSTTHHHHHHHHHHSCCCCSSSCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccCHHHHHhhhheeeeeecCCCccCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            35799999999999999999999997  78999999999999999999999887766644

>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*

Probab=98.62  E-value=2.9e-08  Score=96.02  Aligned_cols=57  Identities=23%  Similarity=0.327  Sum_probs=50.8

Q ss_pred             CCCcchhhhheeeeeecccccccccC--CcccchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 016527          132 THPVVDALYFCIVTMCTIGYGDIAPL--TPATKVFACLFVLVGFGFIDILLSGVVNYVL  188 (388)
Q Consensus       132 ~~s~~~a~yf~~vtltTVGYGdi~p~--t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~  188 (388)
                      ..++.+|+||+++|+|||||||++|.  ++.|++++.+-+++|+.++++..+.+...+.
T Consensus        92 ~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~~~~l~~~~~l~G~~l~a~~~giv~ak~s  150 (343)
T 3spc_A           92 VNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMA  150 (343)
T ss_dssp             CCSHHHHHHHHHHHHSCCCCSSSEECSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHhheeeeeeEeecCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35799999999999999999999974  8999999999999999999999887765553

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*

Probab=97.99  E-value=1.7e-06  Score=81.80  Aligned_cols=91  Identities=13%  Similarity=0.216  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeeccccc-ccc-cCCccc----chhhhhhhhhhh
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYG-DIA-PLTPAT----KVFACLFVLVGF  173 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYG-di~-p~t~~g----r~~~~~~~l~Gi  173 (388)
                      .+...+.++++++++.+++++....+..+ ....++.+|+||+++++||+||| |+. |.+..|    +.+.++.++.|+
T Consensus       147 ~l~~~~~~~~~~~~~fa~~g~~~f~~~~~-~~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~~~~~~~~f~~~~~i~~~  225 (285)
T 3rvy_A          147 GMLSVIALMTLFFYIFAIMATQLFGERFP-EWFGTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTF  225 (285)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHTTTCH-HHHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCcccc-cccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHcCChHHhhHHHHHHHHHH
Confidence            34444444455555555555544433221 22568999999999999999999 996 888766    677788888899


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 016527          174 GFIDILLSGVVNYVLDLQ  191 (388)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~  191 (388)
                      .++.+.++.+.+.+.+..
T Consensus       226 ~~lnl~~aii~~~f~~~~  243 (285)
T 3rvy_A          226 VMINLVVAICVDAMAILN  243 (285)
T ss_dssp             HHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999998888776543

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}

Probab=96.50  E-value=0.00024  Score=64.61  Aligned_cols=55  Identities=11%  Similarity=0.047  Sum_probs=37.4

Q ss_pred             CcccceeeeEeeeeccccCCCcc----CCcCcchhhHHHHHH-HHHHHHHHHHHHHHHHH
Q 016527          253 DWLDSFYLSVMSVTTVGYGDRAF----KTLPGRFFAAIWLLF-STLMVARAFLYLAEARI  307 (388)
Q Consensus       253 s~~da~y~~~iT~tTVGyGDi~p----~t~~gr~~~~~~~l~-G~~~~~~~~~~l~~~~~  307 (388)
                      ++.+|+|+.+.++||.|++|+..    .++.+.++.+.++++ +..++..+++.+.+.+.
T Consensus       165 ~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~  224 (229)
T 4dxw_A          165 DLGISLITLFQVLTLSSWETVMLPMQEIYWWSWVYFFSFIIICSITILNLVIAILVDVVI  224 (229)
T ss_dssp             SHHHHHHHHHHHHTTSSTHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHccCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999732    233344444444444 45666677777666543

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=95.11  E-value=0.027  Score=44.08  Aligned_cols=53  Identities=28%  Similarity=0.491  Sum_probs=40.8

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|. ...|...| ..+++++.++   |++.|.|+||.|+.+|-+
T Consensus        42 F~~~D~d~~G~I~~~El-~~~l~~lg~~~~~~ei~~l---~~~~D~d~dG~I~~~EF~   95 (100)
T 2lv7_A           42 FKVFDRDGNGFISKQEL-GTAMRSLGYMPNEVELEVI---IQRLDMDGDGQVDFEEFV   95 (100)
T ss_dssp             HHHTCSSCSSCBCHHHH-HHHHHHHTCCCCTTTHHHH---HHHHCSSCSSSBCHHHHH
T ss_pred             HHHHcCCCCCcCCHHHH-HHHHHHhCCCCCHHHHHHH---HHHHCCCCCCeEeHHHHH
Confidence            45678999999998885 45666665 5788888766   556799999999988753

>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}

Probab=95.05  E-value=0.0097  Score=63.50  Aligned_cols=55  Identities=20%  Similarity=0.417  Sum_probs=44.8

Q ss_pred             cccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016527          254 WLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEARIDK  309 (388)
Q Consensus       254 ~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~~~~~  309 (388)
                      +.+++||++.+++..| ++..|.+..+|++.++|+++++++.+...+.+++.+...
T Consensus       564 ~~~~~~~~~~~l~~~g-~~~~p~~~~~R~~~~~w~~~~lil~~~Yta~L~s~Lt~~  618 (823)
T 3kg2_A          564 IFNSLWFSLGAFMQQG-ADISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVE  618 (823)
T ss_dssp             HHHHHHHTTTTSCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCcCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            5689999999999999 788999999999999999999999999999999877653

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=94.76  E-value=0.04  Score=40.52  Aligned_cols=56  Identities=18%  Similarity=0.323  Sum_probs=42.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc---CCChHHHHHHHH-HhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG---KIGEKDISQICN-QFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g---~i~~e~i~~i~~-~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...|   ..+++++..+.+ -|...|.|++|.|+.++.+
T Consensus        13 F~~~D~d~~G~i~~~el-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~   72 (83)
T 1yx7_A           13 FKKLDANGDGYVTALEL-QTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFL   72 (83)
T ss_dssp             HHHHSSSCSSSCSHHHH-HHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHH
T ss_pred             HHHHCCCCCCcCcHHHH-HHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            45578899999998875 44555665   577887776333 3788899999999998865

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=94.63  E-value=0.04  Score=42.88  Aligned_cols=47  Identities=13%  Similarity=0.290  Sum_probs=34.8

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...     ..+++....+.+.|+..|.|++|.|+.+|+.
T Consensus        19 ~d~~g~i~~~ef~~~~-----~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~   65 (110)
T 1pva_A           19 VKAEGSFNHKKFFALV-----GLKAMSANDVKKVFKAIDADASGFIEEEELK   65 (110)
T ss_dssp             TCSTTCCCHHHHHHHH-----TCTTSCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             cCCCCcCcHHHHHHHH-----ccCcchHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3477888888876543     2345566777788899999999999998874

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=94.45  E-value=0.036  Score=43.04  Aligned_cols=47  Identities=15%  Similarity=0.240  Sum_probs=32.5

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...     ..+.+....+.+.|+..|.|++|.|+.+|+.
T Consensus        18 ~d~~g~i~~~eF~~~~-----~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~   64 (109)
T 1rwy_A           18 FTAADSFDHKKFFQMV-----GLKKKSADDVKKVFHILDKDKSGFIEEDELG   64 (109)
T ss_dssp             TCSTTCCCHHHHHHHH-----TGGGSCHHHHHHHHHHHSTTCSSEECHHHHH
T ss_pred             cCCCCcEeHHHHHHHH-----hcCcchHHHHHHHHHHHCCCCCCeEcHHHHH
Confidence            3477888888876543     1123455666777888888888888888864

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=94.38  E-value=0.041  Score=38.42  Aligned_cols=53  Identities=19%  Similarity=0.239  Sum_probs=37.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...| ..+++   ++..-|...|.|++|.|+.++..
T Consensus         6 F~~~D~d~~G~i~~~e~~-~~l~~~~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~   59 (66)
T 3li6_A            6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQ---LLQLIFKSIDADGNGEIDQNEFA   59 (66)
T ss_dssp             HHHHCTTCSSSCCHHHHH-HHHHHHHHHHHHH---HHHHHHHHHCTTCSSSCCHHHHH
T ss_pred             HHHHCCCCCCcccHHHHH-HHHHHccCCCcHH---HHHHHHHHHCCCCCCCCCHHHHH
Confidence            456788999999988854 3444443 23333   34556788899999999998864

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=94.29  E-value=0.062  Score=37.46  Aligned_cols=53  Identities=19%  Similarity=0.297  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| ..+++++.   .-|...|.|++|.|+.++..
T Consensus         7 F~~~D~d~~G~i~~~el~-~~l~~~~~~~~~~~~~---~~~~~~D~~~dg~i~~~ef~   60 (67)
T 1tiz_A            7 FEKFDKNKDGKLSLDEFR-EVALAFSPYFTQEDIV---KFFEEIDVDGNGELNADEFT   60 (67)
T ss_dssp             HHHHCTTSSSCEEHHHHH-HHHHHTCTTSCHHHHH---HHHHHHCCSSSSEECHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHH---HHHHHHCCCCCCcCcHHHHH
Confidence            455688999999988854 4555554 45666655   45667799999999998864

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=94.13  E-value=0.053  Score=47.00  Aligned_cols=57  Identities=25%  Similarity=0.425  Sum_probs=44.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh---cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM---GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~---g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...   ..+++++..++.+-|++.|.|+||.|+.+|..
T Consensus       127 ~F~~~D~d~~G~Is~~El~-~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~  186 (191)
T 3k21_A          127 AFRVFDVDNDGEITTAELA-HILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS  186 (191)
T ss_dssp             HHHHHSTTCSSCBCHHHHH-HHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHH-HHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHH
Confidence            3456788999999988854 344442   35788888888889999999999999998864

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=94.12  E-value=0.053  Score=45.88  Aligned_cols=52  Identities=12%  Similarity=0.082  Sum_probs=32.5

Q ss_pred             hcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       332 ~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +.+++|.++-.||+........+.......++.+.|+..|.|++|.|+.++|
T Consensus        56 d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el  107 (159)
T 3i5g_C           56 KKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEI  107 (159)
T ss_dssp             SSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHH
T ss_pred             cccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHH
Confidence            3445667777777654444444333333445567777778888888888776

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=94.03  E-value=0.086  Score=39.87  Aligned_cols=52  Identities=27%  Similarity=0.453  Sum_probs=39.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...| .+++++..   -|...|.|++|.|+.++..
T Consensus        33 F~~~D~d~~G~I~~~El-~~~l~~~g-~~~~~~~~---~~~~~D~d~dg~I~~~EF~   84 (91)
T 2pmy_A           33 FAACDANRSGRLEREEF-RALCTELR-VRPADAEA---VFQRLDADRDGAITFQEFA   84 (91)
T ss_dssp             HHHHCTTCSSSEEHHHH-HHHHHHTT-CCHHHHHH---HHHHHCTTCSSEECHHHHT
T ss_pred             HHHHCCCCCCCCcHHHH-HHHHHHcC-cCHHHHHH---HHHHhCCCCCCCEeHHHHH
Confidence            45578899999998875 45667777 67776654   4666799999999998865

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=93.96  E-value=0.094  Score=42.85  Aligned_cols=57  Identities=19%  Similarity=0.359  Sum_probs=44.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHH-HhcCCChHHHHHHHHH-hhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLK-EMGKIGEKDISQICNQ-FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~-~~g~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-. ....++++++..+.+. |+..|.|++|.|+.++..
T Consensus        81 F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~  139 (155)
T 3ll8_B           81 FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFC  139 (155)
T ss_dssp             HHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHH
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            45578899999998886543333 2467889999888776 777999999999998864

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=93.91  E-value=0.062  Score=41.66  Aligned_cols=47  Identities=13%  Similarity=0.203  Sum_probs=33.9

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...  .   .+++....+.+.|+..|.|++|.|+.+|+.
T Consensus        18 ~d~~g~i~~~eF~~~~--~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~   64 (108)
T 1rro_A           18 CQDPDTFEPQKFFQTS--G---LSKMSASQVKDIFRFIDNDQSGYLDGDELK   64 (108)
T ss_dssp             TCSTTCCCHHHHHHHH--S---GGGSCHHHHHHHHHHHCTTCSSEECTHHHH
T ss_pred             ccCCCCcCHHHHHHHH--h---cCcccHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            3478888888876543  1   223455667788888899999999998874

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=93.80  E-value=0.1  Score=39.79  Aligned_cols=53  Identities=19%  Similarity=0.491  Sum_probs=39.8

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...| ..+++++.++   |++.|.|++|.|+.++.+
T Consensus        35 F~~~D~d~~G~I~~~El-~~~l~~~g~~~~~~e~~~l---~~~~D~d~dG~I~~~EF~   88 (94)
T 2kz2_A           35 FRVEDKDGNGYISAAEL-RHVMTNLGEKLTDEEVDEM---IREADIDGDGQVNYEEFV   88 (94)
T ss_dssp             HHHHCTTCCSCBCHHHH-HHHHHHHTCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHCCCCcCcCCHHHH-HHHHHHhCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            44568899999998885 44555665 5677777765   556789999999998864

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=93.77  E-value=0.038  Score=43.22  Aligned_cols=33  Identities=24%  Similarity=0.329  Sum_probs=29.7

Q ss_pred             hcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          352 MGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       352 ~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...++++++.++.+.|+..|.|++|.|+.+||.
T Consensus        27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~   59 (100)
T 2lv7_A           27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELG   59 (100)
T ss_dssp             CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHH
Confidence            356789999999999999999999999999974

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=93.62  E-value=0.087  Score=38.97  Aligned_cols=53  Identities=25%  Similarity=0.392  Sum_probs=40.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|. ...+...|..+++++..+   |...|.|++|.|+.++..
T Consensus        17 F~~~D~d~~G~i~~~el-~~~l~~~g~~~~~~~~~~---~~~~D~~~dg~i~~~eF~   69 (86)
T 2opo_A           17 FKRFDTNGDGKISSSEL-GDALKTLGSVTPDEVRRM---MAEIDTDGDGFISFDEFT   69 (86)
T ss_dssp             HHHHCTTCSSEEEHHHH-HHHHHTTTTCCHHHHHHH---HHHHCTTCSSEECHHHHH
T ss_pred             HHHHCCCCCCCcCHHHH-HHHHHHcCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            45568899999998874 456666677777776654   566799999999998764

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=93.55  E-value=0.06  Score=41.80  Aligned_cols=46  Identities=20%  Similarity=0.151  Sum_probs=32.5

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      |++|.++..||+...-.     ..+....+.+.|+..|.|++|.|+.+|+.
T Consensus        20 D~~g~i~~~eF~~~~~~-----~~~~~~~l~~~F~~~D~d~~G~i~~~el~   65 (109)
T 3fs7_A           20 QAADSFNYKSFFSTVGL-----SSKTPDQIKKVFGILDQDKSGFIEEEELQ   65 (109)
T ss_dssp             CSTTCCCHHHHHHHHTC-----TTCCHHHHHHHHHHHSTTCSSSBCHHHHH
T ss_pred             CCCCcCcHHHHHHHHhc-----CCCcHHHHHHHHHHHCCCCCCeEeHHHHH
Confidence            47888888887654221     23445566777888888999999888874

>3pjz_A Potassium uptake protein TRKH; structural genomics, PSI-2, protein structure initiative, NE consortium on membrane protein structure; 3.51A {Vibrio parahaemolyticus}

Probab=93.55  E-value=0.053  Score=54.89  Aligned_cols=149  Identities=16%  Similarity=0.139  Sum_probs=74.6

Q ss_pred             cchhhhheeeeeeccccc--ccccCCcccchhhhhhhhhhhHHHHH--HHHHHHHHHHHHHHHHHHHHhhcccccc--Cc
Q 016527          135 VVDALYFCIVTMCTIGYG--DIAPLTPATKVFACLFVLVGFGFIDI--LLSGVVNYVLDLQENMILTGIQMGKVKE--GF  208 (388)
Q Consensus       135 ~~~a~yf~~vtltTVGYG--di~p~t~~gr~~~~~~~l~Gi~~~~~--~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~  208 (388)
                      +.++++-++...||-||.  |...-++..+.+.++.+++|=.--+.  -+....-.++-++.++.+|.....+...  ++
T Consensus       307 l~~a~Fq~vS~~TttGF~t~d~~~w~~~~~~ll~~LMfIGG~~GSTaGGIKv~r~~il~~~~~~el~~~~~P~~v~~v~~  386 (494)
T 3pjz_A          307 FDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCAGSTGGGMKVIRILLLTLQGARELKRLVHPRAVYTIKV  386 (494)
T ss_dssp             HHHHHHHHHHTTTTCCCCSCCCSSCCTHHHHHHHHHTTSCSCTTSSCCSSCHHHHHHHHHHHHHHHHHHHCSSSCCCCCS
T ss_pred             HHHHHHheeecccCCcccccChHhCCHHHHHHHHHHHHHcCCcccCCCchhHHHHHHHHHHHHHHHhcccCCCcceeeeE
Confidence            456666777777888996  44444556666777767766211000  0000001111111122222222221110  01


Q ss_pred             ccccceeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccceeeeEeeeecccc--CCCcc----CCcCcch
Q 016527          209 SARDYIVDVAKGRMRIRLKVGLALGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGY--GDRAF----KTLPGRF  282 (388)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGy--GDi~p----~t~~gr~  282 (388)
                      ..+.  +     ..+...+....+.+.++.+++++.+... .+.++.+++.=++.+++|||-  |.+-|    -++.+|+
T Consensus       387 ~~r~--i-----~~~~v~~~~~~~~ly~~~~~~~~~~l~~-~g~~~~~a~~~v~Sal~nvG~s~G~vg~~~~~L~~~~K~  458 (494)
T 3pjz_A          387 GGSA--L-----PQRVVDAVWGFFSAYALVFVVCMLGLIA-TGMDELSAFSAVAATLNNLGPGLGEVALHFGDVNDKAKW  458 (494)
T ss_dssp             SSCC--C-----TTTHHHHHHHHHHHHHHHHHHHHHHHHH-HSSCHHHHHHHHHHHTTTCCSCCSSSCCCCSSSCHHHHH
T ss_pred             CCEE--C-----CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHcCCCCcccccCCCcccCCHHHHH
Confidence            1110  0     1112223333333333344445544444 458899999999999999995  43333    3556899


Q ss_pred             hhHHHHHHH
Q 016527          283 FAAIWLLFS  291 (388)
Q Consensus       283 ~~~~~~l~G  291 (388)
                      +.++.|++|
T Consensus       459 vl~~~M~~G  467 (494)
T 3pjz_A          459 VLIVSMLFG  467 (494)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999988

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}

Probab=93.35  E-value=0.1  Score=46.91  Aligned_cols=87  Identities=7%  Similarity=0.057  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeeccccccccc----CCcccchhhhhhhhhh-h
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAP----LTPATKVFACLFVLVG-F  173 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p----~t~~gr~~~~~~~l~G-i  173 (388)
                      ..+.....++++++...+.+++.+.++..+ ....++.+|+|+.+.++|+.|++|+..    .++.+.++-+.|.++| .
T Consensus       131 ~~l~~~~~~l~~~~~ifa~~g~~lf~~~~~-~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~~~~~f~~~~~i~~~  209 (229)
T 4dxw_A          131 RRVFFVSLLLFIILYIYATMGAILFGNDDP-SRWGDLGISLITLFQVLTLSSWETVMLPMQEIYWWSWVYFFSFIIICSI  209 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTTSC-TTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCc-ccccCHHHHHHHHHHHHccCCHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence            355555555555555666665555544322 235689999999999999999999733    2334444444444433 3


Q ss_pred             HHHHHHHHHHHHH
Q 016527          174 GFIDILLSGVVNY  186 (388)
Q Consensus       174 ~~~~~~~~~~~~~  186 (388)
                      .++.+.++.+.+.
T Consensus       210 i~lNlfiavi~~~  222 (229)
T 4dxw_A          210 TILNLVIAILVDV  222 (229)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            4444555544443

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=93.35  E-value=0.063  Score=41.68  Aligned_cols=47  Identities=15%  Similarity=0.140  Sum_probs=30.7

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...-     ..++....+.+.|+..|.|++|.|+.+|+.
T Consensus        19 ~d~~g~i~~~eF~~~~~-----~~~~~~~~l~~~F~~~D~d~~G~I~~~el~   65 (109)
T 1bu3_A           19 CEAADSFNYKAFFAKVG-----LTAKSADDIKKAFFVIDQDKSGFIEEDELK   65 (109)
T ss_dssp             TCSTTCCCHHHHHHHHT-----GGGSCHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred             hCCCCcCcHHHHHHHHH-----cChhhHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            34677788777764321     123445566677777888888888887764

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=93.30  E-value=0.11  Score=37.55  Aligned_cols=53  Identities=23%  Similarity=0.406  Sum_probs=40.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+ ...+...|..+++++..+   |...|.|++|.|+.++..
T Consensus         9 F~~~D~~~~G~i~~~el-~~~l~~~g~~~~~~~~~~---~~~~D~~~dg~i~~~ef~   61 (78)
T 1k9u_A            9 FKRFDTNGDGKISLSEL-TDALRTLGSTSADEVQRM---MAEIDTDGDGFIDFNEFI   61 (78)
T ss_dssp             HHHHCTTCSSEECHHHH-HHHHHHHHTCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HHHHCCCCCCcCcHHHH-HHHHHHhCCCCHHHHHHH---HHHhCCCCCCeEcHHHHH
Confidence            34568889999998875 455666667777777654   667799999999998764

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=93.28  E-value=0.039  Score=45.18  Aligned_cols=53  Identities=9%  Similarity=0.115  Sum_probs=36.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc--CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG--KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g--~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...|  .++++++..+.   +..|.|++|.|+.++..
T Consensus        46 F~~~D~d~~G~I~~~el-~~~l~~~g~~~~~~~e~~~~~---~~~D~d~dG~I~~~EF~  100 (135)
T 3h4s_E           46 FSLLADPERHLITAESL-RRNSGILGIEGMSKEDAQGMV---REGDLDGDGALNQTEFC  100 (135)
T ss_dssp             HHHHSBTTTTBBCHHHH-HHHGGGGTCCCCCHHHHHHHH---HHHCSSCSSSBCHHHHH
T ss_pred             HHHHCCCCCCcCCHHHH-HHHHHHhCCCCCCHHHHHHHH---HHhCCCCCCCCcHHHHH
Confidence            44567788888887764 45556666  67787776554   45578888888887754

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=93.25  E-value=0.083  Score=40.88  Aligned_cols=47  Identities=15%  Similarity=0.249  Sum_probs=32.3

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...  ..   .+.....+.+.|+..|.|++|.|+.+|+.
T Consensus        18 ~d~~g~i~~~eF~~~~--~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~   64 (108)
T 2pvb_A           18 CSAADSFKHKEFFAKV--GL---ASKSLDDVKKAFYVIDQDKSGFIEEDELK   64 (108)
T ss_dssp             TCSTTCCCHHHHHHHH--TG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             hCCCCcCcHHHHHHHH--hC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHH
Confidence            3467888888876542  11   23445566777888888888888888874

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=93.21  E-value=0.11  Score=40.32  Aligned_cols=47  Identities=19%  Similarity=0.243  Sum_probs=30.3

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...-     ...+...++.+.|+..|.|++|.|+.+|+.
T Consensus        18 ~d~~g~i~~~eF~~~~~-----~~~~~~~~l~~~F~~~D~d~~G~i~~~el~   64 (109)
T 5pal_A           18 FKDPGTFDYKRFFHLVG-----LKGKTDAQVKEVFEILDKDQSGFIEEEELK   64 (109)
T ss_dssp             TCSTTCCCHHHHHHHHT-----CTTCCHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             hCCCCcCcHHHHHHHHh-----hccCcHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            34477788777764321     123344556677777888888888887764

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=93.18  E-value=0.093  Score=45.84  Aligned_cols=56  Identities=18%  Similarity=0.373  Sum_probs=44.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh--cCCChHHHHHHHHH-hhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM--GKIGEKDISQICNQ-FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~--g~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...  ..++++++..+.++ |+..|.|+||.|+.++..
T Consensus       119 F~~~D~d~dG~Is~~El~-~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~  177 (208)
T 2ct9_A          119 FRLYDLDKDDKISRDELL-QVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV  177 (208)
T ss_dssp             HHHHCTTCSSEECHHHHH-HHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHH
T ss_pred             HHHHCCCCCCEEcHHHHH-HHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            456788999999988864 445443  46889999887555 899999999999998864

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=93.13  E-value=0.083  Score=43.47  Aligned_cols=51  Identities=14%  Similarity=0.110  Sum_probs=28.4

Q ss_pred             hcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       332 ~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      |.+.+|.++..||+......... .......+.+.|+..|.|++|.|+.+++
T Consensus        56 D~~~~g~i~~~eF~~~~~~~~~~-~~~~~~~l~~~F~~~D~d~~G~I~~~el  106 (156)
T 1wdc_C           56 HKMGEKSLPFEEFLPAYEGLMDC-EQGTFADYMEAFKTFDREGQGFISGAEL  106 (156)
T ss_dssp             SSTTSCEECHHHHHHHHHHHTTS-CCCCHHHHHHHHHTTCSSSSSEEEHHHH
T ss_pred             CCCCCCeeeHHHHHHHHHHHhhc-cCChHHHHHHHHHHhCCCCCCcCcHHHH
Confidence            45566667766665544433321 1222334455666667777777776665

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=93.04  E-value=0.053  Score=45.03  Aligned_cols=57  Identities=18%  Similarity=0.284  Sum_probs=41.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh---------cCCChHHHHHHHHH-hhhcCCCCCCccChhhhcc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM---------GKIGEKDISQICNQ-FNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~---------g~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~~  385 (388)
                      +...|.|.+|.++..|+.. .+...         ..++++++.++.++ |++.|.|+||.|+.++...
T Consensus        74 F~~~D~d~dG~I~~~El~~-~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~  140 (143)
T 3a4u_B           74 FKMHDYDGNNLLDGLELST-AITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAK  140 (143)
T ss_dssp             HHHTCTTCSSCEEHHHHHH-TCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC
T ss_pred             HHHhCCCCCCccCHHHHHH-HHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHH
Confidence            5567889999999888643 33333         36888998877644 6999999999999998753

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=93.02  E-value=0.12  Score=39.65  Aligned_cols=53  Identities=23%  Similarity=0.412  Sum_probs=39.3

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.|++|.++..|. ...+...| .+++++.++   ++..|.|++|.|+.++..
T Consensus        15 ~F~~~D~d~dG~I~~~el-~~~l~~~g-~~~~~~~~i---~~~~D~d~dG~i~~~EF~   67 (95)
T 1c07_A           15 IFLKTDKDMDGFVSGLEV-REIFLKTG-LPSTLLAHI---WSLCDTKDCGKLSKDQFA   67 (95)
T ss_dssp             HHHHHCTTCSSEECHHHH-HHHHHTTT-CCHHHHHHH---HHHHCTTCSSSEETTTHH
T ss_pred             HHHHhCCCCCCcEeHHHH-HHHHHHcC-CCHHHHHHH---HHHHCCCCCCcCCHHHHH
Confidence            345678899999998774 45566665 677777665   456799999999988753

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=93.01  E-value=0.083  Score=45.82  Aligned_cols=57  Identities=21%  Similarity=0.445  Sum_probs=44.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-c-CCChHHHHHHHHH-hhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-G-KIGEKDISQICNQ-FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g-~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+... | .++++++..+.++ |++.|.|+||.|+.++..
T Consensus       119 ~F~~~D~d~dG~Is~~El~-~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~  178 (202)
T 2bec_A          119 AFQLYDLDRDGKISRHEML-QVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFT  178 (202)
T ss_dssp             HHHHHCTTCSSEECHHHHH-HHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHH
T ss_pred             HHHHhCCCCCCeEcHHHHH-HHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHH
Confidence            3456788999999988864 455555 4 5789999888775 777999999999998865

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=92.98  E-value=0.11  Score=42.48  Aligned_cols=54  Identities=19%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+ ...+...| .++++++.++.   ++.|.|++|.|+.++..
T Consensus        84 ~F~~~D~d~~G~I~~~el-~~~l~~~g~~~~~~~~~~~~---~~~D~d~dG~I~~~eF~  138 (143)
T 2obh_A           84 AFKLFDDDETGKISFKNL-KRVAKELGENLTDEELQEMI---DEADRDGDGEVSEQEFL  138 (143)
T ss_dssp             HHHHHCTTCSSSBCHHHH-HHHHHHTTCCCCHHHHHHHH---HHHCTTSSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHH-HHHHHHhCCCCCHHHHHHHH---HHhCCCCCCcEeHHHHH
Confidence            445667888888887774 44555655 56777777654   55688889998888754

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=92.97  E-value=0.051  Score=42.13  Aligned_cols=47  Identities=21%  Similarity=0.263  Sum_probs=34.7

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+|.++..||+...  .   ...+....+.+.|+..|.|++|.|+.+|+.
T Consensus        18 ~d~~g~i~~~eF~~~~--~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~   64 (108)
T 2kyc_A           18 CQAPDSFSPKKFFQIS--G---MSKKSSSQLKEIFRILDNDQSGFIEEDELK   64 (108)
T ss_dssp             SCSTTTCCHHHHHHHH--T---CTTCCSSSHHHHCSSSCSCCSSCCCGGGTT
T ss_pred             cCCCCcCCHHHHHHHH--h---hCcccHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            4478889988886543  1   223444566788999999999999999875

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=92.92  E-value=0.19  Score=40.75  Aligned_cols=56  Identities=18%  Similarity=0.320  Sum_probs=39.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChH--HHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEK--DISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e--~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+............+  ....+...|+..|.|++|.|+.+|+.
T Consensus        54 ~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~  111 (153)
T 3ox6_A           54 QQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELR  111 (153)
T ss_dssp             HHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            345778889999888876654444333322  24566778888899999999988874

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=92.89  E-value=0.062  Score=43.39  Aligned_cols=50  Identities=14%  Similarity=0.174  Sum_probs=23.1

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +.+|.++..||+...........++....+...|+..|.|++|.|+.+++
T Consensus        49 ~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el   98 (140)
T 1ggw_A           49 TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGEL   98 (140)
T ss_dssp             TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHH
T ss_pred             CCCCcCcHHHHHHHHHHHhcccCcccHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            44555555555433222222222223334445555555555555555554

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=92.88  E-value=0.13  Score=39.17  Aligned_cols=52  Identities=21%  Similarity=0.251  Sum_probs=39.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|. ...+...| .+++++.++   ++..|.|++|.|+.++.+
T Consensus        15 F~~~D~d~dG~I~~~el-~~~l~~~g-~~~~~~~~i---~~~~D~d~dG~i~~~EF~   66 (92)
T 1fi6_A           15 FKTIQPDLNGFIPGSAA-KEFFTKSK-LPILELSHI---WELSDFDKDGALTLDEFC   66 (92)
T ss_dssp             HTTTCCSTTCEEEHHHH-HHHHHHHS-SCHHHHHHH---HHHHCTTCSSEEEHHHHH
T ss_pred             HHHHCCCCCCcCcHHHH-HHHHHHcC-CCHHHHHHH---HHHHCCCCCCCCCHHHHH
Confidence            45578899999998774 45566665 777777765   456799999999988753

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=92.88  E-value=0.11  Score=46.10  Aligned_cols=56  Identities=13%  Similarity=0.322  Sum_probs=43.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc------CCChHHHHHHHH-HhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG------KIGEKDISQICN-QFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g------~i~~e~i~~i~~-~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|.+|.++..|+. ..+...+      .++++++.++.+ -|.+.|.|+||.|+.+|..
T Consensus       135 F~~~D~d~dG~Is~~El~-~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~  197 (214)
T 2l4h_A          135 FRIFDFDDDGTLNREDLS-RLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ  197 (214)
T ss_dssp             HHHHCTTCSSCBCHHHHH-HHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHH
T ss_pred             HHHhCCCCCCcCCHHHHH-HHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            456789999999988854 3444443      688898887554 4899999999999998864

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=92.80  E-value=0.16  Score=43.29  Aligned_cols=56  Identities=16%  Similarity=0.084  Sum_probs=32.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHh------cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEM------GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~------g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|.+|.++..|++.......      .......-..+...|+..|.|++|.|+.+++.
T Consensus        71 ~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~  132 (191)
T 2ccm_A           71 KYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYS  132 (191)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHH
T ss_pred             HhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            345677778888777765433221      11122223445566777777777777776653

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=92.68  E-value=0.15  Score=42.96  Aligned_cols=57  Identities=21%  Similarity=0.243  Sum_probs=39.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcC------CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGK------IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~------i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..|+..........      ..+..-..+...|+..|.|++|.|+.+++.
T Consensus        66 f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~  128 (185)
T 2sas_A           66 KGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ  128 (185)
T ss_dssp             HHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHH
T ss_pred             HHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHH
Confidence            345678889999999987654433221      112233556777899999999999998874

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=92.62  E-value=0.15  Score=42.94  Aligned_cols=56  Identities=20%  Similarity=0.293  Sum_probs=43.2

Q ss_pred             hhhh-hcCCCCccchhHHHHHHHHHhc-----CCChHHHHHHHHH--------hhhcCCCCCCccChhhhc
Q 016527          328 LLAA-DMNHNGFISKSEYVIFKLKEMG-----KIGEKDISQICNQ--------FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~-~~d~~~~~~~~e~~~~~L~~~g-----~i~~e~i~~i~~~--------F~~ld~~~~g~l~~~d~~  384 (388)
                      +... |.|++|.++..|+.. .+...+     ..+++++..+...        |...|.|++|.|+.++..
T Consensus        14 F~~~~D~d~dG~i~~~E~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~   83 (185)
T 2sas_A           14 FDFFLDMNHDGSIQDNDFED-MMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYL   83 (185)
T ss_dssp             HHHHTCTTCSSEECHHHHHH-HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHheeCCCCCeEcHHHHHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHH
Confidence            4557 889999999888643 333333     7788888877644        999999999999999864

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=92.51  E-value=0.073  Score=40.63  Aligned_cols=30  Identities=23%  Similarity=0.287  Sum_probs=27.5

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++..++.+.|+.+|.|++|.|+.+|+.
T Consensus         3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~   32 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAK   32 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            578899999999999999999999999875

>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}

Probab=92.50  E-value=0.071  Score=56.72  Aligned_cols=55  Identities=13%  Similarity=0.331  Sum_probs=44.9

Q ss_pred             CcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Q 016527          134 PVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYVLD  189 (388)
Q Consensus       134 s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~~~  189 (388)
                      ++.+++||++.+++..| ++..|.+..+|++..+|.++++.+.+...+.+.+++..
T Consensus       563 ~~~~~~~~~~~~l~~~g-~~~~p~~~~~R~~~~~w~~~~lil~~~Yta~L~s~Lt~  617 (823)
T 3kg2_A          563 GIFNSLWFSLGAFMQQG-ADISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV  617 (823)
T ss_dssp             HHHHHHHHTTTTSCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhcC-CCcCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            36789999999999999 78899999999999999999999999999999988864

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=92.50  E-value=0.15  Score=36.67  Aligned_cols=53  Identities=25%  Similarity=0.364  Sum_probs=38.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...|. .+++++.   .-|...|.|++|.|+.++..
T Consensus        13 F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~---~~~~~~d~~~~g~i~~~eF~   66 (77)
T 2joj_A           13 FDLFDTNKTGSIDYHELK-VAMRALGFDVKKPEIL---ELMNEYDREGNGYIGFDDFL   66 (77)
T ss_dssp             HHHHCCSSSSEEEHHHHH-HHHHHHTCCCHHHHHH---HHHHHHCCSSSSEEEHHHHH
T ss_pred             HHHhCCCCCCCCcHHHHH-HHHHHhCCCCCHHHHH---HHHHHHCCCCCCcCcHHHHH
Confidence            455688999999988854 45555554 4555555   45667799999999998864

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=92.47  E-value=0.14  Score=42.58  Aligned_cols=54  Identities=19%  Similarity=0.335  Sum_probs=40.9

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus       106 ~F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  160 (169)
T 3qrx_A          106 AFRLFDDDNSGTITIKDLR-RVAKELGENLTEEELQEM---IAEADRNDDNEIDEDEFI  160 (169)
T ss_dssp             HHHHHCTTCSSSBCHHHHH-HHHHHTTCCCCHHHHHHH---HHHHCCSSSSCBCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHH-HHHHHcCCCCCHHHHHHH---HHHhCCCCCCCEeHHHHH
Confidence            3566788999999988864 4455554 6778887765   666789999999998864

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=92.45  E-value=0.077  Score=44.52  Aligned_cols=62  Identities=18%  Similarity=0.148  Sum_probs=33.6

Q ss_pred             hhccchhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          320 QREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       320 ~~~~t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +...+..++..+..+.++.++-.+|+............  -..+.+.|+..|.|++|.|+.++|
T Consensus        46 g~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~--~~~l~~aF~~fD~d~~G~I~~~el  107 (153)
T 3i5g_B           46 GRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDP--EDALRNAFSMFDEDGQGFIPEDYL  107 (153)
T ss_dssp             TSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCC--HHHHHHHHHTTCSSCSSCCCHHHH
T ss_pred             CCCccHHHHHHHHHhccCCccHHHHHHHHHhhhccccc--HHHHHHHHhccccCCCCeEeHHHH
Confidence            34445555555555555556655554433222222221  134556677777777777777776

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=92.42  E-value=0.19  Score=41.35  Aligned_cols=54  Identities=22%  Similarity=0.435  Sum_probs=40.5

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|.. ..|... ...+++++..+   |+..|.|+||.|+.++-+
T Consensus        88 aF~~~D~d~~G~I~~~El~-~~l~~~g~~~~~~e~~~l---~~~~D~d~dG~I~~~EF~  142 (148)
T 2lmt_A           88 AFKIFDRDGDGFISPAELR-FVMINLGEKVTDEEIDEM---IREADFDGDGMINYEEFV  142 (148)
T ss_dssp             HHHHHHSSCSSEECHHHHH-HHHHHHTCCCCHHHHHHH---HHHHCCSCCSSEEHHHHH
T ss_pred             HHHHHCCCCcCcCcHHHHH-HHHHHcCccccHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            3566789999999988854 445544 56778877765   556699999999988753

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=92.38  E-value=0.15  Score=41.70  Aligned_cols=54  Identities=20%  Similarity=0.431  Sum_probs=35.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.+++|.++..|+. ..+...| .++++++..+.   ++.|.|++|.|+.++.+
T Consensus        88 ~F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~~---~~~d~d~dg~i~~~eF~  142 (148)
T 1exr_A           88 AFKVFDRDGNGLISAAELR-HVMTNLGEKLTDDEVDEMI---READIDGDGHINYEEFV  142 (148)
T ss_dssp             HHHHHSTTCSSCBCHHHHH-HHHHHTTCCCCHHHHHHHH---HHHCSSSSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHH-HHHHHhCCCCCHHHHHHHH---HHhCCCCCCcEeHHHHH
Confidence            4455677778888777643 4444444 46677766554   44577888888877653

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=92.33  E-value=0.22  Score=36.77  Aligned_cols=55  Identities=13%  Similarity=0.100  Sum_probs=40.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|. ...|...| ..++++...+.+-|.+.|.|++|.|+. +..
T Consensus        20 F~~~D~d~~G~I~~~el-~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~   75 (86)
T 1j7q_A           20 FDIFDRNAENIAPVSDT-MDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWL   75 (86)
T ss_dssp             HHHHSTTTTSCBCHHHH-HHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHH
T ss_pred             HHHhCCCCCCcCcHHHH-HHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHH
Confidence            34568889999998775 45666666 456777344556677889999999998 754

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=92.20  E-value=0.18  Score=43.77  Aligned_cols=57  Identities=25%  Similarity=0.352  Sum_probs=43.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHH---HH-hcCCChHHHHHHH-HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKL---KE-MGKIGEKDISQIC-NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L---~~-~g~i~~e~i~~i~-~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-   .. ...++++++..+. +-|+..|.|++|.|+.++..
T Consensus       117 F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  178 (207)
T 2ehb_A          117 FKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK  178 (207)
T ss_dssp             HHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3557889999999988654321   23 3478888888765 56899999999999998864

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=92.17  E-value=0.18  Score=39.19  Aligned_cols=53  Identities=13%  Similarity=0.228  Sum_probs=39.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|. ...+...| ++++++.++   ++..|.|++|.|+.++..
T Consensus        16 ~F~~~D~d~dG~Is~~el-~~~l~~~~-l~~~~l~~i---~~~~D~d~dG~i~~~EF~   68 (99)
T 1qjt_A           16 YYRQVEAGNTGRVLALDA-AAFLKKSG-LPDLILGKI---WDLADTDGKGVLSKQEFF   68 (99)
T ss_dssp             HHHHHCCTTSSCCCSHHH-HHHHHTSS-SCHHHHHHH---HHHHCCSSSSSCCSHHHH
T ss_pred             HHHHHCCCCCCcCCHHHH-HHHHHHcC-CCHHHHHHH---HHHHCCCCCCcCCHHHHH
Confidence            345678899999998874 44555554 777777665   456799999999998753

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=92.14  E-value=0.16  Score=40.88  Aligned_cols=52  Identities=15%  Similarity=0.340  Sum_probs=30.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+ ...+...| .++++++..+.+   ..| |++|.|+.++..
T Consensus        85 F~~~D~d~~G~i~~~el-~~~l~~~g~~~~~~~~~~~~~---~~d-~~dg~i~~~eF~  137 (142)
T 2bl0_C           85 FRTFDPEGTGYIPKAAL-QDALLNLGDRLKPHEFAEFLG---ITE-TEKGQIRYDNFI  137 (142)
T ss_dssp             HHHTCCSSCSCEEHHHH-HHHHHHSSSCCCHHHHHHHHH---HHC-CSSSEECSHHHH
T ss_pred             HHHHCCCCCCcCcHHHH-HHHHHHcCCCCCHHHHHHHHH---HhC-CCCCcEeHHHHH
Confidence            34456677777776664 33444444 456666554433   345 677777776654

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=92.02  E-value=0.19  Score=40.94  Aligned_cols=54  Identities=19%  Similarity=0.364  Sum_probs=40.5

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++-.||+.........  ......+.+.|+..|.|++|.|+.+++.
T Consensus        49 ~~~d~~~~g~i~~~eF~~~~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~  102 (143)
T 2obh_A           49 SEIDKEGTGKMNFGDFLTVMTQKMSE--KDTKEEILKAFKLFDDDETGKISFKNLK  102 (143)
T ss_dssp             HHHTTTCCSEEEHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHhCCCCCCeeeHHHHHHHHHHHhcc--ccHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            34678889999999988765433321  2334567788999999999999999874

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=91.99  E-value=0.11  Score=42.72  Aligned_cols=54  Identities=22%  Similarity=0.334  Sum_probs=39.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...+.+++|.++..|++............+  ..+.+.|+..|.|++|.|+.++|.
T Consensus        53 ~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~--~~l~~aF~~~D~d~~G~I~~~El~  106 (148)
T 2lmt_A           53 AEAENNNNGQLNFTEFCGIMAKQMRETDTE--EEMREAFKIFDRDGDGFISPAELR  106 (148)
T ss_dssp             HHHHTTSTTEEEHHHHHHHHHHTTTTTTTH--HHHHHHHHHHHSSCSSEECHHHHH
T ss_pred             HhcccCCCCcccHHHHHHHHHHHhcccCcH--HHHHHHHHHHCCCCcCcCcHHHHH
Confidence            346778888899888876555444433322  245677999999999999999974

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=91.99  E-value=0.061  Score=44.66  Aligned_cols=59  Identities=8%  Similarity=-0.028  Sum_probs=21.3

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhcC--CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMGK--IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g~--i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..+..+|.|.+|.++..|+..........  .....-+.+.+.|+..|.|++|.|+.+|+.
T Consensus        31 ~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~   91 (143)
T 3a4u_B           31 SQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELS   91 (143)
T ss_dssp             --------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHH
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHH
Confidence            34566788999999999976443222110  011122455667999999999999999985

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=91.96  E-value=0.085  Score=40.54  Aligned_cols=30  Identities=10%  Similarity=0.121  Sum_probs=27.3

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++..++.+.|+.+|.|+||.|+.+|+.
T Consensus         4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~   33 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVR   33 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            467889999999999999999999999875

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=91.88  E-value=0.26  Score=41.01  Aligned_cols=56  Identities=14%  Similarity=0.178  Sum_probs=40.4

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCCh---H--HHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGE---K--DISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~---e--~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+............   +  .-..+...|+..|.|++|.|+.+++.
T Consensus        65 ~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~  125 (176)
T 1nya_A           65 KEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFA  125 (176)
T ss_dssp             HHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHH
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence            34678889999999987665554444432   1  12446677999999999999999874

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=91.85  E-value=0.17  Score=44.99  Aligned_cols=57  Identities=23%  Similarity=0.351  Sum_probs=43.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHH---HHh-cCCChHHHHHHH-HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKL---KEM-GKIGEKDISQIC-NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L---~~~-g~i~~e~i~~i~-~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-   ... ..++++++..+. +-|+..|.|+||.|+.++..
T Consensus       128 F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~  189 (226)
T 2zfd_A          128 FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWR  189 (226)
T ss_dssp             HHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHH
T ss_pred             HHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            4557889999999888654321   233 467888888775 55899999999999998864

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=91.84  E-value=0.27  Score=40.42  Aligned_cols=53  Identities=23%  Similarity=0.315  Sum_probs=41.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+ ...+...| ++++++..+   |+..|.|++|.|+.++..
T Consensus       103 ~F~~~D~d~~G~i~~~E~-~~~l~~~~-~~~~~~~~~---~~~~D~d~dg~i~~~ef~  155 (166)
T 3akb_A          103 ALGVADTDGDGAVTVADT-ARALTAFG-VPEDLARQA---AAALDTDGDGKVGETEIV  155 (166)
T ss_dssp             HHHHHCSSSSSCCBHHHH-HHHHHHTT-CCHHHHHHH---HHHHCTTCSSBCCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHH-HHHHHHhC-CCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            345678899999998886 45666777 888887755   555689999999998864

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=91.83  E-value=0.19  Score=40.97  Aligned_cols=54  Identities=19%  Similarity=0.178  Sum_probs=27.9

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..+|.|++|.++..||+........  ......++.+.|+..|.|++|.|+.+|+.
T Consensus        10 ~~~D~d~~G~I~~~EF~~~~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~   63 (135)
T 3h4s_E           10 LETTSTTKMETKYEDMLPVMAEKMD--VEEFVSELCKGFSLLADPERHLITAESLR   63 (135)
T ss_dssp             ---------CCCC-----------C--HHHHHHHHHHHHHHHSBTTTTBBCHHHHH
T ss_pred             HHHcCCCCCcEeHHHHHHHHHHHcc--ccchHHHHHHHHHHHCCCCCCcCCHHHHH
Confidence            4567888999999998765444332  34556778889999999999999999874

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=91.81  E-value=0.27  Score=39.71  Aligned_cols=55  Identities=25%  Similarity=0.350  Sum_probs=40.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHH-HhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLK-EMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~-~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+....-. ....++++++..+   |+..|.|++|.|+.++..
T Consensus        93 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~---~~~~d~~~dg~i~~~eF~  148 (153)
T 3ox6_A           93 AFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI---IRDVDLNGDGRVDFEEFV  148 (153)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHH---HHHHCSSSSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            345678899999999886543333 2345788887766   455689999999998865

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=91.77  E-value=0.28  Score=40.21  Aligned_cols=59  Identities=14%  Similarity=0.142  Sum_probs=30.7

Q ss_pred             cchhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          323 ITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       323 ~t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .+..++..+..+.+|.++..||+............  ...+...|+..|.|++|.|+.+++
T Consensus        51 ~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~--~~~l~~~F~~~D~d~~G~I~~~el  109 (156)
T 1wdc_B           51 PDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDS--EETIRNAFAMFDEQETKKLNIEYI  109 (156)
T ss_dssp             CCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCC--HHHHHHHHHTTCTTCCSCEEHHHH
T ss_pred             CCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCCh--HHHHHHHHHHHCcCCCCccCHHHH
Confidence            34444444444456666666665444333222221  223445566667777777776665

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=91.76  E-value=0.25  Score=41.20  Aligned_cols=57  Identities=12%  Similarity=0.231  Sum_probs=43.6

Q ss_pred             hhhhhcCCCCccchhHHHHH---HHHHhc-CCChHHHHHHH--------HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIF---KLKEMG-KIGEKDISQIC--------NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~---~L~~~g-~i~~e~i~~i~--------~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+...   .+...| ..+++++..+.        .-|...|.|++|.|+.++..
T Consensus        13 F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~   81 (176)
T 1nya_A           13 FDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI   81 (176)
T ss_dssp             HHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred             HHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            45578899999999987553   455555 55677777655        67889999999999998864

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=91.72  E-value=0.24  Score=36.93  Aligned_cols=53  Identities=21%  Similarity=0.366  Sum_probs=39.1

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+ ...+...| ..+++++..+   |...|.|++|.|+.++..
T Consensus        26 F~~~D~d~~G~i~~~el-~~~l~~~g~~~~~~~~~~l---~~~~D~~~dg~i~~~eF~   79 (90)
T 1avs_A           26 FDMFDADGGGDISTKEL-GTVMRMLGQNPTKEELDAI---IEEVDEDGSGTIDFEEFL   79 (90)
T ss_dssp             HHHHCTTCSSEECHHHH-HHHHHHTTCCCCHHHHHHH---HHHHCTTCCSSEEHHHHH
T ss_pred             HHHHCCCCCCcCcHHHH-HHHHHHhCCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            45568899999998875 45555555 4667777655   566689999999998764

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=91.62  E-value=0.17  Score=43.19  Aligned_cols=53  Identities=21%  Similarity=0.233  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| ++++++.   +-|+..|.|+||.|+.++..
T Consensus       114 ~F~~~D~d~dG~I~~~E~~-~~l~~~g-~~~~~~~---~~~~~~D~d~dG~i~~~Ef~  166 (191)
T 2ccm_A          114 MFDVNDTSGDNIIDKHEYS-TVYMSYG-IPKSDCD---AAFDTLSDGGKTMVTREIFA  166 (191)
T ss_dssp             HHHHHCTTCSSBCCHHHHH-HHHHTTT-CCHHHHH---HHHHHHTTTTTSCCBHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHH-HHHHHhC-CCHHHHH---HHHHHhCCCCCCCcCHHHHH
Confidence            3456789999999988864 4555666 7777766   45677799999999998875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=91.62  E-value=0.047  Score=44.69  Aligned_cols=53  Identities=21%  Similarity=0.362  Sum_probs=33.4

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..+...| .++++++..+   |+..| |++|.|+.++..
T Consensus        92 ~F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~---~~~~d-~~dg~i~~~eF~  145 (151)
T 1w7j_B           92 GFRVFDKEGNGKVMGAELR-HVLTTLGEKMTEEEVETV---LAGHE-DSNGCINYEAFL  145 (151)
T ss_dssp             HHHTTCTTSSSEEEHHHHH-HHHHHSSSCCCHHHHHHH---HTTCC-CTTSEEEHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHH-HHHHHcCCCCCHHHHHHH---HHhcc-CCCCeEeHHHHH
Confidence            4455677777877777653 4455554 4566666554   44557 788888777654

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=91.61  E-value=0.25  Score=42.91  Aligned_cols=55  Identities=15%  Similarity=0.153  Sum_probs=36.6

Q ss_pred             hhhhcCCCCccchhHHHHHHHH--------HhcCCChHHHHH-HHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLK--------EMGKIGEKDISQ-ICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~--------~~g~i~~e~i~~-i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+.....        .... .++...+ +...|+..|.|++|.|+.+|+.
T Consensus        88 ~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~F~~~D~d~~G~Is~~El~  151 (208)
T 2hpk_A           88 LHKGVEPVNGLLREDWVEANRVFAEAERERERRG-EPSLIALLSNSYYDVLDDDGDGTVDVDELK  151 (208)
T ss_dssp             HHTTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHHhhhhhhhhccC-ChHHHHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            4467788888998888765431        2211 2222333 5677888899999999888874

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=91.59  E-value=0.13  Score=44.49  Aligned_cols=56  Identities=13%  Similarity=0.040  Sum_probs=41.4

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhc--------------CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMG--------------KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g--------------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+........              .........+...|+..|.|++|.|+.+|+.
T Consensus        68 ~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~  137 (202)
T 2bec_A           68 ESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEML  137 (202)
T ss_dssp             HTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            3467888999999998764433221              0134556677889999999999999999974

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=91.55  E-value=0.21  Score=41.46  Aligned_cols=54  Identities=28%  Similarity=0.450  Sum_probs=39.6

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..||+.........  ......+.+.|+..|.|++|.|+.+|+.
T Consensus        71 ~~~d~~~~g~i~~~eF~~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~i~~~el~  124 (169)
T 3qrx_A           71 SEIDKDGSGTIDFEEFLTMMTAKMGE--RDSREEILKAFRLFDDDNSGTITIKDLR  124 (169)
T ss_dssp             HHHCSSSSSSEEHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHhcCCCCCcCCHHHHHHHHHHHhcc--cCcHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            34577889999999987655443321  2334566778999999999999999874

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=91.49  E-value=0.19  Score=40.96  Aligned_cols=54  Identities=19%  Similarity=0.116  Sum_probs=39.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..||+.........  ......+...|+..|.|++|.|+.+|+.
T Consensus        45 ~~~D~~~~g~i~~~ef~~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~i~~~e~~   98 (155)
T 3ll8_B           45 DIFDTDGNGEVDFKEFIEGVSQFSVK--GDKEQKLRFAFRIYDMDKDGYISNGELF   98 (155)
T ss_dssp             HHHCTTCSSSBCHHHHHHHHGGGCSS--CCHHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             HHHCCCCCCcCcHHHHHHHHHHHccc--CCHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            44677889999999987654432222  2333566788999999999999999874

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=91.47  E-value=0.14  Score=44.62  Aligned_cols=55  Identities=13%  Similarity=0.019  Sum_probs=39.3

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCCh-------------HHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGE-------------KDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~-------------e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|.++-.||+............             .....+...|+..|.|++|.|+.+|+.
T Consensus        69 ~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~  136 (208)
T 2ct9_A           69 AFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELL  136 (208)
T ss_dssp             TTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHH
Confidence            3467788999999987644432221111             256677888999999999999999974

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=91.47  E-value=0.25  Score=36.39  Aligned_cols=55  Identities=22%  Similarity=0.366  Sum_probs=40.4

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhcc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~~  385 (388)
                      -+...|.+++|.++..|+ ...+...| ..+++++..+   |...|.|++|.|+.++.+.
T Consensus        28 ~F~~~D~d~~G~i~~~el-~~~l~~~~~~~~~~~~~~l---~~~~d~~~~g~i~~~eF~~   83 (87)
T 1s6j_A           28 LFKMIDTDNSGTITFDEL-KDGLKRVGSELMESEIKDL---MDAADIDKSGTIDYGEFIA   83 (87)
T ss_dssp             HHHHHCTTCSSCEEHHHH-HHHHHTTTSSCCHHHHHHH---HHHHCTTCSSEECHHHHTT
T ss_pred             HHHHHCCCCCCcCcHHHH-HHHHHHhCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHHH
Confidence            345678899999998885 44555555 5677776654   5666899999999988653

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=91.39  E-value=0.24  Score=40.78  Aligned_cols=57  Identities=19%  Similarity=0.251  Sum_probs=43.3

Q ss_pred             hhhhhcCCCCccchhHHHHHH---HHHhc-CCChHHHHHHH--------HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFK---LKEMG-KIGEKDISQIC--------NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~---L~~~g-~i~~e~i~~i~--------~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....   +...| ..+++++..+.        +-|...|.|++|.|+.++..
T Consensus        10 F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~   78 (166)
T 3akb_A           10 FTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFV   78 (166)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHH
T ss_pred             HhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            345788999999998865532   33434 56778887775        66899999999999998865

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=91.35  E-value=0.21  Score=40.24  Aligned_cols=52  Identities=19%  Similarity=0.404  Sum_probs=39.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+.. .+... ..++++++..+.+.+   | |++|.|+.++..
T Consensus        90 F~~~D~d~~G~i~~~e~~~-~l~~~~~~~~~~~~~~~~~~~---d-~~dg~i~~~eF~  142 (147)
T 4ds7_A           90 FKVFDKNGDGLISAAELKH-VLTSIGEKLTDAEVDEMLREV---S-DGSGEINIKQFA  142 (147)
T ss_dssp             HHHHCTTCSSEECHHHHHH-HHHHTTCCCCHHHHHHHHHHH---S-SSCSSEEHHHHH
T ss_pred             HHHhCCCCCCeECHHHHHH-HHHHcCCCCCHHHHHHHHHHh---c-CCCCcCcHHHHH
Confidence            5567889999999988654 44444 467888888766655   7 999999998865

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=91.35  E-value=0.23  Score=40.84  Aligned_cols=54  Identities=22%  Similarity=0.391  Sum_probs=28.6

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+++|.++..||+......... ........+...|+..|.|++|.|+.+++.
T Consensus        64 ~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~  118 (161)
T 1dtl_A           64 VDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELK  118 (161)
T ss_dssp             HCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHG
T ss_pred             hCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            455666667666665544333210 012233345566666677777777766653

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=91.22  E-value=0.24  Score=39.92  Aligned_cols=52  Identities=21%  Similarity=0.381  Sum_probs=32.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| .++++++..+   |+. |.|++|.|+.++..
T Consensus        91 F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~~~---~~~-d~~~dg~i~~~eF~  143 (149)
T 2mys_C           91 LRVFDKEGNGTVMGAELR-HVLATLGEKMTEEEVEEL---MKG-QEDSNGCINYEAFV  143 (149)
T ss_pred             HHHhCCCCCceEcHHHHH-HHHHHhCCCCCHHHHHHH---Hhh-CCCCCCcEeHHHHH
Confidence            345567777777777654 3444444 4566666554   445 77788888777654

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=91.20  E-value=0.16  Score=40.94  Aligned_cols=53  Identities=15%  Similarity=0.367  Sum_probs=39.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus        82 F~~~D~d~~G~I~~~El~-~~l~~~g~~~~~~~~~~~---~~~~D~d~dg~i~~~eF~  135 (143)
T 3j04_B           82 FACFDEEASGFIHEDHLR-ELLTTMGDRFTDEEVDEM---YREAPIDKKGNFNYVEFT  135 (143)
T ss_dssp             HTTSCSSSCCCCCTTTHH-HHHHTSSSCCCHHHHHHH---HHHTTCCSSSCCCSTHHH
T ss_pred             HHHHCCCCCCeEcHHHHH-HHHHHcCCCCCHHHHHHH---HHHcCCCCCCcCcHHHHH
Confidence            455788899999988854 4444444 5677777655   556699999999998864

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=91.18  E-value=0.21  Score=41.49  Aligned_cols=54  Identities=19%  Similarity=0.281  Sum_probs=40.4

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| .++++++..+.   ...|.|++|.|+.++..
T Consensus       100 ~F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~~---~~~D~d~dg~I~~~eF~  154 (166)
T 2mys_B          100 AFKVLDPDGKGSIKKSFLE-ELLTTGGGRFTPEEIKNMW---AAFPPDVAGNVDYKNIC  154 (166)
T ss_pred             HHHHhCCCCCcceeHHHHH-HHHHHcCCCCCHHHHHHHH---HhcCCCCCCeEeHHHHH
Confidence            3456788999999988864 4444554 57888877665   55699999999998864

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=91.15  E-value=0.26  Score=38.00  Aligned_cols=53  Identities=21%  Similarity=0.339  Sum_probs=39.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|.. ..+...    ..++++++..+   |+..|.|++|.|+.++..
T Consensus        47 F~~~D~d~~G~i~~~el~-~~l~~~~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  103 (109)
T 5pal_A           47 FEILDKDQSGFIEEEELK-GVLKGFSAHGRDLNDTETKAL---LAAGDSDHDGKIGADEFA  103 (109)
T ss_dssp             HHHHCTTCSSEECHHHHH-THHHHHCTTCCCCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHH-HHHHHHHHcCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            355688999999988753 445553    46677777655   556689999999998864

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=91.10  E-value=0.3  Score=36.46  Aligned_cols=53  Identities=23%  Similarity=0.496  Sum_probs=39.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+ ...+...| ..+++++..+   |...|.|++|.|+.++.+
T Consensus        15 F~~~D~d~~G~i~~~el-~~~l~~~g~~~~~~~~~~l---~~~~d~~~dg~i~~~eF~   68 (92)
T 2kn2_A           15 FKVFDKDQNGYISASEL-RHVMINLGEKLTDEEVEQM---IKEADLDGDGQVNYEEFV   68 (92)
T ss_dssp             HHHHCTTCSSEECHHHH-HHHHHHTTCCCCHHHHHHH---HHHHCSSCCSSEEHHHHH
T ss_pred             HHHHCCCCCCeEcHHHH-HHHHHHhCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            44568889999998875 45566665 4677777655   556789999999998764

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=91.03  E-value=0.32  Score=37.31  Aligned_cols=54  Identities=19%  Similarity=0.348  Sum_probs=40.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..|...| ..+++++..+   |...|.|++|.|+.++..
T Consensus        29 ~F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~e~~~l---~~~~d~~~~g~i~~~eF~   83 (105)
T 1wlz_A           29 EFENFDTMKTNTISREEFR-AICNRRVQILTDEQFDRL---WNEMPVNAKGRLKYPDFL   83 (105)
T ss_dssp             HHHHHCTTCSSCBCHHHHH-HHHHHHTCCCCHHHHHHH---HTTSCBCTTSCBCHHHHH
T ss_pred             HHHHHCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHHH---HHHcCCCCCCCCcHHHHH
Confidence            3456788999999988854 4555555 5677777654   567799999999998864

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A

Probab=91.01  E-value=0.28  Score=34.97  Aligned_cols=53  Identities=19%  Similarity=0.423  Sum_probs=37.6

Q ss_pred             hhhh-hcCCC-CccchhHHHHHHHHHhc-CC--ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAA-DMNHN-GFISKSEYVIFKLKEMG-KI--GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~-~~d~~-~~~~~~e~~~~~L~~~g-~i--~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +... |.+++ |.++..|.. ..+...| ..  +++++..+   |...|.|++|.|+.++..
T Consensus        11 F~~~~D~d~~~G~i~~~el~-~~l~~~g~~~~~~~~~~~~l---~~~~D~~~~g~i~~~eF~   68 (76)
T 1qx2_A           11 FEVFAAKEGDPNQISKEELK-LVMQTLGPSLLKGMSTLDEM---IEEVDKNGDGEVSFEEFL   68 (76)
T ss_dssp             HHHHHTSSSCTTSEEHHHHH-HHHHHHGGGSCTTSCSHHHH---HHHHCTTCSSEECHHHHH
T ss_pred             HHHHcccCCCcCeECHHHHH-HHHHHhCCCcCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            3455 78888 999988754 4555554 45  67776655   555689999999998764

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=90.99  E-value=0.3  Score=42.37  Aligned_cols=53  Identities=17%  Similarity=0.302  Sum_probs=41.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+ ...+...| ++++++..+   |...|.|+||.|+.++..
T Consensus       133 ~F~~~D~d~~G~Is~~El-~~~l~~~g-~~~~~~~~~---~~~~D~d~dG~I~~~EF~  185 (208)
T 2hpk_A          133 YYDVLDDDGDGTVDVDEL-KTMMKAFD-VPQEAAYTF---FEKADTDKSGKLERTELV  185 (208)
T ss_dssp             HHHHHCTTCSSSBCHHHH-HHHHHHTT-SCTTHHHHH---HHHHCTTCCSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHH-HHHHHHhC-cCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            345678899999998886 45667778 888887755   556689999999998864

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=90.96  E-value=0.24  Score=41.66  Aligned_cols=54  Identities=19%  Similarity=0.469  Sum_probs=33.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus        89 ~F~~~D~d~~G~I~~~E~~-~~l~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  143 (179)
T 2f2o_A           89 AFRVFDKDGNGYISAAELR-HVMTNLGEKLTDEEVDEM---IREADIDGDGQVNYEEFV  143 (179)
T ss_dssp             HHHHHCTTCSSEECHHHHH-HHHHHC--CCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHHH---HHHcCCCCCCcCcHHHHH
Confidence            3455677777877776653 3344443 4566666554   444577888888877654

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=90.95  E-value=0.21  Score=39.55  Aligned_cols=52  Identities=17%  Similarity=0.292  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|.. ..+. ....+++++..+   |+..|.|+||.|+.++.+
T Consensus        20 F~~~D~d~dG~I~~~El~-~~l~-~~~~~~~~~~~i---~~~~D~d~dG~I~~~EF~   71 (111)
T 2kgr_A           20 FNSHDKTMSGHLTGPQAR-TILM-QSSLPQAQLASI---WNLSDIDQDGKLTAEEFI   71 (111)
T ss_dssp             HHTTSCSSCCEEEHHHHH-HHHH-TTCCCHHHHHHH---HHHHCSSCCSEEEHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHH-HHHH-hCCCCHHHHHHH---HHHHCCCCCCCCcHHHHH
Confidence            455688899999988753 3333 456778777765   566799999999998754

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=90.95  E-value=0.13  Score=36.29  Aligned_cols=53  Identities=15%  Similarity=0.338  Sum_probs=37.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| ..+++++.   .-|...|.|++|.|+.++..
T Consensus        12 F~~~D~d~~G~i~~~el~-~~l~~~~~~~~~~~~~---~~~~~~d~~~~g~i~~~eF~   65 (71)
T 2b1u_A           12 FRAFDQDGDGHITVDELR-RAMAGLGQPLPQEELD---AMIREADVDQDGRVNYEEFA   65 (71)
T ss_dssp             HTTSCCSSSSEEEHHHHH-HHGGGTTCSSCHHHHH---HHHHHCCSSSSSEEETTHHH
T ss_pred             HHHHCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHH---HHHHHhCCCCCCcCcHHHHH
Confidence            345678899999988753 4555554 45666655   45667799999999998764

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=90.93  E-value=0.21  Score=42.56  Aligned_cols=55  Identities=20%  Similarity=0.257  Sum_probs=37.3

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .-+...|.|++|.++..|+. ..+...| .++++++.++   |+..|.|++|.|+.++..
T Consensus       117 ~~F~~~D~d~~G~I~~~El~-~~l~~~g~~~~~~~~~~~---~~~~D~d~dg~i~~~eF~  172 (195)
T 1qv0_A          117 AVFDIFDKDGSGTITLDEWK-AYGKISGISPSQEDCEAT---FRHCDLDNAGDLDVDEMT  172 (195)
T ss_dssp             HHHHHTC----CEECHHHHH-HHHHHHSSCCCHHHHHHH---HHHSCCCTTSCEEHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHHH---HHHhCCCCCCcCCHHHHH
Confidence            34567789999999988864 4455555 4677776655   667799999999998864

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=90.93  E-value=0.039  Score=40.98  Aligned_cols=45  Identities=24%  Similarity=0.466  Sum_probs=34.5

Q ss_pred             CCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          335 HNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       335 ~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+|.++..|.+     ....++++++.++.+.|...|.|++|.|+.+|+.
T Consensus         2 ~~G~i~~~e~~-----~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~   46 (87)
T 1s6j_A            2 SSGHIDDDDKH-----MAERLSEEEIGGLKELFKMIDTDNSGTITFDELK   46 (87)
T ss_dssp             CSSSSSSHHHH-----SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHH
T ss_pred             CCCccCccHHH-----HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            46777766622     1345667777888899999999999999999875

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=90.90  E-value=0.32  Score=39.05  Aligned_cols=63  Identities=17%  Similarity=0.111  Sum_probs=42.9

Q ss_pred             hhccchhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          320 QREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       320 ~~~~t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...+..++..+....+|.++-.||+...........  ....+...|+..|.|++|.|+.+++.
T Consensus        37 g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~--~~~~l~~~F~~~D~d~~G~I~~~El~   99 (143)
T 3j04_B           37 GKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTD--PEDVIRNAFACFDEEASGFIHEDHLR   99 (143)
T ss_dssp             SCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSC--CHHHHHHHHTTSCSSSCCCCCTTTHH
T ss_pred             CCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCC--cHHHHHHHHHHHCCCCCCeEcHHHHH
Confidence            3345555555554447888998888765554333322  23456678999999999999999874

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=90.85  E-value=0.33  Score=40.40  Aligned_cols=53  Identities=26%  Similarity=0.424  Sum_probs=40.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| ++++++..+   |+..|.|++|.|+.++..
T Consensus        99 ~F~~~D~d~~G~i~~~e~~-~~l~~~g-~~~~~~~~~---~~~~D~d~dg~i~~~ef~  151 (174)
T 1q80_A           99 FFRAVDTNEDNNISRDEYG-IFFGMLG-LDKTMAPAS---FDAIDTNNDGLLSLEEFV  151 (174)
T ss_dssp             HHHHHCTTSSSSBCHHHHH-HHHHHHT-CCGGGHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcccHHHHH-HHHHHcC-CCHHHHHHH---HHHhCCCCCceEeHHHHH
Confidence            4456788999999988854 4555555 788877765   455689999999998864

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=90.76  E-value=0.29  Score=40.15  Aligned_cols=54  Identities=31%  Similarity=0.484  Sum_probs=40.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+.. .+...| .++++++..+   |...|.|++|.|+.++..
T Consensus       101 ~F~~~D~d~~G~I~~~e~~~-~l~~~g~~~~~~~~~~~---~~~~d~~~dg~i~~~eF~  155 (162)
T 1top_A          101 CFRIFDKNADGFIDIEELGE-ILRATGEHVTEEDIEDL---MKDSDKNNDGRIDFDEFL  155 (162)
T ss_dssp             HHHHHCTTCSSCBCHHHHHH-HHHTTTCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHH-HHHHhCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            34567889999999888653 444444 5777777655   556689999999998864

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=90.76  E-value=0.3  Score=40.62  Aligned_cols=44  Identities=16%  Similarity=0.300  Sum_probs=26.0

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.+.+|.++..||+...-.         ...+.+.|+..|.|++|.|+.+++
T Consensus        49 ~D~~~~g~i~~~eF~~~~~~---------~~~~~~~F~~~D~d~~G~i~~~el   92 (165)
T 1k94_A           49 LDRDHTGKMGFNAFKELWAA---------LNAWKENFMTVDQDGSGTVEHHEL   92 (165)
T ss_dssp             HCTTCSSCBCHHHHHHHHHH---------HHHHHHHHHHHCTTCCSBCCHHHH
T ss_pred             hCCCCCCcCCHHHHHHHHHH---------HHHHHHHHHHhCCCCCceECHHHH
Confidence            45566666666666543221         134556666667777777776665

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=90.75  E-value=0.25  Score=40.46  Aligned_cols=54  Identities=20%  Similarity=0.365  Sum_probs=33.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.+|..
T Consensus       101 ~F~~~D~d~~G~i~~~el~-~~l~~~~~~~~~~~~~~~---~~~~d~~~~g~i~~~eF~  155 (161)
T 3fwb_A          101 AFQLFDDDHTGKISIKNLR-RVAKELGETLTDEELRAM---IEEFDLDGDGEINENEFI  155 (161)
T ss_dssp             HHHHHCTTCSSEECHHHHH-HHHHHTTCCCCHHHHHHH---HHTTCSSSSSSEEHHHHH
T ss_pred             HHHHHcCCCCCeEeHHHHH-HHHHHhCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            3455667777777777653 3344443 4566665544   555577778888777654

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=90.73  E-value=0.27  Score=41.59  Aligned_cols=55  Identities=20%  Similarity=0.299  Sum_probs=41.1

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .-+...|.|++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus       113 ~~F~~~D~d~~G~Is~~El~-~~l~~~g~~~~~~~~~~~---~~~~D~d~dG~i~~~eF~  168 (191)
T 1uhk_A          113 ALFDIVDKDQNGAITLDEWK-AYTKAAGIIQSSEDCEET---FRVCDIDESGQLDVDEMT  168 (191)
T ss_dssp             HHHHHHCTTCSSEECHHHHH-HHHHHHTSCCSHHHHHHH---HHHSCCCTTSCEEHHHHH
T ss_pred             HHHHHhcCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            34567789999999988864 4555555 4677776654   666799999999998864

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=90.72  E-value=0.12  Score=44.78  Aligned_cols=52  Identities=25%  Similarity=0.365  Sum_probs=36.8

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+....... ...+   ..+...|+..|.|++|.|+.+|+.
T Consensus        94 ~~~D~d~~g~i~~~EF~~~~~~~~-~~~~---~~l~~~F~~~D~d~~G~Is~~El~  145 (191)
T 3k21_A           94 DQIDSDGSGKIDYTEFIAAALDRK-QLSK---KLIYCAFRVFDVDNDGEITTAELA  145 (191)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHSCGG-GCCH---HHHHHHHHHHSTTCSSCBCHHHHH
T ss_pred             HHhCCCCCCeEeHHHHHHHHHhhh-hccH---HHHHHHHHHhCCCCCCcCCHHHHH
Confidence            345778888888888876543222 2333   345577889999999999999874

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=90.71  E-value=0.13  Score=43.69  Aligned_cols=51  Identities=18%  Similarity=0.322  Sum_probs=27.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|++|.++..|+.. .+. ...++++++..+   |+..|.|++|.|+.+|..
T Consensus       130 ~~~D~d~~G~I~~~E~~~-~l~-~~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  180 (191)
T 3khe_A          130 QQFDSDGSGKITNEELGR-LFG-VTEVDDETWHQV---LQECDKNNDGEVDFEEFV  180 (191)
T ss_dssp             HHHCTTCSSEECHHHHHH-HTT-SSCCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HHHCCCCcCcCCHHHHHH-HHc-cCCCCHHHHHHH---HHHhCCCCCCCCCHHHHH
Confidence            345566666666665432 222 344555555443   444466667777666543

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=90.67  E-value=0.12  Score=40.69  Aligned_cols=55  Identities=22%  Similarity=0.263  Sum_probs=30.6

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+++|.++..|+...............-.++...|+..|.|++|.|+.+|+.
T Consensus        44 ~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~   98 (134)
T 1jfj_A           44 SIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVT   98 (134)
T ss_dssp             HHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHH
T ss_pred             HHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHH
Confidence            3466777777777765322100011122233345666777777777777777764

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=90.65  E-value=0.2  Score=42.36  Aligned_cols=53  Identities=19%  Similarity=0.186  Sum_probs=39.0

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|+...........++   ..+...|+..|.|++|.|+.+++.
T Consensus        63 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~---~~~~~~f~~~D~d~~G~i~~~e~~  115 (183)
T 1s6c_A           63 NAFDTTQTGSVKFEDFVTALSILLRGTVH---EKLRWTFNLYDINKDGYINKEEMM  115 (183)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHHHHCCHH---HHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHhCCCCCCcEeHHHHHHHHHHHcCCCHH---HHHHHHHHHhCCCCCCeEcHHHHH
Confidence            45678899999999987654433333333   345577889999999999999874

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=90.61  E-value=0.32  Score=41.17  Aligned_cols=52  Identities=12%  Similarity=0.015  Sum_probs=39.0

Q ss_pred             hhcCCCCc-cchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          331 ADMNHNGF-ISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       331 ~~~d~~~~-~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+.+|. ++..||+............  -..+...|+..|.|++|.|+.+++.
T Consensus        69 ~D~d~~G~~I~~~EF~~~~~~~~~~~~~--~~~l~~~F~~~D~d~~G~I~~~El~  121 (183)
T 1dgu_A           69 FSTSPAKDSLSFEDFLDLLSVFSDTATP--DIKSHYAFRIFDFDDDGTLNREDLS  121 (183)
T ss_dssp             HSCSSSSCCCCHHHHHHHHHHHSTTCCH--HHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             hCCCCCCCEecHHHHHHHHHHhcCCCCH--HHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            47788999 9999988766544433222  2456678999999999999999874

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=90.58  E-value=0.22  Score=42.92  Aligned_cols=53  Identities=25%  Similarity=0.268  Sum_probs=38.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|+....-......++   ..+...|+..|.|++|.|+.+++.
T Consensus        59 ~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~---~~~~~~F~~~D~d~~G~I~~~Ef~  111 (198)
T 2r2i_A           59 ETFDFNKDGYIDFMEYVAALSLVLKGKVD---QKLRWYFKLYDVDGNGCIDRGELL  111 (198)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHHSSCCHH---HHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHCCCCCCeEcHHHHHHHHHHHccCchH---HHHHHHHHHhcCCCCCcCcHHHHH
Confidence            44678899999999986544333333333   345567889999999999999874

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=90.56  E-value=0.24  Score=40.58  Aligned_cols=54  Identities=19%  Similarity=0.288  Sum_probs=41.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+...........  ....+...|+..|.|++|.|+.+|+.
T Consensus        66 ~~~d~~~~g~i~~~eF~~~~~~~~~~~~--~~~~~~~~F~~~D~d~~G~i~~~el~  119 (161)
T 3fwb_A           66 DEYDSEGRHLMKYDDFYIVMGEKILKRD--PLDEIKRAFQLFDDDHTGKISIKNLR  119 (161)
T ss_dssp             HHHCTTSSSCEEHHHHHHHHHHHHHTCC--HHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhCcCCCCeEeHHHHHHHHHHHHhcCC--cHHHHHHHHHHHcCCCCCeEeHHHHH
Confidence            4457888999999999877665444333  33456678999999999999999875

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=90.53  E-value=0.3  Score=42.19  Aligned_cols=53  Identities=26%  Similarity=0.188  Sum_probs=38.8

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|++|.++..|+....-......++++   +...|+..|.|++|.|+.+|+.
T Consensus        66 ~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~E~~  118 (204)
T 1jba_A           66 RAFDTNGDNTIDFLEYVAALNLVLRGTLEHK---LKWTFKIYDKDRNGCIDRQELL  118 (204)
T ss_dssp             HHHCCSSSSEECHHHHHHHHHHHSSCCCTHH---HHHHHHHHCSSCSSCBCHHHHH
T ss_pred             HHHcCCCCCeEeHHHHHHHHHHHccCCHHHH---HHHHHHHhCCCCCCcCcHHHHH
Confidence            4467888999999988765444433344444   4567888899999999999874

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=90.53  E-value=0.37  Score=39.21  Aligned_cols=55  Identities=20%  Similarity=0.372  Sum_probs=40.7

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..||+.........  ......+.+.|+..|.|++|.|+.+++.
T Consensus        52 ~~~~d~~~~g~i~~~eF~~~~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~  106 (148)
T 1exr_A           52 INEVDADGNGTIDFPEFLSLMARKMKE--QDSEEELIEAFKVFDRDGNGLISAAELR  106 (148)
T ss_dssp             HHHHCTTCSSSEEHHHHHHHHHHHHHH--HHHHHHHHHHHHHHSTTCSSCBCHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHHHHHHhcccC--CCcHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            345678889999999987655443322  2334566788999999999999999874

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=90.50  E-value=0.14  Score=36.71  Aligned_cols=30  Identities=27%  Similarity=0.475  Sum_probs=26.8

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++...+.+.|...|.|++|.|+.+|+.
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~   30 (77)
T 2joj_A            1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELK   30 (77)
T ss_dssp             CCHHHHHHHHHHHHHHCCSSSSEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence            367888999999999999999999999874

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=90.49  E-value=0.3  Score=40.78  Aligned_cols=46  Identities=15%  Similarity=0.251  Sum_probs=29.1

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|.++..||+.....         ...+.+.|+..|.|++|.|+.+++.
T Consensus        50 ~~D~~~~g~i~~~eF~~~~~~---------~~~~~~~F~~~D~d~~G~i~~~el~   95 (167)
T 1gjy_A           50 MLDRDMSGTMGFNEFKELWAV---------LNGWRQHFISFDSDRSGTVDPQELQ   95 (167)
T ss_dssp             HHCTTCCSCBCHHHHHHHHHH---------HHHHHHHHHHHCTTCCSEECHHHHH
T ss_pred             HHCCCCCCcCCHHHHHHHHHH---------HHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            345666777777776543322         2455666777777777777777763

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=90.48  E-value=0.14  Score=37.79  Aligned_cols=31  Identities=16%  Similarity=0.308  Sum_probs=27.8

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++++++.++.+.|+..|.|++|.|+.+|+.
T Consensus         7 ~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~   37 (86)
T 1j7q_A            7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTM   37 (86)
T ss_dssp             CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            4578889999999999999999999999974

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=90.47  E-value=0.24  Score=42.46  Aligned_cols=51  Identities=20%  Similarity=0.428  Sum_probs=39.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +...|.|++|.++..|. ...|... ..++++++.++.+.+   | |+||.|+.++-
T Consensus        90 F~~fD~d~~G~I~~~el-~~~l~~~g~~~~~~ei~~l~~~~---d-d~dG~I~~~EF  141 (176)
T 2lhi_A           90 FKVFDKNGDGLISAAEL-KHVLTSIGEKLTDAEVDDMLREV---S-DGSGEINIQQF  141 (176)
T ss_dssp             HHHHCSSCSSSBCHHHH-HHHHHTTTCCCCHHHHHHHHHHH---H-TTSSCBCTTHH
T ss_pred             HHHhCCCCCCcCcHHHH-HHHHHHcCcccchHHHHHHHHhh---c-CCCCeEeHHHH
Confidence            45568899999998885 4455554 468899998887765   6 79999998874

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=90.47  E-value=0.23  Score=39.93  Aligned_cols=53  Identities=19%  Similarity=0.351  Sum_probs=39.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus        82 F~~~D~d~~G~i~~~e~~-~~l~~~g~~~~~~~~~~~---~~~~d~~~dg~i~~~eF~  135 (145)
T 2bl0_B           82 FRALDKEGNGTIQEAELR-QLLLNLGDALTSSEVEEL---MKEVSVSGDGAINYESFV  135 (145)
T ss_dssp             HHHHCSSSSSEEEHHHHH-HHHHHSSSCCCHHHHHHH---HTTCCCCTTSEEEHHHHH
T ss_pred             HHHhCCCCCCeEcHHHHH-HHHHHcCCCCCHHHHHHH---HHHcCCCCCCcEeHHHHH
Confidence            455688999999988854 4555555 4677776654   667799999999998864

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=90.46  E-value=0.14  Score=37.82  Aligned_cols=32  Identities=31%  Similarity=0.394  Sum_probs=27.0

Q ss_pred             cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          353 GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       353 g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...++++...+.+.|+..|.|++|.|+.+|+.
T Consensus         3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~   34 (86)
T 2opo_A            3 AEDTPQDIADRERIFKRFDTNGDGKISSSELG   34 (86)
T ss_dssp             ---CHHHHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             ccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence            35678899999999999999999999999874

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=90.43  E-value=0.29  Score=38.63  Aligned_cols=51  Identities=16%  Similarity=0.185  Sum_probs=37.8

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|. .||.++..| +...+...| .+++++.++   ++..|.|+||.|+.++-+
T Consensus        21 F~~~D~-~dG~Is~~e-l~~~l~~~g-l~~~el~~i---~~~~D~d~dG~id~~EF~   71 (106)
T 1eh2_A           21 FDSLSP-VNGFLSGDK-VKPVLLNSK-LPVDILGRV---WELSDIDHDGMLDRDEFA   71 (106)
T ss_dssp             HTTSCC-SSSCCBHHH-HHHHHHTTT-CCHHHHHHH---HHHHCSSCSSBCCHHHHH
T ss_pred             HHHhCC-CCCeEcHHH-HHHHHHHcC-CCHHHHHHH---HHHHcCCCCCcCcHHHHH
Confidence            344566 899999877 455666665 788877766   556899999999998753

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=90.43  E-value=0.34  Score=37.29  Aligned_cols=54  Identities=22%  Similarity=0.318  Sum_probs=39.5

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+ ...+...    ...+++++..+   |+..|.|++|.|+.++..
T Consensus        46 ~F~~~D~d~~G~I~~~el-~~~l~~~~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  103 (109)
T 1rwy_A           46 VFHILDKDKSGFIEEDEL-GSILKGFSSDARDLSAKETKTL---MAAGDKDGDGKIGVEEFS  103 (109)
T ss_dssp             HHHHHSTTCSSEECHHHH-HTHHHHHCTTCCCCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HHHHHCCCCCCeEcHHHH-HHHHHHHhccCCCCCHHHHHHH---HHHHCCCCCCcCCHHHHH
Confidence            345578899999998875 4455555    35778877655   455689999999998864

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=90.35  E-value=0.37  Score=39.44  Aligned_cols=54  Identities=19%  Similarity=0.428  Sum_probs=40.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus        96 ~F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~---~~~~D~d~dg~i~~~eF~  150 (158)
T 2jnf_A           96 AFRLYDKEGNGYISTDVMR-EILAELDETLSSEDLDAM---IDEIDADGSGTVDFEEFM  150 (158)
T ss_dssp             HHHHHCSSSSSSEEHHHHH-HHHHHHCTTCCHHHHHHH---HHHHCSSCCSEECSHHHH
T ss_pred             HHHHhCCCCCCeEcHHHHH-HHHHHhCCcCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            3456788999999988864 4445554 5778777765   556689999999998864

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=90.35  E-value=0.32  Score=41.83  Aligned_cols=54  Identities=17%  Similarity=0.347  Sum_probs=31.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus        98 ~F~~~D~d~~G~i~~~e~~-~~l~~~g~~~~~~~~~~~---~~~~D~d~dg~i~~~eF~  152 (191)
T 1y1x_A           98 GFRKRDSSGDGRLDSNEVR-AALLSSGYQVSEQTFQAL---MRKFDRQRRGSLGFDDYV  152 (191)
T ss_dssp             HHHHHCTTSSSCBCHHHHH-HHHHTTSCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHhCCCCCCeEcHHHHH-HHHHHhCCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            3345566777777766643 3333333 3555555543   445577788888877654

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=90.33  E-value=0.16  Score=43.06  Aligned_cols=56  Identities=14%  Similarity=0.331  Sum_probs=42.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc------CCChHHHHHHH-HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG------KIGEKDISQIC-NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g------~i~~e~i~~i~-~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...+      .++++++..+. +-|...|.|++|.|+.++..
T Consensus       104 F~~~D~d~~G~I~~~El~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~  166 (183)
T 1dgu_A          104 FRIFDFDDDGTLNREDLS-RLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ  166 (183)
T ss_dssp             HHHHCTTCSSEEEHHHHH-HHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHH
T ss_pred             HHHhCCCCCCcCCHHHHH-HHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            455788999999988754 4455554      47788877644 34888999999999998864

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=90.25  E-value=0.38  Score=37.02  Aligned_cols=54  Identities=17%  Similarity=0.345  Sum_probs=39.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh---c-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM---G-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~---g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+ ...+...   | ..+++++..+   |+..|.|++|.|+.++..
T Consensus        47 ~F~~~D~d~~G~I~~~el-~~~l~~~~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  104 (109)
T 1bu3_A           47 AFFVIDQDKSGFIEEDEL-KLFLQVFSAGARALTDAETKAF---LKAGDSDGDGAIGVDEWA  104 (109)
T ss_dssp             HHHHHCTTCSSSEEHHHH-HTHHHHHSTTCCCCCHHHHHHH---HHHHCTTCSSEECHHHHH
T ss_pred             HHHHHCCCCCCcCcHHHH-HHHHHHHcccCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            345568899999998875 4555555   3 4778877755   455689999999998864

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=90.24  E-value=0.26  Score=43.16  Aligned_cols=53  Identities=25%  Similarity=0.289  Sum_probs=38.8

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|++..........++   ..+...|+..|.|++|.|+.+|+.
T Consensus        64 ~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~---~~l~~~F~~~D~d~~G~I~~~E~~  116 (211)
T 2ggz_A           64 NTFDTNKDGFVDFLEFIAAVNLIMQEKME---QKLKWYFKLYDADGNGSIDKNELL  116 (211)
T ss_dssp             HHHCTTCSSEEEHHHHHHHHHHHSCSSHH---HHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHcCCCCCeEeHHHHHHHHHHhccCchH---HHHHHHHHHhcCCCCCcCcHHHHH
Confidence            44678899999999987654433332223   345677999999999999999975

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=90.22  E-value=0.08  Score=43.08  Aligned_cols=50  Identities=14%  Similarity=0.223  Sum_probs=31.8

Q ss_pred             hcCCCCccchhHHHHHHHHH------hcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          332 DMNHNGFISKSEYVIFKLKE------MGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       332 ~~d~~~~~~~~e~~~~~L~~------~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      |.+.+|.++..||+......      ......   ..+...|+..|.|++|.|+.+++.
T Consensus        51 D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~---~~~~~~F~~~D~d~~G~I~~~el~  106 (148)
T 1m45_A           51 SLRDASSLTLDQITGLIEVNEKELDATTKAKT---EDFVKAFQVFDKESTGKVSVGDLR  106 (148)
T ss_dssp             CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCT---HHHHHHHHTTCSSSSSEEEHHHHH
T ss_pred             CCCCCCeEcHHHHHHHHHHHHhhccccccccH---HHHHHHHHHhCCCCCCcCCHHHHH
Confidence            66778888888876554433      222222   345567888888888888888764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=90.21  E-value=0.26  Score=43.79  Aligned_cols=53  Identities=19%  Similarity=0.192  Sum_probs=38.8

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|++|.++..|+....-......+++   .+...|+..|.|++|.|+.+++.
T Consensus        96 ~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~---~l~~~F~~~D~d~dG~Is~~E~~  148 (224)
T 1s1e_A           96 NAFDTTQTGSVKFEDFVTALSILLRGTVHE---KLRWTFNLYDINKDGYINKEEMM  148 (224)
T ss_dssp             HHHCTTCSSCBCHHHHHHHHHHHHHCCHHH---HHHHHHHHHCTTCCSEECHHHHH
T ss_pred             HHhcCCCCCcEeHHHHHHHHHHHccCCHHH---HHHHHHHHHcCCCCCeECHHHHH
Confidence            456788999999999876544433333333   44567888999999999999874

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=90.18  E-value=0.35  Score=38.79  Aligned_cols=54  Identities=20%  Similarity=0.296  Sum_probs=39.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+.........  ...-..+.+.|+..|.|++|.|+.+|+.
T Consensus        54 ~~~d~~~~g~i~~~ef~~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~i~~~e~~  107 (147)
T 4ds7_A           54 NEIDVDGNHAIEFSEFLALMSRQLKC--NDSEQELLEAFKVFDKNGDGLISAAELK  107 (147)
T ss_dssp             HHHCTTSSSEEEHHHHHHHHHHHHHT--HHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhccCCCCcCcHHHHHHHHHHhccC--CCcHHHHHHHHHHhCCCCCCeECHHHHH
Confidence            34577889999999987655443222  2333456677999999999999999874

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=90.07  E-value=0.32  Score=41.81  Aligned_cols=52  Identities=23%  Similarity=0.294  Sum_probs=36.0

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+++|.++..||+....   ....+.....+...|+..|.|++|.|+.+|+.
T Consensus        81 ~~D~d~dg~i~~~ef~~~~~---~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~  132 (204)
T 3e3r_A           81 KWDRNGSGTLDLEEFLRALR---PPMSQAREAVIAAAFAKLDRSGDGVVTVDDLR  132 (204)
T ss_dssp             HHCTTCSSSBCHHHHHHHTS---CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HhccCCCCcCcHHHHHHHHH---hhcCchHHHHHHHHHHHhCcCCCCeEeHHHHH
Confidence            34667788888777754321   22334445567788899999999999988875

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=90.02  E-value=0.32  Score=41.96  Aligned_cols=44  Identities=16%  Similarity=0.277  Sum_probs=25.1

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.+.+|.++..||+.....         ...+.+.|+..|.|++|.|+.+|+
T Consensus        82 ~D~d~~g~i~~~eF~~~~~~---------~~~~~~~F~~~D~d~~G~I~~~el  125 (198)
T 1juo_A           82 LDRDMSGTMGFNEFKELWAV---------LNGWRQHFISFDTDRSGTVDPQEL  125 (198)
T ss_dssp             HCTTCSSCEEHHHHHHHHHH---------HHHHHHHHHTTCTTCCSEECHHHH
T ss_pred             hCCCCCCeECHHHHHHHHHH---------HHHHHHHHHHhCCCCCCcCCHHHH
Confidence            45556666666665543221         134555666666666666666665

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=90.00  E-value=0.27  Score=39.81  Aligned_cols=54  Identities=15%  Similarity=0.415  Sum_probs=39.9

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus        88 ~F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~---~~~~d~d~dg~i~~~eF~  142 (148)
T 1m45_A           88 AFQVFDKESTGKVSVGDLR-YMLTGLGEKLTDAEVDEL---LKGVEVDSNGEIDYKKFI  142 (148)
T ss_dssp             HHHTTCSSSSSEEEHHHHH-HHHHHSTTCCCHHHHHHH---HTTCCCCTTSEEEHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHH-HHHHHcCCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            3455788999999988754 4455555 5677777654   667799999999998864

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=89.93  E-value=0.35  Score=37.44  Aligned_cols=53  Identities=19%  Similarity=0.349  Sum_probs=39.1

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...| ..+++++..+   |...|.|++|.|+.++..
T Consensus        38 F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~l---~~~~D~d~dg~i~~~eF~   91 (107)
T 2d58_A           38 YMEFDLNGNGDIDIMSLK-RMLEKLGVPKTHLELKKL---IGEVSSGSGETFSYPDFL   91 (107)
T ss_dssp             HTTSCCCTTSCEEHHHHH-HHHHHTTCCCCHHHHHHH---HHHHCSSSSSEECHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHHH---HHHhCCCCCCeEcHHHHH
Confidence            345688899999988854 5566665 4577777655   556699999999998764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=89.90  E-value=0.16  Score=50.62  Aligned_cols=53  Identities=23%  Similarity=0.387  Sum_probs=38.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|.||.++..||+..........+++   .+.+.|+..|.|+||.|+.+|+.
T Consensus       388 ~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~---~~~~~F~~~D~d~dG~Is~~El~  440 (486)
T 3mwu_A          388 PLLDMDGSGSIEYSEFIASAIDRTILLSRE---RMERAFKMFDKDGSGKISTKELF  440 (486)
T ss_dssp             HHHCTTCCSSBCHHHHHHHHSCTTTTCCHH---HHHHHHHHHCSSCSSSBCSSCC-
T ss_pred             HHhcCCCCCcCcHHHHHHHHHhhhccchHH---HHHHHHHHhCCCCCCcCCHHHHH
Confidence            446788899999999876554444444444   45567888899999999998874

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=89.90  E-value=0.31  Score=43.78  Aligned_cols=56  Identities=23%  Similarity=0.276  Sum_probs=42.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-----CCChHHHHHHHH-HhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-----KIGEKDISQICN-QFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-----~i~~e~i~~i~~-~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+.. .+...+     .++++++..+.+ -|...|.|+||.|+.++..
T Consensus       202 F~~~D~d~~G~Is~~E~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~  263 (272)
T 2be4_A          202 FAHYDVSRTGALEGPEVDG-FVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELA  263 (272)
T ss_dssp             HHHHCTTCCSEEETHHHHH-HHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHH
T ss_pred             HHHhCCCCCCeecHHHHHH-HHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            4557889999999888543 444443     589999887443 5889999999999998864

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=89.88  E-value=0.17  Score=40.10  Aligned_cols=30  Identities=20%  Similarity=0.239  Sum_probs=27.3

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++..++.+.|+..|.|+||.|+.+||.
T Consensus         8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~   37 (111)
T 2kgr_A            8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQAR   37 (111)
T ss_dssp             SCHHHHHHHHHHHHTTSCSSCCEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            577889999999999999999999999875

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=89.86  E-value=0.23  Score=40.71  Aligned_cols=55  Identities=24%  Similarity=0.364  Sum_probs=38.6

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCC-ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKI-GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i-~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+++|.++..||+.........- .......+...|+..|.|++|.|+.+|+.
T Consensus        64 ~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~  119 (162)
T 1top_A           64 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELG  119 (162)
T ss_dssp             HHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             HHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            35677889999888876554332211 11145567788999999999999999874

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=89.85  E-value=0.3  Score=44.28  Aligned_cols=53  Identities=26%  Similarity=0.229  Sum_probs=39.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|++|.++..|+...........+++   ++...|+..|.|++|.|+.+|+.
T Consensus       136 ~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~---~l~~~F~~~D~d~dG~I~~~Ef~  188 (256)
T 2jul_A          136 NAFDADGNGAIHFEDFVVGLSILLRGTVHE---KLKWAFNLYDINKDGCITKEEML  188 (256)
T ss_dssp             HHSSCSCCSEECSHHHHHHHHHHHSCCHHH---HHHHHHHHTCCSSSSCBCHHHHH
T ss_pred             HHhccCCCCcCcHHHHHHHHHHHhccChHH---HHHHHHHHhCCCCCCcCcHHHHH
Confidence            456888999999999876544433333333   44567889999999999999875

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=89.85  E-value=0.16  Score=50.27  Aligned_cols=48  Identities=21%  Similarity=0.486  Sum_probs=19.9

Q ss_pred             hhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPD  382 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d  382 (388)
                      .|.|++|.++..|. ...|...| ++++++++++.   ++.|.|+||.|+.+|
T Consensus       384 fDkDgdG~IS~eEL-r~vL~~lGe~LSdeEIdeLf---ke~D~DgDGkIsyeE  432 (440)
T 3u0k_A          384 FDKDGNGYISAAEL-RHVMTNLGEKLTDEEVDEMI---READIDGDGQVNYEE  432 (440)
T ss_dssp             HCTTCSSEECHHHH-HHHHHHHTCCCCHHHHHHHH---HHHCTTCSSSEEHHH
T ss_pred             HCCCCcCcCCHHHH-HHHHHHhCCCCCHHHHHHHH---HHhCCCCCCcEeHHH
Confidence            34444555444442 22233322 34444444332   233445555555444

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=89.84  E-value=0.28  Score=43.73  Aligned_cols=53  Identities=26%  Similarity=0.263  Sum_probs=39.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|++|.++..|++...-.......+   ..+...|+..|.|++|.|+.+|+.
T Consensus       109 ~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~---~~l~~~F~~~D~d~dG~Is~~E~~  161 (229)
T 3dd4_A          109 NAFDTDHNGAVSFEDFIKGLSILLRGTVQ---EKLNWAFNLYDINKDGYITKEEML  161 (229)
T ss_dssp             HTTCSSCCSSCCHHHHHHHHHHHHHSCHH---HHHHHHHHHHCTTCSSCCBHHHHH
T ss_pred             HHcCCCCCCeEeHHHHHHHHHHHcCCChH---HHHHHHHHHhCCCCCCeECHHHHH
Confidence            45688899999999987654443332222   345677899999999999999875

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=89.78  E-value=0.4  Score=40.22  Aligned_cols=48  Identities=21%  Similarity=0.386  Sum_probs=21.3

Q ss_pred             hhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.+++|.++..|+. ..+...| ..+++++..+.+.+   | |++|.|+.++.
T Consensus        86 ~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~~~~~~~---d-d~dg~i~~~eF  134 (173)
T 1alv_A           86 FDVDRSGTIGSSELP-GAFEAAGFHLNEHLYSMIIRRY---S-DEGGNMDFDNF  134 (173)
T ss_dssp             HCTTCCSSBCTTTHH-HHHHHHTCCCCHHHHHHHHHHH---T-CSSSCBCHHHH
T ss_pred             HCCCCCCCCCHHHHH-HHHHHcCCCCCHHHHHHHHHHh---c-CCCCcCcHHHH
Confidence            445555555554432 2222222 23444444443333   4 55555555543

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=89.70  E-value=0.34  Score=40.33  Aligned_cols=51  Identities=12%  Similarity=0.143  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...| |.||.++..| +...|...| .+++++.++.   +..|.|+||.|+.++-.
T Consensus        57 F~~fD-d~dG~Is~~E-l~~~l~~~g-l~~~el~~I~---~~~D~d~dG~Ld~~EF~  107 (139)
T 2jq6_A           57 FYTLS-PVNGKITGAN-AKKEMVKSK-LPNTVLGKIW---KLADVDKDGLLDDEEFA  107 (139)
T ss_dssp             HHHSC-CSSSEEEHHH-HHHHHHHTT-CCHHHHHHHH---HHHCSSCCSEEEHHHHH
T ss_pred             HHHhC-CCCCeECHHH-HHHHHHHhC-cCHHHHHHHH---HHhCCCCCCcCcHHHHH
Confidence            45568 8999999877 455566655 8888877665   45799999999988753

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=89.68  E-value=0.37  Score=42.52  Aligned_cols=53  Identities=11%  Similarity=0.014  Sum_probs=38.8

Q ss_pred             hhhcCCCCc-cchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGF-ISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~-~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|. ++..||+...........  .-..+...|+..|.|++|.|+.+|+.
T Consensus        99 ~~D~d~dG~~I~f~EF~~~~~~~~~~~~--~~~~l~~~F~~~D~d~dG~Is~~El~  152 (214)
T 2l4h_A           99 VFSTSPAKDSLSFEDFLDLLSVFSDTAT--PDIKSHYAFRIFDFDDDGTLNREDLS  152 (214)
T ss_dssp             HHCCSSSCCSEEHHHHHHHHHHTSSCSC--HHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             HhCcCCCCCEecHHHHHHHHHHHcCCCC--HHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            357788999 999998765543332222  22456678999999999999999985

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=89.62  E-value=0.34  Score=42.93  Aligned_cols=53  Identities=9%  Similarity=0.067  Sum_probs=32.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+... ..++++++..+.   +..| |++|.|+.++.+
T Consensus       122 ~F~~~D~d~~G~I~~~El~-~~l~~~g~~~~~~~~~~l~---~~~d-d~dg~I~~~eF~  175 (220)
T 3sjs_A          122 LFVMNARARSGTLEPHEIL-PALQQLGFYINQRTSLLLH---RLFA-RGMAFCDLNCWI  175 (220)
T ss_dssp             HHHHHCCSSTTEECHHHHH-HHHHHHTCCCCHHHHHHHH---HHHC---CCSEEHHHHH
T ss_pred             HHHHHCCCCCCCCcHHHHH-HHHHHhCCCCCHHHHHHHH---HHhc-CCCCcCcHHHHH
Confidence            4455677788888877653 344444 356666666554   4456 778888877754

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=89.60  E-value=0.3  Score=41.47  Aligned_cols=54  Identities=26%  Similarity=0.359  Sum_probs=39.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+....-......+++++   ...|+..|.|++|.|+.+++.
T Consensus        69 f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~---~~~f~~~D~d~~G~i~~~ef~  122 (190)
T 1fpw_A           69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL---SWAFELYDLNHDGYITFDEML  122 (190)
T ss_dssp             HHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHH---HHHHHHHCSSCSSEEEHHHHH
T ss_pred             HHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHH---HHHHHHhcCCCCCcCcHHHHH
Confidence            345678889999999987554443344455544   456788899999999999874

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=89.47  E-value=0.3  Score=41.57  Aligned_cols=53  Identities=23%  Similarity=0.229  Sum_probs=38.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|+...........++   ..+...|+..|.|++|.|+.+++.
T Consensus        70 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~---~~~~~~f~~~D~d~~G~I~~~E~~  122 (193)
T 1bjf_A           70 RTFDANGDGTIDFREFIIALSVTSRGKLE---QKLKWAFSMYDLDGNGYISKAEML  122 (193)
T ss_dssp             HHHCSSCSSEEEHHHHHHHHHHHTSSCHH---HHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHHHcCCCHH---HHHHHHHhhcCCCCCCeECHHHHH
Confidence            44678899999999987544433333323   345567889999999999999874

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=89.47  E-value=0.31  Score=41.74  Aligned_cols=45  Identities=16%  Similarity=0.326  Sum_probs=32.2

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.|.+|.++-.||+...-.         +.++.+.|+..| |++|.|+.+||.
T Consensus        54 ~~D~d~~G~I~f~EF~~~~~~---------~~~l~~aF~~fD-d~~G~I~~~El~   98 (174)
T 2i7a_A           54 LMELKVNGRLDQEEFARLWKR---------LVHYQHVFQKVQ-TSPGVLLSSDLW   98 (174)
T ss_dssp             HHCSSCSSEECHHHHHHHHHH---------HHHHHHHHHHHC-SBTTBEEGGGHH
T ss_pred             HHCCCCCCcCCHHHHHHHHHH---------HHHHHHHHHHhc-CCCCcCCHHHHH
Confidence            456777888888887643211         245677888888 888988888874

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=89.37  E-value=0.26  Score=41.83  Aligned_cols=53  Identities=25%  Similarity=0.210  Sum_probs=38.0

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|+...........++   ..+...|+..|.|++|.|+.+++.
T Consensus        70 ~~~D~d~~g~i~~~ef~~~~~~~~~~~~~---~~~~~~f~~~D~d~~G~i~~~e~~  122 (190)
T 1g8i_A           70 NVFDENKDGRIEFSEFIQALSVTSRGTLD---EKLRWAFKLYDLDNDGYITRNEML  122 (190)
T ss_dssp             HHHCTTCSSEEEHHHHHHHHHHHHHCCHH---HHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             HHHhcCCCCeEeHHHHHHHHHHhcCCCHH---HHHHHHHHhhcCCCCCeECHHHHH
Confidence            44678899999999987544333323223   345567889999999999999874

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=89.34  E-value=0.22  Score=37.24  Aligned_cols=32  Identities=19%  Similarity=0.382  Sum_probs=27.8

Q ss_pred             cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          353 GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       353 g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      |..+++....+.+.|+..|.|++|.|+.+|+.
T Consensus         1 g~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~   32 (92)
T 2kn2_A            1 GHMDTDAEEELKEAFKVFDKDQNGYISASELR   32 (92)
T ss_dssp             CCCCCHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHCCCCCCeEcHHHHH
Confidence            34567788889999999999999999999874

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=89.23  E-value=0.22  Score=37.10  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=28.2

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++++++..+.+.|...|.|++|.|+.+|+.
T Consensus        13 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~   43 (90)
T 1avs_A           13 FLSEEMIAEFKAAFDMFDADGGGDISTKELG   43 (90)
T ss_dssp             HBCHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            4688899999999999999999999999874

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A

Probab=89.21  E-value=0.49  Score=35.27  Aligned_cols=53  Identities=19%  Similarity=0.279  Sum_probs=37.7

Q ss_pred             hhhhh-cCCCC-ccchhHHHHHHHHH-----h-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAAD-MNHNG-FISKSEYVIFKLKE-----M-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~-~d~~~-~~~~~e~~~~~L~~-----~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...| .+.+| .++..|+. ..+..     . ...+++++..+.   ...|.|++|.|+.++..
T Consensus        15 F~~~D~~d~~G~~I~~~el~-~~l~~~~~~~~g~~~~~~~~~~~~---~~~D~d~dg~i~~~eF~   75 (93)
T 1k2h_A           15 FHAHSGKEGDKYKLSKKELK-DLLQTELSSFLDVQKDADAVDKIM---KELDENGDGEVDFQEFV   75 (93)
T ss_dssp             HHHHHTTSSCCSSCCHHHHH-HHHHHHTHHHHHCCCCHHHHHHHH---HHHHHCTTSCCCHHHHH
T ss_pred             HHHHcccCCCcCccCHHHHH-HHHHHHHHHHhCCCCCHHHHHHHH---HHhCCCCCCcCcHHHHH
Confidence            44567 68999 99988864 34443     4 367788777655   45578999999998764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=89.18  E-value=0.3  Score=42.28  Aligned_cols=53  Identities=23%  Similarity=0.280  Sum_probs=39.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|+....-......+++++.   ..|+..|.|++|.|+.+++.
T Consensus        78 ~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~---~~f~~~D~d~~G~I~~~E~~  130 (207)
T 2d8n_A           78 RSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLE---WAFSLYDVDGNGTISKNEVL  130 (207)
T ss_dssp             HHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHH---HHHHHHCTTCSSEECHHHHH
T ss_pred             HHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHH---HHHHHhcCCCCCeEcHHHHH
Confidence            456788899999998876554444445555554   56778899999999999875

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=89.15  E-value=0.26  Score=41.87  Aligned_cols=54  Identities=20%  Similarity=0.273  Sum_probs=37.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+...........+++   .+...|+..|.|++|.|+.+++.
T Consensus        69 f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~---~~~~~f~~~D~d~~G~i~~~e~~  122 (190)
T 2l2e_A           69 FNVFDADKNGYIDFKEFICALSVTSRGELND---KLIWAFQLYDLDNNGLISYDEML  122 (190)
T ss_dssp             HHHHCSSSTTCEEHHHHHHHHTTSSCSCSHH---HHHHHHHHHCTTSCSCBCHHHHH
T ss_pred             HHHhcCCCCCeEeHHHHHHHHHHHcCCCHHH---HHHHHHhHccCCCCCcCcHHHHH
Confidence            3456788999999998765433222333334   44566888899999999999875

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=89.15  E-value=0.27  Score=37.92  Aligned_cols=53  Identities=21%  Similarity=0.329  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|. ...+...    ..++++++..+   |+..|.|++|.|+.++..
T Consensus        48 F~~~D~d~~G~i~~~el-~~~l~~~~~~~~~~~~~~~~~~---~~~~D~~~dg~i~~~EF~  104 (109)
T 3fs7_A           48 FGILDQDKSGFIEEEEL-QLFLKNFSSSARVLTSAETKAF---LAAGDTDGDGKIGVEEFQ  104 (109)
T ss_dssp             HHHHSTTCSSSBCHHHH-HTTGGGTCTTSCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHCCCCCCeEeHHHH-HHHHHHHhcccccCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            45568899999998874 3444444    35677777655   556689999999998864

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=89.11  E-value=0.48  Score=39.22  Aligned_cols=59  Identities=20%  Similarity=0.190  Sum_probs=38.6

Q ss_pred             chhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          324 TIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       324 t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +..++..+..+.+|.++..||+...........  ....+...|+..|.|++|.|+.+|+.
T Consensus        60 ~~~~~~~l~~~~dg~i~~~eF~~~~~~~~~~~~--~~~~l~~~F~~~D~d~~G~I~~~el~  118 (166)
T 2mys_B           60 KNEELDAMIKEASGPINFTVFLTMFGEKLKGAD--PEDVIMGAFKVLDPDGKGSIKKSFLE  118 (166)
T ss_pred             CHHHHHHHHHHCCCCcCHHHHHHHHHHHhccCC--cHHHHHHHHHHhCCCCCcceeHHHHH
Confidence            333333333334788888888765554433322  22455678999999999999999874

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=89.05  E-value=0.37  Score=40.40  Aligned_cols=55  Identities=22%  Similarity=0.361  Sum_probs=39.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..||+.........  ......+.+.|+..|.|++|.|+.+|+.
T Consensus        53 ~~~~D~~~~g~i~~~EF~~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~I~~~E~~  107 (179)
T 2f2o_A           53 INEVDADGNGTIDFPEFLTMMARKMKD--TDSEEEIREAFRVFDKDGNGYISAAELR  107 (179)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHhccCCCCCCcHHHHHHHHHHHccC--cccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            345677888999998887655443322  2334556778899999999999998874

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=89.05  E-value=0.4  Score=42.40  Aligned_cols=54  Identities=19%  Similarity=0.089  Sum_probs=38.5

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..||+..........  ..-..+...|+..|.|++|.|+.+|+.
T Consensus        92 ~~~D~d~dG~I~~~Ef~~~~~~~~~~~--~~~~~l~~~F~~~D~d~~G~Is~~E~~  145 (226)
T 2zfd_A           92 DLFDTKHNGILGFEEFARALSVFHPNA--PIDDKIHFSFQLYDLKQQGFIERQEVK  145 (226)
T ss_dssp             HHHCSSCSSSBCHHHHHHHHHHTSTTS--CHHHHHHHHHHHHCTTSSSSEEHHHHH
T ss_pred             HHHcCCCCCcCcHHHHHHHHHHHccCC--CHHHHHHHHHHHhCCCCCCcccHHHHH
Confidence            446788899999999865443332222  233456678999999999999999874

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=89.02  E-value=0.4  Score=40.99  Aligned_cols=53  Identities=21%  Similarity=0.301  Sum_probs=37.4

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++.+.+|.++-.||+......  ......-..+.+.|+..|.|++|.|+.+||.
T Consensus        55 ~~d~d~~~~i~~~ef~~~~~~~--~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~  107 (176)
T 2lhi_A           55 EIDVDGNHQIEFSEFLALMSRQ--LKSNDSEQELLEAFKVFDKNGDGLISAAELK  107 (176)
T ss_dssp             TTCSSCSSSBCTTHHHHHHTSS--CCSSHHHHHHHHHHHHHCSSCSSSBCHHHHH
T ss_pred             HhCcCCCccchHHHHHHHHHHh--cccCCcHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3567778888888876433222  1222334567788999999999999999974

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=89.01  E-value=0.19  Score=41.30  Aligned_cols=55  Identities=20%  Similarity=0.187  Sum_probs=39.1

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCC--hHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIG--EKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~--~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|.++..||+...........  +.....+...|+..|.|++|.|+.+++.
T Consensus        58 ~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~  114 (158)
T 2jnf_A           58 EFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMR  114 (158)
T ss_dssp             HHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHH
T ss_pred             HhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            457788999999998776555443320  0223345678899999999999999874

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=88.97  E-value=0.14  Score=40.79  Aligned_cols=30  Identities=27%  Similarity=0.267  Sum_probs=22.2

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++..++.+.|+.+|.|++|+|+.+|+.
T Consensus        16 ls~~~~~~~~~~F~~~D~d~dG~Is~~el~   45 (110)
T 1iq3_A           16 ITEEQREYYVNQFRSLQPDPSSFISGSVAK   45 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCSSSSEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCeEcHHHHH
Confidence            456667777777888888888888777764

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=88.90  E-value=0.39  Score=40.55  Aligned_cols=50  Identities=28%  Similarity=0.535  Sum_probs=37.2

Q ss_pred             hhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.|++|.++..|+.. .+...| .++++++..+   |+..|.|++|.|+.++..
T Consensus       111 fD~d~~G~I~~~E~~~-~l~~~g~~~~~~~~~~~---~~~~D~d~dG~i~~~ef~  161 (186)
T 2hps_A          111 IDTDKDGYVSLPEFKA-FLQAVGPDLTDDKAITC---FNTLDFNKNGQISRDEFL  161 (186)
T ss_dssp             HCTTCSSEEEHHHHHH-HHHHHCTTCCHHHHHHH---HHHHCTTCSSEEEHHHHH
T ss_pred             ccCCCCCcCCHHHHHH-HHHHhCCCCCHHHHHHH---HHHHcCCCCCcCcHHHHH
Confidence            3888999999888654 444444 4777776654   666699999999998864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=88.77  E-value=0.21  Score=50.04  Aligned_cols=53  Identities=28%  Similarity=0.547  Sum_probs=35.4

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|.+|.++..||+..........++++   +.+.|+..|.|+||.|+.+|+.
T Consensus       397 ~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~Is~~El~  449 (494)
T 3lij_A          397 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDK---LESAFQKFDQDGNGKISVDELA  449 (494)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHSCHHHHTCHHH---HHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHhhhccccHHH---HHHHHHHHCCCCCCcCCHHHHH
Confidence            3457778888888888765444333334443   4466777788888888888764

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=88.76  E-value=0.31  Score=37.50  Aligned_cols=54  Identities=17%  Similarity=0.349  Sum_probs=39.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh---c-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM---G-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~---g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+ ...+...   | ..+++++..+   |...|.|++|.|+.++..
T Consensus        46 ~F~~~D~d~~G~I~~~el-~~~l~~~~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  103 (108)
T 2pvb_A           46 AFYVIDQDKSGFIEEDEL-KLFLQNFSPSARALTDAETKAF---LADGDKDGDGMIGVDEFA  103 (108)
T ss_dssp             HHHHHCTTCSSSBCHHHH-HTGGGGTCTTSCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHCCCCCCcCCHHHH-HHHHHHHhccCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            345568899999998885 3445554   2 4778777755   555689999999998864

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=88.63  E-value=0.38  Score=40.24  Aligned_cols=44  Identities=18%  Similarity=0.255  Sum_probs=33.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChh
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP  381 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~  381 (388)
                      ...|.+++|.++..||+......         ..+.+.|+..|.|++|.|+.+
T Consensus       117 ~~~d~~~dg~i~~~eF~~~~~~~---------~~~~~~F~~~D~d~dG~i~~~  160 (172)
T 2znd_A          117 RKFDRQGRGQIAFDDFIQGCIVL---------QRLTDIFRRYDTDQDGWIQVS  160 (172)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHHHH---------HHHHHHHHHHCTTSSSCCCCC
T ss_pred             HHhCCCCCCcCcHHHHHHHHHHH---------HHHHHHHHHhCCCCCCeEeee
Confidence            34577888999988887654432         566788999999999999864

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=88.54  E-value=0.18  Score=36.74  Aligned_cols=53  Identities=21%  Similarity=0.529  Sum_probs=38.1

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc--CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG--KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g--~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...|  ..+++++..+   |...|.|++|.|+.++..
T Consensus        14 F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~   68 (81)
T 1c7v_A           14 FKVFDANGDGVIDFDEFK-FIMQKVGEEPLTDAEVEEA---MKEADEDGNGVIDIPEFM   68 (81)
T ss_dssp             HHHHSCSGGGEECHHHHH-HHSSTTTTCCCCHHHHHHH---HHHHCSSGGGSEEHHHHH
T ss_pred             HHHHCCCCCCcCCHHHHH-HHHHHhCCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            445688899999988753 4455554  4567766654   566789999999998764

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=88.48  E-value=0.46  Score=39.71  Aligned_cols=53  Identities=21%  Similarity=0.439  Sum_probs=29.1

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| ..+++++..+   |+..|.|++|.|+.++..
T Consensus        80 F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~~~---~~~~d~~~dg~i~~~eF~  133 (172)
T 2znd_A           80 FRTYDRDNSGMIDKNELK-QALSGFGYRLSDQFHDIL---IRKFDRQGRGQIAFDDFI  133 (172)
T ss_dssp             HHHHCTTCSSEECHHHHH-HHHHHTTCCCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HHHHCCCCCCccCHHHHH-HHHHHcCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            344566667776666643 3333333 3455554433   445566777777766643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=88.37  E-value=0.21  Score=49.62  Aligned_cols=50  Identities=28%  Similarity=0.556  Sum_probs=24.2

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.|.+|.++..||+..........++   +.+.+.|+..|.|+||.|+.+|+
T Consensus       391 ~D~d~~g~i~~~Ef~~~~~~~~~~~~~---~~~~~~F~~~D~d~dG~I~~~El  440 (484)
T 3nyv_A          391 VDFDKNGYIEYSEFVTVAMDRKTLLSR---ERLERAFRMFDSDNSGKISSTEL  440 (484)
T ss_dssp             HTCCTTSEEEHHHHHHHHHHHHHHHHH---HHHHHHHHHHCTTCCSEEEHHHH
T ss_pred             hCCCCCCeEeHHHHHHHHHhccccCcH---HHHHHHHHHHCCCCCCcCCHHHH
Confidence            455556666666655443332221112   23334455556666666665554

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=88.36  E-value=0.89  Score=37.72  Aligned_cols=55  Identities=16%  Similarity=0.221  Sum_probs=41.0

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhc------CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMG------KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +.+...|.|++|.++..|+ ...+...|      ..+++++..+   |+..|.|++|.|+.++..
T Consensus         5 ~~F~~~D~d~~G~i~~~el-~~~l~~lg~~~~~~~~~~~~~~~l---~~~~D~~~~g~i~~~eF~   65 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADEL-QRCLTQSGIAGGYKPFNLETCRLM---VSMLDRDMSGTMGFNEFK   65 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHH-HHHHHHHTCSTTSCCCCHHHHHHH---HHHHCTTCCSCBCHHHHH
T ss_pred             HHHHHHHcCCCCcCCHHHH-HHHHHhhcccCCCCCcCHHHHHHH---HHHHCCCCCCcCCHHHHH
Confidence            3456788999999998885 45666666      3567766655   556689999999998864

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=88.35  E-value=0.52  Score=37.84  Aligned_cols=53  Identities=13%  Similarity=0.213  Sum_probs=39.6

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+. |.++..||+.................+...|+..|.|++|.|+.+++.
T Consensus        56 ~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~  108 (149)
T 2mys_C           56 EEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELR  108 (149)
T ss_pred             ccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHH
Confidence            35667 889999887766655333344455667788999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=88.33  E-value=0.23  Score=49.78  Aligned_cols=52  Identities=29%  Similarity=0.509  Sum_probs=28.5

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.|.||.++..||+..........+++   .+.+.|+..|.|+||.|+.+|+.
T Consensus       407 ~~D~d~dG~I~~~EF~~~~~~~~~~~~~~---~~~~~F~~~D~d~dG~Is~~El~  458 (504)
T 3q5i_A          407 EVDFDKNGYIEYSEFISVCMDKQILFSEE---RLRRAFNLFDTDKSGKITKEELA  458 (504)
T ss_dssp             HHCTTCSSSEEHHHHHHHHSCHHHHTCHH---HHHHHHHHHCTTCCSEECHHHHH
T ss_pred             HhCCCCCCcEeHHHHHHHHHhhhcccCHH---HHHHHHHHhcCCCCCcCcHHHHH
Confidence            34666677777777655433222222232   33455666666777777666653

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=88.32  E-value=0.38  Score=39.31  Aligned_cols=55  Identities=24%  Similarity=0.459  Sum_probs=40.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| .++++++..+.+.+. .|.|++|.|+.++..
T Consensus        90 F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~~~~~~-~D~d~dg~i~~~eF~  145 (156)
T 1wdc_C           90 FKTFDREGQGFISGAELR-HVLTALGERLSDEDVDEIIKLTD-LQEDLEGNVKYEDFV  145 (156)
T ss_dssp             HHTTCSSSSSEEEHHHHH-HHHHHSSSCCCHHHHHHHHHHHT-CCCCTTSEEEHHHHH
T ss_pred             HHHhCCCCCCcCcHHHHH-HHHHHcCCCCCHHHHHHHHHHhC-CCCCCCCcEeHHHHH
Confidence            455788999999988754 4555555 578888776655421 699999999998864

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=88.30  E-value=0.62  Score=39.52  Aligned_cols=57  Identities=26%  Similarity=0.457  Sum_probs=39.7

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH---hc---CCChHH---HHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE---MG---KIGEKD---ISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~---~g---~i~~e~---i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-..   .|   ++++++   -..+.+-|+..|.|++|.|+.+++.
T Consensus       105 f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  170 (193)
T 1bjf_A          105 FSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI  170 (193)
T ss_dssp             HHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred             HhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            345688999999998875433221   23   344432   3446677899999999999999875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=88.29  E-value=0.36  Score=39.17  Aligned_cols=50  Identities=12%  Similarity=0.156  Sum_probs=33.7

Q ss_pred             CCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          335 HNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       335 ~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+|.++..||+...........+.....+.+.|+..|.|++|.|+.+++.
T Consensus        61 ~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~  110 (151)
T 1w7j_B           61 KSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELR  110 (151)
T ss_dssp             TTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHH
T ss_pred             CCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            56788888887766555544444555667788999999999999999874

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=88.19  E-value=0.32  Score=41.32  Aligned_cols=52  Identities=25%  Similarity=0.401  Sum_probs=35.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+..... .....+   ..+...|+..|.|++|.|+.+|+.
T Consensus        80 ~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~---~~~~~~F~~~D~d~~G~I~~~El~  131 (180)
T 3mse_B           80 QALDINDRGNITYTEFMAGCYR-WKNIES---TFLKAAFNKIDKDEDGYISKSDIV  131 (180)
T ss_dssp             HHHCTTCCSEECHHHHHHHHSC-CTTC-----CHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHh-cccCCH---HHHHHHHHHHCCCCCCCCCHHHHH
Confidence            3457788888888887643322 122222   456677888999999999998874

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=88.07  E-value=0.28  Score=40.58  Aligned_cols=17  Identities=24%  Similarity=0.546  Sum_probs=8.6

Q ss_pred             hhhcCCCCCCccChhhh
Q 016527          367 FNRLDPNNCGKITLPDL  383 (388)
Q Consensus       367 F~~ld~~~~g~l~~~d~  383 (388)
                      |+..|.|++|.|+.+|.
T Consensus       139 ~~~~d~~~dg~i~~~eF  155 (166)
T 2aao_A          139 MRDVDQDNDGRIDYNEF  155 (166)
T ss_dssp             HHHHCTTCSSSBCHHHH
T ss_pred             HHHhCCCCCCcEeHHHH
Confidence            34445555555555543

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=88.05  E-value=0.87  Score=34.38  Aligned_cols=51  Identities=16%  Similarity=0.285  Sum_probs=34.1

Q ss_pred             hhhhcCCCC---ccchhHHHHHHHHH-----hc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNG---FISKSEYVIFKLKE-----MG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~---~~~~~e~~~~~L~~-----~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...| +.||   .++..|. ...+..     .| ..+++++.++   |++.|.|+||.|+.++-+
T Consensus        16 ~~~D-~~dG~~g~Is~~EL-~~~l~~~~~~~lg~~~~~~~v~~~---~~~~D~d~dG~I~f~EF~   75 (92)
T 3rm1_A           16 HQYS-GREGDKHKLKKSEL-KELINNELSHFLEEIKEQEVVDKV---METLDSNGDGECDFQEFM   75 (92)
T ss_dssp             HHHH-TSSSSTTSBCHHHH-HHHHHHHCTTTSCCCCSHHHHHHH---HHHHCTTSSSSBCHHHHH
T ss_pred             HHHc-cCCCCcCeECHHHH-HHHHHHHhhhhccCcccHHHHHHH---HHHHcCCCCCCCcHHHHH
Confidence            3445 5555   8998874 455555     43 4566666655   555699999999988743

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=87.88  E-value=0.14  Score=44.62  Aligned_cols=53  Identities=23%  Similarity=0.266  Sum_probs=30.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc---CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG---KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g---~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...+   .++++   ++.+-|++.|.|+||.|+.+|..
T Consensus       135 F~~~D~d~~G~Is~~El~-~~l~~~~~~~~~~~~---~~~~l~~~~D~d~dG~Is~~EF~  190 (197)
T 3pm8_A          135 FKFFDIDGNGKISVEELK-RIFGRDDIENPLIDK---AIDSLLQEVDLNGDGEIDFHEFM  190 (197)
T ss_dssp             HHHHCTTCSSEECHHHHH-HHHC----CCHHHHH---HHHHHHHHHCTTCSSSEEHHHHH
T ss_pred             HHHHCCCCCCCCCHHHHH-HHHHhcccCCCCCHH---HHHHHHHHHcCCCCCcCcHHHHH
Confidence            345667777777776643 3333331   22333   34455778888888888777654

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=87.86  E-value=0.16  Score=38.30  Aligned_cols=33  Identities=12%  Similarity=0.276  Sum_probs=28.2

Q ss_pred             hcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          352 MGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       352 ~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ....++++...+.+.|+..|.|++|.|+.+|+.
T Consensus        18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~   50 (91)
T 2pmy_A           18 GADGDGEELARLRSVFAACDANRSGRLEREEFR   50 (91)
T ss_dssp             -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHH
T ss_pred             hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence            344568889999999999999999999999874

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=87.76  E-value=0.63  Score=39.88  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=32.7

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccC
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKIT  379 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~  379 (388)
                      ..+|.|+||.++..||+.....         ...+.+.|+..|.|++|.|+
T Consensus       136 ~~~D~d~dg~i~~~eF~~~~~~---------~~~~~~~F~~~D~d~dG~i~  177 (191)
T 1y1x_A          136 RKFDRQRRGSLGFDDYVELSIF---------VCRVRNVFAFYDRERTGQVT  177 (191)
T ss_dssp             HHHCTTCSSSBCHHHHHHHHHH---------HHHHHHHHHHHCTTCCSEEE
T ss_pred             HHhCCCCCCeEeHHHHHHHHHH---------HHHHHHHHHHhCcCCCceEE
Confidence            4467788999999998765543         25667889999999999954

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=87.72  E-value=0.39  Score=36.99  Aligned_cols=53  Identities=25%  Similarity=0.444  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...    ...+++++..+   |+..|.|++|.|+.++..
T Consensus        48 F~~~D~d~~G~I~~~el-~~~l~~~~~~g~~~~~~~~~~~---~~~~d~~~dg~i~~~eF~  104 (110)
T 1pva_A           48 FKAIDADASGFIEEEEL-KFVLKSFAADGRDLTDAETKAF---LKAADKDGDGKIGIDEFE  104 (110)
T ss_dssp             HHHHCTTCSSSBCHHHH-HTGGGGTCTTCCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHhCCCCCCcCcHHHH-HHHHHHHhhcCCCCCHHHHHHH---HHHhCCCCCCeEcHHHHH
Confidence            45568899999998874 3455554    24777777655   455689999999998864

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=87.70  E-value=0.51  Score=42.14  Aligned_cols=55  Identities=24%  Similarity=0.341  Sum_probs=41.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-----CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-----KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-----~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...+     .++++++..+.+.+  .|.|+||.|+.++..
T Consensus       196 ~F~~~D~d~~G~is~~El~-~~l~~~~~~~~~~~~~~e~~~~~~~~--~D~d~dG~i~~~EF~  255 (263)
T 2f33_A          196 AFELYDQDGNGYIDENELD-ALLKDLCEKNKQELDINNISTYKKNI--MALSDGGKLYRTDLA  255 (263)
T ss_dssp             HHHHHCCSSSSCEEHHHHH-HHHHHHHHHCTTTCCTTTHHHHHHHH--HTTSBTTEECGGGTH
T ss_pred             HHHHhCCCCCCcccHHHHH-HHHHHHHHhcCCCCCHHHHHHHHHHh--hccCCCCeEcHHHHH
Confidence            3456788999999988864 3444444     68999998876652  399999999998864

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=87.68  E-value=0.56  Score=37.51  Aligned_cols=55  Identities=24%  Similarity=0.317  Sum_probs=41.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..||+...........  ....+...|+..|.|++|.|+.+++.
T Consensus        48 ~~~~d~~~~g~i~~~eF~~~~~~~~~~~~--~~~~~~~~F~~~D~d~~G~i~~~el~  102 (142)
T 2bl0_C           48 FNEADATGNGKIQFPEFLSMMGRRMKQTT--SEDILRQAFRTFDPEGTGYIPKAALQ  102 (142)
T ss_dssp             HHHHCTTCSSEEEHHHHHHHHHHHHTTCC--CHHHHHHHHHHTCCSSCSCEEHHHHH
T ss_pred             HHHhCcCCCCeeeHHHHHHHHHHHhcCCC--hHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            34567889999999999876665443322  33456688999999999999999874

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=87.59  E-value=0.17  Score=40.28  Aligned_cols=53  Identities=21%  Similarity=0.241  Sum_probs=38.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.|++|.++..|. ...+...| .+++++.++.   ++.|.|++|.|+.++.+
T Consensus        27 ~F~~~D~d~dG~Is~~el-~~~l~~~g-l~~~el~~i~---~~~D~d~dG~I~~~EF~   79 (110)
T 1iq3_A           27 QFRSLQPDPSSFISGSVA-KNFFTKSK-LSIPELSYIW---ELSDADCDGALTLPEFC   79 (110)
T ss_dssp             HHHHHCCSSSSEEEHHHH-HHHCCSSS-CSSCCHHHHH---HHHCSSSCSEEEHHHHH
T ss_pred             HHHHHCCCCCCeEcHHHH-HHHHHHcC-CCHHHHHHHH---HHHcCCCCCcCcHHHHH
Confidence            345678899999998773 44455554 6777777664   56799999999998753

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=87.58  E-value=0.4  Score=41.47  Aligned_cols=52  Identities=17%  Similarity=0.259  Sum_probs=31.2

Q ss_pred             hhhhcC--CCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMN--HNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d--~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+  ++|.++..| +...|..  ..+..+ ..+.+-|+..|.|++|.|+.++..
T Consensus        44 ~~~D~d~~~~G~i~~~e-~~~~l~~--~~~~~~-~~~~~~f~~~D~d~~g~i~~~Ef~   97 (207)
T 2ehb_A           44 KKLSSSIIDDGLIHKEE-FQLALFR--NRNRRN-LFADRIFDVFDVKRNGVIEFGEFV   97 (207)
T ss_dssp             HHHTTSSSCSSCEEHHH-HHHHHHS--CTTCCC-HHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhccccCCCCccCHHH-HHHHHhc--cccccH-HHHHHHHHHhcCCCCCeEeHHHHH
Confidence            445667  778887666 3444443  222221 123455777788888888887764

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=87.42  E-value=0.79  Score=39.91  Aligned_cols=54  Identities=26%  Similarity=0.402  Sum_probs=38.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc------CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG------KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+.. .+...+      ..+.++  .+..-|+..|.|++|.|+.+++.
T Consensus        99 F~~~D~d~~G~I~~~E~~~-~l~~~~~~~~~~~~~~~~--~~~~~f~~~D~d~dG~I~~~Ef~  158 (211)
T 2ggz_A           99 FKLYDADGNGSIDKNELLD-MFMAVQALNGQQTLSPEE--FINLVFHKIDINNDGELTLEEFI  158 (211)
T ss_dssp             HHHHCTTCSSSBCHHHHHH-HHHHHTTSSCCCSCTHHH--HHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHhcCCCCCcCcHHHHHH-HHHHHHhhcCCccccHHH--HHHHHHHHhCCCCCCCCcHHHHH
Confidence            4557889999999888653 444443      334333  23456788899999999999875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=87.26  E-value=0.47  Score=38.35  Aligned_cols=52  Identities=19%  Similarity=0.259  Sum_probs=40.3

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| .++++++..+.+.+     |++|.|+.++..
T Consensus        89 ~F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~~~~~-----d~dg~i~~~eF~  141 (146)
T 2qac_A           89 MFAHFDNNCTGYLTKSQMK-NILTTWGDALTDQEAIDALNAF-----SSEDNIDYKLFC  141 (146)
T ss_dssp             HHHTTCTTCSSEEEHHHHH-HHHHHSSSCCCHHHHHHHHHHH-----CSSSEEEHHHHH
T ss_pred             HHHHhCCCCCCCCCHHHHH-HHHHHhCCCCCHHHHHHHHHHc-----CCCCcCcHHHHH
Confidence            3455688899999988754 4555555 58899999988888     899999998764

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=87.24  E-value=1.2  Score=38.09  Aligned_cols=55  Identities=16%  Similarity=0.323  Sum_probs=39.8

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +-+...|.|++|.++..|+. ..+...| ..+++++..+   |+..|.|++|.|+.++.+
T Consensus        41 ~~F~~~D~d~~G~i~~~e~~-~~l~~~~~~~~~~~~~~~---~~~~D~d~dg~i~~~ef~   96 (204)
T 3e3r_A           41 RFFRQLDRDGSRSLDADEFR-QGLAKLGLVLDQAEAEGV---CRKWDRNGSGTLDLEEFL   96 (204)
T ss_dssp             HHHHHHCTTCCSSBCHHHHH-HHHHTTTCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHHccCCCCCcCHHHHH-HHHHHcCCCCCHHHHHHH---HHHhccCCCCcCcHHHHH
Confidence            34566789999999988864 4444444 4566666554   556699999999998865

>3pjz_A Potassium uptake protein TRKH; structural genomics, PSI-2, protein structure initiative, NE consortium on membrane protein structure; 3.51A {Vibrio parahaemolyticus}

Probab=87.01  E-value=0.25  Score=49.89  Aligned_cols=20  Identities=20%  Similarity=0.295  Sum_probs=18.0

Q ss_pred             CCcchhhhheeeeeeccccc
Q 016527          133 HPVVDALYFCIVTMCTIGYG  152 (388)
Q Consensus       133 ~s~~~a~yf~~vtltTVGYG  152 (388)
                      .+++||+..++.+++|=||.
T Consensus       205 m~~fdAi~Ha~Sa~~tgGFs  224 (494)
T 3pjz_A          205 MTPFDAISHSFSTIAIGGFS  224 (494)
T ss_dssp             CCSHHHHTTTHHHHTTCCCC
T ss_pred             CcHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999986

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=86.79  E-value=0.43  Score=40.29  Aligned_cols=56  Identities=21%  Similarity=0.026  Sum_probs=37.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhc-------CCChHHHH-HHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMG-------KIGEKDIS-QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g-------~i~~e~i~-~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+........       ....+.+. -+...|+..|.|++|.|+.+++.
T Consensus        69 ~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~  132 (191)
T 1uhk_A           69 GGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWK  132 (191)
T ss_dssp             HHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence            3467888999999998764433221       11111121 12377999999999999999874

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=86.74  E-value=0.35  Score=47.82  Aligned_cols=32  Identities=25%  Similarity=0.413  Sum_probs=27.3

Q ss_pred             cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          353 GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       353 g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++++|++.++.+.|+..|.|+||.|+.+||.
T Consensus       294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk  325 (440)
T 3u0k_A          294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELG  325 (440)
T ss_dssp             BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHH
Confidence            56788899999999999999999999988874

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=86.70  E-value=0.59  Score=40.01  Aligned_cols=53  Identities=23%  Similarity=0.273  Sum_probs=37.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHH-HhcCC--------ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLK-EMGKI--------GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~-~~g~i--------~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|.. ..+. ..|.-        +++++.   +-|++.|.|+||.|+.++..
T Consensus       104 F~~~D~d~dG~Is~~El~-~~l~~~~g~~~~~~~~~~~~~~~~---~~~~~~D~d~dG~I~~~EF~  165 (179)
T 3a8r_A          104 FDMVDKNADGRLTAEEVK-EIIALSASANKLSKIKERADEYTA---LIMEELDPTNLGYIEMEDLE  165 (179)
T ss_dssp             HHHHCTTCSSCBCHHHHH-HHHHHHHHTTHHHHHHHHHHHHHH---HHHHHHSTTCCSEECHHHHH
T ss_pred             HHHHCCCCCCcCCHHHHH-HHHHHHhccccccccccchHHHHH---HHHHHhCCCCCCcCcHHHHH
Confidence            456789999999988754 4444 45532        444444   55777899999999998864

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=86.68  E-value=0.63  Score=37.53  Aligned_cols=25  Identities=20%  Similarity=0.412  Sum_probs=20.9

Q ss_pred             HHHHHHHhhhcCCCCCCccChhhhc
Q 016527          360 ISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       360 i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...+.+.|+..|.|++|.|+.+++.
T Consensus        83 ~~~l~~~F~~~D~d~~G~I~~~el~  107 (146)
T 2qac_A           83 VEELIKMFAHFDNNCTGYLTKSQMK  107 (146)
T ss_dssp             HHHHHHHHHTTCTTCSSEEEHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            3456678999999999999999874

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=86.67  E-value=0.71  Score=38.08  Aligned_cols=53  Identities=17%  Similarity=0.297  Sum_probs=38.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...| ..+++++..+   |...|.|++|.|+.++..
T Consensus        54 F~~~D~d~dG~I~~~El~-~~l~~~g~~~~~~~~~~l---~~~~D~d~dg~I~~~eF~  107 (147)
T 1wy9_A           54 YMEFDLNGNGDIDIMSLK-RMLEKLGVPKTHLELKRL---IREVSSGSEETFSYSDFL  107 (147)
T ss_dssp             HTTSCCCTTSSEEHHHHH-HHHHHTTCCCCHHHHHHH---HHHHCSSCTTEECHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHH-HHHHHhCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            345688899999988854 4556665 5677777655   455688999999998764

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7

Probab=86.48  E-value=0.62  Score=35.85  Aligned_cols=56  Identities=18%  Similarity=0.281  Sum_probs=37.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH-----hcCC-ChH-------HH-HHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE-----MGKI-GEK-------DI-SQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~-----~g~i-~~e-------~i-~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+..     .|.- ++.       .. ..+.+-|.+.|.|+||.|+.++.+
T Consensus        26 F~~~D~d~dG~I~~~El~-~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~   95 (103)
T 1snl_A           26 FILHDINSDGVLDEQELE-ALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFL   95 (103)
T ss_dssp             HHHHCSSCCSEEEHHHHH-HHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHH
T ss_pred             HHHHcCCCCCcccHHHHH-HHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHH
Confidence            456789999999988854 34443     2332 221       11 235566899999999999998864

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=86.41  E-value=0.7  Score=39.17  Aligned_cols=56  Identities=16%  Similarity=0.054  Sum_probs=33.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhc-------CCChHHHH-HHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMG-------KIGEKDIS-QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g-------~i~~e~i~-~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..||+...-....       .-..+.+. .+...|+..|.|++|.|+.+++.
T Consensus        73 ~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~  136 (195)
T 1qv0_A           73 RGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWK  136 (195)
T ss_dssp             HHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHH
T ss_pred             HHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence            3467888999999998764332221       11111121 12377999999999999999874

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=86.38  E-value=0.49  Score=37.06  Aligned_cols=53  Identities=19%  Similarity=0.244  Sum_probs=37.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+.. .+...+. .++++   +..-|+..|.|++|.|+.++..
T Consensus         6 F~~~D~~~~g~i~~~e~~~-~l~~~~~~~~~~~---~~~~~~~~D~~~~g~i~~~ef~   59 (134)
T 1jfj_A            6 FKEIDVNGDGAVSYEEVKA-FVSKKRAIKNEQL---LQLIFKSIDADGNGEIDQNEFA   59 (134)
T ss_dssp             HHHHCTTCSSEEEHHHHHH-HHHTTCCSSHHHH---HHHHHHHHCSSCCSEEEHHHHH
T ss_pred             HHHHCCCCCCcCCHHHHHH-HHHHcCCCCCHHH---HHHHHHHHcCCCCCeEcHHHHH
Confidence            3456888999999888653 4455543 33334   4456778899999999998865

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=86.25  E-value=0.83  Score=37.83  Aligned_cols=50  Identities=10%  Similarity=0.003  Sum_probs=37.0

Q ss_pred             CCCccchhHHHHHHHHHhcCCC--hHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          335 HNGFISKSEYVIFKLKEMGKIG--EKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       335 ~~~~~~~~e~~~~~L~~~g~i~--~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++|.++..||+.........-.  ......+...|+..|.|++|.|+.+++.
T Consensus        66 ~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~  117 (174)
T 1q80_A           66 GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYG  117 (174)
T ss_dssp             TTSCEEHHHHHHHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHH
T ss_pred             CCCeEcHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHH
Confidence            8899999998775554443111  2234567788999999999999999874

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=86.06  E-value=0.67  Score=41.19  Aligned_cols=53  Identities=23%  Similarity=0.488  Sum_probs=36.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh-------------cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM-------------GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~-------------g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+.. .+...             ...+++++.   +-|++.|.|+||.|+.+|..
T Consensus       144 F~~~D~d~dG~Is~~E~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~f~~~D~d~dG~Is~~EF~  209 (229)
T 3dd4_A          144 FNLYDINKDGYITKEEMLD-IMKAIYDMMGKCTYPVLKEDAPRQHVE---TFFQKMDKNKDGVVTIDEFI  209 (229)
T ss_dssp             HHHHCTTCSSCCBHHHHHH-HHHHHHHHCC-----------CCTHHH---HHHHHHCSSCSSBCCHHHHH
T ss_pred             HHHhCCCCCCeECHHHHHH-HHHHHHHHhccccCCCcchhhHHHHHH---HHHHHhcCCCCCcEeHHHHH
Confidence            4567899999999888543 33332             234445554   45777799999999999865

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=86.00  E-value=0.58  Score=39.55  Aligned_cols=53  Identities=26%  Similarity=0.464  Sum_probs=40.1

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+..........++++   +...|+..|.|++|.|+.+|+.
T Consensus        94 ~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~---~~~~F~~~D~d~~G~I~~~E~~  146 (191)
T 3khe_A           94 QSVDFDRNGYIEYSEFVTVCMDKQLLLSRER---LLAAFQQFDSDGSGKITNEELG  146 (191)
T ss_dssp             HHTCTTCSSSEEHHHHHHHHSCHHHHCCHHH---HHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhCCCCCCcCCHHHHHHHHHHhcccchHHH---HHHHHHHHCCCCcCcCCHHHHH
Confidence            4467889999999999876544444444444   5577888899999999999875

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=85.94  E-value=0.68  Score=39.14  Aligned_cols=57  Identities=26%  Similarity=0.411  Sum_probs=37.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH---hcCC------ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE---MGKI------GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~---~g~i------~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-..   .|..      ....-.++.+-|+..|.|++|.|+.+++.
T Consensus       105 f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  170 (190)
T 1fpw_A          105 FELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR  170 (190)
T ss_dssp             HHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHH
T ss_pred             HHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            345688999999998876433322   2321      01222334566888899999999999875

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=85.81  E-value=0.53  Score=42.23  Aligned_cols=56  Identities=23%  Similarity=0.387  Sum_probs=44.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHH----Hhc---CCChHHHHHHHHHh-hhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLK----EMG---KIGEKDISQICNQF-NRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~----~~g---~i~~e~i~~i~~~F-~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..|.    ..|   ..+++++..+.+++ ...|.|++|.|+.++..
T Consensus        17 F~~~D~d~~G~i~~~El~-~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~   80 (272)
T 2be4_A           17 WQHFDADDNGYIEGKELD-DFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELA   80 (272)
T ss_dssp             HHHHCTTCCSEEEGGGHH-HHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHH
T ss_pred             HHHhcCCCCCCcCHHHHH-HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence            345688999999988854 3444    555   67899999888764 99999999999998864

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=85.71  E-value=1.2  Score=35.42  Aligned_cols=52  Identities=17%  Similarity=0.408  Sum_probs=38.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...| .++++++..+.+   ..|. ++|.|+.++..
T Consensus        82 F~~~D~d~~G~i~~~el~-~~l~~~g~~~~~~~~~~~~~---~~d~-~dg~i~~~eF~  134 (140)
T 1ggw_A           82 FQVFDKDATGMIGVGELR-YVLTSLGEKLSNEEMDELLK---GVPV-KDGMVNYHDFV  134 (140)
T ss_dssp             HHTTCSSCSSCCCHHHHH-HHHHHHHSCSCHHHHHHHHH---HTTC-SSCCSTTTHHH
T ss_pred             HHHhCCCCCCcEeHHHHH-HHHHHcCCCCCHHHHHHHHH---hccC-CCCcEeHHHHH
Confidence            455788999999988864 3444444 578888776654   5577 89999998864

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=85.70  E-value=0.44  Score=36.59  Aligned_cols=53  Identities=17%  Similarity=0.375  Sum_probs=38.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...    ...+++++..+   |+..|.|++|.|+.++..
T Consensus        47 F~~~D~d~~G~I~~~el-~~~l~~~~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~  103 (108)
T 1rro_A           47 FRFIDNDQSGYLDGDEL-KYFLQKFQSDARELTESETKSL---MDAADNDGDGKIGADEFQ  103 (108)
T ss_dssp             HHHHCTTCSSEECTHHH-HTGGGGTCTTSCCCCHHHHHHH---HHHHCCSSSSSEEHHHHH
T ss_pred             HHHhCCCCCCcCCHHHH-HHHHHHHhhccCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            45568899999998885 3445554    24677776654   556699999999998764

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=85.65  E-value=0.93  Score=34.21  Aligned_cols=53  Identities=19%  Similarity=0.295  Sum_probs=37.4

Q ss_pred             hhhhh-cCCCC-ccchhHHHHHHHHH---hcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAAD-MNHNG-FISKSEYVIFKLKE---MGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~-~d~~~-~~~~~e~~~~~L~~---~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...| .|.+| .++..|.. ..+..   .|..+++++..+   |++.|.|++|.|+.++.+
T Consensus        16 F~~~D~~d~dG~~I~~~El~-~~l~~~~~~~~~~~~~i~~~---~~~~D~d~dG~I~f~EF~   73 (92)
T 2kax_A           16 FHKYSGREGSKLTLSRKELK-ELIKKELCLGEMKESSIDDL---MKSLDKNSDQEIDFKEYS   73 (92)
T ss_dssp             HHHHHTTSSCSSEEEHHHHH-HHHHHHSCCTTTCCTTHHHH---HHHHTTTCSSEEEHHHHH
T ss_pred             HHHHHhhCCCCCeeCHHHHH-HHHHHHcCCCCCCHHHHHHH---HHHhCCCCCCcCcHHHHH
Confidence            44567 78899 99988754 44544   224777777755   456699999999988754

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=85.63  E-value=0.8  Score=39.23  Aligned_cols=54  Identities=20%  Similarity=0.408  Sum_probs=37.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-------CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-------KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+.. .+...+       ..+.++  .+..-|+..|.|+||.|+.+++.
T Consensus        94 F~~~D~d~~G~I~~~Ef~~-~~~~~~~~~~~~~~~~~~~--~~~~~f~~~D~d~dG~I~~~Ef~  154 (198)
T 2r2i_A           94 FKLYDVDGNGCIDRGELLN-IIKAIRAINRCNEAMTAEE--FTNMVFDKIDINGDGELSLEEFM  154 (198)
T ss_dssp             HHHHCTTCSSCEEHHHHHH-HHHHTTGGGGSSSCCCHHH--HHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHhcCCCCCcCcHHHHHH-HHHHHHhhcCCCchhhHHH--HHHHHHHHhCCCCCCcCcHHHHH
Confidence            3456889999999888653 444443       334333  23456788899999999999875

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=85.39  E-value=1.2  Score=36.30  Aligned_cols=53  Identities=15%  Similarity=0.328  Sum_probs=38.6

Q ss_pred             hhhhhcCC-CCccchhHHHHHHHHHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNH-NGFISKSEYVIFKLKEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~-~~~~~~~e~~~~~L~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.++ +|.++..|+. ..+...|. .+++++..   -|...|.|++|.|+.++..
T Consensus        24 F~~~D~~~~~G~i~~~e~~-~~l~~~~~~~~~~~~~~---~~~~~D~~~~g~i~~~eF~   78 (161)
T 1dtl_A           24 FDIFVLGAEDGSISTKELG-KVMRMLGQNPTPEELQE---MIDEVDEDGSGTVDFDEFL   78 (161)
T ss_dssp             HHHHTTTCGGGSBCHHHHH-HHHHHTTCCCCHHHHHH---HHHHHCTTSSSSBCHHHHH
T ss_pred             HHHHcCCCCCCcCcHHHHH-HHHHHcCCCCCHHHHHH---HHHHhCCCCCCeEcHHHHH
Confidence            34568888 9999988754 45556553 56666654   4666799999999998864

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=85.31  E-value=1.4  Score=36.81  Aligned_cols=41  Identities=15%  Similarity=0.404  Sum_probs=32.3

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP  381 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~  381 (388)
                      .+ +.+|.++..||+.....         ...+.+.|+..|.|++|.|+.+
T Consensus       122 ~d-d~dg~i~~~eF~~~~~~---------~~~~~~~F~~~D~d~~G~i~~~  162 (173)
T 1alv_A          122 YS-DEGGNMDFDNFISCLVR---------LDAMFRAFKSLDKDGTGQIQVN  162 (173)
T ss_dssp             HT-CSSSCBCHHHHHHHHHH---------HHHHHHHHHHHSSSCCSEEEEE
T ss_pred             hc-CCCCcCcHHHHHHHHHH---------HHHHHHHHHHhCCCCCCeecHh
Confidence            45 78899998888755433         2567788999999999999976

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=85.20  E-value=0.28  Score=42.23  Aligned_cols=53  Identities=21%  Similarity=0.409  Sum_probs=31.9

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...| ++++++..+   |+..|.|++|.|+.++..
T Consensus        87 ~F~~~D~d~dG~Is~~El~-~~l~~~g-~~~~~~~~~---~~~~D~d~dG~Is~~EF~  139 (188)
T 1s6i_A           87 AFSYFDKDGSGYITLDEIQ-QACKDFG-LDDIHIDDM---IKEIDQDNDGQIDYGEFA  139 (188)
T ss_dssp             HHHHTTTTCSSEEEHHHHH-HTTTTTT-CCTTHHHHH---HHHHCSSSSSEEETTHHH
T ss_pred             HHHHHCCCCCCcCcHHHHH-HHHHHcC-CCHHHHHHH---HHHHCCCCCCcEeHHHHH
Confidence            3455667777777766643 3344444 555555443   555677777877777654

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=85.12  E-value=0.4  Score=42.62  Aligned_cols=54  Identities=19%  Similarity=0.292  Sum_probs=32.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc--CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG--KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g--~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|.+|.++..|+. ..+...+  .++.++   +..-|...|.|+||.|+.++..
T Consensus       138 ~F~~~D~d~dG~Is~~El~-~~l~~~~~~g~~~~e---~~~~~~~~D~d~dG~Is~~EF~  193 (226)
T 2lvv_A          138 MFDTMDKDGSLLLELQEFK-EALPKLKEWGVDITD---ATTVFNEIDTNGSGVVTFDEFS  193 (226)
T ss_dssp             HHHHHSCSSCCEECHHHHH-HHHHHHHHHTCCCCS---CHHHHHHHCCSCSSCEEHHHHH
T ss_pred             HHHHHcCCCCCeEcHHHHH-HHHHHHhhcCCCHHH---HHHHHHHhCCCCCCcEeHHHHH
Confidence            3455677777877777643 3333331  233333   3455666778888888877654

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=85.10  E-value=0.71  Score=38.99  Aligned_cols=54  Identities=26%  Similarity=0.432  Sum_probs=36.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH---hc---------CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE---MG---------KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~---~g---------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-..   .|         ..++++   +.+-|+..|.|++|.|+.++..
T Consensus       105 f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~---~~~~f~~~D~d~dG~i~~~ef~  170 (190)
T 1g8i_A          105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKR---VDRIFAMMDKNADGKLTLQEFQ  170 (190)
T ss_dssp             HHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHH---HHHHHHHHCSSCSSEEEHHHHH
T ss_pred             HHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHH---HHHHHHHhcCCCCCcEeHHHHH
Confidence            455688999999988865432221   23         233444   4456778899999999998865

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=85.04  E-value=0.91  Score=39.05  Aligned_cols=52  Identities=12%  Similarity=0.155  Sum_probs=32.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....  ..| .++++++..+   |...|.|++|.|+.++.+
T Consensus       132 F~~~D~d~~G~Is~~El~~~l--~~g~~~~~~~~~~l---~~~~D~d~dG~I~~~EF~  184 (196)
T 3dtp_E          132 FNLFDEGDGKCKEETLKRSLT--TWGEKFSQDEVDQA---LSEAPIDGNGLIDIKKFA  184 (196)
T ss_dssp             HHTTCSSSSCCBHHHHHHHHH--HSSSCCCHHHHHHH---HHSSCEETTEECHHHHHH
T ss_pred             HHHHCCCCCCcCcHHHHHHHH--HcCCCCCHHHHHHH---HHHcCCCCCCEEeHHHHH
Confidence            344567777777777654333  444 4566665544   455577778887777654

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=85.03  E-value=0.91  Score=37.51  Aligned_cols=53  Identities=13%  Similarity=0.263  Sum_probs=37.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...|...| ..+++++..+.   ...|.|++|.|+.++..
T Consensus        56 F~~~D~d~~G~I~~~el-~~~l~~~g~~~~~~e~~~l~---~~~D~d~dg~I~~~eF~  109 (150)
T 2jjz_A           56 YMEFDLNNEGEIDLMSL-KRMMEKLGVPKTHLEMKKMI---SEVTGGVSDTISYRDFV  109 (150)
T ss_dssp             HTTSCCCTTSSBCHHHH-HHHHHHTTCCCCHHHHHHHH---HHHHTTSCSSBCHHHHH
T ss_pred             HHHhCCCCcCcCCHHHH-HHHHHHcCCCCCHHHHHHHH---HHHCCCCCCcEeHHHHH
Confidence            34467888999998775 45566665 56777776554   45578899999988754

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=84.92  E-value=1  Score=37.63  Aligned_cols=56  Identities=27%  Similarity=0.370  Sum_probs=42.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.|++|.++..|. ...|...| +++++++.++.+.++ .+.|++|.|+-++.+
T Consensus        90 aF~~fD~d~~G~I~~~el-~~~l~~~g~~ls~~e~~~l~~~~D-~~~d~dG~I~~~EF~  146 (159)
T 3i5g_C           90 AFKTFDREGQGLISSAEI-RNVLKMLGERITEDQCNDIFTFCD-IREDIDGNIKYEDLM  146 (159)
T ss_dssp             HHHHHCTTSSSEECHHHH-HHHHHHSSSCCCHHHHHHHHHHTT-CCCCSSCCEEHHHHH
T ss_pred             HHHHHhcCCCCcCcHHHH-HHHHHHhCCCCCHHHHHHHHHHhC-cCCCCCCeEeHHHHH
Confidence            456678999999998874 55666664 678999988876552 235899999988754

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=84.75  E-value=1.4  Score=35.12  Aligned_cols=53  Identities=17%  Similarity=0.275  Sum_probs=36.0

Q ss_pred             hhhhh-cCCCC-ccchhHHHHHHHHH-----hc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAAD-MNHNG-FISKSEYVIFKLKE-----MG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~-~d~~~-~~~~~e~~~~~L~~-----~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...| .|.+| .++..|. ...|..     +| +.+++++.++   +++.|.|+||.|+.++.+
T Consensus        28 F~~fD~~dgdGG~Is~~EL-~~~l~~~l~~~lg~~~t~~ev~~l---i~~~D~dgdG~Idf~EF~   88 (113)
T 2lnk_A           28 FHKYSGKEGDKFKLNKSEL-KELLTRELPSFLGKRTDEAAFQKL---MSNLDSNRDNEVDFQEYC   88 (113)
T ss_dssp             HHHTTTTTSCTTCBCHHHH-HHHHHHHCGGGGTTCCCTTHHHHH---HHHHCSSSSSCBCHHHHH
T ss_pred             HHHHcccCCCCCEECHHHH-HHHHHHHcchhcCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            34456 57776 8988774 444443     22 4577777765   456799999999998754

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=84.64  E-value=0.74  Score=35.93  Aligned_cols=52  Identities=13%  Similarity=0.130  Sum_probs=34.9

Q ss_pred             hhhh-cCCC-CccchhHHHHHHHHH-h-----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAAD-MNHN-GFISKSEYVIFKLKE-M-----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~-~d~~-~~~~~~e~~~~~L~~-~-----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...| .|.+ |.++..|. ...+.. .     .+.++++++++.+   ++|.|+||.|+.++-+
T Consensus        17 ~~fd~~dg~~G~Is~~EL-~~~l~~~l~~~lg~~~~~~ev~~~i~---~~D~dgDG~Idf~EF~   76 (101)
T 3nso_A           17 QEYAGRCGDKYKLCQAEL-KELLQKELATWTPTEFRECDYNKFMS---VLDTNKDCEVDFVEYV   76 (101)
T ss_dssp             HHHHTTSSCTTEECHHHH-HHHHHHHTTTCCCCTTCHHHHHHHHH---HHHHCCCSCEEHHHHH
T ss_pred             HHHhhcCCCCCEECHHHH-HHHHHHHhhhhcCCCCCHHHHHHHHH---HhCCCCCCCCcHHHHH
Confidence            3444 4555 89998874 445553 3     3567777776555   5688999999988743

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=84.52  E-value=0.39  Score=41.50  Aligned_cols=61  Identities=15%  Similarity=0.036  Sum_probs=38.2

Q ss_pred             ccchhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          322 EITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       322 ~~t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..+..++..+....+|.++-.||+...........  ....+...|+..|.|++|.|+.+++.
T Consensus        89 ~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~--~~~~l~~~F~~~D~d~~G~Is~~El~  149 (196)
T 3dtp_E           89 LCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTD--EEDVIVNAFNLFDEGDGKCKEETLKR  149 (196)
T ss_dssp             CCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSC--CHHHHHHHHHTTCSSSSCCBHHHHHH
T ss_pred             CCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCC--cHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            34444444443333788888888765544333222  22345677888899999999988874

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=84.47  E-value=0.24  Score=36.17  Aligned_cols=28  Identities=29%  Similarity=0.352  Sum_probs=22.6

Q ss_pred             hHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          357 EKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       357 ~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++....+.+.|...|.|++|.|+.+|+.
T Consensus         3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~   30 (83)
T 1yx7_A            3 CKVKAELEAAFKKLDANGDGYVTALELQ   30 (83)
T ss_dssp             SCSCTHHHHHHHHHSSSCSSSCSHHHHH
T ss_pred             ccHHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            3445567788999999999999999874

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=84.46  E-value=0.74  Score=45.64  Aligned_cols=53  Identities=17%  Similarity=0.313  Sum_probs=40.6

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|+||.++..|+. ..+.. ..++++++.++   |++.|.|+||.|+.+|..
T Consensus       423 ~F~~~D~d~dG~I~~~El~-~~l~~-~~~~~~~~~~~---~~~~D~d~dG~i~~~Ef~  475 (484)
T 3nyv_A          423 AFRMFDSDNSGKISSTELA-TIFGV-SDVDSETWKSV---LSEVDKNNDGEVDFDEFQ  475 (484)
T ss_dssp             HHHHHCTTCCSEEEHHHHH-HHHHH-TTCCHHHHHHH---HHHHCTTCCSEEEHHHHH
T ss_pred             HHHHHCCCCCCcCCHHHHH-HHHHh-cCCCHHHHHHH---HHHhcCCCCCcCCHHHHH
Confidence            4566789999999988864 34444 67788887755   666799999999998864

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=84.14  E-value=0.83  Score=38.62  Aligned_cols=54  Identities=30%  Similarity=0.437  Sum_probs=37.1

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH---hc---------CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE---MG---------KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~---~g---------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+....-..   .|         ..+++++   .+-|+..|.|+||.|+.++..
T Consensus       105 f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~f~~~D~d~dG~I~~~Ef~  170 (190)
T 2l2e_A          105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRV---NKIFNMMDKNKDGQLTLEEFC  170 (190)
T ss_dssp             HHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHH---HHHHHHHTCCSSCCBCHHHHH
T ss_pred             HhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHH---HHHHHHhCCCCCCcCcHHHHH
Confidence            345688899999998875433221   22         2344444   456778899999999999874

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=84.12  E-value=2  Score=33.54  Aligned_cols=48  Identities=17%  Similarity=0.232  Sum_probs=32.1

Q ss_pred             cCCC-CccchhHHHHHHHHH-hc-----CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHN-GFISKSEYVIFKLKE-MG-----KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~-~~~~~~e~~~~~L~~-~g-----~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+ |.++..|. ...|.. .|     ..+++++.++   +++.|.|+||.|+.++-+
T Consensus        25 ~dgd~G~Is~~EL-~~~l~~~lg~~l~~~~~~~ev~~~---i~~~D~dgDG~Idf~EF~   79 (104)
T 3zwh_A           25 KEGDKFKLNKSEL-KELLTRELPSWLGKRTDEAAFQKL---MSNLDSNRDNEVDFQEYC   79 (104)
T ss_dssp             SSSSTTSBCHHHH-HHHHHHHCGGGSCSSCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             cCCCCCeECHHHH-HHHHHHHcchhccCCCCHHHHHHH---HHHHcCCCCCCCcHHHHH
Confidence            3443 68998874 444543 44     3467777655   556799999999988743

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1

Probab=83.90  E-value=0.61  Score=33.27  Aligned_cols=53  Identities=17%  Similarity=0.353  Sum_probs=37.5

Q ss_pred             hhhhhc-CCCC-ccchhHHHHHHHHH-hcC-C-ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADM-NHNG-FISKSEYVIFKLKE-MGK-I-GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~-d~~~-~~~~~e~~~~~L~~-~g~-i-~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|. +++| .++..|+. ..+.. .|. . +++++..+   |...|.|++|.|+.++..
T Consensus        13 F~~~D~~d~~G~~i~~~el~-~~l~~~~g~~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~   70 (78)
T 1cb1_A           13 FEKYAAKEGDPNQLSKEELK-QLIQAEFPSLLKGPRTLDDL---FQELDKNGDGEVSFEEFQ   70 (78)
T ss_dssp             HHHHHTTSSSTTEECHHHHH-HHHHHHCSSCCSSCCCSSHH---HHHTCCCSSSSEEHHHHH
T ss_pred             HHHHhccCCCcCEeCHHHHH-HHHHHHhhhhcccHHHHHHH---HHHhcCCCCCCCcHHHHH
Confidence            345677 8899 99988854 44543 553 4 67666654   566799999999998764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=83.70  E-value=0.98  Score=38.87  Aligned_cols=56  Identities=18%  Similarity=0.231  Sum_probs=38.8

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----c-----CCChH---HHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----G-----KIGEK---DISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g-----~i~~e---~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|.+|.++..|+.. .+...    |     +++++   .-..+.+-|+..|.|++|.|+.++..
T Consensus       113 f~~~D~d~~G~I~~~E~~~-~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  180 (207)
T 2d8n_A          113 FSLYDVDGNGTISKNEVLE-IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFI  180 (207)
T ss_dssp             HHHHCTTCSSEECHHHHHH-HHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHH
T ss_pred             HHHhcCCCCCeEcHHHHHH-HHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHH
Confidence            4557889999999988754 33333    3     44432   12345566888899999999999875

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=83.62  E-value=0.78  Score=36.09  Aligned_cols=30  Identities=17%  Similarity=0.237  Sum_probs=27.1

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+++++..++.+.|+.+|. +||+|+.+++.
T Consensus         8 ~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~   37 (106)
T 1eh2_A            8 AVKPEDKAKYDAIFDSLSP-VNGFLSGDKVK   37 (106)
T ss_dssp             SSCHHHHHHHHHHHTTSCC-SSSCCBHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCC-CCCeEcHHHHH
Confidence            4678999999999999999 99999999874

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=83.57  E-value=0.95  Score=40.05  Aligned_cols=56  Identities=30%  Similarity=0.534  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cC-----CChHH-HHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GK-----IGEKD-ISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~-----i~~e~-i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+... +...    |.     ++++. -..+.+-|++.|.|+||.|+.++..
T Consensus       131 F~~~D~d~dG~Is~~E~~~~-l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~  196 (224)
T 1s1e_A          131 FNLYDINKDGYINKEEMMDI-VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL  196 (224)
T ss_dssp             HHHHCTTCCSEECHHHHHHH-HHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHH
T ss_pred             HHHHcCCCCCeECHHHHHHH-HHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            45678899999999886543 3332    43     33321 2344566888899999999999865

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=83.47  E-value=1.1  Score=37.54  Aligned_cols=56  Identities=30%  Similarity=0.516  Sum_probs=36.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cC-----CChHH-HHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GK-----IGEKD-ISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~-----i~~e~-i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+.. .+...    |.     ++++. -.++.+-|+..|.|++|.|+.++..
T Consensus        98 f~~~D~d~~G~i~~~e~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~  163 (183)
T 1s6c_A           98 FNLYDINKDGYINKEEMMD-IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL  163 (183)
T ss_dssp             HHHHCTTCSSCEEHHHHHH-HHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHhCCCCCCeEcHHHHHH-HHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            4556889999999888654 33332    43     33311 1344556788899999999999875

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=83.43  E-value=2  Score=33.76  Aligned_cols=54  Identities=13%  Similarity=0.248  Sum_probs=37.5

Q ss_pred             hhhhhhc-CCCC-ccchhHHHHHHHH-HhcC------CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADM-NHNG-FISKSEYVIFKLK-EMGK------IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~-d~~~-~~~~~e~~~~~L~-~~g~------i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|. |.+| .++..|.. ..|. ..|.      .+++++.   +-|+++|.|+||.|+.++.+
T Consensus        17 ~F~~fD~~dgdG~~Is~~El~-~~l~~~lg~~~~~~~~~~~~v~---~l~~~~D~d~dG~I~f~EF~   79 (113)
T 1xk4_C           17 TFHQYSVKLGHPDTLNQGEFK-ELVRKDLQNFLKKENKNEKVIE---HIMEDLDTNADKQLSFEEFI   79 (113)
T ss_dssp             HHHHHHTTSSSTTSBCHHHHH-HHHHHHTTTTTTTGGGCHHHHH---HHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHhhcCCCCCEECHHHHH-HHHHHHhhhhhcccccCHHHHH---HHHHHhCCCCCCCEeHHHHH
Confidence            3455674 8899 99988754 4455 5553      3566555   45667799999999998754

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=83.06  E-value=1.3  Score=36.40  Aligned_cols=52  Identities=25%  Similarity=0.360  Sum_probs=33.7

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|.++..||+........   ......+...|+..|.|++|.|+.+|+.
T Consensus        71 ~~d~~~~g~i~~~ef~~~~~~~~~---~~~~~~~~~~F~~~D~d~~G~i~~~e~~  122 (166)
T 2aao_A           71 AADVDNSGTIDYKEFIAATLHLNK---IEREDHLFAAFTYFDKDGSGYITPDELQ  122 (166)
T ss_dssp             HHCTTCCSSBCHHHHHHHHTTCHH---HHTTHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             HhCCCCCCeEcHHHHHHHHHHHhh---cccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            346677777777777644322111   1222456677888899999999988874

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=82.89  E-value=0.73  Score=45.93  Aligned_cols=51  Identities=24%  Similarity=0.405  Sum_probs=25.8

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +|.|.+|.++..||+.........  ......+.+.|+..|.|++|.|+.+|+
T Consensus       357 ~D~DgdG~IsfeEFl~ll~~~~~~--~~~~e~l~~aFk~fD~D~dG~Is~eEL  407 (450)
T 3sg6_A          357 VDADGNGTIDFPEFLTMMARKMKD--TDSEEEIREAFRVFDKDGNGYISAAEL  407 (450)
T ss_dssp             TCTTSSSSEEHHHHHHHHHC--------CHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred             hccCCCCcccHHHHHHHHHhhccc--cchhhHHHHHHHHhCCCCCCeEeHHHH
Confidence            455666666666665433322111  111223445566666666776666665

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=82.87  E-value=0.68  Score=40.04  Aligned_cols=31  Identities=26%  Similarity=0.517  Sum_probs=25.3

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++++++..+.+.|..+|.|++|.|+.+|+.
T Consensus        50 ~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~   80 (197)
T 3pm8_A           50 HLCDVEINNLRNIFIALDVDNSGTLSSQEIL   80 (197)
T ss_dssp             HCCHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HCCHHHHHHHHHHHHHHCCCCCCcCCHHHHH
Confidence            3578888888888888888888888888774

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=82.82  E-value=1.2  Score=40.20  Aligned_cols=56  Identities=25%  Similarity=0.523  Sum_probs=37.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCC------ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKI------GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i------~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+... +...    |..      .+..-..+.+-|++.|.|+||.|+.+|+.
T Consensus       171 F~~~D~d~dG~I~~~Ef~~~-l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~  236 (256)
T 2jul_A          171 FNLYDINKDGCITKEEMLAI-MKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFL  236 (256)
T ss_dssp             HHHTCCSSSSCBCHHHHHHH-HHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHH
T ss_pred             HHHhCCCCCCcCcHHHHHHH-HHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHH
Confidence            34578899999998886543 3322    421      11122344566888899999999999875

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A

Probab=82.80  E-value=0.75  Score=33.85  Aligned_cols=53  Identities=17%  Similarity=0.330  Sum_probs=36.9

Q ss_pred             hhhhhc-CCCC-ccchhHHHHHHHHH---hc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADM-NHNG-FISKSEYVIFKLKE---MG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~-d~~~-~~~~~e~~~~~L~~---~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|. +++| .++..|. ...+..   .| ..+++++..+   |+..|.|++|.|+.++..
T Consensus        16 F~~~D~~d~~G~~i~~~el-~~~l~~~~~~g~~~~~~~~~~~---~~~~D~~~dg~i~~~eF~   74 (90)
T 1k8u_A           16 FHKYSGREGDKHTLSKKEL-KELIQKELTIGSKLQDAEIARL---MEDLDRNKDQEVNFQEYV   74 (90)
T ss_dssp             HHHHHTSSSCTTEEEHHHH-HHHHHHHSCCGGGTTSHHHHHH---HHHHHHTTTCEEEHHHHH
T ss_pred             HHHHhccCCCCCcCCHHHH-HHHHHHhcccCCCCCHHHHHHH---HHHhCCCCCCCCcHHHHH
Confidence            445674 8999 9998874 345554   44 4566776655   455678999999998754

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=82.72  E-value=2.1  Score=36.07  Aligned_cols=53  Identities=30%  Similarity=0.398  Sum_probs=39.3

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+ ...+...|. +++   ++..-|...|.|++|.|+.++..
T Consensus        44 ~F~~~D~d~~G~i~~~El-~~~l~~~g~-~~~---~~~~~~~~~D~d~~g~i~~~Ef~   96 (180)
T 3mse_B           44 LFYKLDTNHNGSLSHREI-YTVLASVGI-KKW---DINRILQALDINDRGNITYTEFM   96 (180)
T ss_dssp             HHHHHCTTCSSSEEHHHH-HHHHHHTTC-CHH---HHHHHHHHHCTTCCSEECHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHH-HHHHHHcCC-CHH---HHHHHHHHhCCCCCCcCcHHHHH
Confidence            345678899999998885 456666664 344   45566778899999999998864

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=82.64  E-value=1.1  Score=42.41  Aligned_cols=54  Identities=19%  Similarity=0.256  Sum_probs=35.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHH-HHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKL-KEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L-~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+ ...| .++++++..+   |...|.|+||.|+.++..
T Consensus       258 ~F~~~D~d~dG~Is~~El~-~~l~~~~g~~ls~~e~~~l---~~~~D~d~dG~Is~~EF~  313 (323)
T 1ij5_A          258 LYAFADFDKSGQLSKEEVQ-KVLEDAHIPESARKKFEHQ---FSVVDVDDSKSLSYQEFV  313 (323)
T ss_dssp             HHHHTCSSSCSSEEHHHHH-HHHHHTTCCGGGCSTHHHH---HHHHTTTTCSEECHHHHH
T ss_pred             HHHHhCCCCCCCccHHHHH-HHHHHHcCCCCCHHHHHHH---HHHHCCCCCCcEeHHHHH
Confidence            3455677888888877753 344 4444 3566666544   455678888888888764

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=82.56  E-value=0.85  Score=40.06  Aligned_cols=54  Identities=19%  Similarity=0.322  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc--CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG--KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g--~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+...|  .++++++..+   |+..|.|++|.|+.++..
T Consensus       135 ~F~~~D~d~~G~Is~~El~-~~l~~~g~~~~~~~e~~~l---~~~~D~d~dG~I~~~EF~  190 (219)
T 3cs1_A          135 MFDEIDASGNMLVDEEEFK-RAVPKLEAWGAKVEDPAAL---FKELDKNGTGSVTFDEFA  190 (219)
T ss_dssp             HHHTTCSSSSSEEEHHHHH-HHHHHHHHHTCCCSCHHHH---HHHHCTTSSSEEEHHHHH
T ss_pred             HHHHHCCCCCCcCcHHHHH-HHHHHhcccCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            3456788999999988854 4555566  5888887655   566799999999998764

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=82.54  E-value=0.67  Score=34.88  Aligned_cols=53  Identities=21%  Similarity=0.222  Sum_probs=36.5

Q ss_pred             hhhhhc-CCCC-ccchhHHHHHHH-HHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADM-NHNG-FISKSEYVIFKL-KEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~-d~~~-~~~~~e~~~~~L-~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|. |++| .++..|.. ..+ ...|. .+++++   .+-|+..|.|++|.|+.++.+
T Consensus        16 F~~~D~~d~dG~~I~~~El~-~~l~~~~g~~~~~~~~---~~l~~~~D~d~dG~I~~~EF~   72 (93)
T 1xk4_A           16 YHKYSLIKGNFHAVYRDDLK-KLLETESPQYIRKKGA---DVWFKELDINTDGAVNFQEFL   72 (93)
T ss_dssp             HHHHHTSSSCTTCBCHHHHH-HHHHHHSCHHHHTTCH---HHHHHHHCTTCSSSBCHHHHH
T ss_pred             HHHHhhcCCCcCeECHHHHH-HHHHHHCcccCCHHHH---HHHHHHhCCCCCCCCcHHHHH
Confidence            445677 8999 99988853 444 44543 334444   455778899999999988754

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=82.49  E-value=1.6  Score=35.93  Aligned_cols=39  Identities=23%  Similarity=0.282  Sum_probs=27.3

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChh
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP  381 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~  381 (388)
                      +++|.++..||+......         ..+.+.|+..|.|++|.|+.+
T Consensus       116 d~dg~i~~~eF~~~~~~~---------~~~~~~F~~~D~d~~G~i~~~  154 (165)
T 1k94_A          116 SKNGRIFFDDYVACCVKL---------RALTDFFRKRDHLQQGSANFI  154 (165)
T ss_dssp             CBTTBCBHHHHHHHHHHH---------HHHHHHHHTTCTTCCSEEEEE
T ss_pred             CCCCeEcHHHHHHHHHHH---------HHHHHHHHHhCCCCCCeEeee
Confidence            667777777765443322         456677888899999988776

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=82.43  E-value=0.36  Score=37.13  Aligned_cols=53  Identities=19%  Similarity=0.322  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...    ...+++++..   -|...|.|++|.|+.++..
T Consensus        47 F~~~D~d~~G~I~~~el~-~~l~~~~~~g~~~~~~~~~~---~~~~~D~d~dg~i~~~eF~  103 (108)
T 2kyc_A           47 FRILDNDQSGFIEEDELK-YFLQRFESGARVLTASETKT---FLAAADHDGDGKIGAEEFQ  103 (108)
T ss_dssp             CSSSCSCCSSCCCGGGTT-TSHHHHSSSCCCCCTTTTHH---HHTTTCCSSSSCCCSSHHH
T ss_pred             HHHhCCCCCCeEcHHHHH-HHHHHHhhccCCCCHHHHHH---HHHHhCCCCCCcCCHHHHH
Confidence            345688899999988753 344444    3577777664   4566799999999998764

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=82.03  E-value=3.2  Score=31.43  Aligned_cols=46  Identities=17%  Similarity=0.253  Sum_probs=30.7

Q ss_pred             CC-CCccchhHHHHHHHHH-hc-----CCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          334 NH-NGFISKSEYVIFKLKE-MG-----KIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       334 d~-~~~~~~~e~~~~~L~~-~g-----~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      |. +|.++..|. ...+.. .|     ..+++++.++   +++.|.|+||.|+.++-
T Consensus        23 dg~~G~Is~~EL-~~~l~~~lg~~l~~~~~~~ev~~~---i~~~D~d~DG~Idf~EF   75 (93)
T 4eto_A           23 EGDKFKLNKSEL-KELLTRELPSFLGKRTDEAAFQKL---MSNLDSNRDNEVDFQEY   75 (93)
T ss_dssp             SSSTTSBCHHHH-HHHHHHHCGGGC---CCHHHHHHH---HHHHCTTSSSSBCHHHH
T ss_pred             CCCCCeECHHHH-HHHHHHHhhhhccCCCCHHHHHHH---HHHHCCCCCCCCcHHHH
Confidence            44 378998874 444443 44     3466666655   55679999999998874

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=81.79  E-value=1.6  Score=38.55  Aligned_cols=46  Identities=9%  Similarity=0.080  Sum_probs=33.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhc-CCCCCC------ccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRL-DPNNCG------KITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~l-d~~~~g------~l~~~d~~  384 (388)
                      ...| |+||.++-.||+..+...         ..+.+.|++. |.+++|      .++.++.+
T Consensus       160 ~~~d-d~dg~I~~~eF~~~~~~l---------~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~  212 (220)
T 3sjs_A          160 RLFA-RGMAFCDLNCWIAICAFA---------AQTRSAYQMIFMNPYYGPMKPFNPMEFGKFL  212 (220)
T ss_dssp             HHHC---CCSEEHHHHHHHHHHH---------HHHHHHHHHHHTSGGGCSCCCCCHHHHHHHH
T ss_pred             HHhc-CCCCcCcHHHHHHHHHHH---------HHHHHHHHHhcccCCCCCcccccceeHHHHH
Confidence            3456 889999999988766543         3677889998 999999      67776654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=81.56  E-value=0.47  Score=47.23  Aligned_cols=54  Identities=17%  Similarity=0.298  Sum_probs=29.3

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|+||.++..|+. ..+...| +++++++++   -|++.|.|+||.|+.+|..
T Consensus       422 ~F~~~D~d~dG~Is~~El~-~~l~~~g~~~~~~~~~~---~~~~~D~d~dG~I~~~EF~  476 (486)
T 3mwu_A          422 AFKMFDKDGSGKISTKELF-KLFSQADSSIQMEELES---IIEQVDNNKDGEVDFNEFV  476 (486)
T ss_dssp             HHHHHCSSCSSSBCSSCC------------------------CCCCSSCSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHH-HHHHHcCCCCCHHHHHH---HHHHhCCCCCCcEeHHHHH
Confidence            3455788999999988853 3444443 456666654   4778899999999998864

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=81.56  E-value=0.97  Score=36.82  Aligned_cols=52  Identities=13%  Similarity=0.167  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| .++++++..+   |+..|.| +|.|+.++..
T Consensus        93 F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~~~~~~---~~~~d~~-dg~i~~~eF~  145 (156)
T 1wdc_B           93 FAMFDEQETKKLNIEYIK-DLLENMGDNFNKDEMRMT---FKEAPVE-GGKFDYVKFT  145 (156)
T ss_dssp             HHTTCTTCCSCEEHHHHH-HHHHHSSSCCCHHHHHHH---HHHCCEE-TTEECHHHHH
T ss_pred             HHHHCcCCCCccCHHHHH-HHHHHhCCCCCHHHHHHH---HHhcCCC-CCEEeHHHHH
Confidence            455688999999988854 4455554 5778887766   4556888 9999998864

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=81.37  E-value=0.87  Score=35.11  Aligned_cols=28  Identities=18%  Similarity=0.319  Sum_probs=25.3

Q ss_pred             hHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          357 EKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       357 ~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+..+.+.|...|.|++|.|+.+|+.
T Consensus        28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~   55 (107)
T 2d58_A           28 PSKLEGFKEKYMEFDLNGNGDIDIMSLK   55 (107)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            6778889999999999999999999874

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=81.35  E-value=0.63  Score=32.49  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=21.3

Q ss_pred             HHHHHHHhhhcCCCCCCccChhhhc
Q 016527          360 ISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       360 i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..++.+.|+..|.|++|.|+.+|+.
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el~   29 (71)
T 2b1u_A            5 LEDLQVAFRAFDQDGDGHITVDELR   29 (71)
T ss_dssp             HHHHHHHHTTSCCSSSSEEEHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            4556788999999999999999874

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=80.71  E-value=1.5  Score=37.54  Aligned_cols=39  Identities=26%  Similarity=0.486  Sum_probs=28.5

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChh
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLP  381 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~  381 (388)
                      |.+|.++..||+......         ..+.+.|+..|.|++|.|+.+
T Consensus       149 d~dg~i~~~eF~~~~~~~---------~~~~~~F~~~D~d~~G~is~~  187 (198)
T 1juo_A          149 STNGKITFDDYIACCVKL---------RALTDSFRRRDTAQQGVVNFP  187 (198)
T ss_dssp             CSSSSEEHHHHHHHHHHH---------HHHHHHHHHTCTTCCSEEEEE
T ss_pred             CCCCeEcHHHHHHHHHHH---------HHHHHHHHHhCCCCCCeEeec
Confidence            677777777776544332         456678899999999999874

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=80.69  E-value=1.1  Score=38.54  Aligned_cols=53  Identities=15%  Similarity=0.121  Sum_probs=36.7

Q ss_pred             hhhhcC-CCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMN-HNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d-~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+ .+|.++..|+ ...+...|.  ...-..+.+-|+..|.|++|.|+.+++.
T Consensus        29 ~~~D~~~~~G~i~~~e~-~~~l~~~~~--~~~~~~~~~~f~~~D~d~~G~i~~~Ef~   82 (204)
T 1jba_A           29 KKFLEECPSGTLFMHEF-KRFFKVPDN--EEATQYVEAMFRAFDTNGDNTIDFLEYV   82 (204)
T ss_dssp             HHHHSSSTTCCEEHHHH-HHHHHCCSS--STTHHHHHHHHHHHCCSSSSEECHHHHH
T ss_pred             HHHHhhCCCCCcCHHHH-HHHHHHhcC--CCcHHHHHHHHHHHcCCCCCeEeHHHHH
Confidence            345777 7999998885 345555554  2223344456788899999999999875

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=80.39  E-value=1.4  Score=37.76  Aligned_cols=53  Identities=25%  Similarity=0.464  Sum_probs=34.0

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++..||+..... ......  -..+...|+..|.|++|.|+.+|+.
T Consensus        53 ~~~D~d~dG~I~~~EF~~~~~~-~~~~~~--~~~l~~~F~~~D~d~dG~Is~~El~  105 (188)
T 1s6i_A           53 DAADIDKSGTIDYGEFIAATVH-LNKLER--EENLVSAFSYFDKDGSGYITLDEIQ  105 (188)
T ss_dssp             HHTCTTCSSEECHHHHHHHHTT-SSSSCC--CCSTHHHHHHTTTTCSSEEEHHHHH
T ss_pred             HHcCCCCCCeEeHHHHHHHHHH-HhccCH--HHHHHHHHHHHCCCCCCcCcHHHHH
Confidence            3456777888888887654322 221111  1234567888899999999988875

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=80.32  E-value=1.1  Score=39.37  Aligned_cols=32  Identities=16%  Similarity=0.314  Sum_probs=29.6

Q ss_pred             cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          353 GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       353 g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...+++++.++.+.|+.+|.|++|.|+.+|+.
T Consensus        40 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~   71 (219)
T 3cs1_A           40 REKTAEAKQRRIELFKKFDKNETGKLCYDEVY   71 (219)
T ss_dssp             CSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            56789999999999999999999999999985

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=80.20  E-value=2  Score=36.56  Aligned_cols=48  Identities=17%  Similarity=0.234  Sum_probs=32.3

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++|.++..+|.... .....  .+....+...|+..|.|+||.|+.++|.
T Consensus        74 ~~~~~i~~~ef~~~~-~~~~~--~~~~~~l~~~F~~~D~d~dG~Is~~El~  121 (179)
T 3a8r_A           74 IVKQVLTKDELKDFY-EQLTD--QGFDNRLRTFFDMVDKNADGRLTAEEVK  121 (179)
T ss_dssp             CCSSEECHHHHHHHH-HHHHC--CCHHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             CCCCCcCHHHHHHHH-HHHcC--CCHHHHHHHHHHHHCCCCCCcCCHHHHH
Confidence            345667777665432 22221  2344567788999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	388
d1lnqa2	80	f.14.1.1 (A:19-98) Potassium channel-related prote	3e-15
d1lnqa2	80	f.14.1.1 (A:19-98) Potassium channel-related prote	1e-13
d1r3jc_	103	f.14.1.1 (C:) Potassium channel protein {Streptomy	3e-12
d1r3jc_	103	f.14.1.1 (C:) Potassium channel protein {Streptomy	2e-09
d1p7ba2	116	f.14.1.1 (A:36-151) Inward rectifier potassium cha	2e-09
d1p7ba2	116	f.14.1.1 (A:36-151) Inward rectifier potassium cha	1e-05
d1xl4a2	116	f.14.1.1 (A:23-138) Inward rectifier potassium cha	3e-09
d1xl4a2	116	f.14.1.1 (A:23-138) Inward rectifier potassium cha	3e-07
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	0.002

>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Length = 80

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

 Score = 67.8 bits (166), Expect = 3e-15
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 106 FVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFA 165
            +L+   +  G   + F       +E      +LY+  VT+ T+GYGD +P TP    F 
Sbjct: 6   LLLVLAVIIYGTAGFHF-------IEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFT 58

Query: 166 CLFVLVGFGFIDILLSGVVNYV 187
              +++G G   + +  ++ ++
Sbjct: 59  VTLIVLGIGTFAVAVERLLEFL 80

>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Length = 80

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

 Score = 63.6 bits (155), Expect = 1e-13
 Identities = 22/74 (29%), Positives = 33/74 (44%)

Query: 232 LGVVVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFS 291
           L +V+  I  G     F+E   W  S Y + +++ TVGYGD +  T  G +F    ++  
Sbjct: 6   LLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLG 65

Query: 292 TLMVARAFLYLAEA 305
               A A   L E 
Sbjct: 66  IGTFAVAVERLLEF 79

>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Length = 103

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 60.3 bits (146), Expect = 3e-12
 Identities = 20/89 (22%), Positives = 40/89 (44%)

Query: 105 AFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVF 164
           A VLL I L  G  +         G +      AL++ + T  T+GYGD+ P+T   +  
Sbjct: 11  ATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCV 70

Query: 165 ACLFVLVGFGFIDILLSGVVNYVLDLQEN 193
           A + ++ G     ++ + +  + +  ++ 
Sbjct: 71  AVVVMVAGITSFGLVTAALATWFVGREQE 99

>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Length = 103

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 52.6 bits (126), Expect = 2e-09
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 228 VGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPG 280
            G A  ++V+ +  G+ +    E        + +  + + SV + TTVGYGD    TL G
Sbjct: 8   AGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWG 67

Query: 281 RFFAAIWLLFSTLMVARAFLYLAEARIDKRHRR 313
           R  A + ++            LA   + +   R
Sbjct: 68  RCVAVVVMVAGITSFGLVTAALATWFVGREQER 100

>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Length = 116

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel Kirbac1.1
species: Burkholderia pseudomallei [TaxId: 28450]

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 19/85 (22%), Positives = 31/85 (36%)

Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
                  L  +   +  ++Y       +       V A +F + T+ T+GYGD+ P T  
Sbjct: 28  FFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVY 87

Query: 161 TKVFACLFVLVGFGFIDILLSGVVN 185
               A L + VG   I +    V  
Sbjct: 88  AHAIATLEIFVGMSGIALSTGLVFA 112

>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Length = 116

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel Kirbac1.1
species: Burkholderia pseudomallei [TaxId: 28450]

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILF-------FLEDLDWLDSFYLSVMSVTTVGYGDR 273
           ++   +       + V+   + AL+               ++ +F+ SV ++ TVGYGD 
Sbjct: 22  KVSWPVFFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDM 81

Query: 274 AFKTLPGRFFAAIWLLFSTLMVA 296
             +T+     A + +      +A
Sbjct: 82  HPQTVYAHAIATLEIFVGMSGIA 104

>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Length = 116

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel kirbac3.1
species: Magnetospirillum magnetotacticum [TaxId: 188]

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 20/85 (23%), Positives = 30/85 (35%)

Query: 101 IIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPA 160
            I     L  +   +  + Y    D           DA +F + TM TIGYG + P+ P 
Sbjct: 27  FITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPL 86

Query: 161 TKVFACLFVLVGFGFIDILLSGVVN 185
                 L  L G   + +  S +  
Sbjct: 87  ANTLVTLEALCGMLGLAVAASLIYA 111

>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Length = 116

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel kirbac3.1
species: Magnetospirillum magnetotacticum [TaxId: 188]

 Score = 46.5 bits (110), Expect = 3e-07
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 221 RMRIRLKVGLALGVVVLCIAIGALILFFLEDL-------DWLDSFYLSVMSVTTVGYGDR 273
            +   + + L  G+ ++  A+ AL      D+        + D+F+ SV ++ T+GYG  
Sbjct: 21  TVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKL 80

Query: 274 AFKTLPGRFFAAIWLLFSTLMVA 296
                       +  L   L +A
Sbjct: 81  IPIGPLANTLVTLEALCGMLGLA 103

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 34.5 bits (79), Expect = 0.002
 Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 7/66 (10%)

Query: 324 TIDDLLAA----DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKIT 379
           + +++L A    D +++G I+  +      KE+G+       ++       D N+  +I 
Sbjct: 7   SREEILKAFRLFDDDNSGTITIKDLRRV-AKELGE--NLTEEELQEMIAEADRNDDNEID 63

Query: 380 LPDLLE 385
             + + 
Sbjct: 64  EDEFIR 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1r3jc_	103	Potassium channel protein {Streptomyces coelicolor	99.73
d1r3jc_	103	Potassium channel protein {Streptomyces coelicolor	99.67
d1lnqa2	80	Potassium channel-related protein MthK {Archaeon M	99.58
d1p7ba2	116	Inward rectifier potassium channel Kirbac1.1 {Burk	99.46
d1lnqa2	80	Potassium channel-related protein MthK {Archaeon M	99.44
d1xl4a2	116	Inward rectifier potassium channel kirbac3.1 {Magn	99.44
d1xl4a2	116	Inward rectifier potassium channel kirbac3.1 {Magn	99.42
d1p7ba2	116	Inward rectifier potassium channel Kirbac1.1 {Burk	99.42
d2h8pc1	57	Potassium channel protein {Streptomyces coelicolor	98.61
d2h8pc1	57	Potassium channel protein {Streptomyces coelicolor	98.37
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	95.96
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	95.78
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	95.44
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	95.33
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	95.01
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	94.94
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	94.86
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	94.6
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	94.38
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	94.3
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	94.02
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	93.93
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	93.89
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	93.85
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	93.69
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	93.4
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	93.34
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	93.29
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	93.02
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	92.84
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	92.81
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	92.13
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	91.89
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	91.73
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	91.7
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	91.69
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	91.62
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	91.59
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	91.53
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	91.52
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	91.4
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	91.25
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	91.18
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	91.16
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	91.14
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	90.89
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	90.35
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	90.32
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	90.31
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	90.28
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	90.26
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	90.17
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	90.02
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	90.01
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	89.98
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	89.52
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	89.5
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	89.35
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	89.08
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	88.9
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	88.77
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	88.75
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	88.51
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	88.48
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	88.3
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	88.16
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	87.89
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	87.89
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	87.68
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	87.58
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	87.56
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	87.33
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	87.06
d2b59b1	60	Cellulosomal scaffolding protein A {Clostridium th	86.61
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	86.4
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	86.33
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	86.21
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	86.08
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	86.03
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	85.83
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	85.49
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	85.43
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	85.37
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	85.3
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	85.05
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	84.64
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	84.6
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	84.38
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	84.11
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	83.96
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	83.89
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	83.87
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	83.7
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	83.3
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	83.0
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	82.81
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	82.76
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	82.69
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	82.67
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	82.66
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	82.23
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	82.17
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	82.13
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	81.91
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	81.86
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	81.82
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	81.76
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	81.42
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	81.22
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	80.82
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	80.72
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	80.71
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	80.6
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	80.23

>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.73  E-value=1.6e-18  Score=138.59  Aligned_cols=89  Identities=25%  Similarity=0.312  Sum_probs=77.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHH
Q 016527          225 RLKVGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVAR  297 (388)
Q Consensus       225 ~~~~~~~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~  297 (388)
                      ++.+..++.++++++++++.+++..|+       .++.||+||+++|+|||||||++|.|..||+++++++++|+++++.
T Consensus         5 ~r~~~~~~~~~~~~~~~~s~~~~~~e~~~~~~~~~s~~~aly~~~vT~tTvGYGDi~P~t~~gr~~~~~~~~~Gi~~~~~   84 (103)
T d1r3jc_           5 WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSFGL   84 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCchhhhhhhheeeecccccCccccCChhHHHHHHHHHHHHHHHHHH
Confidence            445556666667777888888888886       3789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 016527          298 AFLYLAEARIDKRHRR  313 (388)
Q Consensus       298 ~~~~l~~~~~~~~~~~  313 (388)
                      .++.+++.+.++++++
T Consensus        85 ~~~~i~~~~~~~~~~r  100 (103)
T d1r3jc_          85 VTAALATWFVGREQER  100 (103)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999888766543

>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.67  E-value=3.4e-17  Score=130.68  Aligned_cols=94  Identities=21%  Similarity=0.363  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      +.+....+++++.+++++.+++..++..++.+..++.||+||+++|+|||||||++|.|+.||++++++++.|+.++++.
T Consensus         6 r~~~~~~~~~~~~~~~~s~~~~~~e~~~~~~~~~s~~~aly~~~vT~tTvGYGDi~P~t~~gr~~~~~~~~~Gi~~~~~~   85 (103)
T d1r3jc_           6 RAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSFGLV   85 (103)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCchhhhhhhheeeecccccCccccCChhHHHHHHHHHHHHHHHHHHH
Confidence            33334444444445555555555444444556678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 016527          180 LSGVVNYVLDLQEN  193 (388)
Q Consensus       180 ~~~~~~~~~~~~~~  193 (388)
                      ++.+.+.+.+.+++
T Consensus        86 ~~~i~~~~~~~~~~   99 (103)
T d1r3jc_          86 TAALATWFVGREQE   99 (103)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999988776543

>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=99.58  E-value=4.3e-18  Score=129.62  Aligned_cols=70  Identities=30%  Similarity=0.470  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHH
Q 016527          235 VVLCIAIGALILFFLEDLDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAE  304 (388)
Q Consensus       235 ~~~~i~~g~~~~~~~e~~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~  304 (388)
                      ++.++++|+..++..|+|++.||+||+++|+|||||||++|.|..||+++++++++|+.+++++++.+++
T Consensus         9 ~~~~~~~g~~~~~~~e~~s~~dalyf~~~T~tTiGyGD~~P~t~~~r~~~~~~~l~g~~~~~~~i~~i~~   78 (80)
T d1lnqa2           9 VLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLE   78 (80)
T ss_dssp             TTTSHHHHTTTTTTSSSCCSSTTHHHHHHHHTTCCCSSCCCCCSSHHHHHTHHHHTTSTTTTTHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHHHHhhheeeccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456778999999999999999999999999999999999999999999999999999999999888764

>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel Kirbac1.1
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=99.46  E-value=3.2e-14  Score=115.54  Aligned_cols=88  Identities=22%  Similarity=0.343  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHH
Q 016527          100 FIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDIL  179 (388)
Q Consensus       100 ~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~  179 (388)
                      ..+..+....++...+.+.+|..+++...+.+.++|.+|+||+++|+|||||||++|.++.||+++++.++.|+.++++.
T Consensus        27 ~~l~~~~~~~~~~~~~fa~~y~~~~~~~~~~~~~~~~~a~yfs~~T~tTvGYGDi~P~t~~~~~~~~~~~~~g~~~~a~~  106 (116)
T d1p7ba2          27 VFFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAIATLEIFVGMSGIALS  106 (116)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSSSSCCCCSSSSSTHHHHHHHTTTTTTCCCSCCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence            33333444444445556677777777667778899999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHHH
Q 016527          180 LSGVVNYV  187 (388)
Q Consensus       180 ~~~~~~~~  187 (388)
                      ++.+.+.+
T Consensus       107 ~g~i~~~~  114 (116)
T d1p7ba2         107 TGLVFARF  114 (116)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88776554

>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=99.44  E-value=9.4e-16  Score=116.45  Aligned_cols=70  Identities=26%  Similarity=0.567  Sum_probs=61.1

Q ss_pred             HHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHH
Q 016527          109 LSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVN  185 (388)
Q Consensus       109 ~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~  185 (388)
                      ++.++++|+..|..       .|+|++.||+||+++|+||+||||++|.|+.||++++++++.|+++++++++.+.+
T Consensus         9 ~~~~~~~g~~~~~~-------~e~~s~~dalyf~~~T~tTiGyGD~~P~t~~~r~~~~~~~l~g~~~~~~~i~~i~~   78 (80)
T d1lnqa2           9 VLAVIIYGTAGFHF-------IEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLE   78 (80)
T ss_dssp             TTTSHHHHTTTTTT-------SSSCCSSTTHHHHHHHHTTCCCSSCCCCCSSHHHHHTHHHHTTSTTTTTHHHHHTT
T ss_pred             HHHHHHHHHHHHHH-------HhCCCHHHHHHHHhhheeeccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556677777765       36799999999999999999999999999999999999999999999998887654

>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel kirbac3.1
species: Magnetospirillum magnetotacticum [TaxId: 188]

Probab=99.44  E-value=2.3e-14  Score=116.35  Aligned_cols=71  Identities=23%  Similarity=0.228  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 016527          235 VVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEA  305 (388)
Q Consensus       235 ~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~  305 (388)
                      .+..++..+++++..++       ++|.||+||+++|+|||||||++|.+..||+++++++++|+++++..++.+...
T Consensus        35 ~~~~~~~fa~~y~~~~~~~~~~~~~~~~~a~yfs~~T~tTvGYGDi~P~t~~~r~~~~~~~~~G~~~~a~~~g~i~~~  112 (116)
T d1xl4a2          35 YLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCGMLGLAVAASLIYAR  112 (116)
T ss_dssp             HHHHHHHHHHHHHHTCSCSTTSCTTCHHHHHHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHccCCCCccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444455555554432       589999999999999999999999999999999999999999999998877643

>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel kirbac3.1
species: Magnetospirillum magnetotacticum [TaxId: 188]

Probab=99.42  E-value=5.4e-14  Score=114.15  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=65.6

Q ss_pred             HHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccccccccCCcccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 016527          109 LSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACLFVLVGFGFIDILLSGVVNYV  187 (388)
Q Consensus       109 ~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGYGdi~p~t~~gr~~~~~~~l~Gi~~~~~~~~~~~~~~  187 (388)
                      .++..++.+++|....+...+.+.++|.+|+||+++|+|||||||++|.++.||+++++.++.|+.++++.++.+...+
T Consensus        35 ~~~~~~~fa~~y~~~~~~~~~~~~~~~~~a~yfs~~T~tTvGYGDi~P~t~~~r~~~~~~~~~G~~~~a~~~g~i~~~f  113 (116)
T d1xl4a2          35 YLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCGMLGLAVAASLIYARF  113 (116)
T ss_dssp             HHHHHHHHHHHHHHTCSCSTTSCTTCHHHHHHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHccCCCCccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344444556666666666667788999999999999999999999999999999999999999999999888776544

>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Inward rectifier potassium channel Kirbac1.1
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=99.42  E-value=1.9e-14  Score=116.88  Aligned_cols=70  Identities=21%  Similarity=0.271  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHhhc-------CCcccceeeeEeeeeccccCCCccCCcCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 016527          236 VLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGYGDRAFKTLPGRFFAAIWLLFSTLMVARAFLYLAEA  305 (388)
Q Consensus       236 ~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGyGDi~p~t~~gr~~~~~~~l~G~~~~~~~~~~l~~~  305 (388)
                      ++..++++.+++..++       ++|.||+||+++|+|||||||++|.+..||+++++.+++|+++++..++.+.+.
T Consensus        37 ~~~~~~fa~~y~~~~~~~~~~~~~~~~~a~yfs~~T~tTvGYGDi~P~t~~~~~~~~~~~~~g~~~~a~~~g~i~~~  113 (116)
T d1p7ba2          37 VVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAIATLEIFVGMSGIALSTGLVFAR  113 (116)
T ss_dssp             HHHHHHHHTTTSSSSSCCCCSSSSSTHHHHHHHTTTTTTCCCSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344455555544332       589999999999999999999999999999999999999999999988877643

>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.61  E-value=4e-09  Score=73.16  Aligned_cols=46  Identities=22%  Similarity=0.418  Sum_probs=37.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCcccceeeeEeeeecccc
Q 016527          225 RLKVGLALGVVVLCIAIGALILFFLED-------LDWLDSFYLSVMSVTTVGY  270 (388)
Q Consensus       225 ~~~~~~~~~~~~~~i~~g~~~~~~~e~-------~s~~da~y~~~iT~tTVGy  270 (388)
                      ++.+..+++++++.+++++.+++..|+       -|++||+||+++|+|||||
T Consensus         5 ~R~~~~~~~~~~i~i~~~s~~~y~~E~~~~~~~f~sip~a~WWaivT~TTVGY   57 (57)
T d2h8pc1           5 WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVGY   57 (57)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccchhhhhheeeeecccC
Confidence            345666666777777788888888885       3889999999999999998

>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}

class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel protein
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.37  E-value=9.3e-08  Score=66.09  Aligned_cols=52  Identities=17%  Similarity=0.190  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcchhhhheeeeeecccc
Q 016527           99 SFIIRQAFVLLSIYLFVGVVIYSFNTDHFSGVETHPVVDALYFCIVTMCTIGY  151 (388)
Q Consensus        99 ~~~~~~~~i~~~~~i~~g~~i~~~~~~~~~~~~~~s~~~a~yf~~vtltTVGY  151 (388)
                      +.+....++++++.++.+.++|..|++. ++....+..+|+||+++|+|||||
T Consensus         6 R~~~~~~~~~~i~i~~~s~~~y~~E~~~-~~~~f~sip~a~WWaivT~TTVGY   57 (57)
T d2h8pc1           6 RAAGAATVLLVIVLLAGSYLAVLAERGA-PGAQLITYPRALWWACETATTVGY   57 (57)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTCCCCSHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCccccccchhhhhheeeeecccC
Confidence            3555566666667677788888887654 334567899999999999999998

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=95.96  E-value=0.0032  Score=45.72  Aligned_cols=53  Identities=25%  Similarity=0.370  Sum_probs=42.7

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|. ...|..+|..+++++.+   -|++.|.|++|.|+.++.+
T Consensus        12 F~~~D~d~~G~I~~~El-~~~l~~lg~~~~~ei~~---~~~~~D~d~~G~I~~~EF~   64 (81)
T d2opoa1          12 FKRFDTNGDGKISSSEL-GDALKTLGSVTPDEVRR---MMAEIDTDGDGFISFDEFT   64 (81)
T ss_dssp             HHHHCTTCSSEEEHHHH-HHHHHTTTTCCHHHHHH---HHHHHCTTCSSEECHHHHH
T ss_pred             HHHHCCCCCCCCcHHHH-HHHHHHhhcCCHHHHHH---HHHHhCCCCCCeEeHHHHH
Confidence            35578999999998885 45778889888887765   4677799999999998754

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.78  E-value=0.0064  Score=42.27  Aligned_cols=54  Identities=19%  Similarity=0.287  Sum_probs=40.3

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+. ..++.+ ..++++++.++   |+..|.|++|.|+.++..
T Consensus         6 ~F~~~D~d~~G~I~~~El~-~~l~~lg~~~~~~~i~~~---~~~~D~d~dg~I~~~EF~   60 (67)
T d1tiza_           6 VFEKFDKNKDGKLSLDEFR-EVALAFSPYFTQEDIVKF---FEEIDVDGNGELNADEFT   60 (67)
T ss_dssp             HHHHHCTTSSSCEEHHHHH-HHHHHTCTTSCHHHHHHH---HHHHCCSSSSEECHHHHH
T ss_pred             HHHHHCCCCcCcCcHHHHH-HHHHHhccccchHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            3456789999999998864 455555 45666666544   666699999999998864

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.44  E-value=0.0098  Score=40.49  Aligned_cols=54  Identities=13%  Similarity=0.370  Sum_probs=42.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|.. ..|... ...+++++..+   |+..|.|++|.|+-+|.+
T Consensus         6 aF~~fD~~~~G~I~~~el~-~~l~~~g~~~~~~ei~~l---~~~~D~d~dg~I~~~eFl   60 (61)
T d2fcea1           6 AFQVFDKESTGKVSVGDLR-YMLTGLGEKLTDAEVDEL---LKGVEVDSNGEIDYKKFI   60 (61)
T ss_dssp             HHHHHCTTCCSCEEHHHHH-HHHHHTTCCCCHHHHHHH---HTTCCCCTTSEECHHHHH
T ss_pred             HHHHHCCCCCCeEeHHHHH-HHHHHcCCCCCHHHHHHH---HHHcCCCCCCcEeHHHhc
Confidence            4567889999999988864 455555 55778887765   667899999999998865

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.33  E-value=0.0045  Score=44.30  Aligned_cols=31  Identities=26%  Similarity=0.482  Sum_probs=28.2

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++++.++.+.|+..|.|++|.|++.||.
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~el~   33 (77)
T d1f54a_           3 NLTEEQIAEFKEAFALFDKDNNGSISSSELA   33 (77)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTCSSEEEHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeEChHHHH
Confidence            5789999999999999999999999999874

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.039  Score=39.55  Aligned_cols=56  Identities=18%  Similarity=0.387  Sum_probs=44.2

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +.+...|.+++|.++..|+....-.-...++++++..+   |..+|.|++|.|+-.|.+
T Consensus        24 ~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l---~~~~d~~~~g~I~y~eFl   79 (83)
T d1wlza1          24 QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRL---WNEMPVNAKGRLKYPDFL   79 (83)
T ss_dssp             HHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHH---HTTSCBCTTSCBCHHHHH
T ss_pred             HHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHH---hhccccCCCCcEeHHHHH
Confidence            35567899999999999976544444468899998766   677788999999988865

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=94.94  E-value=0.0073  Score=42.73  Aligned_cols=30  Identities=27%  Similarity=0.422  Sum_probs=27.6

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++++++.++.+.|+..|.|++|.|+..|+.
T Consensus         2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~   31 (73)
T d2pq3a1           2 LTEEQIAEFKEAFSLFDKDGDGTITTKELG   31 (73)
T ss_dssp             CCHHHHHHHHHHHHHTCTTSSSEEEGGGHH
T ss_pred             cCHHHHHHHHHHHHHHcCCCCceEeHHHHH
Confidence            588999999999999999999999999874

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=94.86  E-value=0.0072  Score=48.13  Aligned_cols=63  Identities=13%  Similarity=0.189  Sum_probs=27.5

Q ss_pred             hccchhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          321 REITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       321 ~~~t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      ...+..++..++.+.+|.++-.+|+...-.....-......++.+.|+..|.+++|.|+.+||
T Consensus        36 ~~~t~~ei~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el   98 (140)
T d1ggwa_          36 QNPTLAEITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGEL   98 (140)
T ss_dssp             CCCCHHHHHHHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHH
T ss_pred             hhhHHHhhhhhhccccccccchhhhhhhhhhhhcchhhHHHHHHHHHHHHhccCCCcchHHHH
Confidence            344444444444455555554444332221222222222333444555555555555555554

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=94.60  E-value=0.0088  Score=35.71  Aligned_cols=23  Identities=26%  Similarity=0.436  Sum_probs=20.3

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+.|+..|.|++|.|+.+||-
T Consensus         4 el~eAF~~FDkDg~G~Is~~EL~   26 (33)
T d2hf5a1           4 EIREAFRVFDKDGNGYISAAELR   26 (33)
T ss_dssp             HHHHHHHHHSSSCCSCBCHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHH
Confidence            56688999999999999999984

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=94.38  E-value=0.031  Score=44.26  Aligned_cols=64  Identities=16%  Similarity=0.181  Sum_probs=45.4

Q ss_pred             hhhccchhhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          319 LQREITIDDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       319 ~~~~~t~~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++..++..++..+..+.+|.++-.+|+......+...+.+  .++.+.|+..|.|++|.|+.+|+.
T Consensus        36 lg~~~~~~el~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~--~~l~~aF~~~D~d~~G~I~~~el~   99 (142)
T d1wdcb_          36 LGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSE--ETIRNAFAMFDEQETKKLNIEYIK   99 (142)
T ss_dssp             HSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCH--HHHHHHHHTTCTTCCSCEEHHHHH
T ss_pred             hhcCCCHHHHHHHHHhccCccccccccccccccccccchh--hhHHHhhhhhcccCCCcccHHHHH
Confidence            3456676777777777788888888876665555444332  345677888899999999988873

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=94.30  E-value=0.032  Score=39.48  Aligned_cols=54  Identities=17%  Similarity=0.287  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|. ...|..+ ..++++++.++   |++.|.|++|.|+.++..
T Consensus        14 ~F~~~D~d~~G~I~~~el-~~~l~~~g~~~~~~e~~~~---~~~~D~d~~G~I~~~EF~   68 (77)
T d1oqpa_          14 AFRLFDDDNSGTITIKDL-RRVAKELGENLTEEELQEM---IAEADRNDDNEIDEDEFI   68 (77)
T ss_dssp             HHHHHCTTCSSSEEHHHH-HHHHHHHTCCCCHHHHHHH---HHHHCCSSSSEECHHHHH
T ss_pred             HHHHHcCCCCCEechHHH-HHHHHHhCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            345678999999998885 4556555 45677777755   567899999999998853

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=94.02  E-value=0.014  Score=42.07  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=26.5

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++++++.++.+.|+..|.|++|.|+..||.
T Consensus         7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~   37 (81)
T d1avsa_           7 FLSEEMIAEFKAAFDMFDADGGGDISTKELG   37 (81)
T ss_dssp             HBCHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEchhHHH
Confidence            3688888888899999999999999988874

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=93.93  E-value=0.025  Score=40.65  Aligned_cols=53  Identities=30%  Similarity=0.461  Sum_probs=39.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|.. ..+... ...+++++..+   |.+.|.|++|+|+.+|.+
T Consensus        21 F~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~ev~~~---~~~~D~d~dg~I~~~EF~   74 (81)
T d1fi5a_          21 FRMFDKNADGYIDLEELK-IMLQATGETITEDDIEEL---MKDGDKNNDGRIDYDEFL   74 (81)
T ss_dssp             HHHHCSSCSSEECHHHHH-HHHHTSSSCCCHHHHHHH---HHHHCSSSSSSEEHHHHH
T ss_pred             HHHHcCCCCCcccHHHHH-HHHHhcCCCCCHHHHHHH---HHHHCCCCCCcEeHHHHH
Confidence            456789999999988854 445555 45677777765   556699999999998854

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=93.89  E-value=0.036  Score=38.86  Aligned_cols=54  Identities=22%  Similarity=0.445  Sum_probs=40.4

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..+. ...+...| .++++++.++.   ...|.|++|.|+.+|-+
T Consensus        13 ~F~~~D~d~~G~I~~~el-~~~l~~~g~~~s~~~~~~~~---~~~D~d~~g~I~f~eF~   67 (73)
T d2pq3a1          13 AFSLFDKDGDGTITTKEL-GTVMRSLGQNPTEAELQDMI---NEVDADGNGTIDFPEFL   67 (73)
T ss_dssp             HHHHTCTTSSSEEEGGGH-HHHHHHTTCCCCHHHHHHHH---HHHCTTCSSEEEHHHHH
T ss_pred             HHHHHcCCCCceEeHHHH-HHHHHHhCCCCCHHHHHHHH---HHhCCCCCCeEeHHHHH
Confidence            356678999999998884 45555555 46777776555   55599999999998754

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=93.85  E-value=0.014  Score=42.12  Aligned_cols=29  Identities=34%  Similarity=0.458  Sum_probs=27.2

Q ss_pred             ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          356 GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       356 ~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      |++++.++.+-|+..|.|+||.|+..+|.
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~   29 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELG   29 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence            68999999999999999999999999984

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=93.69  E-value=0.035  Score=39.84  Aligned_cols=53  Identities=19%  Similarity=0.318  Sum_probs=39.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|. ...|... ...+++++.++   |.+.|.|++|.|+.++.+
T Consensus        20 F~~~D~d~~G~I~~~el-~~~l~~~g~~~s~~e~~~~---~~~~D~d~~g~I~~~eF~   73 (81)
T d1avsa_          20 FDMFDADGGGDISTKEL-GTVMRMLGQNPTKEELDAI---IEEVDEDGSGTIDFEEFL   73 (81)
T ss_dssp             HHHHCTTCSSEECHHHH-HHHHHHTTCCCCHHHHHHH---HHHHCTTCCSSEEHHHHH
T ss_pred             HHHHcCCCCCeEchhHH-HHHHHHcCCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            45678999999998885 4455555 55667776655   666799999999988753

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=93.40  E-value=0.041  Score=43.32  Aligned_cols=55  Identities=18%  Similarity=0.300  Sum_probs=40.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+....-.....++++++.++   |+..|.|++|.|+.+|.+
T Consensus        87 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i---~~~~D~d~dG~i~~~eF~  141 (146)
T d1exra_          87 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEM---IREADIDGDGHINYEEFV  141 (146)
T ss_dssp             HHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHH---HHHHCSSSSSSBCHHHHH
T ss_pred             HHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            3456788999999999865444344456677777766   556689999999998864

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=93.34  E-value=0.036  Score=45.73  Aligned_cols=53  Identities=21%  Similarity=0.345  Sum_probs=37.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+... +...| ..+++++..   -|+..|.|+||.|+.+|..
T Consensus       113 F~~~D~d~~G~is~~E~~~~-l~~~g~~~~~~~~~~---lf~~~D~d~dG~Is~~EF~  166 (189)
T d1qv0a_         113 FDIFDKDGSGTITLDEWKAY-GKISGISPSQEDCEA---TFRHCDLDNAGDLDVDEMT  166 (189)
T ss_dssp             HHHTC----CEECHHHHHHH-HHHHSSCCCHHHHHH---HHHHSCCCTTSCEEHHHHH
T ss_pred             HHHHccCCCCcccchhhHHH-HHhcCCCCCHHHHHH---HHHHhCCCCCCcEeHHHHH
Confidence            45678999999999886544 55555 578877654   4778899999999999875

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=93.29  E-value=0.043  Score=38.77  Aligned_cols=53  Identities=32%  Similarity=0.476  Sum_probs=39.9

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..+. ...|..+| ..+++++..+   |.+.|.|++|.|+.+|.+
T Consensus        15 F~~fD~~~~G~I~~~el-~~~l~~lg~~~~~~e~~~~---~~~~D~d~dg~I~~~EF~   68 (75)
T d1jc2a_          15 FRIFDKNADGFIDIEEL-GEILRATGEHVIEEDIEDL---MKDSDKNNDGRIDFDEFL   68 (75)
T ss_dssp             HHHHCCSTTSSEEHHHH-HHHHHHSSSCCCHHHHHHH---HHHHCSSSCSEECHHHHH
T ss_pred             HHHHcCCCcCeEcHHHH-HHHHHhcCCCccHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            45578899999998885 45555554 5667776655   567899999999998754

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.02  E-value=0.065  Score=36.55  Aligned_cols=54  Identities=19%  Similarity=0.466  Sum_probs=39.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..+. ...+..+| .++++++.++   |...|.|++|.|+-++..
T Consensus         8 aF~~fD~d~~G~I~~~el-~~~l~~lg~~~~~~e~~~l---~~~~D~d~~g~I~~~eF~   62 (65)
T d1fw4a_           8 AFRVFDKDGNGYISAAEL-RHVMTNLGEKLTDEEVDEM---IREADIDGDGQVNYEEFV   62 (65)
T ss_dssp             HHHHHCTTCSSEECHHHH-HHHHHHTTCCCCHHHHHHH---HHTTCTTCSSSEEHHHHH
T ss_pred             HHHHHcCCCCCcCCHHHH-HHHHHHhCCCCCHHHHHHH---HHHcCCCCCCcEeHHHHH
Confidence            345678999999998885 45566664 5666666654   666799999999988753

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.84  E-value=0.064  Score=37.82  Aligned_cols=54  Identities=24%  Similarity=0.423  Sum_probs=39.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|. ...|...| ..+++++.+   -+.+.|.|++|.|+.++-+
T Consensus        15 ~F~~~D~d~~G~I~~~el-~~~l~~~g~~~t~~e~~~---~~~~~D~~~~g~I~~~eF~   69 (77)
T d1f54a_          15 AFALFDKDNNGSISSSEL-ATVMRSLGLSPSEAEVND---LMNEIDVDGNHQIEFSEFL   69 (77)
T ss_dssp             HHHHTCTTCSSEEEHHHH-HHHHHHHTCCCCHHHHHH---HHHTTCCSSCCEEEHHHHH
T ss_pred             HHHHHcCCCCCeEChHHH-HHHHHHhCCCCCHHHHHH---HHHHhCCCCCCeEeHHHHH
Confidence            355678999999998885 44565555 456766654   5566799999999988753

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=92.81  E-value=0.055  Score=39.37  Aligned_cols=54  Identities=22%  Similarity=0.372  Sum_probs=41.4

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|. ...|...| +.+++++.++   |.+.|.|++|.|+.+|-+
T Consensus        28 ~F~~~D~d~~G~I~~~el-~~~l~~lg~~~s~~e~~~l---~~~~D~d~~g~I~~~EFl   82 (87)
T d1s6ja_          28 LFKMIDTDNSGTITFDEL-KDGLKRVGSELMESEIKDL---MDAADIDKSGTIDYGEFI   82 (87)
T ss_dssp             HHHHHCTTCSSCEEHHHH-HHHHHTTTSSCCHHHHHHH---HHHHCTTCSSEECHHHHT
T ss_pred             HHHHHcCCCCCcCcHHHH-HHHHHHcCCCCCHHHHHHH---HHHcCCCCCCeEeHHHHH
Confidence            456788999999998885 55566665 4777777654   677799999999998865

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.097  Score=38.60  Aligned_cols=52  Identities=21%  Similarity=0.376  Sum_probs=38.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      -+...|.|++|.++..|. ...+.+ -.++++++.++   ++..|.|+||.|+.++-
T Consensus        15 ~F~~~D~d~~G~is~~e~-~~~l~~-~~l~~~~l~~i---~~~~D~d~dG~l~~~EF   66 (95)
T d1c07a_          15 IFLKTDKDMDGFVSGLEV-REIFLK-TGLPSTLLAHI---WSLCDTKDCGKLSKDQF   66 (95)
T ss_dssp             HHHHHCTTCSSEECHHHH-HHHHHT-TTCCHHHHHHH---HHHHCTTCSSSEETTTH
T ss_pred             HHHHHCCCCCCCCcHHHH-HHHHHh-cCCCHHHHHHH---HHHhCCCCCCeEcHHHH
Confidence            345678999999998775 334444 44777776654   56679999999999874

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.079  Score=39.33  Aligned_cols=56  Identities=18%  Similarity=0.246  Sum_probs=37.8

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-------------CCChHHHH-HHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-------------KIGEKDIS-QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-------------~i~~e~i~-~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|... .+...+             ....+... .+.+-|++.|.|+||.||.++.+
T Consensus        22 F~~~D~DgdG~i~~~El~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~   91 (99)
T d1snla_          22 FILHDINSDGVLDEQELEA-LFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFL   91 (99)
T ss_dssp             HHHHCSSCCSEEEHHHHHH-HHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHH
T ss_pred             HHHHCCCCCCcCCHHHHHH-HHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHH
Confidence            4567999999999988543 333221             11123333 34556899999999999998864

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.73  E-value=0.082  Score=42.32  Aligned_cols=54  Identities=30%  Similarity=0.431  Sum_probs=39.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+.+|.++..|+. ..+.+. ...+++++..+   |+..|.|+||.|+.+|-+
T Consensus       101 aF~~~D~d~~G~Is~~e~~-~~l~~~~~~~~~~~~~~l---~~~~D~d~dG~Is~~EF~  155 (162)
T d1topa_         101 CFRIFDKNADGFIDIEELG-EILRATGEHVTEEDIEDL---MKDSDKNNDGRIDFDEFL  155 (162)
T ss_dssp             HHHHHCTTCSSCBCHHHHH-HHHHTTTCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHHHCCCCCCCCcHHHHH-HHHHhhCCCCCHHHHHHH---HHHhCCCCCCcEEHHHHH
Confidence            3567889999999998854 445555 45566665554   777789999999998754

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=91.70  E-value=0.04  Score=42.47  Aligned_cols=53  Identities=23%  Similarity=0.275  Sum_probs=23.1

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.+++|.++..|+...............-..+...|+..|.+++|.|+.+++
T Consensus        45 ~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~el   97 (134)
T d1jfja_          45 IDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV   97 (134)
T ss_dssp             HCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHH
T ss_pred             hhhcccccccccccccccccccccccccccccccccccccccccCCcccHHHH
Confidence            34455555555554432222222222333333444455555555555555444

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=91.69  E-value=0.014  Score=42.81  Aligned_cols=44  Identities=25%  Similarity=0.478  Sum_probs=35.0

Q ss_pred             CCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          336 NGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       336 ~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.++..+..     ...+++++++.++.+.|+..|.|++|.|+.+||.
T Consensus         3 ~g~id~~~~~-----ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~   46 (87)
T d1s6ja_           3 SGHIDDDDKH-----MAERLSEEEIGGLKELFKMIDTDNSGTITFDELK   46 (87)
T ss_dssp             SSSSSSHHHH-----SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHH
T ss_pred             CCccCchHHH-----HHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHH
Confidence            4566655532     2357889999999999999999999999999974

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=91.62  E-value=0.058  Score=40.89  Aligned_cols=54  Identities=17%  Similarity=0.349  Sum_probs=39.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc----CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG----KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g----~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+ ...+...+    +.+++++..+   |++.|.|++|.|+.++..
T Consensus        45 ~F~~~D~d~~G~I~~~el-~~~l~~l~~~~~~~~~~~~~~l---~~~~D~d~dG~I~~~EF~  102 (107)
T d2pvba_          45 AFYVIDQDKSGFIEEDEL-KLFLQNFSPSARALTDAETKAF---LADGDKDGDGMIGVDEFA  102 (107)
T ss_dssp             HHHHHCTTCSSSBCHHHH-HTGGGGTCTTSCCCCHHHHHHH---HHHHCTTCSSSBCHHHHH
T ss_pred             HHHhhccCCCCcCcHHHH-HHHHHHhhcccccCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            346679999999998884 34444442    4677777765   567799999999988754

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=91.59  E-value=0.1  Score=39.60  Aligned_cols=46  Identities=13%  Similarity=0.343  Sum_probs=30.9

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .+.+|.++-.||+..+  .....+++   .+.+.|+..|.|++|.|+.++|
T Consensus        18 ~d~dG~idf~EF~~~~--~~~~~~~~---~~~~~F~~~D~d~~G~I~~~El   63 (109)
T d1pvaa_          18 VKAEGSFNHKKFFALV--GLKAMSAN---DVKKVFKAIDADASGFIEEEEL   63 (109)
T ss_dssp             TCSTTCCCHHHHHHHH--TCTTSCHH---HHHHHHHHHCTTCSSSBCHHHH
T ss_pred             cCCCCCCcHHHHHHHH--HHccCCHH---HHHHHhhCccCCCcCeEcHHHH
Confidence            4677888888886432  11222333   3456788889999999998886

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=91.53  E-value=0.078  Score=42.81  Aligned_cols=53  Identities=28%  Similarity=0.456  Sum_probs=40.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|.+|.++..|+.. .+...+ ++++++..   .|+..|.|+||.|+.++..
T Consensus        99 ~F~~~D~d~dG~Is~~E~~~-~l~~~~-~~~~~~~~---~f~~~D~d~dG~Is~~Ef~  151 (174)
T d2scpa_          99 FFRAVDTNEDNNISRDEYGI-FFGMLG-LDKTMAPA---SFDAIDTNNDGLLSLEEFV  151 (174)
T ss_dssp             HHHHHCTTCSSSEEHHHHHH-HHHHTT-CCGGGHHH---HHHHHCTTCSSEECHHHHH
T ss_pred             HHHHHCCCccccCCHHHHHH-HHHHHh-hhhHHHHH---HHhhcCCCCCCcEeHHHHH
Confidence            45678999999999998643 445554 56777664   5788899999999999865

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=91.52  E-value=0.1  Score=42.60  Aligned_cols=54  Identities=20%  Similarity=0.305  Sum_probs=41.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcC-CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGK-IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~-i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..|...|. .+++++.   .-|+..|.|+||.|+.+|.+
T Consensus       110 ~F~~~D~d~~G~Is~~El~-~~l~~~g~~~~~~~~~---~lf~~~D~d~dG~Is~~EF~  164 (187)
T d1uhka1         110 LFDIVDKDQNGAITLDEWK-AYTKAAGIIQSSEDCE---ETFRVCDIDESGQLDVDEMT  164 (187)
T ss_dssp             HHHHHCTTCSSEECHHHHH-HHHHHHTSCCSHHHHH---HHHHHSCCCTTSCEEHHHHH
T ss_pred             HHHHHccCCCcccchHHHH-HHHHHhCCCccHHHHH---HHHHHhCCCCCCCEeHHHHH
Confidence            3456799999999998854 55555554 6777655   45677899999999999864

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=91.40  E-value=0.077  Score=40.32  Aligned_cols=53  Identities=26%  Similarity=0.470  Sum_probs=38.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh---c-CCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM---G-KIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~---g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      -+...|.|++|.++..|. ...+...   | .++++++.++.   ++.|.|+||.|+.++-
T Consensus        46 ~F~~~D~d~~G~I~~~El-~~~l~~l~~~g~~ls~~ev~~~~---~~~D~d~dG~I~~~EF  102 (109)
T d1pvaa_          46 VFKAIDADASGFIEEEEL-KFVLKSFAADGRDLTDAETKAFL---KAADKDGDGKIGIDEF  102 (109)
T ss_dssp             HHHHHCTTCSSSBCHHHH-HTGGGGTCTTCCCCCHHHHHHHH---HHHCTTCSSSBCHHHH
T ss_pred             HhhCccCCCcCeEcHHHH-HHHHHHhhhcCCCCCHHHHHHHH---HHHCCCCcCcEeHHHH
Confidence            356678999999998873 3444433   2 57888887765   4558999999998874

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=91.25  E-value=0.091  Score=39.90  Aligned_cols=53  Identities=21%  Similarity=0.336  Sum_probs=38.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|. ...|...    .+++++++.++   |++.|.|+||.|+.++-.
T Consensus        47 F~~~D~d~~G~I~~~El-~~~l~~l~~~g~~~~~~e~~~~---~~~~D~d~dG~I~~~EF~  103 (109)
T d5pala_          47 FEILDKDQSGFIEEEEL-KGVLKGFSAHGRDLNDTETKAL---LAAGDSDHDGKIGADEFA  103 (109)
T ss_dssp             HHHHCTTCSSEECHHHH-HTHHHHHCTTCCCCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HhhhcCCCCCeEcHHHH-HHHHHHhhhccCcCCHHHHHHH---HHHhCCCCCCCEeHHHHH
Confidence            45678999999998874 3334332    35788888766   456688999999988753

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=91.18  E-value=0.12  Score=39.07  Aligned_cols=54  Identities=22%  Similarity=0.334  Sum_probs=39.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc----CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG----KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g----~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..|...+    +.+++++..+   |++.|.|+||+|+.++-.
T Consensus        46 ~F~~~D~d~~G~I~~~El~-~~l~~l~~~~~~~~~~e~~~~---~~~~D~d~dG~i~~~EF~  103 (109)
T d1rwya_          46 VFHILDKDKSGFIEEDELG-SILKGFSSDARDLSAKETKTL---MAAGDKDGDGKIGVEEFS  103 (109)
T ss_dssp             HHHHHSTTCSSEECHHHHH-THHHHHCTTCCCCCHHHHHHH---HHHHCTTCSSSEEHHHHH
T ss_pred             HhhcccCCCCCcCcHHHHH-HHHHHhccccccCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            3566789999999988853 4444443    4678877765   555589999999988753

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=91.16  E-value=0.063  Score=38.61  Aligned_cols=45  Identities=16%  Similarity=0.408  Sum_probs=23.2

Q ss_pred             hhcC-CCCccchhHHHHHHHHHh-----cCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMN-HNGFISKSEYVIFKLKEM-----GKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d-~~~~~~~~e~~~~~L~~~-----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.+ .+|.++..|     |+..     -..+++++.++   +.+.|.|++|.|+.+|-
T Consensus        24 fD~d~~~G~I~~~e-----l~~~l~~lg~~~t~~el~~~---i~~~D~d~~G~I~f~eF   74 (82)
T d1wrka1          24 FVLGAEDGSISTKE-----LGKVMRMLGQNPTPEELQEM---IDEVDEDGSGTVDFDEF   74 (82)
T ss_dssp             HTTTCTTSSBCHHH-----HHHHHHHTTCCCCHHHHHHH---HHTTCTTCCSSBCHHHH
T ss_pred             HcCcCCCCeEeHHH-----HHHHHHHcCCCCCHHHHHHH---HHHhCCCCCCeEeHHHH
Confidence            3445 356666443     3443     23445554444   34456667777766653

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=91.14  E-value=0.18  Score=36.07  Aligned_cols=32  Identities=16%  Similarity=0.204  Sum_probs=28.8

Q ss_pred             cCCChHHHHHHHHHhhhcCCCC-CCccChhhhc
Q 016527          353 GKIGEKDISQICNQFNRLDPNN-CGKITLPDLL  384 (388)
Q Consensus       353 g~i~~e~i~~i~~~F~~ld~~~-~g~l~~~d~~  384 (388)
                      .+++++++.++.+.|+..|.|+ +|.|+..||.
T Consensus         7 ~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~   39 (82)
T d1wrka1           7 EQLTEEQKNEFKAAFDIFVLGAEDGSISTKELG   39 (82)
T ss_dssp             HHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHH
T ss_pred             hhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHH
Confidence            3689999999999999999995 7999999985

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.89  E-value=0.13  Score=42.43  Aligned_cols=56  Identities=13%  Similarity=0.303  Sum_probs=41.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH------hcCCChHHHHHHHHH-hhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE------MGKIGEKDISQICNQ-FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~------~g~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.+++.|.. ..+..      ....++++++++.+. |++.|.|+||.||.+|-.
T Consensus       101 F~~~D~d~~G~I~~~el~-~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~  163 (180)
T d1xo5a_         101 FRIFDFDDDGTLNREDLS-RLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ  163 (180)
T ss_dssp             HHHHCTTCSSSBCHHHHH-HHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             hccccCCCCCeeeHHHHH-HHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            455689999999988743 33433      255778888876654 899999999999998853

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.35  E-value=0.11  Score=40.81  Aligned_cols=53  Identities=15%  Similarity=0.422  Sum_probs=41.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|. ...|...| +++++++..+   |...|.|++|.|+-+|.+
T Consensus        87 F~~~D~~~~G~I~~~el-~~~l~~~g~~l~~~ei~~l---~~~~D~d~dG~I~y~eF~  140 (146)
T d1m45a_          87 FQVFDKESTGKVSVGDL-RYMLTGLGEKLTDAEVDEL---LKGVEVDSNGEIDYKKFI  140 (146)
T ss_dssp             HHTTCSSSSSEEEHHHH-HHHHHHSTTCCCHHHHHHH---HTTCCCCTTSEEEHHHHH
T ss_pred             HHhhccccccccchhhh-hhhhcccCCcchHHHHHHH---HHHhCCCCCCcEEHHHHH
Confidence            56678899999998875 44555555 5788887765   667899999999998865

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=90.32  E-value=0.13  Score=42.94  Aligned_cols=44  Identities=20%  Similarity=0.381  Sum_probs=26.9

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .|.+.+|.++-.||....         +.+..+.+.|+..|.|+||.|+..+|
T Consensus        72 ~D~d~~G~i~~~EF~~l~---------~~~~~~~~~F~~~D~d~sG~i~~~El  115 (188)
T d1qxpa2          72 MDRDGNGKLGLVEFNILW---------NRIRNYLTIFRKFDLDKSGSMSAYEM  115 (188)
T ss_dssp             HCC--CCCCCSSSHHHHH---------HHHHHHHHHHGGGCTTCCSCCBHHHH
T ss_pred             hcCCCCCcccHHHHHHHH---------hhhHHHHHHHHHhCCCCCCEECHHHH
Confidence            466677777766664321         23455666677777777777777776

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.31  E-value=0.079  Score=38.84  Aligned_cols=31  Identities=26%  Similarity=0.312  Sum_probs=22.4

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++++++...+.+-|+.+|.|++|.|+.+++.
T Consensus         2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~   32 (92)
T d1fi6a_           2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAK   32 (92)
T ss_dssp             CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCCCcccchhHHHHH
Confidence            3567777777777777777777777777653

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.28  E-value=0.081  Score=30.57  Aligned_cols=24  Identities=33%  Similarity=0.509  Sum_probs=19.6

Q ss_pred             HHHHHhhhcCCCCCCccChhhhcc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~~  385 (388)
                      ++.+-|+-.|.|+||.|+++++.+
T Consensus         5 ELae~FRifDkNaDGyiD~eEl~~   28 (34)
T d1ctda_           5 ELANAFRIFDKNADGYIDIEELGE   28 (34)
T ss_dssp             HHHHHHHTTCCSSSSCBCHHHHHH
T ss_pred             HHHHHHHHHccCCcccccHHHHHH
Confidence            445678888999999999998754

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.26  E-value=0.17  Score=39.68  Aligned_cols=53  Identities=17%  Similarity=0.308  Sum_probs=39.6

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      .+...|.+++|.++..|+....-.....++++++.++.+.+   | |++|+|+.++.
T Consensus        88 aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~---d-d~dG~I~~~eF  140 (146)
T d1lkja_          88 AFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV---S-DGSGEINIQQF  140 (146)
T ss_dssp             HHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHH---C-CSSSEEEHHHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhc---c-CCCCeEeHHHH
Confidence            45668899999999998754444445667788877766555   6 89999998874

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=90.17  E-value=0.097  Score=41.11  Aligned_cols=53  Identities=21%  Similarity=0.338  Sum_probs=35.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.+++|.++..|+. ..|...| .++++++..+.+    .|.|++|.|+-++.+
T Consensus        86 aF~~~D~d~~G~I~~~el~-~~l~~~g~~~~~~e~~~l~~----~~~d~dG~I~y~eF~  139 (145)
T d2mysc_          86 GLRVFDKEGNGTVMGAELR-HVLATLGEKMTEEEVEELMK----GQEDSNGCINYEAFV  139 (145)
T ss_pred             HHHHhhcCCCCEEcHHHHH-HHHHHhCCCCCHHHHHHHHh----hcCCCCCeEEHHHHH
Confidence            3456677888888877753 4455544 677777777653    255788888877654

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=90.02  E-value=0.15  Score=38.41  Aligned_cols=47  Identities=15%  Similarity=0.246  Sum_probs=33.3

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+.+|.++-.||+... .    .+.+...++.+.|+..|.|++|.|+.+|+.
T Consensus        17 ~~~~gsi~~~eF~~~~-~----l~~~~~~~l~~~F~~~D~d~~G~I~~~el~   63 (107)
T d2pvba_          17 CSAADSFKHKEFFAKV-G----LASKSLDDVKKAFYVIDQDKSGFIEEDELK   63 (107)
T ss_dssp             TCSTTCCCHHHHHHHH-T----GGGSCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             ccCCCCcCHHHHHHHH-h----cccCCHHHHHHHHHhhccCCCCcCcHHHHH
Confidence            3456678877776432 1    233344467788999999999999999984

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.01  E-value=0.17  Score=41.16  Aligned_cols=46  Identities=15%  Similarity=0.273  Sum_probs=36.3

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|.++-.||....         +.+.++.+.|...|.|++|.|+.+|+.
T Consensus        48 ~~D~~~~G~i~~~EF~~l~---------~~~~~~~~~F~~fD~d~sG~I~~~El~   93 (165)
T d1k94a_          48 MLDRDHTGKMGFNAFKELW---------AALNAWKENFMTVDQDGSGTVEHHELR   93 (165)
T ss_dssp             HHCTTCSSCBCHHHHHHHH---------HHHHHHHHHHHHHCTTCCSBCCHHHHH
T ss_pred             HhCCCCCCcCcHHHHHHHh---------hccchhHHHHHHhCCCCCCeEcHHHHH
Confidence            3678889999999986432         235667788999999999999999874

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=89.98  E-value=0.063  Score=37.08  Aligned_cols=53  Identities=21%  Similarity=0.538  Sum_probs=39.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcC--CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGK--IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~--i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|. ...+...|.  ++++++..+   |+..|.|++|.|+.++-.
T Consensus         8 F~~~D~d~~G~I~~~el-~~~l~~~g~~~~s~~e~~~~---~~~~D~d~dG~i~~~EF~   62 (68)
T d1c7va_           8 FKVFDANGDGVIDFDEF-KFIMQKVGEEPLTDAEVEEA---MKEADEDGNGVIDIPEFM   62 (68)
T ss_dssp             HHHHSCSGGGEECHHHH-HHHSSTTTTCCCCHHHHHHH---HHHHCSSGGGSEEHHHHH
T ss_pred             HHHHcCCCcCeEcHHHH-HHHHHHhCCCCCCHHHHHHH---HHHhCCCCCCcEeHHHHH
Confidence            45578899999998874 445555543  688888866   456799999999988753

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.52  E-value=0.23  Score=40.55  Aligned_cols=57  Identities=26%  Similarity=0.427  Sum_probs=41.4

Q ss_pred             hhhhhcCCCCccchhHHHH---HHHHHhc-CCChHHHHHHHHH-hhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVI---FKLKEMG-KIGEKDISQICNQ-FNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~---~~L~~~g-~i~~e~i~~i~~~-F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|.+|.++..|...   ..+...+ ..+++.+.++.++ |.+.|.|+||.|+.+|..
T Consensus        97 F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~  158 (183)
T d2zfda1          97 FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWR  158 (183)
T ss_dssp             HHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHH
T ss_pred             hcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            3567899999999887433   2333334 4567777776655 999999999999998753

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=89.50  E-value=0.15  Score=40.69  Aligned_cols=52  Identities=29%  Similarity=0.553  Sum_probs=39.1

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..|+. ..+...| ++++++..+   |+..|.|++|.|+.++.+
T Consensus       108 F~~~D~d~dG~Is~~E~~-~~~~~~~-~~~~~~~~~---f~~~D~d~dG~i~~~Ef~  159 (176)
T d1nyaa_         108 VGMCDKNADGQINADEFA-AWLTALG-MSKAEAAEA---FNQVDTNGNGELSLDELL  159 (176)
T ss_dssp             HHHTCSSCCSEEEHHHHH-HHHHHTT-CCHHHHHHH---HHHHCTTCSSEEEHHHHH
T ss_pred             HHHHccCCChhhhHHHHH-HHHHhcC-CcHHHHHHH---HHHHCCCCCCcEeHHHHH
Confidence            455688999999999874 3344444 677776654   777799999999999875

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.35  E-value=0.087  Score=38.88  Aligned_cols=30  Identities=10%  Similarity=0.121  Sum_probs=27.4

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++++...+.+-|+.+|.|++|.|+.+++.
T Consensus         4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~   33 (95)
T d1c07a_           4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVR   33 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence            678899999999999999999999998874

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=89.08  E-value=0.13  Score=39.40  Aligned_cols=53  Identities=21%  Similarity=0.273  Sum_probs=38.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCC-ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKI-GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i-~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+. ..+...+.- ++++   +..-|...|.+++|.|+.++..
T Consensus         6 F~~~D~d~dG~is~~E~~-~~l~~~~~~~~~~~---~~~~~~~~D~~~~g~i~~~Ef~   59 (134)
T d1jfja_           6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQL---LQLIFKSIDADGNGEIDQNEFA   59 (134)
T ss_dssp             HHHHCTTCSSEEEHHHHH-HHHHTTCCSSHHHH---HHHHHHHHCSSCCSEEEHHHHH
T ss_pred             HHHHcCCCcCCCcHHHHH-HHHHHcCCCCCHHH---HHHHHHHhhhcccccccccccc
Confidence            456788999999999964 455555433 3444   4455777899999999998864

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.90  E-value=0.34  Score=35.78  Aligned_cols=52  Identities=12%  Similarity=0.152  Sum_probs=38.5

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      -+...|.+++|.++..|. ...+.. ..++++++.+|.+   ..|.|++|.|+.++.
T Consensus        16 ~F~~~D~d~~G~i~~~e~-~~~l~~-s~L~~~~L~~i~~---~~D~d~dG~L~~~EF   67 (99)
T d1qjta_          16 YYRQVEAGNTGRVLALDA-AAFLKK-SGLPDLILGKIWD---LADTDGKGVLSKQEF   67 (99)
T ss_dssp             HHHHHCCTTSSCCCSHHH-HHHHHT-SSSCHHHHHHHHH---HHCCSSSSSCCSHHH
T ss_pred             HHHHHCCCCCCcccHHHH-HHHHHH-cCCcHHHHHHHHH---HHcCCCCCccCHHHH
Confidence            456789999999988773 344444 4578887776554   459999999999875

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=88.77  E-value=0.23  Score=36.31  Aligned_cols=48  Identities=17%  Similarity=0.295  Sum_probs=31.1

Q ss_pred             hhcCCCCccchhHHHHHHHHH-----hcCCChHHHHHHHHHhhhcCCCCCCccChhh
Q 016527          331 ADMNHNGFISKSEYVIFKLKE-----MGKIGEKDISQICNQFNRLDPNNCGKITLPD  382 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~-----~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d  382 (388)
                      .|.| +|.+++.|+-...-..     ....+++.+.   +-|+++|.|+||.|+.++
T Consensus        18 yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~---~~~~~~D~n~DG~I~F~E   70 (92)
T d1a4pa_          18 FAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVD---KIMKDLDQCRDGKVGFQS   70 (92)
T ss_dssp             HHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHH---HHHHHHCTTSSSCBCHHH
T ss_pred             HcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHH---HHHHHHhCCCCCCCcHHH
Confidence            3444 7999988854433221     1223445554   447888999999999887

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.75  E-value=0.26  Score=37.95  Aligned_cols=54  Identities=17%  Similarity=0.305  Sum_probs=40.2

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.+.+|.++..++. ..+... ..++++++..+   |+..|.|++|.|+.+|-+
T Consensus        84 ~f~~~d~~~~G~i~~~el~-~~l~~~g~~l~~~e~~~l---~~~~D~d~dG~i~~~EF~  138 (141)
T d2obha1          84 AFKLFDDDETGKISFKNLK-RVAKELGENLTDEELQEM---IDEADRDGDGEVSEQEFL  138 (141)
T ss_dssp             HHHHHCTTCSSSBCHHHHH-HHHHHTTCCCCHHHHHHH---HHHHCTTSSSSBCHHHHH
T ss_pred             HHHHhcccCCCCccHHHHH-HHHHHhCCCCCHHHHHHH---HHHHCCCCCCCEeHHHHH
Confidence            4556788899999988864 455555 46888877655   566689999999988754

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.51  E-value=0.23  Score=36.19  Aligned_cols=51  Identities=22%  Similarity=0.236  Sum_probs=37.4

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +...|.|.+|.++..|. ...+.+.+ ++++++..|.+   ..|.|++|.|+.++-
T Consensus        15 F~~~D~d~~G~i~~~e~-~~~l~~~~-l~~~~l~~i~~---~~D~d~dG~l~~~EF   65 (92)
T d1fi6a_          15 FKTIQPDLNGFIPGSAA-KEFFTKSK-LPILELSHIWE---LSDFDKDGALTLDEF   65 (92)
T ss_dssp             HTTTCCSTTCEEEHHHH-HHHHHHHS-SCHHHHHHHHH---HHCTTCSSEEEHHHH
T ss_pred             HHHhCCCcccchhHHHH-HHHHHHcc-CCHHHHHHHHH---HhCCCCCCeecHHHH
Confidence            44568899999987664 44555554 77877766555   569999999998874

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.48  E-value=0.13  Score=38.89  Aligned_cols=53  Identities=17%  Similarity=0.375  Sum_probs=38.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|+ ...+...    .+++++++.++   |+..|.|+||.|+.++..
T Consensus        47 F~~~D~d~~G~I~~~El-~~~l~~l~~~~~~l~~~~~~~~---~~~~D~d~dG~I~~~EF~  103 (108)
T d1rroa_          47 FRFIDNDQSGYLDGDEL-KYFLQKFQSDARELTESETKSL---MDAADNDGDGKIGADEFQ  103 (108)
T ss_dssp             HHHHCTTCSSEECTHHH-HTGGGGTCTTSCCCCHHHHHHH---HHHHCCSSSSSEEHHHHH
T ss_pred             HhhhcCCCCCeEcHHHH-HHHHHHHHhccCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            45678999999998884 3333333    24677887766   455699999999988754

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=88.30  E-value=0.26  Score=38.32  Aligned_cols=54  Identities=20%  Similarity=0.362  Sum_probs=39.7

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...+.+.+|.++-.+++.........  ......+.+.|+..|.|++|.|+.+|+.
T Consensus        52 ~~~d~~~~g~i~~~ef~~~~~~~~~~--~~~~~~~~~~F~~~D~d~~G~i~~~e~~  105 (146)
T d1exra_          52 NEVDADGNGTIDFPEFLSLMARKMKE--QDSEEELIEAFKVFDRDGNGLISAAELR  105 (146)
T ss_dssp             HHHCTTCSSSEEHHHHHHHHHHHHHH--HHHHHHHHHHHHHHSTTCSSCBCHHHHH
T ss_pred             HhcCCCCCCcccHHHHHHHHHHHhhc--cChHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            45678889999988887654433332  2234566788999999999999999875

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.16  E-value=0.32  Score=37.95  Aligned_cols=51  Identities=22%  Similarity=0.328  Sum_probs=31.2

Q ss_pred             hcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       332 ~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +.+.++.++..++............  .-+.+.+.|+..|.+++|.|+.+|+.
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aF~~~D~d~~G~I~~~el~  106 (146)
T d1lkja_          56 DVDGNHQIEFSEFLALMSRQLKSND--SEQELLEAFKVFDKNGDGLISAAELK  106 (146)
T ss_dssp             CSSSCCEEEHHHHHHHHHHHTCCCC--HHHHHHHHHHHHCSSSSCEEEHHHHH
T ss_pred             ccCCcccccHHHHHHHHHHhhcccc--HHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3445555554554433222222222  22456778999999999999999874

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=87.89  E-value=0.16  Score=40.26  Aligned_cols=22  Identities=23%  Similarity=0.360  Sum_probs=13.1

Q ss_pred             HHHHHhhhcCCCCCCccChhhh
Q 016527          362 QICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      ++.+.|+..|.+++|.|+.+||
T Consensus        83 ~l~~aF~~~D~~~~G~I~~~el  104 (152)
T d1wdcc_          83 DYMEAFKTFDREGQGFISGAEL  104 (152)
T ss_dssp             HHHHHHHTTCSSSSSEEEHHHH
T ss_pred             hhhhhhhccccccCccchHHHH
Confidence            3445566666666666666655

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=87.89  E-value=0.25  Score=40.56  Aligned_cols=46  Identities=15%  Similarity=0.299  Sum_probs=24.7

Q ss_pred             hhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+.+|.++-.||....         +.+..+.+.|...|.|++|.|+.+||.
T Consensus        69 ~~D~d~~G~I~~~EF~~~~---------~~~~~~~~~F~~~D~d~sG~I~~~El~  114 (186)
T d1df0a1          69 MLDEDGSGKLGLKEFYILW---------TKIQKYQKIYREIDVDRSGTMNSYEMR  114 (186)
T ss_dssp             HHCCSSSSEECHHHHHHHH---------HHHHHHHHHHHHHCTTCCSCEEGGGHH
T ss_pred             HHcCCCCCcccHHHHHHHH---------HhHHHHHHHHHhhCCCCCCcccHHHHH
Confidence            3455666666666554321         223344555666666666666666553

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.68  E-value=0.29  Score=36.75  Aligned_cols=57  Identities=16%  Similarity=0.269  Sum_probs=36.2

Q ss_pred             cchhhhhhh--hcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          323 ITIDDLLAA--DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       323 ~t~~~l~~~--~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+++..+  +.+.+|.++..+|+.. +    ..+.+...++.+-|+..|.|++|.|+.+++.
T Consensus         6 ls~~dI~~~l~~~~~~~s~~~~~F~~~-~----~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~   64 (108)
T d1rroa_           6 LSAEDIAAALQECQDPDTFEPQKFFQT-S----GLSKMSASQVKDIFRFIDNDQSGYLDGDELK   64 (108)
T ss_dssp             SCHHHHHHHHHHTCSTTCCCHHHHHHH-H----SGGGSCHHHHHHHHHHHCTTCSSEECTHHHH
T ss_pred             CCHHHHHHHHHhcccCCCccHHHHHHH-H----ccCcCCHHHHHHHHhhhcCCCCCeEcHHHHH
Confidence            444444333  3345666776666421 1    1234445566688999999999999999974

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=87.58  E-value=0.17  Score=38.25  Aligned_cols=47  Identities=17%  Similarity=0.267  Sum_probs=33.5

Q ss_pred             cCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          333 MNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       333 ~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+.+|.++-.||+..+  ....-++   .++.+.|+..|.|++|.|+.++|.
T Consensus        18 ~~~~G~idf~eF~~~~--~~~~~~~---~~l~~~F~~~D~d~~G~I~~~El~   64 (109)
T d5pala_          18 FKDPGTFDYKRFFHLV--GLKGKTD---AQVKEVFEILDKDQSGFIEEEELK   64 (109)
T ss_dssp             TCSTTCCCHHHHHHHH--TCTTCCH---HHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             cCCCCcCcHHHHHHHH--HhcCCCH---HHHHHHHhhhcCCCCCeEcHHHHH
Confidence            3567889988886432  1122233   356788999999999999999973

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.56  E-value=0.23  Score=40.95  Aligned_cols=53  Identities=26%  Similarity=0.354  Sum_probs=38.8

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++..|++...-.-...-.++.+   ..-|+..|.|++|.|+.+|+.
T Consensus        70 ~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~---~~~F~~~D~d~dG~is~~E~~  122 (190)
T d1fpwa_          70 TVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL---SWAFELYDLNHDGYITFDEML  122 (190)
T ss_dssp             HTCCSSCSSEECHHHHHHHHHHHSCCCSTHHH---HHHHHHHCSSCSSEEEHHHHH
T ss_pred             HHhCcCCCCcccHHHHHHHHHHHccCchHHHH---HHHHHHhccCCCCcCcHHHHH
Confidence            45678889999999987654443333444444   466888899999999999874

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.33  E-value=0.12  Score=34.59  Aligned_cols=24  Identities=25%  Similarity=0.513  Sum_probs=21.1

Q ss_pred             HHHHHHhhhcCCCCCCccChhhhc
Q 016527          361 SQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       361 ~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +++.+.|+..|.+++|.|+..+|.
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~   24 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLR   24 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHH
Confidence            357789999999999999999874

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.06  E-value=0.21  Score=40.98  Aligned_cols=53  Identities=25%  Similarity=0.197  Sum_probs=39.0

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++-.||+........ .+.++  .+...|+..|.|++|.|+.+|+.
T Consensus        67 ~~~d~~~dg~I~~~EF~~~l~~~~~-~~~~e--~l~~~F~~~D~d~dG~i~~~El~  119 (187)
T d1g8ia_          67 NVFDENKDGRIEFSEFIQALSVTSR-GTLDE--KLRWAFKLYDLDNDGYITRNEML  119 (187)
T ss_dssp             HHHCTTCSSEEEHHHHHHHHHHHHH-CCHHH--HHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             HHhCcCCCCCCcHHHHHHHHHHhcc-Cchhh--hHHHHHHHHhcCCCCeEcHHHHH
Confidence            3457788999999998876554443 33333  34567999999999999999864

>d2b59b1 a.139.1.1 (B:104-163) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosomal scaffolding protein A
species: Clostridium thermocellum [TaxId: 1515]

Probab=86.61  E-value=0.27  Score=32.21  Aligned_cols=33  Identities=27%  Similarity=0.484  Sum_probs=29.0

Q ss_pred             hcCCChHHHHHHHHHh----------hhcCCCCCCccChhhhc
Q 016527          352 MGKIGEKDISQICNQF----------NRLDPNNCGKITLPDLL  384 (388)
Q Consensus       352 ~g~i~~e~i~~i~~~F----------~~ld~~~~g~l~~~d~~  384 (388)
                      .|.+.-+|+.++++-|          +++|.|+||-|+..|++
T Consensus         3 D~~INm~DVmei~k~F~~~~g~~~y~~~lDlN~dGaInm~Di~   45 (60)
T d2b59b1           3 DNSINLLDVAEVIRCFNATKGSANYVEELDINRNGAINMQDIM   45 (60)
T ss_dssp             SSCCCHHHHHHHHHTTTCBTTSTTCCGGGSTTCSSBCSHHHHH
T ss_pred             cccccHHHHHHHHHHhccccCCcchhhhccccccccccHHHHH
Confidence            4667788999999999          78999999999999985

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=86.40  E-value=0.52  Score=36.53  Aligned_cols=52  Identities=17%  Similarity=0.395  Sum_probs=40.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..+. ...|...| +++++++.++.+.+   |.+ +|.|+.++.+
T Consensus        82 F~~~D~d~~G~I~~~el-~~~l~~~g~~lt~~e~~~l~~~~---d~~-dG~I~y~eF~  134 (140)
T d1ggwa_          82 FQVFDKDATGMIGVGEL-RYVLTSLGEKLSNEEMDELLKGV---PVK-DGMVNYHDFV  134 (140)
T ss_dssp             HHTTCSSCSSCCCHHHH-HHHHHHHHSCSCHHHHHHHHHHT---TCS-SCCSTTTHHH
T ss_pred             HHHHhccCCCcchHHHH-HHHHHHcCCCCCHHHHHHHHHhh---CCC-CCEEeHHHHH
Confidence            45678899999998885 45666665 59999999887665   666 8999988754

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.33  E-value=0.41  Score=39.12  Aligned_cols=53  Identities=26%  Similarity=0.206  Sum_probs=38.2

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++-.|++...-.....-.++.+.   ..|+..|.|++|.|+.+++.
T Consensus        65 ~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~---~~F~~~D~d~~g~i~~~E~~  117 (189)
T d1jbaa_          65 RAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK---WTFKIYDKDRNGCIDRQELL  117 (189)
T ss_dssp             HHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHH---HHHHHHCSSCSSCBCHHHHH
T ss_pred             HHhccCCCCeEeehhHHHHHHhhcccchHHHHH---HHHhhhccCCCCcccHhHHH
Confidence            456889999999999876555444333344443   45788899999999998864

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.21  E-value=0.47  Score=38.75  Aligned_cols=53  Identities=11%  Similarity=0.056  Sum_probs=38.7

Q ss_pred             hhhcC-CCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMN-HNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d-~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..|.+ .+|.++-.||+...-.-..+.+.++  .+...|+..|.|++|.|+.+|+.
T Consensus        65 ~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~--kl~~~F~~~D~d~~G~I~~~el~  118 (180)
T d1xo5a_          65 VFSTSPAKDSLSFEDFLDLLSVFSDTATPDI--KSHYAFRIFDFDDDGTLNREDLS  118 (180)
T ss_dssp             HHCCSTTCCEECHHHHHHHHHHHSTTSCHHH--HHHHHHHHHCTTCSSSBCHHHHH
T ss_pred             hccCCCCCCcCcHHHHHHHHHHHhhcCCHHH--HHHHhhccccCCCCCeeeHHHHH
Confidence            34555 5899999999876545445555544  33456999999999999999985

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=86.08  E-value=0.33  Score=37.94  Aligned_cols=53  Identities=19%  Similarity=0.295  Sum_probs=37.3

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..++.. .|... .+++++++..+.+   ..|.|++|.|+-.|.+
T Consensus        83 F~~fD~~~~g~I~~~el~~-~l~~~g~~ls~~e~~~~~~---~~d~d~dg~I~y~eF~  136 (145)
T d2mysb_          83 FKVLDPDGKGSIKKSFLEE-LLTTGGGRFTPEEIKNMWA---AFPPDVAGNVDYKNIC  136 (145)
T ss_pred             HHhhhhcccchhhHHHHHH-HHHHcCCCCCHHHHHHHHH---HhCCCCCCeEeHHHHH
Confidence            3456778888888877544 44444 4678888887755   4477889999887764

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.03  E-value=0.23  Score=40.89  Aligned_cols=56  Identities=27%  Similarity=0.400  Sum_probs=36.6

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCC---------ChHHHHH-HHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKI---------GEKDISQ-ICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i---------~~e~i~~-i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|... .+......         ++..+.+ +.+-|++.|.|+||.|+.+|..
T Consensus       105 F~~~D~d~dG~is~~E~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~  170 (190)
T d1fpwa_         105 FELYDLNHDGYITFDEMLT-IVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR  170 (190)
T ss_dssp             HHHHCSSCSSEEEHHHHHH-HHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHH
T ss_pred             HHHhccCCCCcCcHHHHHH-HHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            3456899999999888543 23222111         1222222 3455899999999999999865

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=85.83  E-value=0.36  Score=37.69  Aligned_cols=57  Identities=21%  Similarity=0.214  Sum_probs=37.5

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..+.....+.+|.++-.+|+............  -..+.+.|+..|.+++|.|+.+|+.
T Consensus        44 ~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~--~~~l~~aF~~fD~~~~g~I~~~el~  100 (145)
T d2mysb_          44 EELDAMIKEASGPINFTVFLTMFGEKLKGADP--EDVIMGAFKVLDPDGKGSIKKSFLE  100 (145)
T ss_pred             HHHHHHHHhccCceeechhhhhhhhcccccch--HHHHHHHHHhhhhcccchhhHHHHH
Confidence            33444444567778878877655444333333  2345677999999999999999864

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.49  E-value=0.14  Score=35.82  Aligned_cols=45  Identities=18%  Similarity=0.384  Sum_probs=31.3

Q ss_pred             CCCccchhHHHHHHHHHhc-CCC--hHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          335 HNGFISKSEYVIFKLKEMG-KIG--EKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       335 ~~~~~~~~e~~~~~L~~~g-~i~--~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      ++|.++..| +...|...| ..+  ++++.   +-+.+.|.|+||.|+.++-
T Consensus        20 ~~G~I~~~E-l~~~l~~lg~~~~~~~~ei~---~~~~~~D~d~dG~I~f~EF   67 (76)
T d1qx2a_          20 DPNQISKEE-LKLVMQTLGPSLLKGMSTLD---EMIEEVDKNGDGEVSFEEF   67 (76)
T ss_dssp             CTTSEEHHH-HHHHHHHHGGGSCTTSCSHH---HHHHHHCTTCSSEECHHHH
T ss_pred             CCCEECHHH-HHHHHHHhCCcCCCCHHHHH---HHHHHhhcCCCCcCcHHHH
Confidence            468999776 455666665 333  33444   5677789999999998874

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=85.43  E-value=0.11  Score=41.39  Aligned_cols=54  Identities=31%  Similarity=0.447  Sum_probs=39.1

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..|+.. .+... ..++++++..+   |+..|.|+||.|+.+|-.
T Consensus        96 ~F~~~D~d~~G~I~~~e~~~-~~~~~~~~ls~~e~~~i---~~~~D~d~dG~I~~~eF~  150 (156)
T d1dtla_          96 LFRMFDKNADGYIDLEELKI-MLQATGETITEDDIEEL---MKDGDKNNDGRIDYDEFL  150 (156)
T ss_dssp             HHHHHCTTCSSEEEHHHHGG-GGTTC--CCCHHHHHHH---HHHHCTTSSSEEEHHHHH
T ss_pred             HHHHhCcCCCCcCcHHHHHH-HHhhcCCCCCHHHHHHH---HHHhCCCCCCeEeHHHHH
Confidence            35667889999999888643 33333 56778887766   556688999999998753

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.37  E-value=0.44  Score=38.70  Aligned_cols=54  Identities=20%  Similarity=0.142  Sum_probs=38.6

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+++|.++-.||+...-.-..+.+.++  .+..-|+..|.|++|.|+.+|+.
T Consensus        61 ~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~--~~~~~F~~~D~d~~G~Is~~e~~  114 (183)
T d2zfda1          61 DLFDTKHNGILGFEEFARALSVFHPNAPIDD--KIHFSFQLYDLKQQGFIERQEVK  114 (183)
T ss_dssp             HHHCSSCSSSBCHHHHHHHHHHTSTTSCHHH--HHHHHHHHHCTTSSSSEEHHHHH
T ss_pred             HHHccCCCCcCcHHHHHHHHHhhhccCcHHH--HHHHhhcccccCCCCCccHHHHH
Confidence            4567889999999888755433333444443  24456899999999999999874

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.30  E-value=0.57  Score=38.55  Aligned_cols=58  Identities=21%  Similarity=0.232  Sum_probs=36.2

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHH----------HHH-HHHHhhhcCCCCCCccChhhhcc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKD----------ISQ-ICNQFNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~----------i~~-i~~~F~~ld~~~~g~l~~~d~~~  385 (388)
                      +...|.|.+|.++..|+....-.........+          ..+ ..+-|++.|.|+||.|+.+|..+
T Consensus       105 F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~  173 (201)
T d1omra_         105 FSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIE  173 (201)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred             HHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            34568999999999885432222212222111          222 23448999999999999998643

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.05  E-value=0.2  Score=33.95  Aligned_cols=23  Identities=26%  Similarity=0.436  Sum_probs=19.6

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+.|+..|.|++|.|+.+|+.
T Consensus         4 el~~aF~~fD~d~~G~I~~~el~   26 (65)
T d1fw4a_           4 EIREAFRVFDKDGNGYISAAELR   26 (65)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHHHHHHHcCCCCCcCCHHHHH
Confidence            35678889999999999999974

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=84.64  E-value=0.57  Score=38.11  Aligned_cols=15  Identities=27%  Similarity=0.430  Sum_probs=7.7

Q ss_pred             HHHhhhcCCCCCCcc
Q 016527          364 CNQFNRLDPNNCGKI  378 (388)
Q Consensus       364 ~~~F~~ld~~~~g~l  378 (388)
                      .+.|+..|.+++|.|
T Consensus       153 ~~~F~~~D~~~~G~i  167 (182)
T d1y1xa_         153 RNVFAFYDRERTGQV  167 (182)
T ss_dssp             HHHHHHHCTTCCSEE
T ss_pred             HHHHHHhCCCCCCcE
Confidence            344555555555554

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.60  E-value=0.46  Score=34.73  Aligned_cols=49  Identities=18%  Similarity=0.226  Sum_probs=34.6

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      ...| +++|.++..| +...+.+. .++++++.+|   ++..|.|++|.|+.++-
T Consensus        17 ~~~D-~~~G~i~~~e-l~~~l~~~-gl~~~~L~~I---w~~~D~~~dG~l~~~EF   65 (95)
T d2jxca1          17 DSLS-PVNGFLSGDK-VKPVLLNS-KLPVDILGRV---WELSDIDHDGMLDRDEF   65 (95)
T ss_dssp             HHTC-CBTTEEEHHH-HHHHHTTS-SCCHHHHHHH---HHHHCTTCSSEEEHHHH
T ss_pred             HHhC-CCCCceeHHH-HHHHHHHc-CCCHHHHHHH---HHHhcCCCCCeEcHHHH
Confidence            4456 7789998777 34444444 4777776655   55569999999999874

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.38  E-value=0.48  Score=38.21  Aligned_cols=55  Identities=27%  Similarity=0.472  Sum_probs=34.3

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCC---------ChHHHH-HHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKI---------GEKDIS-QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i---------~~e~i~-~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.|.+|.++..|+.. .+......         .+.... .+.+-|++.|.|+||.||.+|-.
T Consensus       102 ~~~D~d~dg~i~~~E~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~  166 (181)
T d1bjfa_         102 SMYDLDGNGYISKAEMLE-IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI  166 (181)
T ss_dssp             HHHCTTCSSCEEHHHHHH-HHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred             HHhccCCCCeecHHHHHH-HHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            456888999999887433 22222110         111122 23344899999999999998753

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=84.11  E-value=0.39  Score=39.29  Aligned_cols=44  Identities=25%  Similarity=0.399  Sum_probs=33.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccCh
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL  380 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~  380 (388)
                      +...+.|.+|.++-.||+..++..         ..+.+.|+..|.|++|.|++
T Consensus       132 ~~~~d~d~dg~I~f~eFi~~~~~l---------~~~~~~F~~~D~~~~G~i~l  175 (186)
T d1df0a1         132 IVARFADDELIIDFDNFVRCLVRL---------EILFKIFKQLDPENTGTIQL  175 (186)
T ss_dssp             HHHHHCCSTTEECHHHHHHHHHHH---------HHHHHHHHHHCTTCCSEEEE
T ss_pred             HHHHHcCCCCeEeHHHHHHHHHHH---------HHHHHHHHHhCCCCCCcEEe
Confidence            344577888999988887766432         46677899999999998865

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=83.96  E-value=0.2  Score=40.40  Aligned_cols=53  Identities=13%  Similarity=0.197  Sum_probs=39.5

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.|++|.++..|+. ..+... .++++++.   .-|+..|.|+||.|+.+|..
T Consensus       110 ~F~~~D~d~~G~Is~~E~~-~~l~~~-~l~~~~~~---~~f~~~D~d~dG~i~~~EF~  162 (185)
T d2sasa_         110 LFKGMDVSGDGIVDLEEFQ-NYCKNF-QLQCADVP---AVYNVITDGGKVTFDLNRYK  162 (185)
T ss_dssp             HHHHHCTTSSSCCCHHHHH-HHTTSS-CCCCSSHH---HHHHHHHTTTTSCCSHHHHH
T ss_pred             HHHHHccCCCccCCHHHHH-HHHHHc-CCCHHHHH---HHHHHcCCCCCCCCcHHHHH
Confidence            3566789999999998864 344444 46777766   45677889999999998864

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.89  E-value=0.7  Score=36.72  Aligned_cols=56  Identities=23%  Similarity=0.412  Sum_probs=38.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHH--hcCCChHHHHHHH-HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKE--MGKIGEKDISQIC-NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~--~g~i~~e~i~~i~-~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..|... .+..  ...++++..+... +-|++.|.|+||.|+.+|..
T Consensus        91 f~~~d~d~~g~Is~~el~~-~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~  149 (165)
T d1auib_          91 FRIYDMDKDGYISNGELFQ-VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFC  149 (165)
T ss_dssp             HHHHCTTCSSEECHHHHHH-HHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHH
T ss_pred             HHHhcccccccccHHHHHH-HHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHH
Confidence            3456788899998877443 3332  2344555555554 45899999999999999853

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.87  E-value=0.24  Score=36.40  Aligned_cols=29  Identities=14%  Similarity=0.153  Sum_probs=26.5

Q ss_pred             CChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          355 IGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       355 i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++++|..++.+-|+.+| +++|.|+.+++.
T Consensus         4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~   32 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVK   32 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-CBTTEEEHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCceeHHHHH
Confidence            68899999999999999 899999998875

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.70  E-value=0.45  Score=39.24  Aligned_cols=53  Identities=23%  Similarity=0.290  Sum_probs=39.8

Q ss_pred             hhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          329 LAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       329 ~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ...|.+.+|.++-.||+...........++.+.   .-|+..|.|++|.|+.+|+.
T Consensus        70 ~~~D~~~~G~I~f~EF~~~~~~~~~~~~~~~l~---~~F~~~D~d~~G~is~~E~~  122 (201)
T d1omra_          70 RSFDANSDGTLDFKEYVIALHMTSAGKTNQKLE---WAFSLYDVDGNGTISKNEVL  122 (201)
T ss_dssp             HTTTSCSSSEEEHHHHHHHHHHHHSSCGGGSHH---HHHHHHCTTCSSSBCHHHHH
T ss_pred             HHhccCCCCeEeehhHHHHHHhhcccchHHHHH---HHHHHHccCCCCccCHHHHH
Confidence            446788899999999987665555544454444   55788899999999999864

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.30  E-value=0.17  Score=38.34  Aligned_cols=31  Identities=26%  Similarity=0.288  Sum_probs=23.3

Q ss_pred             CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          354 KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       354 ~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+++++...+.+.|+..|.|++|.|+.+++.
T Consensus        15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~   45 (110)
T d1iq3a_          15 RITEEQREYYVNQFRSLQPDPSSFISGSVAK   45 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHH
T ss_pred             ccCHHHHHHHHHHHHHhCCCcccchhHHHHH
Confidence            5677777777777888888888888777654

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=83.00  E-value=0.61  Score=36.57  Aligned_cols=56  Identities=21%  Similarity=0.403  Sum_probs=41.8

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHh-cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEM-GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~-g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+...|.+++|.++..+. ...|... .+++++++..+.+.++ .+.|++|.|+-++.+
T Consensus        87 aF~~~D~~~~G~I~~~el-~~~l~~~g~~ls~~e~~~l~~~~d-~~~d~~G~I~y~eF~  143 (152)
T d1wdcc_          87 AFKTFDREGQGFISGAEL-RHVLTALGERLSDEDVDEIIKLTD-LQEDLEGNVKYEDFV  143 (152)
T ss_dssp             HHHTTCSSSSSEEEHHHH-HHHHHHSSSCCCHHHHHHHHHHHT-CCCCTTSEEEHHHHH
T ss_pred             hhhccccccCccchHHHH-HHHHHHcCCCCCHHHHHHHHHHhc-cCCCCCCEEEHHHHH
Confidence            355678899999998885 4555555 6688999998877774 445678999988764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=82.81  E-value=0.26  Score=34.91  Aligned_cols=23  Identities=30%  Similarity=0.491  Sum_probs=19.9

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+.|+..|.|++|.|+.+||.
T Consensus        16 ~l~~~F~~~D~d~~G~I~~~el~   38 (81)
T d1fi5a_          16 ELSDLFRMFDKNADGYIDLEELK   38 (81)
T ss_dssp             HHHHHHHHHCSSCSSEECHHHHH
T ss_pred             HHHHHHHHHcCCCCCcccHHHHH
Confidence            45678999999999999999984

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=82.76  E-value=0.31  Score=36.03  Aligned_cols=45  Identities=11%  Similarity=0.137  Sum_probs=30.6

Q ss_pred             CCccchhHHHHHHHHHhc---CCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          336 NGFISKSEYVIFKLKEMG---KIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       336 ~~~~~~~e~~~~~L~~~g---~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .|.++..|. ...+...+   ..+++++.   +-++++|.|+||.|+.++-+
T Consensus        30 ~g~is~~El-~~~l~~~~~~~~~~~~~v~---~l~~~~D~d~DG~IdF~EF~   77 (98)
T d1yuta1          30 KDSLSVNEF-KELVTQQLPHLLKDVGSLD---EKMKSLDVNQDSELKFNEYW   77 (98)
T ss_dssp             SSCBCHHHH-HHHHHHHCTTTTCCSSCHH---HHHHHHCTTCCSCBCHHHHH
T ss_pred             CCEEcHHHH-HHHHHHhccccCCCHHHHH---HHHHHhcCCCCCcCCHHHHH
Confidence            488998885 44554432   23555554   55677899999999988753

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=82.69  E-value=0.65  Score=35.95  Aligned_cols=53  Identities=9%  Similarity=0.147  Sum_probs=37.6

Q ss_pred             hcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          332 DMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       332 ~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +.+++|.++-.+|..........-.......+.+.|+.+|.|++|.|+.+|+.
T Consensus        52 d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~  104 (145)
T d2mysc_          52 EEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELR  104 (145)
T ss_pred             cccccCccchhHHHHHHhhhhhccccchHHHHHHHHHHhhcCCCCEEcHHHHH
Confidence            44456777777776555444444444555567788999999999999999874

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.67  E-value=0.55  Score=37.77  Aligned_cols=45  Identities=13%  Similarity=0.367  Sum_probs=34.0

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccCh
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL  380 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~  380 (388)
                      .+...+.|.+|.++..||+..+..         +..+.+.|+..|.|++|.|+.
T Consensus       117 ~~~~~d~d~~G~i~~~EF~~~~~~---------~~~~~~~f~~~D~d~~G~it~  161 (173)
T d1alva_         117 MIIRRYSDEGGNMDFDNFISCLVR---------LDAMFRAFKSLDKDGTGQIQV  161 (173)
T ss_dssp             HHHHHHTCSSSCBCHHHHHHHHHH---------HHHHHHHHHHHSSSCCSEEEE
T ss_pred             HhhccccCCCCeEeHHHHHHHHHH---------HHHHHHHHHHhCCCCCCcEEe
Confidence            344556788999999998776532         356678899999999998864

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=82.66  E-value=0.23  Score=40.70  Aligned_cols=53  Identities=21%  Similarity=0.406  Sum_probs=39.7

Q ss_pred             hhhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          327 DLLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       327 ~l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      -+...|.+++|.++..+. ...+.+.| ++++++..+   |+..|.|+||.|+.+|-.
T Consensus        87 aF~~~D~d~~G~i~~~el-~~~l~~~g-l~~~ev~~~---f~~~D~d~DG~Is~~EF~  139 (182)
T d1s6ia_          87 AFSYFDKDGSGYITLDEI-QQACKDFG-LDDIHIDDM---IKEIDQDNDGQIDYGEFA  139 (182)
T ss_dssp             HHHHTTTTCSSEEEHHHH-HHTTTTTT-CCTTHHHHH---HHHHCSSSSSEEETTHHH
T ss_pred             HHHHHhhcCCCccchhhh-hhhhhhcC-ccHHHHHHH---HHHhhcCCCCeEeHHHHH
Confidence            345678889999998774 45555555 788888765   666699999999998753

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.23  E-value=0.22  Score=38.50  Aligned_cols=55  Identities=20%  Similarity=0.323  Sum_probs=39.3

Q ss_pred             hhhhhhhcCCCCccchhHHHHHHHHHhc-CCChHHHHHHHHHhhhcCCCCCCccChhhhcc
Q 016527          326 DDLLAADMNHNGFISKSEYVIFKLKEMG-KIGEKDISQICNQFNRLDPNNCGKITLPDLLE  385 (388)
Q Consensus       326 ~~l~~~~~d~~~~~~~~e~~~~~L~~~g-~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~~  385 (388)
                      +.+...|.+++|.++..+. ...|...| ..+++++..+.+    .|.|++|.|+.+|.+.
T Consensus        81 ~aF~~~D~d~~G~I~~~el-~~~l~~~g~~~~~~e~~~l~~----~~~d~dg~I~~~eF~~  136 (139)
T d1w7jb1          81 EGFRVFDKEGNGKVMGAEL-RHVLTTLGEKMTEEEVETVLA----GHEDSNGCINYEAFLK  136 (139)
T ss_dssp             HHHHTTCTTSSSEEEHHHH-HHHHHHSSSCCCHHHHHHHHT----TCCCTTSEEEHHHHHH
T ss_pred             HhhhhccCCCCCeEeHHHH-HHHHHHhCCCCCHHHHHHHHh----hCCCCCCeEeHHHHHH
Confidence            3456778888999987775 55666666 567777766542    3678899999888654

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.17  E-value=0.76  Score=35.61  Aligned_cols=65  Identities=12%  Similarity=0.151  Sum_probs=36.1

Q ss_pred             hhccchhhhhhh-----hcCCCCccchhHHHHHHHH---HhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          320 QREITIDDLLAA-----DMNHNGFISKSEYVIFKLK---EMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       320 ~~~~t~~~l~~~-----~~d~~~~~~~~e~~~~~L~---~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +..++.+++..+     +.+.++.++-.++......   ......+...+.+.+.|+..|.+++|.|+.+|+.
T Consensus        32 g~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~  104 (146)
T d1m45a_          32 GYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLR  104 (146)
T ss_dssp             TCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHH
T ss_pred             CCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHHHHHHHHhhccccccccchhhhh
Confidence            445555544332     2333566666665443211   1111112222356678999999999999999875

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.13  E-value=0.61  Score=37.47  Aligned_cols=38  Identities=24%  Similarity=0.482  Sum_probs=25.4

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccCh
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITL  380 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~  380 (388)
                      |.+|.++..+|+..+..         +..+.+.|++.|.|++|.|++
T Consensus       123 d~~g~i~~~eF~~~~~~---------~~~~~~~f~~~D~d~~G~Itl  160 (172)
T d1juoa_         123 STNGKITFDDYIACCVK---------LRALTDSFRRRDTAQQGVVNF  160 (172)
T ss_dssp             CSSSSEEHHHHHHHHHH---------HHHHHHHHHHTCTTCCSEEEE
T ss_pred             HhcCCcCHHHHHHHHHH---------HHHHHHHHHHhCCCCCCcEEe
Confidence            55666666666543332         234567899999999999865

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=81.91  E-value=0.22  Score=34.10  Aligned_cols=23  Identities=26%  Similarity=0.449  Sum_probs=20.3

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+.|+..|.|++|.|+.+||.
T Consensus         3 el~~~F~~~D~d~~G~I~~~el~   25 (68)
T d1c7va_           3 EILRAFKVFDANGDGVIDFDEFK   25 (68)
T ss_dssp             HHHHHHHHHSCSGGGEECHHHHH
T ss_pred             HHHHHHHHHcCCCcCeEcHHHHH
Confidence            46688999999999999999985

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.86  E-value=0.48  Score=38.62  Aligned_cols=56  Identities=23%  Similarity=0.479  Sum_probs=35.0

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHh----c---CC--ChHHHHH-HHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEM----G---KI--GEKDISQ-ICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~----g---~i--~~e~i~~-i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.|++|.++..|... .+...    +   ..  +++...+ +.+-|++.|.|+||.||.+|-.
T Consensus       102 F~~~D~d~dG~i~~~El~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~  167 (187)
T d1g8ia_         102 FKLYDLDNDGYITRNEMLD-IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ  167 (187)
T ss_dssp             HHHHCTTCSSEEEHHHHHH-HHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred             HHHHhcCCCCeEcHHHHHH-HHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            4567899999999887432 22211    1   11  1222222 3345899999999999998753

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=81.82  E-value=0.7  Score=34.51  Aligned_cols=46  Identities=15%  Similarity=0.191  Sum_probs=31.2

Q ss_pred             CCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          334 NHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       334 d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +.++.++..+|+...-  ....+++   .+.+.|+..|.|++|.|+.+++.
T Consensus        19 ~~~~~i~f~eF~~~~~--~~~~~~~---~~~~~F~~~D~d~~G~I~~~El~   64 (109)
T d1rwya_          19 TAADSFDHKKFFQMVG--LKKKSAD---DVKKVFHILDKDKSGFIEEDELG   64 (109)
T ss_dssp             CSTTCCCHHHHHHHHT--GGGSCHH---HHHHHHHHHSTTCSSEECHHHHH
T ss_pred             ccCCCcCHHHHHHHHc--cccCCHH---HHHHHhhcccCCCCCcCcHHHHH
Confidence            4556777777754321  2222333   45577999999999999999875

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=81.76  E-value=0.89  Score=36.26  Aligned_cols=55  Identities=22%  Similarity=0.293  Sum_probs=37.3

Q ss_pred             hhhcCCCCccchhHHHHHHHHHh------cCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          330 AADMNHNGFISKSEYVIFKLKEM------GKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       330 ~~~~d~~~~~~~~e~~~~~L~~~------g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ..+.++++.++..++....-...      ..........+...|+..|.|++|.|+.+|+.
T Consensus        68 ~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~  128 (185)
T d2sasa_          68 RADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ  128 (185)
T ss_dssp             HHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHH
T ss_pred             HhCcCCCCcEeeeHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHH
Confidence            34667788888777654433222      22223344456778999999999999999974

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.42  E-value=0.32  Score=34.35  Aligned_cols=28  Identities=14%  Similarity=0.288  Sum_probs=23.2

Q ss_pred             hHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          357 EKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       357 ~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .+....+.+.|...|.+++|.|+..|+.
T Consensus        16 ~~~~~~l~~~F~~~D~~~~G~i~~~ef~   43 (83)
T d1wlza1          16 TSHYHAITQEFENFDTMKTNTISREEFR   43 (83)
T ss_dssp             HHTHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCceEChhHHH
Confidence            3345667789999999999999999874

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.22  E-value=0.64  Score=35.58  Aligned_cols=50  Identities=12%  Similarity=0.156  Sum_probs=31.6

Q ss_pred             CCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          335 HNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       335 ~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      .++.++-.++....-............++.+.|+.+|.+++|.|+.+|+.
T Consensus        51 ~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~  100 (139)
T d1w7jb1          51 KSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELR  100 (139)
T ss_dssp             TTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHH
T ss_pred             cCCceeeeccchhhHhhhhhccccHHHHHHHhhhhccCCCCCeEeHHHHH
Confidence            44666666666555444454455555667788999999999999999983

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.82  E-value=0.62  Score=37.47  Aligned_cols=57  Identities=32%  Similarity=0.497  Sum_probs=34.4

Q ss_pred             hhhhhcCCCCccchhHHHHHH--H-HHhcC-----CChHHHHHHH-HHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFK--L-KEMGK-----IGEKDISQIC-NQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~--L-~~~g~-----i~~e~i~~i~-~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+.+|.++..|.....  + ..++.     .+++..+++. .-|++.|.|+||.||.+|..
T Consensus        93 f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~  158 (178)
T d1s6ca_          93 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL  158 (178)
T ss_dssp             HHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence            345688899999988754321  1 22222     2222223333 45899999999999998854

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=80.72  E-value=0.58  Score=36.89  Aligned_cols=54  Identities=24%  Similarity=0.370  Sum_probs=32.7

Q ss_pred             hhcCCCCccchhHHHHHHHHHhcCC-ChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          331 ADMNHNGFISKSEYVIFKLKEMGKI-GEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       331 ~~~d~~~~~~~~e~~~~~L~~~g~i-~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+++|.++..+++.........- .......+.+.|+..|.|++|.|+.+|+.
T Consensus        65 ~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~  119 (162)
T d1topa_          65 VDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELG  119 (162)
T ss_dssp             HCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred             eccCCCCCeeeehhhhhhhhhhhhhcccCcHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence            4555666666666544333222111 12223345567999999999999999875

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=80.71  E-value=0.79  Score=33.16  Aligned_cols=48  Identities=17%  Similarity=0.179  Sum_probs=32.3

Q ss_pred             hcCC-CCccchhHHHHHHHHHhc------CCChHHHHHHHHHhhhcCCCCCCccChhhh
Q 016527          332 DMNH-NGFISKSEYVIFKLKEMG------KIGEKDISQICNQFNRLDPNNCGKITLPDL  383 (388)
Q Consensus       332 ~~d~-~~~~~~~e~~~~~L~~~g------~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~  383 (388)
                      +.|. .|.+++.|. ...|...+      ..+++++.   +-|+++|.|+||.|+.++-
T Consensus        20 d~dg~~G~is~~El-~~~L~~~~~~~~~~~~~~~~~~---~~~~~~D~d~dG~Idf~EF   74 (93)
T d1zfsa1          20 GKEGDKYKLSKKEL-KDLLQTELSSFLDVQKDADAVD---KIMKELDENGDGEVDFQEF   74 (93)
T ss_dssp             GGSSCCSSEEHHHH-HHHHHHHSTTTSCCSSCHHHHH---HHHHHHTTTCCSEECSHHH
T ss_pred             ccCCCCCEecHHHH-HHHHHHhcccccccCCCHHHHH---HHHHHHcCCCCCCCcHHHH
Confidence            4443 478988874 45555543      33455444   5588889999999998874

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.60  E-value=0.66  Score=36.88  Aligned_cols=55  Identities=18%  Similarity=0.131  Sum_probs=40.5

Q ss_pred             hhhhhcCCCCccchhHHHHHHHHHhcCCChHHHHHHHHHhhhcCCCCCCccChhhhc
Q 016527          328 LLAADMNHNGFISKSEYVIFKLKEMGKIGEKDISQICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       328 l~~~~~d~~~~~~~~e~~~~~L~~~g~i~~e~i~~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      +...|.+++|.++..||+.........  ......+...|+..|.|++|.|+.+++.
T Consensus        54 ~~~~d~~~~g~i~~~EFl~~~~~~~~~--~~~~~~~~~~f~~~d~d~~g~Is~~el~  108 (165)
T d1auib_          54 IDIFDTDGNGEVDFKEFIEGVSQFSVK--GDKEQKLRFAFRIYDMDKDGYISNGELF  108 (165)
T ss_dssp             HHHHCTTCSSSEEHHHHHHHHGGGCTT--CCHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             HHHHccccchhhhhhhhhhhccccccc--hhhHHHHHHHHHHhcccccccccHHHHH
Confidence            355678889999999987544333222  2345567788999999999999999875

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=80.23  E-value=0.36  Score=33.64  Aligned_cols=23  Identities=30%  Similarity=0.430  Sum_probs=19.7

Q ss_pred             HHHHHhhhcCCCCCCccChhhhc
Q 016527          362 QICNQFNRLDPNNCGKITLPDLL  384 (388)
Q Consensus       362 ~i~~~F~~ld~~~~g~l~~~d~~  384 (388)
                      ++.+.|+..|.|++|.|+..|+.
T Consensus        10 el~~~F~~fD~~~~G~I~~~el~   32 (75)
T d1jc2a_          10 ELANCFRIFDKNADGFIDIEELG   32 (75)
T ss_dssp             HHHHHHHHHCCSTTSSEEHHHHH
T ss_pred             HHHHHHHHHcCCCcCeEcHHHHH
Confidence            45678999999999999999874