Citrus Sinensis ID: 016535
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 388 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XEE9 | 463 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.987 | 0.827 | 0.760 | 1e-178 | |
| Q5R7Z6 | 492 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.961 | 0.758 | 0.460 | 2e-92 | |
| Q2TAA5 | 492 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.961 | 0.758 | 0.457 | 7e-92 | |
| Q3TZM9 | 492 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.971 | 0.766 | 0.443 | 1e-91 | |
| Q08B22 | 486 | GDP-Man:Man(3)GlcNAc(2)-P | N/A | no | 0.881 | 0.703 | 0.482 | 5e-91 | |
| Q6P312 | 487 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.902 | 0.718 | 0.473 | 1e-88 | |
| Q7ZW24 | 500 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.979 | 0.76 | 0.433 | 7e-88 | |
| Q54DM9 | 505 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.902 | 0.693 | 0.458 | 6e-85 | |
| P53993 | 470 | Uncharacterized glycosylt | yes | no | 0.927 | 0.765 | 0.401 | 4e-74 | |
| Q8X092 | 556 | GDP-Man:Man(3)GlcNAc(2)-P | N/A | no | 0.891 | 0.622 | 0.389 | 1e-67 |
| >sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 292/384 (76%), Positives = 332/384 (86%), Gaps = 1/384 (0%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
MA Y IL + ++T + A L L V NAR++R +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59
Query: 61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
IQEE+PDLDC+++TGDHD+ DSL RAVDRFGV L PPKV+HL +RKWIEESTYP FT
Sbjct: 60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119
Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
MIGQS GSVYL+WEAL FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179
Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
VR+ +SMYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239
Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
IP+RI RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299
Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360
D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR+LV+LLG AV G+
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLGNAVAGL 359
Query: 361 HSMIDEHFGISVVEYMAAGAIPIG 384
H MIDEHFGISVVEYMAAGAIPI
Sbjct: 360 HGMIDEHFGISVVEYMAAGAIPIA 383
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Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1 |
| >sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/380 (46%), Positives = 240/380 (63%), Gaps = 7/380 (1%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L L S N + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLQRKKKLVSTSKNGKNQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD + +L A RF + L+HP + V L +R +E+S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + I GC+V Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 214 NIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 273
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVAL-RKLDAD 301
VYPPCD +PL P ++SV QFRPEK HPLQ+ AF+ L +K+
Sbjct: 274 CTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVES 333
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L F+G CRNK DE R+ L+ S +L V VEF N+ + +L L A +G+H
Sbjct: 334 PPSLKLVFIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAI 381
+M +EHFGI VVE MAAG I
Sbjct: 394 TMWNEHFGIGVVECMAAGTI 413
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Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 337 bits (865), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/380 (45%), Positives = 239/380 (62%), Gaps = 7/380 (1%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L L S N + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLQRKKKLVSTSKNGKNQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD + +L A RF + L+HP + V L +R +E+S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + I GC+V Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 214 NIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 273
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVAL-RKLDAD 301
VYPPCD +PL P ++SV QFRPEK HPLQ+ AF+ L +K+
Sbjct: 274 CTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVES 333
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L +G CRNK DE R+ L+ S +L V VEF N+ + +L L A +G+H
Sbjct: 334 PPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAI 381
+M +EHFGI VVE MAAG I
Sbjct: 394 TMWNEHFGIGVVECMAAGTI 413
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Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/390 (44%), Positives = 244/390 (62%), Gaps = 13/390 (3%)
Query: 5 GILIWAVITAVLA-SILILASHVHNARRNRTTS--------VAFFHPNTNDGGGGERVLW 55
G++I V+ L + ++ H+ +++ +TS VAFFHP N GGGGERVLW
Sbjct: 24 GLMICGVLCVYLVIGLWVIRWHLQRKKKSVSTSKNGKEQTVVAFFHPYCNAGGGGERVLW 83
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q++ P+ +VYTGD + +L A RF ++L HP + V L +R +E+S
Sbjct: 84 CALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRFNIKLAHPVQFVFLRKRYLVEDSR 143
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS+ L WEAL + P Y D+ GYAFT PL + + GCRV Y HYPTIS
Sbjct: 144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTIS 203
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S V+ + +NN A I+++ LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +
Sbjct: 204 TDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLN 263
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFS 292
HI LW + VYPPCD +PL P ++S+ QFRPEK H LQ++AF+
Sbjct: 264 HILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRPEKNHALQIKAFA 323
Query: 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351
L + A+L +L +G CRNK DE R+ L+ S L V NVEF N+ + +L
Sbjct: 324 KLLNEKAAELGHSLKLVLIGGCRNKDDEFRVNQLRSLSENLGVQENVEFKINISFDELKN 383
Query: 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
L A +G+H+M +EHFGI VVE MAAG +
Sbjct: 384 YLSEATIGLHTMWNEHFGIGVVECMAAGTV 413
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Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 334 bits (857), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 223/348 (64%), Gaps = 6/348 (1%)
Query: 38 AFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELL 97
AFFHP N GGGGERVLWCA++++Q+ D ++YTGD DA + +L A RF ++L
Sbjct: 62 AFFHPYCNAGGGGERVLWCALRSLQKRYKDAIYVIYTGDKDASEEQILNGAAARFNIKLS 121
Query: 98 HPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA 157
HP + + L +R +E S YPRFT++GQS GSV L WEAL K P Y D+ GYAFT PL
Sbjct: 122 HPVRFIFLEKRGLVEASCYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLF 181
Query: 158 RIF-GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216
+ GC V CY HYPTIS+DM+S VR + +NN A I+ + LS+ K++YY F+ YG
Sbjct: 182 KYLGGCHVGCYVHYPTISMDMLSVVRSQHARFNNAAFISNNPVLSRLKLIYYYLFALFYG 241
Query: 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--RSTEYPAIIS 274
VGSC+D+ MVNS+WT SHI LW DR VYPPCD + + + E +++S
Sbjct: 242 WVGSCSDVIMVNSTWTFSHILDLWKCSDRTSIVYPPCDVQTFLEIDINQHKENEEHSVVS 301
Query: 275 VAQFRPEKAHPLQLEAFSVALRKLDADL-PRPRLQFVGSCRNKSDEERLQSLKDKSIELK 333
+ QFRPEK HPLQ+ AF+ L K A+ + +L +G CRN DE R+ LK S EL
Sbjct: 302 IGQFRPEKDHPLQIRAFAALLEKKTAEQRAKLKLILIGGCRNDEDELRVSELKKLSSELG 361
Query: 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
+ VEF N+ + +L K L A +G+H+M +EHFGI +VE MAAG I
Sbjct: 362 IP--VEFKVNVPFEELKKHLSEATIGLHTMWNEHFGIGIVECMAAGTI 407
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Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/357 (47%), Positives = 231/357 (64%), Gaps = 7/357 (1%)
Query: 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87
+ ++ R VAFFHP N GGGGERVLWCA++++Q+ D ++YTGD D + +L
Sbjct: 56 DGKKKRV--VAFFHPYCNAGGGGERVLWCALRSLQKRYKDAIYVIYTGDKDVSEEQILNG 113
Query: 88 AVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDT 147
A RF ++L HP K + L +R +E S YPRFT++GQS GSV L WEAL K P Y D+
Sbjct: 114 AAARFNIKLSHPVKFIFLEKRGLVEASFYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDS 173
Query: 148 SGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206
GYAFT PL + + GC+V CY HYPTIS+DM+S VR ++ +NN A I+ + LS+ K++
Sbjct: 174 MGYAFTLPLFKYVGGCQVGCYVHYPTISMDMLSVVRSQNARFNNAAFISNNPVLSRLKLI 233
Query: 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264
YY F+ +YG VGSC+D+ MVNS+WT +HI LW +R VYPPCD + L
Sbjct: 234 YYYLFAVIYGWVGSCSDVIMVNSTWTFAHILDLWKCSERTSIVYPPCDVQTFLDINLNQH 293
Query: 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQS 324
+ E +I+S+ QFRPEK HPLQ+ AF+ L+K + + +L +G CRN DE R+
Sbjct: 294 KDIEEHSIVSIGQFRPEKDHPLQICAFAALLKKKTTEKLKLKLILIGGCRNNEDELRVSE 353
Query: 325 LKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
LK S EL + VEF N+ + +L K L A +G+H+M +EHFGI +VE MAAG I
Sbjct: 354 LKKLSSELGIP--VEFKVNIPFAELKKHLSEATIGLHTMWNEHFGIGIVECMAAGTI 408
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Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 324 bits (830), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 236/397 (59%), Gaps = 17/397 (4%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTT-----SVAFFHPNTNDGGGGERVLW 55
M P L + + T + I+ + S + R+ R +VAFFHP N GGGGERVLW
Sbjct: 22 MLPCFYLSFLLTTILFLFIMGVRSWLQMKRKTRRVQDGRPAVAFFHPYCNAGGGGERVLW 81
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q D+ +VYTGD + +L A RF + L P K V L R +E
Sbjct: 82 CALRALQNRYQDVSFVVYTGDQGVTAEEILDGARRRFNIRLPRPVKFVFLKHRLLVEAKL 141
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS++L WEAL +F P Y D+ G+AFT P+ R + GC+V Y HYPTIS
Sbjct: 142 YPHFTLLGQSVGSIFLGWEALTEFVPDLYIDSMGFAFTLPVFRYLGGCQVGSYVHYPTIS 201
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S VRE + +NN I+ + LS K++YY F+ +YGL GSC+D+ MVNS+WT
Sbjct: 202 TDMLSVVRERNPRFNNADYISSNPVLSAIKVIYYCVFALLYGLAGSCSDVIMVNSTWTLG 261
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYP------AIISVAQFRPEKAHPLQL 288
HI LW P+R VYPPCD +P+ E +++SV QFRPEK H LQ+
Sbjct: 262 HILALWRTPNRTSVVYPPCDVQAFLDVPIGEDNEEKEQKKCHSLVSVGQFRPEKDHQLQI 321
Query: 289 EAFSVALRKLDADLPRPR----LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344
AF L + +A+ P R L +G CRN+ DE+R+ L+ EL + VEF N+
Sbjct: 322 RAFKKLLDRKEAE-PAGREAVKLVLIGGCRNQEDEDRVLMLRGLCQELGIADRVEFKLNI 380
Query: 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
+++L K L A +G+H+M +EHFGI +VE MAAG I
Sbjct: 381 PFQELKKDLTDATIGLHTMWNEHFGIGIVECMAAGTI 417
|
Danio rerio (taxid: 7955) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 314 bits (805), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 226/360 (62%), Gaps = 10/360 (2%)
Query: 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE 95
S+ FFHP GGGGERVLWCA+K+IQEE P + C+VYTGD ++ D + + F +E
Sbjct: 63 SIGFFHPYCTAGGGGERVLWCAIKSIQEEYPYVRCVVYTGDKES-DDEIFNKVKKTFDIE 121
Query: 96 LLHPP-KVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY 154
L + + L +RKW+E STYPRFT+IGQS GS+ L WEAL KF P + D+ GYAFT+
Sbjct: 122 LGRDNLEFIRLKKRKWVEASTYPRFTLIGQSLGSMILGWEALTKFVPTIFLDSMGYAFTF 181
Query: 155 PL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW 213
P+ + I G V CY HYPTIS DMIS V+ S +NN+ SI+ + + + K++YY FS
Sbjct: 182 PIFSLIGGSTVACYVHYPTISSDMISSVKSSSYSFNNDVSISSNKFKTISKLIYYNIFSK 241
Query: 214 MYGLVGSCADLAMVNSSWTQSHIEKLWG--IPDRIKRVYPPCDTSGLQVLPL--ERSTEY 269
+Y +VGS + L MVN +WT +HI +W + VYPP D G + L L T
Sbjct: 242 IYQIVGSFSKLVMVNGTWTGNHIRDIWKKQFGYDLFIVYPPVDVKGRKQLKLGWMDGTRK 301
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP---RLQFVGSCRNKSDEERLQSLK 326
I+S+AQFRPEK H LQL + L K + +P +L VG R+++D +R++ L+
Sbjct: 302 NMILSIAQFRPEKNHQLQLRTLAHLLEKYPSHREQPLNTKLVLVGGVRDQADRDRVEQLR 361
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386
+ S EL ++ +VEF + L +LL A VGIH+M +EHFGI VVE MAAG IP+ +
Sbjct: 362 NLSKELNIEDHVEFQIGISSDQLNQLLSEASVGIHTMYNEHFGIGVVELMAAGVIPVANN 421
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 278 bits (712), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 213/369 (57%), Gaps = 9/369 (2%)
Query: 20 LILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDA 79
LI+ +++ R ++ +VAFFHP N GGGGERVLW A++ +Q++ PD VY+GD DA
Sbjct: 26 LIIPFSLYSGFRRKSKTVAFFHPYCNAGGGGERVLWAAIRTMQKKFPDHKYFVYSGDTDA 85
Query: 80 FPDSLLARAVDRFGVELLHPPKV--VHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALC 137
+ +L +A RFG+EL P + ++L+ R +E Y TM+ Q+ + L+ EA
Sbjct: 86 TKEQILLKARQRFGIEL-DPSNIQFIYLHWRTLVEARHYKHCTMLFQALAGLILALEAWF 144
Query: 138 KFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197
+ P + D+ GY + P R+ G +V+ Y HYPTIS DM+ V +NN+++IAQS
Sbjct: 145 RMVPAVFIDSMGYPLSLPAFRLSGSKVVAYVHYPTISCDMLDVVESRQETFNNSSTIAQS 204
Query: 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSG 257
N LS K+ YY F+ +Y L G A + MVN SWTQ HI +W D + VYPPCD
Sbjct: 205 NVLSWGKLTYYRLFACLYWLAGKAAHVGMVNGSWTQRHITSIWSRRD-VSIVYPPCDVEA 263
Query: 258 LQVLP-----LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGS 312
+ L T+ ++SV Q RPEK H LQLE L+ L G
Sbjct: 264 FLNIESVAESLLEDTKTVRLLSVGQIRPEKNHKLQLEVLHDVKEPLEKMGYNVELCIAGG 323
Query: 313 CRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISV 372
CRN+ D+ER++ LK+++ +L + + + N+ Y DLV L A++ IH+M +EHFGISV
Sbjct: 324 CRNEEDQERVKMLKNEAEKLDISEQLIWQLNVPYEDLVVELSKALISIHTMHNEHFGISV 383
Query: 373 VEYMAAGAI 381
VE MAA I
Sbjct: 384 VEAMAASTI 392
|
Caenorhabditis elegans (taxid: 6239) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 207/370 (55%), Gaps = 24/370 (6%)
Query: 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL 96
V FFHP N GGGGERVLW A++A Q+ P C+VYTGDHD +++L+R RF + L
Sbjct: 102 VGFFHPFCNAGGGGERVLWAAIRATQKRWPKAKCVVYTGDHDVSKEAILSRVEQRFNIHL 161
Query: 97 LHPPKVVHLY--RRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY 154
HPP V LY R+W+ ST+P FT+ GQSFGS+ ++W+A P + DT GYAF
Sbjct: 162 -HPPTVNFLYLSTRRWVLASTWPYFTLAGQSFGSLIMAWDAFSLLVPDIFVDTMGYAFAL 220
Query: 155 PLARIFGCRV--ICYTHYPTISLDMISRVREGSSMYNNNASIAQ-SNWLSQCKIVYYTFF 211
+R V Y HYPTIS DM+ + S++ + + + + + K +Y+ F
Sbjct: 221 GFSRFLFRDVPTAAYVHYPTISTDMLESLDPASAVGSQGVNAGKGTGAKGRAKKIYWQLF 280
Query: 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWG--------IP------DRIKRVYPPCDTSG 257
+ +Y L+G+ D+ M NS+WTQ+HIEKLWG +P + I VYPP
Sbjct: 281 ARLYSLMGASVDVVMTNSTWTQAHIEKLWGPVRNLTGAVPGIKSKVNPIAVVYPPVAVEE 340
Query: 258 LQVL----PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC 313
L+ P ++ +AQFRPEK H L ++AF+ L+ +L VGS
Sbjct: 341 LEQEVEVSPESEKRRENVLLYIAQFRPEKNHQLIVQAFAEFLKSGSEAARDAKLVLVGSV 400
Query: 314 RNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVV 373
R+ D +R+ L+ EL + VEF+ + + D+++ L A VG++ M +EHFGI VV
Sbjct: 401 RDDYDSKRVYKLRLLVNELHIKDRVEFHLDASWPDILEWLRRASVGVNGMWNEHFGIGVV 460
Query: 374 EYMAAGAIPI 383
EY AAG I +
Sbjct: 461 EYQAAGLISV 470
|
Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 388 | ||||||
| 224119626 | 466 | predicted protein [Populus trichocarpa] | 0.981 | 0.817 | 0.785 | 0.0 | |
| 255574810 | 465 | glycosyl transferase, putative [Ricinus | 0.981 | 0.819 | 0.782 | 0.0 | |
| 225448485 | 463 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.981 | 0.822 | 0.772 | 1e-178 | |
| 449460937 | 463 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.976 | 0.818 | 0.781 | 1e-178 | |
| 42569790 | 463 | alpha-1,2-mannosyltransferase [Arabidops | 0.987 | 0.827 | 0.760 | 1e-176 | |
| 297789912 | 463 | glycosyl transferase family 1 protein [A | 0.974 | 0.816 | 0.753 | 1e-175 | |
| 68160672 | 463 | glycosyl transferase family 1 protein [N | 0.925 | 0.775 | 0.793 | 1e-174 | |
| 356520284 | 456 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.969 | 0.824 | 0.765 | 1e-174 | |
| 147866333 | 717 | hypothetical protein VITISV_005430 [Viti | 0.981 | 0.531 | 0.724 | 1e-173 | |
| 356560288 | 460 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.920 | 0.776 | 0.784 | 1e-169 |
| >gi|224119626|ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/382 (78%), Positives = 346/382 (90%), Gaps = 1/382 (0%)
Query: 6 ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
++I++++T++L IL + S + N RR R +V FFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 7 LVIFSLLTSLLTFILTITSREIINGRRTRQRAVGFFHPYTNDGGGGERVLWCAVKAIQEE 66
Query: 65 SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
SPDLDC++YTGDHD+ +SL++RA+DRFGV+LL PPKVVHLY+RKWIEE++YPRFTMIGQ
Sbjct: 67 SPDLDCVIYTGDHDSSSESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQ 126
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRVR+
Sbjct: 127 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVRDR 186
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
SSMYNN+ASIA+S WLS CKI+YYT FSWMYG VGSCA LAMVNSSWTQSHIEKLW IP
Sbjct: 187 SSMYNNDASIARSGWLSWCKIIYYTLFSWMYGFVGSCAHLAMVNSSWTQSHIEKLWRIPS 246
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR 304
RIKRVYPPCDTSGLQVLPLER T P ISVAQFRPEKAHPLQLEAFS+A+R+LDAD+PR
Sbjct: 247 RIKRVYPPCDTSGLQVLPLERPTTTPIFISVAQFRPEKAHPLQLEAFSLAIRRLDADMPR 306
Query: 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364
P LQFVGSCRNK DE+RLQ L+DK++EL VDG+V+FYKN++YRDLV+LLGGAV G+HSM+
Sbjct: 307 PILQFVGSCRNKFDEDRLQKLQDKAVELNVDGDVQFYKNVMYRDLVRLLGGAVAGMHSMV 366
Query: 365 DEHFGISVVEYMAAGAIPIGKH 386
DEHFGISVVEYMAAGA+PI +
Sbjct: 367 DEHFGISVVEYMAAGAVPIAHN 388
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574810|ref|XP_002528312.1| glycosyl transferase, putative [Ricinus communis] gi|223532267|gb|EEF34070.1| glycosyl transferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/381 (78%), Positives = 334/381 (87%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+ I V TA+ + AS + N R NR +V FFHP TNDGGGGERVLWCAVKAIQEES
Sbjct: 7 LFIIPVFTAIFTLLSTFASQIINGRLNRKQAVGFFHPFTNDGGGGERVLWCAVKAIQEES 66
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P LDC++YTGDHDA P SL +RA DRFGV LL+PP VVHLY+RKW+EE++YPRFT+IGQS
Sbjct: 67 PHLDCVIYTGDHDASPQSLASRATDRFGVNLLYPPMVVHLYKRKWVEETSYPRFTVIGQS 126
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
FGS+YL+WEALCKF PLYYFDT GYAFTYPLARIFGC+VICYTHYPTISLDMISRVR+ S
Sbjct: 127 FGSIYLAWEALCKFPPLYYFDTCGYAFTYPLARIFGCKVICYTHYPTISLDMISRVRDRS 186
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
SMYNNNASIA+S WLS+CKI+YYTFFSWMYG VGSCA LA+VNSSWTQSHIEKLW IP+R
Sbjct: 187 SMYNNNASIARSGWLSRCKIIYYTFFSWMYGFVGSCAHLAIVNSSWTQSHIEKLWKIPNR 246
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTSGLQ LPLERS + P +SVAQFRPEKAH LQLEAF+VA+ KLDAD PRP
Sbjct: 247 IKRVYPPCDTSGLQALPLERSVDPPRFVSVAQFRPEKAHSLQLEAFAVAIGKLDADSPRP 306
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+LQFVGSCRN DEERLQ L+DK+IELKV+G+VEFYKN+LYRDLV LLGGA+VG+HSMID
Sbjct: 307 KLQFVGSCRNNFDEERLQKLQDKAIELKVNGDVEFYKNVLYRDLVSLLGGAIVGMHSMID 366
Query: 366 EHFGISVVEYMAAGAIPIGKH 386
EHFGI VVEYMAAGAIPI +
Sbjct: 367 EHFGICVVEYMAAGAIPIAHN 387
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448485|ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/382 (77%), Positives = 332/382 (86%), Gaps = 1/382 (0%)
Query: 6 ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
+++W +I+ +A IL S + R NR VAFFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 5 VVVWCLISGAVALILSYISLSIVKGRSNRRHGVAFFHPYTNDGGGGERVLWCAVKAIQEE 64
Query: 65 SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
S DLDC++YTGDHDA PDSL+ARAV RFGVELL+PPKVVHLY+RKWIEE+ YPRFTMIGQ
Sbjct: 65 SSDLDCVIYTGDHDASPDSLMARAVQRFGVELLYPPKVVHLYKRKWIEETMYPRFTMIGQ 124
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
S GSVYLSWEALCK+TPLYY DTSGYAF YP+AR+FGC+VICYTHYPTISLDMISRV++
Sbjct: 125 SLGSVYLSWEALCKYTPLYYIDTSGYAFAYPVARLFGCKVICYTHYPTISLDMISRVQDQ 184
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+SMYNN+A IA+S WLS CK++YY F WMYG VGS A LAMVNSSWTQSHIE LW IP+
Sbjct: 185 NSMYNNDALIAKSTWLSLCKVIYYRLFGWMYGTVGSFAHLAMVNSSWTQSHIESLWRIPE 244
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR 304
R KRVYPPCDTSGLQ LPLER PAIISVAQFRPEKAH LQL AFSVA+R LDADLPR
Sbjct: 245 RTKRVYPPCDTSGLQALPLERLRSSPAIISVAQFRPEKAHTLQLMAFSVAIRNLDADLPR 304
Query: 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364
P+LQFVGSCRNKSDEERLQ+LKDK+I+LK++G+VEF+KN++YRDLV LLGGAV GIH MI
Sbjct: 305 PKLQFVGSCRNKSDEERLQNLKDKAIQLKLEGDVEFHKNVMYRDLVGLLGGAVAGIHGMI 364
Query: 365 DEHFGISVVEYMAAGAIPIGKH 386
DEHFGISVVEYMAAGAIPI +
Sbjct: 365 DEHFGISVVEYMAAGAIPIANN 386
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460937|ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] gi|449507809|ref|XP_004163134.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/379 (78%), Positives = 333/379 (87%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+L WA IT +LA I +A + N RRNR +V FFHP TNDGGGGERVLWCAVKAIQ+E+
Sbjct: 5 LLFWAFITLLLALIRRIAWAILNGRRNRKPAVGFFHPYTNDGGGGERVLWCAVKAIQDEN 64
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+LDC+++TGDHDA P+SL+ARAVDRFGV+L PPKVVHL++RKWIEE+TYPRFTMIGQS
Sbjct: 65 PNLDCLIFTGDHDASPESLMARAVDRFGVKLHFPPKVVHLHKRKWIEETTYPRFTMIGQS 124
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
GS+YLSWEALC+FTPLYYFDTSGYAFTYP+AR+FGC V+CYTHYPTISLDM+SRVR S
Sbjct: 125 LGSIYLSWEALCRFTPLYYFDTSGYAFTYPIARLFGCIVVCYTHYPTISLDMLSRVRGRS 184
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
SMYNNNA IA+S+WLSQCKI+YY FSWMYG VGS LAMVNSSWTQSHI+ LW IPDR
Sbjct: 185 SMYNNNALIAKSSWLSQCKIIYYVLFSWMYGFVGSFTQLAMVNSSWTQSHIKSLWKIPDR 244
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTS LQ LPLERS + P IISVAQFRPEKAH LQLEAF+VA++KLDA RP
Sbjct: 245 IKRVYPPCDTSVLQALPLERSCKTPIIISVAQFRPEKAHLLQLEAFAVAIKKLDASSVRP 304
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+LQFVGSCRNKSDEERLQ LK+K+IELKVD +VEF+KNL+YRDLV LL GAV GIHSM D
Sbjct: 305 KLQFVGSCRNKSDEERLQILKNKAIELKVDEHVEFHKNLMYRDLVGLLRGAVAGIHSMTD 364
Query: 366 EHFGISVVEYMAAGAIPIG 384
EHFGISVVEYMAAGAIPI
Sbjct: 365 EHFGISVVEYMAAGAIPIA 383
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42569790|ref|NP_181548.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|347662497|sp|Q9XEE9.2|ALG11_ARATH RecName: Full=GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG11; AltName: Full=Asparagine-linked glycosylation protein 11; AltName: Full=Protein LEAF WILTING 3 gi|330254700|gb|AEC09794.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/384 (76%), Positives = 332/384 (86%), Gaps = 1/384 (0%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
MA Y IL + ++T + A L L V NAR++R +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59
Query: 61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
IQEE+PDLDC+++TGDHD+ DSL RAVDRFGV L PPKV+HL +RKWIEESTYP FT
Sbjct: 60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119
Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
MIGQS GSVYL+WEAL FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179
Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
VR+ +SMYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239
Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
IP+RI RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299
Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360
D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR+LV+LLG AV G+
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLGNAVAGL 359
Query: 361 HSMIDEHFGISVVEYMAAGAIPIG 384
H MIDEHFGISVVEYMAAGAIPI
Sbjct: 360 HGMIDEHFGISVVEYMAAGAIPIA 383
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297789912|ref|XP_002862877.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297308639|gb|EFH39136.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust.
Identities = 285/378 (75%), Positives = 329/378 (87%)
Query: 7 LIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESP 66
+++ ++T + A L L+ V NAR++R +V FFHP TNDGGGGERVLWCAVKAIQEE+P
Sbjct: 6 ILYTLLTIIFAVSLSLSLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKAIQEENP 65
Query: 67 DLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126
DLDC+++TGDHD+ DSL RAVDRFGV L PPKV++L +RKWIEE TYP FTMIGQS
Sbjct: 66 DLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIYLSKRKWIEERTYPHFTMIGQSL 125
Query: 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSS 186
GSVYL+WEAL KFTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISRVR+ +S
Sbjct: 126 GSVYLAWEALRKFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISRVRQRNS 185
Query: 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRI 246
MYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW IP+RI
Sbjct: 186 MYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLWRIPERI 245
Query: 247 KRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR 306
RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLE F++AL KLDAD+PRP+
Sbjct: 246 TRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEIFALALEKLDADVPRPK 305
Query: 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366
LQFVGSCRN SDEERLQ LKD+++ELKVDG+VEFYKN +YR+LV+LLG AV G+H MIDE
Sbjct: 306 LQFVGSCRNNSDEERLQKLKDRAVELKVDGDVEFYKNAMYRELVELLGNAVAGMHGMIDE 365
Query: 367 HFGISVVEYMAAGAIPIG 384
HFGISVVEYMAAGAIPI
Sbjct: 366 HFGISVVEYMAAGAIPIA 383
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|68160672|gb|AAY86782.1| glycosyl transferase family 1 protein [Noccaea caerulescens] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 285/359 (79%), Positives = 319/359 (88%)
Query: 26 VHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLL 85
V NAR+ R +V FFHP TNDGGGGERVLWCAVKAIQEE+PDLDC+V+TGDHD+ DSL
Sbjct: 25 VINARKCRKRAVGFFHPYTNDGGGGERVLWCAVKAIQEETPDLDCVVFTGDHDSSSDSLA 84
Query: 86 ARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYF 145
RAVDRFGV LL PPKV+HL +RKWIEE TYP FTMIGQS GSVYL+WEAL KFTPLY+
Sbjct: 85 RRAVDRFGVHLLFPPKVIHLNKRKWIEERTYPHFTMIGQSLGSVYLAWEALRKFTPLYFL 144
Query: 146 DTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205
DTSGYAFTYPLAR+FGC+V+CYTHYPTISLDMISRVR+ +SMYNN+ASIA+SNWLS CKI
Sbjct: 145 DTSGYAFTYPLARLFGCKVVCYTHYPTISLDMISRVRQRNSMYNNDASIAKSNWLSTCKI 204
Query: 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER 265
VYY FSW+YG+VGSC +LAMVNSSWT+SHIE LW IP+R +RVYPPCDTSGLQ LPLER
Sbjct: 205 VYYRAFSWLYGMVGSCTNLAMVNSSWTKSHIEVLWRIPERTRRVYPPCDTSGLQALPLER 264
Query: 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSL 325
S++ P ISVAQFRPEKAH LQLEAFS+AL KLDAD PRP+LQFVGSCRN+SDEERLQ L
Sbjct: 265 SSDPPIFISVAQFRPEKAHMLQLEAFSLALEKLDADFPRPKLQFVGSCRNESDEERLQKL 324
Query: 326 KDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384
KD+++ELKVDG+VEFYKN +YR+LV LLG AV GIH MIDEHFGISVVEYMAAGAIPI
Sbjct: 325 KDRAVELKVDGDVEFYKNAMYRELVALLGNAVAGIHGMIDEHFGISVVEYMAAGAIPIA 383
|
Source: Noccaea caerulescens Species: Noccaea caerulescens Genus: Noccaea Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520284|ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/379 (76%), Positives = 327/379 (86%), Gaps = 3/379 (0%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
++I A+ITA+LA + I N RR R +VAFFHP TNDGGGGERVLWCAV+ IQEES
Sbjct: 1 MIITALITAILAGLCIGPI---NGRRRRKRAVAFFHPYTNDGGGGERVLWCAVRGIQEES 57
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
PDLDC VYTGDHDA P SL+ARA+DRFGV LL PPKVVHLY+RKWIEE+TYP FTMIGQS
Sbjct: 58 PDLDCYVYTGDHDATPQSLMARALDRFGVALLSPPKVVHLYKRKWIEETTYPHFTMIGQS 117
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
GSVYL+WEALCKFTP+YYFDTSGYAFTYPLAR+FGC+VICYTHYPTIS DM++RVR+ S
Sbjct: 118 LGSVYLAWEALCKFTPIYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQRS 177
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
MYNN+A I +S WLS+CKIVYYT FS +YG VGSCA LAMVNSSWT+SHIE LW PDR
Sbjct: 178 FMYNNDALITKSVWLSRCKIVYYTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDR 237
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTSGLQVLPLERS E P +ISVAQFRPEKAH LQLEAFS A+++LD LP+P
Sbjct: 238 IKRVYPPCDTSGLQVLPLERSAEIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPSLPKP 297
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+ Q VGSCRNKSDE+RLQ LK+K+IEL V+ ++EF+KN+ YRDLV LLGGAV GIHSM D
Sbjct: 298 KFQIVGSCRNKSDEDRLQMLKEKAIELNVNEHMEFHKNVTYRDLVGLLGGAVAGIHSMTD 357
Query: 366 EHFGISVVEYMAAGAIPIG 384
EHFGISVVEYMAAGAIPI
Sbjct: 358 EHFGISVVEYMAAGAIPIA 376
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147866333|emb|CAN79918.1| hypothetical protein VITISV_005430 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/406 (72%), Positives = 331/406 (81%), Gaps = 25/406 (6%)
Query: 6 ILIWAVIT-AVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
+++W +I+ AV + ++ + R NR VAFFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 5 VVVWCLISGAVALILSXISLSIXKGRSNRRHGVAFFHPYTNDGGGGERVLWCAVKAIQEE 64
Query: 65 SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
S DLDC+ YTGDHDA PDSL+ARAV RFGVELL+PPKVVHLY+RKWIEE+ YPRFTMIGQ
Sbjct: 65 SSDLDCVXYTGDHDASPDSLMARAVQRFGVELLYPPKVVHLYKRKWIEETMYPRFTMIGQ 124
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
S GSVYLSWEALCK+TPLYY DTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRV++
Sbjct: 125 SLGSVYLSWEALCKYTPLYYIDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVQDQ 184
Query: 185 SSMYNNNASIAQ---------------------SNWLSQCKIVYYTFFSWMYGLVGSCAD 223
+SMYNN+A IA+ S WLS CK+ YY F WMYG VGS A
Sbjct: 185 NSMYNNDALIAKRHLVVYSSCLNVESHNFFNHGSTWLSLCKVXYYRLFGWMYGTVGSFAH 244
Query: 224 LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL---QVLPLERSTEYPAIISVAQFRP 280
LAMVNSSWTQSHIE LW IP+R KRVYPPCDTSGL Q LPLER PAIISVAQFRP
Sbjct: 245 LAMVNSSWTQSHIESLWRIPERTKRVYPPCDTSGLQFKQALPLERXRSSPAIISVAQFRP 304
Query: 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340
EKAH LQL AFSVA+R LDADLPRP+LQFVGSCRNKSDEERLQ+LKDK+I+LK++G+VEF
Sbjct: 305 EKAHTLQLMAFSVAIRNLDADLPRPKLQFVGSCRNKSDEERLQNLKDKAIQLKLEGDVEF 364
Query: 341 YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386
+KN++YRDLV LLGGAV GIH MIDEHFGISVVEYMAAGAIPI +
Sbjct: 365 HKNVMYRDLVGLLGGAVAGIHGMIDEHFGISVVEYMAAGAIPIANN 410
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356560288|ref|XP_003548425.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/357 (78%), Positives = 311/357 (87%)
Query: 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87
N RR R +V FFHP TNDGGGGERVLWCAV+ IQEESPDLDC VYTGDHDA P SL+AR
Sbjct: 24 NGRRRRKRAVGFFHPYTNDGGGGERVLWCAVRGIQEESPDLDCYVYTGDHDATPQSLMAR 83
Query: 88 AVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDT 147
A+DRFGV LL PKVV LY+RKWIEE+TYP FTMIGQS GSVYL+WEALCKFTP+YYFDT
Sbjct: 84 ALDRFGVTLLSSPKVVLLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTPMYYFDT 143
Query: 148 SGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207
SGYAFTYPLAR+FGC+VICYTHYPTIS DM++RVR+ S MYNN+A I +S WLS+CKIVY
Sbjct: 144 SGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQHSFMYNNDALITKSVWLSRCKIVY 203
Query: 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERST 267
YT FS +YG VGSCA LAMVNSSWT+SHIE LW PDRIKRVYPPCDTSGLQVLPLERS
Sbjct: 204 YTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDRIKRVYPPCDTSGLQVLPLERSA 263
Query: 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD 327
E P +ISVAQFRPEKAH LQLEAFS A+++LD LP+P+ Q VGSCRNKSDE+RLQ LK+
Sbjct: 264 EIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPTLPKPKFQIVGSCRNKSDEDRLQMLKE 323
Query: 328 KSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384
K+IEL V+ +VEF+KN+ YRDLV LLGGAV GIHSM DEHFGISVVEYMAAGAIPI
Sbjct: 324 KAIELNVNEHVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIA 380
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 388 | ||||||
| TAIR|locus:2065080 | 463 | LEW3 "LEAF WILTING 3" [Arabido | 0.984 | 0.825 | 0.762 | 1.5e-161 | |
| UNIPROTKB|E1BUY5 | 491 | ALG11 "Uncharacterized protein | 0.894 | 0.706 | 0.501 | 1.7e-89 | |
| UNIPROTKB|E1B756 | 500 | ALG11 "Uncharacterized protein | 0.902 | 0.7 | 0.481 | 4.7e-87 | |
| UNIPROTKB|E2RR35 | 667 | ALG11 "Uncharacterized protein | 0.961 | 0.559 | 0.460 | 6e-87 | |
| FB|FBgn0037108 | 475 | CG11306 [Drosophila melanogast | 0.966 | 0.789 | 0.463 | 3.3e-86 | |
| UNIPROTKB|F1RMC7 | 492 | ALG11 "Uncharacterized protein | 0.961 | 0.758 | 0.463 | 5.4e-86 | |
| RGD|1564725 | 492 | Alg11 "ALG11, alpha-1,2-mannos | 0.971 | 0.766 | 0.446 | 2.4e-85 | |
| UNIPROTKB|Q2TAA5 | 492 | ALG11 "GDP-Man:Man(3)GlcNAc(2) | 0.961 | 0.758 | 0.457 | 3e-85 | |
| MGI|MGI:2142632 | 492 | Alg11 "asparagine-linked glyco | 0.971 | 0.766 | 0.443 | 3.8e-85 | |
| DICTYBASE|DDB_G0292118 | 505 | alg11 "alpha-1,2-mannosyltrans | 0.979 | 0.752 | 0.433 | 2.5e-81 |
| TAIR|locus:2065080 LEW3 "LEAF WILTING 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
Identities = 292/383 (76%), Positives = 332/383 (86%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
MA Y IL + ++T + A L L V NAR++R +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59
Query: 61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
IQEE+PDLDC+++TGDHD+ DSL RAVDRFGV L PPKV+HL +RKWIEESTYP FT
Sbjct: 60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119
Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
MIGQS GSVYL+WEAL FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179
Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
VR+ +SMYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239
Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
IP+RI RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299
Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360
D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR+LV+LLG AV G+
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLGNAVAGL 359
Query: 361 HSMIDEHFGISVVEYMAAGAIPI 383
H MIDEHFGISVVEYMAAGAIPI
Sbjct: 360 HGMIDEHFGISVVEYMAAGAIPI 382
|
|
| UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 178/355 (50%), Positives = 232/355 (65%)
Query: 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRF 92
R VAFFHP N GGGGERVLWCA++ +Q++ ++ C+VYTGD DA + ++ A RF
Sbjct: 60 RPLLVAFFHPYCNAGGGGERVLWCAIRTLQKKYKNVTCVVYTGDRDATEEDIIEGAFRRF 119
Query: 93 GVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAF 152
++L HP K V L +R +E S YP FT++GQS GSV+L WEAL K P Y D+ GYAF
Sbjct: 120 NIKLTHPVKFVFLEKRYLVEASLYPHFTLLGQSLGSVFLGWEALLKCVPDIYIDSMGYAF 179
Query: 153 TYPLARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211
T PL + G CRV CY HYPTIS DM+S VR + +NN A I + S+ K+VYY F
Sbjct: 180 TLPLFKYLGGCRVGCYVHYPTISTDMLSVVRNQDTRFNNAAFITNNPLFSKFKLVYYYLF 239
Query: 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---STE 268
++MYGLVGSC+D+ MVNSSWT +HI LW VYPPCD +PLE S E
Sbjct: 240 AFMYGLVGSCSDVVMVNSSWTLNHILSLWRAGPCTSVVYPPCDVQTFLDIPLEEEKNSAE 299
Query: 269 YPAIISVAQFRPEKAHPLQLEAFSVALR--KLDADLPRPRLQFVGSCRNKSDEERLQSLK 326
Y +I+S++QFRPEK HPLQ+ AF+ L+ +L L +L +G CRN+ DE+R+ +LK
Sbjct: 300 Y-SIVSISQFRPEKDHPLQIRAFAKLLKEKRLRQQLSL-KLILIGGCRNQQDEDRVNNLK 357
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
EL V NV F N+ + +L K L A +G+H+M +EHFGI VVE MAAG +
Sbjct: 358 SLCEELGVSNNVMFRINIPFEELKKHLAEATIGLHTMWNEHFGIGVVECMAAGTV 412
|
|
| UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 171/355 (48%), Positives = 235/355 (66%)
Query: 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD 90
+N+T +AFFHP N GGGGERVLWCA++A+Q++ P+ +VYTGD D +L A
Sbjct: 61 KNQTV-IAFFHPYCNAGGGGERVLWCALRALQKKYPEALYVVYTGDADVSGQQILEGAFR 119
Query: 91 RFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGY 150
RF + L P K V L +R +E+S YP FT++GQS GS++L WEAL + P Y D+ GY
Sbjct: 120 RFNIRLTRPVKFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGY 179
Query: 151 AFTYPLARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT 209
AFT PL + G CRV Y HYPTIS DM+S V+ + +NN A I ++ +LS+ K++YY
Sbjct: 180 AFTLPLFKYLGGCRVGSYVHYPTISTDMLSVVKNQNVGFNNAAFITRNPFLSKVKLIYYY 239
Query: 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--ERST 267
F++MYGLVGSC+D+ MVNSSWT +HI LW + + VYPPCD LPL E++T
Sbjct: 240 LFAFMYGLVGSCSDIVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDLPLHEEKAT 299
Query: 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDAD-LPRPRLQFVGSCRNKSDEERLQSLK 326
++S+ QFRPEK HPLQ+ AF+ L K +++ LP +L +G CRN+ DE R+ L+
Sbjct: 300 SEHLLVSIGQFRPEKNHPLQIRAFAKLLNKKESESLPPLKLVLIGGCRNQDDELRVNQLR 359
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
+ +L V +VEF N+ + +L L A VG+H+M +EHFGI +VE MAAG I
Sbjct: 360 RLAEDLGVQEDVEFKINIPFDELKNYLSEATVGLHTMWNEHFGIGIVECMAAGMI 414
|
|
| UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 175/380 (46%), Positives = 241/380 (63%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+++W I +L S N ++ T VAFFHP N GGGGERVLWCA++A+Q++
Sbjct: 212 VILWG-IRLLLQKKKESVSTSKNGKKQ--TVVAFFHPYCNAGGGGERVLWCALRALQKKY 268
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD D +L A RF ++L HP K V L +R +E+S YP FT++GQS
Sbjct: 269 PEAVYVVYTGDVDVSGQQILEGAFQRFNIKLTHPVKFVFLRKRYLVEDSLYPHFTLLGQS 328
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + G C V Y HYPTIS DM+S V+
Sbjct: 329 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYLGGCHVGSYVHYPTISTDMLSVVKNQ 388
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 389 NVGFNNAAFITRNPFLSKLKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 448
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVALRKLDAD- 301
VYPPCD +PL P ++SV QFRPEK HPLQ++AF+ L K A+
Sbjct: 449 CTNIVYPPCDVQTFLDIPLREKKTTPGHLLVSVGQFRPEKNHPLQIKAFAKLLNKKVAEP 508
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
LP +L +G CRN+ DE R+ L+ S +L + +VEF N+ + +L L A +G+H
Sbjct: 509 LPSLKLVLIGGCRNQDDELRVNQLRRLSEDLGIQEDVEFKINIPFDELKHYLSEATIGLH 568
Query: 362 SMIDEHFGISVVEYMAAGAI 381
+M +EHFGI VVE MAAG I
Sbjct: 569 TMWNEHFGIGVVECMAAGTI 588
|
|
| FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 182/393 (46%), Positives = 252/393 (64%)
Query: 7 LIWAVITAVLASIL--ILASHVHNARRNR--TTS-----VAFFHPNTNDGGGGERVLWCA 57
L+W +++ VL ++L + R+N+ T+S V FHP N GGGGERVLWCA
Sbjct: 7 LLWLLLSLVLVAVLSFLFLRQWLLGRKNKLHTSSENGINVGIFHPYCNAGGGGERVLWCA 66
Query: 58 VKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL-LHPPKVVHLYRRKWIEESTY 116
V+A+QE+ + ++YTGD DA P+S+L +A + F + + K V L +R WIE Y
Sbjct: 67 VRALQEKYQNARMVIYTGDIDASPNSILQKAKNVFNIAVDSDNVKFVFLKQRHWIEAKNY 126
Query: 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISL 175
P FT++GQS GS+ + EALC+F P Y DT GYAFTYPL R +V CY HYP IS
Sbjct: 127 PHFTLLGQSIGSMVVGLEALCRFPPDIYIDTMGYAFTYPLFRYLAQSKVGCYVHYPVIST 186
Query: 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSH 235
DM+ RV++ +NN +A++ +L+ K+ YY FS MY VG CA+ MVNSSWT++H
Sbjct: 187 DMLKRVQQRQMSHNNKKYVARNPFLTWTKLAYYRLFSRMYKWVGCCAETIMVNSSWTENH 246
Query: 236 IEKLWGIPDRIKRVYPPCDTSGLQVLP-LERSTEYPAIISVAQFRPEKAHPLQLEAFSVA 294
I +LW +P + RVYPPC+ S L+ L E+ E+ I+SV QFRPEK HPLQL+A
Sbjct: 247 ILQLWDVPFKTHRVYPPCEVSHLKSLQHTEKGDEF-IILSVGQFRPEKDHPLQLQAI-YE 304
Query: 295 LRKL----DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLV 350
LR L +A + +L VGSCRN+ D ERL++++D + L ++ NV+F N+ Y DL+
Sbjct: 305 LRTLLAQDEALWNQIKLVIVGSCRNEDDYERLKNMQDLTKHLSLENNVQFSVNVPYEDLL 364
Query: 351 KLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
KL A +GIH+M +EHFGI +VE MAAG I +
Sbjct: 365 KLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMV 397
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| UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 176/380 (46%), Positives = 238/380 (62%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L LAS + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLRQKKKLASTSKTGKSQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD D +L A RF + L HP K + L +R +E S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDADVSGQQILDGAFRRFNIRLTHPVKFLFLRKRYLVEASLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + G CRV Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDIYIDSMGYAFTLPLFKYLGGCRVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+NN A I ++ +LSQ K++YY F+ +YGLVGSC+D+ MVNSSWT +HI LW D
Sbjct: 214 HVGFNNAAFITRNPFLSQVKLIYYHLFACVYGLVGSCSDVVMVNSSWTLNHILSLWKAGD 273
Query: 245 RIKRVYPPCDTSGLQVLPLE--RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADL 302
R VYPPCD +PL+ ++T ++S+ QFRPEK HPLQ+ AF+ L K +A
Sbjct: 274 RTHVVYPPCDVQTFLDIPLQDKKTTSGHMLVSIGQFRPEKNHPLQIRAFAKLLSKKEAAS 333
Query: 303 PRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L +G CRN+ DE R+ L+ S +L V +VEF N+ + +L L A +G+H
Sbjct: 334 LLPLKLVLIGGCRNQDDELRVNQLRRLSEDLGVHKDVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAI 381
+M +EHFGI +VE MAAG I
Sbjct: 394 TMWNEHFGIGIVECMAAGTI 413
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| RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 174/390 (44%), Positives = 243/390 (62%)
Query: 5 GILIWAVITAVLA-SILILASHVHNARRNRTTS--------VAFFHPNTNDGGGGERVLW 55
G++I V+ L + ++ H+ +++ +TS VAFFHP N GGGGERVLW
Sbjct: 24 GLIICGVLCVYLVIGLWVIRRHLQRKKKSASTSKNGKDQMVVAFFHPYCNAGGGGERVLW 83
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q++ PD +VYTGD +L A RF ++L+HP + V L +R +E+S
Sbjct: 84 CALRALQKKYPDAVYVVYTGDIHVSGQQILEGAFRRFNIKLVHPVQFVFLRKRYLVEDSR 143
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS+ L WEAL + P Y D+ GYAFT PL + + GCRV Y HYPTIS
Sbjct: 144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTIS 203
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S V+ + +NN A I+++ LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +
Sbjct: 204 TDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLN 263
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFS 292
HI LW + VYPPCD +PL P ++S+ QFRPEK H LQ++AF+
Sbjct: 264 HILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRPEKNHALQIKAFA 323
Query: 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351
L + A+ +L +G CRNK DE R+ L+ S L V NVEF N+ + +L
Sbjct: 324 KLLNEKAAESRHSLKLVLIGGCRNKDDEFRVNQLRRLSENLGVQENVEFKINISFDELKN 383
Query: 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
L A +G+H+M +EHFGI VVE MAAG I
Sbjct: 384 YLSEATIGLHTMWNEHFGIGVVECMAAGTI 413
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| UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 174/380 (45%), Positives = 239/380 (62%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L L S N + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLQRKKKLVSTSKNGKNQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD + +L A RF + L+HP + V L +R +E+S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + I GC+V Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 214 NIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 273
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVAL-RKLDAD 301
VYPPCD +PL P ++SV QFRPEK HPLQ+ AF+ L +K+
Sbjct: 274 CTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVES 333
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L +G CRNK DE R+ L+ S +L V VEF N+ + +L L A +G+H
Sbjct: 334 PPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAI 381
+M +EHFGI VVE MAAG I
Sbjct: 394 TMWNEHFGIGVVECMAAGTI 413
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| MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 173/390 (44%), Positives = 244/390 (62%)
Query: 5 GILIWAVITAVLA-SILILASHVHNARRNRTTS--------VAFFHPNTNDGGGGERVLW 55
G++I V+ L + ++ H+ +++ +TS VAFFHP N GGGGERVLW
Sbjct: 24 GLMICGVLCVYLVIGLWVIRWHLQRKKKSVSTSKNGKEQTVVAFFHPYCNAGGGGERVLW 83
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q++ P+ +VYTGD + +L A RF ++L HP + V L +R +E+S
Sbjct: 84 CALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRFNIKLAHPVQFVFLRKRYLVEDSR 143
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS+ L WEAL + P Y D+ GYAFT PL + + GCRV Y HYPTIS
Sbjct: 144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTIS 203
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S V+ + +NN A I+++ LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +
Sbjct: 204 TDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLN 263
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFS 292
HI LW + VYPPCD +PL P ++S+ QFRPEK H LQ++AF+
Sbjct: 264 HILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRPEKNHALQIKAFA 323
Query: 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351
L + A+L +L +G CRNK DE R+ L+ S L V NVEF N+ + +L
Sbjct: 324 KLLNEKAAELGHSLKLVLIGGCRNKDDEFRVNQLRSLSENLGVQENVEFKINISFDELKN 383
Query: 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
L A +G+H+M +EHFGI VVE MAAG +
Sbjct: 384 YLSEATIGLHTMWNEHFGIGVVECMAAGTV 413
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| DICTYBASE|DDB_G0292118 alg11 "alpha-1,2-mannosyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 169/390 (43%), Positives = 239/390 (61%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+L+ +I ++A ++ L + + S+ FFHP GGGGERVLWCA+K+IQEE
Sbjct: 33 VLVVPLIICIIALLIALRIKYGSKKDLSEVSIGFFHPYCTAGGGGERVLWCAIKSIQEEY 92
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPP-KVVHLYRRKWIEESTYPRFTMIGQ 124
P + C+VYTGD ++ D + + F +EL + + L +RKW+E STYPRFT+IGQ
Sbjct: 93 PYVRCVVYTGDKES-DDEIFNKVKKTFDIELGRDNLEFIRLKKRKWVEASTYPRFTLIGQ 151
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIFGCRVICYTHYPTISLDMISRVRE 183
S GS+ L WEAL KF P + D+ GYAFT+P+ + I G V CY HYPTIS DMIS V+
Sbjct: 152 SLGSMILGWEALTKFVPTIFLDSMGYAFTFPIFSLIGGSTVACYVHYPTISSDMISSVKS 211
Query: 184 GSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWG-- 241
S +NN+ SI+ + + + K++YY FS +Y +VGS + L MVN +WT +HI +W
Sbjct: 212 SSYSFNNDVSISSNKFKTISKLIYYNIFSKIYQIVGSFSKLVMVNGTWTGNHIRDIWKKQ 271
Query: 242 IPDRIKRVYPPCDTSGLQVLPLE--RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLD 299
+ VYPP D G + L L T I+S+AQFRPEK H LQL + L K
Sbjct: 272 FGYDLFIVYPPVDVKGRKQLKLGWMDGTRKNMILSIAQFRPEKNHQLQLRTLAHLLEKYP 331
Query: 300 ADLPRP---RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA 356
+ +P +L VG R+++D +R++ L++ S EL ++ +VEF + L +LL A
Sbjct: 332 SHREQPLNTKLVLVGGVRDQADRDRVEQLRNLSKELNIEDHVEFQIGISSDQLNQLLSEA 391
Query: 357 VVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386
VGIH+M +EHFGI VVE MAAG IP+ +
Sbjct: 392 SVGIHTMYNEHFGIGVVELMAAGVIPVANN 421
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9XEE9 | ALG11_ARATH | 2, ., 4, ., 1, ., 1, 3, 1 | 0.7604 | 0.9871 | 0.8272 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00120888 | transferase, transferring glycosyl groups (466 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_Genewise1_v1.C_LG_XIV2606 | SubName- Full=Putative uncharacterized protein; (424 aa) | • | • | • | 0.956 | |||||
 | eugene3.00110811 | hypothetical protein (413 aa) | • | • | • | • | 0.942 | ||||
 | eugene3.01460030 | transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa) | • | • | • | 0.494 | |||||
 | gw1.XIV.1495.1 | hypothetical protein (284 aa) | • | 0.403 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 388 | |||
| PLN02949 | 463 | PLN02949, PLN02949, transferase, transferring glyc | 0.0 | |
| cd03806 | 419 | cd03806, GT1_ALG11_like, This family is most close | 0.0 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-15 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 4e-14 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 4e-14 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 1e-11 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 8e-10 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 5e-09 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 7e-09 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 7e-07 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 3e-06 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 4e-06 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-05 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 0.003 |
| >gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 736 bits (1901), Expect = 0.0
Identities = 292/378 (77%), Positives = 337/378 (89%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
++++ ++T+++ ++ +A V ARR+R +V FFHP TNDGGGGERVLWCAV+AIQEE+
Sbjct: 5 LILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEEN 64
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
PDLDC++YTGDHDA PDSL ARA DRFGVELL PPKVVHL +RKWIEE TYPRFTMIGQS
Sbjct: 65 PDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQS 124
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
GSVYL+WEALCKFTPLY+FDTSGYAFTYPLAR+FGC+V+CYTHYPTIS DMISRVR+ S
Sbjct: 125 LGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRS 184
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
SMYNN+ASIA+S WLS CKI+YY F+WMYGLVG CA LAMVNSSWT+SHIE LW IP+R
Sbjct: 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPER 244
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTSGLQ LPLERS + P IISVAQFRPEKAH LQLEAF++AL KLDAD+PRP
Sbjct: 245 IKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRP 304
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+LQFVGSCRNK DEERLQ LKD++ EL +DG+VEF+KN+ YRDLV+LLGGAV G+HSMID
Sbjct: 305 KLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMID 364
Query: 366 EHFGISVVEYMAAGAIPI 383
EHFGISVVEYMAAGA+PI
Sbjct: 365 EHFGISVVEYMAAGAVPI 382
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Length = 463 |
| >gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 515 bits (1328), Expect = 0.0
Identities = 177/351 (50%), Positives = 238/351 (67%), Gaps = 3/351 (0%)
Query: 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL 96
V FFHP N GGGGERVLWCAV+A+Q+ P+ ++YTGD DA P+ +L + RF +EL
Sbjct: 3 VGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIEL 62
Query: 97 LHPPKVVHLYR-RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP 155
P V L + RK +E STYPRFT++GQ+ GS+ L EAL K P + DT GY FTYP
Sbjct: 63 DRPRIVFFLLKYRKLVEASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYP 122
Query: 156 LARIF-GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214
L R+ GC V Y HYPTIS DM+ +VR + YNN+A+IA+S LS+ K++YY F+++
Sbjct: 123 LVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182
Query: 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274
YGL GS AD+ MVNS+WT++HI LW + VYPPCD L LPL+ T I+S
Sbjct: 183 YGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQILS 242
Query: 275 VAQFRPEKAHPLQLEAFSVALRKL-DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK 333
+AQFRPEK HPLQL AF+ L++L + + +L +GSCRN+ DE+R++ LK + EL
Sbjct: 243 IAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELG 302
Query: 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384
++ VEF N + +L++ L A +G+H+M +EHFGI VVEYMAAG IP+
Sbjct: 303 LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLA 353
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ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. Length = 419 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 3e-15
Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 17/180 (9%)
Query: 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLER 265
+ AD + S T+ + +L G+P ++I + DT + P
Sbjct: 130 LLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAA 189
Query: 266 STEYPA------IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE 319
I+ V + P K L LEA KL + P RL VG D
Sbjct: 190 RRRLGIPEDEPVILFVGRLVPRKGVDLLLEAL----AKLRKEYPDVRLVIVG------DG 239
Query: 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
+ L+ + EL + V F + DL L A V + + E FG+ ++E MAAG
Sbjct: 240 PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAG 299
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Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 4e-14
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I+ V + PEK L LEAF L P +L VG D E + LK +++
Sbjct: 5 ILFVGRLVPEKGLDLLLEAF----ALLKEQHPNLKLVIVG------DGEEEKKLKKLALK 54
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
L ++ NV F + DL++L A + + E FG+ ++E MAAG I
Sbjct: 55 LGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVI 106
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Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 72.7 bits (177), Expect = 4e-14
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER 265
+ + + AD + S + +E L G+P++I + DT +
Sbjct: 135 LLRLLLKRLKKALRLLADRVIAVSPALKELLEAL-GVPNKIVVIPNGIDTEKFAPARIGL 193
Query: 266 STEYPA--IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQ 323
E ++ V + PEK L +EA KL P +L VG ER +
Sbjct: 194 LPEGGKFVVLYVGRLDPEKGLDLLIEAA----AKLKKRGPDIKLVIVGD-----GPERRE 244
Query: 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
L+ + +L ++ NV+F + +L +LL A V + + E FG+ ++E MAAG
Sbjct: 245 ELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300
|
Length = 381 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 1e-11
Identities = 92/368 (25%), Positives = 143/368 (38%), Gaps = 70/368 (19%)
Query: 36 SVAFFHPNTND-G-GGGERVLWCAVKAIQEESPDLDCIVYTGDHD---AFPDSLLARAVD 90
VAF HP D G GG ER++ A A+Q + +YT HD F + D
Sbjct: 2 RVAFIHP---DLGIGGAERLVVDAALALQSR--GHEVTIYTSHHDPSHCFEE-----TKD 51
Query: 91 -RFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLY-YFDTS 148
V + R W+ S + RF ++ +YL+ L Y F
Sbjct: 52 GTLPVRV----------RGDWLPRSIFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVD 101
Query: 149 GYAFTYPLARIF-GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207
+ PL ++F +++ Y H+P D + R L K +Y
Sbjct: 102 QVSACVPLLKLFSPSKILFYCHFP----DQLLAQRGS--------------LL---KRLY 140
Query: 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GIPDRIKRV-YPPCDTS-------GL 258
F W+ AD +VNS++T S +K + + + V YP DT
Sbjct: 141 RKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP 200
Query: 259 QVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD 318
L + +S+ +F +K L +EAF+ L+ A+ RL G +
Sbjct: 201 DPGLLIPKSGKKTFLSINRFERKKNIALAIEAFA-ILKDKLAEFKNVRLVIAGGYDPRVA 259
Query: 319 E-----ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK--LLGGAVVGIHSMIDEHFGIS 371
E E LQ L ++ L ++ V F ++ D K LL A +++ +EHFGI
Sbjct: 260 ENVEYLEELQRLAEE--LLLLEDQVIFLPSI--SDSQKELLLSSARALLYTPSNEHFGIV 315
Query: 372 VVEYMAAG 379
+E M AG
Sbjct: 316 PLEAMYAG 323
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 8e-10
Identities = 67/341 (19%), Positives = 103/341 (30%), Gaps = 64/341 (18%)
Query: 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY 106
G R ++A+ + P+ ++ G L A + ++ L
Sbjct: 14 PTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLL 73
Query: 107 RRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVIC 166
R L + T PL R+ G V+
Sbjct: 74 RAGDRLLLLLLGL---------------------DLLHS----PHNTAPLLRLRGVPVV- 107
Query: 167 YTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAM 226
T + I L G + +F + AD +
Sbjct: 108 VTIHDLIPLRFPEYFSPG----------------------FRRYFRRLLRRALRRADAII 145
Query: 227 VNSSWTQSHIEKLWGIPDRIKRVYPPC-------DTSGLQVLPLERSTEYPAIISVAQFR 279
S T+ + + G+P V P + +VL P + V
Sbjct: 146 TVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIE 205
Query: 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339
P K LEAF +L A P P+L VG R +EE L L+ EL + V
Sbjct: 206 PRKNLERLLEAF----ARLPAKGPDPKLVIVGK-RGWLNEELLARLR----ELGLGDRVR 256
Query: 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA 380
F + +L L GA + + E FG+ V+E MA G
Sbjct: 257 FLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT 297
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 5e-09
Identities = 41/163 (25%), Positives = 62/163 (38%), Gaps = 39/163 (23%)
Query: 223 DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
D + NS + I+K +G + +YPP DT P E +Y +SV + P K
Sbjct: 155 DYFIANSRFVARRIKKYYGRDATV--IYPPVDTDRFT--PAEEKEDY--YLSVGRLVPYK 208
Query: 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL--KVDGNVEF 340
L +EAF+ L + RL +G + +RL++ ++ +V
Sbjct: 209 RIDLAIEAFN--------KLGK-RLVVIGDGP---ELDRLRAKAGPNVTFLGRVSDEE-- 254
Query: 341 YKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMAAG 379
L L A E FGI VE MA+G
Sbjct: 255 --------LRDLYARARAFLFPAE-----EDFGIVPVEAMASG 284
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 7e-09
Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 11/136 (8%)
Query: 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE 264
++ + + + AD + S + + + +L G PD+I V+ D P
Sbjct: 115 IFRSPDAIDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPP 174
Query: 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQS 324
E I+SV + +K LE AL L RL VG D
Sbjct: 175 PPGEPLRILSVGRLVEKKGLDYLLE----ALALLKDRGIDFRLDIVG------DGPLRDE 224
Query: 325 LKDKSIELKVDGNVEF 340
L+ EL ++ V
Sbjct: 225 LEALIAELGLEDRVTL 240
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 7e-07
Identities = 47/220 (21%), Positives = 79/220 (35%), Gaps = 37/220 (16%)
Query: 185 SSMYNNNASIAQSNWLSQCKIVYY------------TFFSWMYGLVGSCADLAMVNSSWT 232
S + +A K++ + + + AD + S
Sbjct: 87 SHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGV 146
Query: 233 QSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA-----IISVAQFRPEKAHPL 286
+ + KL GI PD+I+ +Y P D ++ L E I++V + P+K
Sbjct: 147 KEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDT 206
Query: 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY---KN 343
+ AF L + P RL +G + E L++L + EL + V F N
Sbjct: 207 LIRAF----ALLRKEGPDARLVILG---DGPLREELEAL---AKELGLADRVHFLGFQSN 256
Query: 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
L A + + S E F ++E MA G P+
Sbjct: 257 PY-----PYLKAADLFVLSSRYEGFPNVLLEAMALG-TPV 290
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 41/242 (16%), Positives = 76/242 (31%), Gaps = 46/242 (19%)
Query: 144 YFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203
+ G+A L R G ++ H GS +
Sbjct: 101 FAYPDGFAAAL-LKRKLGIPLVVTLH--------------GSDVNLL------------- 132
Query: 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL 263
+ AD + S ++ L P+++ + DT
Sbjct: 133 --PRKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADR 190
Query: 264 ERSTEYPA------IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS 317
+ + I+ V + P K +EA + +L P L VG
Sbjct: 191 AEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALA----RLLKKRPDVHLVIVG-----D 241
Query: 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMA 377
R ++L+ + EL ++ V F + + ++ A V + + E FG+ ++E MA
Sbjct: 242 GPLR-EALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMA 300
Query: 378 AG 379
G
Sbjct: 301 CG 302
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 26/182 (14%)
Query: 210 FFSWMYGLVGSCADLAMVNSSWTQSH-----IEKLWGIPDRIKRVYPP--CDTSGLQVLP 262
+ + L D Q+ KL I + + P D P
Sbjct: 127 LYLLLERLALRFTDKV-----IFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSP 181
Query: 263 LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERL 322
+ P + VA+ +K LEA R L A P RL VG +E
Sbjct: 182 EPIPEDDPVFLFVARLLKDKGIDELLEAA----RILKAKGPNVRLLLVGDG-----DEEN 232
Query: 323 QSLKDKSIELKVDGNVEFYKNLLYR-DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
+ + +L ++G VEF L +R D+ +LL A V + E ++E MA G
Sbjct: 233 PAAILEIEKLGLEGRVEF---LGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMG-R 288
Query: 382 PI 383
P+
Sbjct: 289 PV 290
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 11/124 (8%)
Query: 262 PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER 321
L S + V + PEK +EAF+ L P +L G D
Sbjct: 97 LLALSIGLADKVFVGRLAPEKGLDDLIEAFA----LLKERGPDLKLVIAG------DGPE 146
Query: 322 LQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAV-VGIHSMIDEHFGISVVEYMAAGA 380
+ L++ L + V F L +L+ LL A V + + E FG+ V+E MA G
Sbjct: 147 REYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL 206
Query: 381 IPIG 384
I
Sbjct: 207 PVIA 210
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I VA+ P+K H L A ++ L+K P + + D L+ L K E
Sbjct: 196 IGIVARLHPQKDHATLLRAAALLLKK------FPNARLLLVGDG-PDRANLELLALK--E 246
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
L ++ V D+ LL V + S + E F ++E MA G +P+
Sbjct: 247 LGLEDKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACG-LPV 295
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 388 | |||
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.98 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.98 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.98 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.98 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.98 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.98 | |
| PLN02316 | 1036 | synthase/transferase | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.97 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.97 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.97 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.97 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.97 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.97 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.96 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.96 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.96 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.96 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.96 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.95 | |
| PLN00142 | 815 | sucrose synthase | 99.95 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.95 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.95 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.94 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.93 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.93 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.92 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.9 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.9 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.88 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.87 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.87 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.86 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.86 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.86 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.86 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.86 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.85 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.83 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.79 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.79 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.78 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.77 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.74 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.71 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.71 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.67 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.64 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.62 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.6 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.59 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.56 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.54 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.51 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.43 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.39 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.38 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.24 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.2 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.2 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.17 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.14 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 99.11 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.06 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.03 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.03 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.01 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 98.97 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.95 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 98.92 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 98.82 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 98.77 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.59 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.45 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.39 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.37 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.35 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.29 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 98.21 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.19 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.17 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.14 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.11 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.07 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.07 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.06 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.03 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.0 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.95 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.93 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.77 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.71 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.65 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.57 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 97.54 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.52 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.47 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.44 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.27 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 97.22 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 97.2 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.17 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.14 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.11 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.08 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 96.95 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 96.87 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 96.66 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 96.52 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.51 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 96.18 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 95.95 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.93 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 95.73 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.58 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.24 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 94.97 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.82 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 94.49 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 94.14 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 94.11 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 94.09 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 93.99 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 93.86 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 93.62 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 93.41 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 93.29 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 93.13 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 90.74 | |
| COG2984 | 322 | ABC-type uncharacterized transport system, peripla | 90.52 | |
| PF04392 | 294 | ABC_sub_bind: ABC transporter substrate binding pr | 88.34 | |
| KOG3339 | 211 | consensus Predicted glycosyltransferase [General f | 87.66 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 87.53 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 87.44 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 85.8 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 85.06 | |
| PF12273 | 130 | RCR: Chitin synthesis regulation, resistance to Co | 84.04 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 83.57 | |
| PRK13398 | 266 | 3-deoxy-7-phosphoheptulonate synthase; Provisional | 83.18 | |
| TIGR02990 | 239 | ectoine_eutA ectoine utilization protein EutA. Mem | 82.77 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 82.47 | |
| cd03146 | 212 | GAT1_Peptidase_E Type 1 glutamine amidotransferase | 81.04 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 81.0 | |
| TIGR02069 | 250 | cyanophycinase cyanophycinase. This model describe | 80.59 | |
| PF12996 | 79 | DUF3880: DUF based on E. rectale Gene description | 80.53 | |
| TIGR03682 | 308 | arCOG04112 arCOG04112 universal archaeal diphthami | 80.23 |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-58 Score=439.73 Aligned_cols=362 Identities=80% Similarity=1.351 Sum_probs=324.7
Q ss_pred hhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEec
Q 016535 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY 106 (388)
Q Consensus 27 ~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 106 (388)
.|.|.+++++|+|+||+++.|||+||++++.+.+|++.|++++|+++|++.+.+++++..+..+.+++++..+..++++.
T Consensus 26 ~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~ 105 (463)
T PLN02949 26 LRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLR 105 (463)
T ss_pred HhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEec
Confidence 67777889999999999999999999999999999999988899999999877777777767778999988777888887
Q ss_pred cccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 107 RRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
++.|+++..|++++.++++++.++.++.++.+..||+++++.++++++|++++.++|+++|+|+|+...||+..++.+..
T Consensus 106 ~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~ 185 (463)
T PLN02949 106 KRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRSS 185 (463)
T ss_pred cccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHhhccc
Confidence 79999999999999999999999999998887788999999999999998888899999999999999999999999999
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCC
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERS 266 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~ 266 (388)
.|++...+.++.+....+.+|++.+.+++++..+.+|.++++|+++++.+++.++.+.++.+++||+|.+.+...+....
T Consensus 186 ~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~~~ 265 (463)
T PLN02949 186 MYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLERS 265 (463)
T ss_pred ccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCcccc
Confidence 99999999998888899999999999999999999999999999999999887776667889999998765532222222
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
.++..++++||+.++||++.+|+|++.+.++.+...++++|+++|+++..++.++.+++++++++++++++|+|+|.++.
T Consensus 266 ~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~ 345 (463)
T PLN02949 266 EDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSY 345 (463)
T ss_pred CCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCH
Confidence 34578999999999999999999999987653322378999999998776677888999999999999999999999999
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.++|+.||++++||++|+||++++|||++|+|||++|++
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g 387 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA 387 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC
Confidence 999999999999999999999999999999999999999864
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-53 Score=401.71 Aligned_cols=353 Identities=50% Similarity=0.889 Sum_probs=310.5
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEec-ccccccc
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY-RRKWIEE 113 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~ 113 (388)
+.|+|+||+++.|||+||++++.+.+|++.+.+++|+++|++.+.....++.+..+.++++..++..++.+. .+.|++.
T Consensus 1 ~~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T cd03806 1 NTVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEA 80 (419)
T ss_pred CeEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeecc
Confidence 368999999999999999999999999999777999999999876555677777778888888888877764 6789999
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhh-hcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~-~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
+.+++++..+++++.....++.+.+.+||++++++++++++++++ ..++|+++|+|+|....+++..+..+...|++..
T Consensus 81 ~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~ 160 (419)
T cd03806 81 STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSA 160 (419)
T ss_pred ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCcc
Confidence 999999999999999998888877778999999999888888666 5688999999999888888888888888999999
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEE
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAI 272 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~i 272 (388)
.+++.+.....+.+||+.+.+++++..+.+|.++++|+++++.+.+.++...++.+++||+|++.+.+.+.....+...+
T Consensus 161 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~i 240 (419)
T cd03806 161 TIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQI 240 (419)
T ss_pred chhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEE
Confidence 99999888899999999999999999999999999999999999988765458899999999876654332122445899
Q ss_pred EEEcccCCCCChHHHHHHHHHHHHHhcCC-CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHH
Q 016535 273 ISVAQFRPEKAHPLQLEAFSVALRKLDAD-LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (388)
Q Consensus 273 l~vgrl~~~Kg~~~ll~a~~~l~~~~~~~-~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~ 351 (388)
+|+||+.++||++.+++|++++.++.+.. .++++|+++|++...++.++.++|+++++++++.++|+|+|.+|++++.+
T Consensus 241 l~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~ 320 (419)
T cd03806 241 LSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLE 320 (419)
T ss_pred EEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHH
Confidence 99999999999999999999998764110 13599999999877777788999999999999999999999999999999
Q ss_pred HHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 352 ~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+|+.||++|+||..|+||++++||||||+|||++++
T Consensus 321 ~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ 356 (419)
T cd03806 321 ELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHAS 356 (419)
T ss_pred HHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcC
Confidence 999999999999999999999999999999999986
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-52 Score=356.16 Aligned_cols=354 Identities=43% Similarity=0.748 Sum_probs=315.2
Q ss_pred HHHHhhcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCC-CCe
Q 016535 23 ASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLH-PPK 101 (388)
Q Consensus 23 ~~~~~~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~ 101 (388)
.+++++.++| .+.++|+|||+..|||+||++|...+.+++...++..++++++-+.++++++.+.++.+++++++ ++.
T Consensus 33 ~sl~~~~~k~-~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~ 111 (465)
T KOG1387|consen 33 SSLLNRAEKN-VKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIF 111 (465)
T ss_pred HHhhhhhhhh-ceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceE
Confidence 5555665444 77899999999999999999999999999999999999999998889999999999999999986 558
Q ss_pred eEEeccccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhhhcCCeEEEEEeccccchhhhhh
Q 016535 102 VVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISR 180 (388)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~~~~~~~i~~~h~p~~~~~~~~~ 180 (388)
++++..+.|+....|++++.+++++....+++.++.+..||+.|+++|+++++| +.++.+.|+++|+|+|.++.||+..
T Consensus 112 Fi~Lk~R~lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~ 191 (465)
T KOG1387|consen 112 FIYLKLRYLVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKK 191 (465)
T ss_pred EEEEEeeeeeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 4558999999999999999999998
Q ss_pred hhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCcc
Q 016535 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV 260 (388)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~ 260 (388)
+.++.. ++.+.+.+..||+.|..++..+..+||.++++|.|+.+++.+.+.. .++.++++|++++..+.
T Consensus 192 l~qrq~----------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks 260 (465)
T KOG1387|consen 192 LFQRQK----------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKS 260 (465)
T ss_pred HHhhhh----------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHH
Confidence 886522 2367888899999999999999999999999999999999999985 78889999999876554
Q ss_pred CCCCCCCCCcEEEEEcccCCCCChH-HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 016535 261 LPLERSTEYPAIISVAQFRPEKAHP-LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (388)
Q Consensus 261 ~~~~~~~~~~~il~vgrl~~~Kg~~-~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~ 339 (388)
....+.++.+.++++|.+.|+|++. +-++|+-...+......++++|+++|++..++|.++.+.++..++++.++.+|.
T Consensus 261 ~~~te~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~ 340 (465)
T KOG1387|consen 261 KFGTEGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQ 340 (465)
T ss_pred HhcccCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceE
Confidence 3333446679999999999999999 334444444333222347899999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|.-.+|.+++.++|..|.+.|+.-+.|.||+++.|+||+|+.+|+.|++
T Consensus 341 F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~Sg 389 (465)
T KOG1387|consen 341 FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSG 389 (465)
T ss_pred EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCC
Confidence 9999999999999999999999999999999999999999999999985
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=292.12 Aligned_cols=317 Identities=26% Similarity=0.378 Sum_probs=223.5
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+|++|+...| |+|+++.+++++|.++| |+|+++|...+ ......+..+ + ...+... +.+.+..
T Consensus 1 mkIl~~~~~~~~g-G~e~~~~~la~~L~~~G--~~V~v~~~~~~--~~~~~~~~~~--~-----~~~i~~~--~~~~~~~ 66 (392)
T cd03805 1 LRVAFIHPDLGIG-GAERLVVDAALALQSRG--HEVTIYTSHHD--PSHCFEETKD--G-----TLPVRVR--GDWLPRS 66 (392)
T ss_pred CeEEEECCCCCCc-hHHHHHHHHHHHHHhCC--CeEEEEcCCCC--chhcchhccC--C-----eeEEEEE--eEEEcch
Confidence 7899999999866 99999999999999999 88899886531 1111111111 0 0111111 1122222
Q ss_pred CCCceehhhhhhhHHHHHHH--HHhhcCCcEEEecCCcccccchhh-hcCCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 115 TYPRFTMIGQSFGSVYLSWE--ALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~--~l~~~~~Div~~~~~~~~~~~~~~-~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
.+.++..+...++....... .....++|++|.+.. ....++.+ ..+.|+++++|+|+.....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~-~~~~~~~~~~~~~~~i~~~h~~~~~~~~-------------- 131 (392)
T cd03805 67 IFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQV-SACVPLLKLFSPSKILFYCHFPDQLLAQ-------------- 131 (392)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCc-chHHHHHHHhcCCcEEEEEecChHHhcC--------------
Confidence 22222222223333222222 245568999876543 22233333 3347899999976521100
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-C-CceEEEcCCCCCCCCccCCCC-----
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-P-DRIKRVYPPCDTSGLQVLPLE----- 264 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~-~~~~vi~ngvd~~~~~~~~~~----- 264 (388)
. ....+..+...+.+++++.++.+|.++++|+++++.+.+.++. . ..+.+++||+|.+.+.+.+..
T Consensus 132 ----~---~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~ 204 (392)
T cd03805 132 ----R---GSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGL 204 (392)
T ss_pred ----C---CcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccccccc
Confidence 0 1233345556677889999999999999999999999876654 2 234589999998776543221
Q ss_pred --CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHHHh-cCCCCcEE
Q 016535 265 --RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIE-LKVDGNVE 339 (388)
Q Consensus 265 --~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~--~~~~~~~~l~~~~~~-~~l~~~V~ 339 (388)
...+.+.++++||+.+.||++.+++|++++.++.. +.++++|+++|+++.+ ++.++.+++++.+++ +++.++|.
T Consensus 205 ~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~-~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~ 283 (392)
T cd03805 205 LIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLA-EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVI 283 (392)
T ss_pred cccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcc-cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEE
Confidence 12456889999999999999999999999977631 1158999999988643 334567899999999 99999999
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|+|+++++++.++|+.||++++||..|+||++++|||+||+|||++|.+
T Consensus 284 f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~ 332 (392)
T cd03805 284 FLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSG 332 (392)
T ss_pred EeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCC
Confidence 9999999999999999999999999999999999999999999999863
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=277.02 Aligned_cols=296 Identities=16% Similarity=0.157 Sum_probs=207.0
Q ss_pred eEEEecc-ccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p-~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+++.+ +.+..||+++.+.+++++|.++| |+|+++|...+.... .+ ....++.+.+++...+....
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~~---~~-------~~~~~i~v~~~p~~~~~~~~ 68 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRVG---IR-------YLTNGLKVYYLPFVVFYNQS 68 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCCC---cc-------cccCceeEEEecceeccCCc
Confidence 4566554 33345799999999999999999 888998865311100 00 00112233333221111111
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc----hhhhcCCeEEEEEeccccchhhhhhhhcCCccccC
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP----LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~----~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (388)
... ..+.......+.+.+.+||+||.+..+..... .++..++|.+++.|......+
T Consensus 69 ~~~------~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~-------------- 128 (398)
T cd03796 69 TLP------TFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFAD-------------- 128 (398)
T ss_pred ccc------chhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccc--------------
Confidence 110 11111222233456779999988865433221 345678899988885220000
Q ss_pred CccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCCCCCC
Q 016535 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (388)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~ 269 (388)
......+++.++..+++|.++++|+..++.+....+. ..++.++|||+|.+.|.+......+++
T Consensus 129 ---------------~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~~~~~~ 193 (398)
T cd03796 129 ---------------ASSIHTNKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSKRDNDK 193 (398)
T ss_pred ---------------hhhHHhhHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcccCCCCc
Confidence 0001122345677889999999999998876433333 467899999999877755332223456
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
++++++||+.++||++.+++|+..+.++. ++++|+++|+++.. +.++++++++++.++|+|+|+++++++
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~------~~l~~~~~~~~l~~~v~~~G~~~~~~~ 263 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKKH----PNVRFIIGGDGPKR------ILLEEMREKYNLQDRVELLGAVPHERV 263 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhhC----CCEEEEEEeCCchH------HHHHHHHHHhCCCCeEEEeCCCCHHHH
Confidence 89999999999999999999999998775 89999999976533 478999999999999999999999999
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.++|+.||++++||..|+||++++|||+||+|||+++.+
T Consensus 264 ~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~g 302 (398)
T cd03796 264 RDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVG 302 (398)
T ss_pred HHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCC
Confidence 999999999999999999999999999999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=267.29 Aligned_cols=316 Identities=12% Similarity=-0.001 Sum_probs=206.4
Q ss_pred ceEEEecc-ccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh-hhceecCCCCeeEEeccccccc
Q 016535 35 TSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFGVELLHPPKVVHLYRRKWIE 112 (388)
Q Consensus 35 ~~I~~~~p-~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~ 112 (388)
|||+++.. +.+.-||+++.+.+++++|.++| |+|+++|+.+..+......+..+ ........++.+++++. +.+
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~--~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPL--YVP 76 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccc--cCC
Confidence 67887753 33334699999999999999999 88999997643221111100000 01111123334444332 111
Q ss_pred cCCCCceehhhhhhhHHHHHHHH-Hh--hcCCcEEEecCCcccccc----hhhhcCCeEEEEEeccccchhhhhhhhcCC
Q 016535 113 ESTYPRFTMIGQSFGSVYLSWEA-LC--KFTPLYYFDTSGYAFTYP----LARIFGCRVICYTHYPTISLDMISRVREGS 185 (388)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~-l~--~~~~Div~~~~~~~~~~~----~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~ 185 (388)
.. ...+..+..........+.. .. ..+||+||.+....+..+ +++..++|.++++|... .+..... .
T Consensus 77 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~--~~~~~~~--~- 150 (412)
T PRK10307 77 KQ-PSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYE--VDAAFGL--G- 150 (412)
T ss_pred CC-ccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCC--HHHHHHh--C-
Confidence 00 00000011111111111111 11 268999987654322222 44567888888777422 1111000 0
Q ss_pred ccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC
Q 016535 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER 265 (388)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~ 265 (388)
. .......+...+++++.++.+|.++++|+..++.+.+......++.++|||+|.+.+.+.....
T Consensus 151 -------------~--~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~ 215 (412)
T PRK10307 151 -------------L--LKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADAD 215 (412)
T ss_pred -------------C--ccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccc
Confidence 0 0011233445567888999999999999999999987643356899999999987665432110
Q ss_pred ----------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC
Q 016535 266 ----------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD 335 (388)
Q Consensus 266 ----------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~ 335 (388)
..++.+++|+|++.++||++.+++|++.+.+. ++++|+++|+|+.. +++++++++++++
T Consensus 216 ~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~-----~~~~l~ivG~g~~~------~~l~~~~~~~~l~ 284 (412)
T PRK10307 216 VDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLRDR-----PDLIFVICGQGGGK------ARLEKMAQCRGLP 284 (412)
T ss_pred hHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhccC-----CCeEEEEECCChhH------HHHHHHHHHcCCC
Confidence 13457899999999999999999999988543 68999999977543 3888899999986
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCC----CChHHHHHHHhCCceEeeCC
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH----FGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~----~~~~vlEAma~G~PVI~~~~ 387 (388)
+|.|+|+++++++.++|+.||++++||..|+ +|..++|||+||+|||+++.
T Consensus 285 -~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~ 339 (412)
T PRK10307 285 -NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAE 339 (412)
T ss_pred -ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeC
Confidence 8999999999999999999999999999998 56678999999999999974
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=255.74 Aligned_cols=292 Identities=15% Similarity=0.130 Sum_probs=200.9
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
.+|+++.+....| |+|+++.+++++|.+.| +++++++... .+....+... .++ .++.+....
T Consensus 2 ~~il~ii~~~~~G-G~e~~~~~l~~~l~~~~--~~~~v~~~~~---~~~~~~~~~~-~~i------~~~~~~~~~----- 63 (374)
T TIGR03088 2 PLIVHVVYRFDVG-GLENGLVNLINHLPADR--YRHAVVALTE---VSAFRKRIQR-PDV------AFYALHKQP----- 63 (374)
T ss_pred ceEEEEeCCCCCC-cHHHHHHHHHhhccccc--cceEEEEcCC---CChhHHHHHh-cCc------eEEEeCCCC-----
Confidence 5789999999776 99999999999999999 5555555322 1222222221 122 233332210
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhhhcCCeEEE-EEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVIC-YTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~~~~~~~i~-~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
... +......++.+.+.+||+||.+........ +++..+.|..+ ..|.... ..
T Consensus 64 -~~~-------~~~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~----~~------------- 118 (374)
T TIGR03088 64 -GKD-------VAVYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDV----FD------------- 118 (374)
T ss_pred -CCC-------hHHHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCccc----cc-------------
Confidence 001 112233445677889999987643221111 33445555422 2222110 00
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCC------
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER------ 265 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~------ 265 (388)
.... ...+.++.+...+.+|.++++|+..++.+.+.++. ..++.+++||+|.+.+.+.....
T Consensus 119 --------~~~~---~~~~~~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~ 187 (374)
T TIGR03088 119 --------LDGS---NWKYRWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPP 187 (374)
T ss_pred --------chhh---HHHHHHHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHh
Confidence 0000 01122345556667899999999999999877664 46788999999987765432111
Q ss_pred ---CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 266 ---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 266 ---~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
..++.+++++||+.++||++.+++|++.+.++.+...++++|+++|+|+.. +++++.++++++++++.|.|
T Consensus 188 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~~g 261 (374)
T TIGR03088 188 DFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPAR------GACEQMVRAAGLAHLVWLPG 261 (374)
T ss_pred hcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCchH------HHHHHHHHHcCCcceEEEcC
Confidence 145689999999999999999999999998775322247999999977543 37889999999998999999
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 343 ~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.. +|+.++|+.||++++||..|+||++++|||+||+|||+||.+
T Consensus 262 ~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~ 305 (374)
T TIGR03088 262 ER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVG 305 (374)
T ss_pred Cc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCC
Confidence 75 799999999999999999999999999999999999999864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=260.57 Aligned_cols=306 Identities=16% Similarity=0.119 Sum_probs=202.4
Q ss_pred cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceeh
Q 016535 42 PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTM 121 (388)
Q Consensus 42 p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (388)
|.....||+|+++.+++++|.++| |+|+++|......... .....+++.+.++....+.. ......
T Consensus 14 ~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~~~---------~~~~~~~~~v~~~~~~~~~~---~~~~~~ 79 (405)
T TIGR03449 14 PGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQPP---------VVEVAPGVRVRNVVAGPYEG---LDKEDL 79 (405)
T ss_pred CCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCCCC---------ccccCCCcEEEEecCCCccc---CCHHHH
Confidence 344444699999999999999999 8899998753211000 11122333444432211110 000000
Q ss_pred hhhhhhHHHHHH-HHHh--hcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccc
Q 016535 122 IGQSFGSVYLSW-EALC--KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (388)
Q Consensus 122 ~~~~~~~~~~~~-~~l~--~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (388)
...........+ ..+. ..++|+||.+........ +.+..++|.+.++|.... ...... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~---~~~~~~------------~~ 144 (405)
T TIGR03449 80 PTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAA---VKNAAL------------AD 144 (405)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHH---HHHHhc------------cC
Confidence 000000011112 1222 247999987653221111 334678899998885321 000000 00
Q ss_pred cchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCC-------CCCC
Q 016535 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-------RSTE 268 (388)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~-------~~~~ 268 (388)
. .. .......++++..++.+|.++++|+...+.+.+.++. ..++.+++||+|.+.+.+.+.. ...+
T Consensus 145 ~---~~---~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~ 218 (405)
T TIGR03449 145 G---DT---PEPEARRIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLD 218 (405)
T ss_pred C---CC---CchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCC
Confidence 0 00 0001122346777889999999999999988776654 4678999999998776543211 1134
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCC--cEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR--PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~--~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.+++++||+.+.||++.+++|++.+.++. ++ ++|+++|++... ..++.++++++++++++.++|+|+|++++
T Consensus 219 ~~~i~~~G~l~~~K~~~~li~a~~~l~~~~----~~~~~~l~ivG~~~~~-g~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 293 (405)
T TIGR03449 219 TKVVAFVGRIQPLKAPDVLLRAVAELLDRD----PDRNLRVIVVGGPSGS-GLATPDALIELAAELGIADRVRFLPPRPP 293 (405)
T ss_pred CcEEEEecCCCcccCHHHHHHHHHHHHhhC----CCcceEEEEEeCCCCC-cchHHHHHHHHHHHcCCCceEEECCCCCH
Confidence 588999999999999999999999997775 44 999999964321 11455689999999999999999999999
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+.||++++||..|+||++++|||++|+|||+++.
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~ 334 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARV 334 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecC
Confidence 99999999999999999999999999999999999999985
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=261.94 Aligned_cols=293 Identities=18% Similarity=0.186 Sum_probs=197.9
Q ss_pred CccceEEEe-cc--ccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccc
Q 016535 32 NRTTSVAFF-HP--NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (388)
Q Consensus 32 ~~~~~I~~~-~p--~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 108 (388)
+++|||+++ +| .... ||.++.+.+++++|.++| |+|++++.....+ + + ..++.+ +.....
T Consensus 56 ~~~mrI~~~~~~~~~~~~-gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~-~----~---~~g~~v------~~~~~~ 118 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYV-SGYKNRFQNFIRYLREMG--DEVLVVTTDEGVP-Q----E---FHGAKV------IGSWSF 118 (465)
T ss_pred CCCceEEEEECCcCCccc-ccHHHHHHHHHHHHHHCC--CeEEEEecCCCCC-c----c---ccCcee------eccCCc
Confidence 678999977 33 3334 499999999999999999 8888988764211 1 0 011111 110000
Q ss_pred cccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCC
Q 016535 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGS 185 (388)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~ 185 (388)
. .+ .+..+.. .+.......+.+.+.+||+||.+........ +++..++|.+...|.... ....
T Consensus 119 ~-~~--~~~~~~~---~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~--~~~~------ 184 (465)
T PLN02871 119 P-CP--FYQKVPL---SLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVP--VYIP------ 184 (465)
T ss_pred C-Cc--cCCCcee---eccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCch--hhhh------
Confidence 0 00 0000000 0000112334567789999987754322222 345678999988885220 0000
Q ss_pred ccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCC
Q 016535 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE 264 (388)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~ 264 (388)
...+ .. .. +....++++..+.+|.++++|+..++.+.+.+.. ..++.++|||+|.+.|.+....
T Consensus 185 ----------~~~~-~~---~~-~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~ 249 (465)
T PLN02871 185 ----------RYTF-SW---LV-KPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRS 249 (465)
T ss_pred ----------cccc-hh---hH-HHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCcccc
Confidence 0000 00 11 1112245677788999999999999999876532 4689999999998877543211
Q ss_pred ---------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC
Q 016535 265 ---------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD 335 (388)
Q Consensus 265 ---------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~ 335 (388)
..++.+.++|+||+.++||++.++++++.+ ++++|+++|+|+. .+++++++++
T Consensus 250 ~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~--------~~~~l~ivG~G~~------~~~l~~~~~~---- 311 (465)
T PLN02871 250 EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL--------PGARLAFVGDGPY------REELEKMFAG---- 311 (465)
T ss_pred HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC--------CCcEEEEEeCChH------HHHHHHHhcc----
Confidence 113457899999999999999999998766 7899999996643 3477777664
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.+|+|+|+++++|+.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 312 ~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g 364 (465)
T PLN02871 312 TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAG 364 (465)
T ss_pred CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCC
Confidence 47999999999999999999999999999999999999999999999999853
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=256.94 Aligned_cols=311 Identities=16% Similarity=0.107 Sum_probs=201.6
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCc--hhHHHHhhhhhceecCCCCee---EEec---
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFP--DSLLARAVDRFGVELLHPPKV---VHLY--- 106 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~---~~~~--- 106 (388)
|+|+|+.+..+. -.|+++.+-+.+|.++| ++|.+++-.+..+. ..........-.+...+.... ..+.
T Consensus 1 m~ia~~~~~~P~--~setFi~~ei~~l~~~G--~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (406)
T PRK15427 1 MKVGFFLLKFPL--SSETFVLNQITAFIDMG--FEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRA 76 (406)
T ss_pred CeEEEEeccCCc--cchhhHHHHHHHHHHcC--ceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhh
Confidence 689999776664 47999999999999999 78888875542110 000010000001111100000 0000
Q ss_pred ---cccccccCCCCceehhh--hhhhHHHHH---HHHHhhcCCcEEEecCCcccccc--hhh--hcCCeEEEEEeccccc
Q 016535 107 ---RRKWIEESTYPRFTMIG--QSFGSVYLS---WEALCKFTPLYYFDTSGYAFTYP--LAR--IFGCRVICYTHYPTIS 174 (388)
Q Consensus 107 ---~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~l~~~~~Div~~~~~~~~~~~--~~~--~~~~~~i~~~h~p~~~ 174 (388)
...+........+.+.. .....+... ...+.+.++|++|++.+...... +.. ..+.+.+.++|..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~ 156 (406)
T PRK15427 77 SQTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDIS 156 (406)
T ss_pred hhHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccc
Confidence 00000000000001100 001111111 11245668999998765332211 222 2234667788865421
Q ss_pred hhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCC
Q 016535 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD 254 (388)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd 254 (388)
... ....+. ...+..++++|.++++|+..++.+.+.....+++.++|||+|
T Consensus 157 ~~~-------------------------~~~~~~----~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~nGvd 207 (406)
T PRK15427 157 SRE-------------------------VLNHYT----PEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSRMGVD 207 (406)
T ss_pred cch-------------------------hhhhhh----HHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcCCCCC
Confidence 100 000111 124445678999999999999999775332568999999999
Q ss_pred CCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC
Q 016535 255 TSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV 334 (388)
Q Consensus 255 ~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l 334 (388)
.+.|.+.+.....++..++++||+.+.||++.+++|++.+++++ ++++++++|+|+. .+++++.++++++
T Consensus 208 ~~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~----~~~~l~ivG~G~~------~~~l~~~~~~~~l 277 (406)
T PRK15427 208 MTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQG----VAFRYRILGIGPW------ERRLRTLIEQYQL 277 (406)
T ss_pred HHHcCCCccccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhC----CCEEEEEEECchh------HHHHHHHHHHcCC
Confidence 88776433222244578999999999999999999999998775 7999999996643 3489999999999
Q ss_pred CCcEEEccCCCHHHHHHHHHhCcEEEEcCC------CCCCChHHHHHHHhCCceEeeCCC
Q 016535 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMI------DEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 335 ~~~V~~~g~v~~~~l~~~~~~adv~v~ps~------~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.++|.|+|+++++++.++|+.||++|+||. .||+|++++|||+||+|||+|+.+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~ 337 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS 337 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC
Confidence 999999999999999999999999999997 499999999999999999999853
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=251.60 Aligned_cols=288 Identities=17% Similarity=0.110 Sum_probs=201.3
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||++++++.+ .||+++++.+++++|.+.| ++|++++..... ........ ..+. .++.... ..
T Consensus 1 kIl~~~~~~~-~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~--~~~~~~~~-~~~~------~~~~~~~------~~ 62 (358)
T cd03812 1 KILHIVGTMN-RGGIETFIMNYYRNLDRSK--IQFDFLVTSKEE--GDYDDEIE-KLGG------KIYYIPA------RK 62 (358)
T ss_pred CEEEEeCCCC-CccHHHHHHHHHHhcCccc--eEEEEEEeCCCC--cchHHHHH-HcCC------eEEEecC------CC
Confidence 6899999884 4599999999999999999 888888876421 11111111 1121 2222111 00
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeE-EEEEeccccchhhhhhhhcCCccccCCc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRV-ICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~-i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
. ....+ .....+.+.+.+||+||.+......+. +.+..+.+. +.+.|........
T Consensus 63 ~----~~~~~---~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------------- 120 (358)
T cd03812 63 K----NPLKY---FKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDK--------------- 120 (358)
T ss_pred c----cHHHH---HHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccc---------------
Confidence 0 01111 122233456789999987655322222 223445554 4555643211000
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC--------
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------- 264 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~-------- 264 (388)
....... .++++...+.++.+++.|+..++.+.+. ....++.++|||+|.+.+.+....
T Consensus 121 ----------~~~~~~~--~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~ 187 (358)
T cd03812 121 ----------KKKILKY--KVLRKLINRLATDYLACSEEAGKWLFGK-VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELG 187 (358)
T ss_pred ----------cchhhHH--HHHHHHHHhcCCEEEEcCHHHHHHHHhC-CCcccEEEEeccCcHHHcCCCchhhhHHHHcC
Confidence 0000101 3456777888999999999999998765 225689999999998765443211
Q ss_pred CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 265 ~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
...+++.++|+||+.++||++.+++|++.+.+++ ++++++++|+|+..+ .+++.+++++++++|.++|.
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~~------~~~~~~~~~~~~~~v~~~g~- 256 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN----PNAKLLLVGDGELEE------EIKKKVKELGLEDKVIFLGV- 256 (358)
T ss_pred CCCCCEEEEEEeccccccChHHHHHHHHHHHHhC----CCeEEEEEeCCchHH------HHHHHHHhcCCCCcEEEecc-
Confidence 1245689999999999999999999999998875 899999999775443 78888889999999999998
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.+++.++|+.||++|+||..|++|++++||||+|+|||+++.+
T Consensus 257 -~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~ 299 (358)
T cd03812 257 -RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTI 299 (358)
T ss_pred -cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCC
Confidence 4889999999999999999999999999999999999999864
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=253.20 Aligned_cols=289 Identities=18% Similarity=0.146 Sum_probs=199.6
Q ss_pred ceEEEec-cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 35 TSVAFFH-PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 35 ~~I~~~~-p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
|||++++ |.. ||.++++.+++++|.++| |+|++++...+. ..... . .++ .+....... .+.
T Consensus 1 mki~~~~~p~~---gG~~~~~~~la~~L~~~G--~~v~v~~~~~~~---~~~~~-~--~~~------~~~~~~~~~-~~~ 62 (371)
T cd04962 1 MKIGIVCYPTY---GGSGVVATELGKALARRG--HEVHFITSSRPF---RLDEY-S--PNI------FFHEVEVPQ-YPL 62 (371)
T ss_pred CceeEEEEeCC---CCccchHHHHHHHHHhcC--CceEEEecCCCc---chhhh-c--cCe------EEEEecccc-cch
Confidence 5777774 343 799999999999999999 778888765311 11000 0 011 111111100 000
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hh-hh---cCCeEEEEEeccccchhhhhhhhcCCcc
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA-RI---FGCRVICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~-~~---~~~~~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
...+. ..........+.+.+.+||+||.+...+.... ++ +. .++|.+++.|....... .
T Consensus 63 ~~~~~-----~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--~-------- 127 (371)
T cd04962 63 FQYPP-----YDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLV--G-------- 127 (371)
T ss_pred hhcch-----hHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccc--c--------
Confidence 00000 11112223344567789999987654332222 22 22 27889988885431100 0
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC---
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--- 264 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~--- 264 (388)
. ...+.++.+...+.+|.+++.|+..++.+.+.++...++.++|||+|...+.+....
T Consensus 128 --------~-----------~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~ 188 (371)
T cd04962 128 --------Q-----------DPSFQPATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALK 188 (371)
T ss_pred --------c-----------cccchHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHH
Confidence 0 001122456677889999999999999998776556789999999997655432211
Q ss_pred ----CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEE
Q 016535 265 ----RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340 (388)
Q Consensus 265 ----~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~ 340 (388)
...+..+++++||+.+.||++.+++|+..+.++ ++++++++|.+++.+ .+++.+++++++++|.|
T Consensus 189 ~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-----~~~~l~i~G~g~~~~------~~~~~~~~~~~~~~v~~ 257 (371)
T cd04962 189 RRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-----VPARLLLVGDGPERS------PAERLARELGLQDDVLF 257 (371)
T ss_pred HhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhc-----CCceEEEEcCCcCHH------HHHHHHHHcCCCceEEE
Confidence 113457899999999999999999999999766 479999999876443 78888889999889999
Q ss_pred ccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 341 YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 341 ~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+|.. +++.++|+.||++++||..|+||++++|||++|+|||+++.+
T Consensus 258 ~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~ 303 (371)
T cd04962 258 LGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAG 303 (371)
T ss_pred ecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC
Confidence 9987 689999999999999999999999999999999999999853
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=248.17 Aligned_cols=310 Identities=20% Similarity=0.194 Sum_probs=198.2
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
+|+|+|+..+.. ..+++++|.++| |+|+++|........ . +++++.+..........
T Consensus 1 ~il~~~~~~p~~------~~~la~~L~~~G--~~v~~~~~~~~~~~~----------~-----~v~~~~~~~~~~~~~~~ 57 (396)
T cd03818 1 RILFVHQNFPGQ------FRHLAPALAAQG--HEVVFLTEPNAAPPP----------G-----GVRVVRYRPPRGPTSGT 57 (396)
T ss_pred CEEEECCCCchh------HHHHHHHHHHCC--CEEEEEecCCCCCCC----------C-----CeeEEEecCCCCCCCCC
Confidence 589999888533 457999999999 888888876521101 0 22333332211111111
Q ss_pred CCceehhhhhhh---HHHHHHHH--HhhcCCcEEEecCCcccccchhh-hcCCeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 116 YPRFTMIGQSFG---SVYLSWEA--LCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 116 ~~~~~~~~~~~~---~~~~~~~~--l~~~~~Div~~~~~~~~~~~~~~-~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
++.......... ........ ....+||+||.+.++.....+.. ..++|.+.++|+.... ......+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~-------~~~~~~~~ 130 (396)
T cd03818 58 HPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRA-------EGADVGFD 130 (396)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecC-------CCCCCCCC
Confidence 222211111111 11111111 23457999999988765544444 3568999888753210 00000111
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC----
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---- 265 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~---- 265 (388)
.. . .. ........+...++....++.+|.++++|+++++.+.+.++ .++.+||||+|++.+.+.+...
T Consensus 131 ~~-~-~~----~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~--~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 131 PE-F-PP----SLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR--SRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred CC-C-CC----chhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc--cceEEeCCCccccccCCCchhhhccc
Confidence 00 0 00 00000111222223567788999999999999999877653 5899999999988776533211
Q ss_pred -----CCCCcEEEEEcc-cCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC-----CccHH-HHHHHHHHHH-hc
Q 016535 266 -----STEYPAIISVAQ-FRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-----KSDEE-RLQSLKDKSI-EL 332 (388)
Q Consensus 266 -----~~~~~~il~vgr-l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~-----~~~~~-~~~~l~~~~~-~~ 332 (388)
..+...++|+|| +.+.||++.+++|++.+.++. |+++|+++|++.. .++++ +.+++.+... ++
T Consensus 203 ~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~----~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 278 (396)
T cd03818 203 NGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRAR----PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRL 278 (396)
T ss_pred ccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHC----CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhccc
Confidence 124578999997 999999999999999998875 8999999997421 11111 2333333222 22
Q ss_pred CCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 333 KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 333 ~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+ .++|+|+|++|++++.++|+.||++++||..|++|++++||||||+|||++|.+
T Consensus 279 ~-~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~ 333 (396)
T cd03818 279 D-LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA 333 (396)
T ss_pred C-cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC
Confidence 2 368999999999999999999999999999999999999999999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=257.50 Aligned_cols=310 Identities=15% Similarity=0.064 Sum_probs=202.8
Q ss_pred ccc-eEEEeccccCCCCChhhHHHHHHHHHhhcCC------------CceEEEEecCCCCCchhHHHHhhhhhceecCCC
Q 016535 33 RTT-SVAFFHPNTNDGGGGERVLWCAVKAIQEESP------------DLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP 99 (388)
Q Consensus 33 ~~~-~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~------------~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~ 99 (388)
+.. +|+++.+..+.| |+|+++.+|+++|.+.+. .+.|++++.......+....+.. ..++++
T Consensus 279 ~~~~rIl~vi~sl~~G-GAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~-~~Gv~v--- 353 (694)
T PRK15179 279 SFVGPVLMINGSLGAG-GAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLA-DAGIPV--- 353 (694)
T ss_pred CCcceEEEEeCCCCCC-cHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHH-hCCCeE---
Confidence 345 899999999888 999999999999999953 24566653221000011222221 223322
Q ss_pred CeeEEecccc-cccc---CCCCcee----hh-hhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEE
Q 016535 100 PKVVHLYRRK-WIEE---STYPRFT----MI-GQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYT 168 (388)
Q Consensus 100 ~~~~~~~~~~-~~~~---~~~~~~~----~~-~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~ 168 (388)
..+.... +... .....+. .+ .......+...+++++.+||+||.+......+. .++..++|.+++.
T Consensus 354 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t 430 (694)
T PRK15179 354 ---SVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRIVLS 430 (694)
T ss_pred ---EEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEE
Confidence 2222211 0000 0000000 00 011222334455678889999997765443222 3446678877644
Q ss_pred -eccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCce
Q 016535 169 -HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRI 246 (388)
Q Consensus 169 -h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~ 246 (388)
|.-. . .. .. ...+..+...+. ......++.++++|+..++.+.+.++. ..++
T Consensus 431 ~h~~~--~-~~-----------------~~---~~~~~~~~~l~~---~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI 484 (694)
T PRK15179 431 VRTMP--P-VD-----------------RP---DRYRVEYDIIYS---ELLKMRGVALSSNSQFAAHRYADWLGVDERRI 484 (694)
T ss_pred eCCCc--c-cc-----------------ch---hHHHHHHHHHHH---HHHhcCCeEEEeCcHHHHHHHHHHcCCChhHE
Confidence 4210 0 00 00 011111222211 122234567888899988888776555 4689
Q ss_pred EEEcCCCCCCCCccCCCC----------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC
Q 016535 247 KRVYPPCDTSGLQVLPLE----------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK 316 (388)
Q Consensus 247 ~vi~ngvd~~~~~~~~~~----------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~ 316 (388)
.+||||+|...+.+.+.. ...+.++|+++||+.+.||++.+++|++.+.++. |+++|+|+|+|+..
T Consensus 485 ~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~----p~~~LvIvG~G~~~ 560 (694)
T PRK15179 485 PVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASH----PKVRFIMVGGGPLL 560 (694)
T ss_pred EEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHC----cCeEEEEEccCcch
Confidence 999999997766432210 1123468999999999999999999999998775 89999999987644
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 317 SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 317 ~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+ +++++++++++.++|.|+|++ +++..+|+.+|++|+||.+|+||++++|||+||+|||+|+.+
T Consensus 561 ~------~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g 624 (694)
T PRK15179 561 E------SVREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG 624 (694)
T ss_pred H------HHHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCC
Confidence 3 899999999999999999997 689999999999999999999999999999999999999853
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=249.95 Aligned_cols=279 Identities=15% Similarity=0.152 Sum_probs=190.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhcee-cCCCCeeEEecccccccc
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE-LLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~ 113 (388)
|||+++.+.....||+|+++.+++++|.++|+.+++++++...... .... +..+.. ..+.. .+
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~-~~~~----~~~~~~~~~~~~---~~-------- 64 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMD-KAWL----KEIKYAQSFSNI---KL-------- 64 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCC-hHHH----Hhcchhcccccc---hh--------
Confidence 7999999887655699999999999999995559999888764211 1111 111100 00000 00
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCe--EEEEEeccccchhhhhhhhcCCcccc
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR--VICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~--~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
..+.. ........+.+.+.+||+||++......+. +.+..+.| .+.+.|....
T Consensus 65 ---~~~~~----~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~---------------- 121 (359)
T PRK09922 65 ---SFLRR----AKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLD---------------- 121 (359)
T ss_pred ---hhhcc----cHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccc----------------
Confidence 00000 011122335677889999987754332221 22334444 3444443110
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCC
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEY 269 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~ 269 (388)
.. .... . ..+..+|.++++|+.+++.+.+.+....++.++|||+|.+.+..... ...++
T Consensus 122 -----------~~---~~~~----~--~~~~~~d~~i~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~~~-~~~~~ 180 (359)
T PRK09922 122 -----------HK---KHAE----C--KKITCADYHLAISSGIKEQMMARGISAQRISVIYNPVEIKTIIIPPP-ERDKP 180 (359)
T ss_pred -----------cc---chhh----h--hhhhcCCEEEEcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCCCc-ccCCC
Confidence 00 0000 0 11267999999999999999875333567999999999654322111 12345
Q ss_pred cEEEEEcccC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC--
Q 016535 270 PAIISVAQFR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL-- 345 (388)
Q Consensus 270 ~~il~vgrl~--~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~-- 345 (388)
..++++||+. +.||++.+++|+.++. ++++|+++|+|++.+ ++++.+++++++++|.|+|+++
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~-------~~~~l~ivG~g~~~~------~l~~~~~~~~l~~~v~f~G~~~~~ 247 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTT-------GEWQLHIIGDGSDFE------KCKAYSRELGIEQRIIWHGWQSQP 247 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhC-------CCeEEEEEeCCccHH------HHHHHHHHcCCCCeEEEecccCCc
Confidence 8899999996 4699999999999872 479999999876543 7899999999999999999885
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+++.++|+.+|++|+||..|+||++++||||||+|||++|
T Consensus 248 ~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~ 288 (359)
T PRK09922 248 WEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSD 288 (359)
T ss_pred HHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeC
Confidence 48899999999999999999999999999999999999998
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-30 Score=255.04 Aligned_cols=336 Identities=12% Similarity=0.027 Sum_probs=211.0
Q ss_pred CccceEEEec----cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh-hhce------------
Q 016535 32 NRTTSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFGV------------ 94 (388)
Q Consensus 32 ~~~~~I~~~~----p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~-~~~i------------ 94 (388)
...|+|+|+. |....| |.+-++..|.++|+++| |+|.|+++.++.-.......... ....
T Consensus 479 ~~~mkILfVasE~aP~aKtG-GLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~ 555 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVG-GLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNK 555 (977)
T ss_pred CCCCEEEEEEcccccccccc-cHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEE
Confidence 4689999974 666666 99999999999999999 88889988763211110000000 0000
Q ss_pred ---ecCCCCeeEEeccc---ccccc-CCCCceehhhhhhhHHHHHHHHHh--hcCCcEEEecCCccccc-chhh------
Q 016535 95 ---ELLHPPKVVHLYRR---KWIEE-STYPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTY-PLAR------ 158 (388)
Q Consensus 95 ---~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~-~~~~------ 158 (388)
...+++.++.+... .+..+ ..+....-..++..+-.....++. ..+|||||++.+....+ |+.+
T Consensus 556 v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~ 635 (977)
T PLN02939 556 IWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPK 635 (977)
T ss_pred EEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhc
Confidence 01122333433210 01111 111111111111111111222333 35899999887655443 3322
Q ss_pred -hcCCeEEEEEeccccchhh-hhhhhcCCccccCCc--cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHH
Q 016535 159 -IFGCRVICYTHYPTISLDM-ISRVREGSSMYNNNA--SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234 (388)
Q Consensus 159 -~~~~~~i~~~h~p~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~ 234 (388)
..++++++++|.-.+.-.. ...+. ....+ .+... ..+...++... .+.+..+..+|.++++|+..++
T Consensus 636 ~~~~~ktVfTIHNl~yQG~f~~~~l~-----~lGL~~~~l~~~---d~le~~~~~~i-N~LK~GIv~AD~VtTVSptYA~ 706 (977)
T PLN02939 636 GFNSARICFTCHNFEYQGTAPASDLA-----SCGLDVHQLDRP---DRMQDNAHGRI-NVVKGAIVYSNIVTTVSPTYAQ 706 (977)
T ss_pred cCCCCcEEEEeCCCcCCCcCCHHHHH-----HcCCCHHHccCh---hhhhhccCCch-HHHHHHHHhCCeeEeeeHHHHH
Confidence 2457899999964311100 00000 00000 00000 00000011111 1345556679999999999999
Q ss_pred HHHHHhCC---------CCceEEEcCCCCCCCCccCCCC-----------------C---------C---CCCcEEEEEc
Q 016535 235 HIEKLWGI---------PDRIKRVYPPCDTSGLQVLPLE-----------------R---------S---TEYPAIISVA 276 (388)
Q Consensus 235 ~l~~~~~~---------~~~~~vi~ngvd~~~~~~~~~~-----------------~---------~---~~~~~il~vg 276 (388)
.+...++. ..++.+|+||+|++.+.|.... . . .+.+.|++||
T Consensus 707 EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VG 786 (977)
T PLN02939 707 EVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCIT 786 (977)
T ss_pred HHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEee
Confidence 98763321 4688999999998877653210 0 0 1347899999
Q ss_pred ccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC
Q 016535 277 QFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA 356 (388)
Q Consensus 277 rl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a 356 (388)
|+.++||++.+++|+..+.+ ++++|+++|+|++ ..+.+.+++++++++..++|.|+|..++.....+|+.|
T Consensus 787 RL~~QKGiDlLleA~~~Ll~------~dvqLVIvGdGp~---~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA 857 (977)
T PLN02939 787 RLVPQKGVHLIRHAIYKTAE------LGGQFVLLGSSPV---PHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS 857 (977)
T ss_pred cCCcccChHHHHHHHHHHhh------cCCEEEEEeCCCc---HHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC
Confidence 99999999999999998864 3799999998863 34456888999999998899999999877788999999
Q ss_pred cEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 357 VVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 357 dv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|+||+||.+|+||++++|||+||+|+|+++++
T Consensus 858 DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vG 889 (977)
T PLN02939 858 DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTG 889 (977)
T ss_pred CEEEECCCccCCcHHHHHHHHCCCCEEEecCC
Confidence 99999999999999999999999999999864
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-30 Score=249.05 Aligned_cols=317 Identities=16% Similarity=0.103 Sum_probs=191.0
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhh
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
||+++++.+|+++|.++|+-++|+++|..... .....+.... ..+..+++.+.+++... ..+........++.
T Consensus 26 GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~--~~~~~~~~~~-~~~~~~gv~v~r~~~~~----~~~~~~~~~~~~~~ 98 (439)
T TIGR02472 26 GGQTKYVLELARALARRSEVEQVDLVTRLIKD--AKVSPDYAQP-IERIAPGARIVRLPFGP----RRYLRKELLWPYLD 98 (439)
T ss_pred CCcchHHHHHHHHHHhCCCCcEEEEEeccccC--cCCCCccCCC-eeEeCCCcEEEEecCCC----CCCcChhhhhhhHH
Confidence 79999999999999999942388888864210 0000000000 11223344555543211 11111111111111
Q ss_pred HH-HHHHHHHhh--cCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhh
Q 016535 128 SV-YLSWEALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (388)
Q Consensus 128 ~~-~~~~~~l~~--~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (388)
.+ ....+.+.+ .+||+||++........ +++..++|.+.+.|..... ....+.. .......
T Consensus 99 ~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~--~~~~~~~------------~~~~~~~ 164 (439)
T TIGR02472 99 ELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGRE--KRRRLLA------------AGLKPQQ 164 (439)
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccch--hhhhccc------------CCCChhh
Confidence 11 112223443 36999997753221111 3346789999999953210 0000000 0000000
Q ss_pred hhhHHHHH-HHHHHHHHhccCCEEEECChhHHHH-HHHHhCC-CCceEEEcCCCCCCCCccCCCCC--------------
Q 016535 203 CKIVYYTF-FSWMYGLVGSCADLAMVNSSWTQSH-IEKLWGI-PDRIKRVYPPCDTSGLQVLPLER-------------- 265 (388)
Q Consensus 203 ~~~~~~~~-~~~~~~~~~~~a~~ii~~S~~~~~~-l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~-------------- 265 (388)
....+... ....++..++.+|.++++|+...+. +....+. +.++.+||||+|++.|.+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~ 244 (439)
T TIGR02472 165 IEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLK 244 (439)
T ss_pred hhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhcc
Confidence 11111100 0114678889999999998764433 3332222 46899999999988776532110
Q ss_pred CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCcc-----HHHHHHHHHHHHhcCCCCcEEE
Q 016535 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD-----EERLQSLKDKSIELKVDGNVEF 340 (388)
Q Consensus 266 ~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~-----~~~~~~l~~~~~~~~l~~~V~~ 340 (388)
.++...++++||+.+.||++.+++|++.+..... .+++. +++|++++.+. .++.+++.++++++++.++|+|
T Consensus 245 ~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~--~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f 321 (439)
T TIGR02472 245 DPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQE--MANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAY 321 (439)
T ss_pred ccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhh--hccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEe
Confidence 1345789999999999999999999986432110 03333 35677654321 1344567778899999999999
Q ss_pred ccCCCHHHHHHHHHhC----cEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 341 YKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 341 ~g~v~~~~l~~~~~~a----dv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+|+++++++.++|+.| |++|+||.+|+||++++||||||+|||+|+.+
T Consensus 322 ~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g 373 (439)
T TIGR02472 322 PKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG 373 (439)
T ss_pred cCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC
Confidence 9999999999999987 99999999999999999999999999999864
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-30 Score=241.97 Aligned_cols=291 Identities=15% Similarity=0.074 Sum_probs=192.6
Q ss_pred eEEEecc--ccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 36 SVAFFHP--NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 36 ~I~~~~p--~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
||+++.. +...+||+++++.+++++|.++| |+|++++........ .....++.+..++...
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~-----------~~~~~~i~~~~~~~~~---- 63 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK-----------ETEYNGVRLIHIPAPE---- 63 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc-----------ccccCCceEEEcCCCC----
Confidence 4677744 23456799999999999999999 778888865421110 0011222333322211
Q ss_pred CCCCceehhhhhhhHHHHHHHHH-hhcCCcEEEecCCcccc-cchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 114 STYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYAFT-YPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~Div~~~~~~~~~-~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
...+ ..........+..+ .+.++|++|........ ..+++..+.|.+++.|.......
T Consensus 64 --~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~--------------- 123 (363)
T cd04955 64 --IGGL---GTIIYDILAILHALFVKRDIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRA--------------- 123 (363)
T ss_pred --ccch---hhhHHHHHHHHHHHhccCCeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeec---------------
Confidence 0000 01111111112222 24456666654332111 12344558899988885331100
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCcc-CCC---CCCC
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-LPL---ERST 267 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~-~~~---~~~~ 267 (388)
.+....++.+.+.++...+.+|.++++|+..++.+++.++... .++|||+|...+.+ ... ....
T Consensus 124 ----------~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~--~~i~ngv~~~~~~~~~~~~~~~~~~ 191 (363)
T cd04955 124 ----------KWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYGRDS--TYIPYGADHVVSSEEDEILKKYGLE 191 (363)
T ss_pred ----------ccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcCCCC--eeeCCCcChhhcchhhhhHHhcCCC
Confidence 0001122344456778889999999999999999987777533 79999999766543 111 0112
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHH-hcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI-ELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~-~~~l~~~V~~~g~v~~ 346 (388)
+...++++||+.+.||++.+++|++++. .+++|+++|+++... .+.+.++ +++..++|+|+|++++
T Consensus 192 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~-------~~~~l~ivG~~~~~~------~~~~~~~~~~~~~~~V~~~g~~~~ 258 (363)
T cd04955 192 PGRYYLLVGRIVPENNIDDLIEAFSKSN-------SGKKLVIVGNADHNT------PYGKLLKEKAAADPRIIFVGPIYD 258 (363)
T ss_pred CCcEEEEEecccccCCHHHHHHHHHhhc-------cCceEEEEcCCCCcc------hHHHHHHHHhCCCCcEEEccccCh
Confidence 3456899999999999999999999872 379999999885443 3333333 5677789999999999
Q ss_pred HHHHHHHHhCcEEEEcCCC-CCCChHHHHHHHhCCceEeeCCC
Q 016535 347 RDLVKLLGGAVVGIHSMID-EHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~-E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.++|+.||++++||.. |+||++++|||+||+|||+++.+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~ 301 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNP 301 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCC
Confidence 9999999999999999988 99999999999999999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-32 Score=238.09 Aligned_cols=289 Identities=17% Similarity=0.185 Sum_probs=218.1
Q ss_pred EeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCC-CeeEEeccccccccCCCC
Q 016535 39 FFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP-PKVVHLYRRKWIEESTYP 117 (388)
Q Consensus 39 ~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~ 117 (388)
|+.|.. ||.|..++.+.+.|-+.| |.|+++|..+. ++.+++...+ .++++++.........++
T Consensus 9 ff~P~~---ggveshiy~lSq~li~lg--hkVvvithayg-----------~r~girylt~glkVyylp~~v~~n~tT~p 72 (426)
T KOG1111|consen 9 FFYPST---GGVESHIYALSQCLIRLG--HKVVVITHAYG-----------NRVGIRYLTNGLKVYYLPAVVGYNQTTFP 72 (426)
T ss_pred ccccCC---CChhhhHHHhhcchhhcC--CeEEEEecccc-----------CccceeeecCCceEEEEeeeeeecccchh
Confidence 555666 899999999999999999 89999998751 2235666554 477776553333322222
Q ss_pred ceehhhhhhhHHHHHHHHHhhcCCcEEEecCCccccc----chhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCcc
Q 016535 118 RFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY----PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (388)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~----~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (388)
.+ +..+-.....+.+.+..++|.++++.... ..++.+|.+++++-|.-.-..+.
T Consensus 73 tv------~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~---------------- 130 (426)
T KOG1111|consen 73 TV------FSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADI---------------- 130 (426)
T ss_pred hh------hccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccccccch----------------
Confidence 21 11111112233455788888776533211 13456789999988853211111
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCCC-CCCcE
Q 016535 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERS-TEYPA 271 (388)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~-~~~~~ 271 (388)
-...++.+..+.+...|.+||+|++.++...-+... ++++.+|||.++...|.|.+.... .+...
T Consensus 131 -------------~si~~n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~S~~i~~ 197 (426)
T KOG1111|consen 131 -------------GSILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKPSADIIT 197 (426)
T ss_pred -------------hhhhhcceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccccCCCCeeE
Confidence 112233456777889999999999998875433333 689999999999999988544433 33478
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHH
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~ 351 (388)
++.++|+.++||+|.+++++..+.+++ |+++|+++|+||.+. .+++..+++.+.++|.++|.++++++.+
T Consensus 198 ivv~sRLvyrKGiDll~~iIp~vc~~~----p~vrfii~GDGPk~i------~lee~lEk~~l~~rV~~lG~v~h~~Vr~ 267 (426)
T KOG1111|consen 198 IVVASRLVYRKGIDLLLEIIPSVCDKH----PEVRFIIIGDGPKRI------DLEEMLEKLFLQDRVVMLGTVPHDRVRD 267 (426)
T ss_pred EEEEeeeeeccchHHHHHHHHHHHhcC----CCeeEEEecCCcccc------hHHHHHHHhhccCceEEecccchHHHHH
Confidence 999999999999999999999999997 999999999999887 8999999999999999999999999999
Q ss_pred HHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 352 ~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.|...|+|++||..|.|+++++|||+||+|||+++.|
T Consensus 268 vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVG 304 (426)
T KOG1111|consen 268 VLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVG 304 (426)
T ss_pred HHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecC
Confidence 9999999999999999999999999999999999864
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-30 Score=250.04 Aligned_cols=322 Identities=14% Similarity=0.045 Sum_probs=201.4
Q ss_pred ceEEEec----cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhh---hce---------ecCC
Q 016535 35 TSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDR---FGV---------ELLH 98 (388)
Q Consensus 35 ~~I~~~~----p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~---~~i---------~~~~ 98 (388)
|+|+++. |....| |.+.++..|+++|.++| |+|.|+++.++. +.....+. ... ...+
T Consensus 1 m~i~~vs~e~~P~~k~G-Gl~~~v~~L~~~L~~~G--~~V~v~~p~y~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (466)
T PRK00654 1 MKILFVASECAPLIKTG-GLGDVVGALPKALAALG--HDVRVLLPGYPA----IREKLRDAQVVGRLDLFTVLFGHLEGD 73 (466)
T ss_pred CeEEEEEcccccCcccC-cHHHHHHHHHHHHHHCC--CcEEEEecCCcc----hhhhhcCceEEEEeeeEEEEEEeEEcC
Confidence 6788765 444445 99999999999999999 888899876521 11111000 000 0123
Q ss_pred CCeeEEeccccccccC-CCCceehhhhhhhHHHHHHHHHh--hcCCcEEEecCCcccccc-hhh-h-----cCCeEEEEE
Q 016535 99 PPKVVHLYRRKWIEES-TYPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP-LAR-I-----FGCRVICYT 168 (388)
Q Consensus 99 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~~-~~~-~-----~~~~~i~~~ 168 (388)
+++++.+....+..+. .+.......++..........+. ..+||+||++.+.....+ +++ . .++|.++++
T Consensus 74 gv~v~~v~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~Ti 153 (466)
T PRK00654 74 GVPVYLIDAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTI 153 (466)
T ss_pred CceEEEEeCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEc
Confidence 4555655443322211 12111111111100111122222 248999998865433333 222 2 268999999
Q ss_pred eccccch----hhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-hC--
Q 016535 169 HYPTISL----DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WG-- 241 (388)
Q Consensus 169 h~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~-~~-- 241 (388)
|.....- +...... -.. . .. ............+.+..++.+|.++++|+..++++.+. ++
T Consensus 154 H~~~~~g~~~~~~~~~~~-------~~~----~-~~-~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~g 220 (466)
T PRK00654 154 HNLAYQGLFPAEILGELG-------LPA----E-AF-HLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYG 220 (466)
T ss_pred CCCcCCCcCCHHHHHHcC-------CCh----H-Hc-CchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcC
Confidence 9754210 0000000 000 0 00 00000000001235667889999999999999888652 11
Q ss_pred -------CCCceEEEcCCCCCCCCccCCCC---------------------------CCCCCcEEEEEcccCCCCChHHH
Q 016535 242 -------IPDRIKRVYPPCDTSGLQVLPLE---------------------------RSTEYPAIISVAQFRPEKAHPLQ 287 (388)
Q Consensus 242 -------~~~~~~vi~ngvd~~~~~~~~~~---------------------------~~~~~~~il~vgrl~~~Kg~~~l 287 (388)
...++.+|+||+|.+.+.+.... ...+.+.++++||+.++||++.+
T Consensus 221 l~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~l 300 (466)
T PRK00654 221 LEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLV 300 (466)
T ss_pred hHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHH
Confidence 14689999999999877653210 01245789999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCC
Q 016535 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367 (388)
Q Consensus 288 l~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~ 367 (388)
++|++++.++ +++|+++|+| +..+.+++++++++++ +++.+.+..+.+++..+|++||++|+||.+|+
T Consensus 301 i~a~~~l~~~------~~~lvivG~g----~~~~~~~l~~l~~~~~--~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~ 368 (466)
T PRK00654 301 LEALPELLEQ------GGQLVLLGTG----DPELEEAFRALAARYP--GKVGVQIGYDEALAHRIYAGADMFLMPSRFEP 368 (466)
T ss_pred HHHHHHHHhc------CCEEEEEecC----cHHHHHHHHHHHHHCC--CcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCC
Confidence 9999998653 7999999987 4445668888888876 45765433466667899999999999999999
Q ss_pred CChHHHHHHHhCCceEeeCCC
Q 016535 368 FGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 368 ~~~~vlEAma~G~PVI~~~~~ 388 (388)
||++++|||+||+|+|+++.+
T Consensus 369 ~gl~~lEAma~G~p~V~~~~g 389 (466)
T PRK00654 369 CGLTQLYALRYGTLPIVRRTG 389 (466)
T ss_pred chHHHHHHHHCCCCEEEeCCC
Confidence 999999999999999999864
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.9e-30 Score=242.27 Aligned_cols=302 Identities=19% Similarity=0.133 Sum_probs=203.6
Q ss_pred CCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhh
Q 016535 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (388)
Q Consensus 47 gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (388)
.||+++++.+++++|.++| |+|++++......... .....+++.+.++.............+....
T Consensus 20 ~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (398)
T cd03800 20 TGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP---------IVELAPGVRVVRVPAGPAEYLPKEELWPYLD--- 85 (398)
T ss_pred CCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC---------ccccccceEEEecccccccCCChhhcchhHH---
Confidence 3699999999999999999 8888887653211110 0111122233332211100000000000110
Q ss_pred hHHHHHHHHHhhc--CCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhh
Q 016535 127 GSVYLSWEALCKF--TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (388)
Q Consensus 127 ~~~~~~~~~l~~~--~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (388)
.........+.+. +||+||.+........ +++..++|.+.+.|......... . . ..
T Consensus 86 ~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~--------------~-~-----~~ 145 (398)
T cd03800 86 EFADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRH--------------L-G-----AA 145 (398)
T ss_pred HHHHHHHHHHHhcCCCccEEEEecCccchHHHHHHhhcCCceEEEeecccccCCcc--------------c-c-----cc
Confidence 1111222334455 8999986643222112 44567889888888532100000 0 0 00
Q ss_pred hhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCC--------CCCCCCcEEE
Q 016535 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--------ERSTEYPAII 273 (388)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~--------~~~~~~~~il 273 (388)
. ..........++..++.+|.++++|+..++.+.+.+.. ..++.+++||+|.+.+.+... ....+.++++
T Consensus 146 ~-~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (398)
T cd03800 146 D-TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRIL 224 (398)
T ss_pred c-ccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEE
Confidence 0 00111222356778899999999999999999887654 345889999999876654322 1124568999
Q ss_pred EEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHH
Q 016535 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353 (388)
Q Consensus 274 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~ 353 (388)
|+||+.+.||++.+++|+..+.++. ++++++++|++.......+...+++.++++++.+++.|+|+++.+++.++|
T Consensus 225 ~~gr~~~~k~~~~ll~a~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 225 AVGRLDPRKGIDTLIRAYAELPELR----ERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred EEcccccccCHHHHHHHHHHHHHhC----CCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999998774 789999999986654444456678888999998999999999999999999
Q ss_pred HhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 354 ~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+.||++++||..|++|++++|||++|+|||+++.
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~ 334 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMACGLPVVATAV 334 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhcCCCEEECCC
Confidence 9999999999999999999999999999999975
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-30 Score=238.16 Aligned_cols=287 Identities=16% Similarity=0.098 Sum_probs=198.3
Q ss_pred eEEEeccccCC-CCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p~~~~-gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+.+.++... .||.++++.+++++|.++| ++|++++........ .... ....+..+... ....
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~---~~~~--------~~~~~~~~~~~--~~~~ 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR---DEER--------NGHRVIRAPSL--LNVA 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch---hhhc--------cCceEEEeecc--cccc
Confidence 45555544432 5699999999999999999 777777765421111 0000 11112222110 0000
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
.... . ......+. +...++|++|.+........... ..++|.+.++|......
T Consensus 66 ~~~~---~----~~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------------- 120 (357)
T cd03795 66 STPF---S----PSFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVKQ----------------- 120 (357)
T ss_pred cccc---c----HHHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhhcc-----------------
Confidence 0000 0 00111111 45678999877655433322221 34778888888522100
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC------CCC
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERS 266 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------~~~ 266 (388)
......+.++++..++.+|.+++.|+...+.+...+....++.++|||+|...+.+... ...
T Consensus 121 ------------~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~ 188 (357)
T cd03795 121 ------------KLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRA 188 (357)
T ss_pred ------------chhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHhhcCC
Confidence 01223444567778899999999999999988776554578999999999876654332 122
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
.+++.++|+||+.+.||++.+++|++++ .+++++++|+|+.. +.+++.+++.+..++|.|+|++++
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l--------~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~V~~~g~v~~ 254 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAAL--------PDAPLVIVGEGPLE------AELEALAAALGLLDRVRFLGRLDD 254 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhc--------cCcEEEEEeCChhH------HHHHHHHHhcCCcceEEEcCCCCH
Confidence 4568999999999999999999999988 37999999976433 378888888889899999999999
Q ss_pred HHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeCCC
Q 016535 347 RDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.++|+.||++++||. .|++|++++|||+||+|||+++.+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~ 298 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIG 298 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCC
Confidence 999999999999999985 599999999999999999999853
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9e-30 Score=238.16 Aligned_cols=279 Identities=18% Similarity=0.154 Sum_probs=199.0
Q ss_pred eccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCce
Q 016535 40 FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRF 119 (388)
Q Consensus 40 ~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (388)
+.|.+..| |+|+++.+++++|.++| ++|++++.... ...... ..+++ +..+.... ... +
T Consensus 3 ~~~~~~~g-G~e~~~~~l~~~L~~~g--~~v~v~~~~~~-----~~~~~~-~~~~~------~~~~~~~~---~~~---~ 61 (355)
T cd03819 3 VLPALESG-GVERGTLELARALVERG--HRSLVASAGGR-----LVAELE-AEGSR------HIKLPFIS---KNP---L 61 (355)
T ss_pred cchhhccC-cHHHHHHHHHHHHHHcC--CEEEEEcCCCc-----hHHHHH-hcCCe------EEEccccc---cch---h
Confidence 34666655 99999999999999999 88888876431 111111 11221 11111100 000 0
Q ss_pred ehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCcccccc
Q 016535 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197 (388)
Q Consensus 120 ~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (388)
..+.......+.+.+.+||+||.++..+.... ..+..++|.+.++|.....
T Consensus 62 ----~~~~~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~----------------------- 114 (355)
T cd03819 62 ----RILLNVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSV----------------------- 114 (355)
T ss_pred ----hhHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhh-----------------------
Confidence 11112223344567789999987754332222 2345689999888852200
Q ss_pred chhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCC------------
Q 016535 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------------ 264 (388)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~------------ 264 (388)
.. +.+...+.+|.++++|+..++.+.+.++. ..++.++|||+|...+.+....
T Consensus 115 ---~~-----------~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~ 180 (355)
T cd03819 115 ---NF-----------RYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP 180 (355)
T ss_pred ---HH-----------HHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcC
Confidence 00 12334567999999999999999876665 4689999999998777543221
Q ss_pred CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 265 ~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
..++.+.++++||+.++||++.+++++..++++. ++++++++|.++..+ .+.+.+.+.++++++.++|.|+|+
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~----~~~~l~ivG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~g~- 253 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEVFIEALARLKKDD----PDVHLLIVGDAQGRR--FYYAELLELIKRLGLQDRVTFVGH- 253 (355)
T ss_pred CCCCceEEEEeeccccccCHHHHHHHHHHHHhcC----CCeEEEEEECCcccc--hHHHHHHHHHHHcCCcceEEEcCC-
Confidence 1245678999999999999999999999998874 689999999876432 445667778888888889999999
Q ss_pred CHHHHHHHHHhCcEEEEcC-CCCCCChHHHHHHHhCCceEeeCCC
Q 016535 345 LYRDLVKLLGGAVVGIHSM-IDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps-~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.+++.++|+.||++++|| ..|++|++++|||+||+|||++|.+
T Consensus 254 -~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 254 -CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred -cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 489999999999999999 8999999999999999999999853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=254.98 Aligned_cols=308 Identities=14% Similarity=0.068 Sum_probs=202.2
Q ss_pred CccceEEEec----cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh--hhc---------eec
Q 016535 32 NRTTSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD--RFG---------VEL 96 (388)
Q Consensus 32 ~~~~~I~~~~----p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~--~~~---------i~~ 96 (388)
...|+|+++. |....| |.+.++..|+++|++.| |+|.|+++.++............ .+. ...
T Consensus 585 ~~pM~Il~VSsE~~P~aKvG-GLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 661 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVG-GLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGK 661 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcC-cHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEE
Confidence 3569999875 555555 99999999999999999 88999998763210000000000 000 001
Q ss_pred CCCCeeEEeccc-ccccc-CCCCceehhhhhhhHHHHHHHHHh--hcCCcEEEecCCcccccc-hhh-------hcCCeE
Q 016535 97 LHPPKVVHLYRR-KWIEE-STYPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP-LAR-------IFGCRV 164 (388)
Q Consensus 97 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~~-~~~-------~~~~~~ 164 (388)
.+++.++.+... .+..+ ..+....-..++...-......+. ..+|||||++.......+ +++ ..++|+
T Consensus 662 ~~GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~ 741 (1036)
T PLN02316 662 VEGLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARV 741 (1036)
T ss_pred ECCcEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCE
Confidence 123334443321 11111 011111111111111111122222 358999998865333333 222 235789
Q ss_pred EEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC--
Q 016535 165 ICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-- 242 (388)
Q Consensus 165 i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-- 242 (388)
++++|...+. . .+.+..+..+|.++++|+..++.+...+..
T Consensus 742 V~TiHnl~~~----------------------------------~---n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~ 784 (1036)
T PLN02316 742 VFTIHNLEFG----------------------------------A---NHIGKAMAYADKATTVSPTYSREVSGNSAIAP 784 (1036)
T ss_pred EEEeCCcccc----------------------------------h---hHHHHHHHHCCEEEeCCHHHHHHHHhccCccc
Confidence 9999963310 0 012345577999999999999998765432
Q ss_pred -CCceEEEcCCCCCCCCccCCC-----------------C-C----------CCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 243 -PDRIKRVYPPCDTSGLQVLPL-----------------E-R----------STEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 243 -~~~~~vi~ngvd~~~~~~~~~-----------------~-~----------~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
..++.+|+||+|++.+.+... . . ..+.+.+++|||+.++||++.+++|+..
T Consensus 785 ~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ 864 (1036)
T PLN02316 785 HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWR 864 (1036)
T ss_pred ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHH
Confidence 368999999999876654210 0 0 0235789999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC--CCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChH
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV--DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGIS 371 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~ 371 (388)
+.+. +++|+++|+|+ +.++.+.++++++++++ +++|.|.|..+......+|+.||+||+||.+|+||++
T Consensus 865 ll~~------~~qlVIvG~Gp---d~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLv 935 (1036)
T PLN02316 865 TLER------NGQVVLLGSAP---DPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLT 935 (1036)
T ss_pred Hhhc------CcEEEEEeCCC---CHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHH
Confidence 8653 79999999986 33456788899998865 5789999887554445899999999999999999999
Q ss_pred HHHHHHhCCceEeeCCC
Q 016535 372 VVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 372 vlEAma~G~PVI~~~~~ 388 (388)
.+|||+||+|+|+++++
T Consensus 936 qLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 936 QLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HHHHHHcCCCeEEEcCC
Confidence 99999999999999864
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=242.85 Aligned_cols=309 Identities=13% Similarity=0.130 Sum_probs=196.3
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccc
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (388)
++++|+.+.-.. +|.+..+.+++++|+++| |+|++++...... . .+.... .++.++.+...+
T Consensus 2 ~~~~~~~~~~~~---~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~-~---~~~~~~------~~v~~~~~~~~~--- 63 (415)
T cd03816 2 KRKRVCVLVLGD---IGRSPRMQYHALSLAKHG--WKVDLVGYLETPP-H---DEILSN------PNITIHPLPPPP--- 63 (415)
T ss_pred CccEEEEEEecc---cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCC-C---HHHhcC------CCEEEEECCCCc---
Confidence 456666664433 366666788999999999 7888887653111 1 111111 122333333211
Q ss_pred cCCCCceehhhhh----hhHHHH-HHHHHhhcCCcEEEecCCccccc---c--hhhhcCCeEEEEEeccccchhhhhhhh
Q 016535 113 ESTYPRFTMIGQS----FGSVYL-SWEALCKFTPLYYFDTSGYAFTY---P--LARIFGCRVICYTHYPTISLDMISRVR 182 (388)
Q Consensus 113 ~~~~~~~~~~~~~----~~~~~~-~~~~l~~~~~Div~~~~~~~~~~---~--~~~~~~~~~i~~~h~p~~~~~~~~~~~ 182 (388)
...........+ +...+. .+.++...+||+||.+....... . +.+..++|.++++|..... ... ..
T Consensus 64 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~--~~~-~~ 139 (415)
T cd03816 64 -QRLNKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYT--ILA-LK 139 (415)
T ss_pred -cccccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHH--HHh-cc
Confidence 001111111111 111111 12234556899988665322211 1 2345789999988853211 000 00
Q ss_pred cCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC
Q 016535 183 EGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP 262 (388)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~ 262 (388)
+ . ......+.+.+++++.++.+|.++++|+.+++.+.+......++.+||||.+ ..|.+.+
T Consensus 140 -----~------------~-~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~-~~f~p~~ 200 (415)
T cd03816 140 -----L------------G-ENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPP-EQFRPLP 200 (415)
T ss_pred -----c------------C-CCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCCH-HHceeCc
Confidence 0 0 0112234666778999999999999999999999874333688999999854 3333211
Q ss_pred CC-------------------------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcC--CCCCcEEEEEeCCCC
Q 016535 263 LE-------------------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA--DLPRPRLQFVGSCRN 315 (388)
Q Consensus 263 ~~-------------------------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~--~~~~~~l~ivG~~~~ 315 (388)
.. ..++...++++||+.+.||++.+++|++.+++.... ..|+++|+++|+|+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~ 280 (415)
T cd03816 201 LEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPL 280 (415)
T ss_pred HHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCcc
Confidence 00 012335778899999999999999999999763210 126899999998764
Q ss_pred CccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcC---CCCCCChHHHHHHHhCCceEeeCCC
Q 016535 316 KSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSM---IDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps---~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.+ +++++++++++++.+.+.|+++.+++.++|+.||+++.|+ ..|++|++++||||||+|||+++.+
T Consensus 281 ~~------~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~ 350 (415)
T cd03816 281 KE------KYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK 350 (415)
T ss_pred HH------HHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC
Confidence 43 8999999999974444557899999999999999999753 3578999999999999999999863
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=237.37 Aligned_cols=301 Identities=20% Similarity=0.165 Sum_probs=200.5
Q ss_pred eEEEeccccC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p~~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+++.+... ..||+++++.+++++|.+.| ++|++++........ ... . ... ..........
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~--~~~-~--~~~------~~~~~~~~~~---- 63 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLG--HEVTVATTDAGGDPL--LVA-L--NGV------PVKLFSINVA---- 63 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcC--CcEEEEecCCCCccc--hhh-c--cCc------eeeecccchh----
Confidence 5788877763 56699999999999999999 778888765421111 000 0 000 0000000000
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCccccc-c---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccC
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY-P---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~-~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (388)
.........+......+......++|+++.+..+.... . .++..++|.+++.|........
T Consensus 64 --~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------- 128 (375)
T cd03821 64 --YGLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL------------- 128 (375)
T ss_pred --hhhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc-------------
Confidence 00000000011111222233456899887665322221 2 2335688998888853210000
Q ss_pred CccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC-------
Q 016535 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------- 263 (388)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------- 263 (388)
. .......... ...++...+.++.+++.|+........... ..++.++|||+|.+.+.....
T Consensus 129 ----~----~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 197 (375)
T cd03821 129 ----P----HKALKKRLAW--FLFERRLLQAAAAVHATSEQEAAEIRRLGL-KAPIAVIPNGVDIPPFAALPSRGRRRKF 197 (375)
T ss_pred ----c----cchhhhHHHH--HHHHHHHHhcCCEEEECCHHHHHHHHhhCC-cccEEEcCCCcChhccCcchhhhhhhhc
Confidence 0 0111111111 124567778899999999887777765433 568999999999877654321
Q ss_pred CCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 264 ~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
....++.+++++||+.+.||++.+++|+..+.++. ++++++++|.+.. .+...++..++++++.++|+|+|+
T Consensus 198 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~----~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~~v~~~g~ 269 (375)
T cd03821 198 PILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERF----PDWHLVIAGPDEG----GYRAELKQIAAALGLEDRVTFTGM 269 (375)
T ss_pred cCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhc----CCeEEEEECCCCc----chHHHHHHHHHhcCccceEEEcCC
Confidence 12245689999999999999999999999998875 7999999998733 334456666688899999999999
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
++++++.++|+.||++++||..|+||++++|||+||+|||+++.
T Consensus 270 ~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 313 (375)
T cd03821 270 LYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDK 313 (375)
T ss_pred CChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCC
Confidence 99999999999999999999999999999999999999999985
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=245.68 Aligned_cols=326 Identities=15% Similarity=0.082 Sum_probs=206.0
Q ss_pred ceEEEeccc----cCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh------hhce----------
Q 016535 35 TSVAFFHPN----TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD------RFGV---------- 94 (388)
Q Consensus 35 ~~I~~~~p~----~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~------~~~i---------- 94 (388)
|+|+++.+. .. .||.+.++..|+++|+++| |+|.|+++.+.. ...+..+ ...+
T Consensus 1 m~i~~vs~E~~P~~k-~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (473)
T TIGR02095 1 MRVLFVAAEMAPFAK-TGGLADVVGALPKALAALG--HDVRVLLPAYGC----IEDEVDDQVKVVELVDLSVGPRTLYVK 73 (473)
T ss_pred CeEEEEEeccccccC-cCcHHHHHHHHHHHHHHcC--CeEEEEecCCcC----hhhhhccCeEEEEEEEEeecCceeEEE
Confidence 678887544 33 4599999999999999999 888899877632 1111100 0000
Q ss_pred ---ecCCCCeeEEecccccccc--CCCC--ceehhhhhhhHHHHHHHHHh--hcCCcEEEecCCcccccc-hh-hhcC--
Q 016535 95 ---ELLHPPKVVHLYRRKWIEE--STYP--RFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP-LA-RIFG-- 161 (388)
Q Consensus 95 ---~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~~-~~-~~~~-- 161 (388)
...+++.++.+.......+ ..+. ......++..........+. ..+||+||++.+.....+ ++ +..+
T Consensus 74 ~~~~~~~~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~ 153 (473)
T TIGR02095 74 VFEGVVEGVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPN 153 (473)
T ss_pred EEEEEECCceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCC
Confidence 1113445555443322222 1221 11111111111111222232 358999998865443333 23 2333
Q ss_pred -CeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-
Q 016535 162 -CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL- 239 (388)
Q Consensus 162 -~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~- 239 (388)
+|.++++|.....-......... .... ..........+.. .-.+.+..++.+|.++++|+..++.+.+.
T Consensus 154 ~~~~v~TiH~~~~~g~~~~~~~~~---~~~~-----~~~~~~~~~~~~~-~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~ 224 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSE---LGLP-----PEYFHMEGLEFYG-RVNFLKGGIVYADRVTTVSPTYAREILTPE 224 (473)
T ss_pred CCCEEEEcCCCccCCcCCHHHHHH---cCCC-----hHHcCchhhhcCC-chHHHHHHHHhCCcCeecCHhHHHHhcCCc
Confidence 89999999754210000000000 0000 0000000000000 11246777899999999999999888642
Q ss_pred hC---------CCCceEEEcCCCCCCCCccCCCC----------------------------CCCCCcEEEEEcccCCCC
Q 016535 240 WG---------IPDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEK 282 (388)
Q Consensus 240 ~~---------~~~~~~vi~ngvd~~~~~~~~~~----------------------------~~~~~~~il~vgrl~~~K 282 (388)
++ .+.++.+|+||+|.+.+.+.... ...+.+.++++||+.++|
T Consensus 225 ~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~K 304 (473)
T TIGR02095 225 FGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQK 304 (473)
T ss_pred CCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCcccc
Confidence 11 13589999999998877643110 012568899999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEc
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHS 362 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~p 362 (388)
|++.+++|++.+.++ +++|+++|.| +.++.+++++++++++ +++.+.+..+.+++..+|++||++++|
T Consensus 305 g~~~li~a~~~l~~~------~~~lvi~G~g----~~~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~p 372 (473)
T TIGR02095 305 GVDLLLAALPELLEL------GGQLVVLGTG----DPELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMP 372 (473)
T ss_pred ChHHHHHHHHHHHHc------CcEEEEECCC----CHHHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeC
Confidence 999999999999754 6999999987 3445567888887764 579998888888899999999999999
Q ss_pred CCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 363 MIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 363 s~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|.+|+||++++|||+||+|||+++.+
T Consensus 373 S~~E~~gl~~lEAma~G~pvI~s~~g 398 (473)
T TIGR02095 373 SRFEPCGLTQLYAMRYGTVPIVRRTG 398 (473)
T ss_pred CCcCCcHHHHHHHHHCCCCeEEccCC
Confidence 99999999999999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=238.67 Aligned_cols=292 Identities=21% Similarity=0.221 Sum_probs=188.9
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++|++....||+|+++.++++.|.+. ++.+...+.... ...... .......+...+...+..
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~~----~v~~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~ 65 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPDA----DIFTLVDDPDKL-PRLLRL----------KKIRTSFIQKLPFARRRY 65 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCCC----CEEEEeecCCcc-chhhcC----------CceeechhhhchhhHhhH
Confidence 68999999987789999999999998753 333333222100 100000 000001111100000000
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCcccc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIA 195 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~ 195 (388)
..........++.+...++|+|+.++.+. ...+....+++.+.++|.|.... +.....+....
T Consensus 66 -------~~~~~~~~~~~~~~~~~~~D~v~~~~~~~-~~~~~~~~~~~~~~~~h~~~~~~------~~~~~~~~~~~--- 128 (351)
T cd03804 66 -------RKYLPLMPLAIEQFDLSGYDLVISSSHAV-AKGVITRPDQLHICYCHTPMRYA------WDLYHDYLKES--- 128 (351)
T ss_pred -------hhhCchhhHHHHhccccCCCEEEEcCcHH-hccccCCCCCcEEEEeCCchHHH------hcCchHhhhhc---
Confidence 00011111233345566899988765422 22233456788899999753110 00000000000
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEE
Q 016535 196 QSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISV 275 (388)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~v 275 (388)
..............+..+++..++++|.++++|+.+++.+.+.++. +..+++||+|.+.+.+.. ..+..++++
T Consensus 129 -~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~--~~~vi~~~~d~~~~~~~~----~~~~~il~~ 201 (351)
T cd03804 129 -GLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYGR--DATVIYPPVDTDRFTPAE----EKEDYYLSV 201 (351)
T ss_pred -ccchhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhCC--CcEEECCCCCHhhcCcCC----CCCCEEEEE
Confidence 0000111122334455567888999999999999999999887653 567899999987775432 233679999
Q ss_pred cccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh
Q 016535 276 AQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (388)
Q Consensus 276 grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ 355 (388)
|++.+.||++.+++|++.+ + ++|+++|+|++.+ .+++ +..++|+|+|+++++++.++|+.
T Consensus 202 G~~~~~K~~~~li~a~~~~--------~-~~l~ivG~g~~~~------~l~~-----~~~~~V~~~g~~~~~~~~~~~~~ 261 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL--------G-KRLVVIGDGPELD------RLRA-----KAGPNVTFLGRVSDEELRDLYAR 261 (351)
T ss_pred EcCccccChHHHHHHHHHC--------C-CcEEEEECChhHH------HHHh-----hcCCCEEEecCCCHHHHHHHHHh
Confidence 9999999999999999876 4 8999999875322 4444 34579999999999999999999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 356 adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
||++++||. |+||++++|||+||+|||+++.
T Consensus 262 ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~ 292 (351)
T cd03804 262 ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGK 292 (351)
T ss_pred CCEEEECCc-CCCCchHHHHHHcCCCEEEeCC
Confidence 999999999 9999999999999999999985
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=237.03 Aligned_cols=270 Identities=16% Similarity=0.111 Sum_probs=187.5
Q ss_pred ceEEEecccc-----CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccc
Q 016535 35 TSVAFFHPNT-----NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (388)
Q Consensus 35 ~~I~~~~p~~-----~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 109 (388)
|||+++.+.. ...||+++++.+++++|.++| |+|++++.......... ..... ...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~~---------~~~~~--------~~~ 61 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTAAPL---------VPVVP--------EPL 61 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcccce---------eeccC--------CCc
Confidence 7899987764 256699999999999999999 88888887642111000 00000 000
Q ss_pred ccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
+.. . ...............+.+.+.++|+||.+....... .++..++|.+.+.|.......
T Consensus 62 ~~~--~---~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~~~~~~~------------- 122 (335)
T cd03802 62 RLD--A---PGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHGPPDPEL------------- 122 (335)
T ss_pred ccc--c---chhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecCCCCccc-------------
Confidence 000 0 000001111222333456778999998776543322 455778899998886431000
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCC
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEY 269 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~ 269 (388)
. . ........+.+++.|+..++.+... .++.++|||+|++.+.+. ..++
T Consensus 123 -----------~-------~-----~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~~----~~~~ 171 (335)
T cd03802 123 -----------L-------K-----LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPFR----GPKG 171 (335)
T ss_pred -----------c-------h-----HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCCC----CCCC
Confidence 0 0 1223356788999999988877543 578899999998877642 1344
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcC-CCCcEEEccCCCHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK-VDGNVEFYKNLLYRD 348 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~-l~~~V~~~g~v~~~~ 348 (388)
..++++||+.+.||++.++++++. .+++++++|.+++.+ .+.+..++.. +.++|+|+|++++++
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~---------~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~v~~~G~~~~~~ 236 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARR---------AGIPLKLAGPVSDPD------YFYREIAPELLDGPDIEYLGEVGGAE 236 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHh---------cCCeEEEEeCCCCHH------HHHHHHHHhcccCCcEEEeCCCCHHH
Confidence 789999999999999999998754 389999999886443 3334333332 457999999999999
Q ss_pred HHHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeCCC
Q 016535 349 LVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 349 l~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+.++|+.+|++++||. .|+||++++||||||+|||++|.+
T Consensus 237 ~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~ 277 (335)
T cd03802 237 KAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG 277 (335)
T ss_pred HHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC
Confidence 9999999999999997 599999999999999999999864
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=239.00 Aligned_cols=296 Identities=19% Similarity=0.112 Sum_probs=203.5
Q ss_pred eEEEeccccCC--CCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 36 ~I~~~~p~~~~--gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
||++...+... +||+++++.+++++|.+.| +++++++........ ...... .... . ......
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~--~~~~~~--~~~~------~----~~~~~~ 64 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLL--LLPLRA--ALRL------L----LRLPRR 64 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccc--cccchh--cccc------c----cccccc
Confidence 46666655543 6799999999999999999 555555544311111 000000 0000 0 000000
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCcc
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (388)
..+ ...+...+.......+.++|++|.++...... +..++|.+.++|........
T Consensus 65 ~~~------~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~---~~~~~~~i~~~hd~~~~~~~---------------- 119 (365)
T cd03809 65 LLW------GLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL---RLRGVPVVVTIHDLIPLRFP---------------- 119 (365)
T ss_pred ccc------chhhHHHHHHHHHhhhcCCCeeeecccccCcc---cCCCCCEEEEeccchhhhCc----------------
Confidence 000 11111122223334557899998776533222 66789999999953210000
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCC------CCC
Q 016535 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL------ERS 266 (388)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~------~~~ 266 (388)
..........+.++++..++.+|.++++|+..++.+.+.++. ..++.+++||+|...+..... ...
T Consensus 120 -------~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
T cd03809 120 -------EYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYL 192 (365)
T ss_pred -------ccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHHHHHHhcC
Confidence 000011234445567888899999999999999999988764 468899999999877654321 222
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
.++..++++|++.+.||++.+++++..+.+.. ++++|+++|.+.... ....+..++.+..++|+++|.++.
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~----~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~g~~~~ 263 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLEAFARLPAKG----PDPKLVIVGKRGWLN-----EELLARLRELGLGDRVRFLGYVSD 263 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHHHHHHHHHhc----CCCCEEEecCCcccc-----HHHHHHHHHcCCCCeEEECCCCCh
Confidence 45689999999999999999999999998875 689999999875443 123333366788899999999999
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.++|+.||++++||..|++|++++|||++|+|||+++.+
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~ 305 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS 305 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCC
Confidence 999999999999999999999999999999999999999863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=243.81 Aligned_cols=326 Identities=15% Similarity=0.054 Sum_probs=205.4
Q ss_pred eEEEeccccC---CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhh---------------ce---
Q 016535 36 SVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRF---------------GV--- 94 (388)
Q Consensus 36 ~I~~~~p~~~---~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~---------------~i--- 94 (388)
+|+++.+... ..||.+.++..|+++|+++| |+|.|+++.++. ......... .+
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGR----ILDELRGQLLVLRLFGVPVGGRPEYVGVF 74 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcc----hhhHhccCeEEEEEEeeccCCceeEEEEE
Confidence 4666654421 34599999999999999999 889999977531 111111000 00
Q ss_pred -ecCCCCeeEEeccccccccCC------CCceehhhhhhhHHHHHHHHHhh--cCCcEEEecCCcccccc-hhh-h----
Q 016535 95 -ELLHPPKVVHLYRRKWIEEST------YPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LAR-I---- 159 (388)
Q Consensus 95 -~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~--~~~Div~~~~~~~~~~~-~~~-~---- 159 (388)
...++++++.+....+..+.. ........++..........+.+ .+||+||++.+.....+ ..+ .
T Consensus 75 ~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~ 154 (476)
T cd03791 75 ELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADP 154 (476)
T ss_pred EEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccc
Confidence 011344555554322222111 11111111111111222333443 68999998765433333 222 3
Q ss_pred --cCCeEEEEEeccccchhh-hhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHH
Q 016535 160 --FGCRVICYTHYPTISLDM-ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHI 236 (388)
Q Consensus 160 --~~~~~i~~~h~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l 236 (388)
.++|.++++|........ ......... ... . ..............+++..++.+|.++++|+..++.+
T Consensus 155 ~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~----~~~----~-~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i 225 (476)
T cd03791 155 FFKNIKTVFTIHNLAYQGVFPLEALEDLGL----PWE----E-LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREI 225 (476)
T ss_pred cCCCCCEEEEeCCCCCCCCCCHHHHHHcCC----Ccc----c-hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHh
Confidence 378999999975421100 000000000 000 0 0000000000112357788899999999999999888
Q ss_pred HHH---------hC-CCCceEEEcCCCCCCCCccCCCCC----------------------------CCCCcEEEEEccc
Q 016535 237 EKL---------WG-IPDRIKRVYPPCDTSGLQVLPLER----------------------------STEYPAIISVAQF 278 (388)
Q Consensus 237 ~~~---------~~-~~~~~~vi~ngvd~~~~~~~~~~~----------------------------~~~~~~il~vgrl 278 (388)
.+. .. ...++.+|+||+|.+.+.+..... .++.+.++|+||+
T Consensus 226 ~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl 305 (476)
T cd03791 226 LTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRL 305 (476)
T ss_pred CCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeec
Confidence 641 11 146899999999988776532110 1456889999999
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcE
Q 016535 279 RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 279 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv 358 (388)
.++||++.+++|+..+.++ +++|+++|.| +.++.+.++++++++ .+++.+.+..+.+++..+|+.||+
T Consensus 306 ~~~Kg~~~li~a~~~l~~~------~~~lvi~G~g----~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 306 TEQKGIDLLLEALPELLEL------GGQLVILGSG----DPEYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred cccccHHHHHHHHHHHHHc------CcEEEEEecC----CHHHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCE
Confidence 9999999999999999765 5999999987 445566777777765 468888777778888899999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++||.+|+||++++|||+||+|||+++.+
T Consensus 374 ~l~pS~~E~~gl~~lEAma~G~pvI~~~~g 403 (476)
T cd03791 374 FLMPSRFEPCGLTQMYAMRYGTVPIVRATG 403 (476)
T ss_pred EECCCCCCCCcHHHHHHhhCCCCCEECcCC
Confidence 999999999999999999999999999864
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=240.28 Aligned_cols=329 Identities=15% Similarity=0.045 Sum_probs=203.0
Q ss_pred ccceEEEec----cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhh--hhhcee----------c
Q 016535 33 RTTSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV--DRFGVE----------L 96 (388)
Q Consensus 33 ~~~~I~~~~----p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~--~~~~i~----------~ 96 (388)
++|+|+|+. |....| |.+-++..|.++|+++| |+|.|+++.+..-... ..... ..+... .
T Consensus 2 ~~~~il~v~~E~~p~~k~g-gl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 77 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTG-GLADVAGALPAALKAHG--VEVRTLVPGYPAVLAG-IEDAEQVHSFPDLFGGPARLLAAR 77 (485)
T ss_pred CCcEEEEEEeccccccCCC-cHHHHHHHHHHHHHHCC--CcEEEEeCCCcchhhh-hcCceEEEEEeeeCCceEEEEEEE
Confidence 569999974 777777 99999999999999999 7888888865321000 00000 001100 0
Q ss_pred CCCCeeEEeccccccccC--CCC------ceehhhhhhhHHHHHHHHH----hhcCCcEEEecCCcccccc-hhh---hc
Q 016535 97 LHPPKVVHLYRRKWIEES--TYP------RFTMIGQSFGSVYLSWEAL----CKFTPLYYFDTSGYAFTYP-LAR---IF 160 (388)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~l----~~~~~Div~~~~~~~~~~~-~~~---~~ 160 (388)
.+++.++.+....+..+. .+. +..-..++...-.....++ .+.+|||||++.+....++ +.+ ..
T Consensus 78 ~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~ 157 (485)
T PRK14099 78 AGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRP 157 (485)
T ss_pred eCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCC
Confidence 123344444332222221 111 0011111111111111222 2468999998875444444 222 23
Q ss_pred CCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHh
Q 016535 161 GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240 (388)
Q Consensus 161 ~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~ 240 (388)
++|.++++|...+........... .+ -. ......-...++.. ..+.+..++.+|.++++|+..++++.+.+
T Consensus 158 ~~~~V~TiHn~~~qg~~~~~~~~~-~~--~~-----~~~~~~~~~~~~~~-~~~~k~~i~~ad~vitVS~~~a~ei~~~~ 228 (485)
T PRK14099 158 APGTVFTIHNLAFQGQFPRELLGA-LG--LP-----PSAFSLDGVEYYGG-IGYLKAGLQLADRITTVSPTYALEIQGPE 228 (485)
T ss_pred CCCEEEeCCCCCCCCcCCHHHHHH-cC--CC-----hHHcCchhhhhCCC-ccHHHHHHHhcCeeeecChhHHHHHhccc
Confidence 578999999643211000000000 00 00 00000000000000 02467778899999999999999997532
Q ss_pred -C---------CCCceEEEcCCCCCCCCccCCCC----------------------------CCCCCcEEEEEcccCCCC
Q 016535 241 -G---------IPDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEK 282 (388)
Q Consensus 241 -~---------~~~~~~vi~ngvd~~~~~~~~~~----------------------------~~~~~~~il~vgrl~~~K 282 (388)
+ ...++.+|+||+|++.+.+.... ...+.+.++++||+.++|
T Consensus 229 ~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~K 308 (485)
T PRK14099 229 AGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQK 308 (485)
T ss_pred CCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccc
Confidence 1 14689999999998877653210 012356888999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcE-EEccCCCHHHHHHHH-HhCcEEE
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV-EFYKNLLYRDLVKLL-GGAVVGI 360 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V-~~~g~v~~~~l~~~~-~~adv~v 360 (388)
|++.+++|+..+.++ +++|+++|+| +.++.+++++++++++ +++ .++|+ ++++..+| +.||++|
T Consensus 309 G~d~Li~A~~~l~~~------~~~lvivG~G----~~~~~~~l~~l~~~~~--~~v~~~~G~--~~~l~~~~~a~aDifv 374 (485)
T PRK14099 309 GLDLLLEALPTLLGE------GAQLALLGSG----DAELEARFRAAAQAYP--GQIGVVIGY--DEALAHLIQAGADALL 374 (485)
T ss_pred cHHHHHHHHHHHHhc------CcEEEEEecC----CHHHHHHHHHHHHHCC--CCEEEEeCC--CHHHHHHHHhcCCEEE
Confidence 999999999998643 7999999987 4455668888888764 455 68898 48899887 5799999
Q ss_pred EcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 361 HSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 361 ~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+||.+|+||++++|||+||+|+|+++++
T Consensus 375 ~PS~~E~fGl~~lEAma~G~ppVvs~~G 402 (485)
T PRK14099 375 VPSRFEPCGLTQLCALRYGAVPVVARVG 402 (485)
T ss_pred ECCccCCCcHHHHHHHHCCCCcEEeCCC
Confidence 9999999999999999999988888753
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=238.54 Aligned_cols=162 Identities=15% Similarity=0.106 Sum_probs=135.2
Q ss_pred ccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC-------CCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 220 ~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~-------~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
..++.++++|++.++.+.+.++ ..++.++|||+|.+.+.+.... ...+..+++|+||+.+.||++.+++|++
T Consensus 138 ~~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 138 DKNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred ccCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 3578999999999999987655 5678999999998766542211 1124578999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEEeCCCCC---ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC-CCCC
Q 016535 293 VALRKLDADLPRPRLQFVGSCRNK---SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI-DEHF 368 (388)
Q Consensus 293 ~l~~~~~~~~~~~~l~ivG~~~~~---~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~-~E~~ 368 (388)
.+.++. |+++|+++|+++.. +..++.+++++++++++ +++.|+|.++.+++.++|+.||++|+||. .|+|
T Consensus 217 ~l~~~~----p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f 290 (380)
T PRK15484 217 KLATAH----SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAF 290 (380)
T ss_pred HHHHhC----CCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCcccc
Confidence 998775 89999999987643 22356667777877765 57999999999999999999999999996 5999
Q ss_pred ChHHHHHHHhCCceEeeCCC
Q 016535 369 GISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 369 ~~~vlEAma~G~PVI~~~~~ 388 (388)
|++++|||+||+|||+++.+
T Consensus 291 ~~~~lEAma~G~PVI~s~~g 310 (380)
T PRK15484 291 CMVAVEAMAAGKPVLASTKG 310 (380)
T ss_pred ccHHHHHHHcCCCEEEeCCC
Confidence 99999999999999999864
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=241.72 Aligned_cols=328 Identities=16% Similarity=0.102 Sum_probs=207.0
Q ss_pred ceEEEec----cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhH--HHHh--hhhhceecC---------
Q 016535 35 TSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSL--LARA--VDRFGVELL--------- 97 (388)
Q Consensus 35 ~~I~~~~----p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~--~~~~--~~~~~i~~~--------- 97 (388)
|+|+|+. |....| |.+-++..|.++|+++| |+|.|+++.+..-.... ..+. ...+.+.+.
T Consensus 6 ~~il~v~~E~~p~~k~G-gl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVS-ALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVK 82 (489)
T ss_pred cEEEEEeecchhhcccc-hHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEE
Confidence 9999974 776676 99999999999999999 88888888753111100 0000 000111111
Q ss_pred ----C--CCeeEEeccccccccC-CCCc------e-ehhhhhhhHHHHHHHHHh--hcCCcEEEecCCcccccc-hhh-h
Q 016535 98 ----H--PPKVVHLYRRKWIEES-TYPR------F-TMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP-LAR-I 159 (388)
Q Consensus 98 ----~--~~~~~~~~~~~~~~~~-~~~~------~-~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~~-~~~-~ 159 (388)
+ ++.++.+....+..+. .+.. + .-..++..........+. ..+||+||++.+.....+ +.+ .
T Consensus 83 ~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~ 162 (489)
T PRK14098 83 VTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTV 162 (489)
T ss_pred EecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHH
Confidence 0 1222322222221111 1110 0 111111111111222233 258999998865444444 222 2
Q ss_pred -------cCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhH
Q 016535 160 -------FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWT 232 (388)
Q Consensus 160 -------~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~ 232 (388)
.++|.++++|..... ..... . .+. .+....+..... .+. ....+.+..+..||.++++|+..
T Consensus 163 ~~~~~~~~~~~~V~TiHn~~~q-g~~~~-~----~~~---~~~~~~~~~~~~-~~~-~~~n~lk~~i~~ad~VitVS~~~ 231 (489)
T PRK14098 163 YADHEFFKDIKTVLTIHNVYRQ-GVLPF-K----VFQ---KLLPEEVCSGLH-REG-DEVNMLYTGVEHADLLTTTSPRY 231 (489)
T ss_pred hhhccccCCCCEEEEcCCCccc-CCCCH-H----HHH---HhCCHHhhhhhh-hcC-CcccHHHHHHHhcCcceeeCHHH
Confidence 278999999964310 00000 0 000 000000000000 000 01134677888999999999999
Q ss_pred HHHHHHH----hCC-------CCceEEEcCCCCCCCCccCCCC----------------------------CCCCCcEEE
Q 016535 233 QSHIEKL----WGI-------PDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAII 273 (388)
Q Consensus 233 ~~~l~~~----~~~-------~~~~~vi~ngvd~~~~~~~~~~----------------------------~~~~~~~il 273 (388)
++++.+. ++. ..++.+|+||+|++.+.+.... ..++.+.++
T Consensus 232 a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~ 311 (489)
T PRK14098 232 AEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVG 311 (489)
T ss_pred HHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEE
Confidence 9998752 121 4689999999999877653210 012457899
Q ss_pred EEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHH
Q 016535 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353 (388)
Q Consensus 274 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~ 353 (388)
++||+.++||++.+++|+..+.+. +++|+++|+| +.++.+++++++++++ ++|.|.|.++++++.++|
T Consensus 312 ~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~G----~~~~~~~l~~l~~~~~--~~V~~~g~~~~~~~~~~~ 379 (489)
T PRK14098 312 VIINFDDFQGAELLAESLEKLVEL------DIQLVICGSG----DKEYEKRFQDFAEEHP--EQVSVQTEFTDAFFHLAI 379 (489)
T ss_pred EeccccccCcHHHHHHHHHHHHhc------CcEEEEEeCC----CHHHHHHHHHHHHHCC--CCEEEEEecCHHHHHHHH
Confidence 999999999999999999998643 7999999987 4445668888888864 689999999999999999
Q ss_pred HhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 354 ~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++||++|+||..|+||++.+|||+||+|+|+++.+
T Consensus 380 a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~G 414 (489)
T PRK14098 380 AGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGG 414 (489)
T ss_pred HhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCC
Confidence 99999999999999999999999999999998764
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=235.46 Aligned_cols=284 Identities=16% Similarity=0.130 Sum_probs=202.6
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++.+..+. |+++.+++++++|.++| ++|++++........ .. .. ...... . ..+.
T Consensus 1 ki~~~~~~~~~--~~~~~~~~~~~~L~~~g--~~v~v~~~~~~~~~~--~~---~~-~~~~~~--~------~~~~---- 58 (355)
T cd03799 1 KIAYLVKEFPR--LSETFILREILALEAAG--HEVEIFSLRPPEDTL--VH---PE-DRAELA--R------TRYL---- 58 (355)
T ss_pred CEEEECCCCCC--cchHHHHHHHHHHHhCC--CeEEEEEecCccccc--cc---cc-cccccc--c------hHHH----
Confidence 58888887743 48899999999999999 788888765421100 00 00 000000 0 0000
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
......+.......+.+.+.++|++|.+........ ..+..+.+.+.+.|.......
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 118 (355)
T cd03799 59 ----ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS---------------- 118 (355)
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc----------------
Confidence 000111112222333456679999987755322222 222456888888885431100
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCCCCCCcE
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA 271 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~~~ 271 (388)
.. .+.++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+.......++..
T Consensus 119 ---------~~--------~~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~~~~~~~~ 181 (355)
T cd03799 119 ---------PD--------AIDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPLR 181 (355)
T ss_pred ---------Cc--------hHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccccccCCCeE
Confidence 00 0245666788999999999999999887433 57899999999987776543122245688
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHH
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~ 351 (388)
++++|++.+.||++.++++++.+.++. ++++++++|.++..+ .+++.++++++.++|.+.|+++.+++.+
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~----~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~v~~~g~~~~~~l~~ 251 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRG----IDFRLDIVGDGPLRD------ELEALIAELGLEDRVTLLGAKSQEEVRE 251 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcC----CCeEEEEEECCccHH------HHHHHHHHcCCCCeEEECCcCChHHHHH
Confidence 999999999999999999999998764 799999999875443 7888888888889999999999999999
Q ss_pred HHHhCcEEEEcCCC------CCCChHHHHHHHhCCceEeeCCC
Q 016535 352 LLGGAVVGIHSMID------EHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 352 ~~~~adv~v~ps~~------E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+|++||++++||.. |++|++++|||++|+|||+++.+
T Consensus 252 ~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~ 294 (355)
T cd03799 252 LLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS 294 (355)
T ss_pred HHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCC
Confidence 99999999999998 99999999999999999999853
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=238.43 Aligned_cols=219 Identities=20% Similarity=0.258 Sum_probs=169.2
Q ss_pred HHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHH
Q 016535 135 ALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (388)
Q Consensus 135 ~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (388)
.+++.+||+||.+.+...... +++..++|.+++.|..+....... .... .++.+.
T Consensus 77 ~~~~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~--------------------~~~~---~~~~~~ 133 (367)
T cd05844 77 LLRRHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLAL--------------------LLRS---RWALYA 133 (367)
T ss_pred HHHhhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchh--------------------hccc---chhHHH
Confidence 466789999987654322111 445778999999995432111000 0000 022334
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
.+++...+.+|.++++|+.+++.+.+......++.+++||+|.+.+.+.. ...++..++|+|++.+.||++.+++|++
T Consensus 134 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~--~~~~~~~i~~~G~~~~~K~~~~li~a~~ 211 (367)
T cd05844 134 RRRRRLARRAALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPAT--PARRPPRILFVGRFVEKKGPLLLLEAFA 211 (367)
T ss_pred HHHHHHHHhcCEEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCC--CCCCCcEEEEEEeeccccChHHHHHHHH
Confidence 45677788999999999999999987633346789999999987765432 2244578999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC------CC
Q 016535 293 VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI------DE 366 (388)
Q Consensus 293 ~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~------~E 366 (388)
.+.++. ++++|+++|.++ +.+++++.++++++.++|+|+|.++.+++.++|+.||++++||. .|
T Consensus 212 ~l~~~~----~~~~l~ivG~g~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E 281 (367)
T cd05844 212 RLARRV----PEVRLVIIGDGP------LLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAE 281 (367)
T ss_pred HHHHhC----CCeEEEEEeCch------HHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCcc
Confidence 998775 799999999653 33478889999888899999999999999999999999999996 59
Q ss_pred CCChHHHHHHHhCCceEeeCCC
Q 016535 367 HFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 367 ~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+||++++|||+||+|||+++.+
T Consensus 282 ~~~~~~~EA~a~G~PvI~s~~~ 303 (367)
T cd05844 282 GLPVVLLEAQASGVPVVATRHG 303 (367)
T ss_pred CCchHHHHHHHcCCCEEEeCCC
Confidence 9999999999999999999863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=233.92 Aligned_cols=288 Identities=22% Similarity=0.244 Sum_probs=202.8
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++.+.... ||+++++.+++++|.+.| ++|.+++........... .. ... ........ ...
T Consensus 1 kIl~~~~~~~~-gG~~~~~~~l~~~l~~~g--~~v~v~~~~~~~~~~~~~---~~--~~~---~~~~~~~~------~~~ 63 (353)
T cd03811 1 KILFVIPSLGG-GGAERVLLNLANGLDKRG--YDVTLVVLRDEGDYLELL---PS--NVK---LIPVRVLK------LKS 63 (353)
T ss_pred CeEEEeecccC-CCcchhHHHHHHHHHhcC--ceEEEEEcCCCCcccccc---cc--chh---hhceeeee------ccc
Confidence 58888888874 599999999999999999 777777765421110000 00 000 00000000 000
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCC-cccccc-hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCcc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG-YAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~-~~~~~~-~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (388)
. ..........+.+.+.+||+++.+.. ...... +....++|.+.++|........
T Consensus 64 ~-------~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------------- 120 (353)
T cd03811 64 L-------RDLLAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLELK---------------- 120 (353)
T ss_pred c-------cchhHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhhhc----------------
Confidence 0 00111222334566779999877765 221111 2222268999999964311000
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCC-----CCC
Q 016535 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-----RST 267 (388)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~-----~~~ 267 (388)
.. .... .+++..++.+|.+++.|+..++.+.+.++. ..++.++|||+|...+.+.... ...
T Consensus 121 -------~~---~~~~---~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (353)
T cd03811 121 -------RK---LRLL---LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPP 187 (353)
T ss_pred -------cc---hhHH---HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhhcCCCC
Confidence 00 0000 357778899999999999999999988775 4689999999998776544322 135
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+...++++|++.+.||++.+++|++.+.++. ++++|+++|.++..+ .+++.++++++.++|.+.|.+ +
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~----~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~v~~~g~~--~ 255 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKEG----PDARLVILGDGPLRE------ELEALAKELGLADRVHFLGFQ--S 255 (353)
T ss_pred CceEEEEEecchhhcChHHHHHHHHHhhhcC----CCceEEEEcCCccHH------HHHHHHHhcCCCccEEEeccc--C
Confidence 5689999999999999999999999998774 799999999765433 677888899998999999997 6
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++.++|+.||++++||..|++|++++|||++|+|||++|.+
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~ 296 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP 296 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC
Confidence 78999999999999999999999999999999999999864
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=251.26 Aligned_cols=339 Identities=14% Similarity=0.102 Sum_probs=213.3
Q ss_pred cCccceEEEecccc------------CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCc-h-h--HHHHhh-----
Q 016535 31 RNRTTSVAFFHPNT------------NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFP-D-S--LLARAV----- 89 (388)
Q Consensus 31 ~~~~~~I~~~~p~~------------~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~-~-~--~~~~~~----- 89 (388)
+.++|.|+++.+.- ...||...++.+|+++|.+.|.-++|.++|.....+. . . -..+..
T Consensus 166 ~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~ 245 (1050)
T TIGR02468 166 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSS 245 (1050)
T ss_pred ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccccc
Confidence 45678888874221 1236889999999999999864458899987542110 0 0 000000
Q ss_pred hh--hceecCCCCeeEEecccc---ccccC-CCCceehhhhhhhHHHHHH-HHH-h------hcCCcEEEecCCcccccc
Q 016535 90 DR--FGVELLHPPKVVHLYRRK---WIEES-TYPRFTMIGQSFGSVYLSW-EAL-C------KFTPLYYFDTSGYAFTYP 155 (388)
Q Consensus 90 ~~--~~i~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~-~~l-~------~~~~Div~~~~~~~~~~~ 155 (388)
+. ......++..+++++-++ +++.. .|+++..+...+....... +.+ . ...||+||.+........
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa 325 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSA 325 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHH
Confidence 00 011123345555654321 22221 2333322222221111100 000 1 114999997754332222
Q ss_pred --hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccc-hhhhhhhHH---HHHHHHHHHHHhccCCEEEECC
Q 016535 156 --LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSN-WLSQCKIVY---YTFFSWMYGLVGSCADLAMVNS 229 (388)
Q Consensus 156 --~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~a~~ii~~S 229 (388)
+++..++|.+++.|... ..+... .+.... ....+...| +++ ..+..++..||.+|+.|
T Consensus 326 ~~L~~~lgVP~V~T~HSLg-------r~K~~~-------ll~~g~~~~~~~~~~y~~~~Ri--~~Ee~~l~~Ad~VIasT 389 (1050)
T TIGR02468 326 ALLSGALNVPMVLTGHSLG-------RDKLEQ-------LLKQGRMSKEEINSTYKIMRRI--EAEELSLDASEIVITST 389 (1050)
T ss_pred HHHHHhhCCCEEEECccch-------hhhhhh-------hcccccccccccccccchHHHH--HHHHHHHHhcCEEEEeC
Confidence 44578999999999632 011000 000000 000000011 122 25788999999999999
Q ss_pred hhHHHHHHHHhCC-----------------------CCceEEEcCCCCCCCCccCCCCC---------------------
Q 016535 230 SWTQSHIEKLWGI-----------------------PDRIKRVYPPCDTSGLQVLPLER--------------------- 265 (388)
Q Consensus 230 ~~~~~~l~~~~~~-----------------------~~~~~vi~ngvd~~~~~~~~~~~--------------------- 265 (388)
+..++.+...|.. ..++.|||||+|+..|.+.....
T Consensus 390 ~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1050)
T TIGR02468 390 RQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSE 469 (1050)
T ss_pred HHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHH
Confidence 9999876666531 13889999999998887632110
Q ss_pred ------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCc-----cHHHHHHHHHHHHhcCC
Q 016535 266 ------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS-----DEERLQSLKDKSIELKV 334 (388)
Q Consensus 266 ------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~-----~~~~~~~l~~~~~~~~l 334 (388)
.++++.|+++||+.++||++.+|+|+..+.+... .+++. +++|++++.+ ..++..+++++++++++
T Consensus 470 l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~--~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL 546 (1050)
T TIGR02468 470 IMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRE--LANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDL 546 (1050)
T ss_pred HHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhcc--CCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCC
Confidence 1345689999999999999999999999965421 14665 4667664321 23456789999999999
Q ss_pred CCcEEEccCCCHHHHHHHHHhC----cEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 335 DGNVEFYKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 335 ~~~V~~~g~v~~~~l~~~~~~a----dv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.++|.|+|++++++++++|+.| |+||+||.+|+||++++||||||+|||+|+.+
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvG 604 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNG 604 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCC
Confidence 9999999999999999999988 69999999999999999999999999999864
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-29 Score=234.68 Aligned_cols=314 Identities=12% Similarity=0.066 Sum_probs=184.6
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.-.++.| |+|+++.+|++.|.++|+++++........ .. .+ ..+...........+....
T Consensus 1 mkil~i~~~l~~G-Gaeri~~~L~~~l~~~G~~~~i~~~~~~~~--~~---~~--------~~~~~~~~~~~~~~~~~~~ 66 (405)
T PRK10125 1 MNILQFNVRLAEG-GAAGVALDLHQRALQQGLASHFVYGYGKGG--KE---SV--------SHQNYPQVIKHTPRMTAMA 66 (405)
T ss_pred CeEEEEEeeecCC-chhHHHHHHHHHHHhcCCeEEEEEecCCCc--cc---cc--------ccCCcceEEEecccHHHHH
Confidence 7899998878777 999999999999999995544444333221 10 00 0010000000000000000
Q ss_pred CCCceehh-hhhhhHHHHHHHHH-hhcCCcEEEecCCccc--ccc-hh--------hhcCCeEEEEEeccccchhhhhh-
Q 016535 115 TYPRFTMI-GQSFGSVYLSWEAL-CKFTPLYYFDTSGYAF--TYP-LA--------RIFGCRVICYTHYPTISLDMISR- 180 (388)
Q Consensus 115 ~~~~~~~~-~~~~~~~~~~~~~l-~~~~~Div~~~~~~~~--~~~-~~--------~~~~~~~i~~~h~p~~~~~~~~~- 180 (388)
.....+.. ...+.......+.+ .+.+|||||.+.-... .++ +. +..++|+++++|........+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~ 146 (405)
T PRK10125 67 NIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFT 146 (405)
T ss_pred HHHHHHhcchhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCC
Confidence 00000000 01112222333334 5779999975533221 222 11 23468999999964422111110
Q ss_pred --hhcCCccccCCcccccc--chhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCC
Q 016535 181 --VREGSSMYNNNASIAQS--NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS 256 (388)
Q Consensus 181 --~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~ 256 (388)
.......|...+.+... ......++.+.+. ....+...+.++.++++|++.++.+.+.++ ..++.+||||+|++
T Consensus 147 ~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k-~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid~~ 224 (405)
T PRK10125 147 DGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGK-RQLFREMLALGCQFISPSQHVADAFNSLYG-PGRCRIINNGIDMA 224 (405)
T ss_pred cccccccccCCCCCCccCCCCCccchHHHHHHHH-HHHHHHHhhcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcCcc
Confidence 00111112222121100 0011111111111 112333345678999999999999887766 46899999999964
Q ss_pred CCc---cC-CCCCCCCCcEEEEEccc--CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHH
Q 016535 257 GLQ---VL-PLERSTEYPAIISVAQF--RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI 330 (388)
Q Consensus 257 ~~~---~~-~~~~~~~~~~il~vgrl--~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~ 330 (388)
.+. +. ......++..++++|+. .+.||++.+++|+..+ .++++|+++|.+++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l-------~~~~~L~ivG~g~~~~------------- 284 (405)
T PRK10125 225 TEAILAELPPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL-------GDKIELHTFGKFSPFT------------- 284 (405)
T ss_pred cccccccccccccCCCCCEEEEEEeccccCCccHHHHHHHHHhC-------CCCeEEEEEcCCCccc-------------
Confidence 221 11 11112355789999994 3689999999999986 2579999999763211
Q ss_pred hcCCCCcEEEccCC-CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 331 ELKVDGNVEFYKNL-LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 331 ~~~l~~~V~~~g~v-~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.+++.++|.. +.+++.++|++||+||+||.+|+||++++||||||+|||+||.+
T Consensus 285 ----~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~g 339 (405)
T PRK10125 285 ----AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSD 339 (405)
T ss_pred ----ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCC
Confidence 1468889976 56899999999999999999999999999999999999999974
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-29 Score=233.38 Aligned_cols=282 Identities=17% Similarity=0.143 Sum_probs=196.2
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
+|+++.+..+.| |+++.+.+++++|.++| |+|++++........ .. .. .. ....+... ...
T Consensus 1 ~il~~~~~~~~g-G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-~~---~~--~~------~~~~~~~~----~~~ 61 (360)
T cd04951 1 KILYVITGLGLG-GAEKQVVDLADQFVAKG--HQVAIISLTGESEVK-PP---ID--AT------IILNLNMS----KNP 61 (360)
T ss_pred CeEEEecCCCCC-CHHHHHHHHHHhcccCC--ceEEEEEEeCCCCcc-ch---hh--cc------ceEEeccc----ccc
Confidence 478888877665 99999999999999999 777777654321100 00 00 00 00011100 000
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
...+.......+.+.+.+||++|.+...+..+. +.+ ..+.+.+.+.|....
T Consensus 62 -------~~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------- 115 (360)
T cd04951 62 -------LSFLLALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------- 115 (360)
T ss_pred -------hhhHHHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc-------------------
Confidence 011122233345567789999987654332222 222 235677777775220
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCC--------
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------- 263 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~-------- 263 (388)
. . +...++.+.....++.++++|+...+.+.+.... ..++.++|||+|...+.+...
T Consensus 116 ----~---~-------~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~ 181 (360)
T cd04951 116 ----G---G-------RLRMLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNA 181 (360)
T ss_pred ----h---h-------HHHHHHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHH
Confidence 0 0 0111233444455788888999999998876543 468999999999776643221
Q ss_pred -CCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 264 -ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 264 -~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
...++++.++++|++.+.||++.+++|++++.++. |+++|+++|+|+..+ ++++.+++++..++|.|+|
T Consensus 182 ~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~~------~~~~~~~~~~~~~~v~~~g 251 (360)
T cd04951 182 LGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY----LDIKLLIAGDGPLRA------TLERLIKALGLSNRVKLLG 251 (360)
T ss_pred cCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC----CCeEEEEEcCCCcHH------HHHHHHHhcCCCCcEEEec
Confidence 11234588999999999999999999999998775 799999999876443 7888888888888999999
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 343 ~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++ +++.++|+.||++++||..|++|++++|||++|+|||++|.+
T Consensus 252 ~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~ 295 (360)
T cd04951 252 LR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAG 295 (360)
T ss_pred cc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCC
Confidence 87 789999999999999999999999999999999999999853
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=231.45 Aligned_cols=299 Identities=16% Similarity=0.172 Sum_probs=202.8
Q ss_pred eEEEeccc-cCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p~-~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+++..+ .+..||+++.+.+++++|.++| ++|++++........ . ...... ........
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~--~---~~~~~~------~~~~~~~~------ 61 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPE--E---EEVVVV------RPFRVPTF------ 61 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCc--c---cccccc------cccccccc------
Confidence 35555433 3445799999999999999999 788888765421100 0 000000 00000000
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
........ +.........+.+.+||+++....+..... +.+..++|.+...|.... +.....
T Consensus 62 ~~~~~~~~---~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~---------- 126 (374)
T cd03817 62 KYPDFRLP---LPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE--DYTHYV---------- 126 (374)
T ss_pred hhhhhhcc---ccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH--HHHHHH----------
Confidence 00000000 011112223466789999877655332222 334678899988886431 110000
Q ss_pred ccccccchhhhhhhHHHHHHH-HHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC-------
Q 016535 192 ASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------- 263 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------- 263 (388)
............ ++++...+.+|.+++.|+..++.+.+. +...++.++|||+|...+.+.+.
T Consensus 127 ---------~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd03817 127 ---------PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDERRKL 196 (374)
T ss_pred ---------hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc-CCCCceEEcCCccchhccCccchhHHHHhc
Confidence 000001111111 467888899999999999999988765 33556899999999877654332
Q ss_pred CCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 264 ~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
....++..++++|++.+.||++.++++++.+.++. ++++++++|.++. .+.+++.++++++.++|.++|.
T Consensus 197 ~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~----~~~~l~i~G~~~~------~~~~~~~~~~~~~~~~v~~~g~ 266 (374)
T cd03817 197 GIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEE----PDVKLVIVGDGPE------REELEELARELGLADRVIFTGF 266 (374)
T ss_pred CCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhC----CCeEEEEEeCCch------HHHHHHHHHHcCCCCcEEEecc
Confidence 11245688999999999999999999999998774 7999999997643 3478888888899899999999
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++++++.++|+.||++++||..|++|++++|||+||+|||+++.+
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~ 311 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAP 311 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCC
Confidence 999999999999999999999999999999999999999999864
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-28 Score=228.70 Aligned_cols=286 Identities=16% Similarity=0.052 Sum_probs=194.2
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+|+.|+....||.++++.+++++|.+.| +++++++........ .. ... .. . ..... .
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~---~~----~~~--~~-~-~~~~~--------~ 59 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSL---LY----GGE--QE-V-VRVIV--------L 59 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcc---cC----CCc--cc-c-eeeee--------c
Confidence 689999998867799999999999999999 667666654311100 00 000 00 0 00000 0
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc----hhh----hcCCeEEEEEeccccchhhhhhhhcCCcc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP----LAR----IFGCRVICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~----~~~----~~~~~~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
.. ........+.+.+.+||++|.+.......+ ... ..++|+++++|......
T Consensus 60 ~~--------~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------ 119 (366)
T cd03822 60 DN--------PLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHE------------ 119 (366)
T ss_pred CC--------chhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccc------------
Confidence 00 001122344567779999876653222211 111 27899999999741000
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECC-hhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC---
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNS-SWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--- 263 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S-~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~--- 263 (388)
......++.+...+.+|.++++| +..++.+...+ ..++.+++||++...+.....
T Consensus 120 -------------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 178 (366)
T cd03822 120 -------------------PRPGDRALLRLLLRRADAVIVMSSELLRALLLRAY--PEKIAVIPHGVPDPPAEPPESLKA 178 (366)
T ss_pred -------------------cchhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhcC--CCcEEEeCCCCcCcccCCchhhHh
Confidence 00111234566678899999996 33333333222 368999999999766654311
Q ss_pred -CCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 264 -ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 264 -~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
....++.+++|+|++.+.||++.+++|++.+.+++ ++++|+++|.+.+..... .....++++++++.++|.|+|
T Consensus 179 ~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~----~~~~l~i~G~~~~~~~~~-~~~~~~~i~~~~~~~~v~~~~ 253 (366)
T cd03822 179 LGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKH----PDVRLLVAGETHPDLERY-RGEAYALAERLGLADRVIFIN 253 (366)
T ss_pred hcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhC----CCeEEEEeccCccchhhh-hhhhHhHHHhcCCCCcEEEec
Confidence 12245689999999999999999999999998875 799999999875543111 111114478889999999998
Q ss_pred C-CCHHHHHHHHHhCcEEEEcCCCC--CCChHHHHHHHhCCceEeeCCC
Q 016535 343 N-LLYRDLVKLLGGAVVGIHSMIDE--HFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 343 ~-v~~~~l~~~~~~adv~v~ps~~E--~~~~~vlEAma~G~PVI~~~~~ 388 (388)
. ++.+++.++|+.||++++||..| ++|++++|||+||+|||+++.+
T Consensus 254 ~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~ 302 (366)
T cd03822 254 RYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVG 302 (366)
T ss_pred CcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCC
Confidence 7 99999999999999999999999 9999999999999999999863
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=233.63 Aligned_cols=297 Identities=17% Similarity=0.188 Sum_probs=195.2
Q ss_pred ceEEEeccccC-C-CCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccc
Q 016535 35 TSVAFFHPNTN-D-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (388)
Q Consensus 35 ~~I~~~~p~~~-~-gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 112 (388)
|||+++.+... . .||+++.+.+++++|.++ ++++|.++.... . . ..++.+..+.. +..
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~------~-----~------~~~~~~~~~~~--~~~ 60 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQR------F-----D------SEGLTVKGYRP--WSE 60 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCch------h-----c------CCCeEEEEecC--hhh
Confidence 68888866554 2 479999999999999886 346555432211 0 0 11122222211 100
Q ss_pred cCCCCceehhhhhhhHHHHHHHHH-hhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 113 ESTYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
+......+......+... ...++|++|.+..+..... ..+..++|.+.+.|....... +..
T Consensus 61 ------~~~~~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-----~~~----- 124 (388)
T TIGR02149 61 ------LKEANKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEPLRP-----WKE----- 124 (388)
T ss_pred ------ccchhhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeeccccccc-----ccc-----
Confidence 000111111111111112 2346999987764332222 234678999999995321000 000
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhC-C-CCceEEEcCCCCCCCCccCCCC---
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWG-I-PDRIKRVYPPCDTSGLQVLPLE--- 264 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~-~-~~~~~vi~ngvd~~~~~~~~~~--- 264 (388)
.... ..+....++++...+.+|.++++|+..++.+.+.++ . ..++.++|||+|.+.+.+....
T Consensus 125 -----------~~~~-~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~ 192 (388)
T TIGR02149 125 -----------EQLG-GGYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVL 192 (388)
T ss_pred -----------cccc-cchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHH
Confidence 0000 011234567888899999999999999999988763 2 4678999999998776542211
Q ss_pred ----CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC-CCcEE
Q 016535 265 ----RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV-DGNVE 339 (388)
Q Consensus 265 ----~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l-~~~V~ 339 (388)
...+..+++|+||+.++||++.+++|++.+. ++++++++|+++.. .++.+++++.+++++. .+++.
T Consensus 193 ~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~-------~~~~l~i~g~g~~~--~~~~~~~~~~~~~~~~~~~~v~ 263 (388)
T TIGR02149 193 DRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIP-------KDVQVVLCAGAPDT--PEVAEEVRQAVALLDRNRTGII 263 (388)
T ss_pred HHhCCCCCceEEEEEcccccccCHHHHHHHHHHHh-------hcCcEEEEeCCCCc--HHHHHHHHHHHHHhccccCceE
Confidence 1134568999999999999999999999883 37889998876542 2345677777777665 23577
Q ss_pred Ec-cCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 340 FY-KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 340 ~~-g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+. |.++.+++.++|+.||++|+||..|++|++++|||+||+|||++|.+
T Consensus 264 ~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~ 313 (388)
T TIGR02149 264 WINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG 313 (388)
T ss_pred EecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC
Confidence 65 68999999999999999999999999999999999999999999863
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=234.41 Aligned_cols=218 Identities=17% Similarity=0.083 Sum_probs=162.1
Q ss_pred HHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEE-Eec-cccchhhhhhhhcCCccccCCccccccchhhhhhh
Q 016535 130 YLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICY-THY-PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (388)
Q Consensus 130 ~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~-~h~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (388)
.....++++.+||+||.+...+..+. .+++.+.|++++ .|. +. .. ..+
T Consensus 270 ~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~---~~-------------------------~~r 321 (578)
T PRK15490 270 KHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPP---VV-------------------------RKR 321 (578)
T ss_pred HHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCC---cc-------------------------hhh
Confidence 33445688899999998766442232 556778898654 442 11 00 000
Q ss_pred HHHHHHHHHHH--HHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCC-----------CCCCCcE
Q 016535 206 VYYTFFSWMYG--LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-----------RSTEYPA 271 (388)
Q Consensus 206 ~~~~~~~~~~~--~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~-----------~~~~~~~ 271 (388)
....-+....+ .....+| ++++|..+++.+.+.++. ++++.+||||+|+..|.+.... ...+...
T Consensus 322 ~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~v 400 (578)
T PRK15490 322 LFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTT 400 (578)
T ss_pred HHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcE
Confidence 11111111111 2244556 788999999999877655 5789999999998766552210 0134468
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHH
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~ 351 (388)
++++||+.+.||+..+++++..+.++. |+++|+++|+|+.. ++++++++++++.++|.|+|+. +|+.+
T Consensus 401 Ig~VgRl~~~Kg~~~LI~A~a~llk~~----pdirLvIVGdG~~~------eeLk~la~elgL~d~V~FlG~~--~Dv~~ 468 (578)
T PRK15490 401 IGGVFRFVGDKNPFAWIDFAARYLQHH----PATRFVLVGDGDLR------AEAQKRAEQLGILERILFVGAS--RDVGY 468 (578)
T ss_pred EEEEEEEehhcCHHHHHHHHHHHHhHC----CCeEEEEEeCchhH------HHHHHHHHHcCCCCcEEECCCh--hhHHH
Confidence 899999999999999999999887774 89999999976543 4899999999999999999995 78999
Q ss_pred HHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 352 ~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+|+.+|++|+||.+|+||++++|||+||+|||+++.+
T Consensus 469 ~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG 505 (578)
T PRK15490 469 WLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAG 505 (578)
T ss_pred HHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCC
Confidence 9999999999999999999999999999999999864
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=227.11 Aligned_cols=283 Identities=18% Similarity=0.163 Sum_probs=196.8
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++.+.....||+++++.+++++|.+.| ++|++++..... .. .....++..+..+..... .
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~--~-- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKG--HEVTIISLDKGE--PP---------FYELDPKIKVIDLGDKRD--S-- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCC--CeEEEEecCCCC--CC---------ccccCCccceeecccccc--c--
Confidence 588888888745699999999999999999 788888766421 00 001112222222211100 0
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcC-CeEEEEEeccccchhhhhhhhcCCccccCCccc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~-~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (388)
.....+.......+.+.+.+||+++.+......+......+ +|.+.+.|.......
T Consensus 64 -----~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------ 120 (348)
T cd03820 64 -----KLLARFKKLRRLRKLLKNNKPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPDAYK------------------ 120 (348)
T ss_pred -----chhccccchHHHHHhhcccCCCEEEEcCchHHHHHHHHhhccccEEEecCCCccchh------------------
Confidence 00001111223334566789999987765411111122333 488888775331000
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEE
Q 016535 195 AQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274 (388)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~ 274 (388)
........++..++.+|.+++.|+..+..... ....++.++|||++...+... ...++..+++
T Consensus 121 ------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~---~~~~~~~i~~ 183 (348)
T cd03820 121 ------------KRLRRLLLRRLLYRRADAVVVLTEEDRALYYK--KFNKNVVVIPNPLPFPPEEPS---SDLKSKRILA 183 (348)
T ss_pred ------------hhhHHHHHHHHHHhcCCEEEEeCHHHHHHhhc--cCCCCeEEecCCcChhhcccc---CCCCCcEEEE
Confidence 00001114677788999999999999832222 225789999999997766543 1245588999
Q ss_pred EcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH
Q 016535 275 VAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG 354 (388)
Q Consensus 275 vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~ 354 (388)
+|++.+.||++.+++|++.+.++. ++++|+++|.+.+.+ .+.+.++++++.++|.+.|. .+++.++|+
T Consensus 184 ~g~~~~~K~~~~l~~~~~~l~~~~----~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~ 251 (348)
T cd03820 184 VGRLVPQKGFDLLIEAWAKIAKKH----PDWKLRIVGDGPERE------ALEALIKELGLEDRVILLGF--TKNIEEYYA 251 (348)
T ss_pred EEeeccccCHHHHHHHHHHHHhcC----CCeEEEEEeCCCCHH------HHHHHHHHcCCCCeEEEcCC--cchHHHHHH
Confidence 999999999999999999997764 899999999775443 67778888899899999998 589999999
Q ss_pred hCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 355 GAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 355 ~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.||++++||..|++|++++|||+||+|||+++.
T Consensus 252 ~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~ 284 (348)
T cd03820 252 KASIFVLTSRFEGFPMVLLEAMAFGLPVISFDC 284 (348)
T ss_pred hCCEEEeCccccccCHHHHHHHHcCCCEEEecC
Confidence 999999999999999999999999999999974
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-28 Score=227.68 Aligned_cols=298 Identities=16% Similarity=0.148 Sum_probs=204.0
Q ss_pred EEEeccccCC--CCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 37 VAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 37 I~~~~p~~~~--gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|+++.+.... .||+++.+.+++++|.+.| ++|++++........... ... .. .. .........
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g--~~v~v~~~~~~~~~~~~~--~~~---~~-~~-~~~~~~~~~------ 65 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRG--VEVTVLAPGPWGPKLLDL--LKG---RL-VG-VERLPVLLP------ 65 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCC--CceEEEecCCCCCCchhh--ccc---cc-cc-ccccccCcc------
Confidence 3455444443 4699999999999999999 778888766432111100 000 00 00 000000000
Q ss_pred CCCceehhhhhhhHHHHHHHHHh--hcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
.....................+. ..++|+++.+........ +.+..++|.+.+.|........
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~------------ 133 (377)
T cd03798 66 VVPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLP------------ 133 (377)
T ss_pred hhhccccchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccC------------
Confidence 00000001111111222233455 779998876644332222 2235567999999964421100
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC------
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ 263 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------ 263 (388)
........++...+.+|.+++.|+..++.+.+.+....++.+++||+|...+.+...
T Consensus 134 -----------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 196 (377)
T cd03798 134 -----------------RKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKL 196 (377)
T ss_pred -----------------chhhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHhc
Confidence 000223356777889999999999999999887433578999999999877765432
Q ss_pred CCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 264 ~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
....+...++++|++.+.||++.++++++.+.+++ ++++++++|.+.+.+ .+++.+++.+..++|.+.|+
T Consensus 197 ~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~----~~~~l~i~g~~~~~~------~~~~~~~~~~~~~~v~~~g~ 266 (377)
T cd03798 197 GLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKR----PDVHLVIVGDGPLRE------ALEALAAELGLEDRVTFLGA 266 (377)
T ss_pred cCCCCceEEEEeccCccccCHHHHHHHHHHHHhcC----CCeEEEEEcCCcchH------HHHHHHHhcCCcceEEEeCC
Confidence 12245689999999999999999999999997774 789999999765443 77888888888899999999
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++++++.++|+.||++++||..|++|.+++|||++|+|||+++.+
T Consensus 267 ~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~ 311 (377)
T cd03798 267 VPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG 311 (377)
T ss_pred CCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC
Confidence 999999999999999999999999999999999999999999853
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=230.71 Aligned_cols=290 Identities=17% Similarity=0.128 Sum_probs=180.1
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++.+.... ||+++++.+++++|.+.| |+|++++.... +...+...+ ...... +... .++. .
T Consensus 1 ki~~~~~~~~~-GGv~~~~~~l~~~l~~~g--~~v~~~~~~~~---~~~~~~~~~-~~~~~~-g~~~-~~~~------~- 64 (372)
T cd03792 1 KVLHVNSTPYG-GGVAEILHSLVPLMRDLG--VDTRWEVIKGD---PEFFNVTKK-FHNALQ-GADI-ELSE------E- 64 (372)
T ss_pred CeEEEeCCCCC-CcHHHHHHHHHHHHHHcC--CCceEEecCCC---hhHHHHHHH-hhHhhc-CCCC-CCCH------H-
Confidence 57888776644 599999999999999999 55555544321 111111000 000000 0000 0000 0
Q ss_pred CCceehhhhhhhHHHHHHH-HHhhcCCcEEEecCCcccccchhh-hcCCeEEEEEeccccchhhhhhhhcCCccccCCcc
Q 016535 116 YPRFTMIGQSFGSVYLSWE-ALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~-~l~~~~~Div~~~~~~~~~~~~~~-~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (388)
....+......... .+...+||+||.+...+...+.++ ..++|.+.++|.+....
T Consensus 65 -----~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~~~------------------ 121 (372)
T cd03792 65 -----EKEIYLEWNEENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDLSSP------------------ 121 (372)
T ss_pred -----HHHHHHHHHHHHhccccccCCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeecCCC------------------
Confidence 00000000000000 133568999987655433333333 34789888888633100
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC-----------
Q 016535 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----------- 262 (388)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~----------- 262 (388)
. ...++ +.+...+.+|.+++.|+ +......+ ..+. ++|||+|........
T Consensus 122 -------~---~~~~~----~~~~~~~~~d~~i~~~~---~~~~~~~~-~~~~-vipngvd~~~~~~~~~~~~~~~~~~~ 182 (372)
T cd03792 122 -------N---RRVWD----FLQPYIEDYDAAVFHLP---EYVPPQVP-PRKV-IIPPSIDPLSGKNRELSPADIEYILE 182 (372)
T ss_pred -------c---HHHHH----HHHHHHHhCCEEeecHH---HhcCCCCC-CceE-EeCCCCCCCccccCCCCHHHHHHHHH
Confidence 0 01111 23445567888888773 22222222 3344 999999964211100
Q ss_pred -CCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 016535 263 -LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (388)
Q Consensus 263 -~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~ 341 (388)
.....++.+++++||+.+.||++.+++|++.+.++. ++++|+++|+++..+ .+..+.+++..++.+..++|.|.
T Consensus 183 ~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~----~~~~l~i~G~g~~~~-~~~~~~~~~~~~~~~~~~~v~~~ 257 (372)
T cd03792 183 KYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERV----PDPQLVLVGSGATDD-PEGWIVYEEVLEYAEGDPDIHVL 257 (372)
T ss_pred HhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhC----CCCEEEEEeCCCCCC-chhHHHHHHHHHHhCCCCCeEEE
Confidence 011145688999999999999999999999997764 789999999986542 22223345555566777889999
Q ss_pred cCC--CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 342 KNL--LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 342 g~v--~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|.. +++++.++|+.||++++||..|+||++++|||+||+|||+++.+
T Consensus 258 ~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~ 306 (372)
T cd03792 258 TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVG 306 (372)
T ss_pred ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCC
Confidence 886 89999999999999999999999999999999999999999853
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-28 Score=226.42 Aligned_cols=288 Identities=22% Similarity=0.206 Sum_probs=200.6
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++.+....| |+++++.+++++|.+.| +++.+++.... ......... .+ +.+..+.....
T Consensus 1 ~i~~i~~~~~~g-G~~~~~~~l~~~l~~~~--~~v~~~~~~~~---~~~~~~~~~-~~------i~v~~~~~~~~----- 62 (365)
T cd03807 1 KVLHVITGLDVG-GAERMLVRLLKGLDRDR--FEHVVISLTDR---GELGEELEE-AG------VPVYCLGKRPG----- 62 (365)
T ss_pred CeEEEEeeccCc-cHHHHHHHHHHHhhhcc--ceEEEEecCcc---hhhhHHHHh-cC------CeEEEEecccc-----
Confidence 588888888775 99999999999999999 66666665431 111111111 12 22333322110
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhh-cCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~-~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
.. .........+.+.+.+||+++.......... ..+. .+.+.++..|.......
T Consensus 63 ~~-------~~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------- 119 (365)
T cd03807 63 RP-------DPGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG---------------- 119 (365)
T ss_pred cc-------cHHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc----------------
Confidence 00 1112233445567789999976644322222 2233 57788887775331000
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC--------
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------- 264 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~-------- 264 (388)
........++.+...+.++.++++|+..++.+.+......++.+++||+|...+.+....
T Consensus 120 ------------~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (365)
T cd03807 120 ------------KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREEL 187 (365)
T ss_pred ------------chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhc
Confidence 011122334566777889999999999999998753224688899999997665432211
Q ss_pred -CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHH-hcCCCCcEEEcc
Q 016535 265 -RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI-ELKVDGNVEFYK 342 (388)
Q Consensus 265 -~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~-~~~l~~~V~~~g 342 (388)
...+...++++|++.+.||++.+++|+..+.++. ++++++++|.++..+ .+++..+ ++++.++|.+.|
T Consensus 188 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~----~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~v~~~g 257 (365)
T cd03807 188 GLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKF----PNARLLLVGDGPDRA------NLELLALKELGLEDKVILLG 257 (365)
T ss_pred CCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhC----CCeEEEEecCCcchh------HHHHHHHHhcCCCceEEEcc
Confidence 1134578999999999999999999999998874 799999999876543 4455554 778889999999
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 343 ~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.. +|+.++|+.||++++||..|++|++++|||+||+|||+++.+
T Consensus 258 ~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~ 301 (365)
T cd03807 258 ER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVG 301 (365)
T ss_pred cc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCC
Confidence 76 789999999999999999999999999999999999999863
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-28 Score=225.80 Aligned_cols=297 Identities=21% Similarity=0.197 Sum_probs=209.3
Q ss_pred eEEEeccccCCC-CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p~~~~g-GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+++.+..... ||++..+.+++++|.+.| ++|++++......... . . ... ...... .
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~-----~---~--~~~-~~~~~~--------~ 59 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDE-----E---E--VGG-IVVVRP--------P 59 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCce-----e---e--ecC-cceecC--------C
Confidence 467776665433 799999999999999999 7888888764211110 0 0 000 000000 0
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
.....................+.+.++|+++.+........ ..+..++|.+.++|.........
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-------------- 125 (374)
T cd03801 60 PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGN-------------- 125 (374)
T ss_pred cccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhcccc--------------
Confidence 00001111111122223334566779999877765433332 34467899999999644211000
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCC-CceEEEcCCCCCCCCccC------CCCC
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVL------PLER 265 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~-~~~~vi~ngvd~~~~~~~------~~~~ 265 (388)
. ...........++...+.+|.+++.|+..++.+.+.++.. .++.++|||+|...+.+. ....
T Consensus 126 --------~--~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd03801 126 --------E--LGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGI 195 (374)
T ss_pred --------c--hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCC
Confidence 0 1122233444677888899999999999999999887653 689999999998776431 1222
Q ss_pred CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 266 ~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
..+...++++|++.+.||++.+++++..+.++. ++++|+++|.+ ...+.+++.+++++..++|.+.|+++
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~----~~~~l~i~G~~------~~~~~~~~~~~~~~~~~~v~~~g~~~ 265 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLEALAKLRKEY----PDVRLVIVGDG------PLREELEALAAELGLGDRVTFLGFVP 265 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHHHHHHHhhhc----CCeEEEEEeCc------HHHHHHHHHHHHhCCCcceEEEeccC
Confidence 245689999999999999999999999998775 78999999944 33457888888888989999999999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.+++.++|+.||++++|+..|++|++++|||++|+|||+++.
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~ 307 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV 307 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCC
Confidence 999999999999999999999999999999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-28 Score=238.11 Aligned_cols=332 Identities=15% Similarity=0.150 Sum_probs=199.9
Q ss_pred ccCccceEEEeccccC----------CCCChhhHHHHHHHHH--------hhcCCCc--eEEEEecCCCCCchhHHHHhh
Q 016535 30 RRNRTTSVAFFHPNTN----------DGGGGERVLWCAVKAI--------QEESPDL--DCIVYTGDHDAFPDSLLARAV 89 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~----------~gGG~~~~~~~l~~~L--------~~~g~~~--~v~v~~~~~~~~~~~~~~~~~ 89 (388)
|=...|+|+++.+... ..||...++.+++++| .++|+++ +|+++|...+.... .++.
T Consensus 251 ~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~---~~~~ 327 (784)
T TIGR02470 251 RIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG---TTCN 327 (784)
T ss_pred hCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc---cccc
Confidence 4456789998765441 2469999999999985 6889532 67888875321100 0000
Q ss_pred hhh-ceecCCCCeeEEecccc--------cccc-CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hh
Q 016535 90 DRF-GVELLHPPKVVHLYRRK--------WIEE-STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA 157 (388)
Q Consensus 90 ~~~-~i~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~ 157 (388)
+.. .+...++..+++++-++ |+++ ..|++ +..+.......+..-.+.+||+||.+.+...... ++
T Consensus 328 ~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~---l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla 404 (784)
T TIGR02470 328 QRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPY---LETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLA 404 (784)
T ss_pred cccccccCCCceEEEEecCCCCcccccccccCHHHHHHH---HHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHH
Confidence 000 01111233444443222 2221 11122 1111111111111111347999998765332222 55
Q ss_pred hhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHH-HHHHHHhccCCEEEECChhHHH--
Q 016535 158 RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQS-- 234 (388)
Q Consensus 158 ~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~ii~~S~~~~~-- 234 (388)
+..++|.+.+.|.... .+..... ..+. .....+....+ .-+..+...||.||+.|.....
T Consensus 405 ~~lgVP~v~t~HsL~~-------~K~~~~g---------~~~~-~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~ 467 (784)
T TIGR02470 405 RKLGVTQCTIAHALEK-------TKYPDSD---------IYWQ-EFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGT 467 (784)
T ss_pred HhcCCCEEEECCcchh-------hcccccc---------cccc-cchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhh
Confidence 6789999888885321 1100000 0000 00001111100 1155778899999999964322
Q ss_pred --HHHH-----------HhC-------CCCceEEEcCCCCCCCCccCCCC----------------------------CC
Q 016535 235 --HIEK-----------LWG-------IPDRIKRVYPPCDTSGLQVLPLE----------------------------RS 266 (388)
Q Consensus 235 --~l~~-----------~~~-------~~~~~~vi~ngvd~~~~~~~~~~----------------------------~~ 266 (388)
.+.. .++ ...++.++|||+|+..|.+.... ..
T Consensus 468 ~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d 547 (784)
T TIGR02470 468 KDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKD 547 (784)
T ss_pred hhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCC
Confidence 2211 111 13588999999998866543210 01
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC---C---ccHHHHHHHHHHHHhcCCCCcEEE
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN---K---SDEERLQSLKDKSIELKVDGNVEF 340 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~---~---~~~~~~~~l~~~~~~~~l~~~V~~ 340 (388)
.+++.|+++||+.+.||++.+++|+.++.+.. ++++|+++|++.. . +..++.+++.++++++++.++|.|
T Consensus 548 ~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~f 623 (784)
T TIGR02470 548 PNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRW 623 (784)
T ss_pred CCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEE
Confidence 34578999999999999999999999875432 5799999998743 1 122356788999999999999999
Q ss_pred ccCC-CHHHHHHHHH----hCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 341 YKNL-LYRDLVKLLG----GAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 341 ~g~v-~~~~l~~~~~----~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+|.+ +..+..++|. .+|+||+||++|+||++++|||+||+|||+|+.+
T Consensus 624 lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G 676 (784)
T TIGR02470 624 IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG 676 (784)
T ss_pred ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC
Confidence 9975 5566666665 3479999999999999999999999999999875
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=225.39 Aligned_cols=287 Identities=18% Similarity=0.084 Sum_probs=189.0
Q ss_pred eEEEeccccCC--CCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 36 ~I~~~~p~~~~--gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
||+|+.+.... +||+++++.+++++|.++| ++|++++.......... .. .......... .+...
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~----~~-------~~~~~~~~~~-~~~~~ 66 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQDK----EV-------IGVVVYGRPI-DEVLR 66 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCccc----cc-------ccceeecccc-ccccC
Confidence 46777655543 3699999999999999999 77888876642111100 00 0000000000 00000
Q ss_pred CCCCc--eehh-hhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCcc
Q 016535 114 STYPR--FTMI-GQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 114 ~~~~~--~~~~-~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
..... .... ...........+.+.+.+||+++.+........ .++..++|.+.++|........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~---------- 136 (359)
T cd03823 67 SALPRDLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPR---------- 136 (359)
T ss_pred CCchhhhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecch----------
Confidence 00000 0000 001111222334567789999887764322222 2345678999988853210000
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCC
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERST 267 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~ 267 (388)
........|.++++|+..++.+.+.+....++.+++||+|...+.+.......
T Consensus 137 ---------------------------~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~~~~~ 189 (359)
T cd03823 137 ---------------------------QGLFKKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRRAPPG 189 (359)
T ss_pred ---------------------------hhhhccCCCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccccCCCC
Confidence 01111223999999999999998765445689999999998776543321234
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
++.+++++|++.+.||++.++++++.+.+ ++++|+++|.++... ...... +..++|+++|+++.+
T Consensus 190 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~------~~~~l~i~G~~~~~~------~~~~~~---~~~~~v~~~g~~~~~ 254 (359)
T cd03823 190 GRLRFGFIGQLTPHKGVDLLLEAFKRLPR------GDIELVIVGNGLELE------EESYEL---EGDPRVEFLGAYPQE 254 (359)
T ss_pred CceEEEEEecCccccCHHHHHHHHHHHHh------cCcEEEEEcCchhhh------HHHHhh---cCCCeEEEeCCCCHH
Confidence 56889999999999999999999999865 389999999875443 222221 455799999999999
Q ss_pred HHHHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeCCC
Q 016535 348 DLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++.++|+.||++++||. .|++|++++|||+||+|||+++.+
T Consensus 255 ~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~ 296 (359)
T cd03823 255 EIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG 296 (359)
T ss_pred HHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC
Confidence 99999999999999997 799999999999999999999863
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=223.99 Aligned_cols=222 Identities=17% Similarity=0.203 Sum_probs=159.7
Q ss_pred HhhcCCcEEEecCCccccc--c---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHH
Q 016535 136 LCKFTPLYYFDTSGYAFTY--P---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF 210 (388)
Q Consensus 136 l~~~~~Div~~~~~~~~~~--~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (388)
.+..+||+||.+...+... . +++..+.|.++++|.... ..... . ........+.
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~---~----------------~~~~~~~~~~ 154 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGY--TLLAL---S----------------LGRSHPLVRL 154 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccH--HHHhc---c----------------cCCCCHHHHH
Confidence 3457999998754322221 1 334678899988885320 11000 0 0001123456
Q ss_pred HHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC---CCCCcEEEEEcccCCCCChHHH
Q 016535 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---STEYPAIISVAQFRPEKAHPLQ 287 (388)
Q Consensus 211 ~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~---~~~~~~il~vgrl~~~Kg~~~l 287 (388)
+.+++++.++++|.++++|+.+++.+.+.++.+ +.++||+.+ +.|.+..... ......++++||+.+.||++.+
T Consensus 155 ~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g~~--i~vi~n~~~-~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~~~l 231 (371)
T PLN02275 155 YRWYERHYGKMADGHLCVTKAMQHELDQNWGIR--ATVLYDQPP-EFFRPASLEIRLRPNRPALVVSSTSWTPDEDFGIL 231 (371)
T ss_pred HHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCC--eEEECCCCH-HHcCcCCchhcccCCCcEEEEEeCceeccCCHHHH
Confidence 667789999999999999999999998765543 789999853 4444322111 1234578899999999999999
Q ss_pred HHHHHHHHHHhc-------------CCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc-CCCHHHHHHHH
Q 016535 288 LEAFSVALRKLD-------------ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK-NLLYRDLVKLL 353 (388)
Q Consensus 288 l~a~~~l~~~~~-------------~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g-~v~~~~l~~~~ 353 (388)
++|+..+..+.. ...|+++|+++|+|+.++ ++++++++++++ ++.|.+ +++.+|++++|
T Consensus 232 i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~~------~l~~~~~~~~l~-~v~~~~~~~~~~~~~~~l 304 (371)
T PLN02275 232 LEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQKA------MYEEKISRLNLR-HVAFRTMWLEAEDYPLLL 304 (371)
T ss_pred HHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCHH------HHHHHHHHcCCC-ceEEEcCCCCHHHHHHHH
Confidence 999998853210 113789999999887654 899999999997 488765 69999999999
Q ss_pred HhCcEEEEcC---CCCCCChHHHHHHHhCCceEeeCCC
Q 016535 354 GGAVVGIHSM---IDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 354 ~~adv~v~ps---~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+.||++|.|+ ..|++|++++||||||+|||+++.+
T Consensus 305 ~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g 342 (371)
T PLN02275 305 GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 342 (371)
T ss_pred HhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCC
Confidence 9999999763 3489999999999999999999853
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=220.13 Aligned_cols=290 Identities=19% Similarity=0.130 Sum_probs=197.8
Q ss_pred eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCC
Q 016535 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (388)
Q Consensus 36 ~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 115 (388)
||+++.+. +||.++.+.+++++|.+.| ++|++++....... .....+ +.+..++.... .
T Consensus 1 kIl~i~~~---~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~------~~~~~~------~~~~~~~~~~~---~- 59 (359)
T cd03808 1 KILHIVTV---DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE------ELEALG------VKVIPIPLDRR---G- 59 (359)
T ss_pred CeeEEEec---chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc------ccccCC------ceEEecccccc---c-
Confidence 57888777 3699999999999999999 78888887642111 001111 12222211100 0
Q ss_pred CCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hh-h-hcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-R-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~-~-~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
... ...+.......+.+.+.+||+++.....+..+. +. + ....+++...|......
T Consensus 60 ~~~----~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------- 118 (359)
T cd03808 60 INP----FKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVF----------------- 118 (359)
T ss_pred cCh----HhHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhh-----------------
Confidence 000 111222233344567789999876654333222 22 3 23444555555322100
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC--CCceEEEcCCCCCCCCccCCCCCCCCCc
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPLERSTEYP 270 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~--~~~~~vi~ngvd~~~~~~~~~~~~~~~~ 270 (388)
.........+.++++...+.+|.++++|+..++.+.+.+.. ..++.+.++++|...+.........++.
T Consensus 119 ---------~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T cd03808 119 ---------TSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEPIPEDDP 189 (359)
T ss_pred ---------ccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccccCCCCc
Confidence 00001234455567888889999999999999999887654 3567778889987766543321124568
Q ss_pred EEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHH-HHHhcCCCCcEEEccCCCHHHH
Q 016535 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD-KSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 271 ~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~-~~~~~~l~~~V~~~g~v~~~~l 349 (388)
.++++|++.+.||++.++++++.+.+++ ++++|+++|.+...+ .... .+++.+..++|.+.|+. +++
T Consensus 190 ~i~~~G~~~~~k~~~~li~~~~~l~~~~----~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~v~~~g~~--~~~ 257 (359)
T cd03808 190 VFLFVARLLKDKGIDELLEAARILKAKG----PNVRLLLVGDGDEEN------PAAILEIEKLGLEGRVEFLGFR--DDV 257 (359)
T ss_pred EEEEEeccccccCHHHHHHHHHHHHhcC----CCeEEEEEcCCCcch------hhHHHHHHhcCCcceEEEeecc--ccH
Confidence 9999999999999999999999997764 799999999986554 2222 35666777899999994 899
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.++|+.||++++||..|++|++++|||+||+|||+++.+
T Consensus 258 ~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~ 296 (359)
T cd03808 258 PELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVP 296 (359)
T ss_pred HHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCC
Confidence 999999999999999999999999999999999999863
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=224.95 Aligned_cols=288 Identities=19% Similarity=0.135 Sum_probs=190.3
Q ss_pred eEEEecccc-CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHPNT-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p~~-~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+++.+.. +..||+++.+.+++++|.++| |+|++++......... ... ...+. ......
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~----~~~--~~~~~----~~~~~~------- 61 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG----PAR--VVPVP----SVPLPG------- 61 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC----CCC--ceeec----ccccCc-------
Confidence 466665333 333799999999999999999 8888888764210000 000 00000 000000
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
....... +.......+.+.+.+||+++.......... ..+..++|.+.++|.... ....
T Consensus 62 -~~~~~~~---~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~------------ 123 (364)
T cd03814 62 -YPEIRLA---LPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFP--EYLR------------ 123 (364)
T ss_pred -ccceEec---ccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChH--HHhh------------
Confidence 0000000 111112233456779999876544322221 334678999988885321 0000
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC------
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER------ 265 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~------ 265 (388)
.............+.+...+.+|.+++.|+...+.+.+.. ..++.+++||+|.+.+.+.....
T Consensus 124 ---------~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 192 (364)
T cd03814 124 ---------YYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARG--FRRVRLWPRGVDTELFHPRRRDEALRARL 192 (364)
T ss_pred ---------hcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccC--CCceeecCCCccccccCcccccHHHHHHh
Confidence 0000011122234567778889999999999999665543 35788999999987665432211
Q ss_pred -CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 266 -STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 266 -~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
..++..++++|++.+.||++.++++++.+.++ ++++++++|.+++.+ .++ +..++|.+.|++
T Consensus 193 ~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-----~~~~l~i~G~~~~~~------~~~------~~~~~v~~~g~~ 255 (364)
T cd03814 193 GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-----PPVRLVIVGDGPARA------RLE------ARYPNVHFLGFL 255 (364)
T ss_pred CCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-----CCceEEEEeCCchHH------HHh------ccCCcEEEEecc
Confidence 12357899999999999999999999999765 589999999875332 333 345789999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+.+++.++|++||++++||..|++|++++|||+||+|||+++.+
T Consensus 256 ~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~ 299 (364)
T cd03814 256 DGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAG 299 (364)
T ss_pred CHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCC
Confidence 99999999999999999999999999999999999999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=233.48 Aligned_cols=227 Identities=16% Similarity=0.121 Sum_probs=173.5
Q ss_pred CCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHH
Q 016535 140 TPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (388)
Q Consensus 140 ~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (388)
++|++|.++.....+. +++..++|.+++.|.-... +....+.. ..+.....+..+.+.+..+++
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~-e~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~ 239 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTR-ERKIELLQ------------ADWEMSYFRRLWIRFFESLGR 239 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHH-HHHHHHHh------------cccchHHHHHHHHHHHHHHHH
Confidence 6799987654222222 3457899999999963210 00000000 000112333444556677788
Q ss_pred HHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC-CCCCCcEEEEEcccCCCCChHHHHHHHHHHH
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-RSTEYPAIISVAQFRPEKAHPLQLEAFSVAL 295 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~-~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~ 295 (388)
.+++.+|.+++.|+..++...+....++++.+||||+|.+.+.+.... ...+.+.++++||+.+.||++.+++|++.++
T Consensus 240 ~~~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 319 (475)
T cd03813 240 LAYQAADRITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR 319 (475)
T ss_pred HHHHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCccccccCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 999999999999999998876653335789999999998877654321 2245689999999999999999999999998
Q ss_pred HHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHH
Q 016535 296 RKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEY 375 (388)
Q Consensus 296 ~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEA 375 (388)
++. |+++++++|++++ +.++.++++++++++++.++|+|+| .+++.++|+.+|++|+||..|++|++++||
T Consensus 320 ~~~----p~~~l~IvG~g~~--~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEA 390 (475)
T cd03813 320 KKI----PDAEGWVIGPTDE--DPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEA 390 (475)
T ss_pred HhC----CCeEEEEECCCCc--ChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHH
Confidence 875 8999999998752 4577889999999999999999999 378999999999999999999999999999
Q ss_pred HHhCCceEeeCCC
Q 016535 376 MAAGAIPIGKHFK 388 (388)
Q Consensus 376 ma~G~PVI~~~~~ 388 (388)
|+||+|||+||.+
T Consensus 391 ma~G~PVVatd~g 403 (475)
T cd03813 391 MAAGIPVVATDVG 403 (475)
T ss_pred HHcCCCEEECCCC
Confidence 9999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=220.69 Aligned_cols=309 Identities=12% Similarity=0.018 Sum_probs=183.1
Q ss_pred CccceEEEec-cccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhH-HH------Hh-hhhhceecCCCCee
Q 016535 32 NRTTSVAFFH-PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSL-LA------RA-VDRFGVELLHPPKV 102 (388)
Q Consensus 32 ~~~~~I~~~~-p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~-~~------~~-~~~~~i~~~~~~~~ 102 (388)
+++|+|+++. -+++.-+|.......++.+|.++|+ |+|+++.+......... .. .. .+.-.++-..+..+
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v 80 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERI 80 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeE
Confidence 4579999985 3334447999999999999999993 47888877542100000 00 00 00000000000111
Q ss_pred EEeccccccccCCCCc-eehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccch--hh-h--cCCeEEEEEeccccchh
Q 016535 103 VHLYRRKWIEESTYPR-FTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--AR-I--FGCRVICYTHYPTISLD 176 (388)
Q Consensus 103 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~--~~-~--~~~~~i~~~h~p~~~~~ 176 (388)
++++..++ ..++. +..-...+.......+.+.+.+||+||..+.+.... . +. . +..+++...|... ...
T Consensus 81 ~r~~s~~~---p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~-~~~g~~~~~k~~~vV~tyHT~y-~~Y 155 (462)
T PLN02846 81 SFLPKFSI---KFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTW-YHHGKRWKTKFRLVIGIVHTNY-LEY 155 (462)
T ss_pred EEeccccc---ccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhh-HHHHHHHHhcCCcEEEEECCCh-HHH
Confidence 22211111 00111 100001111112233456778999998776533322 2 22 1 1133565677522 000
Q ss_pred hhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCC
Q 016535 177 MISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS 256 (388)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~ 256 (388)
. . .|. .+.......+....+.++. ++|.+++.|+.+.+ +.+ ......+|+|.+
T Consensus 156 ~-~-------~~~----------~g~~~~~l~~~~~~~~~r~--~~d~vi~pS~~~~~-l~~------~~i~~v~GVd~~ 208 (462)
T PLN02846 156 V-K-------REK----------NGRVKAFLLKYINSWVVDI--YCHKVIRLSAATQD-YPR------SIICNVHGVNPK 208 (462)
T ss_pred H-H-------Hhc----------cchHHHHHHHHHHHHHHHH--hcCEEEccCHHHHH-Hhh------CEEecCceechh
Confidence 0 0 000 0011112222222222221 37899999986655 432 233446899988
Q ss_pred CCccCCCCC-----CCC--CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHH
Q 016535 257 GLQVLPLER-----STE--YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS 329 (388)
Q Consensus 257 ~~~~~~~~~-----~~~--~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~ 329 (388)
.|.+..... ..+ ...++|+||+.++||++.+|+|++.+.++. ++++|+|+|+|++++ +|++++
T Consensus 209 ~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~----~~~~l~ivGdGp~~~------~L~~~a 278 (462)
T PLN02846 209 FLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKEL----SGLEVDLYGSGEDSD------EVKAAA 278 (462)
T ss_pred hcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhC----CCeEEEEECCCccHH------HHHHHH
Confidence 776542211 122 235899999999999999999999998764 789999999887666 899999
Q ss_pred HhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 330 ~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++++..++ |.|..+. .++|+.+|+||+||..|+||++++||||||+|||++|.
T Consensus 279 ~~l~l~~~v-f~G~~~~---~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~ 332 (462)
T PLN02846 279 EKLELDVRV-YPGRDHA---DPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANH 332 (462)
T ss_pred HhcCCcEEE-ECCCCCH---HHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecC
Confidence 999886444 7887543 36999999999999999999999999999999999985
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-27 Score=219.99 Aligned_cols=313 Identities=17% Similarity=0.135 Sum_probs=201.9
Q ss_pred eEEEeccccC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 36 ~I~~~~p~~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
||+++.+... ..||+++.+.+++++|.++| ++|++++............. .......+..+..+.......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-- 72 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKG----YKREEVDGVRVHRVPLPPYKK-- 72 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCC--ceEEEEecCCCccccccccc----ceEEecCCeEEEEEecCCCCc--
Confidence 4677766543 33699999999999999999 78888876542111100000 001122233333332211100
Q ss_pred CCCceehhhhhhhHHHHHHHHH--hhcCCcEEEecCCcccc-cc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEAL--CKFTPLYYFDTSGYAFT-YP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l--~~~~~Div~~~~~~~~~-~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~ 188 (388)
...+..+...+.........+ ...+||+|+........ .+ +.+..++|.+.++|...........
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------- 143 (394)
T cd03794 73 -NGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALG-------- 143 (394)
T ss_pred -cchHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHcc--------
Confidence 001011111122222222223 36789998777522222 12 2234578999988853211100000
Q ss_pred cCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC-----
Q 016535 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----- 263 (388)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----- 263 (388)
.........+...++++..++.+|.+++.|+..++.+........++.++|||+|...+.+...
T Consensus 144 -----------~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 212 (394)
T cd03794 144 -----------LLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESLR 212 (394)
T ss_pred -----------CccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhhhh
Confidence 0000011124445568888999999999999999999733222578999999998765544321
Q ss_pred --CCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 016535 264 --ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (388)
Q Consensus 264 --~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~ 341 (388)
....++..++++|++.+.||++.+++|+..+.+. ++++++++|.++..+ .+.+.+...+. ++|.++
T Consensus 213 ~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-----~~~~l~i~G~~~~~~------~~~~~~~~~~~-~~v~~~ 280 (394)
T cd03794 213 KELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-----PDIRFLIVGDGPEKE------ELKELAKALGL-DNVTFL 280 (394)
T ss_pred hccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-----CCeEEEEeCCcccHH------HHHHHHHHcCC-CcEEEe
Confidence 1224568899999999999999999999999665 589999999765433 66666666655 589999
Q ss_pred cCCCHHHHHHHHHhCcEEEEcCCCCCC-----ChHHHHHHHhCCceEeeCCC
Q 016535 342 KNLLYRDLVKLLGGAVVGIHSMIDEHF-----GISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 342 g~v~~~~l~~~~~~adv~v~ps~~E~~-----~~~vlEAma~G~PVI~~~~~ 388 (388)
|.++++++.++|+.||++++||..|++ |.+++|||++|+|||+++.+
T Consensus 281 g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~ 332 (394)
T cd03794 281 GRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDG 332 (394)
T ss_pred CCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCC
Confidence 999999999999999999999998865 78899999999999999853
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=219.11 Aligned_cols=224 Identities=12% Similarity=-0.040 Sum_probs=153.8
Q ss_pred HHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHH
Q 016535 134 EALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW 213 (388)
Q Consensus 134 ~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (388)
+++.+.++|+||..+.....+......++|.++..|... .+........ .............+.+.+
T Consensus 98 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 98 ALLAAEPVDAIVVFSSAMAQYVTPHVRGVPRIVDFVDVD--SDKWLQYART-----------KRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHhhCCCCEEEEeccccceeccccccCCCeEeehhhHH--HHHHHHHHhc-----------cCcchhHHHHHHHHHHHH
Confidence 446667899987765422111111345788888777321 1111100000 000001111111234456
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCC---CCCCcEEEEEcccCCCCChHHHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER---STEYPAIISVAQFRPEKAHPLQLE 289 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~---~~~~~~il~vgrl~~~Kg~~~ll~ 289 (388)
+++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.|.+..... ..+...++|+|++.+.||++.+++
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~~~~~~~~~ilf~G~l~~~k~~~~l~~ 244 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPNPYPPGKRVLVFTGAMDYWPNIDAVVW 244 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccCCCCCCCcEEEEEEecCCccCHHHHHH
Confidence 78999999999999999999999876543 46889999999988776532211 123478999999999999999884
Q ss_pred ----HHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC-
Q 016535 290 ----AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI- 364 (388)
Q Consensus 290 ----a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~- 364 (388)
++..++++. |+++|+++|+++.. +++++ +..++|+|+|+++ |+..+|+.||++|+||.
T Consensus 245 ~~~~~~~~l~~~~----p~~~l~ivG~g~~~-------~~~~l----~~~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~ 307 (397)
T TIGR03087 245 FAERVFPAVRARR----PAAEFYIVGAKPSP-------AVRAL----AALPGVTVTGSVA--DVRPYLAHAAVAVAPLRI 307 (397)
T ss_pred HHHHHHHHHHHHC----CCcEEEEECCCChH-------HHHHh----ccCCCeEEeeecC--CHHHHHHhCCEEEecccc
Confidence 555565554 89999999987421 23332 3346899999995 78999999999999996
Q ss_pred CCCCChHHHHHHHhCCceEeeCC
Q 016535 365 DEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 365 ~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.||+|++++|||+||+|||+|+.
T Consensus 308 ~eG~~~~~lEAma~G~PVV~t~~ 330 (397)
T TIGR03087 308 ARGIQNKVLEAMAMAKPVVASPE 330 (397)
T ss_pred cCCcccHHHHHHHcCCCEEecCc
Confidence 69999999999999999999974
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-27 Score=229.54 Aligned_cols=229 Identities=16% Similarity=0.126 Sum_probs=155.9
Q ss_pred cCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHH-HHHH
Q 016535 139 FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF-SWMY 215 (388)
Q Consensus 139 ~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 215 (388)
.+||+||.+.+...... +++..++|.+.+.|... +.+....... |.. ....|.... ...+
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~-------k~K~~~~~~~---------~~~-~e~~y~~~~r~~aE 469 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALE-------KTKYPDSDIY---------WKK-FDDKYHFSCQFTAD 469 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccch-------hhhccccCCc---------ccc-cchhhhhhhchHHH
Confidence 46999998855332222 55688999999999532 1111100000 000 000111110 1136
Q ss_pred HHHhccCCEEEECChhHHHHHH-------HHh------------CC---CCceEEEcCCCCCCCCccCCCC---------
Q 016535 216 GLVGSCADLAMVNSSWTQSHIE-------KLW------------GI---PDRIKRVYPPCDTSGLQVLPLE--------- 264 (388)
Q Consensus 216 ~~~~~~a~~ii~~S~~~~~~l~-------~~~------------~~---~~~~~vi~ngvd~~~~~~~~~~--------- 264 (388)
..+...||.||+.|......+. ... +. ..++.++++|+|...|.+....
T Consensus 470 ~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n 549 (815)
T PLN00142 470 LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHP 549 (815)
T ss_pred HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcc
Confidence 7788899999998866653221 110 11 3478899999998766532100
Q ss_pred -------------------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC-C-----ccH
Q 016535 265 -------------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-K-----SDE 319 (388)
Q Consensus 265 -------------------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~-~-----~~~ 319 (388)
...++.+|+++||+.+.||++.+++|++++.+.. ++++|+++|++.+ . +..
T Consensus 550 ~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~----~~~~LVIVGgg~d~~~s~d~ee~ 625 (815)
T PLN00142 550 SIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLR----ELVNLVVVGGFIDPSKSKDREEI 625 (815)
T ss_pred cchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhC----CCcEEEEEECCccccccccHHHH
Confidence 0134568999999999999999999999886653 6899999998721 1 112
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCC----CHHHHHHHHHh-CcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 320 ERLQSLKDKSIELKVDGNVEFYKNL----LYRDLVKLLGG-AVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 320 ~~~~~l~~~~~~~~l~~~V~~~g~v----~~~~l~~~~~~-adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+..+++.++++++++.++|.|+|.. +.+++..+++. +|+||+||.+|+||++++||||||+|||+|+.+
T Consensus 626 ~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvG 699 (815)
T PLN00142 626 AEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQG 699 (815)
T ss_pred HHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCC
Confidence 2346788899999999999999854 34678777774 799999999999999999999999999999864
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=214.69 Aligned_cols=279 Identities=12% Similarity=-0.001 Sum_probs=182.8
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.+....| |+++.+.+++++|.++| |+|++++.... . +
T Consensus 1 MkIl~~~~~~~~g-G~~~~~~~l~~~l~~~G--~~v~v~~~~~~----~------------~------------------ 43 (365)
T cd03825 1 MKVLHLNTSDISG-GAARAAYRLHRALQAAG--VDSTMLVQEKK----A------------L------------------ 43 (365)
T ss_pred CeEEEEecCCCCC-cHHHHHHHHHHHHHhcC--CceeEEEeecc----h------------h------------------
Confidence 7899998776555 99999999999999999 77777775531 0 0
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhh-h-cCCeEEEEEeccccchhhhhhhhcCCc---c
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-I-FGCRVICYTHYPTISLDMISRVREGSS---M 187 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~-~-~~~~~i~~~h~p~~~~~~~~~~~~~~~---~ 187 (388)
.+.+...++|+||.+......+. ... . .++|.++++|................. .
T Consensus 44 ------------------~~~~~~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~ 105 (365)
T cd03825 44 ------------------ISKIEIINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTE 105 (365)
T ss_pred ------------------hhChhcccCCEEEEEccccCccCHHHHHHHHcCCCEEEEcccCcccccccCCcccccccccc
Confidence 00123458998875542222222 222 2 388999998853321100000000000 0
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCC--
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-- 264 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~-- 264 (388)
+......... .. . ......+.+........++.++++|++.++.+.+.++. ..++.++|||+|.+.+.+....
T Consensus 106 ~~~~~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~ 181 (365)
T cd03825 106 CGNCPQLGSY--PE-K-DLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREA 181 (365)
T ss_pred CCCCCCCCCC--Cc-c-cHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHH
Confidence 0000000000 00 0 01112222223333367889999999999999876533 4689999999998776432211
Q ss_pred -----CCCCCcEEEEEcccCC--CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 265 -----RSTEYPAIISVAQFRP--EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 265 -----~~~~~~~il~vgrl~~--~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
...+...+++.|+... .||++.+++|++.+.++. .++++++++|.++... .. +..++
T Consensus 182 ~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~---~~~~~~~i~G~~~~~~------~~-------~~~~~ 245 (365)
T cd03825 182 RKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERW---KDDIELVVFGASDPEI------PP-------DLPFP 245 (365)
T ss_pred HHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhcc---CCCeEEEEeCCCchhh------hc-------cCCCc
Confidence 1133456667777655 899999999999997751 2689999999864322 11 34578
Q ss_pred EEEccCCC-HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 338 VEFYKNLL-YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 338 V~~~g~v~-~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|.++|+++ .+++.++|+.||++++||..|+||++++|||+||+|||+++.+
T Consensus 246 v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~ 297 (365)
T cd03825 246 VHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVG 297 (365)
T ss_pred eEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCC
Confidence 99999999 8899999999999999999999999999999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-26 Score=217.76 Aligned_cols=153 Identities=15% Similarity=0.159 Sum_probs=130.5
Q ss_pred hccCCEEEECChhHHHHHHHHhCC----CCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGI----PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVA 294 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~----~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l 294 (388)
.+.+|.+++.|+..++.+.+.++. ..++.++|||++...+.+. ...++..++++||+.++||++.+++|++.+
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~---~~r~~~~il~vGrl~~~Kg~~~li~A~~~l 344 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE---QERKPFSIITASRLAKEKHIDWLVKAVVKA 344 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc---cccCCeEEEEEeccccccCHHHHHHHHHHH
Confidence 467899999999999988776542 4678999999875544321 123447899999999999999999999999
Q ss_pred HHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHH
Q 016535 295 LRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVE 374 (388)
Q Consensus 295 ~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlE 374 (388)
.++. |+++|.++|.|+.. +.++++++++++.++|.|.|+. ++.++|+.||++|+||..|+||++++|
T Consensus 345 ~~~~----p~~~l~i~G~G~~~------~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lE 411 (500)
T TIGR02918 345 KKSV----PELTFDIYGEGGEK------QKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLME 411 (500)
T ss_pred HhhC----CCeEEEEEECchhH------HHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHH
Confidence 8875 89999999976533 4899999999999999999975 678899999999999999999999999
Q ss_pred HHHhCCceEeeCC
Q 016535 375 YMAAGAIPIGKHF 387 (388)
Q Consensus 375 Ama~G~PVI~~~~ 387 (388)
|||||+|||++|.
T Consensus 412 Ama~G~PVI~~dv 424 (500)
T TIGR02918 412 AVGSGLGMIGFDV 424 (500)
T ss_pred HHHhCCCEEEecC
Confidence 9999999999985
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=209.73 Aligned_cols=164 Identities=18% Similarity=0.177 Sum_probs=138.2
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
.+..++.+|.++++|+..++.+.+.++. ..++.+++||++...+.+. ....+...++++|++.+.||++.+++|+..
T Consensus 177 ~~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--~~~~~~~~il~~Grl~~~Kg~~~li~a~~~ 254 (407)
T cd04946 177 RRYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK--PSKDDTLRIVSCSYLVPVKRVDLIIKALAA 254 (407)
T ss_pred HHHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC--CCCCCCEEEEEeeccccccCHHHHHHHHHH
Confidence 4555788999999999999999988775 4678899999987655432 122456889999999999999999999999
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChH
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGIS 371 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~ 371 (388)
++++.+. .++.++++|+|+.. +.+++++++++..++|.|+|+++++++.++|+. +|++++||..||+|++
T Consensus 255 l~~~~p~--~~l~~~iiG~g~~~------~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~ 326 (407)
T cd04946 255 LAKARPS--IKIKWTHIGGGPLE------DTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVS 326 (407)
T ss_pred HHHhCCC--ceEEEEEEeCchHH------HHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHH
Confidence 9887521 25777889976433 478888888888889999999999999999986 7899999999999999
Q ss_pred HHHHHHhCCceEeeCCC
Q 016535 372 VVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 372 vlEAma~G~PVI~~~~~ 388 (388)
++|||+||+|||+||.+
T Consensus 327 llEAma~G~PVIas~vg 343 (407)
T cd04946 327 IMEAMSFGIPVIATNVG 343 (407)
T ss_pred HHHHHHcCCCEEeCCCC
Confidence 99999999999999864
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=197.73 Aligned_cols=155 Identities=14% Similarity=0.072 Sum_probs=123.4
Q ss_pred HHHHH-hccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHH
Q 016535 214 MYGLV-GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAF 291 (388)
Q Consensus 214 ~~~~~-~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~ 291 (388)
++.+. .+.+|.++++|+.+++.+.+.+.. +.++.+||||+|.+.|.+.... ...+..++++|++.++||++.+++|+
T Consensus 86 ~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~-~~~~~vl~~~g~~~~~Kg~d~Li~A~ 164 (331)
T PHA01630 86 ALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE-KPHPCVLAILPHSWDRKGGDIVVKIF 164 (331)
T ss_pred HHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc-cCCCEEEEEeccccccCCHHHHHHHH
Confidence 35555 678999999999999999776322 4589999999998877653322 23446677888999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChH
Q 016535 292 SVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGIS 371 (388)
Q Consensus 292 ~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~ 371 (388)
+.+.++. ++++++++|++.... ++. ++. .+.|.++.+++.++|+.||++++||..|+||++
T Consensus 165 ~~l~~~~----~~~~llivG~~~~~~------~l~------~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~ 225 (331)
T PHA01630 165 HELQNEG----YDFYFLIKSSNMLDP------RLF------GLN---GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIP 225 (331)
T ss_pred HHHHhhC----CCEEEEEEeCcccch------hhc------ccc---ceeccCCHHHHHHHHHhCCEEEECCccccCChH
Confidence 9998774 799999999643211 111 222 135678999999999999999999999999999
Q ss_pred HHHHHHhCCceEeeCCC
Q 016535 372 VVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 372 vlEAma~G~PVI~~~~~ 388 (388)
++||||||+|||+||.+
T Consensus 226 ~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 226 VIEALALGLDVVVTEKG 242 (331)
T ss_pred HHHHHHcCCCEEEeCCC
Confidence 99999999999999864
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-25 Score=208.66 Aligned_cols=212 Identities=10% Similarity=0.018 Sum_probs=147.6
Q ss_pred HHHHhhcCCcEEEecCCcccccc-----hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHH
Q 016535 133 WEALCKFTPLYYFDTSGYAFTYP-----LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207 (388)
Q Consensus 133 ~~~l~~~~~Div~~~~~~~~~~~-----~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (388)
.+.+...+||++|.......... .++..+ |++..+|..... +... | ..+.+....
T Consensus 427 ~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~--------y----------~~g~L~~~l 486 (794)
T PLN02501 427 SQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKR--------E----------KNGALQAFF 486 (794)
T ss_pred HHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhH--------h----------cchhHHHHH
Confidence 34567789999976654222211 233455 788888864311 1100 0 012233333
Q ss_pred HHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCC-------CCCcEEEEEcccCC
Q 016535 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERS-------TEYPAIISVAQFRP 280 (388)
Q Consensus 208 ~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~-------~~~~~il~vgrl~~ 280 (388)
++..+++...+. +|.+++.|+.++ .+ + . ......||||++.|.+...... .....++|+||+.+
T Consensus 487 lk~l~~~v~r~h--cD~VIaPS~atq-~L----~-~-~vI~nVnGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVGRLa~ 557 (794)
T PLN02501 487 VKHINNWVTRAY--CHKVLRLSAATQ-DL----P-K-SVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVW 557 (794)
T ss_pred HHHHHHHHHHhh--CCEEEcCCHHHH-Hh----c-c-cceeecccccccccCCcchhHHHHhcCCccccCceEEEEcccc
Confidence 333323333322 899999997776 33 1 1 2222237999998876432110 11245899999999
Q ss_pred CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEE
Q 016535 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360 (388)
Q Consensus 281 ~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v 360 (388)
+||++.+++|++.+.++. ++++|+|+|+|+.++ +++++++++++. |.|+|.. ++..++|+.+|+||
T Consensus 558 EKGld~LLeAla~L~~~~----pnvrLvIVGDGP~re------eLe~la~eLgL~--V~FLG~~--dd~~~lyasaDVFV 623 (794)
T PLN02501 558 AKGYRELIDLLAKHKNEL----DGFNLDVFGNGEDAH------EVQRAAKRLDLN--LNFLKGR--DHADDSLHGYKVFI 623 (794)
T ss_pred cCCHHHHHHHHHHHHhhC----CCeEEEEEcCCccHH------HHHHHHHHcCCE--EEecCCC--CCHHHHHHhCCEEE
Confidence 999999999999997764 789999999887654 888889988874 9999997 55668999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 361 HSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 361 ~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+||..|+||++++||||||+|||++|.
T Consensus 624 lPS~sEgFGlVlLEAMA~GlPVVATd~ 650 (794)
T PLN02501 624 NPSISDVLCTATAEALAMGKFVVCADH 650 (794)
T ss_pred ECCCcccchHHHHHHHHcCCCEEEecC
Confidence 999999999999999999999999985
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-24 Score=201.26 Aligned_cols=156 Identities=21% Similarity=0.251 Sum_probs=134.7
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHh
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~ 298 (388)
.+.+|.+++.|+..++.+.+.++...++.++|||++...+.+... ....+..++++||+.++||++.+++|+..+.++.
T Consensus 155 ~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~~-~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~ 233 (372)
T cd04949 155 LDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQF-KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQV 233 (372)
T ss_pred hhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccch-hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhC
Confidence 467899999999999999988776556889999999776654321 1234578999999999999999999999998885
Q ss_pred cCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHh
Q 016535 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAA 378 (388)
Q Consensus 299 ~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~ 378 (388)
|+++|+++|.++... .+.+.+++++++++|.|.|+. +++.++|+.||++|+||..|+||++++|||++
T Consensus 234 ----~~~~l~i~G~g~~~~------~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~ 301 (372)
T cd04949 234 ----PDATLDIYGYGDEEE------KLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH 301 (372)
T ss_pred ----CCcEEEEEEeCchHH------HHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHHHhC
Confidence 899999999875433 677788888999999999965 78999999999999999999999999999999
Q ss_pred CCceEeeCC
Q 016535 379 GAIPIGKHF 387 (388)
Q Consensus 379 G~PVI~~~~ 387 (388)
|+|||++|.
T Consensus 302 G~PvI~~~~ 310 (372)
T cd04949 302 GLPVISYDV 310 (372)
T ss_pred CCCEEEecC
Confidence 999999975
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=184.56 Aligned_cols=152 Identities=17% Similarity=0.171 Sum_probs=119.7
Q ss_pred ccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC---------C-CCCCCcEEEEEcccCCCCChHHHHH
Q 016535 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL---------E-RSTEYPAIISVAQFRPEKAHPLQLE 289 (388)
Q Consensus 220 ~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~---------~-~~~~~~~il~vgrl~~~Kg~~~ll~ 289 (388)
.+.+.++++|+.+++.+++. +.+..+ ++++|+|++.|.+... . ...+...++++||+.++||++.+++
T Consensus 91 ~~~~~vIavS~~t~~~L~~~-G~~~~i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~ 168 (335)
T PHA01633 91 LQDVKFIPNSKFSAENLQEV-GLQVDL-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQ 168 (335)
T ss_pred hcCCEEEeCCHHHHHHHHHh-CCCCce-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHH
Confidence 34568999999999999875 433344 5789999887765321 0 0134578999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc---cCCCHHHHHHHHHhCcEEEEcCCCC
Q 016535 290 AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY---KNLLYRDLVKLLGGAVVGIHSMIDE 366 (388)
Q Consensus 290 a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~---g~v~~~~l~~~~~~adv~v~ps~~E 366 (388)
|++.+.++.+...++++++++|. . . .++++++++|+|. |.++.+++.++|+.||++|+||..|
T Consensus 169 A~~~L~~~~p~~~~~i~l~ivG~------~----~----~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~E 234 (335)
T PHA01633 169 VFNELNTKYPDIAKKIHFFVISH------K----Q----FTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTE 234 (335)
T ss_pred HHHHHHHhCCCccccEEEEEEcH------H----H----HHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccc
Confidence 99999887522112468888872 1 1 2345677899998 5668899999999999999999999
Q ss_pred CCChHHHHHHHhCCceEeeCC
Q 016535 367 HFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 367 ~~~~~vlEAma~G~PVI~~~~ 387 (388)
+||++++|||+||+|||++|.
T Consensus 235 gfGlvlLEAMA~G~PVVas~~ 255 (335)
T PHA01633 235 GFGMPVLESMAMGTPVIHQLM 255 (335)
T ss_pred cCCHHHHHHHHcCCCEEEccC
Confidence 999999999999999999975
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.7e-21 Score=182.60 Aligned_cols=269 Identities=16% Similarity=0.082 Sum_probs=167.8
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhh
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
.|-.+.+..++++|.++++++.+.+.+.+. +......+. + .+...+.+++.. .
T Consensus 60 ~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~--~~~~~~~~~---~----~~~~~~~~~P~d-------~----------- 112 (425)
T PRK05749 60 VGETRAAIPLIRALRKRYPDLPILVTTMTP--TGSERAQAL---F----GDDVEHRYLPYD-------L----------- 112 (425)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEeCCCc--cHHHHHHHh---c----CCCceEEEecCC-------c-----------
Confidence 367778899999999998777766555432 112222111 1 111222222210 0
Q ss_pred HHHHHHHHHhhcCCcEEEecCC--cccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhh
Q 016535 128 SVYLSWEALCKFTPLYYFDTSG--YAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (388)
Q Consensus 128 ~~~~~~~~l~~~~~Div~~~~~--~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (388)
.....+.++..+||+++...+ |+..+..++..++|++...|... .. + .
T Consensus 113 -~~~~~~~l~~~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~--~~------------------------s-~-- 162 (425)
T PRK05749 113 -PGAVRRFLRFWRPKLVIIMETELWPNLIAELKRRGIPLVLANARLS--ER------------------------S-F-- 162 (425)
T ss_pred -HHHHHHHHHhhCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCC--hh------------------------h-H--
Confidence 012223467789998865433 22222233467788876543210 00 0 0
Q ss_pred HHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCC-CCCCCCccCCCC-------CCCCCcEEEEEcc
Q 016535 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP-CDTSGLQVLPLE-------RSTEYPAIISVAQ 277 (388)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ng-vd~~~~~~~~~~-------~~~~~~~il~vgr 277 (388)
..++.+.++.+..++.+|.+++.|+..++.+.+....++ +.+++|+ .|.......... -..+..+++++|+
T Consensus 163 ~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 163 KRYQKFKRFYRLLFKNIDLVLAQSEEDAERFLALGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCCC-cEecccccccCCCChhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 111223456777788899999999999999987532233 7788885 332211110000 0023466788876
Q ss_pred cCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC------------C
Q 016535 278 FRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL------------L 345 (388)
Q Consensus 278 l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v------------~ 345 (388)
. .|+.+.+++|++.+.+++ |+++|+++|.++++ .+++++.++++|+. .+.+.|.. +
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~----~~~~liivG~g~~r-----~~~l~~~~~~~gl~-~~~~~~~~~~~~~~~v~l~~~ 309 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQF----PNLLLILVPRHPER-----FKEVEELLKKAGLS-YVRRSQGEPPSADTDVLLGDT 309 (425)
T ss_pred C--chHHHHHHHHHHHHHHhC----CCcEEEEcCCChhh-----HHHHHHHHHhCCCc-EEEccCCCCCCCCCcEEEEec
Confidence 4 688999999999987775 89999999986543 24788889988885 34443321 1
Q ss_pred HHHHHHHHHhCcEEEE-cCCCCCCChHHHHHHHhCCceEeeC
Q 016535 346 YRDLVKLLGGAVVGIH-SMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~-ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+|+.++|+.||+++. +|..|++|.+++|||+||+|||+++
T Consensus 310 ~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~ 351 (425)
T PRK05749 310 MGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGP 351 (425)
T ss_pred HHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECC
Confidence 3799999999998555 6778999999999999999999864
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.2e-21 Score=165.38 Aligned_cols=105 Identities=28% Similarity=0.299 Sum_probs=89.7
Q ss_pred EEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC-HHHHHHH
Q 016535 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL-YRDLVKL 352 (388)
Q Consensus 274 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~-~~~l~~~ 352 (388)
|+|++.+.||++.+++|+..+.++. ++++++++|.+.+.. ...+.+.+.+..++|.+.|.++ .+++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~----~~~~~~i~G~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 178 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG----PDLKLVIAGDGPERE------YLEELLAALLLLDRVIFLGGLDPEELLALL 178 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC----CCeEEEEEeCCCChH------HHHHHHHhcCCcccEEEeCCCCcHHHHHHH
Confidence 9999999999999999999998775 799999999875443 4444466677788999999984 5666666
Q ss_pred HHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 353 LGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 353 ~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++.||++++||..|++|.+++|||++|+|+|+++.+
T Consensus 179 ~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~ 214 (229)
T cd01635 179 LAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVG 214 (229)
T ss_pred hhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCC
Confidence 666999999999999999999999999999999863
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=176.59 Aligned_cols=261 Identities=17% Similarity=0.160 Sum_probs=163.0
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhh
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
||.++.+.+++++|.++| |+|++++..... . . +.... .++++..++.........+..+......+.
T Consensus 10 gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~--~--~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (350)
T cd03785 10 GGHIFPALALAEELRERG--AEVLFLGTKRGL--E--A-RLVPK------AGIPLHTIPVGGLRRKGSLKKLKAPFKLLK 76 (350)
T ss_pred hhhhhHHHHHHHHHHhCC--CEEEEEECCCcc--h--h-hcccc------cCCceEEEEecCcCCCChHHHHHHHHHHHH
Confidence 699999999999999999 888888765310 0 0 00000 122333332211100011111111111122
Q ss_pred HHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhh
Q 016535 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCK 204 (388)
Q Consensus 128 ~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (388)
......+.+++.+||+||.++..+ .++ .++..++|++++.|... . .
T Consensus 77 ~~~~~~~~i~~~~pDvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~------------------------~---~--- 125 (350)
T cd03785 77 GVLQARKILKKFKPDVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAV------------------------P---G--- 125 (350)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCC------------------------c---c---
Confidence 223334457778999998776533 222 34567888876544211 0 0
Q ss_pred hHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC----CCCCCCCcEEEEEcccCC
Q 016535 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQFRP 280 (388)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~----~~~~~~~~~il~vgrl~~ 280 (388)
...++..+.+|.+++.|+..++. .+ ..++.+++||+|.+.+...+ .....++..++++|+...
T Consensus 126 --------~~~~~~~~~~~~vi~~s~~~~~~----~~-~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~ 192 (350)
T cd03785 126 --------LANRLLARFADRVALSFPETAKY----FP-KDKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGGSQG 192 (350)
T ss_pred --------HHHHHHHHhhCEEEEcchhhhhc----CC-CCcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECCcHh
Confidence 11334455689999999988776 22 46888999999976554321 111234567778877667
Q ss_pred CCChHH-HHHHHHHHHHHhcCCCCCcEE-EEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcE
Q 016535 281 EKAHPL-QLEAFSVALRKLDADLPRPRL-QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 281 ~Kg~~~-ll~a~~~l~~~~~~~~~~~~l-~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv 358 (388)
.|+.+. +++|++.+.+ +++.+ .++|.+ + .+++++.++++ .++|.+.|++ +++.++|+.||+
T Consensus 193 ~~~~~~~l~~a~~~l~~------~~~~~~~i~G~g-~------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~ad~ 255 (350)
T cd03785 193 ARAINEAVPEALAELLR------KRLQVIHQTGKG-D------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAADL 255 (350)
T ss_pred HHHHHHHHHHHHHHhhc------cCeEEEEEcCCc-c------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhcCE
Confidence 777765 4588888852 35554 466754 2 23677777776 4689999998 899999999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+|.+|- +.+++|||++|+|+|+++
T Consensus 256 ~v~~sg----~~t~~Eam~~G~Pvv~~~ 279 (350)
T cd03785 256 VISRAG----ASTVAELAALGLPAILIP 279 (350)
T ss_pred EEECCC----HhHHHHHHHhCCCEEEee
Confidence 998662 688999999999999964
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=176.53 Aligned_cols=271 Identities=11% Similarity=0.070 Sum_probs=170.1
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.... ||.++...+++++|.++| |+|++++..... . ..... . .+..+..+.........
T Consensus 2 ~~i~i~~~g~---gG~~~~~~~la~~L~~~g--~ev~vv~~~~~~--~--~~~~~-~------~g~~~~~~~~~~~~~~~ 65 (357)
T PRK00726 2 KKILLAGGGT---GGHVFPALALAEELKKRG--WEVLYLGTARGM--E--ARLVP-K------AGIEFHFIPSGGLRRKG 65 (357)
T ss_pred cEEEEEcCcc---hHhhhHHHHHHHHHHhCC--CEEEEEECCCch--h--hhccc-c------CCCcEEEEeccCcCCCC
Confidence 6788875555 699999999999999999 788888764311 0 00101 0 12223333221110001
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
.+.++......++.+....+.+++.+||+||++........ ..+..+.|.+++.|...
T Consensus 66 ~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------- 125 (357)
T PRK00726 66 SLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV-------------------- 125 (357)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC--------------------
Confidence 01111112223344445556677889999998865332222 34467788886544211
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC----CCCC
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE----RSTE 268 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~----~~~~ 268 (388)
. . ...++.++.+|.+++.++... .+ ....++.+++||+|.+.+.+.... ...+
T Consensus 126 ----~---~-----------~~~r~~~~~~d~ii~~~~~~~---~~--~~~~~i~vi~n~v~~~~~~~~~~~~~~~~~~~ 182 (357)
T PRK00726 126 ----P---G-----------LANKLLARFAKKVATAFPGAF---PE--FFKPKAVVTGNPVREEILALAAPPARLAGREG 182 (357)
T ss_pred ----c---c-----------HHHHHHHHHhchheECchhhh---hc--cCCCCEEEECCCCChHhhcccchhhhccCCCC
Confidence 0 0 123445566899999887442 22 225789999999987654432111 1134
Q ss_pred CcEEEEEcccCCCCChHHHH-HHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 269 YPAIISVAQFRPEKAHPLQL-EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll-~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
...++++|+....|++..++ +|++++.+. + ..+.++|.+.. +++.+..+ +++. |.+.|++ +
T Consensus 183 ~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-----~-~~~~~~G~g~~-------~~~~~~~~-~~~~--v~~~g~~--~ 244 (357)
T PRK00726 183 KPTLLVVGGSQGARVLNEAVPEALALLPEA-----L-QVIHQTGKGDL-------EEVRAAYA-AGIN--AEVVPFI--D 244 (357)
T ss_pred CeEEEEECCcHhHHHHHHHHHHHHHHhhhC-----c-EEEEEcCCCcH-------HHHHHHhh-cCCc--EEEeehH--h
Confidence 57788999888888876655 888888432 3 56778897632 24555455 6664 9999998 7
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
++.++|+.||+++.+| .+.+++|||++|+|+|++.
T Consensus 245 ~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g~Pvv~~~ 279 (357)
T PRK00726 245 DMAAAYAAADLVICRA----GASTVAELAAAGLPAILVP 279 (357)
T ss_pred hHHHHHHhCCEEEECC----CHHHHHHHHHhCCCEEEec
Confidence 9999999999999876 2688999999999999964
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=179.52 Aligned_cols=220 Identities=17% Similarity=0.094 Sum_probs=149.2
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+|+.+.-+...+| +.+ ....++.+++|.|....+....+.-+ ..
T Consensus 125 ~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~r-----------------------~~----- 176 (456)
T TIGR02400 125 LQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWR-----------------------RE----- 176 (456)
T ss_pred CCCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCcH-----------------------HH-----
Confidence 355 57654444344445 333 34568889999988766655432110 01
Q ss_pred HHHHhccCCEEEECChhHHHHHHHH----h------------CCCCceEEEcCCCCCCCCccCCCCC------------C
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKL----W------------GIPDRIKRVYPPCDTSGLQVLPLER------------S 266 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~----~------------~~~~~~~vi~ngvd~~~~~~~~~~~------------~ 266 (388)
.-..+-.+|.|-..+..-++.+.+. . +...++.++|||+|++.|.+..... -
T Consensus 177 il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~ 256 (456)
T TIGR02400 177 LLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL 256 (456)
T ss_pred HHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc
Confidence 1223356788888888877776542 1 2245688999999998775432111 0
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc-----------CCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-----------KVD 335 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-----------~l~ 335 (388)
.++.+++++||+++.||++.+++|++.+.++++....++.|+++|.. .+.+.+..+++++.++++ +..
T Consensus 257 ~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p-~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~ 335 (456)
T TIGR02400 257 KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP-SRGDVPEYQQLRRQVEELVGRINGRFGTLDWT 335 (456)
T ss_pred CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC-CccCchHHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 34578999999999999999999999998876322224678888642 222333334555555443 111
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc----eEeeCC
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIGKHF 387 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P----VI~~~~ 387 (388)
+.+.+.|.++.+++.++|+.||++|+||..||||++++||||||+| +|+|+.
T Consensus 336 pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~ 391 (456)
T TIGR02400 336 PIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEF 391 (456)
T ss_pred cEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCC
Confidence 2344567899999999999999999999999999999999999999 888864
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.7e-21 Score=175.83 Aligned_cols=325 Identities=20% Similarity=0.230 Sum_probs=215.0
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhh---------cCCCceEEEEecCCCCCchhH-HHHhhhhhceecCCCCee
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQE---------ESPDLDCIVYTGDHDAFPDSL-LARAVDRFGVELLHPPKV 102 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~---------~g~~~~v~v~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~ 102 (388)
..+++.|.||+.+.| |+++-..+-+-.+.. .| ++|.+++.+.+.-.... ......... ....+.+
T Consensus 33 ~~~~~~~~~~~~~~g-g~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~al~~~~~~~~~~~~l~--~~~~i~v 107 (495)
T KOG0853|consen 33 PFEHVTFIHPDLGIG-GAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHEDALEMPLLLRCFAETLD--GTPPILV 107 (495)
T ss_pred cchhheeeccccccC-chHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhhhhcchHHHHHHHHHhc--CCCceEE
Confidence 566799999999888 999999888888888 99 88999998763211111 111121111 1111222
Q ss_pred EEeccccccccCC--CCceehhhhhhhHHHHHHHHHh--hcCCcEEEecCCcccccchhh-hc----CCeEEEEEecccc
Q 016535 103 VHLYRRKWIEEST--YPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYPLAR-IF----GCRVICYTHYPTI 173 (388)
Q Consensus 103 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~--~~~~Div~~~~~~~~~~~~~~-~~----~~~~i~~~h~p~~ 173 (388)
+ ..|+++.. +........+.+.++..+..+. ..+.|.++.... ..+.++.+ +. ...+.+|+|+|+.
T Consensus 108 v----~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d~~i~d~~-~~~~~l~~~~~~p~~~~~i~~~~h~~~~ 182 (495)
T KOG0853|consen 108 V----GDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVDPIIEDFV-SACVPLLKQLSGPDVIIKIYFYCHFPDS 182 (495)
T ss_pred E----EeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhceeecchH-HHHHHHHHHhcCCcccceeEEeccchHH
Confidence 2 33444433 2111112221111111111111 135676654433 23445444 44 3667889998762
Q ss_pred chhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC--CCceEEEcC
Q 016535 174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYP 251 (388)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~--~~~~~vi~n 251 (388)
++. + .....+.+++..+.+.+......++.++++|..++..++..+.. ..++.+.+.
T Consensus 183 ---lla----------------~--r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ 241 (495)
T KOG0853|consen 183 ---LLA----------------K--RLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYP 241 (495)
T ss_pred ---Hhc----------------c--ccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeec
Confidence 110 0 01234456677777888888899999999999999999876554 344888999
Q ss_pred CCCCCCCccCCC------CC--------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcC-CCCCcEEEEEe--CC-
Q 016535 252 PCDTSGLQVLPL------ER--------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA-DLPRPRLQFVG--SC- 313 (388)
Q Consensus 252 gvd~~~~~~~~~------~~--------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~-~~~~~~l~ivG--~~- 313 (388)
.+|.+.+.+... .. ......+.-+.++.|.||++.+++|+..+.+.... ..++.++.++| +.
T Consensus 242 ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d 321 (495)
T KOG0853|consen 242 EIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYD 321 (495)
T ss_pred cccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCcc
Confidence 998665542110 00 12356778889999999999999999999887632 23678999999 32
Q ss_pred -CCCccHHHHHHHHHHHHhcCC-CCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 314 -RNKSDEERLQSLKDKSIELKV-DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 314 -~~~~~~~~~~~l~~~~~~~~l-~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
...++.++.+++.++++++++ .+.|.|+...++.+...+++.+.+.+.....|+||++++|||+||+||+|+|+|
T Consensus 322 ~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~G 398 (495)
T KOG0853|consen 322 ERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNG 398 (495)
T ss_pred ccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCC
Confidence 344567899999999999999 477888888887777777777776666555599999999999999999999986
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.7e-21 Score=182.19 Aligned_cols=220 Identities=16% Similarity=0.102 Sum_probs=144.7
Q ss_pred CCcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHH
Q 016535 140 TPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (388)
Q Consensus 140 ~~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (388)
..|+|+.+..+...+| +.+ ....++++++|.|....+....+.. ... +.+
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~-----------------------~~~----ll~ 183 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPW-----------------------REE----LLR 183 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCC-----------------------hHH----HHH
Confidence 3467755544334444 333 3357899999988765554321110 001 111
Q ss_pred HHhccCCEEEECChhHHHHHHHH-----------------hCCCCceEEEcCCCCCCCCccCCCCC------------CC
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKL-----------------WGIPDRIKRVYPPCDTSGLQVLPLER------------ST 267 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~-----------------~~~~~~~~vi~ngvd~~~~~~~~~~~------------~~ 267 (388)
.+-.+|.+...+....+.+.+. .+...++.++|||+|++.|.+..... ..
T Consensus 184 -~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (460)
T cd03788 184 -GLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLG 262 (460)
T ss_pred -HHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcC
Confidence 1233777777775544444331 12235688999999987775432111 13
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC---ccHHHHHHHHHHHHhcCCC------CcE
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK---SDEERLQSLKDKSIELKVD------GNV 338 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~---~~~~~~~~l~~~~~~~~l~------~~V 338 (388)
++..++++||+++.||++.+++|++.+.++++....+++|+++|.+... +..++.+++++++++.+.. ..|
T Consensus 263 ~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v 342 (460)
T cd03788 263 GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPV 342 (460)
T ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeE
Confidence 5678999999999999999999999998876221124789988764321 1223455555555543211 235
Q ss_pred E-EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc----eEeeCC
Q 016535 339 E-FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIGKHF 387 (388)
Q Consensus 339 ~-~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P----VI~~~~ 387 (388)
. +.|.++.+++.++|+.||++|+||..|+||++++|||+||+| ||+|+.
T Consensus 343 ~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~ 396 (460)
T cd03788 343 RYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEF 396 (460)
T ss_pred EEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEecc
Confidence 4 458899999999999999999999999999999999999999 888864
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-20 Score=171.98 Aligned_cols=154 Identities=16% Similarity=0.056 Sum_probs=119.7
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC-------CCCCcEEEEEcccCCCCChH
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER-------STEYPAIISVAQFRPEKAHP 285 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~-------~~~~~~il~vgrl~~~Kg~~ 285 (388)
..++..++.+|.+++.|+..++.+.+.. .++.+++||+|.+.|.+..... ..+.+.++|+|++.+.++++
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~~~---~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ 221 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRRLN---PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE 221 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhhCC---CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH
Confidence 4588888999999999999999887653 5899999999987775432211 13568999999999988876
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCC
Q 016535 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (388)
Q Consensus 286 ~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~ 365 (388)
.+.++++ .. |+++|+++|.++... +..+. .-.+||+|+|.++.+++.++|+.+|++++|+..
T Consensus 222 ll~~la~----~~----p~~~~vliG~~~~~~------~~~~~----~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 222 LLEALAK----AR----PDWSFVLIGPVDVSI------DPSAL----LRLPNVHYLGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHHHHHH----HC----CCCEEEEECCCcCcc------ChhHh----ccCCCEEEeCCCCHHHHHHHHHhCCEEecCCcc
Confidence 6554433 22 799999999873222 11111 113699999999999999999999999999753
Q ss_pred -----CCCChHHHHHHHhCCceEeeCC
Q 016535 366 -----EHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 366 -----E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++|++++||||||+|||+++.
T Consensus 284 ~~~~~~~~P~Kl~EylA~G~PVVat~~ 310 (373)
T cd04950 284 NELTRATSPLKLFEYLAAGKPVVATPL 310 (373)
T ss_pred chhhhcCCcchHHHHhccCCCEEecCc
Confidence 4689999999999999999874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-20 Score=174.45 Aligned_cols=284 Identities=12% Similarity=0.024 Sum_probs=167.5
Q ss_pred ccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh-hhc--eecCCCCeeEEecccc
Q 016535 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFG--VELLHPPKVVHLYRRK 109 (388)
Q Consensus 33 ~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~-~~~--i~~~~~~~~~~~~~~~ 109 (388)
+.|||+++.-.. |||-...+..++++|.++| ++++++........+ ...+... .+. +...+. .+.+....
T Consensus 3 ~~~rili~t~~~--G~GH~~~a~al~~~l~~~g--~~~~~~~d~~~~~~~-~~~~~~~~~y~~~~~~~~~--~~~~~~~~ 75 (380)
T PRK13609 3 KNPKVLILTAHY--GNGHVQVAKTLEQTFRQKG--IKDVIVCDLFGESHP-VITEITKYLYLKSYTIGKE--LYRLFYYG 75 (380)
T ss_pred CCCeEEEEEcCC--CchHHHHHHHHHHHHHhcC--CCcEEEEEhHHhcch-HHHHHHHHHHHHHHHHhHH--HHHHHHhc
Confidence 567899997555 5578888899999999999 444444433211111 1111100 000 000000 00000000
Q ss_pred ccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
......................+.+.+.+||+||++++.. .++ +.+ ..++|++..++...
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~-~~~~~~~~~~~~ip~~~~~td~~-------------- 138 (380)
T PRK13609 76 --VEKIYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPII-AVPELKKQTGISIPTYNVLTDFC-------------- 138 (380)
T ss_pred --cCcccchHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHH-HHHHHHHhcCCCCCeEEEeCCCC--------------
Confidence 0000000000000011123344567888999999875533 333 222 33466553222100
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC---
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--- 263 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~--- 263 (388)
. ..++..+.+|.+++.|+..++.+.+....++++.+++++++..+..+.+.
T Consensus 139 ----------------------~----~~~~~~~~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~~~~~~~ 192 (380)
T PRK13609 139 ----------------------L----HKIWVHREVDRYFVATDHVKKVLVDIGVPPEQVVETGIPIRSSFELKINPDII 192 (380)
T ss_pred ----------------------C----CcccccCCCCEEEECCHHHHHHHHHcCCChhHEEEECcccChHHcCcCCHHHH
Confidence 0 02234567999999999999999875333467888877775432211110
Q ss_pred ----CC-CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcE
Q 016535 264 ----ER-STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV 338 (388)
Q Consensus 264 ----~~-~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V 338 (388)
.. .+....+++.|++...|+++.+++++... ++++++++|+. +.+..+++++.+++++ ++|
T Consensus 193 ~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~--------~~~~~viv~G~----~~~~~~~l~~~~~~~~--~~v 258 (380)
T PRK13609 193 YNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV--------PDLQVVVVCGK----NEALKQSLEDLQETNP--DAL 258 (380)
T ss_pred HHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC--------CCcEEEEEeCC----CHHHHHHHHHHHhcCC--CcE
Confidence 00 12234666779998899999999887532 68999887643 3444567888777665 689
Q ss_pred EEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 339 EFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 339 ~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+|+|++ +++.++|+.||+++. ++.|++++|||+||+|+|+++
T Consensus 259 ~~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~ 300 (380)
T PRK13609 259 KVFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGVPVILYK 300 (380)
T ss_pred EEEech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCCCEEECC
Confidence 999998 678999999999884 456999999999999999976
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=174.59 Aligned_cols=271 Identities=14% Similarity=0.128 Sum_probs=160.3
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||.|+.=.. ||..+...+++++|.++| |+|++++..... . .+..+..+ ..+..++...+....
T Consensus 1 ~~i~~~~g~~---~g~~~~~~~La~~L~~~g--~eV~vv~~~~~~--~---~~~~~~~g------~~~~~i~~~~~~~~~ 64 (348)
T TIGR01133 1 KKVVLAAGGT---GGHIFPALAVAEELIKRG--VEVLWLGTKRGL--E---KRLVPKAG------IEFYFIPVGGLRRKG 64 (348)
T ss_pred CeEEEEeCcc---HHHHhHHHHHHHHHHhCC--CEEEEEeCCCcc--h---hcccccCC------CceEEEeccCcCCCC
Confidence 4677664333 466666679999999999 888888764310 0 01111112 222232221111111
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
....+......+.......+.+++.+||+||.+........ .++..++|.+.+.+...
T Consensus 65 ~~~~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------- 124 (348)
T TIGR01133 65 SFRLIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV-------------------- 124 (348)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC--------------------
Confidence 11111111112223334445678889999988765332222 34566778764322100
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC----CCCCC
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERSTE 268 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----~~~~~ 268 (388)
. .+..++..+.+|.+++.|+..++.+ +..+++||+|...+.+... ...++
T Consensus 125 --------~----------~~~~~~~~~~~d~ii~~~~~~~~~~--------~~~~i~n~v~~~~~~~~~~~~~~~~~~~ 178 (348)
T TIGR01133 125 --------P----------GLTNKLLSRFAKKVLISFPGAKDHF--------EAVLVGNPVRQEIRSLPVPRERFGLREG 178 (348)
T ss_pred --------c----------cHHHHHHHHHhCeeEECchhHhhcC--------CceEEcCCcCHHHhcccchhhhcCCCCC
Confidence 0 0123455567899999999876664 2368999998654432111 11234
Q ss_pred CcEEEEEcccCCCCChHH-HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 269 YPAIISVAQFRPEKAHPL-QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~-ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
..+++++|+....|++.. +++|++.+.+. ++++++++++ .+. +++++.++++++.+.+.|. . +
T Consensus 179 ~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~------~~~~~~~~g~-----~~~-~~l~~~~~~~~l~~~v~~~---~-~ 242 (348)
T TIGR01133 179 KPTILVLGGSQGAKILNELVPKALAKLAEK------GIQIVHQTGK-----NDL-EKVKNVYQELGIEAIVTFI---D-E 242 (348)
T ss_pred CeEEEEECCchhHHHHHHHHHHHHHHHhhc------CcEEEEECCc-----chH-HHHHHHHhhCCceEEecCc---c-c
Confidence 578899998777888665 55888888543 4555444432 222 4788888888775445554 2 3
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
++.++|+.||++|.+| + |.+++|||++|+|+|+++.
T Consensus 243 ~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 243 NMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPY 278 (348)
T ss_pred CHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeC
Confidence 8899999999999864 2 7899999999999999753
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.85 E-value=4e-19 Score=168.43 Aligned_cols=243 Identities=14% Similarity=0.084 Sum_probs=144.4
Q ss_pred hcCCcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 138 KFTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 138 ~~~~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
..++|++|.+.+...... ..+ ...+|.|++.|.+.....+... ....|++...+- +-.-.....-.....+
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g---~~~~y~~l~~~~---~d~eA~~~~I~~r~~i 219 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAG---NVDFYNNLDYFD---VDKEAGKRGIYHRYCI 219 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccC---Ccccchhhhhcc---hhhhhhcccchHHHHH
Confidence 356889887765333222 222 4578899999965432221110 001111110000 0000000111112247
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC------------------------CCCCCCc
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------------------------ERSTEYP 270 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------------------------~~~~~~~ 270 (388)
|+.+...||.++++|+.+++++...++.+... |+|||+|...|..... .-..++.
T Consensus 220 E~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~t 298 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKT 298 (590)
T ss_pred HHHHHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCe
Confidence 89999999999999999999999998875444 9999999887754321 0012345
Q ss_pred EEEE-EcccCC-CCChHHHHHHHHHHHHHhcCCCCC---cEEEEEeCCCCCcc------HHHHHHHHHHH----------
Q 016535 271 AIIS-VAQFRP-EKAHPLQLEAFSVALRKLDADLPR---PRLQFVGSCRNKSD------EERLQSLKDKS---------- 329 (388)
Q Consensus 271 ~il~-vgrl~~-~Kg~~~ll~a~~~l~~~~~~~~~~---~~l~ivG~~~~~~~------~~~~~~l~~~~---------- 329 (388)
.++| +||++. .||+|.+|+|++++....+....+ +-|+++-+....-+ ....+++++.+
T Consensus 299 li~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~ 378 (590)
T cd03793 299 LYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKR 378 (590)
T ss_pred EEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhh
Confidence 5555 799998 999999999999997754432343 23333333211000 01111111111
Q ss_pred ---------------------------------------------------------HhcCC----CCc--EEEccC-CC
Q 016535 330 ---------------------------------------------------------IELKV----DGN--VEFYKN-LL 345 (388)
Q Consensus 330 ---------------------------------------------------------~~~~l----~~~--V~~~g~-v~ 345 (388)
+++++ .|+ |.|++. ++
T Consensus 379 ~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~ 458 (590)
T cd03793 379 LFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLS 458 (590)
T ss_pred hhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccC
Confidence 11112 122 333321 11
Q ss_pred ------HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 346 ------YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 346 ------~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
..+..++|+.||++|+||.+|+||++++|||+||+|||+|+.
T Consensus 459 ~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~ 506 (590)
T cd03793 459 STNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNL 506 (590)
T ss_pred CCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccC
Confidence 345788999999999999999999999999999999999986
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.9e-18 Score=160.37 Aligned_cols=319 Identities=15% Similarity=0.033 Sum_probs=197.5
Q ss_pred eccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh--hhceecC--------------CCCeeE
Q 016535 40 FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD--RFGVELL--------------HPPKVV 103 (388)
Q Consensus 40 ~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~--~~~i~~~--------------~~~~~~ 103 (388)
+.|....| |-+-++..+.++|.+.| ++|.++.+.++.-.++.....+. .++...- .+++.+
T Consensus 10 ~~p~vK~G-GLaDv~~alpk~L~~~g--~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 86 (487)
T COG0297 10 IFPFVKTG-GLADVVGALPKALAKRG--VDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKDGGVDLY 86 (487)
T ss_pred ecCccccC-cHHHHHHHhHHHHHhcC--CeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeecccCCCcEE
Confidence 35666666 99999999999999999 88888888763211211111011 0110000 001112
Q ss_pred EeccccccccCCCCceehhhhhhhHHHHH---HHHHhh----cCCcEEEecCCcccccc-hhh-----hcCCeEEEEEec
Q 016535 104 HLYRRKWIEESTYPRFTMIGQSFGSVYLS---WEALCK----FTPLYYFDTSGYAFTYP-LAR-----IFGCRVICYTHY 170 (388)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~----~~~Div~~~~~~~~~~~-~~~-----~~~~~~i~~~h~ 170 (388)
.+.......+..-......-...|..... ...+.. ..|||||++..+....+ ..+ ...+|.++++|.
T Consensus 87 lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHN 166 (487)
T COG0297 87 LIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHN 166 (487)
T ss_pred EecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEee
Confidence 22211111110000000001111111111 111211 46999998877655555 333 236889999995
Q ss_pred cccchhhhhhhhcCCccccCCccccccchhhhhhhHHH------HHHHHHHHHHhccCCEEEECChhHHHHHHH-HhCC-
Q 016535 171 PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYY------TFFSWMYGLVGSCADLAMVNSSWTQSHIEK-LWGI- 242 (388)
Q Consensus 171 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~-~~~~- 242 (388)
-.+.- ... .. . ..+.+.-...+. -....+.+..+..||.+.++|++-++++.. .++.
T Consensus 167 l~~qG-~~~-~~----------~---~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~g 231 (487)
T COG0297 167 LAYQG-LFR-LQ----------Y---LEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEG 231 (487)
T ss_pred ceeec-ccc-hh----------h---HHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhcccccccc
Confidence 33110 000 00 0 000000000000 011245788889999999999999998872 2321
Q ss_pred --------CCceEEEcCCCCCCCCccCCC------------C-C---------------CCCCcEEEEEcccCCCCChHH
Q 016535 243 --------PDRIKRVYPPCDTSGLQVLPL------------E-R---------------STEYPAIISVAQFRPEKAHPL 286 (388)
Q Consensus 243 --------~~~~~vi~ngvd~~~~~~~~~------------~-~---------------~~~~~~il~vgrl~~~Kg~~~ 286 (388)
..++.-|-||+|.....+... . . ..+.+.+.++||+..+||+|.
T Consensus 232 l~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl 311 (487)
T COG0297 232 LEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDL 311 (487)
T ss_pred chhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhH
Confidence 456788999998654433110 0 0 035689999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC
Q 016535 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366 (388)
Q Consensus 287 ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E 366 (388)
+++++..+.++ .+++++.|.| +..+.+.+.++++++.. ++.+.-..+..-...+|+.+|++++||.+|
T Consensus 312 ~~~~i~~~l~~------~~~~vilG~g----d~~le~~~~~la~~~~~--~~~~~i~~~~~la~~i~agaD~~lmPSrfE 379 (487)
T COG0297 312 LLEAIDELLEQ------GWQLVLLGTG----DPELEEALRALASRHPG--RVLVVIGYDEPLAHLIYAGADVILMPSRFE 379 (487)
T ss_pred HHHHHHHHHHh------CceEEEEecC----cHHHHHHHHHHHHhcCc--eEEEEeeecHHHHHHHHhcCCEEEeCCcCc
Confidence 99999999887 5999999998 66777899999988754 577766666777778999999999999999
Q ss_pred CCChHHHHHHHhCCceEeeCCC
Q 016535 367 HFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 367 ~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++|++-++||++|+++|+..++
T Consensus 380 PcGL~ql~amryGtvpIv~~tG 401 (487)
T COG0297 380 PCGLTQLYAMRYGTLPIVRETG 401 (487)
T ss_pred CCcHHHHHHHHcCCcceEcccC
Confidence 9999999999999999998764
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.5e-19 Score=147.40 Aligned_cols=112 Identities=27% Similarity=0.351 Sum_probs=98.7
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHH-hcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRK-LDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~-~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.++..++++||+.+.||++.+++|+..+.++ . +++.++++|.+ ++...+...++.+++.+++.|+|.++
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~----~~~~l~i~G~~------~~~~~~~~~~~~~~~~~~i~~~~~~~ 82 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKN----PNYKLVIVGDG------EYKKELKNLIEKLNLKENIIFLGYVP 82 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHH----TTEEEEEESHC------CHHHHHHHHHHHTTCGTTEEEEESHS
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcC----CCeEEEEEccc------cccccccccccccccccccccccccc
Confidence 4568999999999999999999999999874 4 79999999933 33457888899999989999999999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
.+++.++|+.||++|+||..|+||++++|||++|+|||+++.+
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~ 125 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIG 125 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESST
T ss_pred ccccccccccceeccccccccccccccccccccccceeecccc
Confidence 9999999999999999999999999999999999999999853
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=172.96 Aligned_cols=220 Identities=15% Similarity=0.079 Sum_probs=145.6
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+|..+.-+.+.+| +.+ ....++.+++|.|..+.+.+..+..+ + .+
T Consensus 145 ~~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r-------------------~----~i---- 197 (797)
T PLN03063 145 YEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSR-------------------S----EL---- 197 (797)
T ss_pred cCCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCH-------------------H----HH----
Confidence 455 57644443334445 433 45688999999999877765532211 0 11
Q ss_pred HHHHhccCCEEEECChhHHHHHHH----------------HhCCCCceEEEcCCCCCCCCccCCCC------------CC
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEK----------------LWGIPDRIKRVYPPCDTSGLQVLPLE------------RS 266 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~----------------~~~~~~~~~vi~ngvd~~~~~~~~~~------------~~ 266 (388)
-..+-.+|.|-..+....+++.+ ..+...++.++|||+|++.|.+.... .-
T Consensus 198 -l~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~ 276 (797)
T PLN03063 198 -LRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF 276 (797)
T ss_pred -HHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc
Confidence 11123455555555555555443 11223578899999998776532111 01
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcC--CCCc-------
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--VDGN------- 337 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~--l~~~------- 337 (388)
.++.+|+++||+++.||++.+++|++.+.++++....++.|+.++. +.+.+....+++++.++++. +..+
T Consensus 277 ~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~-psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~ 355 (797)
T PLN03063 277 AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAV-PTRNDVPEYQKLKSQVHELVGRINGRFGSVSSV 355 (797)
T ss_pred CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEec-CCCCchHHHHHHHHHHHHHHHHhhcccccCCCc
Confidence 3457899999999999999999999999888632122345665553 33334455556777776663 2211
Q ss_pred -EE-EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc----eEeeCC
Q 016535 338 -VE-FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIGKHF 387 (388)
Q Consensus 338 -V~-~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P----VI~~~~ 387 (388)
|. +.+.++.+++.++|+.||++|+||..||||++++||||||+| +|.|..
T Consensus 356 pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~ 411 (797)
T PLN03063 356 PIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEF 411 (797)
T ss_pred eeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCC
Confidence 33 346889999999999999999999999999999999999999 888764
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=156.91 Aligned_cols=156 Identities=12% Similarity=0.041 Sum_probs=112.1
Q ss_pred HHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC--------CCCCCCcEEEEEcccCCCCChHHHH
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--------ERSTEYPAIISVAQFRPEKAHPLQL 288 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~--------~~~~~~~~il~vgrl~~~Kg~~~ll 288 (388)
+..+.+|.+++.|+..++.+.+.+-.++++.++++|++.++..+... .-.++.+.++++|+....|++..++
T Consensus 146 w~~~~~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li 225 (382)
T PLN02605 146 WFHKGVTRCFCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETA 225 (382)
T ss_pred cccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHH
Confidence 33467999999999999999876433578999999998654432111 1114568899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcE-EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCC
Q 016535 289 EAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367 (388)
Q Consensus 289 ~a~~~l~~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~ 367 (388)
+++..+........++.+ ++++|. +.+..+++++. ...++|+|+|++ +++.++|+.||++|.++
T Consensus 226 ~~l~~~~~~~~~~~~~~~~~vi~G~-----~~~~~~~L~~~----~~~~~v~~~G~~--~~~~~l~~aaDv~V~~~---- 290 (382)
T PLN02605 226 RALGDSLYDKNLGKPIGQVVVICGR-----NKKLQSKLESR----DWKIPVKVRGFV--TNMEEWMGACDCIITKA---- 290 (382)
T ss_pred HHHHHhhccccccCCCceEEEEECC-----CHHHHHHHHhh----cccCCeEEEecc--ccHHHHHHhCCEEEECC----
Confidence 998865311000014565 566674 22333345443 223579999999 68999999999999864
Q ss_pred CChHHHHHHHhCCceEeeCC
Q 016535 368 FGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 368 ~~~~vlEAma~G~PVI~~~~ 387 (388)
.|++++|||+||+|+|+++.
T Consensus 291 g~~ti~EAma~g~PvI~~~~ 310 (382)
T PLN02605 291 GPGTIAEALIRGLPIILNGY 310 (382)
T ss_pred CcchHHHHHHcCCCEEEecC
Confidence 48899999999999999973
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-17 Score=154.86 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=107.0
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC-------CC-CCCCcEEEEEcccCCCCChHHHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------ER-STEYPAIISVAQFRPEKAHPLQLEA 290 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~-------~~-~~~~~~il~vgrl~~~Kg~~~ll~a 290 (388)
.+.+|.+++.|+.+++.+.+.+...+++.++.+|++..+..+.+. .- .++...+++.|+++..||++.++++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~ 224 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFIDVGIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITD 224 (391)
T ss_pred cCCCCEEEECCHHHHHHHHHcCCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHH
Confidence 467899999999999999875333567888888887443322110 00 1233456789999999999999998
Q ss_pred HHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCCh
Q 016535 291 FSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGI 370 (388)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~ 370 (388)
+. +.. ++++++++++. +.+..+++++.. +..++|.++|++ +++.++|+.||++|. ++.|+
T Consensus 225 ~~---~~~----~~~~~vvv~G~----~~~l~~~l~~~~---~~~~~v~~~G~~--~~~~~~~~~aDl~I~----k~gg~ 284 (391)
T PRK13608 225 IL---AKS----ANAQVVMICGK----SKELKRSLTAKF---KSNENVLILGYT--KHMNEWMASSQLMIT----KPGGI 284 (391)
T ss_pred HH---hcC----CCceEEEEcCC----CHHHHHHHHHHh---ccCCCeEEEecc--chHHHHHHhhhEEEe----CCchH
Confidence 53 221 57888777543 333334454433 334689999998 789999999999986 35689
Q ss_pred HHHHHHHhCCceEeeCC
Q 016535 371 SVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 371 ~vlEAma~G~PVI~~~~ 387 (388)
++.|||++|+|+|+++.
T Consensus 285 tl~EA~a~G~PvI~~~~ 301 (391)
T PRK13608 285 TISEGLARCIPMIFLNP 301 (391)
T ss_pred HHHHHHHhCCCEEECCC
Confidence 99999999999999863
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-17 Score=166.03 Aligned_cols=220 Identities=18% Similarity=0.152 Sum_probs=140.8
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+|+.+.-+.+.+| ..+ ....++.+++|.|....+....+..+. .
T Consensus 131 ~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~-----------------------~----- 182 (726)
T PRK14501 131 ARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWRE-----------------------E----- 182 (726)
T ss_pred cCCCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCChH-----------------------H-----
Confidence 455 56644443334445 333 346788999999987776655322110 0
Q ss_pred HHHHhccCCEEEECChhHHHHHHH----------------HhCCCCceEEEcCCCCCCCCccCCCC------------CC
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEK----------------LWGIPDRIKRVYPPCDTSGLQVLPLE------------RS 266 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~----------------~~~~~~~~~vi~ngvd~~~~~~~~~~------------~~ 266 (388)
.-..+-.+|.|-..+....+.+.+ ..+...++.++|||+|++.|.+.... ..
T Consensus 183 ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~ 262 (726)
T PRK14501 183 ILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL 262 (726)
T ss_pred HHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc
Confidence 011123345555555544444322 11223468899999998877543211 01
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCcc----HHHHHHHHHHHHhcC-------CC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD----EERLQSLKDKSIELK-------VD 335 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~----~~~~~~l~~~~~~~~-------l~ 335 (388)
.++..++++||+++.||++.+++|++.+.++++....+++|+++|.+. +++ .++.+++.+++++.+ ..
T Consensus 263 ~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~s-r~~~~~~~~l~~~~~~~v~~in~~~~~~~~~ 341 (726)
T PRK14501 263 RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPS-RTGVPQYQEMKREIDELVGRINGEFGTVDWT 341 (726)
T ss_pred CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC-CcchHHHHHHHHHHHHHHHHHHhhcCCCCcc
Confidence 345789999999999999999999999988763222247899997532 112 223334444433221 11
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHh-----CCceEeeCC
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAA-----GAIPIGKHF 387 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~-----G~PVI~~~~ 387 (388)
+.+.+.|.++++|+.++|+.||++++||..||||++++|||+| |.||++...
T Consensus 342 pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~ 398 (726)
T PRK14501 342 PIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMA 398 (726)
T ss_pred eEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEeccc
Confidence 2355779999999999999999999999999999999999999 456666543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-16 Score=146.54 Aligned_cols=144 Identities=14% Similarity=0.078 Sum_probs=114.7
Q ss_pred CceEEEcCCCCCCCCccCCCCC------------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 244 DRIKRVYPPCDTSGLQVLPLER------------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 244 ~~~~vi~ngvd~~~~~~~~~~~------------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
.++.++|.|+|++.|....... -.++.+|+.++|+++.||++..++|++++.++++....++.|+++|
T Consensus 248 v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~ 327 (487)
T TIGR02398 248 VKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTAC 327 (487)
T ss_pred EEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEe
Confidence 3478899999988775431111 0356899999999999999999999999999885544568999999
Q ss_pred CCCCCcc---HHHHHHHHHHHHhc-------CCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC-
Q 016535 312 SCRNKSD---EERLQSLKDKSIEL-------KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA- 380 (388)
Q Consensus 312 ~~~~~~~---~~~~~~l~~~~~~~-------~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~- 380 (388)
.+...+. .++.+++++.+.+. +..+-+.+.+.+|.+++..+|+.||+++.||..|||+++..|+++|+.
T Consensus 328 ~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~ 407 (487)
T TIGR02398 328 VPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGL 407 (487)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcC
Confidence 7643211 23556666666654 556668889999999999999999999999999999999999999988
Q ss_pred ---ceEeeCC
Q 016535 381 ---IPIGKHF 387 (388)
Q Consensus 381 ---PVI~~~~ 387 (388)
|+|.|..
T Consensus 408 ~~GvLILSef 417 (487)
T TIGR02398 408 LDGVLVLSEF 417 (487)
T ss_pred CCCCEEEecc
Confidence 8888764
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-14 Score=126.83 Aligned_cols=314 Identities=18% Similarity=0.239 Sum_probs=194.8
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccc
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (388)
+.|+..|+++.-+. |-..|+.+ -|..|++.|.+++.+=|..+. +.+++. + ++++++..+...+.
T Consensus 10 ~~k~ra~vvVLGDv---GRSPRMqY-HA~Sla~~gf~VdliGy~~s~--p~e~l~----~------hprI~ih~m~~l~~ 73 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDV---GRSPRMQY-HALSLAKLGFQVDLIGYVESI--PLEELL----N------HPRIRIHGMPNLPF 73 (444)
T ss_pred cccceEEEEEeccc---CCChHHHH-HHHHHHHcCCeEEEEEecCCC--ChHHHh----c------CCceEEEeCCCCcc
Confidence 34444455665555 56666665 578899999555555555443 333332 1 33334444433222
Q ss_pred cccCCCCceehhhhhhhHHHHHHHHHhhcCCcEE-EecCCcccccchh----hhcCCeEEEEEeccccchhhhhhhhcCC
Q 016535 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYY-FDTSGYAFTYPLA----RIFGCRVICYTHYPTISLDMISRVREGS 185 (388)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div-~~~~~~~~~~~~~----~~~~~~~i~~~h~p~~~~~~~~~~~~~~ 185 (388)
+.....-.+-.+...+....+.|.++....+|++ +.+.....++.+. .+++++.++.+|.-.++..+ ...
T Consensus 74 ~~~~p~~~~l~lKvf~Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l--~~~--- 148 (444)
T KOG2941|consen 74 LQGGPRVLFLPLKVFWQFLSLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQL--KLK--- 148 (444)
T ss_pred cCCCchhhhhHHHHHHHHHHHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHH--Hhh---
Confidence 2211100111122222333444555556678976 4443322222222 36799999999975433111 111
Q ss_pred ccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcC--CC-----CC---
Q 016535 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYP--PC-----DT--- 255 (388)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~n--gv-----d~--- 255 (388)
......+.+..+|.|+...+.||.-+|+++.+++++.+.+++. +..++|. +- |.
T Consensus 149 ---------------~g~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-ra~v~YDrPps~~~~l~~~H~ 212 (444)
T KOG2941|consen 149 ---------------LGFQHPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGIN-RAKVLYDRPPSKPTPLDEQHE 212 (444)
T ss_pred ---------------cCCCCchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCCc-eeEEEecCCCCCCCchhHHHH
Confidence 1112244677788899999999999999999999999999852 3334432 11 10
Q ss_pred ---------CCCccCCCCC--------------------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHh---cCCCC
Q 016535 256 ---------SGLQVLPLER--------------------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKL---DADLP 303 (388)
Q Consensus 256 ---------~~~~~~~~~~--------------------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~---~~~~~ 303 (388)
..|..+..+. .+.+..++....+.++.++..+++|+....++. ....|
T Consensus 213 lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP 292 (444)
T KOG2941|consen 213 LFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLP 292 (444)
T ss_pred HHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCC
Confidence 0111100000 033456677777889999999999998542221 11258
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCCHHHHHHHHHhCc--EEEEcCC-CCCCChHHHHHHHhC
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAV--VGIHSMI-DEHFGISVVEYMAAG 379 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~-~g~v~~~~l~~~~~~ad--v~v~ps~-~E~~~~~vlEAma~G 379 (388)
++-++|.|.|+.+| .+.+.++++.+. +|.+ ..+.+.+|.+.+++.|| +++++|. .=..|+.++....||
T Consensus 293 ~llciITGKGPlkE------~Y~~~I~~~~~~-~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcg 365 (444)
T KOG2941|consen 293 SLLCIITGKGPLKE------KYSQEIHEKNLQ-HVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCG 365 (444)
T ss_pred cEEEEEcCCCchhH------HHHHHHHHhccc-ceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCC
Confidence 89999999998887 889999999886 6766 58889999999999999 5556654 347999999999999
Q ss_pred CceEeeCCC
Q 016535 380 AIPIGKHFK 388 (388)
Q Consensus 380 ~PVI~~~~~ 388 (388)
+||+|-|.+
T Consensus 366 lPvcA~~fk 374 (444)
T KOG2941|consen 366 LPVCAVNFK 374 (444)
T ss_pred Cceeeecch
Confidence 999998864
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.2e-15 Score=138.02 Aligned_cols=152 Identities=16% Similarity=0.075 Sum_probs=112.4
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccC--C-------CCCCCCCcEEEEEcccCC---CCChH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVL--P-------LERSTEYPAIISVAQFRP---EKAHP 285 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~--~-------~~~~~~~~~il~vgrl~~---~Kg~~ 285 (388)
.+.+|.+++.|+..++.+.+.+-.+.++.+++||+ |...+... . ....+++..+++.|+... .||++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~ 218 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLE 218 (363)
T ss_pred HHHhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHH
Confidence 35679999999999999977643357798999995 43211110 0 001133456778898775 79999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC-CCcEEEccCCCHHHHHHHHHhCcEEEEcCC
Q 016535 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV-DGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 286 ~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l-~~~V~~~g~v~~~~l~~~~~~adv~v~ps~ 364 (388)
.+++|++.+.++ ++.+++.|.++. .+++++.+++++. .++|.|.|..+.+++..+|+.||++|.+|.
T Consensus 219 ~l~~al~~l~~~------~~~vi~~~~~~~------~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg 286 (363)
T cd03786 219 EILEALAELAEE------DVPVVFPNHPRT------RPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG 286 (363)
T ss_pred HHHHHHHHHHhc------CCEEEEECCCCh------HHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc
Confidence 999999988432 467766664332 2377777777776 678999998888999999999999999984
Q ss_pred CCCCChHHHHHHHhCCceEeeCC
Q 016535 365 DEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 365 ~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
| +..|||++|+|+|+++.
T Consensus 287 ----g-i~~Ea~~~g~PvI~~~~ 304 (363)
T cd03786 287 ----G-IQEEASFLGVPVLNLRD 304 (363)
T ss_pred ----c-HHhhhhhcCCCEEeeCC
Confidence 3 47899999999999863
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-14 Score=133.67 Aligned_cols=149 Identities=13% Similarity=0.058 Sum_probs=106.2
Q ss_pred cCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCcc--C---CCCC--CCCCcEEEEEc-ccC-CCCChHHHHHH
Q 016535 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQV--L---PLER--STEYPAIISVA-QFR-PEKAHPLQLEA 290 (388)
Q Consensus 221 ~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~--~---~~~~--~~~~~~il~vg-rl~-~~Kg~~~ll~a 290 (388)
.+|.+++.|+..++.+.+.+-.+.++.+++||+ |...... . .... ..++.++++.+ |.. ..||++.+++|
T Consensus 141 ~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a 220 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKA 220 (365)
T ss_pred HHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHH
Confidence 479999999999999987643356899999996 4211110 0 0000 01234455544 443 46999999999
Q ss_pred HHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCCh
Q 016535 291 FSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGI 370 (388)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~ 370 (388)
+..+.++. |+++++++|.++ .+..+.+ .+.++..++|.|+|.++..++..+++.||+++.+| |.
T Consensus 221 ~~~l~~~~----~~~~~vi~~~~~----~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~ 284 (365)
T TIGR00236 221 IREIVEEF----EDVQIVYPVHLN----PVVREPL---HKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GG 284 (365)
T ss_pred HHHHHHHC----CCCEEEEECCCC----hHHHHHH---HHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hh
Confidence 99987764 789999886542 2222222 33345557899999999999999999999999887 55
Q ss_pred HHHHHHHhCCceEee
Q 016535 371 SVVEYMAAGAIPIGK 385 (388)
Q Consensus 371 ~vlEAma~G~PVI~~ 385 (388)
.++|||+||+|||++
T Consensus 285 ~~~EA~a~g~PvI~~ 299 (365)
T TIGR00236 285 VQEEAPSLGKPVLVL 299 (365)
T ss_pred HHHHHHHcCCCEEEC
Confidence 689999999999996
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-14 Score=131.03 Aligned_cols=158 Identities=25% Similarity=0.302 Sum_probs=127.8
Q ss_pred cCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCC--CcEEEEEcccCCCCChHHHHHHHHHHHHHh
Q 016535 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTE--YPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (388)
Q Consensus 221 ~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~--~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~ 298 (388)
..+.+++.++.....+..... ..+..+++++++...+.........+ ...++++|++.+.||++.+++++..+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~ 228 (381)
T COG0438 150 LADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRG 228 (381)
T ss_pred cccEEEECCHHHHHHHHHhCC-CCCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhc
Confidence 478889999888666665543 34688899999987766421111122 378999999999999999999999998774
Q ss_pred cCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHh
Q 016535 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAA 378 (388)
Q Consensus 299 ~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~ 378 (388)
+++.+.++|.++.. .+.+.+.+++.+..+++.|+|.++.+++.++++.||++++||..|++|++++|||++
T Consensus 229 ----~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~ 299 (381)
T COG0438 229 ----PDIKLVIVGDGPER-----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA 299 (381)
T ss_pred ----CCeEEEEEcCCCcc-----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc
Confidence 45999999988653 225555777777778999999999889999999999999999889999999999999
Q ss_pred CCceEeeCCC
Q 016535 379 GAIPIGKHFK 388 (388)
Q Consensus 379 G~PVI~~~~~ 388 (388)
|+|||+++.+
T Consensus 300 g~pvi~~~~~ 309 (381)
T COG0438 300 GTPVIASDVG 309 (381)
T ss_pred CCcEEECCCC
Confidence 9999999863
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.5e-14 Score=129.25 Aligned_cols=143 Identities=13% Similarity=-0.049 Sum_probs=100.3
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
.+++..++.+|.++++|+.+++.+.+......++.++++..+....... ........++|+|++...++
T Consensus 115 ~~~~~~~~~aD~iI~~S~~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~i~yaG~l~k~~~--------- 183 (333)
T PRK09814 115 KEEIDMLNLADVLIVHSKKMKDRLVEEGLTTDKIIVQGIFDYLNDIELV--KTPSFQKKINFAGNLEKSPF--------- 183 (333)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHHcCCCcCceEeccccccccccccc--ccccCCceEEEecChhhchH---------
Confidence 3467788899999999999999998763224567666665543211111 11123468999999984321
Q ss_pred HHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcC-C-------
Q 016535 293 VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSM-I------- 364 (388)
Q Consensus 293 ~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps-~------- 364 (388)
+.+. .++++|+++|.|++.+ ...++|+|.|+++.+++.++|+. |+.+.+. .
T Consensus 184 -l~~~----~~~~~l~i~G~g~~~~---------------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~ 242 (333)
T PRK09814 184 -LKNW----SQGIKLTVFGPNPEDL---------------ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYG 242 (333)
T ss_pred -HHhc----CCCCeEEEECCCcccc---------------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccch
Confidence 1112 1689999999875432 23479999999999999999998 6544432 1
Q ss_pred ---CCCCChHHHHHHHhCCceEeeCC
Q 016535 365 ---DEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 365 ---~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.-.+|..+.|+||||+|||+++.
T Consensus 243 ~y~~~~~P~K~~~ymA~G~PVI~~~~ 268 (333)
T PRK09814 243 EYYKYNNPHKLSLYLAAGLPVIVWSK 268 (333)
T ss_pred hhhhccchHHHHHHHHCCCCEEECCC
Confidence 13577789999999999999874
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.2e-14 Score=134.55 Aligned_cols=201 Identities=12% Similarity=0.074 Sum_probs=125.6
Q ss_pred hhHHHHHHHHHhhcCCcEEEecCCcc-cccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhh
Q 016535 126 FGSVYLSWEALCKFTPLYYFDTSGYA-FTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (388)
Q Consensus 126 ~~~~~~~~~~l~~~~~Div~~~~~~~-~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (388)
+.......+.+++.+||+||... +. +... .++..++|++.+.+...+ .
T Consensus 71 ~~~~~~~~~~l~~~kPdivi~~~-~~~~~~~~a~~a~~~~ip~i~~~~~~~~--------------------------~- 122 (380)
T PRK00025 71 LKIRRRLKRRLLAEPPDVFIGID-APDFNLRLEKKLRKAGIPTIHYVSPSVW--------------------------A- 122 (380)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeC-CCCCCHHHHHHHHHCCCCEEEEeCCchh--------------------------h-
Confidence 44445555678889999987654 22 2222 234568888765442110 0
Q ss_pred hhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC-------CCCCCCCcE-EE
Q 016535 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------LERSTEYPA-II 273 (388)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~-------~~~~~~~~~-il 273 (388)
+. ... .+...+.+|.+++.|+..++.+.+. +. ++.++.|++......... .....+... ++
T Consensus 123 ~~----~~~----~~~~~~~~d~i~~~~~~~~~~~~~~-g~--~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~ 191 (380)
T PRK00025 123 WR----QGR----AFKIAKATDHVLALFPFEAAFYDKL-GV--PVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLAL 191 (380)
T ss_pred cC----chH----HHHHHHHHhhheeCCccCHHHHHhc-CC--CeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEE
Confidence 00 000 1112455799999999988888664 32 466777776422111000 011123344 34
Q ss_pred EEc-ccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc-CCCCcEEEccCCCHHHHH
Q 016535 274 SVA-QFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-KVDGNVEFYKNLLYRDLV 350 (388)
Q Consensus 274 ~vg-rl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~l~~~V~~~g~v~~~~l~ 350 (388)
+.| |.... ++++.+++|++.+.++. |+++++++|+ +.+..+++++.++++ ++. +.+.. +++.
T Consensus 192 ~~gsr~~~~~~~~~~l~~a~~~l~~~~----~~~~~ii~~~-----~~~~~~~~~~~~~~~~~~~--v~~~~----~~~~ 256 (380)
T PRK00025 192 LPGSRGQEIKRLLPPFLKAAQLLQQRY----PDLRFVLPLV-----NPKRREQIEEALAEYAGLE--VTLLD----GQKR 256 (380)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHhC----CCeEEEEecC-----ChhhHHHHHHHHhhcCCCC--eEEEc----ccHH
Confidence 445 33333 45789999999997764 7899999985 233344677777766 554 55543 5899
Q ss_pred HHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 351 KLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 351 ~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++|+.||+++.+| |.+.+|||++|+|+|+.
T Consensus 257 ~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~ 286 (380)
T PRK00025 257 EAMAAADAALAAS-----GTVTLELALLKVPMVVG 286 (380)
T ss_pred HHHHhCCEEEECc-----cHHHHHHHHhCCCEEEE
Confidence 9999999999987 88889999999999975
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.2e-13 Score=127.20 Aligned_cols=204 Identities=13% Similarity=0.033 Sum_probs=130.2
Q ss_pred hhHHHHHHHHHhhcCCcEEEecCCcccccch---hhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhh
Q 016535 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (388)
Q Consensus 126 ~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~---~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (388)
++......+.+++.+||+|+...+..+...+ ++..++|++.|+ .|.. |.. ...
T Consensus 75 ~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~--------waw---------------~~~ 130 (385)
T TIGR00215 75 LKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQV--------WAW---------------RKW 130 (385)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcH--------hhc---------------Ccc
Confidence 3344455567888999998876642222223 346789988766 3331 100 000
Q ss_pred hhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCc--cCC------CCCCCCCcEEEE
Q 016535 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ--VLP------LERSTEYPAIIS 274 (388)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~--~~~------~~~~~~~~~il~ 274 (388)
-.+...+.+|.+++.++..++.+.+. + .+..++.||+-..... +.. ....++...++.
T Consensus 131 -----------~~r~l~~~~d~v~~~~~~e~~~~~~~-g--~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilv 196 (385)
T TIGR00215 131 -----------RAKKIEKATDFLLAILPFEKAFYQKK-N--VPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLAL 196 (385)
T ss_pred -----------hHHHHHHHHhHhhccCCCcHHHHHhc-C--CCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEE
Confidence 02333455899999999998888753 3 3666788887322211 100 111133455554
Q ss_pred E-c-ccCC-CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHH
Q 016535 275 V-A-QFRP-EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (388)
Q Consensus 275 v-g-rl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~ 351 (388)
. | |..+ .|+++.+++|++.+.++. |++++++.+.. ....+.+++..++++...+|.+.+. +..+
T Consensus 197 l~GSR~aei~k~~~~ll~a~~~l~~~~----p~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~ 263 (385)
T TIGR00215 197 LPGSRGSEVEKLFPLFLKAAQLLEQQE----PDLRRVLPVVN-----FKRRLQFEQIKAEYGPDLQLHLIDG----DARK 263 (385)
T ss_pred ECCCCHHHHHHhHHHHHHHHHHHHHhC----CCeEEEEEeCC-----chhHHHHHHHHHHhCCCCcEEEECc----hHHH
Confidence 4 3 6665 789999999999998775 78888776542 1122355666666655556776643 4567
Q ss_pred HHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 352 ~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+|+.||++|.+| |.+.+|+|++|+|+|..
T Consensus 264 ~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~ 292 (385)
T TIGR00215 264 AMFAADAALLAS-----GTAALEAALIKTPMVVG 292 (385)
T ss_pred HHHhCCEEeecC-----CHHHHHHHHcCCCEEEE
Confidence 999999999999 77888999999998876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-14 Score=114.74 Aligned_cols=100 Identities=28% Similarity=0.307 Sum_probs=75.4
Q ss_pred CcEEEEEcccCCCCChHHHHH-HHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLE-AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~-a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
-+++++.|++.+.|+++.+++ ++.++.++. |+++|+++|.+++ +++++ ..++|+++|++ +
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~----p~~~l~i~G~~~~--------~l~~~-----~~~~v~~~g~~--~ 62 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH----PDIELIIIGNGPD--------ELKRL-----RRPNVRFHGFV--E 62 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS----TTEEEEEECESS---------HHCCH-----HHCTEEEE-S---H
T ss_pred cccccccccccccccccchhhhHHHHHHHHC----cCEEEEEEeCCHH--------HHHHh-----cCCCEEEcCCH--H
Confidence 367899999999999999999 999999886 8999999998542 23333 12589999999 6
Q ss_pred HHHHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeCC
Q 016535 348 DLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
++.+++++||+++.|+. .|+++.+++|||++|+|||+++.
T Consensus 63 e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~ 103 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN 103 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH
T ss_pred HHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc
Confidence 89999999999999985 67899999999999999999863
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=113.84 Aligned_cols=176 Identities=18% Similarity=0.120 Sum_probs=92.6
Q ss_pred EEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCC
Q 016535 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (388)
Q Consensus 37 I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (388)
|++++.+....||+|+++.+++++|.++| ++|++++........ .+ .. .......... .
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~---~~-----~~--------~~~~~~~~~~--~- 59 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIE---EE-----LV--------KIFVKIPYPI--R- 59 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-S---ST-----EE--------EE---TT-SS--T-
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccch---hh-----cc--------ceeeeeeccc--c-
Confidence 45666666666899999999999999999 889998876421110 00 00 0000000000 0
Q ss_pred CceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccc
Q 016535 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (388)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (388)
+. ....+.......+.+.+.+||+||.+.............++|.+.+.|.+.......
T Consensus 60 ~~---~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~~~~------------------ 118 (177)
T PF13439_consen 60 KR---FLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFERRFL------------------ 118 (177)
T ss_dssp SS-----HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--HHTT------------------
T ss_pred cc---cchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCCEEEEeCCCccccccc------------------
Confidence 00 111222233444567778999997665433222222333899999999754210000
Q ss_pred cchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCc
Q 016535 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQ 259 (388)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~ 259 (388)
......+......+.+...+.+|.++++|+.+++.+.+ ++. +.++.+||||+|++.|+
T Consensus 119 ----~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 119 ----KSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ----TTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred ----ccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 00001111222223455578999999999999999999 665 58899999999988763
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.9e-12 Score=127.04 Aligned_cols=216 Identities=13% Similarity=0.089 Sum_probs=137.2
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+|+.+.-+.+.+| +.+ ....++.+++|.|..+.+.+..+..+ . .+
T Consensus 229 ~~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r-------------------~----el---- 281 (934)
T PLN03064 229 YEEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSR-------------------S----EL---- 281 (934)
T ss_pred cCCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcH-------------------H----HH----
Confidence 455 57654444344445 333 45688999999999877766533211 0 11
Q ss_pred HHHHhccCCEEEECChhHHHHHHHH----h------------CCCCceEEEcCCCCCCCCccCCCCC------------C
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKL----W------------GIPDRIKRVYPPCDTSGLQVLPLER------------S 266 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~----~------------~~~~~~~vi~ngvd~~~~~~~~~~~------------~ 266 (388)
-..+-.+|.|=..+..-+++|.+. . +...++.+.|.|||++.|...-... -
T Consensus 282 -L~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~ 360 (934)
T PLN03064 282 -LRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF 360 (934)
T ss_pred -HHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh
Confidence 122235677777776666665431 1 1123466789999987765321111 0
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHH----Hh----cCCCC--
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS----IE----LKVDG-- 336 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~----~~----~~l~~-- 336 (388)
.++.+|+.++|+++.||+...++|++.+.++++....++.|+-+.... +.+.+..+++++.+ .+ +|-.+
T Consensus 361 ~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps-r~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~ 439 (934)
T PLN03064 361 AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT-RTDVPEYQKLTSQVHEIVGRINGRFGTLTAV 439 (934)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC-CCCcHHHHHHHHHHHHHHHHHhhhccCCCcc
Confidence 346799999999999999999999999988874433445666555332 21322223333333 22 11110
Q ss_pred cEEE-ccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHh-----CCceE
Q 016535 337 NVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAA-----GAIPI 383 (388)
Q Consensus 337 ~V~~-~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~-----G~PVI 383 (388)
-|.+ ...++.+++.++|+.||++|+||..|||+++..|||+| |.+|+
T Consensus 440 Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL 492 (934)
T PLN03064 440 PIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL 492 (934)
T ss_pred eEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEE
Confidence 1443 45589999999999999999999999999999999999 55555
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.3e-12 Score=121.67 Aligned_cols=153 Identities=17% Similarity=0.125 Sum_probs=119.7
Q ss_pred hccCCEEEECChhHHHHHHHHhCCC---CceEEEcCCCCCCCCccCCCCCCCCCcEEEEEc--ccCCCCChHHHHHHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIP---DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVA--QFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~---~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vg--rl~~~Kg~~~ll~a~~~ 293 (388)
...+|.+|+.++..++.+++.++.. .++..||.+.- ... . + ........+++++ |+ ++|.++.+|+|+.+
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~-~-~-~s~r~~~~~I~v~idrL-~ek~~~~~I~av~~ 344 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLR-L-G-QSQQLYETEIGFWIDGL-SDEELQQILQQLLQ 344 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEe-c-C-hhhcccceEEEEEcCCC-ChHHHHHHHHHHHH
Confidence 3567899999988888887766521 34566775543 222 1 1 1113346788888 99 99999999999999
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-----------------------------CcEEEccCC
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-----------------------------GNVEFYKNL 344 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-----------------------------~~V~~~g~v 344 (388)
+..++ |+++|.+.|.+.+ .+..+.+++.++++++. +.|.|.|..
T Consensus 345 ~~~~~----p~~~L~~~gy~~~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~ 417 (519)
T TIGR03713 345 YILKN----PDYELKILTYNND---NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTLT 417 (519)
T ss_pred HHhhC----CCeEEEEEEecCc---hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEecC
Confidence 99986 9999999998743 23345666666666555 689999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
+..++.+.|..+.++|.+|..|+|+ +.+||+++|+|+|-
T Consensus 418 ~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqIn 456 (519)
T TIGR03713 418 NEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQIN 456 (519)
T ss_pred CHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCeee
Confidence 8889999999999999999999999 99999999999993
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.7e-11 Score=112.82 Aligned_cols=174 Identities=16% Similarity=0.093 Sum_probs=99.8
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC-------------------------CC
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER-------------------------ST 267 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~-------------------------~~ 267 (388)
.+|+.+...||...++|+-++.+.+...+.. .-.|+|||++.+.+......+ .+
T Consensus 213 ~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~-pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d 291 (633)
T PF05693_consen 213 SIERAAAHYADVFTTVSEITAKEAEHLLKRK-PDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLD 291 (633)
T ss_dssp HHHHHHHHHSSEEEESSHHHHHHHHHHHSS---SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GG
T ss_pred HHHHHHHHhcCeeeehhhhHHHHHHHHhCCC-CCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 3789999999999999999999998877643 334799999876554321100 03
Q ss_pred CCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcE---EEEEeCCCCCccHH------H----------------
Q 016535 268 EYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPR---LQFVGSCRNKSDEE------R---------------- 321 (388)
Q Consensus 268 ~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~---l~ivG~~~~~~~~~------~---------------- 321 (388)
+..++...||.+ ..||+|.+|||+++|....+....+.+ |+++-.....-+.+ .
T Consensus 292 ~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g 371 (633)
T PF05693_consen 292 KTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIG 371 (633)
T ss_dssp GEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 357788889999 489999999999999654322123333 33433321100000 0
Q ss_pred ---------------------------------------------------HHHHHHHHHhcCCC----Cc--EEEcc-C
Q 016535 322 ---------------------------------------------------LQSLKDKSIELKVD----GN--VEFYK-N 343 (388)
Q Consensus 322 ---------------------------------------------------~~~l~~~~~~~~l~----~~--V~~~g-~ 343 (388)
.+.+...++++++. |+ |+|.+ +
T Consensus 372 ~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~y 451 (633)
T PF05693_consen 372 KRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEY 451 (633)
T ss_dssp HHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S-
T ss_pred HHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeecc
Confidence 01222222332321 34 44443 2
Q ss_pred CC------HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 344 LL------YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 344 v~------~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
++ .-+..+++..||+.|+||+||++|.+.+|+.++|+|.|+||-
T Consensus 452 L~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnL 501 (633)
T PF05693_consen 452 LSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNL 501 (633)
T ss_dssp --TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETT
T ss_pred ccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccc
Confidence 21 457888999999999999999999999999999999999983
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.8e-11 Score=96.92 Aligned_cols=156 Identities=19% Similarity=0.122 Sum_probs=80.3
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhh
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
||+++++.+++++|.++| |+|++++...+. . ..+ ....+..+..+..... .. .+.. ..
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~--~--~~~-------~~~~~~~~~~~~~~~~----~~-~~~~----~~ 58 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDP--E--DDE-------EEEDGVRVHRLPLPRR----PW-PLRL----LR 58 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---G--G--G-S-------EEETTEEEEEE--S-S----SS-GGGH----CC
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCC--c--ccc-------cccCCceEEeccCCcc----ch-hhhh----HH
Confidence 699999999999999999 888888876421 1 000 0112223333322110 00 0000 11
Q ss_pred HHHHHHHHH--hhcCCcEEEecCCcccccc-hhh-hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhh
Q 016535 128 SVYLSWEAL--CKFTPLYYFDTSGYAFTYP-LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (388)
Q Consensus 128 ~~~~~~~~l--~~~~~Div~~~~~~~~~~~-~~~-~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (388)
........+ .+.+||+||.+........ +++ ..++|.++++|.......
T Consensus 59 ~~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~--------------------------- 111 (160)
T PF13579_consen 59 FLRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG--------------------------- 111 (160)
T ss_dssp HHHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-------------------------------
T ss_pred HHHHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc---------------------------
Confidence 112223334 6789999987764221112 444 678999999995321000
Q ss_pred hhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCC
Q 016535 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP 252 (388)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ng 252 (388)
..+..+.+.++++..++.+|.++++|+..++.+.+....++++.++|||
T Consensus 112 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~g~~~~ri~vipnG 160 (160)
T PF13579_consen 112 SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRRYGVPPDRIHVIPNG 160 (160)
T ss_dssp --HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHHH---GGGEEE----
T ss_pred cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHHhCCCCCcEEEeCcC
Confidence 1122334456788999999999999999999999954335899999997
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.8e-09 Score=96.21 Aligned_cols=261 Identities=16% Similarity=0.119 Sum_probs=143.8
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhh
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
||--.-..-++++|.++|++ ++.++.+.... +.. -.... ...+..++..++.....+..+......+.
T Consensus 11 GGHv~pAlAl~~~l~~~g~~-~v~~~~~~~~~--e~~--------l~~~~-~~~~~~I~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T COG0707 11 GGHVFPALALAEELAKRGWE-QVIVLGTGDGL--EAF--------LVKQY-GIEFELIPSGGLRRKGSLKLLKAPFKLLK 78 (357)
T ss_pred ccchhHHHHHHHHHHhhCcc-EEEEecccccc--eee--------ecccc-CceEEEEecccccccCcHHHHHHHHHHHH
Confidence 45555567899999999965 56665433210 100 00011 22333333322222222221222233344
Q ss_pred HHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhh
Q 016535 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (388)
Q Consensus 128 ~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (388)
....+.+.+++.+||+|+.+.++....+ .++..++|++. |..+....
T Consensus 79 ~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~i--hEqn~~~G----------------------------- 127 (357)
T COG0707 79 GVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVII--HEQNAVPG----------------------------- 127 (357)
T ss_pred HHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEE--EecCCCcc-----------------------------
Confidence 5555666789999999999988764433 44577888775 44331110
Q ss_pred HHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCc-cCCC---CCCCCCcEEEEEcccCCC
Q 016535 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ-VLPL---ERSTEYPAIISVAQFRPE 281 (388)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~-~~~~---~~~~~~~~il~vgrl~~~ 281 (388)
.. -++..+.++.+.+.-+. . ..+..+++..+..||+..+... +... ....++.+++.+|.-
T Consensus 128 ~a-------nk~~~~~a~~V~~~f~~----~-~~~~~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~~~~~~ilV~GGS--- 192 (357)
T COG0707 128 LA-------NKILSKFAKKVASAFPK----L-EAGVKPENVVVTGIPVRPEFEELPAAEVRKDGRLDKKTILVTGGS--- 192 (357)
T ss_pred hh-------HHHhHHhhceeeecccc----c-cccCCCCceEEecCcccHHhhccchhhhhhhccCCCcEEEEECCc---
Confidence 11 11222335565554332 1 2222245788899999866554 1111 111245666666543
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEE
Q 016535 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361 (388)
Q Consensus 282 Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ 361 (388)
.|...+-+++..+..... .++.++...+ ... .+++++..++++. +++.++. +++.++|+.||++|.
T Consensus 193 ~Ga~~ln~~v~~~~~~l~---~~~~v~~~~G-----~~~-~~~~~~~~~~~~~---~~v~~f~--~dm~~~~~~ADLvIs 258 (357)
T COG0707 193 QGAKALNDLVPEALAKLA---NRIQVIHQTG-----KND-LEELKSAYNELGV---VRVLPFI--DDMAALLAAADLVIS 258 (357)
T ss_pred chhHHHHHHHHHHHHHhh---hCeEEEEEcC-----cch-HHHHHHHHhhcCc---EEEeeHH--hhHHHHHHhccEEEe
Confidence 233333333333333321 1466666554 222 4466666666554 8888997 889999999998886
Q ss_pred cCCCCCCChHHHHHHHhCCceEe
Q 016535 362 SMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 362 ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
= +-++++.|..++|+|.|-
T Consensus 259 R----aGa~Ti~E~~a~g~P~Il 277 (357)
T COG0707 259 R----AGALTIAELLALGVPAIL 277 (357)
T ss_pred C----CcccHHHHHHHhCCCEEE
Confidence 5 457899999999999985
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.20 E-value=3e-10 Score=107.54 Aligned_cols=142 Identities=11% Similarity=0.063 Sum_probs=109.8
Q ss_pred ccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhc
Q 016535 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLD 299 (388)
Q Consensus 220 ~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~ 299 (388)
.+.|.||+.++...+.+.++++...++.++|-|+-.. + +... .....+++++. +..|++++.+.++.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i~~-~---~~~~-r~~~~~l~~t~-------s~~I~~i~~Lv~~l- 304 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYLYP-F---KKDN-KYRKQALILTN-------SDQIEHLEEIVQAL- 304 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEEEe-e---cccc-CCcccEEEECC-------HHHHHHHHHHHHhC-
Confidence 5679999999999999988887556677777776421 1 1111 22355777772 89999999999996
Q ss_pred CCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhC
Q 016535 300 ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379 (388)
Q Consensus 300 ~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G 379 (388)
|+++|.| |.+.+.. ++|.++ +++ +|++.++.....++.++|..||+++..|..|++++++.||++.|
T Consensus 305 ---Pd~~f~I-ga~te~s-----~kL~~L-~~y---~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G 371 (438)
T TIGR02919 305 ---PDYHFHI-AALTEMS-----SKLMSL-DKY---DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYN 371 (438)
T ss_pred ---CCcEEEE-EecCccc-----HHHHHH-Hhc---CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcC
Confidence 9999999 8765422 377777 665 45555555545689999999999999999999999999999999
Q ss_pred CceEeeCC
Q 016535 380 AIPIGKHF 387 (388)
Q Consensus 380 ~PVI~~~~ 387 (388)
+||++.|.
T Consensus 372 ~pI~afd~ 379 (438)
T TIGR02919 372 LLILGFEE 379 (438)
T ss_pred CcEEEEec
Confidence 99999874
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.6e-09 Score=104.03 Aligned_cols=174 Identities=17% Similarity=0.107 Sum_probs=129.5
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHHHhCC--------CCceEEEcCCCCCCCCccC------------C----------
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI--------PDRIKRVYPPCDTSGLQVL------------P---------- 262 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~--------~~~~~vi~ngvd~~~~~~~------------~---------- 262 (388)
.+.+.++..||.+.++|+.-.+..++.++. ..++.-|-||+|.....+. .
T Consensus 254 nm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~ 333 (601)
T TIGR02094 254 NMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEEL 333 (601)
T ss_pred eHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhh
Confidence 356778889999999999888744432221 2347789999987643221 0
Q ss_pred ------------CC-------------------------------------CCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 263 ------------LE-------------------------------------RSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 263 ------------~~-------------------------------------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
.. ..++.+.+++++|+..+||+++++.++..
T Consensus 334 ~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~ 413 (601)
T TIGR02094 334 WEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLER 413 (601)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHH
Confidence 00 01234588999999999999999999998
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCC--ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEE-cCC-CCCCC
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH-SMI-DEHFG 369 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~--~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~-ps~-~E~~~ 369 (388)
+.+-..+...++++++.|.+.+. ..+++.+.+.+.+++...+++|.|+...+.+--..++++||++++ ||. +|+.|
T Consensus 414 l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacG 493 (601)
T TIGR02094 414 LARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASG 493 (601)
T ss_pred HHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCch
Confidence 87521100137999999998543 223467778888877567789999988877777779999999999 998 99999
Q ss_pred hHHHHHHHhCCceEeeC
Q 016535 370 ISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 370 ~~vlEAma~G~PVI~~~ 386 (388)
++-+=||..|.+.+++-
T Consensus 494 tsqMka~~nGgL~~sv~ 510 (601)
T TIGR02094 494 TSGMKAAMNGVLNLSIL 510 (601)
T ss_pred HHHHHHHHcCCceeecc
Confidence 99999999999988763
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.6e-08 Score=91.01 Aligned_cols=264 Identities=19% Similarity=0.134 Sum_probs=161.0
Q ss_pred ChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhhH
Q 016535 49 GGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGS 128 (388)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (388)
|--+.+.-|+++|.+..+++.+++-|.+. ...+ .....++- .+...+++.. .
T Consensus 60 GEv~a~~pLv~~l~~~~P~~~ilvTt~T~--Tg~e---~a~~~~~~----~v~h~YlP~D-------~------------ 111 (419)
T COG1519 60 GEVLAALPLVRALRERFPDLRILVTTMTP--TGAE---RAAALFGD----SVIHQYLPLD-------L------------ 111 (419)
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCc--cHHH---HHHHHcCC----CeEEEecCcC-------c------------
Confidence 44456677999999996667766655442 1122 22222221 1223333321 0
Q ss_pred HHHHHHHHhhcCCcEE--EecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 129 VYLSWEALCKFTPLYY--FDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 129 ~~~~~~~l~~~~~Div--~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
.....+.++..+||++ ..+.-|+..+.-++..++|.+. +.. ..+. . ...
T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~~~p~~L-vNa-RLS~---------------------r------S~~ 162 (419)
T COG1519 112 PIAVRRFLRKWRPKLLIIMETELWPNLINELKRRGIPLVL-VNA-RLSD---------------------R------SFA 162 (419)
T ss_pred hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHcCCCEEE-Eee-eech---------------------h------hhH
Confidence 1122334677899955 4445555544455577888765 221 0000 0 001
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCC-CCCCCCccCC-----CCCC-CC-CcEEEEEccc
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP-CDTSGLQVLP-----LERS-TE-YPAIISVAQF 278 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ng-vd~~~~~~~~-----~~~~-~~-~~~il~vgrl 278 (388)
.|..+..+.+.+.+..|.|++.|+..++++.+.+.. ++.+..|= .|.+.-.... .... .. ..+++..+.
T Consensus 163 ~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~--~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST- 239 (419)
T COG1519 163 RYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAK--PVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST- 239 (419)
T ss_pred HHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCc--ceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC-
Confidence 122334456777788899999999999999987542 35555552 1211110000 0000 11 456666665
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-------------CcEEEccCCC
Q 016535 279 RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-------------GNVEFYKNLL 345 (388)
Q Consensus 279 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-------------~~V~~~g~v~ 345 (388)
...--+.++++.+.+++++ |+..+++|=. ..|..+++.+++++.|+. .+|..-..+
T Consensus 240 -H~GEeei~l~~~~~l~~~~----~~~llIlVPR-----HpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm- 308 (419)
T COG1519 240 -HEGEEEIILDAHQALKKQF----PNLLLILVPR-----HPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM- 308 (419)
T ss_pred -CCchHHHHHHHHHHHHhhC----CCceEEEecC-----ChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH-
Confidence 3333345889999999996 8999999987 666678999999998775 234444444
Q ss_pred HHHHHHHHHhCcE-EEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 346 YRDLVKLLGGAVV-GIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 346 ~~~l~~~~~~adv-~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
-|+..+|+.||+ ||--|..+.-|--++|+.++|+|||.
T Consensus 309 -GEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~ 347 (419)
T COG1519 309 -GELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIF 347 (419)
T ss_pred -hHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEe
Confidence 789999999995 45567777778899999999999996
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.3e-08 Score=91.09 Aligned_cols=277 Identities=14% Similarity=0.111 Sum_probs=172.7
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 107 (388)
++|.+|+++|+|+..++... ..+.....+.+++.+.. .+|..|.-.. ...+...+++.. ++
T Consensus 253 ~~~~~~rlRvGylS~dlr~H-avg~l~~~v~e~hDRdk--fEvfay~~g~-~~~dal~~rI~a--------~~------- 313 (620)
T COG3914 253 IKRNGKRLRVGYLSSDLRSH-AVGFLLRWVFEYHDRDK--FEVFAYSLGP-PHTDALQERISA--------AV------- 313 (620)
T ss_pred ccccccceeEEEeccccccc-hHHHHHHHHHHHhchhh--eEEEEEecCC-CCchhHHHHHHH--------hh-------
Confidence 56778999999999999887 88888889999999988 7777775442 111222222211 11
Q ss_pred ccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEe-ccccchhhhhhhhcC
Q 016535 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTH-YPTISLDMISRVREG 184 (388)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h-~p~~~~~~~~~~~~~ 184 (388)
..|.+.+.... -.....+.+...||+++..++..... +...+..|+.+.+- +|. +..+ .
T Consensus 314 ~~~~~~~~~dd-----------~e~a~~I~~d~IdILvDl~g~T~d~r~~v~A~RpAPiqvswlGy~a-T~g~-p----- 375 (620)
T COG3914 314 EKWYPIGRMDD-----------AEIANAIRTDGIDILVDLDGHTVDTRCQVFAHRPAPIQVSWLGYPA-TTGS-P----- 375 (620)
T ss_pred hheeccCCcCH-----------HHHHHHHHhcCCeEEEeccCceeccchhhhhcCCCceEEeeccccc-ccCC-C-----
Confidence 12222111111 11223456778999887776443322 44456677755433 222 0000 0
Q ss_pred CccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-hCCCCceEEEcCCCCCCCC-ccCC
Q 016535 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WGIPDRIKRVYPPCDTSGL-QVLP 262 (388)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~-~~~~~~~~vi~ngvd~~~~-~~~~ 262 (388)
. .-+. -+|..+.. ++..+++.+. +..+ ..+-|.|-... .+.+
T Consensus 376 -----------------~---~DY~-----------I~D~y~vP-p~ae~yysEkl~RLp----~cy~p~d~~~~v~p~~ 419 (620)
T COG3914 376 -----------------N---MDYF-----------ISDPYTVP-PTAEEYYSEKLWRLP----QCYQPVDGFEPVTPPP 419 (620)
T ss_pred -----------------c---ceEE-----------eeCceecC-chHHHHHHHHHHhcc----cccCCCCCcccCCCCc
Confidence 0 0000 13555555 6666666553 3221 34445542211 1111
Q ss_pred CCC--CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC-CCcEE
Q 016535 263 LER--STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV-DGNVE 339 (388)
Q Consensus 263 ~~~--~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l-~~~V~ 339 (388)
... .-.+..++|.+--...|-.+.+.+-..++.+.. |+-.|++-|+|+ +.+....+++.+++.|+ .++++
T Consensus 420 sR~~lglp~~avVf~c~~n~~K~~pev~~~wmqIL~~v----P~Svl~L~~~~~---~~~~~~~l~~la~~~Gv~~eRL~ 492 (620)
T COG3914 420 SRAQLGLPEDAVVFCCFNNYFKITPEVFALWMQILSAV----PNSVLLLKAGGD---DAEINARLRDLAEREGVDSERLR 492 (620)
T ss_pred chhhcCCCCCeEEEEecCCcccCCHHHHHHHHHHHHhC----CCcEEEEecCCC---cHHHHHHHHHHHHHcCCChhhee
Confidence 111 111223344443456788888888888887775 898999988875 66788899999999999 57899
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|.+..++++..+.|.-||+++-+..| +-+.+.+||+-+|+||++-
T Consensus 493 f~p~~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~ 537 (620)
T COG3914 493 FLPPAPNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTR 537 (620)
T ss_pred ecCCCCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeee
Confidence 99999999999999999999987666 4478899999999999974
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.3e-08 Score=93.46 Aligned_cols=294 Identities=14% Similarity=0.059 Sum_probs=160.0
Q ss_pred CCCChhhHHHHHHHHHhhcCCCceEE---EEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehh
Q 016535 46 DGGGGERVLWCAVKAIQEESPDLDCI---VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMI 122 (388)
Q Consensus 46 ~gGG~~~~~~~l~~~L~~~g~~~~v~---v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (388)
.|-|-..+...++++|.++-..++|. .+.+. .....+ .+.... ....++.+++.....+..+..+
T Consensus 5 nghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~-----~~~e~~-----~ip~~g--~~~~~~sgg~~~~~~~~~~~~~ 72 (396)
T TIGR03492 5 NGHGEDLIAARIAKALLQLSPDLNLEALPLVGEG-----RAYQNL-----GIPIIG--PTKELPSGGFSYQSLRGLLRDL 72 (396)
T ss_pred CCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCC-----HHHhhC-----CCceeC--CCCCCCCCCccCCCHHHHHHHH
Confidence 45577777889999999842226766 43332 111111 121111 1111222222111111222233
Q ss_pred hh-hhhHHHHHHHHHhhc--CCcEEEecCCcccccchhhhcCCeEEEEE-eccccchhhhhhhhcCCccccCCccccccc
Q 016535 123 GQ-SFGSVYLSWEALCKF--TPLYYFDTSGYAFTYPLARIFGCRVICYT-HYPTISLDMISRVREGSSMYNNNASIAQSN 198 (388)
Q Consensus 123 ~~-~~~~~~~~~~~l~~~--~~Div~~~~~~~~~~~~~~~~~~~~i~~~-h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (388)
.. .++..+..++++++. +||+|+...++. ...++|+.++|.+++. |..... +....+. ...+
T Consensus 73 ~~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~~-------~~~~~~~------~~~~ 138 (396)
T TIGR03492 73 RAGLVGLTLGQWRALRKWAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDYY-------WESGPRR------SPSD 138 (396)
T ss_pred HhhHHHHHHHHHHHHHHHhhcCCEEEEECcHH-HHHHHHHcCCCceEEEeecccee-------ecCCCCC------ccch
Confidence 33 455566677778888 999999998855 3337788999987622 432211 0000000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCC-CCCcEEEEEcc
Q 016535 199 WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERS-TEYPAIISVAQ 277 (388)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~-~~~~~il~vgr 277 (388)
++..+.-..+..++ -.+...+.|+.+.+..+...+.+.+. + .++.++.|++-............ ....++++.|.
T Consensus 139 ~~~~~~G~~~~p~e-~n~l~~~~a~~v~~~~~~t~~~l~~~-g--~k~~~vGnPv~d~l~~~~~~~l~~~~~~lllLpGS 214 (396)
T TIGR03492 139 EYHRLEGSLYLPWE-RWLMRSRRCLAVFVRDRLTARDLRRQ-G--VRASYLGNPMMDGLEPPERKPLLTGRFRIALLPGS 214 (396)
T ss_pred hhhccCCCccCHHH-HHHhhchhhCEEeCCCHHHHHHHHHC-C--CeEEEeCcCHHhcCccccccccCCCCCEEEEECCC
Confidence 00000000101110 12334467999999999999988754 3 37888999873222211111111 22244445554
Q ss_pred cC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC--------------CcEEEc
Q 016535 278 FR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------------GNVEFY 341 (388)
Q Consensus 278 l~--~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--------------~~V~~~ 341 (388)
-. ..++++.++++++.+.++ +++++++.-.+.. +. +.+++..++.++. +++.+.
T Consensus 215 R~ae~~~~lp~~l~al~~L~~~-----~~~~~v~~~~~~~--~~---~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~ 284 (396)
T TIGR03492 215 RPPEAYRNLKLLLRALEALPDS-----QPFVFLAAIVPSL--SL---EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL 284 (396)
T ss_pred CHHHHHccHHHHHHHHHHHhhC-----CCeEEEEEeCCCC--CH---HHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence 32 357788999999999654 4777766542211 11 2455555544443 235665
Q ss_pred cCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 342 g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+. +++.++|+.||++|..| |.+..|++++|+|+|...
T Consensus 285 ~~~--~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip 322 (396)
T TIGR03492 285 LGR--GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLP 322 (396)
T ss_pred ech--HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEe
Confidence 554 78999999999999884 456699999999999753
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.03 E-value=5e-08 Score=87.83 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=71.0
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
+.++++.|..++.+....+++++..+... .++.+ ++|.+.. ..+++++.++.. +++++.+++ ++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~~-----~~i~v-v~G~~~~-----~~~~l~~~~~~~---~~i~~~~~~--~~ 234 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQIN-----ISITL-VTGSSNP-----NLDELKKFAKEY---PNIILFIDV--EN 234 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccccC-----ceEEE-EECCCCc-----CHHHHHHHHHhC---CCEEEEeCH--HH
Confidence 46788999888877677788888765211 13333 6665422 124677776654 489999998 89
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+.++|+.||+.|.+ .|.++.|++++|+|+|+-
T Consensus 235 m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i 266 (279)
T TIGR03590 235 MAELMNEADLAIGA-----AGSTSWERCCLGLPSLAI 266 (279)
T ss_pred HHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEE
Confidence 99999999999984 568999999999999974
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.6e-08 Score=90.81 Aligned_cols=268 Identities=15% Similarity=0.075 Sum_probs=139.4
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+|..... |-|-......++++| +| ++|++++.+.. .....+ .+...-.++....... .
T Consensus 1 MkIl~~v~~~--G~GH~~R~~~la~~L--rg--~~v~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~-------~ 61 (318)
T PF13528_consen 1 MKILFYVQGH--GLGHASRCLALARAL--RG--HEVTFITSGPA---PEFLKP---RFPVREIPGLGPIQEN-------G 61 (318)
T ss_pred CEEEEEeCCC--CcCHHHHHHHHHHHH--cc--CceEEEEcCCc---HHHhcc---ccCEEEccCceEeccC-------C
Confidence 7899987664 446777778899999 48 78888887641 122211 1211111111111100 0
Q ss_pred CCCceehhh-------hhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCcc
Q 016535 115 TYPRFTMIG-------QSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 115 ~~~~~~~~~-------~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
.......+. ...+......+.+.+.+||+|+.-.. +.+...++..++|.+...|..........
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~-~~~~~aa~~~giP~i~i~~~~~~~~~~~~-------- 132 (318)
T PF13528_consen 62 RLDRWKTVRNNIRWLARLARRIRREIRWLREFRPDLVISDFY-PLAALAARRAGIPVIVISNQYWFLHPNFW-------- 132 (318)
T ss_pred ccchHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcCh-HHHHHHHHhcCCCEEEEEehHHcccccCC--------
Confidence 111101111 11122222334577889998876543 33334667889999887775332110000
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHH-HHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCC
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWM-YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERS 266 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~ 266 (388)
... ..........+ .+.....++..+..+-... . ....+...+++.+....... ...
T Consensus 133 ------------~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~----~~~~~~~~~~p~~~~~~~~~---~~~ 190 (318)
T PF13528_consen 133 ------------LPW-DQDFGRLIERYIDRYHFPPADRRLALSFYPP--L----PPFFRVPFVGPIIRPEIREL---PPE 190 (318)
T ss_pred ------------cch-hhhHHHHHHHhhhhccCCcccceecCCcccc--c----cccccccccCchhccccccc---CCC
Confidence 000 00111111111 1112334444444432210 0 00112223333333222211 112
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.+.+++++|..+.. .++++++.+ ++..++++|...... -.+||++.+.. .
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~--------~~~~~~v~g~~~~~~----------------~~~ni~~~~~~-~ 241 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL--------PDYQFIVFGPNAADP----------------RPGNIHVRPFS-T 241 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC--------CCCeEEEEcCCcccc----------------cCCCEEEeecC-h
Confidence 345789999987655 556666655 678999998642111 14789988864 3
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+++.+++++||++|.-. --.++.||+++|+|+|.-
T Consensus 242 ~~~~~~m~~ad~vIs~~----G~~t~~Ea~~~g~P~l~i 276 (318)
T PF13528_consen 242 PDFAELMAAADLVISKG----GYTTISEALALGKPALVI 276 (318)
T ss_pred HHHHHHHHhCCEEEECC----CHHHHHHHHHcCCCEEEE
Confidence 78999999999998763 223499999999999874
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.7e-08 Score=91.68 Aligned_cols=250 Identities=11% Similarity=0.047 Sum_probs=130.3
Q ss_pred HHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhhHHHHHH
Q 016535 54 LWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSW 133 (388)
Q Consensus 54 ~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (388)
...++++|.+.| |+|..+++..... .+.....+ ..+..++...+-....+..+......+.......
T Consensus 18 ala~a~~l~~~g--~~v~~vg~~~~~e-----~~l~~~~g------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (352)
T PRK12446 18 NLAIIPYLKEDN--WDISYIGSHQGIE-----KTIIEKEN------IPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDAY 84 (352)
T ss_pred HHHHHHHHHhCC--CEEEEEECCCccc-----cccCcccC------CcEEEEeccCcCCCchHHHHHHHHHHHHHHHHHH
Confidence 367889999988 8888887664211 11111111 1222222111100001111222233344455566
Q ss_pred HHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHH
Q 016535 134 EALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF 210 (388)
Q Consensus 134 ~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (388)
+++++.+||+|+.+.++. .+| .+++.++|+++ |...... + .
T Consensus 85 ~i~~~~kPdvvi~~Ggy~-s~p~~~aa~~~~~p~~i--~e~n~~~-------------------------g----~---- 128 (352)
T PRK12446 85 VRIRKLKPDVIFSKGGFV-SVPVVIGGWLNRVPVLL--HESDMTP-------------------------G----L---- 128 (352)
T ss_pred HHHHhcCCCEEEecCchh-hHHHHHHHHHcCCCEEE--ECCCCCc-------------------------c----H----
Confidence 678999999999887755 333 55688999865 4322100 0 0
Q ss_pred HHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC-C-----CCCCCCcEEEEE-cccCCCCC
Q 016535 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-L-----ERSTEYPAIISV-AQFRPEKA 283 (388)
Q Consensus 211 ~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~-~-----~~~~~~~~il~v-grl~~~Kg 283 (388)
..+...+.++.+.+.-+...+ .++ .+++.+..||+..+...... . ...+++..++.+ |..+ -+.
T Consensus 129 ---~nr~~~~~a~~v~~~f~~~~~----~~~-~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~G-a~~ 199 (352)
T PRK12446 129 ---ANKIALRFASKIFVTFEEAAK----HLP-KEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLG-AKK 199 (352)
T ss_pred ---HHHHHHHhhCEEEEEccchhh----hCC-CCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccc-hHH
Confidence 122334457777765433322 223 35778889998755432111 0 111233445544 5444 333
Q ss_pred hHH-HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEc
Q 016535 284 HPL-QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHS 362 (388)
Q Consensus 284 ~~~-ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~p 362 (388)
+.. +.+++..+. .++++++.-+. + + +.+..++. +++...+++ .+++.++|+.||++|.-
T Consensus 200 in~~~~~~l~~l~-------~~~~vv~~~G~----~-~----~~~~~~~~---~~~~~~~f~-~~~m~~~~~~adlvIsr 259 (352)
T PRK12446 200 INETVREALPELL-------LKYQIVHLCGK----G-N----LDDSLQNK---EGYRQFEYV-HGELPDILAITDFVISR 259 (352)
T ss_pred HHHHHHHHHHhhc-------cCcEEEEEeCC----c-h----HHHHHhhc---CCcEEecch-hhhHHHHHHhCCEEEEC
Confidence 432 233343331 24655554321 1 1 11111111 234445664 36899999999988875
Q ss_pred CCCCCCChHHHHHHHhCCceEee
Q 016535 363 MIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 363 s~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+-+.++.|++++|+|.|..
T Consensus 260 ----~G~~t~~E~~~~g~P~I~i 278 (352)
T PRK12446 260 ----AGSNAIFEFLTLQKPMLLI 278 (352)
T ss_pred ----CChhHHHHHHHcCCCEEEE
Confidence 4577899999999999864
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.9e-08 Score=83.15 Aligned_cols=174 Identities=14% Similarity=0.037 Sum_probs=103.4
Q ss_pred eEEEec-c-ccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 36 SVAFFH-P-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 36 ~I~~~~-p-~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
+|+++- - .....||-|+.+.+|+..|+++| ++++|+|.....+.. .....+++.++++..
T Consensus 3 kIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~-----------~~~y~gv~l~~i~~~----- 64 (185)
T PF09314_consen 3 KIAIIGTRGIPARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK-----------EFEYNGVRLVYIPAP----- 64 (185)
T ss_pred eEEEEeCCCCCcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC-----------CcccCCeEEEEeCCC-----
Confidence 456552 1 12234799999999999999999 889999876532111 112233344444321
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhh--cCCcEEEecCC--cccccchhhh---cCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSG--YAFTYPLARI---FGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Div~~~~~--~~~~~~~~~~---~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
....+..+...+..+..+.....+ .+.|+++.... -++..++.++ .+.++++..|..+. .|
T Consensus 65 -~~g~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlEW---------kR-- 132 (185)
T PF09314_consen 65 -KNGSAESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLEW---------KR-- 132 (185)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcchh---------hh--
Confidence 111111222222222222222222 35677643322 1333444442 35688887776542 11
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCC
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD 254 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd 254 (388)
..+....++.+.+-|+.+.+.+|.+|+.|+.+++++++.|+ ..++++|++|.|
T Consensus 133 --------------~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGad 185 (185)
T PF09314_consen 133 --------------AKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGAD 185 (185)
T ss_pred --------------hhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCCC
Confidence 33334555566667999999999999999999999999997 468889999976
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.2e-09 Score=97.31 Aligned_cols=213 Identities=14% Similarity=0.122 Sum_probs=139.5
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+|..+.-+...+| ..+ ....++.+++|.|..+.+.+..+..+ ..+
T Consensus 121 ~~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r-----------------------~ei---- 173 (474)
T PRK10117 121 LKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPH-----------------------DEL---- 173 (474)
T ss_pred cCCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCCh-----------------------HHH----
Confidence 455 57654443334445 333 34578999999999877766543311 011
Q ss_pred HHHHhccCCEEEECChhHHHHHHHH-----------------hCCCCceEEEcCCCCCCCCccCCCC---C--------C
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKL-----------------WGIPDRIKRVYPPCDTSGLQVLPLE---R--------S 266 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~-----------------~~~~~~~~vi~ngvd~~~~~~~~~~---~--------~ 266 (388)
-..+-.+|.|-..+..-++++.+. ++...++.+.|-|+|++.+...-.. . -
T Consensus 174 -l~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~ 252 (474)
T PRK10117 174 -LEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAEL 252 (474)
T ss_pred -HHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHc
Confidence 111234566666666555555431 1112346677889997765432110 0 0
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccH----HHHHHHHHHHHh----cCCCC--
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE----ERLQSLKDKSIE----LKVDG-- 336 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~----~~~~~l~~~~~~----~~l~~-- 336 (388)
.+...|+-+.|++.-||+..=++|++.+.++++....++.|+-+... .+++. ++..++++.+.+ .|-.+
T Consensus 253 ~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p-sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~ 331 (474)
T PRK10117 253 KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT-SRGDVQAYQDIRHQLETEAGRINGKYGQLGWT 331 (474)
T ss_pred CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC-CCCccHHHHHHHHHHHHHHHHHHhccCCCCce
Confidence 34578999999999999999999999999998887788999988753 33332 233444444443 22211
Q ss_pred cEEE-ccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 337 NVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 337 ~V~~-~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
-|.+ ...++++++.++|+.||+++.+|..+|+.++..|+.+|-.
T Consensus 332 Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~ 376 (474)
T PRK10117 332 PLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD 376 (474)
T ss_pred eEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeec
Confidence 1444 4778999999999999999999999999999999999965
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-07 Score=95.66 Aligned_cols=117 Identities=18% Similarity=0.139 Sum_probs=95.0
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCc--cHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS--DEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~--~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
..++++.|+..+||.++++..+..+.+-..+...+++++++|.+.+.. .+++.+.+.+.+++...+++|.|+...+.+
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~ 558 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMA 558 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHH
Confidence 479999999999999999999888865221101369999999984432 245667778888766777899999888777
Q ss_pred HHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 348 DLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
--..+++.||+.+.||. .|+.|++-+-||..|.+-+++-
T Consensus 559 lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvl 599 (778)
T cd04299 559 LARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVL 599 (778)
T ss_pred HHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecc
Confidence 77779999999999998 9999999999999999988763
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.92 E-value=3e-08 Score=94.95 Aligned_cols=215 Identities=16% Similarity=0.122 Sum_probs=116.9
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+|..+.-+.+.+| +.+ ....++.+++|.|....+.+..+..+ ..
T Consensus 139 ~~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r-----------------------~e----- 190 (474)
T PF00982_consen 139 YRPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWR-----------------------EE----- 190 (474)
T ss_dssp --TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTTH-----------------------HH-----
T ss_pred CcCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCcH-----------------------HH-----
Confidence 445 46644433344445 333 45788999999998777765432210 01
Q ss_pred HHHHhccCCEEEECChhHHHHHHH----HhCC--------------CCceEEEcCCCCCCCCccCCC--CC---------
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEK----LWGI--------------PDRIKRVYPPCDTSGLQVLPL--ER--------- 265 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~----~~~~--------------~~~~~vi~ngvd~~~~~~~~~--~~--------- 265 (388)
.-..+-.+|.|-..+..-+++|.+ ..+. ...+.+.|-|+|++.+..... +.
T Consensus 191 iL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~ 270 (474)
T PF00982_consen 191 ILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELRE 270 (474)
T ss_dssp HHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHH
T ss_pred HHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHH
Confidence 122335678888888888777643 2222 123667788888765542110 00
Q ss_pred -CCC-CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccH---HHHHHHHHHHHh----cCCC-
Q 016535 266 -STE-YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE---ERLQSLKDKSIE----LKVD- 335 (388)
Q Consensus 266 -~~~-~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~---~~~~~l~~~~~~----~~l~- 335 (388)
-.+ ...|+-+.|++.-||+..=+.|++++.++++....++.|+-++........ ++.+++.+++.+ +|-.
T Consensus 271 ~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~ 350 (474)
T PF00982_consen 271 KFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPD 350 (474)
T ss_dssp HTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTT
T ss_pred hcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCC
Confidence 034 388999999999999999999999999998777778999988874333222 244444444442 3322
Q ss_pred --CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc
Q 016535 336 --GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381 (388)
Q Consensus 336 --~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P 381 (388)
+-+.+.+.++.+++.++|+.||+++.+|..+|+.++..|+.+|...
T Consensus 351 ~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~ 398 (474)
T PF00982_consen 351 WTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDD 398 (474)
T ss_dssp B-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-T
T ss_pred ceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecC
Confidence 2244557799999999999999999999999999999999999765
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=2e-07 Score=87.96 Aligned_cols=210 Identities=16% Similarity=0.075 Sum_probs=142.4
Q ss_pred cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHH
Q 016535 142 LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV 218 (388)
Q Consensus 142 Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (388)
|+|..+.-+.+.+| ..+ ....++.+++|.|..+++++.-+..+ ..+ -..
T Consensus 149 DiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r-----------------------~eI-----l~g 200 (486)
T COG0380 149 DIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWR-----------------------EEI-----LEG 200 (486)
T ss_pred CEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchH-----------------------HHH-----HHH
Confidence 67754443344455 443 34578899999999877776532211 111 122
Q ss_pred hccCCEEEECChhHHHHHHHH----h--------------CCCCceEEEcCCCCCCCCccCCCCCC-------------C
Q 016535 219 GSCADLAMVNSSWTQSHIEKL----W--------------GIPDRIKRVYPPCDTSGLQVLPLERS-------------T 267 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~----~--------------~~~~~~~vi~ngvd~~~~~~~~~~~~-------------~ 267 (388)
+-.+|.|-.+++.-++.|... . +...++...|-|+|+..+........ .
T Consensus 201 ll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~ 280 (486)
T COG0380 201 LLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGR 280 (486)
T ss_pred hhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcC
Confidence 345677777777777665431 1 11245667788999876654221111 3
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHH---HHHHHHHHHh-------cCCCCc
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER---LQSLKDKSIE-------LKVDGN 337 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~---~~~l~~~~~~-------~~l~~~ 337 (388)
+...++.+-|++.-||+..=+.|++++...++....++.++-++.....+-.+| ..++.+.+.+ .+..+-
T Consensus 281 ~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv 360 (486)
T COG0380 281 NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPV 360 (486)
T ss_pred CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCccee
Confidence 368899999999999999999999999999877778899999998755544443 3333333332 222233
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhC
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G 379 (388)
..+.-.++.+++.++|+.||+++.+|..||+.++..|+.+|-
T Consensus 361 ~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q 402 (486)
T COG0380 361 HYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQ 402 (486)
T ss_pred EEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhh
Confidence 344567899999999999999999999999999999999874
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.9e-07 Score=95.57 Aligned_cols=214 Identities=13% Similarity=0.058 Sum_probs=141.1
Q ss_pred cCC--cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHH
Q 016535 139 FTP--LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW 213 (388)
Q Consensus 139 ~~~--Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (388)
.++ |+|+.+.-+...+| +.+ ....++.+++|.|..+.+++..+.-+ . .
T Consensus 198 ~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r-------------------~----e---- 250 (854)
T PLN02205 198 INPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-------------------E----E---- 250 (854)
T ss_pred hCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcH-------------------H----H----
Confidence 355 67754444344455 443 45678899999999877765532211 0 1
Q ss_pred HHHHHhccCCEEEECChhHHHHHHH----Hh----------------CCCCceEEEcCCCCCCCCccCCCCC--------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEK----LW----------------GIPDRIKRVYPPCDTSGLQVLPLER-------- 265 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~----~~----------------~~~~~~~vi~ngvd~~~~~~~~~~~-------- 265 (388)
.-..+-.+|.|=..+..-+++|.+ .. +....+.+.|-|+|+..+.......
T Consensus 251 -iL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~ 329 (854)
T PLN02205 251 -LLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKE 329 (854)
T ss_pred -HHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHH
Confidence 112224567777776666666544 11 1123466788899877654321100
Q ss_pred ---C---CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCcc---HHHHHHHHHHHHh----c
Q 016535 266 ---S---TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD---EERLQSLKDKSIE----L 332 (388)
Q Consensus 266 ---~---~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~---~~~~~~l~~~~~~----~ 332 (388)
. ++...++-+.|++.-||+..=+.|++++.++++....++.|+.+....-.+. .++..++.+.+.+ +
T Consensus 330 l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~f 409 (854)
T PLN02205 330 LIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETF 409 (854)
T ss_pred HHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhc
Confidence 0 2467899999999999999999999999999877677788888875432211 2233344444443 2
Q ss_pred CCC--CcEEEc-cCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC
Q 016535 333 KVD--GNVEFY-KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA 380 (388)
Q Consensus 333 ~l~--~~V~~~-g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~ 380 (388)
|-. .-|+++ ..++.+++.++|+.||+++.++..+|+.++..|+.+|..
T Consensus 410 g~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~ 460 (854)
T PLN02205 410 GKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQ 460 (854)
T ss_pred CCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEcc
Confidence 221 125554 778999999999999999999999999999999999854
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-05 Score=72.97 Aligned_cols=47 Identities=19% Similarity=0.068 Sum_probs=39.2
Q ss_pred CCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 335 ~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
++|+.+.++.+ +++.++|..||++|.-+-. .++.||+++|+|+|...
T Consensus 228 ~~~v~~~~~~~-~~~~~~l~~ad~vI~~~G~----~t~~Ea~~~g~P~l~ip 274 (321)
T TIGR00661 228 NENVEIRRITT-DNFKELIKNAELVITHGGF----SLISEALSLGKPLIVIP 274 (321)
T ss_pred CCCEEEEECCh-HHHHHHHHhCCEEEECCCh----HHHHHHHHcCCCEEEEc
Confidence 47899999876 6899999999999987532 36899999999999753
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.9e-06 Score=75.14 Aligned_cols=145 Identities=14% Similarity=0.086 Sum_probs=94.9
Q ss_pred ccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccC------CCCCCCCCcEEEEEcc-cCC-CCChHHHHHH
Q 016535 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVL------PLERSTEYPAIISVAQ-FRP-EKAHPLQLEA 290 (388)
Q Consensus 220 ~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~------~~~~~~~~~~il~vgr-l~~-~Kg~~~ll~a 290 (388)
+..|.+++.=+...+.+++. + .++..+.||. |....... ..-...++...+..|. -.. .+.++.++++
T Consensus 132 ~~~D~ll~ifPFE~~~y~~~-g--~~~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l~a 208 (373)
T PF02684_consen 132 KYVDHLLVIFPFEPEFYKKH-G--VPVTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFLEA 208 (373)
T ss_pred HHHhheeECCcccHHHHhcc-C--CCeEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHHHH
Confidence 44799999999998888775 3 3677888886 32111110 0001123344555554 333 5666899999
Q ss_pred HHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCCh
Q 016535 291 FSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGI 370 (388)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~ 370 (388)
++.+++++ |++++++... +....+.+.+..++.+....+... .++-.+.++.||+.+..| |.
T Consensus 209 a~~l~~~~----p~l~fvvp~a-----~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~m~~ad~al~~S-----GT 270 (373)
T PF02684_consen 209 AKLLKKQR----PDLQFVVPVA-----PEVHEELIEEILAEYPPDVSIVII----EGESYDAMAAADAALAAS-----GT 270 (373)
T ss_pred HHHHHHhC----CCeEEEEecC-----CHHHHHHHHHHHHhhCCCCeEEEc----CCchHHHHHhCcchhhcC-----CH
Confidence 99999886 8999998875 333333455555554443233332 246677899999888765 88
Q ss_pred HHHHHHHhCCceEee
Q 016535 371 SVVEYMAAGAIPIGK 385 (388)
Q Consensus 371 ~vlEAma~G~PVI~~ 385 (388)
+.+|++.+|+|.|..
T Consensus 271 aTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 271 ATLEAALLGVPMVVA 285 (373)
T ss_pred HHHHHHHhCCCEEEE
Confidence 999999999998864
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.0001 Score=67.50 Aligned_cols=260 Identities=13% Similarity=0.098 Sum_probs=138.0
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|+|++=.-.. ..-.+...++++|.++| |+|.+.+.+. + ...+..+.++++. ..+...+
T Consensus 1 MkIwiDi~~p----~hvhfFk~~I~eL~~~G--heV~it~R~~----~-~~~~LL~~yg~~y------~~iG~~g----- 58 (335)
T PF04007_consen 1 MKIWIDITHP----AHVHFFKNIIRELEKRG--HEVLITARDK----D-ETEELLDLYGIDY------IVIGKHG----- 58 (335)
T ss_pred CeEEEECCCc----hHHHHHHHHHHHHHhCC--CEEEEEEecc----c-hHHHHHHHcCCCe------EEEcCCC-----
Confidence 5666543222 34466788999999999 8888877664 2 2233344444422 2222110
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (388)
......+...........+.+.+.+||+++...+ +....+++..++|.+.+..++....
T Consensus 59 -~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s-~~a~~va~~lgiP~I~f~D~e~a~~------------------- 117 (335)
T PF04007_consen 59 -DSLYGKLLESIERQYKLLKLIKKFKPDVAISFGS-PEAARVAFGLGIPSIVFNDTEHAIA------------------- 117 (335)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHhhCCCEEEecCc-HHHHHHHHHhCCCeEEEecCchhhc-------------------
Confidence 0011112222222333445567789999886544 2222277789999999887643100
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCC----CCccCCC-----CC
Q 016535 195 AQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS----GLQVLPL-----ER 265 (388)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~----~~~~~~~-----~~ 265 (388)
..+.....+|.+++.+-.-.+.+.+. +.. +...-+||+++. .|++.+. ..
T Consensus 118 -------------------~~~Lt~Pla~~i~~P~~~~~~~~~~~-G~~-~~i~~y~G~~E~ayl~~F~Pd~~vl~~lg~ 176 (335)
T PF04007_consen 118 -------------------QNRLTLPLADVIITPEAIPKEFLKRF-GAK-NQIRTYNGYKELAYLHPFKPDPEVLKELGL 176 (335)
T ss_pred -------------------cceeehhcCCeeECCcccCHHHHHhc-CCc-CCEEEECCeeeEEeecCCCCChhHHHHcCC
Confidence 12233445889988876555555444 432 222338888752 2443211 11
Q ss_pred CCCCcEEEEEcccCC-----CCChHH-HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 016535 266 STEYPAIISVAQFRP-----EKAHPL-QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (388)
Q Consensus 266 ~~~~~~il~vgrl~~-----~Kg~~~-ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~ 339 (388)
++..+++. |..+ .+|-.. +-+.++.+.+.. +. ++++-...++ .+..++.+ +.
T Consensus 177 -~~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~-----~~-vV~ipr~~~~---------~~~~~~~~----~~ 234 (335)
T PF04007_consen 177 -DDEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYG-----RN-VVIIPRYEDQ---------RELFEKYG----VI 234 (335)
T ss_pred -CCCCEEEE--EeccccCeeecCccchHHHHHHHHHhhC-----ce-EEEecCCcch---------hhHHhccC----cc
Confidence 22233331 2222 223222 335666665552 33 5555543211 12223321 44
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+.... -+..+++..||++|-- .|.-..||...|+|.|.+.+
T Consensus 235 i~~~~--vd~~~Ll~~a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~ 275 (335)
T PF04007_consen 235 IPPEP--VDGLDLLYYADLVIGG-----GGTMAREAALLGTPAISCFP 275 (335)
T ss_pred ccCCC--CCHHHHHHhcCEEEeC-----CcHHHHHHHHhCCCEEEecC
Confidence 43322 2455799999998864 35667999999999998754
|
They are found in archaea and some bacteria and have no known function. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.00018 Score=67.44 Aligned_cols=210 Identities=14% Similarity=0.046 Sum_probs=112.3
Q ss_pred HHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 130 YLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 130 ~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
....+.+.+.+||+++.......++. .+...++|++ ++|.-..+.+. ....
T Consensus 83 ~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~-HveaG~rs~~~-------------------------~eE~ 136 (365)
T TIGR03568 83 IGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIA-HIHGGEVTEGA-------------------------IDES 136 (365)
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEE-EEECCccCCCC-------------------------chHH
Confidence 33445678889998865643222332 4457788876 34432111000 0011
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCC-CCCCCC---ccC-----CCCCC-CCCcEEEEEc
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP-CDTSGL---QVL-----PLERS-TEYPAIISVA 276 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ng-vd~~~~---~~~-----~~~~~-~~~~~il~vg 276 (388)
.++. .-+.++..++.++..++.+.+.+-.+.++.++.|. +|.-.. ... ...-. .++..++..-
T Consensus 137 ~r~~-------i~~la~l~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~H 209 (365)
T TIGR03568 137 IRHA-------ITKLSHLHFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFH 209 (365)
T ss_pred HHHH-------HHHHHhhccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeC
Confidence 1222 22346777888888888887654335677777664 442111 000 00001 1234444554
Q ss_pred ccC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH
Q 016535 277 QFR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG 354 (388)
Q Consensus 277 rl~--~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~ 354 (388)
+-. .....+.+-+.++.+.+.. .++ +++....+..+....+.+++...+ .+++.+.+.++..++..+++
T Consensus 210 p~~~~~~~~~~~l~~li~~L~~~~----~~~--~vi~P~~~p~~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~ 280 (365)
T TIGR03568 210 PVTLEKESAEEQIKELLKALDELN----KNY--IFTYPNADAGSRIINEAIEEYVNE---HPNFRLFKSLGQERYLSLLK 280 (365)
T ss_pred CCcccccCchHHHHHHHHHHHHhc----cCC--EEEEeCCCCCchHHHHHHHHHhcC---CCCEEEECCCChHHHHHHHH
Confidence 432 3333344445555554331 244 334222111133333444444321 36899999999999999999
Q ss_pred hCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 355 GAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 355 ~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.|+++|--|. | .+.||.++|+|+|+-.
T Consensus 281 ~a~~vitdSS----g-gi~EA~~lg~Pvv~l~ 307 (365)
T TIGR03568 281 NADAVIGNSS----S-GIIEAPSFGVPTINIG 307 (365)
T ss_pred hCCEEEEcCh----h-HHHhhhhcCCCEEeec
Confidence 9999884332 2 3489999999999643
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.9e-05 Score=71.43 Aligned_cols=89 Identities=15% Similarity=0.059 Sum_probs=57.2
Q ss_pred CCCcEEEEEcccCCC---CChHHHHHHHHHHHHHhcCCCCCcEEE-EEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 267 TEYPAIISVAQFRPE---KAHPLQLEAFSVALRKLDADLPRPRLQ-FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 267 ~~~~~il~vgrl~~~---Kg~~~ll~a~~~l~~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
.++.+++..|..... +-...++++++.+ +.+++ .+|..... . ...++||.+.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---------~~~~i~~~g~~~~~-------~-------~~~~~~v~~~~ 294 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL---------GQRAILSLGWGGLG-------A-------EDLPDNVRVVD 294 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc---------CCeEEEEccCcccc-------c-------cCCCCceEEeC
Confidence 345677788887542 2333444444433 44544 44533211 1 23568999999
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 343 ~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++|.. +++..||++|+- +-..++.||+++|+|+|..
T Consensus 295 ~~p~~---~ll~~~d~~I~h----gG~~t~~eal~~GvP~v~~ 330 (401)
T cd03784 295 FVPHD---WLLPRCAAVVHH----GGAGTTAAALRAGVPQLVV 330 (401)
T ss_pred CCCHH---HHhhhhheeeec----CCchhHHHHHHcCCCEEee
Confidence 98754 468889999943 3357899999999999875
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00022 Score=63.26 Aligned_cols=170 Identities=13% Similarity=0.165 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHhccCCEEEECChhHHHHHHH-HhCCCCceEEEcCCCCC-CCCccCCCCCCCCCcEEEEEcccC-CCC
Q 016535 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK-LWGIPDRIKRVYPPCDT-SGLQVLPLERSTEYPAIISVAQFR-PEK 282 (388)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~-~~~~~~~~~vi~ngvd~-~~~~~~~~~~~~~~~~il~vgrl~-~~K 282 (388)
+..+++..+.+.+.++...+++ .......+.+ .++.+.+. ++.|... +..........++...-+.+|+-+ +..
T Consensus 83 lk~rlfy~lRR~aq~rvg~v~a-trGD~~~~a~~~~~v~~~l--lyfpt~m~~~l~~~~~~~~~~~~~tIlvGNSgd~SN 159 (322)
T PRK02797 83 LKFRLFYPLRRLAQKRVGHVFA-TRGDLSYFAQRHPKVPGSL--LYFPTRMDPSLNTMANDRQRAGKMTILVGNSGDRSN 159 (322)
T ss_pred hhHHHHHHHHHHHHhhcCeEEE-ecchHHHHHHhcCCCCccE--EecCCcchhhhccccccccCCCceEEEEeCCCCCcc
Confidence 3445666678888999999999 5555566544 44444444 3333221 111111111112234555667755 567
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc-cCCCHHHHHHHHHhCcEEEE
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY-KNLLYRDLVKLLGGAVVGIH 361 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~-g~v~~~~l~~~~~~adv~v~ 361 (388)
++..+++++.+... .++++++-=+.+.. +.+|.+++++.++++--.+++..+ ..+|.+|..++++.||+.++
T Consensus 160 ~Hie~L~~l~~~~~------~~v~ii~PlsYp~g-n~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f 232 (322)
T PRK02797 160 RHIEALRALHQQFG------DNVKIIVPMGYPAN-NQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYF 232 (322)
T ss_pred cHHHHHHHHHHHhC------CCeEEEEECCcCCC-CHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEE
Confidence 77777777766633 48888887665433 788999999999998765788775 88899999999999998887
Q ss_pred cC-CCCCCChHHHHHHHhCCceEeeC
Q 016535 362 SM-IDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 362 ps-~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
-- +-+++|..+ -.+..|+||+-+.
T Consensus 233 ~~~RQQgiGnl~-lLi~~G~~v~l~r 257 (322)
T PRK02797 233 IFARQQGIGTLC-LLIQLGKPVVLSR 257 (322)
T ss_pred eechhhHHhHHH-HHHHCCCcEEEec
Confidence 65 557787654 4688999998764
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00015 Score=65.12 Aligned_cols=168 Identities=14% Similarity=0.134 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCC--CCCCCCccCCCCCCCCCcEEEEEcccC-CCCCh
Q 016535 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP--CDTSGLQVLPLERSTEYPAIISVAQFR-PEKAH 284 (388)
Q Consensus 208 ~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ng--vd~~~~~~~~~~~~~~~~~il~vgrl~-~~Kg~ 284 (388)
.+++..+.+.+.++...+++ .......+++.++.. ....++.| +|...... ......+...-+.+|+-+ +..++
T Consensus 124 ~rlfy~lRr~aq~rvg~V~a-t~GDl~~~~q~~~~~-~~~~lyfPt~m~~~~~~~-~~~~~~~~~ltILvGNSgd~sNnH 200 (360)
T PF07429_consen 124 FRLFYFLRRLAQKRVGHVFA-TRGDLAYFQQRYPRV-PASLLYFPTRMDPALTLS-EKNKKNKGKLTILVGNSGDPSNNH 200 (360)
T ss_pred hhHHHHHHHHHHhhcCeEEE-EcchHHHHHHHcCCC-CceEEEcCCCCchhhhcc-ccccCCCCceEEEEcCCCCCCccH
Confidence 34445567777888888876 456667777777642 22244444 44322221 111112234455666655 56667
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc-cCCCHHHHHHHHHhCcEEEEcC
Q 016535 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY-KNLLYRDLVKLLGGAVVGIHSM 363 (388)
Q Consensus 285 ~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~-g~v~~~~l~~~~~~adv~v~ps 363 (388)
..+++++++.. +.++++++-=+.+.. +.+|.+++.+.++++--.+++..+ .++|.+|..++++.||+.++..
T Consensus 201 ieaL~~L~~~~------~~~~kIivPLsYg~~-n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~ 273 (360)
T PF07429_consen 201 IEALEALKQQF------GDDVKIIVPLSYGAN-NQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNH 273 (360)
T ss_pred HHHHHHHHHhc------CCCeEEEEECCCCCc-hHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEee
Confidence 77777666532 247887775544332 678999999999988555688765 7999999999999999999987
Q ss_pred C-CCCCChHHHHHHHhCCceEeeC
Q 016535 364 I-DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 364 ~-~E~~~~~vlEAma~G~PVI~~~ 386 (388)
. -+++|.. .-.+.+|+||+-+.
T Consensus 274 ~RQQgiGnI-~lLl~~G~~v~L~~ 296 (360)
T PF07429_consen 274 NRQQGIGNI-CLLLQLGKKVFLSR 296 (360)
T ss_pred chhhhHhHH-HHHHHcCCeEEEec
Confidence 5 4677754 45789999998765
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.1e-05 Score=71.26 Aligned_cols=189 Identities=12% Similarity=0.022 Sum_probs=90.2
Q ss_pred eEEEe----ccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh-----hh------ceec----
Q 016535 36 SVAFF----HPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-----RF------GVEL---- 96 (388)
Q Consensus 36 ~I~~~----~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~-----~~------~i~~---- 96 (388)
||+++ .|....| |.+.++..|+++|+++| ++|.|+++.+ ..+..+..+ .+ .+.+
T Consensus 1 kIl~vt~E~~P~~k~G-GLgdv~~~L~kaL~~~G--~~V~Vi~P~y----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVG-GLGDVVGSLPKALAKQG--HDVRVIMPKY----GFIDEEYFQLEPVRRLSVPFGGPVPVGVWY 73 (245)
T ss_dssp EEEEE-S-BTTTB-SS-HHHHHHHHHHHHHHHTT---EEEEEEE-T----HHHHHHCTTEEEEEEES-STTCEEEEE---
T ss_pred CEEEEEcccCcccccC-cHhHHHHHHHHHHHhcC--CeEEEEEccc----hhhhhhhhcceEEEEeccccccccccccce
Confidence 45555 3555555 99999999999999999 8899998875 333332210 00 0100
Q ss_pred --------CCCCeeEEecccccccc-CCCCc-----eehhhhhhhHHHHHHHHHhh--cCCcEEEecCCcccccc-hhhh
Q 016535 97 --------LHPPKVVHLYRRKWIEE-STYPR-----FTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LARI 159 (388)
Q Consensus 97 --------~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~l~~--~~~Div~~~~~~~~~~~-~~~~ 159 (388)
.++++++.+....+..+ ..+.. .....++..........+.+ .+|||||++.+.....| +.+.
T Consensus 74 ~~~v~~~~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~ 153 (245)
T PF08323_consen 74 EVRVYRYPVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKE 153 (245)
T ss_dssp -EEEEEEEETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHH
T ss_pred EEEEEEEEcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhcc
Confidence 13445555444333221 12210 11111111111222333444 58999998877555555 3342
Q ss_pred -c-------CCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChh
Q 016535 160 -F-------GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSW 231 (388)
Q Consensus 160 -~-------~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~ 231 (388)
. ++|+++++|...+.-....... ...++.. ..+...-...+....+ +.+..+..||.++++|+.
T Consensus 154 ~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~-~~~gl~~------~~~~~~~~~~~~~~in-~lk~gi~~AD~v~TVS~~ 225 (245)
T PF08323_consen 154 RYQQDPFFANIPTVFTIHNLEYQGIFPPEDL-KALGLPD------EYFQNLDEYEFYGQIN-FLKAGIVYADKVTTVSPT 225 (245)
T ss_dssp CCSS------SEEEEEESSTT---EEEGGGG-GCTT-GG------GGS-STTTTEETTEEE-HHHHHHHHSSEEEESSHH
T ss_pred ccccccccccceeEEEEcccccCCcCCHHHH-HHcCCCH------HHhccccccccccccC-HHHHHHHhcCEeeeCCHH
Confidence 2 5999999997432110000000 0000000 0000000000001111 355778899999999999
Q ss_pred HHHHHHHH
Q 016535 232 TQSHIEKL 239 (388)
Q Consensus 232 ~~~~l~~~ 239 (388)
.++++.+.
T Consensus 226 Ya~Ei~~~ 233 (245)
T PF08323_consen 226 YAREIQTP 233 (245)
T ss_dssp HHHHTTSH
T ss_pred HHHHHhCc
Confidence 99988764
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.8e-06 Score=77.51 Aligned_cols=180 Identities=12% Similarity=0.099 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCC------------------
Q 016535 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERS------------------ 266 (388)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~------------------ 266 (388)
..|.+. .+++.+...|+...++|+-+.-+-+.... .++-.+.|||.+...|+....-++
T Consensus 238 ~IYHrY--C~ERaa~h~AhVFTTVSeITa~EAeHlLk-RKPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~ 314 (692)
T KOG3742|consen 238 QIYHRY--CLERAAAHTAHVFTTVSEITALEAEHLLK-RKPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFH 314 (692)
T ss_pred hhHHHH--HHHHHhhhhhhhhhhHHHHHHHHHHHHHh-cCCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 444443 47899999999999999887754443332 233447899998766542111000
Q ss_pred -------CCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcE---EEEEeCCCCCccH------HHHHHHHHHH
Q 016535 267 -------TEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPR---LQFVGSCRNKSDE------ERLQSLKDKS 329 (388)
Q Consensus 267 -------~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~---l~ivG~~~~~~~~------~~~~~l~~~~ 329 (388)
.+..+++..||.+ ..||-|.+||++++|.-..+..+.+.+ |.|.-...+.-+- ...++|...+
T Consensus 315 GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv 394 (692)
T KOG3742|consen 315 GHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTV 394 (692)
T ss_pred ccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHH
Confidence 4457888889998 589999999999998655433223322 2232221111010 0111111111
Q ss_pred H-------------------------------------------------------------------hcCC----CCcE
Q 016535 330 I-------------------------------------------------------------------ELKV----DGNV 338 (388)
Q Consensus 330 ~-------------------------------------------------------------------~~~l----~~~V 338 (388)
. ..++ .|+|
T Consensus 395 ~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRV 474 (692)
T KOG3742|consen 395 NEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRV 474 (692)
T ss_pred HHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccce
Confidence 0 0000 0333
Q ss_pred --EEccC-CC------HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 339 --EFYKN-LL------YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 339 --~~~g~-v~------~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.|++. ++ .-|..++...|++.|+||++|++|.+..|.--+|.|-|+||-
T Consensus 475 KvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNl 532 (692)
T KOG3742|consen 475 KVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNL 532 (692)
T ss_pred EEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccc
Confidence 33321 11 236677899999999999999999999999999999999974
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00039 Score=66.06 Aligned_cols=45 Identities=20% Similarity=0.006 Sum_probs=36.4
Q ss_pred CCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 334 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+++++.+.+++++. +++..||++|+.+- ..++.||+++|+|.|+.
T Consensus 273 ~~~~v~~~~~~p~~---~ll~~~~~~I~hgG----~~t~~Eal~~G~P~v~~ 317 (392)
T TIGR01426 273 LPPNVEVRQWVPQL---EILKKADAFITHGG----MNSTMEALFNGVPMVAV 317 (392)
T ss_pred CCCCeEEeCCCCHH---HHHhhCCEEEECCC----chHHHHHHHhCCCEEec
Confidence 45789999999764 57899999997542 24789999999999984
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.001 Score=63.29 Aligned_cols=301 Identities=13% Similarity=0.075 Sum_probs=145.9
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchh---------HHHHhhhhhc-eecCCCCeeEE
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDS---------LLARAVDRFG-VELLHPPKVVH 104 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~---------~~~~~~~~~~-i~~~~~~~~~~ 104 (388)
|||++.--|...--|-|=++..++..|.++..+.+++|++..+..+..- +.-..++.++ ..... ++..
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~ 78 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVG--RVKK 78 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccch--hHHH
Confidence 5777775555433389999999999999999999999999876332210 0000011000 00000 0000
Q ss_pred eccccccccCCCCceeh--hhhh--hh-HHHHHHHHHhhcCCcEEEecCCcccc---------cc-hhhhcCCeEEEEEe
Q 016535 105 LYRRKWIEESTYPRFTM--IGQS--FG-SVYLSWEALCKFTPLYYFDTSGYAFT---------YP-LARIFGCRVICYTH 169 (388)
Q Consensus 105 ~~~~~~~~~~~~~~~~~--~~~~--~~-~~~~~~~~l~~~~~Div~~~~~~~~~---------~~-~~~~~~~~~i~~~h 169 (388)
..++.|.+.-.+.+... +... +. ......+.+. +.|+++...|..+. +. .+++.++|++.+-+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gq 156 (426)
T PRK10017 79 VLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLS--GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGH 156 (426)
T ss_pred HHHhhhhHHHHHhhhccccccccccchhhHHHHHHHHH--hCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECC
Confidence 00001110000000000 0000 00 0011112222 57888766553322 11 33466777777655
Q ss_pred ccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEE
Q 016535 170 YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV 249 (388)
Q Consensus 170 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi 249 (388)
.... +..+..+.+.++.++++|.|.+=-+...+.+++.+-...++.+.
T Consensus 157 siGP--------------------------------f~~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~ 204 (426)
T PRK10017 157 SVGP--------------------------------FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHG 204 (426)
T ss_pred cCCC--------------------------------cCCHHHHHHHHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEe
Confidence 3221 11122344577778899999998888888887663322455554
Q ss_pred cCCCCC-C--CCc--cC----CCCC-CCCCcEE-EEEcccCCC-CC-------h-HHHHHHHHHHHHHhcCCCCCcEEEE
Q 016535 250 YPPCDT-S--GLQ--VL----PLER-STEYPAI-ISVAQFRPE-KA-------H-PLQLEAFSVALRKLDADLPRPRLQF 309 (388)
Q Consensus 250 ~ngvd~-~--~~~--~~----~~~~-~~~~~~i-l~vgrl~~~-Kg-------~-~~ll~a~~~l~~~~~~~~~~~~l~i 309 (388)
+-++-. + ... +. .... ...+.++ +.+..+.+. |+ . ..+.+++..+.++ +.++++
T Consensus 205 aDpAF~L~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~------g~~Vv~ 278 (426)
T PRK10017 205 VDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDE------GYQVIA 278 (426)
T ss_pred cChhhhCCccccccccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHC------CCeEEE
Confidence 433210 0 000 00 0000 0112334 344444321 21 1 2334555555443 344444
Q ss_pred EeCC--C---CCccHHHHHHHHHHHHhcCCCCcEEE-ccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceE
Q 016535 310 VGSC--R---NKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383 (388)
Q Consensus 310 vG~~--~---~~~~~~~~~~l~~~~~~~~l~~~V~~-~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI 383 (388)
+-.. . ..+|.....++.+.. .-++++++ ....+..++..++++||++|..-.. +++-|+++|+|+|
T Consensus 279 lp~~~~~~~~~~dD~~~~~~l~~~~---~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-----a~I~a~~~gvP~i 350 (426)
T PRK10017 279 LSTCTGIDSYNKDDRMVALNLRQHV---SDPARYHVVMDELNDLEMGKILGACELTVGTRLH-----SAIISMNFGTPAI 350 (426)
T ss_pred EecccCccCCCCchHHHHHHHHHhc---ccccceeEecCCCChHHHHHHHhhCCEEEEecch-----HHHHHHHcCCCEE
Confidence 4432 1 122333334444433 32333433 4445567888999999998876554 6788999999998
Q ss_pred ee
Q 016535 384 GK 385 (388)
Q Consensus 384 ~~ 385 (388)
+-
T Consensus 351 ~i 352 (426)
T PRK10017 351 AI 352 (426)
T ss_pred Ee
Confidence 74
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.1e-05 Score=69.09 Aligned_cols=146 Identities=11% Similarity=0.001 Sum_probs=92.1
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCCC-------CCCCCCcEEEEEcc-cC-CCCChHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPL-------ERSTEYPAIISVAQ-FR-PEKAHPLQL 288 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~~-------~~~~~~~~il~vgr-l~-~~Kg~~~ll 288 (388)
.+..|.+++.=++..+.+.+... ..+.+.++. |...+.+... .+.+.+...+..|. -+ -.+-...++
T Consensus 134 ~~~~D~lLailPFE~~~y~k~g~---~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~ 210 (381)
T COG0763 134 AKYVDHLLAILPFEPAFYDKFGL---PCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFV 210 (381)
T ss_pred HHHhhHeeeecCCCHHHHHhcCC---CeEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHH
Confidence 35579999999999999977633 466677775 3222221110 11133455556654 22 256778889
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCC
Q 016535 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHF 368 (388)
Q Consensus 289 ~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~ 368 (388)
+|+.++++++ |+.++++--. +..+.....+..+.....-++.+. +.+-.+.+.+||+.+..|
T Consensus 211 ~a~~~l~~~~----~~~~~vlp~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~aD~al~aS----- 272 (381)
T COG0763 211 QAAQELKARY----PDLKFVLPLV-----NAKYRRIIEEALKWEVAGLSLILI----DGEKRKAFAAADAALAAS----- 272 (381)
T ss_pred HHHHHHHhhC----CCceEEEecC-----cHHHHHHHHHHhhccccCceEEec----CchHHHHHHHhhHHHHhc-----
Confidence 9999998886 8999998764 222222333332222111123322 357778999999877654
Q ss_pred ChHHHHHHHhCCceEee
Q 016535 369 GISVVEYMAAGAIPIGK 385 (388)
Q Consensus 369 ~~~vlEAma~G~PVI~~ 385 (388)
|.+.+|+|.+|+|.|.+
T Consensus 273 GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 273 GTATLEAALAGTPMVVA 289 (381)
T ss_pred cHHHHHHHHhCCCEEEE
Confidence 88999999999998875
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00011 Score=58.61 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhhHHH
Q 016535 51 ERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVY 130 (388)
Q Consensus 51 ~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (388)
+.++.+++++|.++| ++|.+++...+. ++... .+++.+..++.. ... ....+. ..
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~------~~~~~------~~~i~~~~~~~~------~k~----~~~~~~-~~ 64 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDY------EKYEI------IEGIKVIRLPSP------RKS----PLNYIK-YF 64 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCc------hhhhH------hCCeEEEEecCC------CCc----cHHHHH-HH
Confidence 457889999999999 888888875421 11111 122233333211 111 112222 23
Q ss_pred HHHHHHhhcCCcEEEecCCccc-ccc--hhhhcC-CeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 131 LSWEALCKFTPLYYFDTSGYAF-TYP--LARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 131 ~~~~~l~~~~~Div~~~~~~~~-~~~--~~~~~~-~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
...+.+.+.+||+||++...+. .+. +++..+ .|.+.+.|..++... . .
T Consensus 65 ~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~------------------------~----~ 116 (139)
T PF13477_consen 65 RLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS------------------------S----K 116 (139)
T ss_pred HHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC------------------------C----c
Confidence 4466788899999987766542 223 334566 899999986442000 0 0
Q ss_pred HHHHHHHHHHHHhccCCEEEECC
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNS 229 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S 229 (388)
..+...++++++.+++|.+++.|
T Consensus 117 ~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 117 KKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred hHHHHHHHHHHHHHhCCEEEEcC
Confidence 11134457888899999999876
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00065 Score=66.42 Aligned_cols=87 Identities=14% Similarity=-0.016 Sum_probs=56.1
Q ss_pred CcEEEEEcccCCC-----CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 269 YPAIISVAQFRPE-----KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 269 ~~~il~vgrl~~~-----Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
..+++..|..... +-...+++|++.+ +.++++..++... . .++++||.+.++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---------~~~viw~~~~~~~-------~-------~~~p~Nv~i~~w 353 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---------PYNVLWKYDGEVE-------A-------INLPANVLTQKW 353 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---------CCeEEEEECCCcC-------c-------ccCCCceEEecC
Confidence 3666777776432 2234455555544 3566665542110 0 135689999999
Q ss_pred CCHHHHHHHH--HhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 344 LLYRDLVKLL--GGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 344 v~~~~l~~~~--~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+|+.+ ++ ..++++|.- |-..++.||+.+|+|+|+-
T Consensus 354 ~Pq~~---lL~hp~v~~fItH----GG~~s~~Eal~~GvP~v~i 390 (507)
T PHA03392 354 FPQRA---VLKHKNVKAFVTQ----GGVQSTDEAIDALVPMVGL 390 (507)
T ss_pred CCHHH---HhcCCCCCEEEec----CCcccHHHHHHcCCCEEEC
Confidence 98865 45 558888864 4456899999999999974
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00063 Score=66.35 Aligned_cols=142 Identities=12% Similarity=0.023 Sum_probs=85.9
Q ss_pred ccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCC------CC-CCCCCcEEEEEcc-cC-CCCChHHHHH
Q 016535 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLP------LE-RSTEYPAIISVAQ-FR-PEKAHPLQLE 289 (388)
Q Consensus 220 ~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~------~~-~~~~~~~il~vgr-l~-~~Kg~~~ll~ 289 (388)
+..|.+++.=+...+.+++. +. +++.+.||. |.....+.. .. ..+++...+..|. -. -.+..+.+++
T Consensus 360 k~vD~ll~IfPFE~~~y~~~-gv--~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~ 436 (608)
T PRK01021 360 KYLDLLLLILPFEQNLFKDS-PL--RTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQ 436 (608)
T ss_pred HHhhhheecCccCHHHHHhc-CC--CeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHH
Confidence 44789999999999998764 43 677788876 432111110 00 1122344455553 32 2566778888
Q ss_pred HHH--HHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCC
Q 016535 290 AFS--VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367 (388)
Q Consensus 290 a~~--~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~ 367 (388)
|++ .++ ++.++++... +....+.+++..++.+. ..+.+... ++-.+++++||+.+..|
T Consensus 437 aa~~~~l~-------~~l~fvvp~a-----~~~~~~~i~~~~~~~~~-~~~~ii~~---~~~~~~m~aaD~aLaaS---- 496 (608)
T PRK01021 437 AFLASSLA-------STHQLLVSSA-----NPKYDHLILEVLQQEGC-LHSHIVPS---QFRYELMRECDCALAKC---- 496 (608)
T ss_pred HHHHHHhc-------cCeEEEEecC-----chhhHHHHHHHHhhcCC-CCeEEecC---cchHHHHHhcCeeeecC----
Confidence 887 331 3677777543 22233455665554331 12343321 12368999999988876
Q ss_pred CChHHHHHHHhCCceEee
Q 016535 368 FGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 368 ~~~~vlEAma~G~PVI~~ 385 (388)
|.+.+|++.+|+|.|..
T Consensus 497 -GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 497 -GTIVLETALNQTPTIVT 513 (608)
T ss_pred -CHHHHHHHHhCCCEEEE
Confidence 88999999999998863
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.9e-05 Score=72.04 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=74.5
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-CcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~v~ 345 (388)
++.+++++..++ .|=-+..++++.++.++. |+-+|++...... . .+.+++.+++.|++ +++.|.+..+
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v----P~S~L~L~~~~~~---~--~~~l~~~~~~~Gv~~~Ri~f~~~~~ 351 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAV----PNSRLWLLRFPAS---G--EARLRRRFAAHGVDPDRIIFSPVAP 351 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS----TTEEEEEEETSTT---H--HHHHHHHHHHTTS-GGGEEEEE---
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhC----CCcEEEEeeCCHH---H--HHHHHHHHHHcCCChhhEEEcCCCC
Confidence 444555555554 677899999999999996 8999988775421 1 25788889999995 7899999999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++-...|+.+|++|-|..+ +-+.+.+||+.+|+|||+-
T Consensus 352 ~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl 390 (468)
T PF13844_consen 352 REEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTL 390 (468)
T ss_dssp HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB-
T ss_pred HHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEec
Confidence 89999999999999998655 4489999999999999985
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00012 Score=68.00 Aligned_cols=150 Identities=15% Similarity=0.135 Sum_probs=89.3
Q ss_pred HhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCC-----Ccc-C---CC-CCCCCCcEEEEEcccCC---CCC
Q 016535 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSG-----LQV-L---PL-ERSTEYPAIISVAQFRP---EKA 283 (388)
Q Consensus 218 ~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~-----~~~-~---~~-~~~~~~~~il~vgrl~~---~Kg 283 (388)
+-+-|+.-++.++..++.+.+.+-.+.++.++.|+. |.-. ..+ . .. ....++..+++.-+... ...
T Consensus 119 i~~la~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~ 198 (346)
T PF02350_consen 119 IDKLAHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPER 198 (346)
T ss_dssp HHHH-SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--
T ss_pred hhhhhhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHH
Confidence 345599999999999999988744467888887753 3210 100 0 00 01233355555544443 244
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcC
Q 016535 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSM 363 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps 363 (388)
...+.++++.+.+. +++.+++..... ......+.+..+++ +++.+...++..+...+++.|+++|-=|
T Consensus 199 ~~~i~~~l~~L~~~-----~~~~vi~~~hn~----p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdS 266 (346)
T PF02350_consen 199 LEQILEALKALAER-----QNVPVIFPLHNN----PRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDS 266 (346)
T ss_dssp HHHHHHHHHHHHHH-----TTEEEEEE--S-----HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESS
T ss_pred HHHHHHHHHHHHhc-----CCCcEEEEecCC----chHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcC
Confidence 66788888888777 488898888642 33445666666665 3899999999999999999999876433
Q ss_pred CCCCCChHHH-HHHHhCCceEee
Q 016535 364 IDEHFGISVV-EYMAAGAIPIGK 385 (388)
Q Consensus 364 ~~E~~~~~vl-EAma~G~PVI~~ 385 (388)
| .+. ||.++|+|+|.-
T Consensus 267 -----s-GI~eEa~~lg~P~v~i 283 (346)
T PF02350_consen 267 -----S-GIQEEAPSLGKPVVNI 283 (346)
T ss_dssp -----H-HHHHHGGGGT--EEEC
T ss_pred -----c-cHHHHHHHhCCeEEEe
Confidence 4 566 999999999976
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0003 Score=57.63 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=67.8
Q ss_pred hcCCcEEEecCCcccccchhhh-cCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHH
Q 016535 138 KFTPLYYFDTSGYAFTYPLARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (388)
Q Consensus 138 ~~~~Div~~~~~~~~~~~~~~~-~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (388)
.+.||+|+.+++|..++.+... ..+|.+.|+-+-. ..+.. ....++.+. . +.-.....+..+....
T Consensus 64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y-~~~g~--------d~~FDpe~p-~---~~~~~~~~r~rN~~~l 130 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYY-RASGA--------DVGFDPEFP-P---SLDDRARLRMRNAHNL 130 (171)
T ss_pred CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEe-cCCCC--------cCCCCCCCC-C---CHHHHHHHHHHhHHHH
Confidence 3579999999998876555554 5899998875411 00000 011111111 1 1111222333344566
Q ss_pred HHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCC
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~ 258 (388)
..+..+|..++.|+|+++.+...+. .++.||+-|+|++.+
T Consensus 131 ~~l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 131 LALEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence 7778899999999999999988764 599999999998764
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0033 Score=60.46 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=78.6
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC-CCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV-DGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l-~~~V~~~g~v~ 345 (388)
++.+++.....+ .|=-+..++.+..+.++. |+-.|++.--..-. + +.++..+++.|+ +++|.|..-..
T Consensus 757 ~d~vvf~~FNqL--yKidP~~l~~W~~ILk~V----PnS~LwllrfPa~g-e----~rf~ty~~~~Gl~p~riifs~va~ 825 (966)
T KOG4626|consen 757 EDAVVFCNFNQL--YKIDPSTLQMWANILKRV----PNSVLWLLRFPAVG-E----QRFRTYAEQLGLEPDRIIFSPVAA 825 (966)
T ss_pred CCeEEEeechhh--hcCCHHHHHHHHHHHHhC----CcceeEEEeccccc-h----HHHHHHHHHhCCCccceeeccccc
Confidence 444555555554 566688899999998886 78777765432111 2 489999999999 57899988888
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.+|=..-++-+|+++-+..+.| ..+-.|.+.+|+|+|+
T Consensus 826 k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVT 863 (966)
T KOG4626|consen 826 KEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVT 863 (966)
T ss_pred hHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceee
Confidence 8888889999999998877655 3345677899999886
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.014 Score=52.67 Aligned_cols=151 Identities=19% Similarity=0.140 Sum_probs=84.2
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCC--CCceEEEcCCCCCCCCc--cCCCCC-CCCCcEEEEEcccCCCCChHHHHH
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQ--VLPLER-STEYPAIISVAQFRPEKAHPLQLE 289 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~--~~~~~vi~ngvd~~~~~--~~~~~~-~~~~~~il~vgrl~~~Kg~~~ll~ 289 (388)
++.+-+..|.+.+.-+-.-..+.+.|+. ..+-.+.|-|.--.... +.+... .++..+++.+|. -.-|-+++-.
T Consensus 161 ~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~~~pE~~~Ilvs~GG--G~dG~eLi~~ 238 (400)
T COG4671 161 VRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPHEAPEGFDILVSVGG--GADGAELIET 238 (400)
T ss_pred HHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCcCCCccceEEEecCC--ChhhHHHHHH
Confidence 3444455788888765555555555555 22233455554211011 111111 234466777764 3445454444
Q ss_pred HHHHHHHHhcCCCCCcE---EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC
Q 016535 290 AFSVALRKLDADLPRPR---LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366 (388)
Q Consensus 290 a~~~l~~~~~~~~~~~~---l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E 366 (388)
+++..... ++++ +++.|..- -....+++.+.+.+. ++|.+..+. +|+..+++.|+..|.-.-|
T Consensus 239 ~l~A~~~l-----~~l~~~~~ivtGP~M---P~~~r~~l~~~A~~~---p~i~I~~f~--~~~~~ll~gA~~vVSm~GY- 304 (400)
T COG4671 239 ALAAAQLL-----AGLNHKWLIVTGPFM---PEAQRQKLLASAPKR---PHISIFEFR--NDFESLLAGARLVVSMGGY- 304 (400)
T ss_pred HHHHhhhC-----CCCCcceEEEeCCCC---CHHHHHHHHHhcccC---CCeEEEEhh--hhHHHHHHhhheeeecccc-
Confidence 44333221 3333 55556432 223344555555543 789999986 8999999999988765433
Q ss_pred CCChHHHHHHHhCCceEe
Q 016535 367 HFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 367 ~~~~~vlEAma~G~PVI~ 384 (388)
+++.|-+++|||-+.
T Consensus 305 ---NTvCeILs~~k~aLi 319 (400)
T COG4671 305 ---NTVCEILSFGKPALI 319 (400)
T ss_pred ---hhhhHHHhCCCceEE
Confidence 367899999999753
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.011 Score=53.17 Aligned_cols=96 Identities=17% Similarity=0.138 Sum_probs=60.2
Q ss_pred EEEEcccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 272 IISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 272 il~vgrl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
++..|.-.+.|.. +...+.++.+.++ +++++++|+..+ .+ ..++..+..+-...+.+.|..+-.|+
T Consensus 125 ~i~~~~~~~~k~w~~~~~~~l~~~l~~~------~~~ivl~g~~~e---~~---~~~~i~~~~~~~~~~~~~~~~~l~e~ 192 (279)
T cd03789 125 VLPPGASGPAKRWPAERFAALADRLLAR------GARVVLTGGPAE---RE---LAEEIAAALGGPRVVNLAGKTSLREL 192 (279)
T ss_pred EECCCCCCccccCCHHHHHHHHHHHHHC------CCEEEEEechhh---HH---HHHHHHHhcCCCccccCcCCCCHHHH
Confidence 3344433444443 4666666666543 688899986432 22 33443333322234556788888999
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.++++.||++|.+.. | ++--|.+.|+|+|+
T Consensus 193 ~~li~~~~l~I~~Ds----g-~~HlA~a~~~p~i~ 222 (279)
T cd03789 193 AALLARADLVVTNDS----G-PMHLAAALGTPTVA 222 (279)
T ss_pred HHHHHhCCEEEeeCC----H-HHHHHHHcCCCEEE
Confidence 999999999998742 3 33444699999987
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.014 Score=54.56 Aligned_cols=101 Identities=9% Similarity=-0.053 Sum_probs=64.1
Q ss_pred CcEEEEEcccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.+++..|.-.+.|... ...+.++.+.++ +.+++++|+..+. +.+ ..++.++...-+..+.+.|..+-
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~------~~~vvl~ggp~e~-e~~---~~~~i~~~~~~~~~~~l~g~~sL 253 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR------GYEVVLTSGPDKD-DLA---CVNEIAQGCQTPPVTALAGKTTF 253 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHC------CCeEEEEcCCChH-HHH---HHHHHHHhcCCCccccccCCCCH
Confidence 35666767666677665 566666666432 6788888864222 122 22333332222234567898899
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.++..+++.||++|..... .+-=|.|.|+|+|+
T Consensus 254 ~el~ali~~a~l~v~nDSG-----p~HlAaA~g~P~v~ 286 (352)
T PRK10422 254 PELGALIDHAQLFIGVDSA-----PAHIAAAVNTPLIC 286 (352)
T ss_pred HHHHHHHHhCCEEEecCCH-----HHHHHHHcCCCEEE
Confidence 9999999999999976332 34446788999986
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0015 Score=52.45 Aligned_cols=79 Identities=15% Similarity=0.112 Sum_probs=45.7
Q ss_pred HhhcCCcEEEecCCcccccc--hh-hhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHH
Q 016535 136 LCKFTPLYYFDTSGYAFTYP--LA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (388)
Q Consensus 136 l~~~~~Div~~~~~~~~~~~--~~-~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (388)
.....+|+++.++.-..+-. +. .+.++|.+.|+|.-.+....-.. .. +.. .+.
T Consensus 55 ~~~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~YP~~~~-~~-----------------rd~------~~~ 110 (168)
T PF12038_consen 55 PLSHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAYPVSPG-QE-----------------RDF------QYG 110 (168)
T ss_pred ccccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccCCCCCC-cc-----------------ccc------cHH
Confidence 34456899988866333322 33 35789999999975543322110 00 000 111
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHH
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEK 238 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~ 238 (388)
+..-...-.||.|+.||++.++.+-+
T Consensus 111 ~~ni~saLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 111 MNNIYSALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHHHHHHhceeeeecchhhHHHHHH
Confidence 12223345699999999999988755
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.044 Score=48.70 Aligned_cols=252 Identities=13% Similarity=0.095 Sum_probs=134.4
Q ss_pred hhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCcee-hhhhhhhH
Q 016535 50 GERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT-MIGQSFGS 128 (388)
Q Consensus 50 ~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 128 (388)
..++..++...|+++| ++|.+-|-+. + ...+..+.+++... .+.+ .+ ..-++ .+....-.
T Consensus 12 hvhfFk~lI~elekkG--~ev~iT~rd~----~-~v~~LLd~ygf~~~------~Igk-----~g-~~tl~~Kl~~~~eR 72 (346)
T COG1817 12 HVHFFKNLIWELEKKG--HEVLITCRDF----G-VVTELLDLYGFPYK------SIGK-----HG-GVTLKEKLLESAER 72 (346)
T ss_pred hhhHHHHHHHHHHhCC--eEEEEEEeec----C-cHHHHHHHhCCCeE------eecc-----cC-CccHHHHHHHHHHH
Confidence 4467789999999999 7777766554 2 22333444454332 1111 00 00111 11112222
Q ss_pred HHHHHHHHhhcCCcEEEecCCcccccc-hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHH
Q 016535 129 VYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207 (388)
Q Consensus 129 ~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (388)
.+...+++.+.+||+.+.-++ + ..+ +++..++|.+++...++.
T Consensus 73 ~~~L~ki~~~~kpdv~i~~~s-~-~l~rvafgLg~psIi~~D~ehA---------------------------------- 116 (346)
T COG1817 73 VYKLSKIIAEFKPDVAIGKHS-P-ELPRVAFGLGIPSIIFVDNEHA---------------------------------- 116 (346)
T ss_pred HHHHHHHHhhcCCceEeecCC-c-chhhHHhhcCCceEEecCChhH----------------------------------
Confidence 233445577889998876432 2 333 666788998887765441
Q ss_pred HHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCC----CCCccCCC-----CCCC-CCcEEEEEcc
Q 016535 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDT----SGLQVLPL-----ERST-EYPAIISVAQ 277 (388)
Q Consensus 208 ~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~----~~~~~~~~-----~~~~-~~~~il~vgr 277 (388)
....+.....++.+++.+..-.+.+...+..+.++ .-+||+-. ..|.+.+. .-.. ...+++=.-.
T Consensus 117 ----~~qnkl~~Pla~~ii~P~~~~~~~~~~~G~~p~~i-~~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~ 191 (346)
T COG1817 117 ----EAQNKLTLPLADVIITPEAIDEEELLDFGADPNKI-SGYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEP 191 (346)
T ss_pred ----HHHhhcchhhhhheecccccchHHHHHhCCCccce-ecccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeecc
Confidence 00144555668999998888777777765433333 45666531 22333221 1112 2344442222
Q ss_pred -----cCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHH
Q 016535 278 -----FRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL 352 (388)
Q Consensus 278 -----l~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~ 352 (388)
...+++.+.+.++++.+.+. -.+++-. +. +.++..+.. +|++..... .|-.++
T Consensus 192 ~~A~y~~g~~~~~~~~~li~~l~k~--------giV~ipr-----~~----~~~eife~~---~n~i~pk~~--vD~l~L 249 (346)
T COG1817 192 WGAHYDNGDRGISVLPDLIKELKKY--------GIVLIPR-----EK----EQAEIFEGY---RNIIIPKKA--VDTLSL 249 (346)
T ss_pred ccceeeccccchhhHHHHHHHHHhC--------cEEEecC-----ch----hHHHHHhhh---ccccCCccc--ccHHHH
Confidence 22356666667777777443 3455543 22 223333332 334333322 344456
Q ss_pred HHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 353 LGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 353 ~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+--|++++- +-|.-.-||...|+|.|.+..|
T Consensus 250 lyya~lvig-----~ggTMarEaAlLGtpaIs~~pG 280 (346)
T COG1817 250 LYYATLVIG-----AGGTMAREAALLGTPAISCYPG 280 (346)
T ss_pred Hhhhheeec-----CCchHHHHHHHhCCceEEecCC
Confidence 666776553 2344568999999999998754
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.025 Score=52.40 Aligned_cols=98 Identities=18% Similarity=0.136 Sum_probs=66.8
Q ss_pred CcEEEEEc-ccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 269 YPAIISVA-QFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 269 ~~~il~vg-rl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
+.+++..| .-+..|+.. ...+.++.+.++ ..+++++|+.. +.+ ..++..+.++ ..+.+.|..+
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~------~~~Vvl~g~~~---e~e---~~~~i~~~~~--~~~~l~~k~s 241 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAK------GYQVVLFGGPD---EEE---RAEEIAKGLP--NAVILAGKTS 241 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHC------CCEEEEecChH---HHH---HHHHHHHhcC--CccccCCCCC
Confidence 46677778 666788776 455555556554 48999999652 222 4444444442 2233889999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
-+|+..+++.||++|.+... .+-=|.|.|+|+|+-
T Consensus 242 L~e~~~li~~a~l~I~~DSg-----~~HlAaA~~~P~I~i 276 (334)
T COG0859 242 LEELAALIAGADLVIGNDSG-----PMHLAAALGTPTIAL 276 (334)
T ss_pred HHHHHHHHhcCCEEEccCCh-----HHHHHHHcCCCEEEE
Confidence 99999999999998877432 334477889999974
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0064 Score=53.09 Aligned_cols=88 Identities=23% Similarity=0.369 Sum_probs=61.0
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
.++++.|.-+ .|| +..+.++.|..+ ++.+.+| |++.+ ..+.+++.++++ +++.++-.. ++
T Consensus 160 ~ilI~lGGsD-pk~--lt~kvl~~L~~~------~~nl~iV~gs~~p-----~l~~l~k~~~~~---~~i~~~~~~--~d 220 (318)
T COG3980 160 DILITLGGSD-PKN--LTLKVLAELEQK------NVNLHIVVGSSNP-----TLKNLRKRAEKY---PNINLYIDT--ND 220 (318)
T ss_pred eEEEEccCCC-hhh--hHHHHHHHhhcc------CeeEEEEecCCCc-----chhHHHHHHhhC---CCeeeEecc--hh
Confidence 4566777644 343 455777777555 3444444 43322 235777877776 688887765 89
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P 381 (388)
+++++..||+.+.. -|.++.||...|+|
T Consensus 221 ma~LMke~d~aI~A-----aGstlyEa~~lgvP 248 (318)
T COG3980 221 MAELMKEADLAISA-----AGSTLYEALLLGVP 248 (318)
T ss_pred HHHHHHhcchheec-----cchHHHHHHHhcCC
Confidence 99999999987754 47899999999999
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.048 Score=50.79 Aligned_cols=100 Identities=9% Similarity=-0.038 Sum_probs=61.0
Q ss_pred cEEEEEcccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
.+++..|.-.+.|... ...+.++.+.++ +.+++++|+..+. +.+..+++ .+..+-+..+.+.|..+-.
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~------~~~ivl~g~p~~~-e~~~~~~i---~~~~~~~~~~~l~g~~sL~ 252 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHAR------GYEVVLTSGPDKD-ELAMVNEI---AQGCQTPRVTSLAGKLTLP 252 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhC------CCeEEEecCCCHH-HHHHHHHH---HhhCCCCcccccCCCCCHH
Confidence 4455555544555553 455555555432 5788899854211 11222233 2222222235578988999
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
|+..+++.||++|.... . .+==|.|.|+|+|+
T Consensus 253 el~ali~~a~l~Vs~DS---G--p~HlAaA~g~p~v~ 284 (344)
T TIGR02201 253 QLAALIDHARLFIGVDS---V--PMHMAAALGTPLVA 284 (344)
T ss_pred HHHHHHHhCCEEEecCC---H--HHHHHHHcCCCEEE
Confidence 99999999999998732 2 34447889999986
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.11 Score=47.94 Aligned_cols=96 Identities=17% Similarity=0.097 Sum_probs=60.2
Q ss_pred cEEEEEcccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
..++..|.-.+.|... ...+.+..+.++ +.++++.|+++. +.+ ..++..+. . .++.+.|..+-.
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~------~~~ivl~~G~~~--e~~---~~~~i~~~--~-~~~~l~g~~sL~ 245 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPS------GLRIKLPWGAEH--EEQ---RAKRLAEG--F-PYVEVLPKLSLE 245 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHC------CCeEEEeCCCHH--HHH---HHHHHHcc--C-CcceecCCCCHH
Confidence 4444445444556655 566666666433 567777633221 222 23333332 2 357778989999
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
|+..+++.||++|..... ++-=|.|+|+|+|+
T Consensus 246 elaali~~a~l~I~nDSG-----p~HlA~A~g~p~va 277 (322)
T PRK10964 246 QVARVLAGAKAVVSVDTG-----LSHLTAALDRPNIT 277 (322)
T ss_pred HHHHHHHhCCEEEecCCc-----HHHHHHHhCCCEEE
Confidence 999999999999977432 44557889999987
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.17 Score=46.09 Aligned_cols=152 Identities=18% Similarity=0.127 Sum_probs=87.4
Q ss_pred HHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccC----CCCCCCCCcEEEEEcccC--CCCChHH
Q 016535 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PLERSTEYPAIISVAQFR--PEKAHPL 286 (388)
Q Consensus 213 ~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~----~~~~~~~~~~il~vgrl~--~~Kg~~~ 286 (388)
++.+..++.+|.+.+=.+...+.+++. +. ++.+.+-++ ..-+. .....+++.+.+++.... ..+..+.
T Consensus 119 ~~~~~~l~~~~~i~vRD~~S~~~l~~~-g~--~i~~~~D~a---~~l~~~~~~~~~~~~~~~i~i~~r~~~~~~~~~~~~ 192 (298)
T TIGR03609 119 WLVRRVLRGCRAISVRDAASYRLLKRL-GI--PAELAADPV---WLLPPEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLR 192 (298)
T ss_pred HHHHHHHccCCEEEEeCHHHHHHHHHh-CC--CceEeCChh---hhCCCCcccccccCCCCeEEEEECCCCcCCHHHHHH
Confidence 346667788999988777778877654 43 444444322 21111 111112223333443221 1223556
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC
Q 016535 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366 (388)
Q Consensus 287 ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E 366 (388)
+.+++..+.++. +.+++++.-... +|.+..+++.+. +.-++.+. ...+.+|+.+++++||++|-....
T Consensus 193 l~~~l~~l~~~~-----g~~v~~i~~~~~-~D~~~~~~l~~~---~~~~~~i~--~~~~~~e~~~~i~~~~~vI~~RlH- 260 (298)
T TIGR03609 193 LLRALDRLQRDT-----GAFVLFLPFQQP-QDLPLARALRDQ---LLGPAEVL--SPLDPEELLGLFASARLVIGMRLH- 260 (298)
T ss_pred HHHHHHHHHHhh-----CCeEEEEeCCcc-hhHHHHHHHHHh---cCCCcEEE--ecCCHHHHHHHHhhCCEEEEechH-
Confidence 777777776663 555555553221 244444444443 32223343 555678999999999988877665
Q ss_pred CCChHHHHHHHhCCceEeeC
Q 016535 367 HFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 367 ~~~~~vlEAma~G~PVI~~~ 386 (388)
..+-|+.+|+|+|+-.
T Consensus 261 ----~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 261 ----ALILAAAAGVPFVALS 276 (298)
T ss_pred ----HHHHHHHcCCCEEEee
Confidence 6788999999999753
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.14 Score=47.45 Aligned_cols=98 Identities=12% Similarity=0.045 Sum_probs=62.4
Q ss_pred CcEEEEEcc-cCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 269 YPAIISVAQ-FRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 269 ~~~il~vgr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
+.+++..|. ..+.|... ...+.++.+.++ +.+++++|+..+ .+..+++ .+..+ ...+.+.|..+
T Consensus 175 ~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~------~~~ivl~G~~~e---~~~~~~i---~~~~~-~~~~~l~g~~s 241 (334)
T TIGR02195 175 PIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ------GYQVVLFGSAKD---HPAGNEI---EALLP-GELRNLAGETS 241 (334)
T ss_pred CEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC------CCEEEEEEChhh---HHHHHHH---HHhCC-cccccCCCCCC
Confidence 355556655 34667666 666666666543 578899996532 2223333 22221 11234678888
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
-.++..+++.||++|..... .+==|.|.|+|+|+
T Consensus 242 L~el~ali~~a~l~I~~DSG-----p~HlAaA~~~P~i~ 275 (334)
T TIGR02195 242 LDEAVDLIALAKAVVTNDSG-----LMHVAAALNRPLVA 275 (334)
T ss_pred HHHHHHHHHhCCEEEeeCCH-----HHHHHHHcCCCEEE
Confidence 99999999999999976432 33446789999986
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.039 Score=52.53 Aligned_cols=88 Identities=18% Similarity=0.009 Sum_probs=59.1
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
+.+.+..|..... ..+++.+...... .+.++++...+.+. ..-++++|+...+++|..+
T Consensus 238 ~~vyvslGt~~~~---~~l~~~~~~a~~~-----l~~~vi~~~~~~~~-------------~~~~~p~n~~v~~~~p~~~ 296 (406)
T COG1819 238 PIVYVSLGTVGNA---VELLAIVLEALAD-----LDVRVIVSLGGARD-------------TLVNVPDNVIVADYVPQLE 296 (406)
T ss_pred CeEEEEcCCcccH---HHHHHHHHHHHhc-----CCcEEEEecccccc-------------ccccCCCceEEecCCCHHH
Confidence 3455555665433 4444444444343 37777777753110 1125778999999998765
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
++..||++|+. |-..++.||+.+|+|+|+
T Consensus 297 ---~l~~ad~vI~h----GG~gtt~eaL~~gvP~vv 325 (406)
T COG1819 297 ---LLPRADAVIHH----GGAGTTSEALYAGVPLVV 325 (406)
T ss_pred ---HhhhcCEEEec----CCcchHHHHHHcCCCEEE
Confidence 89999999987 445578999999999986
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0033 Score=58.16 Aligned_cols=132 Identities=14% Similarity=0.020 Sum_probs=77.4
Q ss_pred cCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccC--CCCChHHHHHHHHHHHHHh
Q 016535 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFR--PEKAHPLQLEAFSVALRKL 298 (388)
Q Consensus 221 ~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~--~~Kg~~~ll~a~~~l~~~~ 298 (388)
.+|.+.+.=+...+.+ +. +...+.||+-... ........+++.+.++.|.=. -.+.+..+++++.+++++
T Consensus 127 ~~d~vl~ifPFE~~~y----g~--~~~~VGhPl~d~~-~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~- 198 (347)
T PRK14089 127 YCDFLASILPFEVQFY----QS--KATYVGHPLLDEI-KEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGK- 198 (347)
T ss_pred HHhhhhccCCCCHHHh----CC--CCEEECCcHHHhh-hhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-
Confidence 3566666554444433 32 5557888753221 110110112234555555532 235667777888888754
Q ss_pred cCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHh
Q 016535 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAA 378 (388)
Q Consensus 299 ~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~ 378 (388)
..++++.|... . +.+++..++. ..+.+.+ +..++++.||+.+..| |.+.+|++.+
T Consensus 199 -----~~~~~i~~a~~----~---~~i~~~~~~~---~~~~~~~-----~~~~~m~~aDlal~~S-----GT~TLE~al~ 253 (347)
T PRK14089 199 -----EKILVVPSFFK----G---KDLKEIYGDI---SEFEISY-----DTHKALLEAEFAFICS-----GTATLEAALI 253 (347)
T ss_pred -----CcEEEEeCCCc----H---HHHHHHHhcC---CCcEEec-----cHHHHHHhhhHHHhcC-----cHHHHHHHHh
Confidence 36788877531 1 3555554433 2344443 4467999999888765 7788899999
Q ss_pred CCceEee
Q 016535 379 GAIPIGK 385 (388)
Q Consensus 379 G~PVI~~ 385 (388)
|+|.|..
T Consensus 254 g~P~Vv~ 260 (347)
T PRK14089 254 GTPFVLA 260 (347)
T ss_pred CCCEEEE
Confidence 9999864
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.037 Score=52.08 Aligned_cols=144 Identities=16% Similarity=0.168 Sum_probs=71.1
Q ss_pred HhccCCEEEECChhHHHHHHHHhCCCC-ceEEEcCCCCC--CCCccCCC---------CCCCCCcEEEEEcccCCCCCh-
Q 016535 218 VGSCADLAMVNSSWTQSHIEKLWGIPD-RIKRVYPPCDT--SGLQVLPL---------ERSTEYPAIISVAQFRPEKAH- 284 (388)
Q Consensus 218 ~~~~a~~ii~~S~~~~~~l~~~~~~~~-~~~vi~ngvd~--~~~~~~~~---------~~~~~~~~il~vgrl~~~Kg~- 284 (388)
.....|.+++.|+..++.+.+.++.+. ++ +..|..- ..+..... ....++..|+|+-.+......
T Consensus 131 ~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i--~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~ 208 (369)
T PF04464_consen 131 NYRNYDYFIVSSEFEKEIFKKAFGYPEDKI--LVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNE 208 (369)
T ss_dssp HHTT-SEEEESSHHHHHHHHHHTT--GGGE--EES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--G
T ss_pred hccCCcEEEECCHHHHHHHHHHhccCcceE--EEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccc
Confidence 446679999999999999998887643 44 4445421 11111111 111344588888655432221
Q ss_pred -----HH--HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCc
Q 016535 285 -----PL--QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAV 357 (388)
Q Consensus 285 -----~~--ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ad 357 (388)
.. -++.+. ...+ .++.+++-.- .......... ....++|.+...- +++.+++..||
T Consensus 209 ~~~~~~~~~~~~~l~-~~~~-----~~~~li~k~H------p~~~~~~~~~---~~~~~~i~~~~~~--~~~~~ll~~aD 271 (369)
T PF04464_consen 209 YFKFFFSDLDFEKLN-FLLK-----NNYVLIIKPH------PNMKKKFKDF---KEDNSNIIFVSDN--EDIYDLLAAAD 271 (369)
T ss_dssp GSS----TT-HHHHH-HHHT-----TTEEEEE--S------HHHHTT-------TT-TTTEEE-TT---S-HHHHHHT-S
T ss_pred cccccccccCHHHHH-HHhC-----CCcEEEEEeC------chhhhchhhh---hccCCcEEECCCC--CCHHHHHHhcC
Confidence 22 223333 2222 5888888763 2211122211 2334678876653 58999999999
Q ss_pred EEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 358 VGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 358 v~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++|- .++-+++|++.+++|||-.
T Consensus 272 iLIT-----DySSi~fD~~~l~KPiify 294 (369)
T PF04464_consen 272 ILIT-----DYSSIIFDFLLLNKPIIFY 294 (369)
T ss_dssp EEEE-----SS-THHHHHGGGT--EEEE
T ss_pred EEEE-----echhHHHHHHHhCCCEEEE
Confidence 9774 3455899999999999954
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.11 Score=47.71 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=62.9
Q ss_pred CCcEEEEEcccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 268 EYPAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
++.+++..|.-.+.|... ...+.++.+.++ +.+++++|+++. +.+ ..++..+.. + +..+.|..+
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~------~~~~vl~~g~~~--e~~---~~~~i~~~~--~-~~~l~g~~s 244 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR------GLQIVLPWGNDA--EKQ---RAERIAEAL--P-GAVVLPKMS 244 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC------CCeEEEeCCCHH--HHH---HHHHHHhhC--C-CCeecCCCC
Confidence 346667777656777774 566666666433 577888754321 112 233333332 2 346679889
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
-.++.++++.||++|..... .+==|.|.|+|+|+
T Consensus 245 L~el~ali~~a~l~I~~DSg-----p~HlAaa~g~P~i~ 278 (319)
T TIGR02193 245 LAEVAALLAGADAVVGVDTG-----LTHLAAALDKPTVT 278 (319)
T ss_pred HHHHHHHHHcCCEEEeCCCh-----HHHHHHHcCCCEEE
Confidence 99999999999999977432 33446688999986
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.4 Score=46.85 Aligned_cols=46 Identities=15% Similarity=-0.135 Sum_probs=33.2
Q ss_pred CCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 335 ~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+.++.+.+++|+.+ +++.+++-.+-+.. --.+++||+++|+|+|+.
T Consensus 344 ~~g~~v~~w~PQ~~---iL~h~~v~~fvtH~--G~nS~~Eal~~GVP~v~~ 389 (482)
T PLN03007 344 GKGLIIRGWAPQVL---ILDHQATGGFVTHC--GWNSLLEGVAAGLPMVTW 389 (482)
T ss_pred cCCEEEecCCCHHH---HhccCccceeeecC--cchHHHHHHHcCCCeeec
Confidence 35899999998754 67777753333322 234899999999999974
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.43 Score=46.37 Aligned_cols=45 Identities=16% Similarity=-0.194 Sum_probs=31.2
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+++.+.+++|+.+ ++...++..+-+. +--.+++||+++|+|+|+-
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~~v~~fvtH--gG~nS~~eal~~GvP~l~~ 367 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHSSVGGFWTH--CGWNSTLEAVFAGVPMLTF 367 (459)
T ss_pred CCEEEeccCCHHH---HhccCccceEEec--CchhHHHHHHHcCCCEEec
Confidence 4788889998776 4556665222222 2335899999999999973
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.38 Score=44.53 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=103.4
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCC------Cc-cCC-----CCCCCCCcEEEEEcccCC-CCChH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSG------LQ-VLP-----LERSTEYPAIISVAQFRP-EKAHP 285 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~------~~-~~~-----~~~~~~~~~il~vgrl~~-~Kg~~ 285 (388)
..-|+.-++.++..++++.+.+-.++++.++.|.+-... .. ... .....++..++..-|-+- .+++.
T Consensus 143 ~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~ 222 (383)
T COG0381 143 SHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVGEPLE 222 (383)
T ss_pred HHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhcccccHH
Confidence 345788899999999999876544567999998752110 00 000 112233466677766554 39999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHH-HhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC
Q 016535 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS-IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364 (388)
Q Consensus 286 ~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~-~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~ 364 (388)
.+++++.++.+++ +++.++.-=.-. . .+++.. +.++-.++|.++.++...+...+++.|.+.+-=|
T Consensus 223 ~i~~al~~i~~~~----~~~~viyp~H~~--~------~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS- 289 (383)
T COG0381 223 EICEALREIAEEY----PDVIVIYPVHPR--P------RVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS- 289 (383)
T ss_pred HHHHHHHHHHHhC----CCceEEEeCCCC--h------hhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-
Confidence 9999999999996 677776654321 1 333333 4556567899999999999999999996554322
Q ss_pred CCCCChHHHHHHHhCCceEeeC
Q 016535 365 DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 365 ~E~~~~~vlEAma~G~PVI~~~ 386 (388)
|-..=||-..|+||++-+
T Consensus 290 ----GgiqEEAp~lg~Pvl~lR 307 (383)
T COG0381 290 ----GGIQEEAPSLGKPVLVLR 307 (383)
T ss_pred ----CchhhhHHhcCCcEEeec
Confidence 445668999999998754
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0018 Score=47.54 Aligned_cols=30 Identities=17% Similarity=0.245 Sum_probs=26.9
Q ss_pred EEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 358 VGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 358 v~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.|+..+++++.++|+||||+|+|++++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~ 30 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDS 30 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECCh
Confidence 467888889999999999999999999865
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.11 Score=47.55 Aligned_cols=146 Identities=13% Similarity=0.061 Sum_probs=87.9
Q ss_pred EEECChhH-HHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCC
Q 016535 225 AMVNSSWT-QSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLP 303 (388)
Q Consensus 225 ii~~S~~~-~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~ 303 (388)
+++.++.. ++.+.+..+ ..+...++.++|.+.+.+.+.+. ....-+.++|+..|+ .++.+=+.+..-..+. ..
T Consensus 142 v~~~g~~l~~~~yyq~~~-~~~~~~~~~a~d~~~~~~i~~da-~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl---~v 215 (373)
T COG4641 142 VLSFGGGLVANKYYQEGG-ARNCYYLPWAVDDSLFHPIPPDA-SYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKL---MV 215 (373)
T ss_pred hhhccchHHHHHHHHhhc-ccceeccCccCCchhcccCCccc-cceeeeEEecCCCcc-HHHHHHHHhhccchhh---hc
Confidence 44444444 445543322 45777899999988887655333 233578999998776 2222222222222221 12
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH-HHHHHHHHhCcEEEEcCC---CCC-C--ChHHHHHH
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY-RDLVKLLGGAVVGIHSMI---DEH-F--GISVVEYM 376 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~-~~l~~~~~~adv~v~ps~---~E~-~--~~~vlEAm 376 (388)
+-++...|..- ...+... -..+++...|+.+. +.+...++..|+.+.-++ .++ + .+-+.|++
T Consensus 216 ~rr~~~~g~~y-------~~~~~~~----~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeia 284 (373)
T COG4641 216 DRRFYVLGPRY-------PDDIWGR----TWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIA 284 (373)
T ss_pred cceeeecCCcc-------chhhhcc----cccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHh
Confidence 35666777531 1122211 12357888888876 889999999998886542 233 3 67799999
Q ss_pred HhCCceEeeCC
Q 016535 377 AAGAIPIGKHF 387 (388)
Q Consensus 377 a~G~PVI~~~~ 387 (388)
+||.|-|++.+
T Consensus 285 gc~~~liT~~~ 295 (373)
T COG4641 285 GCGGFLITDYW 295 (373)
T ss_pred hcCCccccccH
Confidence 99999888754
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.72 Score=43.01 Aligned_cols=98 Identities=11% Similarity=0.028 Sum_probs=60.5
Q ss_pred cEEEEEccc-CCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC--Cc-EEEccC
Q 016535 270 PAIISVAQF-RPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--GN-VEFYKN 343 (388)
Q Consensus 270 ~~il~vgrl-~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--~~-V~~~g~ 343 (388)
.+++..|.- .+.|... ...+.++.+.+ .+++++++|+..+ .+..+++ .+..+-+ .+ +.+.|.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~------~~~~vvl~Gg~~e---~~~~~~i---~~~~~~~~~~~~~~l~g~ 249 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID------EGYQVVLFGSAKD---HEAGNEI---LAALNTEQQAWCRNLAGE 249 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH------CCCeEEEEeCHHh---HHHHHHH---HHhcccccccceeeccCC
Confidence 455566553 3666655 45565555542 3678889986432 2222333 3322211 12 556788
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.+-.++.++++.||++|..-.. .+==|.|.|+|+|+
T Consensus 250 ~sL~el~ali~~a~l~I~nDTG-----p~HlAaA~g~P~va 285 (348)
T PRK10916 250 TQLEQAVILIAACKAIVTNDSG-----LMHVAAALNRPLVA 285 (348)
T ss_pred CCHHHHHHHHHhCCEEEecCCh-----HHHHHHHhCCCEEE
Confidence 8889999999999999876332 34447788999986
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.15 Score=42.75 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=63.3
Q ss_pred ChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhhH
Q 016535 49 GGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGS 128 (388)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (388)
|--+.+..|+++|.++..++.+.+-+.+. +..+.. .+.+ .+.+.+.+++. . .
T Consensus 32 GE~~a~~~Li~~l~~~~p~~~illT~~T~--tg~~~~---~~~~----~~~v~~~~~P~------D-~------------ 83 (186)
T PF04413_consen 32 GEVNAARPLIKRLRKQRPDLRILLTTTTP--TGREMA---RKLL----PDRVDVQYLPL------D-F------------ 83 (186)
T ss_dssp HHHHHHHHHHHHHTT---TS-EEEEES-C--CHHHHH---HGG-----GGG-SEEE---------S-S------------
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEecCC--chHHHH---HHhC----CCCeEEEEeCc------c-C------------
Confidence 67778899999999986667776666543 112211 1111 11112222221 0 0
Q ss_pred HHHHHHHHhhcCCcEEEec--CCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 129 VYLSWEALCKFTPLYYFDT--SGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 129 ~~~~~~~l~~~~~Div~~~--~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
.....+.+...+||+++.. .-|+..+..++..++|++. +.... +.....
T Consensus 84 ~~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~L-vNarl----------------------------s~~s~~ 134 (186)
T PF04413_consen 84 PWAVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVL-VNARL----------------------------SERSFR 134 (186)
T ss_dssp HHHHHHHHHHH--SEEEEES----HHHHHH-----S-EEE-EEE------------------------------------
T ss_pred HHHHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEE-Eeeee----------------------------ccccch
Confidence 0112233566789966433 3344333344567788765 22100 000001
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcC
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYP 251 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~n 251 (388)
.++.+.++.+..++..|.|.+.|+..++.+.+.+..++++.+..|
T Consensus 135 ~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 135 RYRRFPFLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVTGN 179 (186)
T ss_dssp ------HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE---
T ss_pred hhhhhHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEeCc
Confidence 122234567888899999999999999999988665567877765
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0009 Score=55.28 Aligned_cols=43 Identities=21% Similarity=0.232 Sum_probs=34.5
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.+|.+.++. +++.++++.||+.|.- +-+.++.|++++|+|.|.
T Consensus 55 ~~v~~~~~~--~~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ 97 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAADLVISH----AGAGTIAEALALGKPAIV 97 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEE
T ss_pred CcEEEEech--hhHHHHHHHcCEEEeC----CCccHHHHHHHcCCCeec
Confidence 589999998 6799999999988764 445799999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.93 E-value=1 Score=39.28 Aligned_cols=106 Identities=13% Similarity=0.024 Sum_probs=61.9
Q ss_pred CCCcEEEEEcccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHh-cCCCCcEEEccC
Q 016535 267 TEYPAIISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE-LKVDGNVEFYKN 343 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~-~~l~~~V~~~g~ 343 (388)
.+.++-+.||.-.+.-.. +.+.+.+..+.+.+.+ ....+++--+-...+ .++...++ +.-. -..+...
T Consensus 160 ~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~--~g~~~lisfSRRTp~------~~~s~l~~~l~s~-~~i~w~~ 230 (329)
T COG3660 160 PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN--QGGSFLISFSRRTPD------TVKSILKNNLNSS-PGIVWNN 230 (329)
T ss_pred CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh--CCceEEEEeecCCcH------HHHHHHHhccccC-ceeEeCC
Confidence 455778888876554333 3444444444444322 346666665443322 45555554 3322 2444433
Q ss_pred C--CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 344 L--LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 344 v--~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
- +.+-..+++++||.++.+-..=+ -.-||.+.|+||-+
T Consensus 231 ~d~g~NPY~~~La~Adyii~TaDSin---M~sEAasTgkPv~~ 270 (329)
T COG3660 231 EDTGYNPYIDMLAAADYIISTADSIN---MCSEAASTGKPVFI 270 (329)
T ss_pred CCCCCCchHHHHhhcceEEEecchhh---hhHHHhccCCCeEE
Confidence 3 34577889999999998743222 35799999999975
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.17 Score=51.38 Aligned_cols=135 Identities=17% Similarity=0.122 Sum_probs=97.3
Q ss_pred CceEEEcCCCCCCCCccCCCCC------------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 244 DRIKRVYPPCDTSGLQVLPLER------------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 244 ~~~~vi~ngvd~~~~~~~~~~~------------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
..+..+|-|+|...+....... ..++..++.+-|++.-||...=+.|+.++..+++...+.+.++.+.
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 4456677788876654322111 0456789999999999999999999999999987766778888887
Q ss_pred CCCCCccHHHHHHHHHHHHh--------cCC---CCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhC
Q 016535 312 SCRNKSDEERLQSLKDKSIE--------LKV---DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379 (388)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~--------~~l---~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G 379 (388)
.+...+..+ .++++..+.. .+- ..-+.+...++..++.++|..+|+++..++.+|+.++.+|+..|.
T Consensus 319 ~~~~~~~~~-v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 319 NPKRTDGKE-VEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cCCcccchH-HHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 765443332 2233222221 111 122346688899999999999999999999999999999998874
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.15 Score=46.61 Aligned_cols=106 Identities=12% Similarity=0.010 Sum_probs=68.9
Q ss_pred CCCcEEEEEcccCCCC--ChH---HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 016535 267 TEYPAIISVAQFRPEK--AHP---LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (388)
Q Consensus 267 ~~~~~il~vgrl~~~K--g~~---~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~ 341 (388)
..+...+.+|.-...- +.+ .+++.+..+.+.. ...+.+..+-...+ +..+.|++..+. .+.+.+.
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~-----~~~~~vttSRRTp~--~~~~~L~~~~~~---~~~~~~~ 214 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAY-----GGSLLVTTSRRTPP--EAEAALRELLKD---NPGVYIW 214 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhC-----CCeEEEEcCCCCcH--HHHHHHHHhhcC---CCceEEe
Confidence 3456677888644322 222 4666666666664 58888888754432 333444444432 3567555
Q ss_pred cCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 342 g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
..-+.+-+.++|+.||.++.+...-+ =+.||.+.|+||..-
T Consensus 215 ~~~~~nPy~~~La~ad~i~VT~DSvS---MvsEA~~tG~pV~v~ 255 (311)
T PF06258_consen 215 DGTGENPYLGFLAAADAIVVTEDSVS---MVSEAAATGKPVYVL 255 (311)
T ss_pred cCCCCCcHHHHHHhCCEEEEcCccHH---HHHHHHHcCCCEEEe
Confidence 66667779999999999998854322 267999999999764
|
The function of this family is unknown. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.6 Score=47.02 Aligned_cols=118 Identities=15% Similarity=0.132 Sum_probs=73.7
Q ss_pred CCCcEEEEEcccCCCCChHH-H---HHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHh--------cCC
Q 016535 267 TEYPAIISVAQFRPEKAHPL-Q---LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE--------LKV 334 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~-l---l~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~--------~~l 334 (388)
++....+++-|+..+|+..+ + ++-+.++++.......++++++.|...+... .-+++.+++.+ -.+
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-TTT
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcChhh
Confidence 44567789999999999988 3 3455556554221224588999998654422 12233333322 223
Q ss_pred CC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 335 DG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 335 ~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+ +|.|+...+-+--..++.++|+-+..|. .|..|.+-+=+|..|.+.+++-
T Consensus 520 ~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstl 575 (713)
T PF00343_consen 520 GDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTL 575 (713)
T ss_dssp CCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEES
T ss_pred ccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecc
Confidence 34 6999999988888889999999998874 7999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=94.97 E-value=3.2 Score=38.79 Aligned_cols=159 Identities=13% Similarity=0.091 Sum_probs=85.2
Q ss_pred HHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccC---CCC----CCCCCcEEEEEcccCCC
Q 016535 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL---PLE----RSTEYPAIISVAQFRPE 281 (388)
Q Consensus 209 ~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~---~~~----~~~~~~~il~vgrl~~~ 281 (388)
...+|+.....+.+..+++=.+...+.++ ..+. +..... |+.+.-+. +.. ....+...+.+..+.+.
T Consensus 140 ~~s~~~~~~~~~~~s~i~vRD~~S~~llk-~~gi--~a~l~~---D~Af~L~~~~~~~~~~~~~~~~~~~~i~lr~~~~~ 213 (385)
T COG2327 140 PLSRQLLNYVLGGCSAISVRDPVSYELLK-QLGI--NARLVT---DPAFLLPASSQNATASDVEAREKTVAITLRGLHPD 213 (385)
T ss_pred HHHHHHHHHHhcCCcEEEEecHHhHHHHH-HcCC--CeEeec---CcceecccccccccccccccccceEEEEecccCCc
Confidence 34455677778888888888888888887 4454 222222 43222110 111 11223444555555554
Q ss_pred CChHH-----HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC
Q 016535 282 KAHPL-----QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA 356 (388)
Q Consensus 282 Kg~~~-----ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a 356 (388)
+..+. .-+++..+.... ....++...-.+. .+|... .++.++...-.+++.+......+++-..+.++
T Consensus 214 ~t~~~~~~~~v~~~l~~~~~~~---~~~~~i~~~~~~~-s~d~~v---a~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~ 286 (385)
T COG2327 214 NTAQRSILKYVNEALDLVERQV---KALWRITLIDYGA-SDDLAV---ADAIAQLVLDSAEILVSSDEYAEELGGILAAC 286 (385)
T ss_pred hhhhHHHHHHHHHHHHHHHHhh---hcceEEEeeeccc-cchhHH---HHHHHhhcCCccceEeecchHHHHHHHHhccC
Confidence 33333 234444332221 1234444333322 223333 33333333333677776443357778899999
Q ss_pred cEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 357 VVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 357 dv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|+.|-.-.. +++=||+.|+|+|+-
T Consensus 287 dl~Vg~R~H-----saI~al~~g~p~i~i 310 (385)
T COG2327 287 DLIVGMRLH-----SAIMALAFGVPAIAI 310 (385)
T ss_pred ceEEeehhH-----HHHHHHhcCCCeEEE
Confidence 988876554 678899999999974
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.076 Score=39.31 Aligned_cols=74 Identities=14% Similarity=-0.096 Sum_probs=52.0
Q ss_pred EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc---cCCCHHH--HHHHHHhCcEEEEcCCC---CCCChHHHHHHHh
Q 016535 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY---KNLLYRD--LVKLLGGAVVGIHSMID---EHFGISVVEYMAA 378 (388)
Q Consensus 307 l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~---g~v~~~~--l~~~~~~adv~v~ps~~---E~~~~~vlEAma~ 378 (388)
++++|+ .......+++.++++|.. ..++ +.....+ +++.++.||++|+++.+ +.+-.+--+|-..
T Consensus 2 vliVGG-----~~~~~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~ 74 (97)
T PF10087_consen 2 VLIVGG-----REDRERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKY 74 (97)
T ss_pred EEEEcC-----CcccHHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHc
Confidence 567786 233445889999998875 4444 4444444 99999999988887643 2344455788889
Q ss_pred CCceEeeCC
Q 016535 379 GAIPIGKHF 387 (388)
Q Consensus 379 G~PVI~~~~ 387 (388)
|+|++.+++
T Consensus 75 ~ip~~~~~~ 83 (97)
T PF10087_consen 75 GIPIIYSRS 83 (97)
T ss_pred CCcEEEECC
Confidence 999998873
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.71 Score=38.08 Aligned_cols=110 Identities=15% Similarity=0.180 Sum_probs=54.5
Q ss_pred CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCCCceehhhhhhh
Q 016535 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (388)
||--.-+..+++.+.....+++..+++.....+.. ...+.++..... ..+...++...+.. +.++.....+.
T Consensus 8 GGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~-k~~~~~~~~~~~----~~~~~~~r~r~v~q---~~~~~~~~~l~ 79 (170)
T PF08660_consen 8 GGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRS-KAEQLEKSSSKR----HKILEIPRAREVGQ---SYLTSIFTTLR 79 (170)
T ss_pred cHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHH-HHHHHHHhcccc----ceeeccceEEEech---hhHhhHHHHHH
Confidence 36555566777888444445666666655322211 112222211110 01111111111111 12233445556
Q ss_pred HHHHHHHHHhhcCCcEEEecCCcccccc---hhhhc------CCeEEE
Q 016535 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIF------GCRVIC 166 (388)
Q Consensus 128 ~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~------~~~~i~ 166 (388)
.....+..+.+.+||+|+++.. ..++| ++++. ++++|+
T Consensus 80 ~~~~~~~il~r~rPdvii~nGp-g~~vp~~~~~~l~~~~~~~~~kiIy 126 (170)
T PF08660_consen 80 AFLQSLRILRRERPDVIISNGP-GTCVPVCLAAKLLRLLGLRGSKIIY 126 (170)
T ss_pred HHHHHHHHHHHhCCCEEEEcCC-ceeeHHHHHHHHHHHhhccCCcEEE
Confidence 6667777788889999998865 33455 44555 777664
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.41 Score=48.89 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=84.9
Q ss_pred CCCcEEEEEcccCCCCChHH-HHHH---HHHHHHHhcCCCCCcEEEEEeCCCCCccH--HHHHHHHHHHH----hcCCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPL-QLEA---FSVALRKLDADLPRPRLQFVGSCRNKSDE--ERLQSLKDKSI----ELKVDG 336 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~-ll~a---~~~l~~~~~~~~~~~~l~ivG~~~~~~~~--~~~~~l~~~~~----~~~l~~ 336 (388)
++...++++-|+..+|+..+ ++.. +.++++.......+.++++.|...+.... +..+.+-+.++ +-.+.+
T Consensus 541 p~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 541 PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred cccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcC
Confidence 44577889999999999999 6555 44454432111235888888887554322 23333333343 223334
Q ss_pred --cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 337 --NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 337 --~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+|.|+...+-+--..++.+||+-...|. .|..|.+-+-+|..|.+.+++-
T Consensus 621 ~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtl 674 (815)
T PRK14986 621 KLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTL 674 (815)
T ss_pred ceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeecc
Confidence 6999999887788889999999998775 7999999999999999999874
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.23 Score=50.52 Aligned_cols=118 Identities=16% Similarity=0.133 Sum_probs=84.4
Q ss_pred CCCcEEEEEcccCCCCChHH-HHHH---HHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcC--------C
Q 016535 267 TEYPAIISVAQFRPEKAHPL-QLEA---FSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--------V 334 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~-ll~a---~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~--------l 334 (388)
++....+++-|+..+|++.+ ++.. +.++++.......+.++++.|...+... ..+++.+++.+.. +
T Consensus 525 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp~v 602 (794)
T TIGR02093 525 PNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDPAV 602 (794)
T ss_pred ccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccChhh
Confidence 44566788999999999999 5554 4455443111123568888888755432 2334444444333 4
Q ss_pred CC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 335 DG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 335 ~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+ +|.|+....-+--..++.+||+-..-|. .|..|.+-+-+|..|.+.+++-
T Consensus 603 ~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtl 658 (794)
T TIGR02093 603 GDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTL 658 (794)
T ss_pred CCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecc
Confidence 44 6999999888888889999999998775 7999999999999999999873
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.51 Score=41.46 Aligned_cols=102 Identities=16% Similarity=0.104 Sum_probs=57.6
Q ss_pred CCCcEEEEEcccCCCCChHH--HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 267 TEYPAIISVAQFRPEKAHPL--QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~--ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
.++.+++..|.-.+.|.... ..+.+..+.++ ...++++|+.. .+..+...+..+...- ..+.+.|..
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~------~~~vvl~g~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~ 172 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKER------GYRVVLLGGPE----EQEKEIADQIAAGLQN-PVINLAGKT 172 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCC------T-EEEE--SSH----HHHHHHHHHHHTTHTT-TTEEETTTS
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhh------CceEEEEccch----HHHHHHHHHHHHhccc-ceEeecCCC
Confidence 34466777777677777655 44444444322 37888888642 1122233343333321 268888999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
+-.|+..+++.||++|.+-.. .+-=|.|.|+|+|+
T Consensus 173 ~l~e~~ali~~a~~~I~~Dtg-----~~HlA~a~~~p~v~ 207 (247)
T PF01075_consen 173 SLRELAALISRADLVIGNDTG-----PMHLAAALGTPTVA 207 (247)
T ss_dssp -HHHHHHHHHTSSEEEEESSH-----HHHHHHHTT--EEE
T ss_pred CHHHHHHHHhcCCEEEecCCh-----HHHHHHHHhCCEEE
Confidence 999999999999999987432 44557889999987
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.49 Score=47.76 Aligned_cols=119 Identities=19% Similarity=0.119 Sum_probs=86.6
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhc-CCCCCcEEEEEeCCCCCccH--HHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLD-ADLPRPRLQFVGSCRNKSDE--ERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~-~~~~~~~l~ivG~~~~~~~~--~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
+...++++-|+..+|++.+.+-=...+..... +.-|++.+++.|...+.... +....+-..++..+...+|.|+...
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nY 565 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNY 565 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCC
Confidence 46788999999999999987755555544443 22366777888876444221 2333444444444334579999998
Q ss_pred CHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 345 LYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+-+--..++.+||+-...|. .|..|.+-+-+|..|.+.|+|-
T Consensus 566 dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtl 609 (750)
T COG0058 566 DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTL 609 (750)
T ss_pred ChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeecc
Confidence 87777779999999998764 7999999999999999999874
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=93.86 E-value=4.3 Score=35.77 Aligned_cols=159 Identities=19% Similarity=0.144 Sum_probs=85.2
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCcc-CCCCCCCC--CcEEEEEccc---CCCCChHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-LPLERSTE--YPAIISVAQF---RPEKAHPLQ 287 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~-~~~~~~~~--~~~il~vgrl---~~~Kg~~~l 287 (388)
..+..++.++.+.+=.+...+.+.+. +.+.++.+.+-++ +... ........ ......+... ....-.+..
T Consensus 120 ~~~~~l~~~~~i~vRD~~S~~~l~~~-g~~~~~~~~~D~a---f~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (286)
T PF04230_consen 120 LLRRILSKADYISVRDEYSYELLKKL-GISGNVKLVPDPA---FLLPPSYPDEDKSKPKRNYISVSNSPSRNNEEYIEEI 195 (286)
T ss_pred HHHHHHhCCCEEEECCHHHHHHHHHc-CCCCCcEEEeCch---hhcCcccccccccccccceeeeccccchhhhhHHHHH
Confidence 45566677899888777777755543 4322555565443 2111 11010000 1122222221 123334455
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCC
Q 016535 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367 (388)
Q Consensus 288 l~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~ 367 (388)
.+.+..+.++. ..+.+.........++.......... ..............+.+++.++++++|++|.....
T Consensus 196 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH-- 267 (286)
T PF04230_consen 196 AELIQRLLDKG----YKIVLLPFSPSDDDEDDDDFNEIDIK--AEKFFNVIIIDYSLSPDELLELISQADLVISMRLH-- 267 (286)
T ss_pred HHHHHHhhccc----ceeEEEEeeeccchhhHHHHHhhhhh--cccccceeEecCCCCHHHHHHHHhcCCEEEecCCH--
Confidence 56666665532 34555555544322221111111110 11222344556677789999999999999988776
Q ss_pred CChHHHHHHHhCCceEeeCC
Q 016535 368 FGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 368 ~~~~vlEAma~G~PVI~~~~ 387 (388)
..+=|+++|+|+|+-+.
T Consensus 268 ---~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 268 ---GAILALSLGVPVIAISY 284 (286)
T ss_pred ---HHHHHHHcCCCEEEEec
Confidence 67889999999998654
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.66 Score=47.46 Aligned_cols=120 Identities=18% Similarity=0.163 Sum_probs=83.9
Q ss_pred CCCcEEEEEcccCCCCChHH-HHHH---HHHHHHHhcCCCCCcEEEEEeCCCCCccH--HHHHHHHHHHH----hcCCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPL-QLEA---FSVALRKLDADLPRPRLQFVGSCRNKSDE--ERLQSLKDKSI----ELKVDG 336 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~-ll~a---~~~l~~~~~~~~~~~~l~ivG~~~~~~~~--~~~~~l~~~~~----~~~l~~ 336 (388)
++....+++-|+..+|++.+ ++.. +.++++.......+.++++.|...+.... +..+.+-+.++ +-.+.+
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 45677889999999999999 5544 55554442111234788888876554322 12222333333 112334
Q ss_pred --cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 337 --NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 337 --~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+|.|+....-+--..++.+||+-..-|. .|..|.+-+-+|..|.+.++|-
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtl 661 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTL 661 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecc
Confidence 6999998888888889999999998775 7999999999999999999873
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.88 Score=40.69 Aligned_cols=86 Identities=15% Similarity=0.094 Sum_probs=52.7
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc-CCCCcEEEc-cCCCHHHHHHHHHhCcEEE
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-KVDGNVEFY-KNLLYRDLVKLLGGAVVGI 360 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~l~~~V~~~-g~v~~~~l~~~~~~adv~v 360 (388)
....+++.+..+.+.. |+.++++==-..+.... .. +..++. .. +++.+. .. -++.+++..||.++
T Consensus 138 ~~~~~~~~l~~~~~~~----p~~~lvvK~HP~~~~~~----~~-~~~~~~~~~-~~~~~~~~~---~~~~~Ll~~s~~Vv 204 (269)
T PF05159_consen 138 SQADFLDMLESFAKEN----PDAKLVVKPHPDERGGN----KY-SYLEELPNL-PNVVIIDDD---VNLYELLEQSDAVV 204 (269)
T ss_pred cHhHHHHHHHHHHHHC----CCCEEEEEECchhhCCC----Ch-hHhhhhhcC-CCeEEECCC---CCHHHHHHhCCEEE
Confidence 5566777777777775 78888765432111000 00 112221 22 344444 33 47778999999777
Q ss_pred EcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 361 HSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 361 ~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.-+ +.+-+||+.+|+||++-.
T Consensus 205 tin-----StvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 205 TIN-----STVGLEALLHGKPVIVFG 225 (269)
T ss_pred EEC-----CHHHHHHHHcCCceEEec
Confidence 543 448899999999999854
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.62 Score=44.60 Aligned_cols=116 Identities=17% Similarity=0.146 Sum_probs=50.2
Q ss_pred CChhhHHHHHHHHHhhc--------CC--CceEEEEecCC-CCCchhHHHHhhhhhc-eecCCCCeeEEecc-------c
Q 016535 48 GGGERVLWCAVKAIQEE--------SP--DLDCIVYTGDH-DAFPDSLLARAVDRFG-VELLHPPKVVHLYR-------R 108 (388)
Q Consensus 48 GG~~~~~~~l~~~L~~~--------g~--~~~v~v~~~~~-~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~-------~ 108 (388)
||.-.++.+++++|.+. |. ..+|.++|.-- +.... ++.+... +.-.++..+++++- +
T Consensus 296 GGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t----~~~q~le~~~gt~~a~IlRvPF~~~~gi~~ 371 (550)
T PF00862_consen 296 GGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGT----TCNQRLEKVSGTENARILRVPFGPEKGILR 371 (550)
T ss_dssp SHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCG----GGTSSEEEETTESSEEEEEE-ESESTEEE-
T ss_pred CCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCC----CccccccccCCCCCcEEEEecCCCCcchhh
Confidence 78889999999999764 32 23566766532 11111 1111110 10112233444332 2
Q ss_pred ccccc-CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEec
Q 016535 109 KWIEE-STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHY 170 (388)
Q Consensus 109 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~ 170 (388)
.|+.+ ..||++.-+..-. ......-.+.+||+||.+.+...... ++...++|....-|.
T Consensus 372 kwisrf~lWPyLe~fa~d~---~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHs 433 (550)
T PF00862_consen 372 KWISRFDLWPYLEEFADDA---EREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHS 433 (550)
T ss_dssp S---GGG-GGGHHHHHHHH---HHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred hccchhhchhhHHHHHHHH---HHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehhhhc
Confidence 34433 3555543322111 01111112458999987755333222 666889999988885
|
4.1.13 from EC in the following reaction: |
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.68 Score=45.01 Aligned_cols=83 Identities=18% Similarity=0.021 Sum_probs=60.6
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcE
Q 016535 279 RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 279 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv 358 (388)
..+||-+..++++.+. -.++-.+.+... ....+++-|.-+|.++.+|+.++++.+.+
T Consensus 288 ~~w~~k~~~l~~l~~~--------~eih~tV~~~~~---------------~~~~~P~~V~NHG~l~~~ef~~lL~~akv 344 (559)
T PF15024_consen 288 YMWKGKEKYLDVLHKY--------MEIHGTVYDEPQ---------------RPPNVPSFVKNHGILSGDEFQQLLRKAKV 344 (559)
T ss_pred hhhcCcHHHHHHHHhh--------cEEEEEeccCCC---------------CCcccchhhhhcCcCCHHHHHHHHHhhhE
Confidence 3467888888877654 356666654321 11235566888999999999999999999
Q ss_pred EEEc-CCCCCCChHHHHHHHhCCceEeeC
Q 016535 359 GIHS-MIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 359 ~v~p-s~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+|-. .-+| |-+.+||+|.|+|.|-+.
T Consensus 345 fiGlGfP~E--gPaPlEAia~G~vFlNp~ 371 (559)
T PF15024_consen 345 FIGLGFPYE--GPAPLEAIANGCVFLNPR 371 (559)
T ss_pred eeecCCCCC--CCChHHHHHcCCcccccc
Confidence 9954 3566 568999999999988654
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.95 Score=46.18 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=82.2
Q ss_pred CCCcEEEEEcccCCCCChHH-HHHHHH---HHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc--------CC
Q 016535 267 TEYPAIISVAQFRPEKAHPL-QLEAFS---VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL--------KV 334 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~-ll~a~~---~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~--------~l 334 (388)
++....+++-|+..+|++.+ ++..+. ++++.......+.++++.|...+.... .+.+.+++.+. .+
T Consensus 527 p~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~--aK~iIklI~~va~~in~Dp~v 604 (798)
T PRK14985 527 PQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL--AKNIIFAINKVAEVINNDPLV 604 (798)
T ss_pred chhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH--HHHHHHHHHHHHHHhcCChhh
Confidence 34466788899999999999 665544 444331111134888888887554322 22333333322 22
Q ss_pred CC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHHHHhCCceEeeC
Q 016535 335 DG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 335 ~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+ +|.|+....-+--..++.+||+-...|. .|..|.+-+-+|..|.+.+++-
T Consensus 605 ~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtl 660 (798)
T PRK14985 605 GDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL 660 (798)
T ss_pred CCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecc
Confidence 33 6999999888888889999999998775 7999999999999999999763
|
|
| >COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.52 E-value=12 Score=33.89 Aligned_cols=157 Identities=14% Similarity=0.078 Sum_probs=93.1
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCC-CCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD-TSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd-~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
..+.....|.++..+.-.++.+..... .+-+++.++. .....-.+.-+ .....+.-++.+. -++.-++.+..
T Consensus 82 rql~~~~~dviv~i~tp~Aq~~~s~~~---~iPVV~aavtd~v~a~Lv~~~~-~pg~NvTGvsD~~---~v~q~i~lik~ 154 (322)
T COG2984 82 RQLVGDKPDVIVAIATPAAQALVSATK---TIPVVFAAVTDPVGAKLVKSLE-QPGGNVTGVSDLL---PVAQQIELIKA 154 (322)
T ss_pred HHhhcCCCcEEEecCCHHHHHHHHhcC---CCCEEEEccCchhhccCCcccc-CCCCceeecCCcc---hHHHHHHHHHH
Confidence 344456678999998888888876532 2335665553 32221111111 1113344444433 24444555554
Q ss_pred HHHHhcCCCCCcEEE-EEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHH----HHHhCcEEEEcCCC---
Q 016535 294 ALRKLDADLPRPRLQ-FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK----LLGGAVVGIHSMID--- 365 (388)
Q Consensus 294 l~~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~----~~~~adv~v~ps~~--- 365 (388)
+ .|+++=+ +.-...+..+....+++++.+++.|++ |.-.+-.+-.|++. +....|++..|..+
T Consensus 155 ~-------~Pnak~Igv~Y~p~E~ns~~l~eelk~~A~~~Gl~--vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~i~ 225 (322)
T COG2984 155 L-------LPNAKSIGVLYNPGEANSVSLVEELKKEARKAGLE--VVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNLIV 225 (322)
T ss_pred h-------CCCCeeEEEEeCCCCcccHHHHHHHHHHHHHCCCE--EEEEecCcccccHHHHHHhcCCCcEEEEecchHHH
Confidence 4 3777655 333333334567889999999999987 44443333344444 44667888877532
Q ss_pred CCCChHHHHHHHhCCceEeeCC
Q 016535 366 EHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 366 E~~~~~vlEAma~G~PVI~~~~ 387 (388)
-++...+.+|...+.|++++|+
T Consensus 226 s~~~~l~~~a~~~kiPli~sd~ 247 (322)
T COG2984 226 SAIESLLQVANKAKIPLIASDT 247 (322)
T ss_pred HHHHHHHHHHHHhCCCeecCCH
Confidence 3455668899999999999986
|
|
| >PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems | Back alignment and domain information |
|---|
Probab=88.34 E-value=5.7 Score=35.98 Aligned_cols=157 Identities=15% Similarity=0.078 Sum_probs=77.5
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
.+......|.|++........+.+..... +-++..|+ |+....-.......+ ..+.-+. ...-+...++.+.+
T Consensus 53 ~~l~~~~~DlIi~~gt~aa~~~~~~~~~~--iPVVf~~V~dp~~~~l~~~~~~~~-~nvTGv~---~~~~~~~~l~l~~~ 126 (294)
T PF04392_consen 53 RKLKAQKPDLIIAIGTPAAQALAKHLKDD--IPVVFCGVSDPVGAGLVDSLDRPG-KNVTGVS---ERPPIEKQLELIKK 126 (294)
T ss_dssp HHHCCTS-SEEEEESHHHHHHHHHH-SS---S-EEEECES-TTTTTS-S-SSS---SSEEEEE---E---HHHHHHHHHH
T ss_pred HHHhcCCCCEEEEeCcHHHHHHHHhcCCC--cEEEEEeccChhhhhccccccCCC-CCEEEEE---CCcCHHHHHHHHHH
Confidence 34455688999999877777777664421 55677777 332211111111111 2344333 33455556666666
Q ss_pred HHHHhcCCCCCc-EEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHH----hCcEEEEcCC---C
Q 016535 294 ALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG----GAVVGIHSMI---D 365 (388)
Q Consensus 294 l~~~~~~~~~~~-~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~----~adv~v~ps~---~ 365 (388)
+ .|++ ++.++-+..+.......+.+++.++++|++ +....--+.+|+.+.+. ..|+++.+.. .
T Consensus 127 l-------~P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~~~ 197 (294)
T PF04392_consen 127 L-------FPDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEKVDALYLLPDNLVD 197 (294)
T ss_dssp H-------STT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HHHH
T ss_pred h-------CCCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhccCCEEEEECCcchH
Confidence 5 2543 332334322222345678888889998875 33333233455555444 5677776642 2
Q ss_pred CCCChHHHHHHHhCCceEeeC
Q 016535 366 EHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 366 E~~~~~vlEAma~G~PVI~~~ 386 (388)
+.+...+..+..+++||++.+
T Consensus 198 ~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 198 SNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HTHHHHHHHCCCTT--EEESS
T ss_pred hHHHHHHHHHHhcCCCEEECC
Confidence 334445567778999999875
|
ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A. |
| >KOG3339 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.66 E-value=12 Score=30.92 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=55.4
Q ss_pred HHHHHHHHHH-HHHhhcccCccc----eEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHh
Q 016535 14 AVLASILILA-SHVHNARRNRTT----SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARA 88 (388)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~~~~~~----~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~ 88 (388)
.|.+.+.+++ .|.+|...+.++ +++.+ ++.| |---=+.+|.++|++.- +.+-.+...+. +....+.
T Consensus 13 ~~~~li~~~v~~~~~~~~k~~Pk~~s~~~lVv---lGSG-GHT~EMlrLl~~l~~~y-~~r~yI~a~tD----~mS~~k~ 83 (211)
T KOG3339|consen 13 YVIVLIALLVFRHTQRSTKKDPKDKSLSTLVV---LGSG-GHTGEMLRLLEALQDLY-SPRSYIAADTD----EMSEQKA 83 (211)
T ss_pred HHHHHHHHHHHHHHHhccCCCCcCCcceEEEE---EcCC-CcHHHHHHHHHHHHhhc-CceEEEEecCc----hhhHHHH
Confidence 3344444444 566777755444 55544 3444 43334456778886654 23444433321 1111111
Q ss_pred hhhhceecCC-CCeeEEeccccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCC
Q 016535 89 VDRFGVELLH-PPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG 149 (388)
Q Consensus 89 ~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~ 149 (388)
. .+.....+ ..+.+.+++.+-+.. ..++-....+.+...++.++.+.+||++.++.+
T Consensus 84 ~-~F~~~~a~~~a~~~~ipRsReVgQ---S~ltSv~Tti~all~s~~lv~RirPdlil~NGP 141 (211)
T KOG3339|consen 84 R-SFELSLAHCKAKNYEIPRSREVGQ---SWLTSVFTTIWALLQSFVLVWRIRPDLILCNGP 141 (211)
T ss_pred H-hhhccccccchhheecchhhhhhh---hhhhhHHHHHHHHHHHheEEEecCCCEEEECCC
Confidence 1 12222211 112222222111110 112333444555555555667788999887763
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=87.53 E-value=1.3 Score=43.56 Aligned_cols=91 Identities=20% Similarity=0.120 Sum_probs=47.8
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
..+++..|.... .-.+..++++....++. |+ ++++.-.+.... .+++|+....++|+.+
T Consensus 277 ~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~~~---------------~l~~n~~~~~W~PQ~~ 335 (500)
T PF00201_consen 277 GVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEPPE---------------NLPKNVLIVKWLPQND 335 (500)
T ss_dssp EEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSHGC---------------HHHTTEEEESS--HHH
T ss_pred CEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccccc---------------cccceEEEeccccchh
Confidence 456667787653 23344344444444442 55 666665431111 1236899999999866
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+ ++...+-++-+. |--.++.||+.+|+|+|+-
T Consensus 336 l---L~hp~v~~fitH--gG~~s~~Ea~~~gvP~l~~ 367 (500)
T PF00201_consen 336 L---LAHPRVKLFITH--GGLNSTQEALYHGVPMLGI 367 (500)
T ss_dssp H---HTSTTEEEEEES----HHHHHHHHHCT--EEE-
T ss_pred h---hhcccceeeeec--cccchhhhhhhccCCccCC
Confidence 4 555444333222 3346799999999999973
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=87.44 E-value=2.4 Score=34.84 Aligned_cols=33 Identities=21% Similarity=0.106 Sum_probs=25.0
Q ss_pred ccCCEEEECChhHHHHHHHHhCCCCceEEEcCC
Q 016535 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP 252 (388)
Q Consensus 220 ~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ng 252 (388)
..+|..++.|+.+++.+.+.+-.++++.+..-|
T Consensus 136 ~~~D~y~Vase~~~~~l~~~Gi~~~~I~vtGiP 168 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIERGIPPERIHVTGIP 168 (169)
T ss_pred CCCCEEEECCHHHHHHHHHcCCChhHEEEeCcc
Confidence 558999999999999998864335677665444
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=85.80 E-value=37 Score=33.22 Aligned_cols=45 Identities=16% Similarity=-0.052 Sum_probs=32.1
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++.+.+++|+.+ +++...+..+-+. +--.+++||+.+|+|+|+-
T Consensus 338 rg~vv~~W~PQ~~---iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~ 382 (481)
T PLN02992 338 RGFVVPSWAPQAE---ILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAW 382 (481)
T ss_pred CCEEEeecCCHHH---HhCCcccCeeEec--CchhHHHHHHHcCCCEEec
Confidence 4688899998766 5666665333322 2335899999999999974
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=85.06 E-value=5.9 Score=38.70 Aligned_cols=43 Identities=14% Similarity=-0.101 Sum_probs=31.2
Q ss_pred CcEEEccCCCHHHHHHHHHh--CcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 336 GNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~--adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++.+.+++|+.+ ++.. +++||.- +--.+++||+++|+|+|+-
T Consensus 343 ~g~~v~~w~PQ~~---vL~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~ 387 (477)
T PLN02863 343 RGLVIRGWAPQVA---ILSHRAVGAFLTH----CGWNSVLEGLVAGVPMLAW 387 (477)
T ss_pred CCEEecCCCCHHH---HhcCCCcCeEEec----CCchHHHHHHHcCCCEEeC
Confidence 5788899998755 5665 4555543 2234899999999999973
|
|
| >PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls | Back alignment and domain information |
|---|
Probab=84.04 E-value=0.95 Score=35.50 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCc
Q 016535 8 IWAVITAVLASILILASHVHNARRNR 33 (388)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (388)
+|++|+++++++|++.....|+|+++
T Consensus 4 l~~iii~~i~l~~~~~~~~~rRR~r~ 29 (130)
T PF12273_consen 4 LFAIIIVAILLFLFLFYCHNRRRRRR 29 (130)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 44444444444444444443444333
|
Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=83.57 E-value=5.4 Score=38.60 Aligned_cols=45 Identities=16% Similarity=-0.062 Sum_probs=34.2
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++.+.+++|+.+ +++.+++..+-+.. --.+++||+++|+|+|+.
T Consensus 334 ~g~~v~~W~PQ~~---iL~H~~v~~FvTH~--G~nS~lEal~~GVP~v~~ 378 (451)
T PLN03004 334 KGMVVKSWAPQVP---VLNHKAVGGFVTHC--GWNSILEAVCAGVPMVAW 378 (451)
T ss_pred CcEEEEeeCCHHH---HhCCCccceEeccC--cchHHHHHHHcCCCEEec
Confidence 5789999998876 67888874443332 234899999999999974
|
|
| >PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.18 E-value=32 Score=30.66 Aligned_cols=105 Identities=14% Similarity=-0.008 Sum_probs=67.5
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCC--------CCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC--------RNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~--------~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
++.++....-.+.+.+++.++.+++. ..+++..|.. ...-..+....+++..++.|++--.++...
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~------g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d~ 101 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKEL------GVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMDT 101 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHc------CCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCCh
Confidence 44444445556788899999999875 5667777732 111134567789999999999844444443
Q ss_pred CCHHHHHHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+++..+...+|++-.+|. .+.++ -+-++-..|+||+-++
T Consensus 102 ---~~~~~l~~~vd~~kIga~~~~n~~-LL~~~a~~gkPV~lk~ 141 (266)
T PRK13398 102 ---RDVEEVADYADMLQIGSRNMQNFE-LLKEVGKTKKPILLKR 141 (266)
T ss_pred ---hhHHHHHHhCCEEEECcccccCHH-HHHHHhcCCCcEEEeC
Confidence 444444455898888874 34433 2344556799999875
|
|
| >TIGR02990 ectoine_eutA ectoine utilization protein EutA | Back alignment and domain information |
|---|
Probab=82.77 E-value=9.7 Score=33.35 Aligned_cols=46 Identities=9% Similarity=-0.081 Sum_probs=29.7
Q ss_pred ccCCCHHHHHHHHHh-----Cc-EEEEcCCCCCCChH-HHHHHHhCCceEeeCC
Q 016535 341 YKNLLYRDLVKLLGG-----AV-VGIHSMIDEHFGIS-VVEYMAAGAIPIGKHF 387 (388)
Q Consensus 341 ~g~v~~~~l~~~~~~-----ad-v~v~ps~~E~~~~~-vlEAma~G~PVI~~~~ 387 (388)
.+.++.+.+.+...+ +| +|+.++-.-++... -+|.. .|+|||++|.
T Consensus 162 ia~i~p~~i~~~~~~~~~~~aDAifisCTnLrt~~vi~~lE~~-lGkPVlsSNq 214 (239)
T TIGR02990 162 MARISPDCIVEAALAAFDPDADALFLSCTALRAATCAQRIEQA-IGKPVVTSNQ 214 (239)
T ss_pred eeecCHHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHH-HCCCEEEHHH
Confidence 556788888887773 56 44454444444433 35655 8999999873
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=82.47 E-value=1.6 Score=33.81 Aligned_cols=41 Identities=20% Similarity=0.000 Sum_probs=28.4
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.+++..+|+.|-.|..+..---+-.+..+|+|+|.--+
T Consensus 59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECC
Confidence 67888998999999888666655556778888999987544
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E | Back alignment and domain information |
|---|
Probab=81.04 E-value=15 Score=31.45 Aligned_cols=81 Identities=20% Similarity=0.166 Sum_probs=55.0
Q ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhc-CCCCcEEEccCCCHHHHHHHHHhCcEEEEcC--------CCCCCCh--H
Q 016535 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIEL-KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSM--------IDEHFGI--S 371 (388)
Q Consensus 303 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps--------~~E~~~~--~ 371 (388)
.+.++.++...... ..++...+.+..+++ +.. +..+-..+.++..+.+.+||++++|- .....++ .
T Consensus 30 ~~~~i~~IptAs~~-~~~~~~~~~~a~~~l~G~~--~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 30 ARPKVLFVPTASGD-RDEYTARFYAAFESLRGVE--VSHLHLFDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCCeEEEECCCCCC-HHHHHHHHHHHHhhccCcE--EEEEeccCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 47889999887653 557888888888888 775 33333333567788999999999882 1122232 2
Q ss_pred HHHHHHhCCceEeeC
Q 016535 372 VVEYMAAGAIPIGKH 386 (388)
Q Consensus 372 vlEAma~G~PVI~~~ 386 (388)
+-|+...|+|+++..
T Consensus 107 l~~~~~~g~~i~G~S 121 (212)
T cd03146 107 LKAALERGVVYIGWS 121 (212)
T ss_pred HHHHHHCCCEEEEEC
Confidence 445666799998864
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption. |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=81.00 E-value=59 Score=31.95 Aligned_cols=45 Identities=13% Similarity=-0.111 Sum_probs=32.5
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++.+.|++|+.+ ++...++..+-+. +-..+++||+++|+|+|+-
T Consensus 344 ~g~~v~~w~pq~~---iL~h~~v~~fvtH--~G~ns~~ea~~~GvP~v~~ 388 (491)
T PLN02534 344 RGLLIKGWAPQVL---ILSHPAIGGFLTH--CGWNSTIEGICSGVPMITW 388 (491)
T ss_pred CCeeccCCCCHHH---HhcCCccceEEec--CccHHHHHHHHcCCCEEec
Confidence 5788889998755 6677776333222 3345899999999999974
|
|
| >TIGR02069 cyanophycinase cyanophycinase | Back alignment and domain information |
|---|
Probab=80.59 E-value=29 Score=30.67 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=63.5
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC-----CHHHHHHHHHhCc
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL-----LYRDLVKLLGGAV 357 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v-----~~~~l~~~~~~ad 357 (388)
+-..+.+.+-++..+ ++-+++++..... +..++.+.+.+..+++|.. ++..+.-- +.++..+.+.+||
T Consensus 12 ~~~~i~~~~~~lag~-----~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~-~v~~l~i~~r~~a~~~~~~~~l~~ad 84 (250)
T TIGR02069 12 GDREILREFVSRAGG-----EDAIIVIITSASE-EPREVGERYITIFSRLGVK-EVKILDVREREDASDENAIALLSNAT 84 (250)
T ss_pred ChHHHHHHHHHHhCC-----CCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCc-eeEEEecCChHHccCHHHHHHHhhCC
Confidence 444466766555433 4667788875433 2446677888888888884 44444322 2356778899999
Q ss_pred EEEEc--------CCCCCCCh--HHHHHHHhCCceEeeCC
Q 016535 358 VGIHS--------MIDEHFGI--SVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 358 v~v~p--------s~~E~~~~--~vlEAma~G~PVI~~~~ 387 (388)
++++. ..++..++ .+-|+...|+|++++..
T Consensus 85 ~I~~~GGnq~~l~~~l~~t~l~~~l~~~~~~G~vi~G~SA 124 (250)
T TIGR02069 85 GIFFTGGDQLRITSLLGDTPLLDRLRKRVHEGIILGGTSA 124 (250)
T ss_pred EEEEeCCCHHHHHHHHcCCcHHHHHHHHHHcCCeEEEccH
Confidence 77765 23445554 35688889999988753
|
This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. |
| >PF12996 DUF3880: DUF based on E | Back alignment and domain information |
|---|
Probab=80.53 E-value=5.3 Score=28.11 Aligned_cols=60 Identities=12% Similarity=0.114 Sum_probs=45.5
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC---CCCCCcEEEEEcccCC
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---RSTEYPAIISVAQFRP 280 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~---~~~~~~~il~vgrl~~ 280 (388)
....|.|++..+...+.+++.+ ..++..+|-++|+..+.+.... ...-.--|.|||++..
T Consensus 16 ~~~~~~iFt~D~~~~~~~~~~G--~~~V~yLPLAa~~~~~~p~~~~~~~~~~~~~dIsFVG~~y~ 78 (79)
T PF12996_consen 16 ANSYDYIFTFDRSFVEEYRNLG--AENVFYLPLAANPERFRPIPVDPEERKKYECDISFVGSLYP 78 (79)
T ss_pred CCCCCEEEEECHHHHHHHHHcC--CCCEEEccccCCHHHhCcccCCcccccccCCCEEEeCcCcc
Confidence 4667999999999999998863 3589999999999888775443 1233456899998753
|
rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture []. |
| >TIGR03682 arCOG04112 arCOG04112 universal archaeal diphthamide biosynthesis domain protein | Back alignment and domain information |
|---|
Probab=80.23 E-value=7.2 Score=35.62 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=48.3
Q ss_pred CcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCC
Q 016535 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~ 365 (388)
+.-=+++|.-.-+...+..+++++++++.|..-.+...|.++.+.+..+ ..|+||..+-.
T Consensus 213 ~~vGIlvgTl~~q~~~~~~~~l~~ll~~~gkk~y~i~~~~in~~kL~nf--~iD~fV~~aCP 272 (308)
T TIGR03682 213 KKFGILVSTKKGQRRPELAEELKKLLEELGKEALLILLDNISPDQLRNL--DFDAYVNTACP 272 (308)
T ss_pred CeEEEEEEccCcCCCHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHhcC--CcCEEEEccCC
Confidence 5666788876666677888999999999999877777899999888766 59999987543
|
This family of proteins has been observed universally in archaeal genomes and contains a match to the TIGR00322 model for the diphthamide biosynthesis protein 2-related domain. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 3e-12
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 17/133 (12%)
Query: 247 KRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR 306
P +TS + +SV + PEK LQLE F L +
Sbjct: 6 HHHSHPVETSKFKFKCYG-----DFWLSVNRIYPEKRIELQLEVF--------KKLQDEK 52
Query: 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366
L VG ER + I NV+F ++ +L+ L + + DE
Sbjct: 53 LYIVGWFSKGDHAERYA----RKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDE 108
Query: 367 HFGISVVEYMAAG 379
FG++ +E MA+G
Sbjct: 109 DFGLTPIEAMASG 121
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 15/192 (7%)
Query: 199 WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYP------ 251
+ + AD+ VN+ + + PDRI V P
Sbjct: 162 YRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVEL 221
Query: 252 --PCDTSGLQVLP--LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL 307
P + + L + V + +P K + ++A L P L
Sbjct: 222 YSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAV----AALFDRDPDRNL 277
Query: 308 QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367
+ + + + + EL V+ + F +LV + A + +E
Sbjct: 278 RVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNES 337
Query: 368 FGISVVEYMAAG 379
FG+ +E A+G
Sbjct: 338 FGLVAMEAQASG 349
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 2e-10
Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 16/160 (10%)
Query: 225 AMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQF-RPEKA 283
A+ NS + + P +T+ + +R E I+ + A
Sbjct: 198 AVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNA 256
Query: 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343
L +EA + ++ VG K K I L ++
Sbjct: 257 FTLIVEALK-IFVQKYDRSNEWKIISVGE-------------KHKDIALGKGIHLNSLGK 302
Query: 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
L D LL + +GI MI H +E G I
Sbjct: 303 LTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVI 342
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 20/177 (11%)
Query: 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---- 265
+ + +D+ S + +L I+ VY D + +
Sbjct: 145 SLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKE 204
Query: 266 ---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERL 322
S +I ++ FR K ++AF+ + ++DA +L VG D
Sbjct: 205 YGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDA-----KLLLVG------DGPEF 253
Query: 323 QSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
++ L ++ V F ++ +LL + + + E FG+ ++E MA G
Sbjct: 254 CTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACG 308
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 26/172 (15%)
Query: 221 CADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLERSTEY---------- 269
+ M+ + + +K + +R + + P + S E
Sbjct: 136 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQ 195
Query: 270 -PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK 328
++ V K +EA L L L L FV + + ++L +
Sbjct: 196 QNLLLQVGSDFGRKGVDRSIEA----LASLPESLRHNTLLFVVG---QDKPRKFEALAE- 247
Query: 329 SIELKVDGNVEFYKNLLYR-DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
+L V NV F R D+ +L+ A + +H E GI ++E + AG
Sbjct: 248 --KLGVRSNVHF---FSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG 294
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 2e-09
Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I V ++ EK + ++A +++ K D L G + +K + +
Sbjct: 5 IAMVGRYSNEKNQSVLIKAVALSKYKQDI-----VLLLKG------KGPDEKKIKLLAQK 53
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
L V F +L+++L + +H+ E I+ +E ++ G +P+
Sbjct: 54 LGVKAEFGFVN---SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPV 102
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 29/186 (15%)
Query: 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------- 262
+G+ D+ S +T + +G + + D
Sbjct: 130 SRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATR 189
Query: 263 --LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE 320
L + P I ++ P K ++A ++ A P +L VGS E
Sbjct: 190 KKLGFTDTTPVIACNSRLVPRKGQDSLIKAM----PQVIAARPDAQLLIVGS---GRYES 242
Query: 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA-------VVGIHSMIDEHFGISVV 373
L+ L V NV+F L Y+D++ L A + E GI +
Sbjct: 243 TLRRL-----ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYL 297
Query: 374 EYMAAG 379
E A G
Sbjct: 298 EAQACG 303
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 2e-07
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE---ERLQSLK 326
P I V++F P K +E + RK+ +P +L VG + E ++L+
Sbjct: 232 PIITQVSRFDPWKGIFDVIEIY----RKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
+ V + R++ + V + I E FG++V E M G
Sbjct: 288 KIGEDYDVKVLTNL-IGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG 339
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 1e-05
Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 16/141 (11%)
Query: 249 VYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ 308
+Y + + L + + + P + ++A+ K +E + +L L
Sbjct: 554 LYSDVENK--EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYG-KNTRLR---ELANLV 607
Query: 309 FVGSCR---NKSDEER--LQSLKDKSIELKVDGNVEFYKNLLYRDLV-----KLLGGAVV 358
VG R +K +EE+ ++ + D E K++G + + + R +
Sbjct: 608 VVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGA 667
Query: 359 GIHSMIDEHFGISVVEYMAAG 379
+ + E FG++VVE M G
Sbjct: 668 FVQPALYEAFGLTVVEAMTCG 688
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 51/374 (13%), Positives = 104/374 (27%), Gaps = 82/374 (21%)
Query: 47 GGGGERVLWCAVKAIQEESPD--LDCIVY--TGDHDAFPDSLLARAVD---RFGVELLHP 99
G G+ + A+ +D ++ + P+++L +
Sbjct: 159 LGSGKTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYL---------SWEALCKFTPLYYFDTSGY 150
+ + R + + + + L +W A F+
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA---------FN---- 263
Query: 151 AFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF 210
C+++ T + ++ + + S+ +++ ++ S
Sbjct: 264 ---------LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-------L 307
Query: 211 FSWMYGLVGSCADL---AMVNSSWTQSHI-EKLWGIPDRIKRV-YPPCDTSGLQVLPLER 265
+ L DL + + S I E + + CD L
Sbjct: 308 LKY---LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK-------LTT 357
Query: 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER-LQS 324
E S+ P + + + SV A +P L + KSD +
Sbjct: 358 IIE----SSLNVLEPAEYRKM-FDRLSV-FPP-SAHIPTILLSLIWFDVIKSDVMVVVNK 410
Query: 325 LKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP-- 382
L S+ K +Y +L L +H I +H+ I + + IP
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVDHYNIP-KTFDSDDLIPPY 468
Query: 383 --------IGKHFK 388
IG H K
Sbjct: 469 LDQYFYSHIGHHLK 482
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 3e-04
Identities = 29/211 (13%), Positives = 58/211 (27%), Gaps = 23/211 (10%)
Query: 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVG-------SCADLAMVNSSWTQSHIEKL 239
+ N +A + KIV Y M S S I
Sbjct: 92 IVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDI-CN 150
Query: 240 WGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQFRPEKAHPLQLEAFSVAL 295
+G I V DT + L + +++ + K + + A
Sbjct: 151 YGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAA---- 206
Query: 296 RKLDADLPRPRLQFVGSCRNKS------DEERLQSLKDKSIELKVDGNVEFYKNLLYR-D 348
+ + P +++F+ + ++S R + + +L
Sbjct: 207 ARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266
Query: 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
+ + V ++ E FG+ E G
Sbjct: 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLG 297
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 4e-04
Identities = 25/168 (14%), Positives = 42/168 (25%), Gaps = 31/168 (18%)
Query: 223 DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
+ SS Q G D + P D + + + + E ++ + + P K
Sbjct: 120 PVGCTYSSRAQRA---HCGGGDDAPVIPIPVDPARYRSAADQVAKE-DFLLFMGRVSPHK 175
Query: 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342
A RL G + E I + VE
Sbjct: 176 GALEAAAF---------AHACGRRLVLAGPA---WEPEYFDE-----ITRRYGSTVEPIG 218
Query: 343 NLLYRDLVKLLGGAVVGIH----------SMIDEHFGISVVEYMAAGA 380
+ + LL A + + E V E +G
Sbjct: 219 EVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT 266
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 388 | |||
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.98 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.93 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.92 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.89 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.87 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.87 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.87 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.87 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.87 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.86 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.85 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.85 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.84 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.71 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.67 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.67 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.65 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.62 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.47 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.42 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.38 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.37 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.34 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.27 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.26 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.24 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.19 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.04 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.01 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.98 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 98.97 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.86 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.7 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.63 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.54 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.5 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.47 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.27 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.97 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.86 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.61 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.55 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 97.55 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.41 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.36 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 96.82 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 95.54 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 94.94 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 94.38 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 90.28 | |
| 3lkv_A | 302 | Uncharacterized conserved domain protein; ATPase b | 90.08 | |
| 3en0_A | 291 | Cyanophycinase; serine protease, beta peptide spec | 81.37 |
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=270.89 Aligned_cols=327 Identities=16% Similarity=0.056 Sum_probs=214.1
Q ss_pred ccceEEEeccccC--CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHH---hhh--h--hceecCCCCeeE
Q 016535 33 RTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR---AVD--R--FGVELLHPPKVV 103 (388)
Q Consensus 33 ~~~~I~~~~p~~~--~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~---~~~--~--~~i~~~~~~~~~ 103 (388)
|+|||+++.+... ..||+++++.+++++|.++| |+|+++++...........+ ... . ......+++.++
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 78 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIY 78 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEE
Confidence 5799999986642 34699999999999999999 88999986642111100000 000 0 000022344555
Q ss_pred Eecccccccc-CCCC-ceeh-hhhhhhHHHHHHHHHh-----hcCCcEEEecCCcccccc--hhhhcCCeEEEEEecccc
Q 016535 104 HLYRRKWIEE-STYP-RFTM-IGQSFGSVYLSWEALC-----KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTI 173 (388)
Q Consensus 104 ~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~~~l~-----~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~ 173 (388)
.++. ..... ..+. .... ............+.+. ..+||+||.+.......+ +.+..++|.++++|....
T Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 79 RIGG-GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp EEES-GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred Eecc-hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 5543 22221 1221 1111 1111111111222222 458999987754332222 335679999999997542
Q ss_pred chhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCC
Q 016535 174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (388)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ng 252 (388)
......... . ..+..........+++..++.+|.++++|+..++.....++. ..++.++|||
T Consensus 158 ~~~~~~~~~-------------~----~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng 220 (439)
T 3fro_A 158 SKLPAFYFH-------------E----AGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG 220 (439)
T ss_dssp CCEEHHHHH-------------H----TTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred ccCchHHhC-------------c----cccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence 110000000 0 000000000001246777788999999999999885553322 5789999999
Q ss_pred CCCCCCccCCCCC---------------CCCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCC
Q 016535 253 CDTSGLQVLPLER---------------STEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK 316 (388)
Q Consensus 253 vd~~~~~~~~~~~---------------~~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~ 316 (388)
+|.+.+.+..... .++ ..++|+||+. +.||++.+++|++.+.++... ++++|+++|+|
T Consensus 221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 294 (439)
T 3fro_A 221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 294 (439)
T ss_dssp CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGG--GGEEEEEECCC---
T ss_pred CCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccC--CCeEEEEEcCC---
Confidence 9998886542110 133 8999999999 999999999999999875311 58999999987
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 317 SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 317 ~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+.++.+.+++++++++ +.+.|.|+++++++.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 295 -~~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~ 363 (439)
T 3fro_A 295 -DPELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG 363 (439)
T ss_dssp -CHHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST
T ss_pred -ChhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC
Confidence 4555678999999988 68889999999999999999999999999999999999999999999999864
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=271.27 Aligned_cols=318 Identities=15% Similarity=0.121 Sum_probs=209.0
Q ss_pred cCccceEEEeccccC--------CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCee
Q 016535 31 RNRTTSVAFFHPNTN--------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV 102 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~--------~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 102 (388)
.++.|||+++.+... ..||+++++.+++++|.++| |+|++++..... . . . ......+++.+
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~--~-~----~--~~~~~~~~v~v 85 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRP--S-Q----G--EIVRVAENLRV 85 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCG--G-G----C--SEEEEETTEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCC--C-C----c--ccccccCCeEE
Confidence 446789999975432 34699999999999999999 888888865411 0 0 0 00112233344
Q ss_pred EEeccccccccCCCCceehhhhhhhHHH-HHHHH-Hhhc-CCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhh
Q 016535 103 VHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM 177 (388)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-l~~~-~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~ 177 (388)
+.+....+.. ..... +...+..+. ...+. +.+. +||+||.+........ +++..++|.++++|.......
T Consensus 86 ~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~- 160 (438)
T 3c48_A 86 INIAAGPYEG---LSKEE-LPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN- 160 (438)
T ss_dssp EEECCSCSSS---CCGGG-GGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS-
T ss_pred EEecCCCccc---cchhH-HHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc-
Confidence 4443211100 00000 111111111 11122 3333 4999986643221111 344678999999986431100
Q ss_pred hhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCC
Q 016535 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS 256 (388)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~ 256 (388)
. ..... .. .......++++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+
T Consensus 161 ------~--------~~~~~---~~---~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~ 220 (438)
T 3c48_A 161 ------S--------YRDDS---DT---PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE 220 (438)
T ss_dssp ------C--------C-------CC---HHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred ------c--------ccccc---CC---cchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence 0 00000 00 0011223457778889999999999999999887765 46799999999988
Q ss_pred CCccCCCCC----------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHH
Q 016535 257 GLQVLPLER----------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLK 326 (388)
Q Consensus 257 ~~~~~~~~~----------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~ 326 (388)
.+.+.+... ..+..+++++|++.++||++.+++|++.+.++.+. .+++|+++|.... ++++.++++
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~--~~~~l~i~G~~~~--~g~~~~~l~ 296 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD--RNLRVIICGGPSG--PNATPDTYR 296 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT--CSEEEEEECCBC--------CHHH
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC--cceEEEEEeCCCC--CCcHHHHHH
Confidence 776532211 13568899999999999999999999999887511 2799999997210 123344899
Q ss_pred HHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 327 ~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
++++++++.++|.|+|+++++++.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 297 ~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~ 358 (438)
T 3c48_A 297 HMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG 358 (438)
T ss_dssp HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT
T ss_pred HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999863
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=264.48 Aligned_cols=290 Identities=17% Similarity=0.158 Sum_probs=208.9
Q ss_pred CccceEEEeccccC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccc
Q 016535 32 NRTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (388)
Q Consensus 32 ~~~~~I~~~~p~~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (388)
+++|||+++.+... ..||+++++.+++++| +| ++|++++.... .......... .+..++.+.....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~ 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP--ESIVVFASTQN---AEEAHAYDKT------LDYEVIRWPRSVM 68 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG--GGEEEEEECSS---HHHHHHHHTT------CSSEEEEESSSSC
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC--CeEEEEECCCC---ccchhhhccc------cceEEEEcccccc
Confidence 35789999987443 4569999999999999 58 78888887642 1111122111 1223344333111
Q ss_pred cccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCe-EEEEEeccccchhhhhhhhcCCcc
Q 016535 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR-VICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~-~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
++. ........+.+.+.+||+||.+...+.... +++..++| ++.+.|.....
T Consensus 69 -----~~~-------~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------- 123 (394)
T 3okp_A 69 -----LPT-------PTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG------------- 123 (394)
T ss_dssp -----CSC-------HHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-------------
T ss_pred -----ccc-------hhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-------------
Confidence 111 122233445677889999987655443332 34455675 67777853210
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC---
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--- 264 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~--- 264 (388)
. .......++.+..++.+|.++++|+..++.+.+.++...++.++|||+|.+.+.+....
T Consensus 124 --------------~---~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~ 186 (394)
T 3okp_A 124 --------------W---SMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS 186 (394)
T ss_dssp --------------H---TTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHH
T ss_pred --------------h---hhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhH
Confidence 0 01122333466777889999999999999999988766799999999998877652111
Q ss_pred -------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 265 -------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 265 -------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
...+...++|+|++.+.||++.+++|++.+.++. ++++|+++|.++..+ .+++++ .++.++
T Consensus 187 ~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~~------~l~~~~--~~~~~~ 254 (394)
T 3okp_A 187 ATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAAR----PDAQLLIVGSGRYES------TLRRLA--TDVSQN 254 (394)
T ss_dssp HHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHS----TTCEEEEECCCTTHH------HHHHHT--GGGGGG
T ss_pred HHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhC----CCeEEEEEcCchHHH------HHHHHH--hcccCe
Confidence 1234589999999999999999999999998885 899999999775433 677776 456689
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCC-------CCCChHHHHHHHhCCceEeeCCC
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMID-------EHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~-------E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|+|+|+++++++.++|+.||++|+||.. |+||++++|||++|+|||+++.+
T Consensus 255 v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 255 VKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp EEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 9999999999999999999999999998 99999999999999999999863
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=272.76 Aligned_cols=328 Identities=16% Similarity=0.067 Sum_probs=215.4
Q ss_pred cceEEEecccc------------CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceec--CCC
Q 016535 34 TTSVAFFHPNT------------NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL--LHP 99 (388)
Q Consensus 34 ~~~I~~~~p~~------------~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~--~~~ 99 (388)
+|||+++.+.. ...||+++++.+++++|.++| |+|++++....... . ....... ..+ ..+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~--~-~~~~~~~-~~~~~~~g 80 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDEN--W-PEFSGEI-DYYQETNK 80 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT--CEEEEEEECCCBTT--B-GGGCCSE-EECTTCSS
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC--CeEEEEeCCCCccc--c-cchhhhH-HhccCCCC
Confidence 58999998642 123699999999999999999 88888886532110 0 0000000 011 233
Q ss_pred CeeEEeccccccccCCCCceehhhhhhhHHHHHHHHHhh--cCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccch
Q 016535 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISL 175 (388)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~ 175 (388)
+.++.++.... ....................+.+++ .+||+||.+........ +++..++|.++++|......
T Consensus 81 v~v~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~~~ 157 (499)
T 2r60_A 81 VRIVRIPFGGD---KFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQK 157 (499)
T ss_dssp EEEEEECCSCS---SCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHHHH
T ss_pred eEEEEecCCCc---CCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccccc
Confidence 44444432110 0000000000001111222334555 48999987654221112 34467899999999643111
Q ss_pred hhhhhhhcCCccccCCccccccchhhhhhhHH-HHHHHHHHHHHhccCCEEEECChhHHHHHHHH--hC------CCCce
Q 016535 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVY-YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL--WG------IPDRI 246 (388)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~--~~------~~~~~ 246 (388)
. ..... ...........+ +....++++..++.+|.++++|+..++.+.+. ++ ...++
T Consensus 158 ~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki 223 (499)
T 2r60_A 158 M--EKLNV------------NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKF 223 (499)
T ss_dssp H--HTTCC------------CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGE
T ss_pred c--hhhcc------------CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCe
Confidence 0 00000 000000111111 11223457888899999999999999998876 65 35689
Q ss_pred EEEcCCCCCCCCccCCCC----------------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 016535 247 KRVYPPCDTSGLQVLPLE----------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFV 310 (388)
Q Consensus 247 ~vi~ngvd~~~~~~~~~~----------------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv 310 (388)
.++|||+|.+.+.+.... ...+..+++|+||+.+.||++.+++|++.+.++.+ ..++++++
T Consensus 224 ~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~---~~~~l~i~ 300 (499)
T 2r60_A 224 SVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD---KANLVLTL 300 (499)
T ss_dssp EECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH---HCEEEEEE
T ss_pred EEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC---CceEEEEE
Confidence 999999998877654320 12355889999999999999999999999987641 24689999
Q ss_pred eCCCCC---------ccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhC----cEEEEcCCCCCCChHHHHHHH
Q 016535 311 GSCRNK---------SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMA 377 (388)
Q Consensus 311 G~~~~~---------~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~a----dv~v~ps~~E~~~~~vlEAma 377 (388)
|+.+.. ++.+|.++++++++++++.++|+|+|+++++++.++|+.| |++|+||..|+||++++|||+
T Consensus 301 G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma 380 (499)
T 2r60_A 301 RGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMA 380 (499)
T ss_dssp SSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHH
T ss_pred CCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHH
Confidence 973211 1223477999999999999999999999999999999999 999999999999999999999
Q ss_pred hCCceEeeCC
Q 016535 378 AGAIPIGKHF 387 (388)
Q Consensus 378 ~G~PVI~~~~ 387 (388)
||+|||+++.
T Consensus 381 ~G~PvI~s~~ 390 (499)
T 2r60_A 381 SGLPAVVTRN 390 (499)
T ss_dssp TTCCEEEESS
T ss_pred cCCCEEEecC
Confidence 9999999986
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=260.32 Aligned_cols=298 Identities=17% Similarity=0.165 Sum_probs=197.6
Q ss_pred hcccCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc
Q 016535 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (388)
Q Consensus 28 ~~~~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 107 (388)
-.+..++|||+++.+... +||+++++.+++++|.++| |+|++++.... ....+.... ....+. ....+.+
T Consensus 34 ~~~~~~~mkIl~v~~~~~-~GG~~~~~~~l~~~L~~~G--~~v~v~~~~~~---~~~~~~~~~-~~~~~~-~~~~~~~-- 103 (416)
T 2x6q_A 34 KAEKLKGRSFVHVNSTSF-GGGVAEILHSLVPLLRSIG--IEARWFVIEGP---TEFFNVTKT-FHNALQ-GNESLKL-- 103 (416)
T ss_dssp HHHTTTTCEEEEEESCSS-SSTHHHHHHHHHHHHHHTT--CEEEEEECCCC---HHHHHHHHH-HHHHHT-TCCSCCC--
T ss_pred hhhhhhccEEEEEeCCCC-CCCHHHHHHHHHHHHHhCC--CeEEEEEccCC---cchhhhhcc-cceeec-ccccccc--
Confidence 344567899999998864 4599999999999999999 77777765531 211111110 000010 0000000
Q ss_pred ccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhhcCCcc
Q 016535 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (388)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~ 187 (388)
+. ..............+.+.+.+||+||.+......+......++|+++++|......
T Consensus 104 ---------~~-~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------ 161 (416)
T 2x6q_A 104 ---------TE-EMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSSP------------ 161 (416)
T ss_dssp ---------CH-HHHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSCEEEECCSCCSSC------------
T ss_pred ---------cH-HHHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCCEEEEEccccCCc------------
Confidence 00 00001111111223345667899998776543332211123388898888633100
Q ss_pred ccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEE-ECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC--
Q 016535 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAM-VNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264 (388)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii-~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~-- 264 (388)
....++ ++.+ .+..+|.++ ++|+..++.+ + ..++.++|||+|...+.+.+..
T Consensus 162 ----------------~~~~~~---~~~~-~~~~~~~~i~~~s~~~~~~~----~-~~~~~vi~ngvd~~~~~~~~~~~~ 216 (416)
T 2x6q_A 162 ----------------NREFWE---FLRR-FVEKYDRYIFHLPEYVQPEL----D-RNKAVIMPPSIDPLSEKNVELKQT 216 (416)
T ss_dssp ----------------CHHHHH---HHHH-HHTTSSEEEESSGGGSCTTS----C-TTTEEECCCCBCTTSTTTSCCCHH
T ss_pred ----------------cHHHHH---HHHH-HHHhCCEEEEechHHHHhhC----C-ccceEEeCCCCChhhhcccccChh
Confidence 001111 2233 344556655 6777655422 2 3588899999997665432111
Q ss_pred ----------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCC
Q 016535 265 ----------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV 334 (388)
Q Consensus 265 ----------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l 334 (388)
...+..+++++||+.+.||++.+++|++.+.++. |+++|+++|+++.. +.++.+.++++++++++
T Consensus 217 ~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~-~~~~~~~l~~~~~~~~~ 291 (416)
T 2x6q_A 217 EILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKI----PGVQLLLVGVMAHD-DPEGWIYFEKTLRKIGE 291 (416)
T ss_dssp HHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHC----TTCEEEEEECCCTT-CHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC----CCeEEEEEecCccc-chhHHHHHHHHHHHhCC
Confidence 1135688999999999999999999999998885 89999999998653 34556678889999999
Q ss_pred CCcEEEccCCC---HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 335 DGNVEFYKNLL---YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 335 ~~~V~~~g~v~---~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.++|+|+|+++ ++++.++|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~ 347 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV 347 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC
Confidence 89999999654 789999999999999999999999999999999999999985
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=258.32 Aligned_cols=287 Identities=16% Similarity=0.111 Sum_probs=198.8
Q ss_pred EEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccCCC
Q 016535 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (388)
Q Consensus 37 I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 116 (388)
.....|.. ||+++++.+++++|.++| |+|++++..... .. . . ..+++.+..+.... +
T Consensus 19 ~~~~~p~~---GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~---~~-~--~------~~~~i~~~~~~~~~------~ 75 (394)
T 2jjm_A 19 GITCYPSV---GGSGVVGTELGKQLAERG--HEIHFITSGLPF---RL-N--K------VYPNIYFHEVTVNQ------Y 75 (394)
T ss_dssp EEECCC-----CHHHHHHHHHHHHHHHTT--CEEEEECSSCC----------C------CCTTEEEECCCCC--------
T ss_pred ehhcCCCC---CCHHHHHHHHHHHHHhCC--CEEEEEeCCCCC---cc-c--c------cCCceEEEeccccc------c
Confidence 33445654 799999999999999999 889999875411 00 0 0 01111111111110 0
Q ss_pred CceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhh-hc--CCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IF--GCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~-~~--~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
+.+......+.......+.+.+.+||+||.+...+..+. +++ .. ++|.+.++|..... . ..
T Consensus 76 ~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~----~~-------- 141 (394)
T 2jjm_A 76 SVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--V----LG-------- 141 (394)
T ss_dssp --CCSCCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH--T----TT--------
T ss_pred cccccccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc--c----cC--------
Confidence 001111111222233445567789999987755433222 333 32 58999988863210 0 00
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC-------
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE------- 264 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~------- 264 (388)
.. ..+..+++..++.+|.++++|+..++.+.+.++...++.++|||+|.+.+.+....
T Consensus 142 ----~~-----------~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~ 206 (394)
T 2jjm_A 142 ----SD-----------PSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYG 206 (394)
T ss_dssp ----TC-----------TTTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTT
T ss_pred ----CC-----------HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcC
Confidence 00 01122456667889999999999999999887756789999999998877653211
Q ss_pred CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 265 ~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
...++..++++|++.+.||++.+++|++.+.++ ++++|+++|.++.. +++++.++++++.++|.|+|+.
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~------~~l~~~~~~~~l~~~v~~~g~~ 275 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-----VDAKLLLVGDGPEF------CTILQLVKNLHIEDRVLFLGKQ 275 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-----SCCEEEEECCCTTH------HHHHHHHHTTTCGGGBCCCBSC
T ss_pred CCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-----CCCEEEEECCchHH------HHHHHHHHHcCCCCeEEEeCch
Confidence 013458999999999999999999999999776 47999999977543 3899999999998999999974
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.++|+.||++|+||..|+||++++|||+||+|||+++.+
T Consensus 276 --~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~ 317 (394)
T 2jjm_A 276 --DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG 317 (394)
T ss_dssp --SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT
T ss_pred --hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC
Confidence 889999999999999999999999999999999999999863
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=255.36 Aligned_cols=285 Identities=14% Similarity=0.105 Sum_probs=195.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.+.....||+++++.+++++|.++| |+|++++...... ..+++++..++...+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~---------------~~~~~~v~~~~~~~~---- 59 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG--HHVRVYTQSWEGD---------------CPKAFELIQVPVKSH---- 59 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT--CCEEEEESEECSC---------------CCTTCEEEECCCCCS----
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC--CeEEEEecCCCCC---------------CCCCcEEEEEccCcc----
Confidence 7899997764445699999999999999999 7788887653110 011223333322111
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-h-hhhcCCeEEEEEeccccchhhhhhhhcCCccccCCc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~-~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (388)
. .............+.+.+.+||+||.+...+.... + .+....+.+.+.|.
T Consensus 60 --~---~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 112 (374)
T 2iw1_A 60 --T---NHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKG---------------------- 112 (374)
T ss_dssp --S---HHHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHHCC----------------------
T ss_pred --c---chhhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccceeeeeccc----------------------
Confidence 0 01111222223344567789999987654321111 1 00111111110110
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhc--cCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCC----
Q 016535 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGS--CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER---- 265 (388)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~---- 265 (388)
+.... ...++.+.++++..++ .+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+.....
T Consensus 113 ------~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~ 185 (374)
T 2iw1_A 113 ------FLYRL-TSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREI 185 (374)
T ss_dssp ------HHHHT-SHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHH
T ss_pred ------chhhh-cHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHH
Confidence 00000 0112233445665554 7999999999999999887765 46899999999988776543211
Q ss_pred -------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHH-hcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 266 -------STEYPAIISVAQFRPEKAHPLQLEAFSVALRK-LDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 266 -------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~-~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
..++.+++|+||+.+.||++.+++|++.+.++ . ++++|+++|.++. ++++++++++++.++
T Consensus 186 ~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~----~~~~l~i~G~g~~-------~~~~~~~~~~~~~~~ 254 (374)
T 2iw1_A 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLR----HNTLLFVVGQDKP-------RKFEALAEKLGVRSN 254 (374)
T ss_dssp HHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHH----HTEEEEEESSSCC-------HHHHHHHHHHTCGGG
T ss_pred HHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccC----CceEEEEEcCCCH-------HHHHHHHHHcCCCCc
Confidence 13558999999999999999999999998765 3 5899999998752 278888999999899
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
|+|+|+. +++.++|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus 255 v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~ 302 (374)
T 2iw1_A 255 VHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV 302 (374)
T ss_dssp EEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETT
T ss_pred EEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecC
Confidence 9999985 78999999999999999999999999999999999999986
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=274.75 Aligned_cols=332 Identities=14% Similarity=0.138 Sum_probs=213.8
Q ss_pred ccCccceEEEecccc----------CCCCChhhHHHH--------HHHHHhhcCCCc--eEEEEecCCCCCchhHHHHhh
Q 016535 30 RRNRTTSVAFFHPNT----------NDGGGGERVLWC--------AVKAIQEESPDL--DCIVYTGDHDAFPDSLLARAV 89 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~----------~~gGG~~~~~~~--------l~~~L~~~g~~~--~v~v~~~~~~~~~~~~~~~~~ 89 (388)
|-.+.++|+++.|.. ...||...++.+ ++++|.++|+++ +|.++|.....+.+ .+..
T Consensus 274 ~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g---~~y~ 350 (816)
T 3s28_A 274 RVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG---TTCG 350 (816)
T ss_dssp HSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT---SSTT
T ss_pred cCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC---CccC
Confidence 445688999987766 455688999985 666677799654 35688876421111 0111
Q ss_pred hhhceec--CCCCeeEEecccc-------ccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhh
Q 016535 90 DRFGVEL--LHPPKVVHLYRRK-------WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR 158 (388)
Q Consensus 90 ~~~~i~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~ 158 (388)
... ..+ .+++.+++++.++ |+++. ..+..+..+.......+......+||+||.+........ +++
T Consensus 351 ~~~-e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~--~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar 427 (816)
T 3s28_A 351 ERL-ERVYDSEYCDILRVPFRTEKGIVRKWISRF--EVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAH 427 (816)
T ss_dssp SSE-EECTTCSSEEEEEECEEETTEEECSCCCTT--TCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHH
T ss_pred Ccc-eeecCcCCeEEEEecCCCccccccccccHH--HHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHH
Confidence 100 111 1244566654322 22211 111112111111111111122347999987643222122 455
Q ss_pred hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHH-HHHHHHHHhccCCEEEECChhHHHHHH
Q 016535 159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF-FSWMYGLVGSCADLAMVNSSWTQSHIE 237 (388)
Q Consensus 159 ~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~ii~~S~~~~~~l~ 237 (388)
..++|.+.+.|......... ....+ ......|... ....++.+++.+|.++++|+..++.+.
T Consensus 428 ~~gvP~V~T~Hsl~~~k~~~----------------~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~ 490 (816)
T 3s28_A 428 KLGVTQCTIAHALEKTKYPD----------------SDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSK 490 (816)
T ss_dssp HHTCCEEEECSCCHHHHSTT----------------TTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCS
T ss_pred HcCCCEEEEEeccccccccc----------------ccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 78999999998633100000 00000 0111111111 112367789999999999999888532
Q ss_pred HH---hCC-------------------CCceEEEcCCCCCCCCccCCCCC----------------------------CC
Q 016535 238 KL---WGI-------------------PDRIKRVYPPCDTSGLQVLPLER----------------------------ST 267 (388)
Q Consensus 238 ~~---~~~-------------------~~~~~vi~ngvd~~~~~~~~~~~----------------------------~~ 267 (388)
+. +.. ..++.+||||+|.+.|.+..... ..
T Consensus 491 ~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~ 570 (816)
T 3s28_A 491 ETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDK 570 (816)
T ss_dssp SSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCT
T ss_pred HHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCC
Confidence 21 110 12899999999998876543111 24
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC-----CccHHHHHHHHHHHHhcCCCCcEEEcc
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-----KSDEERLQSLKDKSIELKVDGNVEFYK 342 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~-----~~~~~~~~~l~~~~~~~~l~~~V~~~g 342 (388)
++++|+|+||+.+.||++.+++|++.+.+.. ++++|+++|++++ .++.++.++++++++++++.++|.|+|
T Consensus 571 ~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~----~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG 646 (816)
T 3s28_A 571 KKPILFTMARLDRVKNLSGLVEWYGKNTRLR----ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWIS 646 (816)
T ss_dssp TSCEEEEECCCCTTTTHHHHHHHHHHCHHHH----HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEEC
T ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHHhhC----CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEcc
Confidence 5689999999999999999999999998775 7899999999872 223457789999999999999999999
Q ss_pred CCC----HHHHHHHHH-hCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 343 NLL----YRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 343 ~v~----~~~l~~~~~-~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++ .+++..+|+ ++|++|+||.+|+||++++||||||+|||+|+.+
T Consensus 647 ~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G 697 (816)
T 3s28_A 647 SQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 697 (816)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB
T ss_pred CccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC
Confidence 554 589999998 5799999999999999999999999999999863
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-32 Score=254.71 Aligned_cols=290 Identities=15% Similarity=0.137 Sum_probs=201.1
Q ss_pred ccceEEEeccccC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccc
Q 016535 33 RTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (388)
Q Consensus 33 ~~~~I~~~~p~~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 111 (388)
+.|||+++.++.. ..||+++++.+++++|.++| ++|++++...... .. .+ +.. . .. .++.++....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~--~~-~~----~~~-~-~~-~~~~~~~~~~- 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG--HEVSVLAPASPHV--KL-PD----YVV-S-GG-KAVPIPYNGS- 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT--CEEEEEESCCTTS--CC-CT----TEE-E-CC-CCC--------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC--CeEEEEecCCccc--cC-Cc----ccc-c-CC-cEEeccccCC-
Confidence 5789999998764 44699999999999999999 8888888764211 00 00 000 0 00 1111111000
Q ss_pred ccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
...+... ........+.+.+.+||+||.+........ +.+..++|.++++|......
T Consensus 86 ----~~~~~~~---~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------- 144 (406)
T 2gek_A 86 ----VARLRFG---PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS-------------- 144 (406)
T ss_dssp ---------CC---HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH--------------
T ss_pred ----ccccccc---HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh--------------
Confidence 0001000 011223344567779999876655433322 33456899999999633110
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCC--CCC
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--RST 267 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~--~~~ 267 (388)
. .......+++ ..++.+|.++++|+..++.+.+.++. .++ ++|||+|.+.+.+.... ...
T Consensus 145 ------------~---~~~~~~~~~~-~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~-vi~~~v~~~~~~~~~~~~~~~~ 206 (406)
T 2gek_A 145 ------------L---TLSVFQGILR-PYHEKIIGRIAVSDLARRWQMEALGS-DAV-EIPNGVDVASFADAPLLDGYPR 206 (406)
T ss_dssp ------------H---HHHHHHSTTH-HHHTTCSEEEESSHHHHHHHHHHHSS-CEE-ECCCCBCHHHHHTCCCCTTCSC
T ss_pred ------------h---hHHHHHHHHH-HHHhhCCEEEECCHHHHHHHHHhcCC-CcE-EecCCCChhhcCCCchhhhccC
Confidence 0 0011111122 66789999999999999999887763 578 99999997655443211 112
Q ss_pred CCcEEEEEccc-CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl-~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+...++|+|++ .+.||++.+++|++.+.++. ++++|+++|.++. +++++.++++ .++|.|+|++++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~~~~-------~~l~~~~~~~--~~~v~~~g~~~~ 273 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAVLLAALPKLVARF----PDVEILIVGRGDE-------DELREQAGDL--AGHLRFLGQVDD 273 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTS----TTCEEEEESCSCH-------HHHHHHTGGG--GGGEEECCSCCH
T ss_pred CCeEEEEEeeeCccccCHHHHHHHHHHHHHHC----CCeEEEEEcCCcH-------HHHHHHHHhc--cCcEEEEecCCH
Confidence 45799999999 99999999999999998775 7999999998643 3788888776 579999999999
Q ss_pred HHHHHHHHhCcEEEEcCC-CCCCChHHHHHHHhCCceEeeCC
Q 016535 347 RDLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~-~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+.||++|+||. .|+||++++|||+||+|||+++.
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~ 315 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL 315 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC
Confidence 999999999999999995 99999999999999999999985
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=248.90 Aligned_cols=250 Identities=15% Similarity=0.042 Sum_probs=190.1
Q ss_pred ccceEEEeccc------------c-CCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCC
Q 016535 33 RTTSVAFFHPN------------T-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP 99 (388)
Q Consensus 33 ~~~~I~~~~p~------------~-~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~ 99 (388)
+.|||+++.+. . ...||+++++.+++++|.++| |+|++++........ .++.
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~~---------~~~~---- 66 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG--HEVFLLGAPGSPAGR---------PGLT---- 66 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT--CEEEEESCTTSCCCS---------TTEE----
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC--CeEEEEecCCCCCCC---------Ccce----
Confidence 45899999887 1 234699999999999999999 889998876421100 0111
Q ss_pred CeeEEeccccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhh
Q 016535 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMIS 179 (388)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~ 179 (388)
++.. +. .....+.+.+.+||+||.+..... ...++..++| ++++|.....
T Consensus 67 --~~~~-----------~~----------~~~l~~~l~~~~~Dvi~~~~~~~~-~~~~~~~~~p-v~~~h~~~~~----- 116 (342)
T 2iuy_A 67 --VVPA-----------GE----------PEEIERWLRTADVDVVHDHSGGVI-GPAGLPPGTA-FISSHHFTTR----- 116 (342)
T ss_dssp --ECSC-----------CS----------HHHHHHHHHHCCCSEEEECSSSSS-CSTTCCTTCE-EEEEECSSSB-----
T ss_pred --eccC-----------Cc----------HHHHHHHHHhcCCCEEEECCchhh-HHHHhhcCCC-EEEecCCCCC-----
Confidence 1110 00 012334566779999987765432 2245567899 9999964310
Q ss_pred hhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCc
Q 016535 180 RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (388)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~ 259 (388)
. ..+|.++++|+..++.+.+ ..++.++|||+|.+.+.
T Consensus 117 -----------------~----------------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~ 153 (342)
T 2iuy_A 117 -----------------P----------------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYR 153 (342)
T ss_dssp -----------------C----------------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSC
T ss_pred -----------------c----------------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcC
Confidence 0 0189999999999998876 45788999999987776
Q ss_pred cCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 016535 260 VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (388)
Q Consensus 260 ~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~ 339 (388)
+..... .+...++|+||+.+.||++.+++|++.+ +++|+++|.|+..+ .+++++++++ ++|+
T Consensus 154 ~~~~~~-~~~~~i~~vG~~~~~Kg~~~li~a~~~~---------~~~l~i~G~g~~~~------~l~~~~~~~~--~~v~ 215 (342)
T 2iuy_A 154 SAADQV-AKEDFLLFMGRVSPHKGALEAAAFAHAC---------GRRLVLAGPAWEPE------YFDEITRRYG--STVE 215 (342)
T ss_dssp CSTTCC-CCCSCEEEESCCCGGGTHHHHHHHHHHH---------TCCEEEESCCCCHH------HHHHHHHHHT--TTEE
T ss_pred cccccC-CCCCEEEEEeccccccCHHHHHHHHHhc---------CcEEEEEeCcccHH------HHHHHHHHhC--CCEE
Confidence 543321 3446899999999999999999999987 78999999886433 6777777777 6999
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCC----------CCCCChHHHHHHHhCCceEeeCCC
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMI----------DEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~----------~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|+|+++++++.++|+.||++|+||. .|+||++++|||+||+|||+++.+
T Consensus 216 ~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~ 274 (342)
T 2iuy_A 216 PIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG 274 (342)
T ss_dssp ECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT
T ss_pred EeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC
Confidence 9999999999999999999999999 899999999999999999999863
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-32 Score=256.22 Aligned_cols=287 Identities=14% Similarity=0.034 Sum_probs=197.7
Q ss_pred ceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccccccC
Q 016535 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (388)
Q Consensus 35 ~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 114 (388)
|||+++.|....+||+++++.+++++|.++ + +|++++.... +.........+.......+ .
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~--~V~v~~~~~~--------------g~~~~~~~~~~~~~~~~~~--~ 61 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-H--EVIVFGIHAF--------------GRSVHANIEEFDAQTAEHV--R 61 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-S--EEEEEEESCC--------------SCCSCSSSEEEEHHHHHHH--T
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-C--CeEEEeecCC--------------CcccccccccCCccccccc--c
Confidence 799999988877789999999999999998 4 5555554321 0000000000000000000 0
Q ss_pred CCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc-hhhhcC----CeEEEEEeccccchhhhhhhhcCCcccc
Q 016535 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFG----CRVICYTHYPTISLDMISRVREGSSMYN 189 (388)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~-~~~~~~----~~~i~~~h~p~~~~~~~~~~~~~~~~~~ 189 (388)
.+....+ ......+.+.+.+||+||.+........ +....+ .+.+.+.|.....
T Consensus 62 ~~~~~~~------~~~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 120 (413)
T 3oy2_A 62 GLNEQGF------YYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKN--------------- 120 (413)
T ss_dssp TCCSTTC------CHHHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBS---------------
T ss_pred ccccccc------hHHHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchh---------------
Confidence 0000000 0112233456779999977633221112 223333 3344555532100
Q ss_pred CCccccccchhhhhhhHHHHHHHHHHHHHhccCC--EEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCC--CCC
Q 016535 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP--LER 265 (388)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~--~~~ 265 (388)
. .. . .++.++.+| .++++|+..++.+.+. +.+.++.++|||+|.+.+.... ...
T Consensus 121 -------~--~~----~--------~~~~~~~~~~~~ii~~S~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~ 178 (413)
T 3oy2_A 121 -------I--RE----N--------LWWIFSHPKVVGVMAMSKCWISDICNY-GCKVPINIVSHFVDTKTIYDARKLVGL 178 (413)
T ss_dssp -------C--CG----G--------GGGGGGCTTEEEEEESSTHHHHHHHHT-TCCSCEEECCCCCCCCCCTTHHHHTTC
T ss_pred -------h--HH----H--------HHHHHhccCCceEEEcCHHHHHHHHHc-CCCCceEEeCCCCCHHHHHHHHHhcCC
Confidence 0 00 0 244567778 9999999999999884 4467999999999987763211 111
Q ss_pred CC--CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc------
Q 016535 266 ST--EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN------ 337 (388)
Q Consensus 266 ~~--~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~------ 337 (388)
.. +.++++++||+.+.||++.+++|++.+.++. ++++|+++|++++....+..+.+++++++++++++
T Consensus 179 ~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~ 254 (413)
T 3oy2_A 179 SEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKY----PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254 (413)
T ss_dssp GGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHC----TTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTT
T ss_pred CcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhC----CCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccc
Confidence 12 5689999999999999999999999998885 89999999998765433345689999999999887
Q ss_pred -EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 338 -VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 338 -V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+.+.|+++++++.++|+.||++|+||..|+||++++|||+||+|||+++.
T Consensus 255 vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~ 305 (413)
T 3oy2_A 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAV 305 (413)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECC
T ss_pred eeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCC
Confidence 88889999999999999999999999999999999999999999999986
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=259.55 Aligned_cols=325 Identities=12% Similarity=-0.004 Sum_probs=202.8
Q ss_pred ceEEEeccccC---CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhh-----h--------hce--ec
Q 016535 35 TSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-----R--------FGV--EL 96 (388)
Q Consensus 35 ~~I~~~~p~~~---~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~-----~--------~~i--~~ 96 (388)
|||+++.+... ..||+++++.+++++|.++| |+|+|++... ......... . ..+ ..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG--VRTRTLIPGY----PAVKAAVTDPVKCFEFTDLLGEKADLLEVQ 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECC----HHHHHHCCSCEEEEEESCSSSCCEEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC--CeEEEEeccc----ccccccccccceeEEEEEecCCeEEEEEEE
Confidence 78999877542 24699999999999999999 8888888653 211111000 0 000 00
Q ss_pred CCCCeeEEeccccccccC--CCCc-----e-ehhhhhhhHHHHHHHHH----hhcCCcEEEecCCcccccc-h-hhh--c
Q 016535 97 LHPPKVVHLYRRKWIEES--TYPR-----F-TMIGQSFGSVYLSWEAL----CKFTPLYYFDTSGYAFTYP-L-ARI--F 160 (388)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~--~~~~-----~-~~~~~~~~~~~~~~~~l----~~~~~Div~~~~~~~~~~~-~-~~~--~ 160 (388)
..++.++.++...+..+. .+.. + ..............+++ ++.+||+||.+.......+ + .+. .
T Consensus 75 ~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~ 154 (485)
T 1rzu_A 75 HERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETP 154 (485)
T ss_dssp ETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSC
T ss_pred ecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccC
Confidence 133444444322111110 1100 0 00000000111112222 3668999987653222222 2 233 7
Q ss_pred CCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-
Q 016535 161 GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL- 239 (388)
Q Consensus 161 ~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~- 239 (388)
++|+++++|............... ..+.. ..+.. ... ..+. ..++++..++.+|.++++|+..++.+.+.
T Consensus 155 ~~p~v~t~H~~~~~~~~~~~~~~~-~~~~~-~~~~~----~~~-~~~~--~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~ 225 (485)
T 1rzu_A 155 EIPSLLTIHNIAFQGQFGANIFSK-LALPA-HAFGM----EGI-EYYN--DVSFLKGGLQTATALSTVSPSYAEEILTAE 225 (485)
T ss_dssp CCCEEEEESCTTCCCEECGGGGGG-SCCCG-GGSST----TTT-EETT--EEEHHHHHHHHCSEEEESCHHHHHHTTSHH
T ss_pred CCCEEEEecCccccCCCCHHHHhh-cCCCh-hhccc----ccc-cccc--cccHHHHHHhhcCEEEecCHhHHHHHhccc
Confidence 899999999743210000000000 00000 00000 000 0000 01135666788999999999999998764
Q ss_pred hC---------CCCceEEEcCCCCCCCCccCCCC--------------------------CCC-CCcEEEEEcccCCCCC
Q 016535 240 WG---------IPDRIKRVYPPCDTSGLQVLPLE--------------------------RST-EYPAIISVAQFRPEKA 283 (388)
Q Consensus 240 ~~---------~~~~~~vi~ngvd~~~~~~~~~~--------------------------~~~-~~~~il~vgrl~~~Kg 283 (388)
++ ...++.++|||+|.+.+.+.... ... +..+++|+||+.++||
T Consensus 226 ~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg 305 (485)
T 1rzu_A 226 FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKG 305 (485)
T ss_dssp HHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTT
T ss_pred cCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccC
Confidence 32 24689999999998877653211 011 2468999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHHhCcEEEEc
Q 016535 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRDLVKLLGGAVVGIHS 362 (388)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~v~~~~l~~~~~~adv~v~p 362 (388)
++.+++|++.+.+. +++|+++|+| +.++.+.+++++++++ ++|. |.|. +++++.++|+.||++|+|
T Consensus 306 ~~~li~a~~~l~~~------~~~l~ivG~g----~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~p 372 (485)
T 1rzu_A 306 IDLMAEAVDEIVSL------GGRLVVLGAG----DVALEGALLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAIIIP 372 (485)
T ss_dssp HHHHHTTHHHHHHT------TCEEEEEECB----CHHHHHHHHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHHhc------CceEEEEeCC----chHHHHHHHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEEEC
Confidence 99999999999653 8999999987 4445678899998875 6897 6787 788889999999999999
Q ss_pred CCCCCCChHHHHHHHhCCceEeeCC
Q 016535 363 MIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 363 s~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
|.+|+||++++|||+||+|||+++.
T Consensus 373 S~~E~~~~~~lEAma~G~PvI~s~~ 397 (485)
T 1rzu_A 373 SRFEPCGLTQLYALRYGCIPVVART 397 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESS
T ss_pred cccCCCCHHHHHHHHCCCCEEEeCC
Confidence 9999999999999999999999985
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-31 Score=254.16 Aligned_cols=325 Identities=15% Similarity=0.061 Sum_probs=203.9
Q ss_pred ceEEEeccccC---CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhh--------hc--eec----C
Q 016535 35 TSVAFFHPNTN---DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDR--------FG--VEL----L 97 (388)
Q Consensus 35 ~~I~~~~p~~~---~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~--------~~--i~~----~ 97 (388)
|||+++.+... ..||+++++.+++++|.++| |+|++++... .......... ++ ..+ .
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG--VDARVLLPAF----PDIRRGVTDAQVVSRRDTFAGHITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT--CEEEEEEECC----HHHHHHCTTCEEEEEECCTTCCEEEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC--CEEEEEecCc----cccccccccceeEEEecccCCcEEEEEEEE
Confidence 78999877542 24699999999999999999 8888888753 2111111000 00 001 1
Q ss_pred CCCeeEEeccccccccC--CCCc-----e-ehhhhhhhHHHHHHHHHh----hcCCcEEEecCCcccccc--hh-hhcCC
Q 016535 98 HPPKVVHLYRRKWIEES--TYPR-----F-TMIGQSFGSVYLSWEALC----KFTPLYYFDTSGYAFTYP--LA-RIFGC 162 (388)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~-----~-~~~~~~~~~~~~~~~~l~----~~~~Div~~~~~~~~~~~--~~-~~~~~ 162 (388)
+++.++++....+..+. .+.. + ..............++++ +.+||+||.+.......+ ++ +..++
T Consensus 75 ~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~ 154 (485)
T 2qzs_A 75 NGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPA 154 (485)
T ss_dssp TTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSS
T ss_pred CCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCC
Confidence 34444444321111111 0100 0 000000001111223333 268999987764332223 23 45689
Q ss_pred eEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHH-hC
Q 016535 163 RVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WG 241 (388)
Q Consensus 163 ~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~-~~ 241 (388)
|+++++|............... ..... ..+.. ... ..+. ..++++..++.+|.++++|+..++.+.+. ++
T Consensus 155 p~v~t~H~~~~~~~~~~~~~~~-~~~~~-~~~~~----~~~-~~~~--~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~ 225 (485)
T 2qzs_A 155 KSVFTVHNLAYQGMFYAHHMND-IQLPW-SFFNI----HGL-EFNG--QISFLKAGLYYADHITAVSPTYAREITEPQFA 225 (485)
T ss_dssp EEEEEESCTTCCCEEEGGGGGT-TTCCG-GGCST----TTT-EETT--EEEHHHHHHHHCSEEEESSHHHHHHTTSHHHH
T ss_pred CEEEEecCccccCCCCHHHHHh-cCCCc-hhccc----ccc-cccc--cccHHHHHHHhcCeEEecCHHHHHHHhccccC
Confidence 9999999743211000000000 00000 00000 000 0000 01235666778999999999999998764 33
Q ss_pred C---------C--CceEEEcCCCCCCCCccCCCC----------------------------CCCCCcEEEEEcccCCCC
Q 016535 242 I---------P--DRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEK 282 (388)
Q Consensus 242 ~---------~--~~~~vi~ngvd~~~~~~~~~~----------------------------~~~~~~~il~vgrl~~~K 282 (388)
. . .++.++|||+|.+.+.+.... ...+..+++++||+.++|
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~K 305 (485)
T 2qzs_A 226 YGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQK 305 (485)
T ss_dssp TTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGG
T ss_pred cchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCcccc
Confidence 1 1 689999999998877653211 001558999999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE-EccCCCHHHHHHHHHhCcEEEE
Q 016535 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRDLVKLLGGAVVGIH 361 (388)
Q Consensus 283 g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~-~~g~v~~~~l~~~~~~adv~v~ 361 (388)
|++.+++|++.+.+. +++|+++|.| +.++.+.+++++++++ ++|. |.|. +++++.++|+.||++|+
T Consensus 306 g~~~li~a~~~l~~~------~~~l~ivG~g----~~~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~ 372 (485)
T 2qzs_A 306 GLDLVLEALPGLLEQ------GGQLALLGAG----DPVLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVILV 372 (485)
T ss_dssp CHHHHHHHHHHHHHT------TCEEEEEEEE----CHHHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHhhC------CcEEEEEeCC----chHHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEEEE
Confidence 999999999999653 8999999986 3356678999999886 6886 7887 78888999999999999
Q ss_pred cCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 362 SMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 362 ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
||.+|+||++++|||+||+|||+++.
T Consensus 373 pS~~E~~g~~~lEAma~G~PvI~s~~ 398 (485)
T 2qzs_A 373 PSRFEPCGLTQLYGLKYGTLPLVRRT 398 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESS
T ss_pred CCccCCCcHHHHHHHHCCCCEEECCC
Confidence 99999999999999999999999985
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-30 Score=250.72 Aligned_cols=163 Identities=13% Similarity=0.033 Sum_probs=136.9
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCC---------CCceEEEcCCCCCCCCccCCCC--------------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI---------PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~---------~~~~~vi~ngvd~~~~~~~~~~-------------------- 264 (388)
+.+..+..||.|+++|++.++++.+.++. ..++.+|+||+|.+.+.+....
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~ 313 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKE 313 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHH
Confidence 46777788999999999999998765432 3579999999999887653210
Q ss_pred ---------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC
Q 016535 265 ---------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD 335 (388)
Q Consensus 265 ---------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~ 335 (388)
..++.+.|+++||+.++||++.+++|++++.++ +.+++++|.| +.++...+++...+++
T Consensus 314 ~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~------~~~l~l~G~G----~~~~~~~~~~~~~~~~-- 381 (536)
T 3vue_A 314 ALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE------DVQIVLLGTG----KKKFEKLLKSMEEKYP-- 381 (536)
T ss_dssp HHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS------SCEEEEECCB----CHHHHHHHHHHHHHST--
T ss_pred HHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh------CCeEEEEecc----CchHHHHHHHHHhhcC--
Confidence 113457999999999999999999999999654 7899999988 5555667777766654
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+++.+.+..+.+++..+|+.||++|+||.+|+||++++|||+||+|||+++.+
T Consensus 382 ~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g 434 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG 434 (536)
T ss_dssp TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT
T ss_pred CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC
Confidence 67999999999999999999999999999999999999999999999999874
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=239.25 Aligned_cols=287 Identities=14% Similarity=0.097 Sum_probs=184.0
Q ss_pred ccCccceEEEeccccCCC--CChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc
Q 016535 30 RRNRTTSVAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (388)
Q Consensus 30 ~~~~~~~I~~~~p~~~~g--GG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 107 (388)
..+++|||+++.|....+ .|+++.+.+++++|.++| |+|++++..... +. +.. .. +. ......+..
T Consensus 42 ~~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G--heV~Vvt~~~~~--~~--~~~-~~----~~-~~~~~~~~~ 109 (413)
T 2x0d_A 42 SSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK--FKKRIILTDATP--NP--KDL-QS----FK-SFKYVMPEE 109 (413)
T ss_dssp CCCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT--CEEEEEESSCCC--CH--HHH-GG----GT-TSEECCTTC
T ss_pred CCCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC--CceEEEEecCCC--Ch--HHH-Hh----hh-ccceeeccC
Confidence 356889999999887654 266677899999999999 889999876421 11 111 10 10 000000000
Q ss_pred ccccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccchhhh----------cCCeEEEEEeccccchhh
Q 016535 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI----------FGCRVICYTHYPTISLDM 177 (388)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~----------~~~~~i~~~h~p~~~~~~ 177 (388)
.... ..+...+...+. ..+...++|++|.+.... ....... .+.+.+.++|.... ..
T Consensus 110 ~~~~----~~~i~~~~~~~~------~~~~~~~~Dvv~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 176 (413)
T 2x0d_A 110 DKDF----ALQIVPFNDRYN------RTIPVAKHDIFIATAWWT-AYAAQRIVSWQSDTYGIPPNKILYIIQDFEP--GF 176 (413)
T ss_dssp CCCC----SEEEEECSCCTT------CCEEECTTEEEEECSHHH-HHHHHHHHHHHHHHHTCCCCCEEEEECSCGG--GG
T ss_pred Cccc----cceeeecccccc------ccccCCCCCEEEEehHHH-HHHHHHhhhhhhhhcccccCcEEEEEeechh--hc
Confidence 0000 000000000000 001123699998775321 1111112 24566666654210 00
Q ss_pred hhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCC--EEEECChhHHHHHHHHhCCCCceEEEcCCCCC
Q 016535 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDT 255 (388)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~--~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~ 255 (388)
.... . ...+.+..++.++ .++++|+++++.+.+..-...++.+++||+|.
T Consensus 177 ----------------------~~~~--~----~~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~ 228 (413)
T 2x0d_A 177 ----------------------YQWS--S----QYVLAESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINT 228 (413)
T ss_dssp ----------------------SCSS--H----HHHHHHHTTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCH
T ss_pred ----------------------CccC--h----HHHHHHHHhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCc
Confidence 0000 0 0123455566555 58999999999998762212568899999986
Q ss_pred CCCccCCCCCCCCCcEEEEEccc-CCCCChHHHHHHHHHHHHHhcCCCCC---cEEEEEeCCCCCccHHHHHHHHHHHHh
Q 016535 256 SGLQVLPLERSTEYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPR---PRLQFVGSCRNKSDEERLQSLKDKSIE 331 (388)
Q Consensus 256 ~~~~~~~~~~~~~~~~il~vgrl-~~~Kg~~~ll~a~~~l~~~~~~~~~~---~~l~ivG~~~~~~~~~~~~~l~~~~~~ 331 (388)
+.+.+... ...++..++++||+ .+.||++.+++|++.+.++. |+ ++|+++|+++.. ++
T Consensus 229 ~~~~~~~~-~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~----~~~~~~~l~ivG~~~~~-------------~~ 290 (413)
T 2x0d_A 229 TLKNYIND-KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKY----DRSNEWKIISVGEKHKD-------------IA 290 (413)
T ss_dssp HHHTTTTS-CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHC----TTGGGCEEEEEESCCCC-------------EE
T ss_pred hhhccccc-ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhC----CCCCceEEEEEcCCchh-------------hh
Confidence 64433211 12344678899997 58899999999999998775 54 899999987543 24
Q ss_pred cCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 332 ~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+|+|.++.+|+.++|+.||++|+||..|+||++++||||||+|||+++.
T Consensus 291 l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~ 346 (413)
T 2x0d_A 291 LGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKY 346 (413)
T ss_dssp EETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECB
T ss_pred cCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCC
Confidence 56668999999999999999999999999999999999999999999999999653
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=228.42 Aligned_cols=191 Identities=14% Similarity=0.084 Sum_probs=145.3
Q ss_pred CCcEEEecCCccccc-chhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHH
Q 016535 140 TPLYYFDTSGYAFTY-PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV 218 (388)
Q Consensus 140 ~~Div~~~~~~~~~~-~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (388)
++|+||...+....+ .+++..++|.+++.|..+..... . ......++++..
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----------------------~-----~~~~~~~~~~~~ 175 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTI-----------------------N-----VASYIEREFDRV 175 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHHCTTSEEEEEESSCHHHH-----------------------T-----CCHHHHHHHHHH
T ss_pred CCCEEEECCchHHHHHHHHHHhCCCEEEEEeccchhhcc-----------------------c-----ccHHHHHHHHHH
Confidence 689888444422211 24556789999988864320000 0 011223457788
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHh
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~ 298 (388)
++.+|.++++|+..++.+.+.+ ++.++|||+|.+.|.+.......+...++|+||+.++||+ ++.+.++.
T Consensus 176 ~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~ 245 (406)
T 2hy7_A 176 APTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAF 245 (406)
T ss_dssp GGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHC
T ss_pred HHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhC
Confidence 8999999999999998876542 8999999999887754332222233789999999999999 34444443
Q ss_pred cCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHH--
Q 016535 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYM-- 376 (388)
Q Consensus 299 ~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAm-- 376 (388)
++++|+++|+|+ ++++++.++|+|+|+++++++.++|++||++|+||..|+||++++|||
T Consensus 246 ----~~~~l~ivG~g~--------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~K 307 (406)
T 2hy7_A 246 ----PQVTFHVIGSGM--------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMK 307 (406)
T ss_dssp ----TTEEEEEESCSS--------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHH
T ss_pred ----CCeEEEEEeCch--------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHH
Confidence 799999999763 556678889999999999999999999999999999999999999999
Q ss_pred -----HhCCceEeeC
Q 016535 377 -----AAGAIPIGKH 386 (388)
Q Consensus 377 -----a~G~PVI~~~ 386 (388)
|||+|||+||
T Consensus 308 l~eYla~G~PVIas~ 322 (406)
T 2hy7_A 308 LLQYDFFGLPAVCPN 322 (406)
T ss_dssp HHHHHHHTCCEEEEG
T ss_pred HHHHhhCCCcEEEeh
Confidence 9999999997
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=218.93 Aligned_cols=267 Identities=11% Similarity=0.044 Sum_probs=181.2
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHH--HhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccc
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKA--IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~--L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 108 (388)
++++|||+++.+....+ |+++++.++++. +.+.| ++|++++.... ..+....+.... . .+..+.
T Consensus 202 ~~~~~rI~~~~~~~~~~-g~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~-~~~~~~~~~~~~-~-------~~~~~~-- 267 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAH-PTGLLTVALFEALQRRQPD--LQMHLFATSGD-DGSTLRTRLAQA-S-------TLHDVT-- 267 (568)
T ss_dssp SSSCEEEEEEESCSSSS-HHHHHHHHHHHHHHHHCTT--EEEEEEESSCC-CSCHHHHHHHHT-S-------EEEECT--
T ss_pred CCCCeEEEEECcccccC-hHHHHHHHHHhhccCCccc--EEEEEEECCCC-CccHHHHHHHhc-C-------eEEECC--
Confidence 46889999999988766 899999999999 78888 89999986531 112222222211 1 111110
Q ss_pred cccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccc--cchhhhcCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFT--YPLARIFGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~--~~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
. +. .....+.+++.+||+||...++... ......+..|+++..|.......
T Consensus 268 ------~---~~--------~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 320 (568)
T 2vsy_A 268 ------A---LG--------HLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTSG---------- 320 (568)
T ss_dssp ------T---CC--------HHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCCC----------
T ss_pred ------C---CC--------HHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCcccC----------
Confidence 0 00 1123345677899999876553322 12222344566665553110000
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCcc----CC
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV----LP 262 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~----~~ 262 (388)
... ..+..+|.++++|+..++ +. +++.++||..+.....+ .+
T Consensus 321 -------------~~~--------------~~~~~~d~~i~~s~~~~~-----~~--~~i~~ipn~~~~~~~~~~~~~~~ 366 (568)
T 2vsy_A 321 -------------APW--------------MDYVLGDAFALPPALEPF-----YS--EHVLRLQGAFQPSDTSRVVAEPP 366 (568)
T ss_dssp -------------CTT--------------CCEEEECTTTSCTTTGGG-----CS--SEEEECSSCSCCCCTTCCCCCCC
T ss_pred -------------CCC--------------ceEEEECCCcCCcccccC-----Cc--ceeEcCCCcCCCCCCCCCCCCCC
Confidence 000 001236777888876543 33 58889999654332110 01
Q ss_pred CCC---CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEe-CCCCCccHHHHHHHHHHHHhcCCC-Cc
Q 016535 263 LER---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG-SCRNKSDEERLQSLKDKSIELKVD-GN 337 (388)
Q Consensus 263 ~~~---~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG-~~~~~~~~~~~~~l~~~~~~~~l~-~~ 337 (388)
... .++...++++||+.+ ||++.+++|+..+.++. |+++|+++| +|+ ..+++++.++++++. ++
T Consensus 367 ~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~----~~~~l~i~G~~g~------~~~~l~~~~~~~~l~~~~ 435 (568)
T 2vsy_A 367 SRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREV----PDSVLWLLSGPGE------ADARLRAFAHAQGVDAQR 435 (568)
T ss_dssp CTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHC----TTCEEEEECCSTT------HHHHHHHHHHHTTCCGGG
T ss_pred CccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhC----CCcEEEEecCCHH------HHHHHHHHHHHcCCChhH
Confidence 100 022345779999999 99999999999998875 899999999 443 345899999999998 99
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
|+|+|+++++++.++|+.||++|+||.+ +||++++|||+||+|||+
T Consensus 436 v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 436 LVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp EEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEB
T ss_pred EEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEe
Confidence 9999999999999999999999999999 999999999999999999
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=203.10 Aligned_cols=269 Identities=11% Similarity=0.013 Sum_probs=174.8
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
.|||+++.... ||.++.+.+++++|.++| |+|++++..... . .... ...++ .+..+....+...
T Consensus 6 ~mkIl~~~~~~---gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~--~--~~~~-~~~g~------~~~~~~~~~~~~~ 69 (364)
T 1f0k_A 6 GKRLMVMAGGT---GGHVFPGLAVAHHLMAQG--WQVRWLGTADRM--E--ADLV-PKHGI------EIDFIRISGLRGK 69 (364)
T ss_dssp -CEEEEECCSS---HHHHHHHHHHHHHHHTTT--CEEEEEECTTST--H--HHHG-GGGTC------EEEECCCCCCTTC
T ss_pred CcEEEEEeCCC---ccchhHHHHHHHHHHHcC--CEEEEEecCCcc--h--hhhc-cccCC------ceEEecCCccCcC
Confidence 48999997433 589999999999999999 888888876411 1 1111 11122 2222221110000
Q ss_pred CCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCccccc--chhhhcCCeEEEEEeccccchhhhhhhhcCCccccCC
Q 016535 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY--PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (388)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~--~~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (388)
..+..+......+.......+.+.+.+||+||.+..+.... ..++..++|.+++.|....
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------------------ 131 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA------------------ 131 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC------------------
Confidence 00000011111222233344567778999998876542221 1445778999887774210
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC----CCCC
Q 016535 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERST 267 (388)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~----~~~~ 267 (388)
. +..++..+.+|.+++.|+.. ++ ++.+++||+|.+.+.+... ....
T Consensus 132 ---------~-----------~~~~~~~~~~d~v~~~~~~~-------~~---~~~~i~n~v~~~~~~~~~~~~~~~~~~ 181 (364)
T 1f0k_A 132 ---------G-----------LTNKWLAKIATKVMQAFPGA-------FP---NAEVVGNPVRTDVLALPLPQQRLAGRE 181 (364)
T ss_dssp ---------C-----------HHHHHHTTTCSEEEESSTTS-------SS---SCEECCCCCCHHHHTSCCHHHHHTTCC
T ss_pred ---------c-----------HHHHHHHHhCCEEEecChhh-------cC---CceEeCCccchhhcccchhhhhcccCC
Confidence 0 01344567799999988764 22 5778999998655432110 0112
Q ss_pred CCc-EEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcE-EEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 268 EYP-AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 268 ~~~-~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
+.. .+++.|++.+.||.+.+++|++.+.+ +++ ++++|.++ .+++++.+++++++ +|+|+|++
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~~-------~~~l~~~~~~~~~~-~v~~~g~~- 245 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKGS-------QQSVEQAYAEAGQP-QHKVTEFI- 245 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTC-------HHHHHHHHHHTTCT-TSEEESCC-
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCch-------HHHHHHHHhhcCCC-ceEEecch-
Confidence 333 55666799999999999999998832 467 56778663 14788888888874 89999999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++.++|+.||++|+||- |++++|||+||+|||+++.
T Consensus 246 -~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~ 282 (364)
T 1f0k_A 246 -DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPF 282 (364)
T ss_dssp -SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCC
T ss_pred -hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeC
Confidence 889999999999999983 8999999999999999985
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=185.87 Aligned_cols=151 Identities=12% Similarity=0.035 Sum_probs=113.2
Q ss_pred hccCCEEEECChhHHHHHHHHhCC-CCceEEEcCC-CCCCCCccCCCC-------CCCCCcEEEEEcccCCC-CChHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP-CDTSGLQVLPLE-------RSTEYPAIISVAQFRPE-KAHPLQL 288 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ng-vd~~~~~~~~~~-------~~~~~~~il~vgrl~~~-Kg~~~ll 288 (388)
.+.+|.+++.|+..++.+.+. +. +.++.+++|| +|...+.+.... ...++..++++||+.+. ||++.++
T Consensus 148 ~~~~d~ii~~s~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li 226 (375)
T 3beo_A 148 GVMADLHFSPTAKSATNLQKE-NKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMF 226 (375)
T ss_dssp HHHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHH
T ss_pred hhhhheeeCCCHHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHH
Confidence 345999999999999999775 43 4679999999 675433221100 01234567899999875 9999999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCC
Q 016535 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHF 368 (388)
Q Consensus 289 ~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~ 368 (388)
+|++.+.++. |++++++ |.++ +.++.+.++++. +..++|+|+|.++..++.++|+.||++|+||
T Consensus 227 ~a~~~l~~~~----~~~~~i~-~~g~---~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s----- 290 (375)
T 3beo_A 227 RAIKRLVDKH----EDVQVVY-PVHM---NPVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARSYLMLTDS----- 290 (375)
T ss_dssp HHHHHHHHHC----TTEEEEE-ECCS---CHHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----
T ss_pred HHHHHHHhhC----CCeEEEE-eCCC---CHHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----
Confidence 9999998875 7888655 5553 222333444432 2236899999999999999999999999999
Q ss_pred ChHHHHHHHhCCceEeeC
Q 016535 369 GISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 369 ~~~vlEAma~G~PVI~~~ 386 (388)
|.+++|||+||+|||+++
T Consensus 291 g~~~lEA~a~G~Pvi~~~ 308 (375)
T 3beo_A 291 GGVQEEAPSLGVPVLVLR 308 (375)
T ss_dssp HHHHHHHHHHTCCEEECS
T ss_pred CChHHHHHhcCCCEEEec
Confidence 677999999999999985
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=182.94 Aligned_cols=212 Identities=11% Similarity=-0.073 Sum_probs=141.3
Q ss_pred HHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 130 YLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 130 ~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
....+.+++.+||+||.+......++ .++..++|++.+.|.... .. . + . . +
T Consensus 76 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~----~~-~------~--------~---~----~ 129 (384)
T 1vgv_A 76 EGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT----GD-L------Y--------S---P----W 129 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC----SC-T------T--------S---S----T
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc----cc-c------c--------C---C----C
Confidence 33445677889999987643112222 345678898766553210 00 0 0 0 0 0
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCC-CCCCCccC--------------CCC-C-CCC
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--------------PLE-R-STE 268 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngv-d~~~~~~~--------------~~~-~-~~~ 268 (388)
.... ...+..+.+|.+++.|+..++.+.+. +. +.++.+++||+ |...+.+. ... . ..+
T Consensus 130 ~~~~---~~~~~~~~~d~ii~~s~~~~~~l~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (384)
T 1vgv_A 130 PEEA---NRTLTGHLAMYHFSPTETSRQNLLRE-NVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDK 205 (384)
T ss_dssp THHH---HHHHHHTTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTS
T ss_pred chHh---hHHHHHhhccEEEcCcHHHHHHHHHc-CCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCC
Confidence 0011 11223456999999999999999764 43 46789999995 42211110 000 1 123
Q ss_pred CcEEEEEcccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 269 YPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 269 ~~~il~vgrl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+..++++||+.+. ||++.+++|++.+.++. |+++++++++. +.++.+.+++.++. .++|.|+|.++.+
T Consensus 206 ~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~----~~~~l~i~~g~----~~~~~~~l~~~~~~---~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 206 KMILVTGHRRESFGRGFEEICHALADIATTH----QDIQIVYPVHL----NPNVREPVNRILGH---VKNVILIDPQEYL 274 (384)
T ss_dssp EEEEEECCCBSSCCHHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHHHHHTT---CTTEEEECCCCHH
T ss_pred CEEEEEeCCccccchHHHHHHHHHHHHHhhC----CCeEEEEEcCC----CHHHHHHHHHHhhc---CCCEEEeCCCCHH
Confidence 3578899999876 99999999999998875 78999886432 22344556655432 3689999999989
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
++.++|+.||++|+|| |.+++|||+||+|||+++.
T Consensus 275 ~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~ 309 (384)
T 1vgv_A 275 PFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRD 309 (384)
T ss_dssp HHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESS
T ss_pred HHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccC
Confidence 9999999999999999 4458999999999999974
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=186.86 Aligned_cols=244 Identities=14% Similarity=0.074 Sum_probs=155.1
Q ss_pred cCCcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHH
Q 016535 139 FTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMY 215 (388)
Q Consensus 139 ~~~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (388)
.+||++|++.+.....+ +.+ ..+++.++++|.......+.. ......|.....+ ..+. ...+.-++ ....++
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lag--qg~~~~y~~L~~~-~~d~-ea~~~~i~-~~~~~E 254 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCA--SGSFDFYNCLESV-DVDH-EAGRFGIY-HRYCIE 254 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTS--SSCSCHHHHGGGC-CHHH-HHHHTTCH-HHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhh--cCCCchhhhhhhc-CCCh-hhhhhchh-HHHHHH
Confidence 45899988876554444 333 457999999997542111100 0000000000000 0000 00000011 123468
Q ss_pred HHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCC------------------------CCC-CCCc
Q 016535 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------------------------ERS-TEYP 270 (388)
Q Consensus 216 ~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~------------------------~~~-~~~~ 270 (388)
+.....||.++|+|+..+++++..++.+... +|+||+|.+.+.+... ... .+..
T Consensus 255 Kaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~-iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~l 333 (725)
T 3nb0_A 255 RAAAHSADVFTTVSQITAFEAEHLLKRKPDG-ILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTL 333 (725)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHHTSSCCSE-ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEE
T ss_pred HHHHHhCCEEEECCHHHHHHHHHHhcCCCCE-EEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCcee
Confidence 8888999999999999999999887665444 4999999988865300 111 2335
Q ss_pred EEEEEcccC-CCCChHHHHHHHHHHHHHhc---CCCCCcEEEEEeCCCCCcc----------------------------
Q 016535 271 AIISVAQFR-PEKAHPLQLEAFSVALRKLD---ADLPRPRLQFVGSCRNKSD---------------------------- 318 (388)
Q Consensus 271 ~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~---~~~~~~~l~ivG~~~~~~~---------------------------- 318 (388)
++..+||+. ..||+|.+++|+.++....+ .+..-+.|+++..+....+
T Consensus 334 iifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 413 (725)
T 3nb0_A 334 YFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRI 413 (725)
T ss_dssp EEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHH
Confidence 666689999 68999999999999976532 1123377777776632211
Q ss_pred -------------------H------------------------------------HHHHHHHHHHHhcCCCCc------
Q 016535 319 -------------------E------------------------------------ERLQSLKDKSIELKVDGN------ 337 (388)
Q Consensus 319 -------------------~------------------------------------~~~~~l~~~~~~~~l~~~------ 337 (388)
. +..+.+...++++++.++
T Consensus 414 ~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVK 493 (725)
T 3nb0_A 414 FDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVK 493 (725)
T ss_dssp HHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEE
T ss_pred HHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCcee
Confidence 0 011223334455565544
Q ss_pred EEEc-cCCCHH------HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 338 VEFY-KNLLYR------DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 338 V~~~-g~v~~~------~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
|.|. ++++.+ ++.++|+.||++|+||.+|+||++++||||||+|||++|.+
T Consensus 494 VIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 494 MIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp EEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred EEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 4555 777765 58999999999999999999999999999999999999863
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-20 Score=175.57 Aligned_cols=152 Identities=13% Similarity=0.050 Sum_probs=118.0
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
.++.++.+|.+++.|+..++.+.+. +.+ ++.+++|+. +.... + ....+..++++.|+ ..||++.+++|++.
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~~-~---~~~l~~~vi~~~~~--~~k~~~~ll~A~~~ 218 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQKG-K---GIKLKGEFIVAGSI--HTGEVEIILKAFKE 218 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCCC-S---CCCCSSCEEEEEEE--CGGGHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCcC-h---hhhhcCCEEEEEeC--CCchHHHHHHHHHH
Confidence 5566788999999999999999875 545 899999973 21111 1 11111245666665 46899999999999
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC--------CcEEEccCCCHHHHHHHHHhCcEEEEcCC-
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------GNVEFYKNLLYRDLVKLLGGAVVGIHSMI- 364 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--------~~V~~~g~v~~~~l~~~~~~adv~v~ps~- 364 (388)
+.++. |+++|+++|+++++ .++++++++++++. ++|.+.|.. +|+.++|+.||++++||.
T Consensus 219 l~~~~----p~~~lvivG~g~~~-----~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~ 287 (374)
T 2xci_A 219 IKKTY----SSLKLILVPRHIEN-----AKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTF 287 (374)
T ss_dssp HHTTC----TTCEEEEEESSGGG-----HHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSS
T ss_pred HHhhC----CCcEEEEECCCHHH-----HHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcc
Confidence 98775 89999999986543 23788888888886 578888876 899999999999888765
Q ss_pred CCCCChHHHHHHHhCCceEee
Q 016535 365 DEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 365 ~E~~~~~vlEAma~G~PVI~~ 385 (388)
.|++|++++||||||+|||++
T Consensus 288 ~e~gg~~~lEAmA~G~PVI~~ 308 (374)
T 2xci_A 288 VNIGGHNLLEPTCWGIPVIYG 308 (374)
T ss_dssp SSSCCCCCHHHHTTTCCEEEC
T ss_pred cCCCCcCHHHHHHhCCCEEEC
Confidence 477899999999999999974
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=166.91 Aligned_cols=128 Identities=22% Similarity=0.211 Sum_probs=107.8
Q ss_pred EcCCCCCCCCc--cCCC-----CC-------CCCCcEEEEEcccC-CCCChHHHHHHHHHHH--HHhcCCCCCcEEEEEe
Q 016535 249 VYPPCDTSGLQ--VLPL-----ER-------STEYPAIISVAQFR-PEKAHPLQLEAFSVAL--RKLDADLPRPRLQFVG 311 (388)
Q Consensus 249 i~ngvd~~~~~--~~~~-----~~-------~~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~--~~~~~~~~~~~l~ivG 311 (388)
||||+|.+.|. +... .. ..+..+++|+|++. +.||++.+++|++.+. ++. ++++|+++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~----~~~~l~i~G 77 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF----QEMRFIIIG 77 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG----GGEEEEEEC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccC----CCeEEEEEC
Confidence 79999999887 5431 00 02446899999999 9999999999999996 554 799999999
Q ss_pred CCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 312 SCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~l~~~V~~-~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.+ +.++.+.+++.+++++ +|+| +|+++++++.++|+.||++|+||..|++|++++|||+||+|||+++.
T Consensus 78 ~~----~~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 147 (200)
T 2bfw_A 78 KG----DPELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV 147 (200)
T ss_dssp CB----CHHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC
T ss_pred CC----ChHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC
Confidence 86 3335668888888886 8999 99999999999999999999999999999999999999999999985
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-21 Score=184.56 Aligned_cols=145 Identities=14% Similarity=0.148 Sum_probs=108.6
Q ss_pred CCceEEEcCCCCCCCCccCCCC--C---------CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 016535 243 PDRIKRVYPPCDTSGLQVLPLE--R---------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG 311 (388)
Q Consensus 243 ~~~~~vi~ngvd~~~~~~~~~~--~---------~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG 311 (388)
..++.++|||+|++.|.+.... . -.++.+|+++||+++.||++.+++|++.+.++++....+++|+++|
T Consensus 218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG 297 (482)
T 1uqt_A 218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIA 297 (482)
T ss_dssp EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEEC
T ss_pred EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEE
Confidence 3578899999998766432100 0 0245889999999999999999999999988863222358899999
Q ss_pred CCCCCccH---HHHHHHHHHHHhcC----CC--CcEE-EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC-
Q 016535 312 SCRNKSDE---ERLQSLKDKSIELK----VD--GNVE-FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA- 380 (388)
Q Consensus 312 ~~~~~~~~---~~~~~l~~~~~~~~----l~--~~V~-~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~- 380 (388)
.+...+.. ++.+++++++++++ .. ..|. +.|.++++++.++|+.||++|+||..||||++++||||||+
T Consensus 298 ~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~ 377 (482)
T 1uqt_A 298 PTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP 377 (482)
T ss_dssp CBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC
Confidence 74322111 23455555555432 11 1366 57999999999999999999999999999999999999997
Q ss_pred ----ceEeeCC
Q 016535 381 ----IPIGKHF 387 (388)
Q Consensus 381 ----PVI~~~~ 387 (388)
|+|+|+.
T Consensus 378 ~~~gpvV~S~~ 388 (482)
T 1uqt_A 378 ANPGVLVLSQF 388 (482)
T ss_dssp TSCCEEEEETT
T ss_pred CCCCCEEEECC
Confidence 8999874
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-20 Score=174.00 Aligned_cols=218 Identities=13% Similarity=-0.010 Sum_probs=150.2
Q ss_pred CcEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHH
Q 016535 141 PLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (388)
Q Consensus 141 ~Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (388)
.|+|+.+.-+...+| +.+ ....++.+++|.|....+.+..+.. ..++ -...
T Consensus 150 ~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~----------------------~~r~----ell~ 203 (496)
T 3t5t_A 150 DPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK----------------------EIRT----GILH 203 (496)
T ss_dssp SCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCH----------------------HHHH----HHHH
T ss_pred CCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcH----------------------hHHH----HHHH
Confidence 467755544444445 433 3578999999998866655432110 0001 1223
Q ss_pred HhccCCEEEECChhHHHHHHH----Hh-CC--------------CCceEEEcCCCCCCCCccCCCC--CC-----CCCcE
Q 016535 218 VGSCADLAMVNSSWTQSHIEK----LW-GI--------------PDRIKRVYPPCDTSGLQVLPLE--RS-----TEYPA 271 (388)
Q Consensus 218 ~~~~a~~ii~~S~~~~~~l~~----~~-~~--------------~~~~~vi~ngvd~~~~~~~~~~--~~-----~~~~~ 271 (388)
.+-.+|.|...++.-.+.|.+ .. +. ..++.++|+|+|++.|.+.... .. .++.+
T Consensus 204 gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~l 283 (496)
T 3t5t_A 204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRL 283 (496)
T ss_dssp HHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEE
T ss_pred HHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceE
Confidence 346789999999888777543 22 21 2367889999999888654321 11 35688
Q ss_pred EEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCcc---HHHHHHHHHHHHhc----CCCCcEEEccCC
Q 016535 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD---EERLQSLKDKSIEL----KVDGNVEFYKNL 344 (388)
Q Consensus 272 il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~---~~~~~~l~~~~~~~----~l~~~V~~~g~v 344 (388)
|+++||+++.||++.+|+|+ ++.++++... ++.|+++|.....+. .++.+++++++.+. +.. .|.|+|.+
T Consensus 284 Il~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~v 360 (496)
T 3t5t_A 284 VVHSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDNDN 360 (496)
T ss_dssp EEEEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEECC
T ss_pred EEEcccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCCC
Confidence 99999999999999999999 8888874322 567888885322111 23345555555543 222 69999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhC---CceEeeCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG---AIPIGKHF 387 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G---~PVI~~~~ 387 (388)
+.+++.++|+.||++|+||.+||||++++|||||| .|+|.|+.
T Consensus 361 ~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~ 406 (496)
T 3t5t_A 361 DVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSET 406 (496)
T ss_dssp CHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETT
T ss_pred CHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCC
Confidence 99999999999999999999999999999999996 88888864
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=159.38 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=94.3
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~ 348 (388)
++.++|+||+.+.||++.+++|++.+++. ++++|+++|.++.. +.++++++++++ ++.| |++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~------~~~~~~~~~~~~--~v~~-g~~~~~~ 67 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYK-----QDIVLLLKGKGPDE------KKIKLLAQKLGV--KAEF-GFVNSNE 67 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTG-----GGEEEEEECCSTTH------HHHHHHHHHHTC--EEEC-CCCCHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccC-----CCeEEEEEeCCccH------HHHHHHHHHcCC--eEEE-eecCHHH
Confidence 47899999999999999999999998543 69999999987543 388888998887 7999 9999999
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCC-ceEeeC
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-IPIGKH 386 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~-PVI~~~ 386 (388)
+.++|+.||++|+||..|+||++++|||+||+ |||+++
T Consensus 68 ~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~ 106 (166)
T 3qhp_A 68 LLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANS 106 (166)
T ss_dssp HHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeC
Confidence 99999999999999999999999999999998 999953
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-21 Score=159.53 Aligned_cols=107 Identities=25% Similarity=0.261 Sum_probs=98.8
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHH--hcCCCCcEEEccCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI--ELKVDGNVEFYKNL 344 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~--~~~l~~~V~~~g~v 344 (388)
.++.+++|+|++.+.||++.+++|++.+ ++++|+++|.++..+ ++++.++ +++++++|+|+|++
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i~G~~~~~~------~l~~~~~~~~~~l~~~v~~~g~~ 86 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKGD------HAERYARKIMKIAPDNVKFLGSV 86 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTTS------THHHHHHHHHHHSCTTEEEEESC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--------CCcEEEEEecCccHH------HHHHHHHhhhcccCCcEEEeCCC
Confidence 4557899999999999999999999987 689999999987665 6788888 77888999999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
+++++.++|+.||++|+||..|++|++++|||+||+|||+++.
T Consensus 87 ~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 129 (177)
T 2f9f_A 87 SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE 129 (177)
T ss_dssp CHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS
T ss_pred CHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC
Confidence 9999999999999999999999999999999999999999985
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=169.15 Aligned_cols=152 Identities=13% Similarity=0.051 Sum_probs=112.2
Q ss_pred HHhccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCC-CCCCCccC--CC--CCCCCCcEEEEEcccCCCCChHHHHHH
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--PL--ERSTEYPAIISVAQFRPEKAHPLQLEA 290 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngv-d~~~~~~~--~~--~~~~~~~~il~vgrl~~~Kg~~~ll~a 290 (388)
+..+.+|.+++.|+..++.+.+. +. +.++.+++|+. |...+... .. ....++..++++||+...||++.+++|
T Consensus 142 ~~~~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~a 220 (376)
T 1v4v_A 142 LTDVLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQA 220 (376)
T ss_dssp HHHHHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHH
T ss_pred HHHHHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHHH
Confidence 34456899999999999999775 43 46788999975 42111100 00 001234667789999888899999999
Q ss_pred HHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCC
Q 016535 291 FSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFG 369 (388)
Q Consensus 291 ~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~ 369 (388)
++.+.++. |+++++++ |.+ .+..+.++++++. .++|.|+|.++..++.++|+.||++|.|| | |
T Consensus 221 ~~~l~~~~----~~~~lv~~~g~~-----~~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g 284 (376)
T 1v4v_A 221 LKRVAEAF----PHLTFVYPVHLN-----PVVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLLVTDS--G--G 284 (376)
T ss_dssp HHHHHHHC----TTSEEEEECCSC-----HHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEEEESC--H--H
T ss_pred HHHHHhhC----CCeEEEEECCCC-----HHHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEEEECC--c--C
Confidence 99998775 78998886 642 2334566666542 36899999998889999999999999999 3 3
Q ss_pred hHHHHHHHhCCceEeeC
Q 016535 370 ISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 370 ~~vlEAma~G~PVI~~~ 386 (388)
+ ++|||+||+|||+++
T Consensus 285 ~-~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 285 L-QEEGAALGVPVVVLR 300 (376)
T ss_dssp H-HHHHHHTTCCEEECS
T ss_pred H-HHHHHHcCCCEEecc
Confidence 3 889999999999864
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-15 Score=138.36 Aligned_cols=139 Identities=12% Similarity=-0.068 Sum_probs=100.8
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCCC-CceEEEcCCCCCCCCccCCCCCCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~-~~~~vi~ngvd~~~~~~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
.|++.++.||.+++.|+.+++.+.+. +.+ .++.++++. |... +.+.....+++.++|+|+++....+.. +
T Consensus 126 ~E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~~~ki~~~~~~-~~~~--~~~~~~~~~~~~i~yaG~l~k~~~L~~----l- 196 (339)
T 3rhz_A 126 RTIAYYNKADVVVAPSQKMIDKLRDF-GMNVSKTVVQGMW-DHPT--QAPMFPAGLKREIHFPGNPERFSFVKE----W- 196 (339)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHHT-TCCCSEEEECCSC-CCCC--CCCCCCCEEEEEEEECSCTTTCGGGGG----C-
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHHc-CCCcCceeecCCC-CccC--cccccccCCCcEEEEeCCcchhhHHHh----C-
Confidence 58999999999999999999999876 443 555444332 2211 111112233478999999995322221 1
Q ss_pred HHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCC-------C
Q 016535 293 VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI-------D 365 (388)
Q Consensus 293 ~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~-------~ 365 (388)
.++++|+++|+|++. .++ ||+|+|++|.++++++|+.+|+.+.+.. .
T Consensus 197 ---------~~~~~f~ivG~G~~~----------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~ 250 (339)
T 3rhz_A 197 ---------KYDIPLKVYTWQNVE----------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQS 250 (339)
T ss_dssp ---------CCSSCEEEEESCCCC----------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHT
T ss_pred ---------CCCCeEEEEeCCccc----------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHH
Confidence 168999999998643 144 8999999999999999998888777511 1
Q ss_pred CCCChHHHHHHHhCCceEeeCC
Q 016535 366 EHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 366 E~~~~~vlEAma~G~PVI~~~~ 387 (388)
...|..++||||||+|||+++.
T Consensus 251 ~~~P~Kl~eymA~G~PVI~~~~ 272 (339)
T 3rhz_A 251 LYCSYKLGSFLAAGIPVIVQEG 272 (339)
T ss_dssp TCCCHHHHHHHHHTCCEEEETT
T ss_pred hcChHHHHHHHHcCCCEEEccC
Confidence 2568999999999999999875
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-15 Score=141.83 Aligned_cols=290 Identities=12% Similarity=0.029 Sum_probs=164.9
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEE-ecCCCCCchhHHHHhhhhhceecCCCCeeEEecccc
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY-TGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 109 (388)
+++.|||+++.-.- -|.... ..++++|++.+ ++++.++ |+.+ .....+..+.+++... +.+....
T Consensus 22 ~~~m~ki~~v~Gtr---~~~~~~-a~li~~l~~~~-~~~~~~~~tG~h----~~~~~~~~~~~~i~~~-----~~l~~~~ 87 (396)
T 3dzc_A 22 SNAMKKVLIVFGTR---PEAIKM-APLVQQLCQDN-RFVAKVCVTGQH----REMLDQVLELFSITPD-----FDLNIME 87 (396)
T ss_dssp --CCEEEEEEECSH---HHHHHH-HHHHHHHHHCT-TEEEEEEECCSS----SHHHHHHHHHTTCCCS-----EECCCCC
T ss_pred hCCCCeEEEEEecc---HhHHHH-HHHHHHHHhCC-CCcEEEEEeccc----HHHHHHHHHhcCCCCc-----eeeecCC
Confidence 36668898875332 133333 56889998862 2777544 4433 1122222233444211 1111100
Q ss_pred ccccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCc
Q 016535 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSS 186 (388)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~ 186 (388)
..-+......+......+.+.+.+||+|+........++ .++..++|++. ++.+...
T Consensus 88 -------~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs------------ 147 (396)
T 3dzc_A 88 -------PGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRT------------ 147 (396)
T ss_dssp -------TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCC------------
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccc------------
Confidence 001111122233344455678889999877655443333 44577899653 3321100
Q ss_pred cccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccC----
Q 016535 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVL---- 261 (388)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~---- 261 (388)
+. +...+ .... ......+.+|.+++.|+..++.+.+.+-.+.++.+++|+. |...+...
T Consensus 148 -~~---------~~~~~---~~~~---~r~~~~~~a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~ 211 (396)
T 3dzc_A 148 -GN---------IYSPW---PEEG---NRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHT 211 (396)
T ss_dssp -SC---------TTSST---THHH---HHHHHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHH
T ss_pred -cc---------cccCC---cHHH---HHHHHHHhcCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhccc
Confidence 00 00000 0011 1112245689999999999999987533246788999864 42111110
Q ss_pred ----------CCC--CCCCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHH
Q 016535 262 ----------PLE--RSTEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK 328 (388)
Q Consensus 262 ----------~~~--~~~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~ 328 (388)
... ...++..+++.+|.. ..|+++.+++|++.+.+++ |++++++.++. +....+.+++.
T Consensus 212 ~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~----~~~~~v~~~g~----~~~~~~~l~~~ 283 (396)
T 3dzc_A 212 DMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQH----PECQILYPVHL----NPNVREPVNKL 283 (396)
T ss_dssp CHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHHHH
T ss_pred chhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhC----CCceEEEEeCC----ChHHHHHHHHH
Confidence 011 112234455666654 4588999999999998875 78999886321 22233344443
Q ss_pred HHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 329 SIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 329 ~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
. +..++|.+.++++..++..+|+.||++|.+| | |+. +|||++|+|+|+++
T Consensus 284 ~---~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 284 L---KGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGKPVLVMR 333 (396)
T ss_dssp T---TTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTCCEEECC
T ss_pred H---cCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCCCEEEcc
Confidence 2 3446899999999889999999999999998 3 443 89999999999873
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.8e-15 Score=139.60 Aligned_cols=286 Identities=14% Similarity=0.015 Sum_probs=157.8
Q ss_pred cCccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecc---
Q 016535 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR--- 107 (388)
Q Consensus 31 ~~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--- 107 (388)
+.++|||+|+.+.. +|....+..++++|.++| |+|+++++.. . .+.....++++ ..+..
T Consensus 17 ~~~~MrIl~~~~~~---~Gh~~~~~~la~~L~~~G--heV~v~~~~~------~-~~~~~~~g~~~------~~~~~~~~ 78 (412)
T 3otg_A 17 EGRHMRVLFASLGT---HGHTYPLLPLATAARAAG--HEVTFATGEG------F-AGTLRKLGFEP------VATGMPVF 78 (412)
T ss_dssp -CCSCEEEEECCSS---HHHHGGGHHHHHHHHHTT--CEEEEEECGG------G-HHHHHHTTCEE------EECCCCHH
T ss_pred ccceeEEEEEcCCC---cccHHHHHHHHHHHHHCC--CEEEEEccHH------H-HHHHHhcCCce------eecCcccc
Confidence 55789999997443 577777889999999999 8899988652 1 11111122222 22211
Q ss_pred -------ccccccCCCC------ceehhhhhhhH------HHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEE
Q 016535 108 -------RKWIEESTYP------RFTMIGQSFGS------VYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYT 168 (388)
Q Consensus 108 -------~~~~~~~~~~------~~~~~~~~~~~------~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~ 168 (388)
.........+ .+......+.. .....+.+.+.+||+|+..........+++..++|.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~ 158 (412)
T 3otg_A 79 DGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHG 158 (412)
T ss_dssp HHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred cchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEec
Confidence 0000000000 00001111111 1233445777899998766442222225568899998877
Q ss_pred eccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHH--------hccCCEEEECChhHHHHHHHHh
Q 016535 169 HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV--------GSCADLAMVNSSWTQSHIEKLW 240 (388)
Q Consensus 169 h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~a~~ii~~S~~~~~~l~~~~ 240 (388)
|.+...... ..........++.+.. ...+|.+++.++...+...+..
T Consensus 159 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 213 (412)
T 3otg_A 159 VGRDTPDDL-------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRA 213 (412)
T ss_dssp CSCCCCSHH-------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHT
T ss_pred ccccCchhh-------------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccC
Confidence 753321110 0001111111122221 2356778888777666554432
Q ss_pred CCCCceEEEcCCCCCCC-CccC-CCCCCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC-Cc
Q 016535 241 GIPDRIKRVYPPCDTSG-LQVL-PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-KS 317 (388)
Q Consensus 241 ~~~~~~~vi~ngvd~~~-~~~~-~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~-~~ 317 (388)
.. ....+.+.+.+... .... ......++.++++.|++. .++.+.+.++++.+.+. +.++++++++.. .+
T Consensus 214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~------~~~~~~~~g~~~~~~ 285 (412)
T 3otg_A 214 RP-RRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL------DADVLVASGPSLDVS 285 (412)
T ss_dssp CT-TEEECCCCCCCCCCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS------SSEEEEECCSSCCCT
T ss_pred CC-CcceeeccCCCCCCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC------CCEEEEEECCCCChh
Confidence 21 11111222222111 1100 011223456778889986 77888888888777543 677777776543 22
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 318 ~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.++ +++++|.+.|++ ++.++|+.||++|.++ .+.+++|||++|+|+|+..
T Consensus 286 ------~l~------~~~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 286 ------GLG------EVPANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp ------TCC------CCCTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECC
T ss_pred ------hhc------cCCCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEEecC
Confidence 222 245799999998 3788999999999775 3378999999999999853
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-14 Score=135.46 Aligned_cols=269 Identities=13% Similarity=0.089 Sum_probs=154.4
Q ss_pred cceEEEeccccCCCCCh-hhH--HHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEeccccc
Q 016535 34 TTSVAFFHPNTNDGGGG-ERV--LWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~-~~~--~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (388)
+++|++. +||. +.+ +..++++|.++| ++|+.+++... ...+.....+.+ +..++..++
T Consensus 2 ~~~i~i~------~GGTgGHi~palala~~L~~~g--~~V~~vg~~~g-----~e~~~v~~~g~~------~~~i~~~~~ 62 (365)
T 3s2u_A 2 KGNVLIM------AGGTGGHVFPALACAREFQARG--YAVHWLGTPRG-----IENDLVPKAGLP------LHLIQVSGL 62 (365)
T ss_dssp -CEEEEE------CCSSHHHHHHHHHHHHHHHHTT--CEEEEEECSSS-----THHHHTGGGTCC------EEECC----
T ss_pred CCcEEEE------cCCCHHHHHHHHHHHHHHHhCC--CEEEEEECCch-----HhhchhhhcCCc------EEEEECCCc
Confidence 4567764 2332 343 467899999999 88888876531 111222222222 122221111
Q ss_pred cccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccc
Q 016535 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (388)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~ 188 (388)
-....+..+......++......+++++.+||+|+.+.++..... .++..++|+++ |.+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vi--he~n~~~------------- 127 (365)
T 3s2u_A 63 RGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVI--HEQNAVA------------- 127 (365)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEE--EECSSSC-------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEE--Eecchhh-------------
Confidence 111122223334444555566677889999999998877553222 45688999885 4322100
Q ss_pred cCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCccCCCCC---
Q 016535 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER--- 265 (388)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~~~~~~~--- 265 (388)
+. ..++..+.++.+....+.. ++...+..+..|++..+.+.......
T Consensus 128 ------------G~-----------~nr~l~~~a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~~~~~~~ 177 (365)
T 3s2u_A 128 ------------GT-----------ANRSLAPIARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAHARAPLT 177 (365)
T ss_dssp ------------CH-----------HHHHHGGGCSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTTSSCCCT
T ss_pred ------------hh-----------HHHhhccccceeeeccccc-------ccCcCcEEEECCCCchhhccchhhhcccC
Confidence 00 1233446688887765432 23345677788888755443322111
Q ss_pred CCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 266 ~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
......+++.|+.+..+..+.+.++++.+... .++.++++++.. + .+.+.+..++.+. ++.+.+++
T Consensus 178 ~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~~---~---~~~~~~~~~~~~~--~~~v~~f~- 243 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGRQ---H---AEITAERYRTVAV--EADVAPFI- 243 (365)
T ss_dssp TSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCTT---T---HHHHHHHHHHTTC--CCEEESCC-
T ss_pred CCCcEEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCcc---c---cccccceeccccc--ccccccch-
Confidence 12334556668888888888888888877444 355555444321 1 1255566666554 58888998
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+|+.++|+.||++|.-+ -+.++.|+|++|+|+|..
T Consensus 244 -~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ili 278 (365)
T 3s2u_A 244 -SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLV 278 (365)
T ss_dssp -SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEEC
T ss_pred -hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEe
Confidence 78999999999999643 368899999999998854
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-14 Score=136.15 Aligned_cols=290 Identities=11% Similarity=0.001 Sum_probs=163.0
Q ss_pred CccceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccc
Q 016535 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (388)
Q Consensus 32 ~~~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 111 (388)
.++|||+++.-.- -+.... ..++++|.+.+.++++.++.+.... ....+..+.+++... +.+....
T Consensus 25 m~~~kI~~v~Gtr---~~~~~~-a~li~~l~~~~~~~~~~~~~tG~h~---~m~~~~~~~~~i~~~-----~~l~v~~-- 90 (403)
T 3ot5_A 25 MAKIKVMSIFGTR---PEAIKM-APLVLALEKEPETFESTVVITAQHR---EMLDQVLEIFDIKPD-----IDLDIMK-- 90 (403)
T ss_dssp -CCEEEEEEECSH---HHHHHH-HHHHHHHHTCTTTEEEEEEECC--------CHHHHHHTTCCCS-----EECCCCC--
T ss_pred cccceEEEEEecC---hhHHHH-HHHHHHHHhCCCCCcEEEEEecCcH---HHHHHHHHhcCCCCC-----cccccCC--
Confidence 3457899884322 133333 5688999887312676544433211 111222233444111 1111100
Q ss_pred ccCCCCceehhhhhhhHHHHHHHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccc
Q 016535 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (388)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~ 188 (388)
..-+......+.+....+.+.+.+||+|+.......+++ .++..++|++ +++.+... +
T Consensus 91 -----~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs-------------~ 151 (403)
T 3ot5_A 91 -----KGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRT-------------W 151 (403)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCC-------------S
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCccc-------------c
Confidence 000111122233344455678889999876654333333 4457789964 33321100 0
Q ss_pred cCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCccCCC--CC
Q 016535 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPL--ER 265 (388)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~~~~~--~~ 265 (388)
. +...+. ... ..++..+.+|.+++.|+..++.+.+.+-.++++.++.|+. |...+..... ..
T Consensus 152 ~---------~~~~~p---~~~---~r~~~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~ 216 (403)
T 3ot5_A 152 N---------KYSPFP---EEM---NRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHP 216 (403)
T ss_dssp C---------TTSSTT---HHH---HHHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCH
T ss_pred c---------cccCCc---HHH---HHHHHHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchH
Confidence 0 000000 001 1222334589999999999999987643356798898853 4221111100 00
Q ss_pred -----CCCCcEEEEEcccCC-CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 016535 266 -----STEYPAIISVAQFRP-EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (388)
Q Consensus 266 -----~~~~~~il~vgrl~~-~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~ 339 (388)
..++..+++.||... .|+++.+++|+..+.+++ |++++++.+.. +....+.+++. ++..++|.
T Consensus 217 ~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~----~~~~~v~~~~~----~~~~~~~l~~~---~~~~~~v~ 285 (403)
T 3ot5_A 217 ILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESR----EDTELVYPMHL----NPAVREKAMAI---LGGHERIH 285 (403)
T ss_dssp HHHSCTTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHC----TTEEEEEECCS----CHHHHHHHHHH---HTTCTTEE
T ss_pred HHHhccCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhC----CCceEEEecCC----CHHHHHHHHHH---hCCCCCEE
Confidence 123355666777543 478999999999998875 78999987432 22222333332 23346899
Q ss_pred EccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 340 ~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+.|+++..++..+|+.||++|.+| |-..+|||++|+|+|+.
T Consensus 286 l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~ 326 (403)
T 3ot5_A 286 LIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVL 326 (403)
T ss_dssp EECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEEC
T ss_pred EeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEe
Confidence 999999899999999999999887 33448999999999987
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-12 Score=123.86 Aligned_cols=297 Identities=12% Similarity=0.023 Sum_probs=146.3
Q ss_pred cceEEEeccccCCCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecCCCCeeEEecccccccc
Q 016535 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (388)
Q Consensus 34 ~~~I~~~~p~~~~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 113 (388)
.|+|+++. . .++|..+.+..++++|.++| |+|+++++... . +... ..++ .++.++.. .+.
T Consensus 7 m~kIl~~~-~--~~~Gh~~p~~~la~~L~~~G--~~V~~~~~~~~---~---~~~~-~~g~------~~~~~~~~--~~~ 66 (430)
T 2iyf_A 7 PAHIAMFS-I--AAHGHVNPSLEVIRELVARG--HRVTYAIPPVF---A---DKVA-ATGP------RPVLYHST--LPG 66 (430)
T ss_dssp -CEEEEEC-C--SCHHHHGGGHHHHHHHHHTT--CEEEEEECGGG---H---HHHH-TTSC------EEEECCCC--SCC
T ss_pred cceEEEEe-C--CCCccccchHHHHHHHHHCC--CeEEEEeCHHH---H---HHHH-hCCC------EEEEcCCc--Ccc
Confidence 36899873 2 22466677899999999999 89999887631 1 1111 1122 22222210 000
Q ss_pred CC------CCce-ehh---hh-hhhHHHHHHHHHhhcCCcEEEecCCcccccchhhhcCCeEEEEEeccccchhhhhhhh
Q 016535 114 ST------YPRF-TMI---GQ-SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVR 182 (388)
Q Consensus 114 ~~------~~~~-~~~---~~-~~~~~~~~~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~i~~~h~p~~~~~~~~~~~ 182 (388)
.. ...+ ..+ .. .........+.+++.+||+||..........+++..++|.+.+.+.+...........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 146 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA 146 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc
Confidence 00 0000 000 00 0111222334566789998876543221222666789999887764321100000000
Q ss_pred cCCccccCCccccccchhhhhhhHHHHHHHHHHHH--------HhccCCEEEECChhHHHHHHHHhCCCCc-eEEEcCCC
Q 016535 183 EGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL--------VGSCADLAMVNSSWTQSHIEKLWGIPDR-IKRVYPPC 253 (388)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~a~~ii~~S~~~~~~l~~~~~~~~~-~~vi~ngv 253 (388)
. ..+ ...... .............+.+. ....++.+++++....+...+.+ +.+ +..+.+++
T Consensus 147 ~--~~~---~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~v~~vG~~~ 216 (430)
T 2iyf_A 147 E--PMW---REPRQT---ERGRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV--DEDVYTFVGACQ 216 (430)
T ss_dssp H--HHH---HHHHHS---HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS--CTTTEEECCCCC
T ss_pred c--chh---hhhccc---hHHHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC--CCccEEEeCCcC
Confidence 0 000 000000 00000011111111111 12246788888765443322222 234 65666555
Q ss_pred CCCCCccCCCC--CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEE-EEEeCCCCCccHHHHHHHHHHHH
Q 016535 254 DTSGLQVLPLE--RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL-QFVGSCRNKSDEERLQSLKDKSI 330 (388)
Q Consensus 254 d~~~~~~~~~~--~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l-~ivG~~~~~~~~~~~~~l~~~~~ 330 (388)
+..... ..+. ...+..+++++|++. .++.+.+.++++.+.+. +++++ +++|.+.+.+ .++
T Consensus 217 ~~~~~~-~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-----~~~~~~~~~G~~~~~~------~l~---- 279 (430)
T 2iyf_A 217 GDRAEE-GGWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-----PGWHLVLQIGRKVTPA------ELG---- 279 (430)
T ss_dssp -----C-CCCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-----TTEEEEEECC---CGG------GGC----
T ss_pred CCCCCC-CCCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-----CCeEEEEEeCCCCChH------Hhc----
Confidence 422100 0111 123446788999998 55655555555555221 46777 5678654332 221
Q ss_pred hcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 331 ELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 331 ~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.++++|.+.|++++. ++|+.||++|..+ .+.+++|||++|+|+|+..
T Consensus 280 --~~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p 326 (430)
T 2iyf_A 280 --ELPDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPMIAVP 326 (430)
T ss_dssp --SCCTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECC
T ss_pred --cCCCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCEEECC
Confidence 245799999999754 6899999999864 2378999999999999875
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-12 Score=122.78 Aligned_cols=90 Identities=9% Similarity=0.001 Sum_probs=56.5
Q ss_pred CCcEEEEEcccCCCC----------ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 268 EYPAIISVAQFRPEK----------AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 268 ~~~~il~vgrl~~~K----------g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
.+.+++++|++...| .++.++++++.+ +++++++|++.+.+ .+. .+++|
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~~~~~~~------~l~------~~~~~ 285 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---------GFEVVVAVSDKLAQ------TLQ------PLPEG 285 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---------TCEEEECCCC--------------------CCTT
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---------CCEEEEEeCCcchh------hhc------cCCCc
Confidence 457778889997655 344455544433 68899988764322 332 24689
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|.+.|+++ ..+++..||++|.. +.+.+++|||++|+|+|+.
T Consensus 286 v~~~~~~~---~~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~ 326 (398)
T 4fzr_A 286 VLAAGQFP---LSAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSV 326 (398)
T ss_dssp EEEESCCC---HHHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred EEEeCcCC---HHHHHhhCCEEEec----CCHHHHHHHHHhCCCEEec
Confidence 99999985 56789999999953 4468899999999999984
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.7e-12 Score=119.45 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=69.2
Q ss_pred CCcEEEEEcccCCCCCh-HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAH-PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~-~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
++.++++.|+....|+. ..+++++... .+. |+++++++|+++..+ .+. +++++|++.|+++.
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~----p~~~~v~~~~~~~~~------~l~------~~~~~v~~~~~~~~ 280 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TEL----PGVEAVIAVPPEHRA------LLT------DLPDNARIAESVPL 280 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS----TTEEEEEECCGGGGG------GCT------TCCTTEEECCSCCG
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccC----CCeEEEEEECCcchh------hcc------cCCCCEEEeccCCH
Confidence 34667778998765544 7777777776 553 689999998764322 221 34679999999976
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.+ ++..||++|.. +.+.+++|||++|+|+|+.
T Consensus 281 ~~---ll~~ad~~v~~----~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 281 NL---FLRTCELVICA----GGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp GG---TGGGCSEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred HH---HHhhCCEEEeC----CCHHHHHHHHHhCCCEEec
Confidence 54 56999999964 4457899999999999984
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.37 E-value=8.7e-11 Score=113.41 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=82.4
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE--EEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ--FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~--ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+++++.++ ..|..+.++++++++.++. |+-.+. ++|.+... . +.+.+.+.+.|+.+++.|.|.++.+
T Consensus 442 v~Fg~fn~--~~Ki~p~~l~~WarIL~~v----P~s~L~l~~~g~~~g~-~----~~~~~~~~~~GI~~Rv~F~g~~p~~ 510 (631)
T 3q3e_A 442 VNIGIAST--TMKLNPYFLEALKAIRDRA----KVKVHFHFALGQSNGI-T----HPYVERFIKSYLGDSATAHPHSPYH 510 (631)
T ss_dssp EEEEEEEC--STTCCHHHHHHHHHHHHHC----SSEEEEEEEESSCCGG-G----HHHHHHHHHHHHGGGEEEECCCCHH
T ss_pred EEEEECCc--cccCCHHHHHHHHHHHHhC----CCcEEEEEecCCCchh-h----HHHHHHHHHcCCCccEEEcCCCCHH
Confidence 45555565 5799999999999999986 666554 35642111 1 1334445667888899999999999
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+..+.|+.+|++|.|+.+++ |++.+|||+||+|||+..
T Consensus 511 e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~ 548 (631)
T 3q3e_A 511 QYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKT 548 (631)
T ss_dssp HHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEecc
Confidence 99999999999999997755 999999999999999964
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.9e-12 Score=119.63 Aligned_cols=94 Identities=15% Similarity=0.019 Sum_probs=69.0
Q ss_pred CCCcEEEEEcccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~-Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.++.+++++|++... ++.+.+.++++.+.+. +++++++|++++.+ .+. ++++||.+.|+++
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~------~~~~v~~~g~~~~~------~l~------~~~~~v~~~~~~~ 292 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV------DADFVLALGDLDIS------PLG------TLPRNVRAVGWTP 292 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS------SSEEEEECTTSCCG------GGC------SCCTTEEEESSCC
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC------CCEEEEEECCcChh------hhc------cCCCcEEEEccCC
Confidence 345778888998655 4666666666666432 78999998875433 222 3568999999985
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+.+++..||++|.. +.+.+++|||++|+|+|+.
T Consensus 293 ---~~~ll~~ad~~v~~----~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 293 ---LHTLLRTCTAVVHH----GGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp ---HHHHHTTCSEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred ---HHHHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEc
Confidence 45678899999964 4457899999999999983
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.3e-10 Score=105.53 Aligned_cols=93 Identities=15% Similarity=0.080 Sum_probs=60.6
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.++.++++.|+....+. +.+.++++.+. + .++++++ +|.+.+.+ .+. .++++|.+.|+++
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~-~-----~~~~~~~~~g~~~~~~------~~~------~~~~~v~~~~~~~ 290 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFA-D-----TPWHVVMAIGGFLDPA------VLG------PLPPNVEAHQWIP 290 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHT-T-----SSCEEEEECCTTSCGG------GGC------SCCTTEEEESCCC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHh-c-----CCcEEEEEeCCcCChh------hhC------CCCCcEEEecCCC
Confidence 34577888899876652 33333333332 2 2466666 45432222 221 2457999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+. ++++.||++|..+- ..+++|||++|+|+|+.
T Consensus 291 ~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~ 323 (402)
T 3ia7_A 291 FH---SVLAHARACLTHGT----TGAVLEAFAAGVPLVLV 323 (402)
T ss_dssp HH---HHHTTEEEEEECCC----HHHHHHHHHTTCCEEEC
T ss_pred HH---HHHhhCCEEEECCC----HHHHHHHHHhCCCEEEe
Confidence 64 89999999997742 36789999999999964
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.4e-10 Score=106.51 Aligned_cols=208 Identities=10% Similarity=0.003 Sum_probs=130.2
Q ss_pred HHHHHHHHhhcCCcEEEecCCcccccc--hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhH
Q 016535 129 VYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (388)
Q Consensus 129 ~~~~~~~l~~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (388)
.....+.+.+.+||+|+.......+++ .++..++|++ +++.... .+.. ......
T Consensus 83 ~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~-h~eaglr-------------s~~~----------~~pee~ 138 (385)
T 4hwg_A 83 IEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIF-HMEAGNR-------------CFDQ----------RVPEEI 138 (385)
T ss_dssp HHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEE-EESCCCC-------------CSCT----------TSTHHH
T ss_pred HHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEE-EEeCCCc-------------cccc----------cCcHHH
Confidence 334445678889998876554333333 4457889954 3432110 0000 000001
Q ss_pred HHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCCCc----c-C----CCCCCCCCcEEEEEc
Q 016535 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQ----V-L----PLERSTEYPAIISVA 276 (388)
Q Consensus 207 ~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~~~----~-~----~~~~~~~~~~il~vg 276 (388)
. .+...+.+|.+++.++..++.+.+.+-.++++.++.|+. |...+. . . ...-..++..+++.+
T Consensus 139 n-------R~~~~~~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~h 211 (385)
T 4hwg_A 139 N-------RKIIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSH 211 (385)
T ss_dssp H-------HHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEEC
T ss_pred H-------HHHHHhhhceeecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeC
Confidence 1 122234589999999999999987643356788888864 421111 0 0 001112345666677
Q ss_pred ccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc-C-C--CCcEEEccCCCHHHH
Q 016535 277 QFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-K-V--DGNVEFYKNLLYRDL 349 (388)
Q Consensus 277 rl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~-l--~~~V~~~g~v~~~~l 349 (388)
|.+ ..|+++.+++|+..+.+++ ++.+++.. .. .+++.+++. + + .++|.+.+.++..++
T Consensus 212 r~e~~~~~~~l~~ll~al~~l~~~~-----~~~vv~p~------~p----~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~ 276 (385)
T 4hwg_A 212 REENVDVKNNLKELLNSLQMLIKEY-----NFLIIFST------HP----RTKKRLEDLEGFKELGDKIRFLPAFSFTDY 276 (385)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHH-----CCEEEEEE------CH----HHHHHHHTSGGGGGTGGGEEECCCCCHHHH
T ss_pred CchhcCcHHHHHHHHHHHHHHHhcC-----CeEEEEEC------Ch----HHHHHHHHHHHHhcCCCCEEEEcCCCHHHH
Confidence 643 4478899999999997764 67777755 22 344445444 3 2 368999999998999
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
..+|+.||+++..| |.+..||+++|+|+|+.+.
T Consensus 277 ~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~ 309 (385)
T 4hwg_A 277 VKLQMNAFCILSDS-----GTITEEASILNLPALNIRE 309 (385)
T ss_dssp HHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSS
T ss_pred HHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCC
Confidence 99999999999776 4567999999999998653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.24 E-value=9.5e-10 Score=102.72 Aligned_cols=89 Identities=8% Similarity=-0.063 Sum_probs=64.3
Q ss_pred CcEEEEEcccCCC-------CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 016535 269 YPAIISVAQFRPE-------KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (388)
Q Consensus 269 ~~~il~vgrl~~~-------Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~ 341 (388)
..+++++|++... +.++.++++++.+ ++++++++++ . ..+++.. ++++|.+
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~-----~-~~~~l~~------~~~~v~~- 268 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---------DVELIVAAPD-----T-VAEALRA------EVPQARV- 268 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---------TCEEEEECCH-----H-HHHHHHH------HCTTSEE-
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---------CcEEEEEeCC-----C-CHHhhCC------CCCceEE-
Confidence 4678899999875 5566666666533 6788887642 1 1223322 3478999
Q ss_pred cCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 342 g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
|+++. .++|..||++|.. +.+.+++|||++|+|+|+..
T Consensus 269 ~~~~~---~~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~v~~p 306 (384)
T 2p6p_A 269 GWTPL---DVVAPTCDLLVHH----AGGVSTLTGLSAGVPQLLIP 306 (384)
T ss_dssp ECCCH---HHHGGGCSEEEEC----SCTTHHHHHHHTTCCEEECC
T ss_pred cCCCH---HHHHhhCCEEEeC----CcHHHHHHHHHhCCCEEEcc
Confidence 99965 4578999999986 34578999999999999874
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=5e-10 Score=105.70 Aligned_cols=93 Identities=13% Similarity=0.011 Sum_probs=60.3
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
..+.++++.|+.....+ +.+-++++.+ .+ .++++++ +|.+.+.+ .+. .+++||.+.|+++
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al-~~-----~~~~~v~~~g~~~~~~------~l~------~~~~~v~~~~~~~ 306 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAF-DG-----QPWHVVMTLGGQVDPA------ALG------DLPPNVEAHRWVP 306 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHH-TT-----SSCEEEEECTTTSCGG------GGC------CCCTTEEEESCCC
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHH-hc-----CCcEEEEEeCCCCChH------Hhc------CCCCcEEEEecCC
Confidence 34577888898865432 2222333323 22 1477777 45433222 221 2467999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+. +++..||++|..+ -..+++|||++|+|+|+.
T Consensus 307 ~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 307 HV---KVLEQATVCVTHG----GMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp HH---HHHHHEEEEEESC----CHHHHHHHHHTTCCEEEC
T ss_pred HH---HHHhhCCEEEECC----cHHHHHHHHHhCCCEEEe
Confidence 54 7899999999764 236889999999999983
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4.8e-09 Score=98.36 Aligned_cols=94 Identities=12% Similarity=-0.009 Sum_probs=61.7
Q ss_pred CCCcEEEEEcccCCCCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg-~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
....++++.|+....++ .+.+.++++.+.+ .+.++++.+.+.+.+ . ...+++|+.+.+++|
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~------~~~~~v~~~~~~~~~------~------~~~~~~~v~~~~~~p 297 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD------VDAEFVLTLGGGDLA------L------LGELPANVRVVEWIP 297 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG------SSSEEEEECCTTCCC------C------CCCCCTTEEEECCCC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc------cCceEEEEecCcccc------c------cccCCCCEEEEeecC
Confidence 34466677788775444 3444444444432 367777776554332 1 124578999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.. ++|..+|++|.- +...++.|||++|+|+|+.
T Consensus 298 ~~---~lL~~~~~~v~h----~G~~s~~Eal~~GvP~v~~ 330 (400)
T 4amg_A 298 LG---ALLETCDAIIHH----GGSGTLLTALAAGVPQCVI 330 (400)
T ss_dssp HH---HHHTTCSEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred HH---HHhhhhhheecc----CCccHHHHHHHhCCCEEEe
Confidence 65 467899998863 4456899999999999974
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.5e-08 Score=96.38 Aligned_cols=90 Identities=10% Similarity=-0.043 Sum_probs=64.2
Q ss_pred CcEEEEEcccCC-----CCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 016535 269 YPAIISVAQFRP-----EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (388)
Q Consensus 269 ~~~il~vgrl~~-----~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~ 343 (388)
..++++.|+... .|.+..++++++.+ ++++++++++...+ .+. ++++||.+.|+
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~------~l~------~~~~~v~~~~~ 326 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---------DAEIIATFDAQQLE------GVA------NIPDNVRTVGF 326 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---------SSEEEECCCTTTTS------SCS------SCCSSEEECCS
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---------CCEEEEEECCcchh------hhc------cCCCCEEEecC
Confidence 467888999875 48888888888644 68888877654322 121 34679999999
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 344 v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+++. ++|..||++|+. +.+.++.|||++|+|+|+..
T Consensus 327 ~~~~---~ll~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p 362 (441)
T 2yjn_A 327 VPMH---ALLPTCAATVHH----GGPGSWHTAAIHGVPQVILP 362 (441)
T ss_dssp CCHH---HHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECC
T ss_pred CCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEeC
Confidence 9764 568999999974 44579999999999999874
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=3.3e-08 Score=99.50 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=85.9
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCC-CcEEEccCCCHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLLYRD 348 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~V~~~g~v~~~~ 348 (388)
+++++..+ ..|=-+..++++.++.++. |+-+|++..... ...+.+++.+++.|++ ++|.|.+..+.++
T Consensus 524 v~f~~fN~--~~Ki~p~~~~~W~~IL~~v----P~S~L~Ll~~~~-----~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~ 592 (723)
T 4gyw_A 524 IVYCNFNQ--LYKIDPSTLQMWANILKRV----PNSVLWLLRFPA-----VGEPNIQQYAQNMGLPQNRIIFSPVAPKEE 592 (723)
T ss_dssp EEEECCSC--GGGCCHHHHHHHHHHHHHC----SSEEEEEEETTG-----GGHHHHHHHHHHTTCCGGGEEEEECCCHHH
T ss_pred EEEEeCCc--cccCCHHHHHHHHHHHHhC----CCCeEEEEeCcH-----HHHHHHHHHHHhcCCCcCeEEECCCCCHHH
Confidence 44444444 4677799999999999996 899999987632 2235788889999984 7799999999999
Q ss_pred HHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 349 l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
-.+.|+.+|++|-|-.+ +-+.+..||+.+|+|||+-
T Consensus 593 ~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~ 628 (723)
T 4gyw_A 593 HVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTM 628 (723)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBC
T ss_pred HHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEc
Confidence 99999999999998777 4589999999999999985
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.1e-08 Score=92.87 Aligned_cols=94 Identities=15% Similarity=-0.019 Sum_probs=62.8
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE-EEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ-FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
.+..++++.|+.. .+..+.+.++++.+.+ .+++++ ++|.+.+.+ ++ + .++++|.+.++++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~------~~~~~~~~~g~~~~~~------~~----~--~~~~~v~~~~~~~ 314 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG------LDWHVVLSVGRFVDPA------DL----G--EVPPNVEVHQWVP 314 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT------CSSEEEEECCTTSCGG------GG----C--SCCTTEEEESSCC
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc------CCcEEEEEECCcCChH------Hh----c--cCCCCeEEecCCC
Confidence 3456778889887 4444444444444422 367774 457543222 22 1 2467999999997
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+. ++|..||++|.. +-..+++|||++|+|+|+..
T Consensus 315 ~~---~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p 348 (424)
T 2iya_A 315 QL---DILTKASAFITH----AGMGSTMEALSNAVPMVAVP 348 (424)
T ss_dssp HH---HHHTTCSEEEEC----CCHHHHHHHHHTTCCEEECC
T ss_pred HH---HHHhhCCEEEEC----CchhHHHHHHHcCCCEEEec
Confidence 64 689999998874 23478999999999999864
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=6.2e-08 Score=91.06 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=64.3
Q ss_pred CCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
++.++++.|+.. +.+..+.++++++.+ ++++++.++....+ ..+.++||.+.+++|.
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---------~~~vv~~~g~~~~~-------------~~~~~~~v~~~~~~~~ 278 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---------GRRVVLSSGWAGLG-------------RIDEGDDCLVVGEVNH 278 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---------TCCEEEECTTTTCC-------------CSSCCTTEEEESSCCH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---------CCEEEEEeCCcccc-------------cccCCCCEEEecCCCH
Confidence 456788889988 666667777776654 57777776543222 1134679999999976
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+ +++..||++|..+ -..++.||+++|+|+|+.
T Consensus 279 ~---~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 279 Q---VLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp H---HHGGGSSEEEECC----CHHHHHHHHHHTCCEEEC
T ss_pred H---HHHhhCcEEEECC----cHHHHHHHHHcCCCEEEc
Confidence 4 4678999999764 226899999999999974
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.1e-08 Score=82.24 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=66.6
Q ss_pred CcEEEEEcccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 269 ~~~il~vgrl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
..++++.|++. +.|.+..++++++.+ +.++++++++...+ .++++|++.|+++
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~~~~---------------~~~~~v~~~~~~~ 77 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---------PQKVLWRFDGNKPD---------------TLGLNTRLYKWIP 77 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---------SSEEEEECCSSCCT---------------TCCTTEEEESSCC
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---------CCeEEEEECCcCcc---------------cCCCcEEEecCCC
Confidence 47788899986 556677777776533 57888887654321 2457999999998
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
++++..+ ..||++|+. +.+.+++|||++|+|+|+..
T Consensus 78 ~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p 113 (170)
T 2o6l_A 78 QNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIP 113 (170)
T ss_dssp HHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECC
T ss_pred HHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEecc
Confidence 7655432 999999974 44589999999999999875
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.7e-06 Score=80.04 Aligned_cols=88 Identities=17% Similarity=0.100 Sum_probs=61.4
Q ss_pred CcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
..++++.|+.. +.+..+.++++++.+ +.+++++ |.+... . ..+++++.+.+++|+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~--------~------~~~~~~v~~~~~~~~ 295 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---------GRRVILSRGWADLV--------L------PDDGADCFAIGEVNH 295 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---------TCCEEECTTCTTCC--------C------SSCGGGEEECSSCCH
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---------CCeEEEEeCCCccc--------c------cCCCCCEEEeCcCCh
Confidence 57788889984 777777777777655 4555555 643211 0 134578999999987
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
.+ ++.+||++|.. +-..+++|||++|+|+|+..
T Consensus 296 ~~---~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 296 QV---LFGRVAAVIHH----GGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp HH---HGGGSSEEEEC----CCHHHHHHHHHHTCCEEECC
T ss_pred HH---HHhhCCEEEeC----CChhHHHHHHHcCCCEEECC
Confidence 54 57999999975 23369999999999999863
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.6e-06 Score=84.25 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=126.0
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHH-hCC-----CCceEEEcCCCCCCCCc----cC---------C------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKL-WGI-----PDRIKRVYPPCDTSGLQ----VL---------P------------ 262 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~-~~~-----~~~~~vi~ngvd~~~~~----~~---------~------------ 262 (388)
+.+.++..++.+.++|+.-.+.+++. ++. +.++.-+-||+|+.... |. .
T Consensus 395 Ma~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~ 474 (796)
T 2c4m_A 395 MAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELK 474 (796)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGG
T ss_pred HHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHH
Confidence 35677789999999999999988741 111 56888999999876651 10 0
Q ss_pred -----CCC------------------------------CCCCcEEEEEcccCCCCChHH-HHHHHHHHHH--HhcC-CCC
Q 016535 263 -----LER------------------------------STEYPAIISVAQFRPEKAHPL-QLEAFSVALR--KLDA-DLP 303 (388)
Q Consensus 263 -----~~~------------------------------~~~~~~il~vgrl~~~Kg~~~-ll~a~~~l~~--~~~~-~~~ 303 (388)
.+. .++...++++.|+..+||+++ ++..+..+.+ +++. ...
T Consensus 475 ~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~ 554 (796)
T 2c4m_A 475 KLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIP 554 (796)
T ss_dssp GGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSC
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCC
Confidence 000 035678899999999999999 8888887764 2110 113
Q ss_pred CcEEEEEeCCCCCccHH--HHHHHHHHHH----hcCCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHH
Q 016535 304 RPRLQFVGSCRNKSDEE--RLQSLKDKSI----ELKVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVV 373 (388)
Q Consensus 304 ~~~l~ivG~~~~~~~~~--~~~~l~~~~~----~~~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vl 373 (388)
++++++.|.+.+..... ..+.+.+.++ +-.+++ +|.|+...+.+--..++.+||++++||. .|+.|++-+
T Consensus 555 p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~M 634 (796)
T 2c4m_A 555 ARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNM 634 (796)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence 69999999986553211 1112333333 224567 7999988888888889999999999998 999999999
Q ss_pred HHHHhCCceEeeC
Q 016535 374 EYMAAGAIPIGKH 386 (388)
Q Consensus 374 EAma~G~PVI~~~ 386 (388)
=+|..|++.|++-
T Consensus 635 Kam~NGaL~iGtL 647 (796)
T 2c4m_A 635 KFMMNGALTLGTM 647 (796)
T ss_dssp HHHHTTCEEEEES
T ss_pred HHHHcCCeEEecc
Confidence 9999999999873
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.50 E-value=1.2e-05 Score=75.70 Aligned_cols=87 Identities=15% Similarity=0.063 Sum_probs=60.8
Q ss_pred CcEEEEEcccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-eCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 016535 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (388)
Q Consensus 269 ~~~il~vgrl~---~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v 344 (388)
..++++.|+.. ..+..+.++++++.+ +.+++++ |.+.. + . ..+++++.+.+++
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~-~-------~------~~~~~~v~~~~~~ 294 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---------GRRVILSRGWTEL-V-------L------PDDRDDCFAIDEV 294 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---------TCCEEEECTTTTC-C-------C------SCCCTTEEEESSC
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---------CCeEEEEeCCccc-c-------c------cCCCCCEEEeccC
Confidence 46777889875 345556666666544 4566665 64321 1 0 1356799999999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|.+ ++|.+||++|.- +-..++.||+++|+|+|+.
T Consensus 295 ~~~---~ll~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~ 328 (416)
T 1rrv_A 295 NFQ---ALFRRVAAVIHH----GSAGTEHVATRAGVPQLVI 328 (416)
T ss_dssp CHH---HHGGGSSEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred ChH---HHhccCCEEEec----CChhHHHHHHHcCCCEEEc
Confidence 754 468999999983 3356999999999999985
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.8e-06 Score=85.31 Aligned_cols=173 Identities=13% Similarity=0.059 Sum_probs=124.0
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHH-----hC-CCCceEEEcCCCCCCCC----cc-----------------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKL-----WG-IPDRIKRVYPPCDTSGL----QV----------------------- 260 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~-----~~-~~~~~~vi~ngvd~~~~----~~----------------------- 260 (388)
+.+.++..++.+.++|+.-.+.+++. +. .+.++.-+-||+|.... .|
T Consensus 406 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~ 485 (796)
T 1l5w_A 406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLIN 485 (796)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGG
T ss_pred HHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHH
Confidence 45677789999999999999998641 11 15688899999975322 00
Q ss_pred ----CC-------C---------------------CCCCCCcEEEEEcccCCCCChHH-HHHHHHHHHHHhcC---CCCC
Q 016535 261 ----LP-------L---------------------ERSTEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DLPR 304 (388)
Q Consensus 261 ----~~-------~---------------------~~~~~~~~il~vgrl~~~Kg~~~-ll~a~~~l~~~~~~---~~~~ 304 (388)
.+ . ...++...++++.|+..+||+++ ++.++..+.+-..+ ...+
T Consensus 486 l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p 565 (796)
T 1l5w_A 486 LEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP 565 (796)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCC
Confidence 00 0 00045678999999999999999 88888877552111 1136
Q ss_pred cEEEEEeCCCCCccHH--HHHHHHHHHH----hcCCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHH
Q 016535 305 PRLQFVGSCRNKSDEE--RLQSLKDKSI----ELKVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (388)
Q Consensus 305 ~~l~ivG~~~~~~~~~--~~~~l~~~~~----~~~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlE 374 (388)
+++++.|.+.+..... ..+.+.+.++ +-.+++ +|.|+...+.+--..++.+||+.++||. .|+.|++-+=
T Consensus 566 ~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MK 645 (796)
T 1l5w_A 566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK 645 (796)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred eEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence 9999999986553211 1112333333 224556 7999988888888889999999999998 9999999999
Q ss_pred HHHhCCceEeeC
Q 016535 375 YMAAGAIPIGKH 386 (388)
Q Consensus 375 Ama~G~PVI~~~ 386 (388)
||..|++.|++-
T Consensus 646 am~NGaL~iGtL 657 (796)
T 1l5w_A 646 LALNGALTVGTL 657 (796)
T ss_dssp HHHTTCEEEECS
T ss_pred HHHcCCeeecCc
Confidence 999999999873
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.27 E-value=1.7e-05 Score=78.83 Aligned_cols=173 Identities=14% Similarity=0.069 Sum_probs=123.9
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHH-hCC-----CCceEEEcCCCCCCCC----ccC-------C--------------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKL-WGI-----PDRIKRVYPPCDTSGL----QVL-------P-------------- 262 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~-~~~-----~~~~~vi~ngvd~~~~----~~~-------~-------------- 262 (388)
+.+.++..++.+.++|+.-.+.+++. ++. +.++.-+-||+|+... .|. .
T Consensus 430 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~ 509 (824)
T 2gj4_A 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK 509 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred HHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHH
Confidence 35677889999999999998888631 111 5688899999987654 110 0
Q ss_pred ---CCC-------------------------------CCCCcEEEEEcccCCCCChHHH-HHHHHHHHH--HhcC-CCCC
Q 016535 263 ---LER-------------------------------STEYPAIISVAQFRPEKAHPLQ-LEAFSVALR--KLDA-DLPR 304 (388)
Q Consensus 263 ---~~~-------------------------------~~~~~~il~vgrl~~~Kg~~~l-l~a~~~l~~--~~~~-~~~~ 304 (388)
... .++...++++.|+..+||+++. +..+..+.+ ..+. ...+
T Consensus 510 L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p 589 (824)
T 2gj4_A 510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP 589 (824)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCC
Confidence 000 0355789999999999999997 788777742 2211 0126
Q ss_pred cEEEEEeCCCCCccHH--HHHHHHHHHHhc----CCCC--cEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHH
Q 016535 305 PRLQFVGSCRNKSDEE--RLQSLKDKSIEL----KVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (388)
Q Consensus 305 ~~l~ivG~~~~~~~~~--~~~~l~~~~~~~----~l~~--~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlE 374 (388)
+++++.|.+.+..... ..+.+.+.++.. .+++ +|.|+...+.+--..++.+||+.++||. .|+.|++-+=
T Consensus 590 ~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MK 669 (824)
T 2gj4_A 590 RTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMK 669 (824)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHH
T ss_pred EEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence 7999999986553211 112244444322 2356 7999988888888889999999999998 9999999999
Q ss_pred HHHhCCceEeeC
Q 016535 375 YMAAGAIPIGKH 386 (388)
Q Consensus 375 Ama~G~PVI~~~ 386 (388)
||..|++.|++-
T Consensus 670 amlNGaLtigtl 681 (824)
T 2gj4_A 670 FMLNGALTIGTM 681 (824)
T ss_dssp HHHTTCEEEECS
T ss_pred HHHcCceEEEEe
Confidence 999999999874
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00053 Score=62.55 Aligned_cols=99 Identities=14% Similarity=0.074 Sum_probs=66.0
Q ss_pred CcEEEEEcc-cCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcC--C-CCcEEEcc
Q 016535 269 YPAIISVAQ-FRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--V-DGNVEFYK 342 (388)
Q Consensus 269 ~~~il~vgr-l~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~--l-~~~V~~~g 342 (388)
+.+++..|. ..+.|... .+.++++.|.++ +++++++|+.. +.+ ..++..+..+ . ...+.+.|
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~------~~~vvl~g~~~---e~~---~~~~i~~~~~~~~~~~~~~l~g 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAK---DHE---AGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGG---GHH---HHHHHHTTSCHHHHTTEEECTT
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC------CCeEEEEeChh---hHH---HHHHHHHhhhhccccceEeccC
Confidence 355666666 55667665 788888877654 67888888643 222 2233332221 0 12346779
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 343 ~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
..+-.|+.++++.||++|... .|. +-.|.++|+|+|+
T Consensus 249 ~~sl~e~~ali~~a~l~I~~D----sg~-~HlAaa~g~P~v~ 285 (348)
T 1psw_A 249 ETQLDQAVILIAACKAIVTND----SGL-MHVAAALNRPLVA 285 (348)
T ss_dssp TSCHHHHHHHHHTSSEEEEES----SHH-HHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCEEEecC----CHH-HHHHHHcCCCEEE
Confidence 899999999999999999864 233 3349999999997
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0022 Score=58.57 Aligned_cols=98 Identities=13% Similarity=0.031 Sum_probs=66.9
Q ss_pred cEEEEEcccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 270 PAIISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
.+.+..|.-.+.|.. +...+.++.+.++ +.+++++|+.. +.+ ..++..+..+. ..+.+.|..+-.
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~------g~~vvl~g~~~---e~~---~~~~i~~~~~~-~~~~l~g~~sl~ 253 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRL------GYKTVFFGGPM---DLE---MVQPVVEQMET-KPIVATGKFQLG 253 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHH------TCEEEECCCTT---THH---HHHHHHHTCSS-CCEECTTCCCHH
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhC------CCeEEEEeCcc---hHH---HHHHHHHhccc-ccEEeeCCCCHH
Confidence 555666654556655 4677888888765 56778888643 222 33444444432 346677999999
Q ss_pred HHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
|+.++++.||++|.. ..|..-+ |.++|+|+|+-
T Consensus 254 e~~ali~~a~~~i~~----DsG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 254 PLAAAMNRCNLLITN----DSGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp HHHHHHHTCSEEEEE----SSHHHHH-HHTTTCCEEEE
T ss_pred HHHHHHHhCCEEEEC----CCCHHHH-HHhcCCCEEEE
Confidence 999999999999986 3344545 88999999973
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=5.3e-05 Score=66.92 Aligned_cols=92 Identities=13% Similarity=0.021 Sum_probs=62.7
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
.++++.|..++..-...+++++. +. .+ ..++.|.+.. ..+++++.+++. .++++.+++ +++
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~---~~-----~~-i~vv~G~~~~-----~~~~l~~~~~~~---~~v~v~~~~--~~m 219 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELP---KT-----KI-ISIATSSSNP-----NLKKLQKFAKLH---NNIRLFIDH--ENI 219 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSC---TT-----SC-EEEEECTTCT-----THHHHHHHHHTC---SSEEEEESC--SCH
T ss_pred eEEEEECCCchhhHHHHHHHHhh---cC-----CC-EEEEECCCch-----HHHHHHHHHhhC---CCEEEEeCH--HHH
Confidence 55667887655443333444433 21 23 4456676532 234677766653 489999998 899
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++|++||+.|.+ + |.++.|++++|+|.|.-
T Consensus 220 ~~~m~~aDlvI~~----g-G~T~~E~~~~g~P~i~i 250 (282)
T 3hbm_A 220 AKLMNESNKLIIS----A-SSLVNEALLLKANFKAI 250 (282)
T ss_dssp HHHHHTEEEEEEE----S-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHCCEEEEC----C-cHHHHHHHHcCCCEEEE
Confidence 9999999999984 2 57999999999998863
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.06 Score=51.02 Aligned_cols=99 Identities=10% Similarity=-0.101 Sum_probs=56.6
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~ 347 (388)
+..++++.|.....-+.+.+.+++..+.+. +.+++++-+.... ...+.+.+.... ++++.+.+++|+.
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~---~l~~~~~~~~~~---~~~~~v~~w~pq~ 343 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS------GVRFLWSNSAEKK---VFPEGFLEWMEL---EGKGMICGWAPQV 343 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH------TCEEEEECCCCGG---GSCTTHHHHHHH---HCSEEEESSCCHH
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC------CCcEEEEECCCcc---cCChhHHHhhcc---CCCEEEEccCCHH
Confidence 346666778776322334444555555433 5666655433100 000123222210 2578889999765
Q ss_pred HHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 348 DLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 348 ~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++|. ++|+||.- +-..+++||+++|+|.|+-
T Consensus 344 ---~vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~ 376 (463)
T 2acv_A 344 ---EVLAHKAIGGFVSH----CGWNSILESMWFGVPILTW 376 (463)
T ss_dssp ---HHHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred ---HHhCCCccCeEEec----CCchhHHHHHHcCCCeeec
Confidence 3576 57777764 3356899999999999974
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0044 Score=55.86 Aligned_cols=98 Identities=17% Similarity=0.137 Sum_probs=63.2
Q ss_pred CcEEEEEcccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~--~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.+++..|.-.+.|... ...+.++.+.+ .+.++++.+++ .+..+..++..+.. +++.+.|..+-
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~------~~~~vvl~~g~-----~~e~~~~~~i~~~~---~~~~l~g~~sl 244 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLAD------SGIRIKLPWGA-----PHEEERAKRLAEGF---AYVEVLPKMSL 244 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTT------TCCEEEECCSS-----HHHHHHHHHHHTTC---TTEEECCCCCH
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHH------CCCcEEEecCC-----HHHHHHHHHHHhhC---CcccccCCCCH
Confidence 35566666655667666 55555555532 36788887332 22222333433332 25678899999
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.|+.++++.||++|.. ..|..=+ |.|.|+|+|+-
T Consensus 245 ~el~ali~~a~l~I~~----DSG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 245 EGVARVLAGAKFVVSV----DTGLSHL-TAALDRPNITV 278 (326)
T ss_dssp HHHHHHHHTCSEEEEE----SSHHHHH-HHHTTCCEEEE
T ss_pred HHHHHHHHhCCEEEec----CCcHHHH-HHHcCCCEEEE
Confidence 9999999999999987 2344545 67799999873
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.05 Score=51.47 Aligned_cols=96 Identities=11% Similarity=-0.027 Sum_probs=55.8
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+..+++..|..... ..+.+.+.+..+.+. +.++++ +|... .+ ...+.+.+. .++++.+.+++|+
T Consensus 271 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~------~~~~lw~~~~~~-~~--~l~~~~~~~-----~~~~~~v~~w~pq 335 (456)
T 2c1x_A 271 TSVVYISFGTVTTP-PPAEVVALSEALEAS------RVPFIWSLRDKA-RV--HLPEGFLEK-----TRGYGMVVPWAPQ 335 (456)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH------TCCEEEECCGGG-GG--GSCTTHHHH-----HTTTEEEESCCCH
T ss_pred cceEEEecCccccC-CHHHHHHHHHHHHhc------CCeEEEEECCcc-hh--hCCHHHHhh-----cCCceEEecCCCH
Confidence 34666777877643 334444555545433 444444 44321 00 000112221 1368999999986
Q ss_pred HHHHHHHH--hCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~--~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
. ++|. ++|++|.- +-..+++||+++|+|.|+-
T Consensus 336 ~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~ 369 (456)
T 2c1x_A 336 A---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICR 369 (456)
T ss_dssp H---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred H---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEec
Confidence 4 5688 66777753 3356899999999999974
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.074 Score=50.15 Aligned_cols=98 Identities=11% Similarity=-0.042 Sum_probs=56.6
Q ss_pred CCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHH-HHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE-RLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 268 ~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~-~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
+.++++..|..... ..+.+.+.+..+.+. +.+++++-+.. ..+ ..+.+.+ + .++|+.+.+++|+
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~------~~~flw~~~~~---~~~~lp~~~~~---~--~~~~~~vv~w~Pq 337 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEEC------GFPFIWSFRGD---PKEKLPKGFLE---R--TKTKGKIVAWAPQ 337 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH------CCCEEEECCSC---HHHHSCTTHHH---H--TTTTEEEESSCCH
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhC------CCeEEEEeCCc---chhcCCHhHHh---h--cCCceEEEeeCCH
Confidence 34566677877643 344455555555443 45555543321 110 0011221 1 2468999999986
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
. +++..+++.++-+. +--.+++||+++|+|.|+-
T Consensus 338 ~---~vL~h~~v~~fvtH--~G~~S~~Eal~~GvP~i~~ 371 (454)
T 3hbf_A 338 V---EILKHSSVGVFLTH--SGWNSVLECIVGGVPMISR 371 (454)
T ss_dssp H---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEEC
T ss_pred H---HHHhhcCcCeEEec--CCcchHHHHHHcCCCEecC
Confidence 3 67889994443333 2245899999999999974
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.36 Score=45.88 Aligned_cols=43 Identities=14% Similarity=-0.127 Sum_probs=30.6
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+...+++|+. ++|+.+++-++-+. +--.+++||+++|+|+|+-
T Consensus 341 ~~v~~w~Pq~---~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 341 FVIPFWAPQA---QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp EEEESCCCHH---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEEC
T ss_pred EEEeCccCHH---HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEec
Confidence 5566799764 68888885333322 2345899999999999973
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.42 Score=47.98 Aligned_cols=143 Identities=10% Similarity=0.011 Sum_probs=82.9
Q ss_pred hccCCEEEECChhHHHHHHHHhCCC-CceEEEcCCCCC--CCCccCC-----------CCCCCCCcEEEEEcccCCCC--
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDT--SGLQVLP-----------LERSTEYPAIISVAQFRPEK-- 282 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~-~~~~vi~ngvd~--~~~~~~~-----------~~~~~~~~~il~vgrl~~~K-- 282 (388)
.+..|.+++.|+...+.+.+.++.+ .++ +.-|..- ..+.... .....++.+|+|+-.+....
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i--~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMDEERI--LEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFV 553 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCCGGGE--EESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCC
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCCcceE--EEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccc
Confidence 4667999999999999999888864 344 4445421 1111100 01124568899997665431
Q ss_pred -------ChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHh
Q 016535 283 -------AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (388)
Q Consensus 283 -------g~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~ 355 (388)
....-++.+.+ .. .++..+++-. ... +.......+.++.+.-.... .++.++|..
T Consensus 554 ~~~~~~~~~~~~~~~l~~---~l---~~~~~li~r~------Hp~----~~~~~~~~~~~~~~~~~~~~--~di~~ll~~ 615 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYK---EL---GDDYVILLRM------HYL----ISNALDLSGYENFAIDVSNY--NDVSELFLI 615 (729)
T ss_dssp GGGSSCCCCTTCHHHHHH---HH---TTTEEEEECC------CHH----HHTTCCCTTCTTTEEECTTC--SCHHHHHHT
T ss_pred cccccccchhhHHHHHHH---Hc---CCCeEEEEec------Ccc----hhccccccccCCcEEeCCCC--cCHHHHHHH
Confidence 11112233332 22 1367776654 221 11111111233444444332 588999999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 356 adv~v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
||++|- .++-+++|++..++|||-..
T Consensus 616 aD~lIT-----DySSv~fD~~~l~kPiif~~ 641 (729)
T 3l7i_A 616 SDCLIT-----DYSSVMFDYGILKRPQFFFA 641 (729)
T ss_dssp CSEEEE-----SSCTHHHHHGGGCCCEEEEC
T ss_pred hCEEEe-----echHHHHhHHhhCCCEEEec
Confidence 998775 45568999999999999763
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.087 Score=44.41 Aligned_cols=42 Identities=10% Similarity=-0.058 Sum_probs=35.6
Q ss_pred cEEEccCCCHHHHHHHHH-hCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 337 NVEFYKNLLYRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 337 ~V~~~g~v~~~~l~~~~~-~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
++...+++ +++.++|. .||++|.- +-..++.|++++|+|.|.
T Consensus 115 ~v~v~~f~--~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~Iv 157 (224)
T 2jzc_A 115 KVIGFDFS--TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIV 157 (224)
T ss_dssp EEEECCSS--SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCE
T ss_pred eEEEeecc--chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEE
Confidence 56777887 78999999 99998875 445689999999999986
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=90.28 E-value=2 Score=40.57 Aligned_cols=98 Identities=8% Similarity=-0.116 Sum_probs=56.5
Q ss_pred CcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCC--CccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN--KSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 269 ~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~--~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
.+++++.|.... ...+.+.+.+..+.+. +.+++++-+... .++....+.+.+. .++|+.+.+++|+
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~v~~~~pq 363 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANC------KKSFLWIIRPDLVIGGSVIFSSEFTNE-----IADRGLIASWCPQ 363 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHT------TCEEEEECCGGGSTTTGGGSCHHHHHH-----HTTTEEEESCCCH
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhc------CCcEEEEEcCCccccccccCcHhHHHh-----cCCCEEEEeecCH
Confidence 456667777653 2344455555555332 566666543211 0000011233222 2368999999986
Q ss_pred HHHHHHHHhCcE--EEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 347 RDLVKLLGGAVV--GIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 347 ~~l~~~~~~adv--~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
. ++|+.+++ +|.- +-..++.||+++|+|+|+-
T Consensus 364 ~---~~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 364 D---KVLNHPSIGGFLTH----CGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp H---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred H---HHhcCCCCCEEEec----CCcchHHHHHHcCCCEEec
Confidence 5 47877665 5542 3356899999999999974
|
| >3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=90.08 E-value=6.4 Score=34.42 Aligned_cols=157 Identities=11% Similarity=0.028 Sum_probs=85.7
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCCCCCCCc-cCCCCCCCCCcEEEEEcccCCCCChHHHHHHHH
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ-VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngvd~~~~~-~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~ 292 (388)
.+++.....|.|+++.....+.+.+... ++-++..+++...-. -........ ..+..+... -.+...++.+.
T Consensus 62 ~~~l~~~~~DlIiai~t~aa~a~~~~~~---~iPVVf~~v~dp~~~~l~~~~~~~g-~nvtGv~~~---~~~~~~l~l~~ 134 (302)
T 3lkv_A 62 ARQFVGENPDVLVGIATPTAQALVSATK---TIPIVFTAVTDPVGAKLVKQLEQPG-KNVTGLSDL---SPVEQHVELIK 134 (302)
T ss_dssp HHHHHTTCCSEEEEESHHHHHHHHHHCS---SSCEEEEEESCTTTTTSCSCSSSCC-SSEEEEECC---CCHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEcCCHHHHHHHhhcC---CCCeEEEecCCcchhhhcccccCCC-CcEEEEECC---cCHHHHHHHHH
Confidence 4566678899999988777777665432 222344444211110 001111112 334444332 23556666666
Q ss_pred HHHHHhcCCCCCc-EEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHH----HHhCcEEEEcCCC--
Q 016535 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL----LGGAVVGIHSMID-- 365 (388)
Q Consensus 293 ~l~~~~~~~~~~~-~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~----~~~adv~v~ps~~-- 365 (388)
++. |+. ++.++++..+.......+.+++.++++|+. +......+.+++.+. ....|++..+...
T Consensus 135 ~l~-------P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~d~~~ 205 (302)
T 3lkv_A 135 EIL-------PNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIK--LVEATALKSADVQSATQAIAEKSDVIYALIDNTV 205 (302)
T ss_dssp HHS-------TTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCE--EEEEECSSGGGHHHHHHHHHTTCSEEEECSCHHH
T ss_pred HhC-------CCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCE--EEEEecCChHHHHHHHHhccCCeeEEEEeCCcch
Confidence 662 443 455666543332334567788888888874 555554454555554 4567877776532
Q ss_pred -CCCChHHHHHHHhCCceEeeC
Q 016535 366 -EHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 366 -E~~~~~vlEAma~G~PVI~~~ 386 (388)
........-+..+++||++.+
T Consensus 206 ~~~~~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 206 ASAIEGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHTHHHHHHHHHHTTCCEEESS
T ss_pred hhHHHHHHHHHhhcCCceeecc
Confidence 122233455678899999865
|
| >3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=81.37 E-value=7.3 Score=33.97 Aligned_cols=110 Identities=8% Similarity=-0.019 Sum_probs=70.6
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC-----C
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN-----L 344 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~-----v 344 (388)
-.++-+|.-...++-..+++.+-.+... ++-++.++...... ..++.+.+++..+++|.. +|..+.- .
T Consensus 27 g~l~iiGGgedk~~~~~i~~~~v~lagg-----~~~~I~~IptAs~~-~~~~~~~~~~~f~~lG~~-~v~~L~i~~r~~a 99 (291)
T 3en0_A 27 PAILIIGGAEDKVHGREILQTFWSRSGG-----NDAIIGIIPSASRE-PLLIGERYQTIFSDMGVK-ELKVLDIRDRAQG 99 (291)
T ss_dssp CCEEEECSSCCSSSCCHHHHHHHHHTTG-----GGCEEEEECTTCSS-HHHHHHHHHHHHHHHCCS-EEEECCCCSGGGG
T ss_pred ceEEEEECCCCccChHHHHHHHHHHcCC-----CCCeEEEEeCCCCC-hHHHHHHHHHHHHHcCCC-eeEEEEecCcccc
Confidence 4466666544433445566666555443 45788888765432 346777888888889874 5665532 3
Q ss_pred CHHHHHHHHHhCcEEEEcC--------CCCCCCh--HHHHHHHhC-CceEeeC
Q 016535 345 LYRDLVKLLGGAVVGIHSM--------IDEHFGI--SVVEYMAAG-AIPIGKH 386 (388)
Q Consensus 345 ~~~~l~~~~~~adv~v~ps--------~~E~~~~--~vlEAma~G-~PVI~~~ 386 (388)
+++++.+.+.+||+++++- .+...++ .+-|+...| +|++++.
T Consensus 100 ~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtS 152 (291)
T 3en0_A 100 DDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTS 152 (291)
T ss_dssp GCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEET
T ss_pred CCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeC
Confidence 3567888999999888762 2233333 367888889 8888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 388 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 6e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 39.5 bits (91), Expect = 6e-04
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 10/118 (8%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQ-------- 323
I SV + K P + A+ L K + R + +
Sbjct: 257 IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENE 316
Query: 324 --SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
+ K +L ++ + L+K+ + VG+ + + + + EY+AA
Sbjct: 317 AGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 374
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 388 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.97 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.97 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.96 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.84 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.84 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.79 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.66 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.49 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.41 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.24 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.13 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.92 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 97.68 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.62 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.41 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.38 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 95.9 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 95.48 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 95.31 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 93.74 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 87.3 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.97 E-value=1e-29 Score=243.67 Aligned_cols=162 Identities=14% Similarity=0.019 Sum_probs=129.2
Q ss_pred HHHHhccCCEEEECChhHHHHHHHH-h---------CCCCceEEEcCCCCCCCCccCCCC--------------------
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKL-W---------GIPDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~-~---------~~~~~~~vi~ngvd~~~~~~~~~~-------------------- 264 (388)
.+.....+|.++++|...++..... + ....++.+|+||+|.+.+.+....
T Consensus 200 ~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~ 279 (477)
T d1rzua_ 200 LKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKA 279 (477)
T ss_dssp HHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHH
T ss_pred HHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHH
Confidence 4455667999999999877655321 1 113578899999998876542111
Q ss_pred -------CCCCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCc
Q 016535 265 -------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (388)
Q Consensus 265 -------~~~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (388)
..++...++++||+.++||++.+++|+.++.+. +.+++++|.| +......+++...++ .++
T Consensus 280 ~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~------~~~l~~~G~G----~~~~~~~~~~~~~~~--~~~ 347 (477)
T d1rzua_ 280 VAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------GGRLVVLGAG----DVALEGALLAAASRH--HGR 347 (477)
T ss_dssp HHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT------TCEEEEEECB----CHHHHHHHHHHHHHT--TTT
T ss_pred HHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh------CCeEEEEecC----CchHHHHHHHHHhhc--CCe
Confidence 013357899999999999999999999998765 7899999988 455555666666654 478
Q ss_pred EEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 338 V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+.+.+..+.++...+|++||++|+||.+|+||++++|||+||+|||+||.+
T Consensus 348 v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~G 398 (477)
T d1rzua_ 348 VGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398 (477)
T ss_dssp EEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH
T ss_pred EEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCC
Confidence 999999999999999999999999999999999999999999999999863
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=5e-29 Score=229.73 Aligned_cols=158 Identities=18% Similarity=0.198 Sum_probs=132.6
Q ss_pred hccCCEEEECChhHHHHHHHHhCC-CCceEEEcCCCCCCCCccCCCCC-----------CCCCcEEEEEcccCCCCChHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER-----------STEYPAIISVAQFRPEKAHPL 286 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~-----------~~~~~~il~vgrl~~~Kg~~~ 286 (388)
...++.+++.++...+.+.+.++. ..++.+++||+|++.+.+..... ..++.+++++||+.++||++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~ 212 (370)
T d2iw1a1 133 QGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDR 212 (370)
T ss_dssp TTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHH
T ss_pred hccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhh
Confidence 346788999999999888777665 46789999999976543322111 145688999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCC
Q 016535 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366 (388)
Q Consensus 287 ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E 366 (388)
+++|++.+.++. ++..+.++|+++..+ ++++++++++..++++|+|+. +|+.++|++||++|+||..|
T Consensus 213 li~a~~~l~~~~----~~~~~~ii~g~~~~~------~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~~E 280 (370)
T d2iw1a1 213 SIEALASLPESL----RHNTLLFVVGQDKPR------KFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQE 280 (370)
T ss_dssp HHHHHHTSCHHH----HHTEEEEEESSSCCH------HHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCC
T ss_pred hccccccccccc----ccceeeecccccccc------ccccccccccccccccccccc--cccccccccccccccccccc
Confidence 999999998776 678888888765544 788889999999999999987 68999999999999999999
Q ss_pred CCChHHHHHHHhCCceEeeCCC
Q 016535 367 HFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 367 ~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+||++++|||+||+|||++|.+
T Consensus 281 ~~~~~~~EAma~G~PvI~s~~~ 302 (370)
T d2iw1a1 281 AAGIVLLEAITAGLPVLTTAVC 302 (370)
T ss_dssp SSCHHHHHHHHHTCCEEEETTS
T ss_pred cccceeeecccCCeeEEEeCCC
Confidence 9999999999999999999863
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.96 E-value=9.3e-28 Score=226.93 Aligned_cols=320 Identities=17% Similarity=0.080 Sum_probs=194.1
Q ss_pred ceEEEeccc-cC-CCCChhhHHHHHHHHHhhcCCCceEEEEecCCCCCchhHHHHhhhhhceecC-------------CC
Q 016535 35 TSVAFFHPN-TN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELL-------------HP 99 (388)
Q Consensus 35 ~~I~~~~p~-~~-~gGG~~~~~~~l~~~L~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~i~~~-------------~~ 99 (388)
|||+++... .+ ..||.++++.+|+++|+++| |+|+|+|+..+....+. ..+++.. .+
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~G--h~V~Vvtp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 72 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEE------IGKIRVFGEEVQVKVSYEERGN 72 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTSSCCEE------EEEEECSSSEEEEEEEEEEETT
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcC--CEEEEEecCCCccchhh------ccceeecccccceeeeeeccCC
Confidence 899998632 22 13699999999999999999 88999986542111100 0011111 11
Q ss_pred CeeEEecccccccc-CCC-Cceehhhh-hhh----HHHHHHHHHh-hcCCcEEEecCCcccccc--hhhhcCCeEEEEEe
Q 016535 100 PKVVHLYRRKWIEE-STY-PRFTMIGQ-SFG----SVYLSWEALC-KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTH 169 (388)
Q Consensus 100 ~~~~~~~~~~~~~~-~~~-~~~~~~~~-~~~----~~~~~~~~l~-~~~~Div~~~~~~~~~~~--~~~~~~~~~i~~~h 169 (388)
+.++.+.. .+... ..+ +.+..... ... .......+.. ...||+||.+........ +.+..++|.++++|
T Consensus 73 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~~~~v~~~h 151 (437)
T d2bisa1 73 LRIYRIGG-GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH 151 (437)
T ss_dssp EEEEEEES-SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHCCCEEEEES
T ss_pred eEEEecCc-cccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhccccCceeEEEe
Confidence 11111111 11111 011 11000000 000 1111111222 235799887644222222 34467899999999
Q ss_pred ccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHHHHHHhccCCEEEECChhHHHHHHHHhCC-CCceEE
Q 016535 170 YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKR 248 (388)
Q Consensus 170 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~-~~~~~v 248 (388)
.............. . .............++.....+|.+++.++.........++. ..++.+
T Consensus 152 ~~~~~~~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~v 214 (437)
T d2bisa1 152 RLNKSKLPAFYFHE--A---------------GLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITY 214 (437)
T ss_dssp SCCCCCEEHHHHHH--T---------------TCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEE
T ss_pred eccccccchhhhhh--c---------------cchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEE
Confidence 64421100000000 0 00000000000124555677999999999888766554433 578999
Q ss_pred EcCCCCCCCCccCCCCCC--------------CCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCC
Q 016535 249 VYPPCDTSGLQVLPLERS--------------TEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC 313 (388)
Q Consensus 249 i~ngvd~~~~~~~~~~~~--------------~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~ 313 (388)
++||+|.+.+.+...... .++..++++||+. ++||++.+++|+..+.++.. .++++|+++|.+
T Consensus 215 i~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~--~~~~~lvi~G~~ 292 (437)
T d2bisa1 215 VFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKE--FQEMRFIIIGKG 292 (437)
T ss_dssp CCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGG--GGGEEEEEECCB
T ss_pred EecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhcccccccc--cccceeeeeccc
Confidence 999999987765322111 3457899999997 57999999999999865432 268999999987
Q ss_pred CCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCCC
Q 016535 314 RNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHFK 388 (388)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~~ 388 (388)
+ ......++.+.+. .++++.+.|.++++++..+++.||++++||..|++|++++|||+||+|||++|.+
T Consensus 293 ~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g 361 (437)
T d2bisa1 293 D----PELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG 361 (437)
T ss_dssp C----HHHHHHHHHHHHT--CTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCT
T ss_pred c----cccccchhhhccc--cccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCC
Confidence 3 3333344444443 3467888999999999999999999999999999999999999999999999864
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=7e-21 Score=155.16 Aligned_cols=106 Identities=26% Similarity=0.342 Sum_probs=91.4
Q ss_pred cEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHH
Q 016535 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (388)
Q Consensus 270 ~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l 349 (388)
..++|+||+.++||++.+++|++.+ ++.+++++|.+...+ ..+.+.+.+.+.. .++|+|+|+++.+++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--------~~~~l~ivg~~~~~~---~~~~~~~~~~~~~-~~~v~~~g~~~~~~~ 80 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKGD---HAERYARKIMKIA-PDNVKFLGSVSEEEL 80 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTTS---THHHHHHHHHHHS-CTTEEEEESCCHHHH
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--------cCCeEEEEEeccccc---chhhhhhhhcccc-cCcEEEeeccccccc
Confidence 4588999999999999999999877 688999999876443 2334555555443 469999999999999
Q ss_pred HHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 350 ~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.++|+.||++|+||..|++|++++|||++|+|||+++.
T Consensus 81 ~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~ 118 (166)
T d2f9fa1 81 IDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE 118 (166)
T ss_dssp HHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS
T ss_pred ccccccccccccccccccccccccccccccccceeecC
Confidence 99999999999999999999999999999999999985
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.84 E-value=1.8e-20 Score=157.09 Aligned_cols=113 Identities=21% Similarity=0.204 Sum_probs=93.4
Q ss_pred CCCcEEEEEcccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 016535 267 TEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (388)
Q Consensus 267 ~~~~~il~vgrl~-~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~ 345 (388)
+++..++|+||+. ++||++.+++|++.+.++... ++++|+++|.+ +.++...++...+++ ...+.+.|.++
T Consensus 30 ~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g----~~~~~~~~~~~~~~~--~~~~~~~~~~~ 101 (196)
T d2bfwa1 30 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG----DPELEGWARSLEEKH--GNVKVITEMLS 101 (196)
T ss_dssp CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB----CHHHHHHHHHHHHHC--TTEEEECSCCC
T ss_pred CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec----ccchhhhhhhhhhcc--ceeEEeeeccc
Confidence 3567899999997 689999999999999655322 78999999987 333333444444443 35677889999
Q ss_pred HHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEeeCC
Q 016535 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGKHF 387 (388)
Q Consensus 346 ~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~~~ 387 (388)
.+++..+|+.||++|+||..|++|.+++|||+||+|||+++.
T Consensus 102 ~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~ 143 (196)
T d2bfwa1 102 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV 143 (196)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC
T ss_pred cccchhccccccccccccccccccccchhhhhcCceeeecCC
Confidence 999999999999999999999999999999999999999985
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=1.1e-18 Score=164.51 Aligned_cols=221 Identities=13% Similarity=0.079 Sum_probs=152.7
Q ss_pred cCC-cEEEecCCcccccc-hhh--hcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHHHHHHH
Q 016535 139 FTP-LYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (388)
Q Consensus 139 ~~~-Div~~~~~~~~~~~-~~~--~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
.++ |+++.+..+...+| ..+ ....++.+++|.|....+.+.... .++.
T Consensus 120 ~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~lp------------------------~~~~---- 171 (456)
T d1uqta_ 120 LQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALP------------------------TYDT---- 171 (456)
T ss_dssp CCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTST------------------------THHH----
T ss_pred ccCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhccCc------------------------chHH----
Confidence 355 56654443333344 333 456788899998875554432111 0111
Q ss_pred HHHHhccCCEEEECChhHHHHHHHH----h-------------CCCCceEEEcCCCCCCCCccCCCCC-----------C
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKL----W-------------GIPDRIKRVYPPCDTSGLQVLPLER-----------S 266 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~----~-------------~~~~~~~vi~ngvd~~~~~~~~~~~-----------~ 266 (388)
.....-.+|.+...+...++.+.+. . +...++.++|+|+|+..+....... .
T Consensus 172 il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~ 251 (456)
T d1uqta_ 172 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL 251 (456)
T ss_dssp HHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT
T ss_pred HHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc
Confidence 1222346788888887777666431 1 1123577899999987664321110 1
Q ss_pred CCCcEEEEEcccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHH---HHHHHHHHH-------hcCCCC
Q 016535 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER---LQSLKDKSI-------ELKVDG 336 (388)
Q Consensus 267 ~~~~~il~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~---~~~l~~~~~-------~~~l~~ 336 (388)
.++..++++||+++.||++.+++|++++.++++....++.++.+|.+...+..++ ..++.+++. ..+..+
T Consensus 252 ~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~ 331 (456)
T d1uqta_ 252 KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP 331 (456)
T ss_dssp TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCS
T ss_pred CCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCc
Confidence 4668999999999999999999999999998755445688888887755443332 233333332 346677
Q ss_pred cEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCc-----eEeeCC
Q 016535 337 NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI-----PIGKHF 387 (388)
Q Consensus 337 ~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~P-----VI~~~~ 387 (388)
.+.+.+.++.+++.++|+.||+++.||..||||++++|||+||+| +|+|+.
T Consensus 332 ~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~ 387 (456)
T d1uqta_ 332 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 387 (456)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETT
T ss_pred eeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCC
Confidence 899999999999999999999999999999999999999999999 888875
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=3.8e-07 Score=81.28 Aligned_cols=45 Identities=18% Similarity=0.061 Sum_probs=37.5
Q ss_pred CCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 334 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
...++...++. +++.++++.||++|.- +-+.++.||+++|+|+|.
T Consensus 229 ~~~~~~v~~f~--~~~~~lm~~adl~It~----~G~~T~~Eal~~g~P~I~ 273 (351)
T d1f0ka_ 229 GQPQHKVTEFI--DDMAAAYAWADVVVCR----SGALTVSEIAAAGLPALF 273 (351)
T ss_dssp TCTTSEEESCC--SCHHHHHHHCSEEEEC----CCHHHHHHHHHHTCCEEE
T ss_pred ccccceeeeeh--hhHHHHHHhCchhhcc----ccchHHHHHHHhCCceee
Confidence 34578888987 7789999999998875 445789999999999986
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.49 E-value=6.1e-06 Score=74.43 Aligned_cols=46 Identities=11% Similarity=-0.009 Sum_probs=38.1
Q ss_pred CCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 333 KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 333 ~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.+++|+.+.+++|..+ ++..+|++|+ .+...++.||+++|+|+|+.
T Consensus 283 ~~~~~v~~~~~~p~~~---ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~ 328 (401)
T d1rrva_ 283 DDRDDCFAIDEVNFQA---LFRRVAAVIH----HGSAGTEHVATRAGVPQLVI 328 (401)
T ss_dssp CCCTTEEEESSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHTCCEEEC
T ss_pred cCCCCEEEEeccCcHH---HhhhccEEEe----cCCchHHHHHHHhCCCEEEe
Confidence 3568999999997654 6788999996 46668899999999999874
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.41 E-value=1.3e-05 Score=71.99 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=37.1
Q ss_pred CCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 334 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++|+.+.+++|.. +++..+|++|+.+- ..++.|||++|+|+|+.
T Consensus 268 ~~~~v~i~~~~p~~---~ll~~a~~~v~hgG----~~t~~Eal~~G~P~v~~ 312 (391)
T d1pn3a_ 268 DGADCFVVGEVNLQ---ELFGRVAAAIHHDS----AGTTLLAMRAGIPQIVV 312 (391)
T ss_dssp CCTTCCEESSCCHH---HHHTTSSCEEEESC----HHHHHHHHHHTCCEEEE
T ss_pred CCCCEEEecccCHH---HHHhhccEEEecCc----hHHHHHHHHhCCcEEEe
Confidence 45899999999765 46789999997743 46899999999999974
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.24 E-value=0.00053 Score=61.18 Aligned_cols=208 Identities=10% Similarity=-0.001 Sum_probs=113.5
Q ss_pred HHHHhhcCCcEEEecCCcccccc---hhhhcCCeEEEEEeccccchhhhhhhhcCCccccCCccccccchhhhhhhHHHH
Q 016535 133 WEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT 209 (388)
Q Consensus 133 ~~~l~~~~~Div~~~~~~~~~~~---~~~~~~~~~i~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (388)
-+.+.+.+||+|+.......++. .+...++|++ +++.-..+-+. ..+......|
T Consensus 81 ~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~-HiegG~~s~~~---------------------~~~~~de~~R- 137 (377)
T d1o6ca_ 81 DELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVG-HVEAGLRTGNK---------------------YSPFPEELNR- 137 (377)
T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCT---------------------TTTTTHHHHH-
T ss_pred hhhhhhcccceeEeeecccccchhhhhhhhccceEE-EEecccccccc---------------------cccCchhhhc-
Confidence 34577889998765544333332 4447788874 35432211000 0011111222
Q ss_pred HHHHHHHHHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCC------CCccC-CCCCCCCCcEEEEEcccCCC
Q 016535 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTS------GLQVL-PLERSTEYPAIISVAQFRPE 281 (388)
Q Consensus 210 ~~~~~~~~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~------~~~~~-~~~~~~~~~~il~vgrl~~~ 281 (388)
+...+.||..++.++..++++.+.+-.+.++.++.++. |.- ..... ......++..+++.-|....
T Consensus 138 ------~~iskls~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~~~ 211 (377)
T d1o6ca_ 138 ------QMTGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRENL 211 (377)
T ss_dssp ------HHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC------
T ss_pred ------cccccceeEEeecchhhhhhhhhhccccceEeeccchhHHHHHHHHHHHHhhhhhhhccCCceEEEEecccccc
Confidence 23335599999999999999988754456788887763 310 00000 00111334556666655432
Q ss_pred -CChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHH-HHhcCCCCcEEEccCCCHHHHHHHHHhCcEE
Q 016535 282 -KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK-SIELKVDGNVEFYKNLLYRDLVKLLGGAVVG 359 (388)
Q Consensus 282 -Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~-~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~ 359 (388)
+.....++++..+.... .++.+++.... .. ..... .+.....+++.+...++..+...+++.|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~--~~------~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~v 279 (377)
T d1o6ca_ 212 GEPMENMFKAIRRIVGEF----EDVQVVYPVHL--NP------VVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFI 279 (377)
T ss_dssp ----HHHHHHHHHHHHHC----TTEEEEEC------C------HHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEE
T ss_pred ccchHHHHHHHHhhcccc----ccccccccccc--cc------ccchhhhhccccccceEeccccchHHHHHHHhhhhee
Confidence 33445556666665553 45655554332 11 22222 2233445799999999999999999999987
Q ss_pred EEcCCCCCCChHHHHHHHhCCceEeeC
Q 016535 360 IHSMIDEHFGISVVEYMAAGAIPIGKH 386 (388)
Q Consensus 360 v~ps~~E~~~~~vlEAma~G~PVI~~~ 386 (388)
+- ..|-.+.||-.+|+|+|.-.
T Consensus 280 Ig-----nSss~i~Ea~~lg~P~Inir 301 (377)
T d1o6ca_ 280 LT-----DSGGVQEEAPSLGKPVLVLR 301 (377)
T ss_dssp EE-----C--CHHHHGGGGTCCEEEEC
T ss_pred ec-----ccchhHHhhhhhhceEEEeC
Confidence 73 23445889999999999763
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.13 E-value=0.00033 Score=62.49 Aligned_cols=151 Identities=12% Similarity=0.008 Sum_probs=102.9
Q ss_pred hccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCCC-Cc---cCCCCCCCCCcEEEEEcccCCCCChHHHHHHHHH
Q 016535 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSG-LQ---VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (388)
Q Consensus 219 ~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~~-~~---~~~~~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~ 293 (388)
.+.||.-++.++..++++.+.+-.+.++.++.++. |.-. .. ........+++.+++.-|....++...+.+++..
T Consensus 141 skls~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~ 220 (373)
T d1v4va_ 141 DVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKR 220 (373)
T ss_dssp HHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHH
T ss_pred ccccceeeecchhhhhhhhhhcccccceeecccchhhHHHhhhhhcccccccccccceeEEeccccccchHHHHHHHHHH
Confidence 34599999999999999987654356777776653 3100 00 0011122445777777877777778888888888
Q ss_pred HHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHH
Q 016535 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVV 373 (388)
Q Consensus 294 l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vl 373 (388)
+.+.. .++.+++.... +........+.. ...+++.+...++..+...+++.|++++-=| |-.+.
T Consensus 221 ~~~~~----~~~~~i~p~~~----~~~~~~~~~~~~---~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssgi~ 284 (373)
T d1v4va_ 221 VAEAF----PHLTFVYPVHL----NPVVREAVFPVL---KGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQE 284 (373)
T ss_dssp HHHHC----TTSEEEEECCS----CHHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHH
T ss_pred Hhhhc----ccceeeeeecc----cccchhhhhhhh---cccccceeeccchHHHHHHHhhhceeEeccc-----chhhh
Confidence 87775 67777766543 222222333333 3336899999999999999999999777433 44678
Q ss_pred HHHHhCCceEee
Q 016535 374 EYMAAGAIPIGK 385 (388)
Q Consensus 374 EAma~G~PVI~~ 385 (388)
||.++|+|+|..
T Consensus 285 Ea~~lg~P~Ini 296 (373)
T d1v4va_ 285 EGAALGVPVVVL 296 (373)
T ss_dssp HHHHTTCCEEEC
T ss_pred cchhhcCcEEEe
Confidence 999999999966
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.92 E-value=0.0015 Score=59.26 Aligned_cols=45 Identities=11% Similarity=-0.167 Sum_probs=36.3
Q ss_pred CcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 336 ~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
+|+.+..+.+..++. .+.++|+||.- |-..++.||+.+|+|.|+.
T Consensus 330 ~n~~v~~~~pq~~~l-~~p~~~~fItH----GG~gs~~eAl~~GVP~l~~ 374 (461)
T d2acva1 330 GKGMICGWAPQVEVL-AHKAIGGFVSH----CGWNSILESMWFGVPILTW 374 (461)
T ss_dssp CSEEEESSCCHHHHH-HSTTEEEEEEC----CCHHHHHHHHHTTCCEEEC
T ss_pred CCeEEEecCCHHHHH-hcccCCEEEec----CCccHHHHHHHcCCCEEeC
Confidence 688888888776655 57889999875 5556899999999999974
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=97.68 E-value=0.0011 Score=58.74 Aligned_cols=45 Identities=18% Similarity=-0.014 Sum_probs=37.9
Q ss_pred CCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 334 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++|+++.+++|.. ++|..+|++|+ .+...++.||+++|+|+|+.
T Consensus 283 ~~~nv~~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~GvP~v~~ 327 (401)
T d1iira_ 283 DGADCFAIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGAPQILL 327 (401)
T ss_dssp CGGGEEECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEEC
T ss_pred CCCCEEEEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCCCEEEc
Confidence 45899999999754 56889999995 47788999999999999973
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=0.0062 Score=53.92 Aligned_cols=153 Identities=12% Similarity=0.005 Sum_probs=97.8
Q ss_pred HHhccCCEEEECChhHHHHHHHHhCCCCceEEEcCCC-CCC------CCcc----------CCCCCCCCCcEEEEEcccC
Q 016535 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTS------GLQV----------LPLERSTEYPAIISVAQFR 279 (388)
Q Consensus 217 ~~~~~a~~ii~~S~~~~~~l~~~~~~~~~~~vi~ngv-d~~------~~~~----------~~~~~~~~~~~il~vgrl~ 279 (388)
...+.||.-++.++..++++.+.+-.+.++.++.++. |.- .... .......++..+++.-|..
T Consensus 137 ~iskls~~hf~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~ 216 (376)
T d1f6da_ 137 LTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRE 216 (376)
T ss_dssp HHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBS
T ss_pred hhccceeEEEeccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccch
Confidence 3446699999999999999988755457787777753 310 0000 0000112334555555544
Q ss_pred -CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCHHHHHHHHHhCcE
Q 016535 280 -PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (388)
Q Consensus 280 -~~Kg~~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~~~l~~~~~~adv 358 (388)
..+....+++++..+.... .++.+++--.. .........+. ....+++.+...+++.+...+++.|++
T Consensus 217 ~~~~~~~~i~~~l~~~~~~~----~~~~ii~p~~~----~~~~~~~~~~~---~~~~~ni~~~~~l~~~~fl~ll~~a~~ 285 (376)
T d1f6da_ 217 SFGRGFEEICHALADIATTH----QDIQIVYPVHL----NPNVREPVNRI---LGHVKNVILIDPQEYLPFVWLMNHAWL 285 (376)
T ss_dssp SCCHHHHHHHHHHHHHHHHC----TTEEEEEECCB----CHHHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred hhhhhHHHHHHHHhhhhhhc----ceeEEeccccc----chhhhhhHhhh---hcccccceeeccccHHHHHHHHhhceE
Confidence 3555677788888887664 56666655432 22222222222 233478999999999999999999998
Q ss_pred EEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 359 GIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 359 ~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++-=| |-.+.||-..|+|+|.-
T Consensus 286 vignS-----ssgi~Ea~~lg~P~Ini 307 (376)
T d1f6da_ 286 ILTDS-----GGIQEEAPSLGKPVLVM 307 (376)
T ss_dssp EEESS-----SGGGGTGGGGTCCEEEC
T ss_pred EEecC-----cchHhhHHHhCCCEEEc
Confidence 77433 44677999999999864
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.41 E-value=0.017 Score=51.82 Aligned_cols=46 Identities=13% Similarity=-0.088 Sum_probs=35.6
Q ss_pred CCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 335 ~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++|+.+..++|+.++.. ..+++++|.- |-..++.||+.+|+|.|+.
T Consensus 318 ~~nv~~~~~~pq~~lL~-hp~~~~fItH----GG~~s~~eal~~GvP~v~~ 363 (450)
T d2c1xa1 318 RGYGMVVPWAPQAEVLA-HEAVGAFVTH----CGWNSLWESVAGGVPLICR 363 (450)
T ss_dssp TTTEEEESCCCHHHHHT-STTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred cccccccccCChHhhhc-cCceeEEEcc----CCccHHHHHHHcCCCEEec
Confidence 46899999998776432 3677888765 5556899999999999874
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.38 E-value=0.0012 Score=57.78 Aligned_cols=101 Identities=11% Similarity=-0.014 Sum_probs=63.2
Q ss_pred cEEEEEc-ccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCH
Q 016535 270 PAIISVA-QFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (388)
Q Consensus 270 ~~il~vg-rl~~~Kg~--~~ll~a~~~l~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~V~~~g~v~~ 346 (388)
..++..| +..+.|.. +..++.++.+.++ +.+++++|+.. +.+..+.+.+.........-+.+.|..+-
T Consensus 182 ~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~------~~~ivl~g~~~---e~~~~~~~~~~~~~~~~~~~~~l~g~~sl 252 (348)
T d1pswa_ 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAK---DHEAGNEILAALNTEQQAWCRNLAGETQL 252 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGG---GHHHHHHHHTTSCHHHHTTEEECTTTSCH
T ss_pred eEEeccccchhhccccchHHHhhhHHHHhhc------CCccccccccc---hHHHHHHHHHhhhcccccccccccCCccH
Confidence 3444444 33334543 4466777777654 56788888653 22223333222111111223556788899
Q ss_pred HHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEe
Q 016535 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIG 384 (388)
Q Consensus 347 ~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~ 384 (388)
.|+.++++.||++|.+... .+--|.++|+|+|+
T Consensus 253 ~el~~li~~a~l~I~~Dtg-----~~HlAaa~g~p~i~ 285 (348)
T d1pswa_ 253 DQAVILIAACKAIVTNDSG-----LMHVAAALNRPLVA 285 (348)
T ss_dssp HHHHHHHHTSSEEEEESSH-----HHHHHHHTTCCEEE
T ss_pred HHHHHHHhcceeEeecCcc-----HHHHHHHcCCCEEE
Confidence 9999999999999988543 56789999999997
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=95.90 E-value=0.083 Score=47.16 Aligned_cols=44 Identities=11% Similarity=-0.199 Sum_probs=35.8
Q ss_pred CCcEEEccCCCHHHHHHHH--HhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 335 DGNVEFYKNLLYRDLVKLL--GGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 335 ~~~V~~~g~v~~~~l~~~~--~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
++||.+..++|+.++ + .++++||+- |-..++.||+.+|+|.|+.
T Consensus 345 ~~Nv~~~~~~Pq~~l---L~hp~~~~fItH----GG~~s~~Eal~~GVP~lv~ 390 (473)
T d2pq6a1 345 ADRGLIASWCPQDKV---LNHPSIGGFLTH----CGWNSTTESICAGVPMLCW 390 (473)
T ss_dssp TTTEEEESCCCHHHH---HTSTTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred cCceEEeeeCCHHHH---hcCCcCcEEEec----CCccHHHHHHHcCCCEEec
Confidence 479999999987764 5 577888875 5567899999999999974
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.48 E-value=0.14 Score=48.90 Aligned_cols=171 Identities=13% Similarity=0.078 Sum_probs=117.2
Q ss_pred HHHHHhccCCEEEECChhHHHHHHHHhCC------CCceEEEcCCCCCCCCccC-------------------C------
Q 016535 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI------PDRIKRVYPPCDTSGLQVL-------------------P------ 262 (388)
Q Consensus 214 ~~~~~~~~a~~ii~~S~~~~~~l~~~~~~------~~~~~vi~ngvd~~~~~~~-------------------~------ 262 (388)
+...++..+..+-.+|+--.+.+++.+.. +.++..+-||+........ +
T Consensus 430 Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~ 509 (824)
T d2gj4a1 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK 509 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHH
Confidence 45556777888888998887777653211 4589999999986543110 0
Q ss_pred ---C--CC-----------------------------CCCCcEEEEEcccCCCCChHH----HHHHHHHHHHHhcCCCCC
Q 016535 263 ---L--ER-----------------------------STEYPAIISVAQFRPEKAHPL----QLEAFSVALRKLDADLPR 304 (388)
Q Consensus 263 ---~--~~-----------------------------~~~~~~il~vgrl~~~Kg~~~----ll~a~~~l~~~~~~~~~~ 304 (388)
. +. .++...++++-|+..+|+..+ ++.-+.++++.......+
T Consensus 510 l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P 589 (824)
T d2gj4a1 510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP 589 (824)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCC
Confidence 0 00 045678999999999999998 333345665543222346
Q ss_pred cEEEEEeCCCCCccHHHHHHHHHHHHhc----C----C--CCcEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHH
Q 016535 305 PRLQFVGSCRNKSDEERLQSLKDKSIEL----K----V--DGNVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISV 372 (388)
Q Consensus 305 ~~l~ivG~~~~~~~~~~~~~l~~~~~~~----~----l--~~~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~v 372 (388)
+++++.|...+.... -+++.+.+.+. . + .-+|.|+...+-+--..++.+||+-+..|. .|..|.+-
T Consensus 590 ~q~IFaGKAhP~d~~--gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSg 667 (824)
T d2gj4a1 590 RTVMIGGKAAPGYHM--AKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGN 667 (824)
T ss_dssp EEEEEECCCCTTCHH--HHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHH
T ss_pred eEEEEeCCCCCccHH--HHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcch
Confidence 899999987554322 22333322211 1 1 126999999988888889999999999874 79999999
Q ss_pred HHHHHhCCceEeeC
Q 016535 373 VEYMAAGAIPIGKH 386 (388)
Q Consensus 373 lEAma~G~PVI~~~ 386 (388)
+-+|..|.+.+++-
T Consensus 668 MK~alNGal~lstl 681 (824)
T d2gj4a1 668 MKFMLNGALTIGTM 681 (824)
T ss_dssp HHHHHTTCEEEECS
T ss_pred hHHHHcCCeeeccc
Confidence 99999999999874
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=95.31 E-value=0.16 Score=48.39 Aligned_cols=172 Identities=13% Similarity=0.024 Sum_probs=113.5
Q ss_pred HHHHhccCCEEEECChhHHHHHHHHhCC------CCceEEEcCCCCCCCCcc---------------CCC----------
Q 016535 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI------PDRIKRVYPPCDTSGLQV---------------LPL---------- 263 (388)
Q Consensus 215 ~~~~~~~a~~ii~~S~~~~~~l~~~~~~------~~~~~vi~ngvd~~~~~~---------------~~~---------- 263 (388)
...++..+..+..+|+--.+..++.+.. +.++.-+-||+....... ..+
T Consensus 407 a~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~ 486 (796)
T d1l5wa_ 407 ANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINL 486 (796)
T ss_dssp HHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGG
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHH
Confidence 3556677888999998887766553211 457889999997422100 000
Q ss_pred ----------------------------------CCCCCCcEEEEEcccCCCCChHHHHHHHHH----HHHHhcCCCCCc
Q 016535 264 ----------------------------------ERSTEYPAIISVAQFRPEKAHPLQLEAFSV----ALRKLDADLPRP 305 (388)
Q Consensus 264 ----------------------------------~~~~~~~~il~vgrl~~~Kg~~~ll~a~~~----l~~~~~~~~~~~ 305 (388)
.-.++...++++-|+..+|+.++++.-... +++.......++
T Consensus 487 ~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pv 566 (796)
T d1l5wa_ 487 EKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPR 566 (796)
T ss_dssp GGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCE
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCce
Confidence 000456789999999999999995543333 322211112358
Q ss_pred EEEEEeCCCCCccH--HHHHHHHHHHHhc----CCC--CcEEEccCCCHHHHHHHHHhCcEEEEcCC--CCCCChHHHHH
Q 016535 306 RLQFVGSCRNKSDE--ERLQSLKDKSIEL----KVD--GNVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEY 375 (388)
Q Consensus 306 ~l~ivG~~~~~~~~--~~~~~l~~~~~~~----~l~--~~V~~~g~v~~~~l~~~~~~adv~v~ps~--~E~~~~~vlEA 375 (388)
+++++|..-+.... +..+.+.+.++.. .+. -+|.|+...+-+--..+.++||+-+..|. .|..|.+-+=|
T Consensus 567 q~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKa 646 (796)
T d1l5wa_ 567 VFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKL 646 (796)
T ss_dssp EEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHH
T ss_pred EEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHH
Confidence 99999987554211 2222233333211 111 26999999988888889999999999874 79999999999
Q ss_pred HHhCCceEeeC
Q 016535 376 MAAGAIPIGKH 386 (388)
Q Consensus 376 ma~G~PVI~~~ 386 (388)
|..|.+.+++-
T Consensus 647 alNG~lnlstl 657 (796)
T d1l5wa_ 647 ALNGALTVGTL 657 (796)
T ss_dssp HHTTCEEEECS
T ss_pred HHcCCeeeecc
Confidence 99999999874
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.74 E-value=2 Score=37.53 Aligned_cols=47 Identities=9% Similarity=-0.204 Sum_probs=36.4
Q ss_pred CCCcEEEccCCCHHHHHHHHHhCcEEEEcCCCCCCChHHHHHHHhCCceEee
Q 016535 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIGK 385 (388)
Q Consensus 334 l~~~V~~~g~v~~~~l~~~~~~adv~v~ps~~E~~~~~vlEAma~G~PVI~~ 385 (388)
.++||.+.+++|+.++.+ ..++++||+= |-..++.||+.+|+|.|+.
T Consensus 332 ~~~nv~~~~w~Pq~~lL~-hp~~~~fVtH----GG~gS~~EAl~~GvP~v~~ 378 (471)
T d2vcha1 332 KKRGFVIPFWAPQAQVLA-HPSTGGFLTH----CGWNSTLESVVSGIPLIAW 378 (471)
T ss_dssp TTTEEEEESCCCHHHHHH-STTEEEEEEC----CCHHHHHHHHHHTCCEEEC
T ss_pred cCCCeeecccCCHHHHhc-CccCCEEEec----CCccHHHHHHHcCCCEEEc
Confidence 357899999999887432 2567788764 4556899999999999974
|