Citrus Sinensis ID: 016558

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
Protein Sequence
MDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHEEEccccccccEEEEEEcccccEEEEEEEcccccccccccEEcccccccEEEEEEcccccccEEEEcccccEEEEccccccccEEEEEEcccEEEEccccHHHHHHHHHHHHHcEEEEEEEcEEcccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEEccccccEEEEEEcccccccccccEEEcccccEEEEEEEEcccccEEEEEccccEEEEEEcccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHEEEccccccccccccEccccccccccccccHHccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mdllspspvkenvsgtdflspspvkthvngtdnrknggvkekaiddksnengksggakgktnddkrsetdngkigvgkektgdksdetengkngrakekpiadktnvtdneknggvkeksdksnetdngknggakekntddksnemdngknggvkektiddksgsefgvnetcnglhkcEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPtavenplkqlkiSKHQTQKINISLsarknsklvlnagngecvlhmgrpaseekifiylpsydkiltpinGAYFLILSVLIFGVTWACCkcrkrrwndgvpyqelemglpesvsamnvetaegwdegwdddwdennavkspgasrigsisangltsrspnrdgwehdwne
Flexible Loop (DISEMBL)
mdllspspvkenvsgtdflspspvkthvngtdnrknggvkekaiddksnengksggakgktnddkrsetdngkigvgkektgdksdetengkngrakekpiadktnvtdneknggvkeksdksnetdngknggakekntddksnemdngknggvkektiddksgsefGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINIslsarknsklVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVkspgasrigsisangltsrspnrdgwehdwne
Low Complexity Region (SEG)
MDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAegwdegwdddwdeNNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Disordered region (IsUnstruct)
**********************************************************************************************************************************************************************FGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLP**V*AMNVETAEGWDEGWDD****************************************
Disordered Region (DISOPRED)
***********************************************************************************************************************************************************************************EDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVE***********************KNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWN**VPY********************GWDEGWDDDWDENNA*********************************
Disordered Region (DISEMBL)
MDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDK**********************DNGKIGVGK*****************AKEKPIADKTNVTDNE*********************************EMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Disordered Region (DISPRO)
******SP***********************************************************************************************************************************************************************LHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPE*************DEGWDDDWDENNA*********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHDWNE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	387
255575582	329	conserved hypothetical protein [Ricinus	0.656	0.772	0.525	4e-59
356530173	342	PREDICTED: uncharacterized protein LOC10	0.604	0.684	0.528	1e-55
297735540	320	unnamed protein product [Vitis vinifera]	0.653	0.790	0.528	1e-55
15230528	390	uncharacterized protein [Arabidopsis tha	0.658	0.653	0.490	1e-51
357506673	364	hypothetical protein MTR_7g073280 [Medic	0.591	0.629	0.485	3e-51
297819856	390	hypothetical protein ARALYDRAFT_485510 [	0.560	0.556	0.539	7e-50
225439695	309	PREDICTED: uncharacterized protein LOC10	0.625	0.783	0.498	7e-50
118486642	350	unknown [Populus trichocarpa]	0.609	0.674	0.467	4e-48
334185891	410	uncharacterized protein [Arabidopsis tha	0.658	0.621	0.457	7e-48
224139368	157	predicted protein [Populus trichocarpa]	0.397	0.980	0.564	7e-47

>gi|255575582|ref|XP_002528691.1| conserved hypothetical protein [Ricinus communis] gi|223531863|gb|EEF33680.1| conserved hypothetical protein [Ricinus communis]

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 145/276 (52%), Positives = 182/276 (65%), Gaps = 22/276 (7%)

Query: 123 SNETDNGKNGGAKEKNTDDKS--------NEMDNGKNGGVKEKTIDDKSGSEFGVNETCN 174
           SNET  G    +KE N++  +        NE +N KN   + KT D    S+  + + C+
Sbjct: 65  SNETTTGSKVNSKELNSNTDTTRPPPMLVNEGNNIKN---ENKTTD----SQLEIGQNCS 117

Query: 175 GLHK-CEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKH 233
           G+ + C D  +L+ACI N D    +  ILVQNEGE  L V I+ P   E+      ++KH
Sbjct: 118 GMLRFCRDDASLVACILNSDPEYKKFVILVQNEGESNLKVDISAPNPDES--TSFAMTKH 175

Query: 234 QTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLI 293
           QT KIN  LS   +++++  AGNGECVLH   P S+  IF  LPSYD+++TPINGAYFLI
Sbjct: 176 QTSKIN--LSVGDSNQVIFKAGNGECVLHTDIPVSQGNIFFNLPSYDRLITPINGAYFLI 233

Query: 294 LSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENN 353
           ++VLIFG    CC  RK+R  DG+PYQELEMGLPES  A NVETAEGWD+GWDDDWDE N
Sbjct: 234 VTVLIFGGMSICCLFRKKRQQDGIPYQELEMGLPESSLANNVETAEGWDQGWDDDWDEEN 293

Query: 354 AVKSPGASRIGSISANGLTSRSPN--RDGWEHDWNE 387
           AVKSP A   GSIS+NGLTSRSP   RDGWE+DW++
Sbjct: 294 AVKSPAAGHTGSISSNGLTSRSPTSKRDGWENDWDD 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530173|ref|XP_003533658.1| PREDICTED: uncharacterized protein LOC100814077 [Glycine max]

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/244 (52%), Positives = 171/244 (70%), Gaps = 10/244 (4%)

Query: 147 DNGKNGGVKEKTIDDKSGSEFGVN---ETCNGLHKCEDLKALIACIQNFDTGSGELTILV 203
           D+G + G+ +K  D   G +F  N   ETC+G +KC D   ++ACI   D     L +L+
Sbjct: 106 DDGGDKGL-DKENDKIEGMKFSHNSTTETCDGFNKCTDDGGMVACISKID--PKYLVVLL 162

Query: 204 QNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHM 263
            N G+  +IV +   T  +N L  +++ K +T+K+NI+ S+ K+++L LNAG G+CVLHM
Sbjct: 163 HNGGDGIIIVKLR--TDFDNNLGDVEVHKSKTEKVNITQSSSKSTQLTLNAGKGDCVLHM 220

Query: 264 GRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELE 323
                +E   + LPSYDKILTP+NGAYFLIL VL+FG TWACC CRK+  +D VPYQELE
Sbjct: 221 VSNIPDENFILRLPSYDKILTPVNGAYFLILMVLVFGGTWACCACRKKH-HDEVPYQELE 279

Query: 324 MGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEH 383
           M LPES  A NVE+AEGWD+ WDDDWD+N AVKSP A+  GSIS NGLTSRS N+DGWE+
Sbjct: 280 MALPESALATNVESAEGWDQDWDDDWDDNVAVKSP-AAHAGSISGNGLTSRSSNKDGWEN 338

Query: 384 DWNE 387
           +W++
Sbjct: 339 NWDD 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735540|emb|CBI18034.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/265 (52%), Positives = 180/265 (67%), Gaps = 12/265 (4%)

Query: 127 DNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGL-HKCEDLKA- 184
           D GK G  K K+    +       + G +++  DDK+ SE G   TC+GL  KC D K  
Sbjct: 64  DPGKLGKEKSKDAPVPTTNSSKADSKGKQKEKNDDKASSELGTYGTCDGLLEKCTDPKKK 123

Query: 185 LIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSA 244
           +IACIQ+F+ GS  L  +VQNEGE TL V +T+  +V++ L+ L I KHQT+ +NI  + 
Sbjct: 124 MIACIQSFENGSKAL--IVQNEGENTLKVNLTVSDSVKDALEVLVIPKHQTRSMNILSTG 181

Query: 245 RKNSKLVLNAGNGECVL--HMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVT 302
             +SKLVLNAGN +CV   H+    SE   F +LP + +++TPI G YFL L+ L+ G  
Sbjct: 182 --SSKLVLNAGNKDCVFENHL---ISEGNFFQWLP-HSELVTPIYGVYFLFLTALVVGAM 235

Query: 303 WACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASR 362
           W CCK RKRR   GVPYQELEMGLPES  A+NVETA GWDEGWDDDWDE+ AVKSPG   
Sbjct: 236 WTCCKFRKRRHQGGVPYQELEMGLPESSPAVNVETAAGWDEGWDDDWDEDKAVKSPGGRY 295

Query: 363 IGSISANGLTSRSPNRDGWEHDWNE 387
           +GSIS+NGLT+RS NR+GWE+DW++
Sbjct: 296 VGSISSNGLTTRSSNREGWENDWDD 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15230528|ref|NP_190726.1| uncharacterized protein [Arabidopsis thaliana] gi|6572079|emb|CAB63022.1| putative protein [Arabidopsis thaliana] gi|124301012|gb|ABN04758.1| At3g51580 [Arabidopsis thaliana] gi|332645287|gb|AEE78808.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/275 (49%), Positives = 176/275 (64%), Gaps = 20/275 (7%)

Query: 127 DNGK---NGGAKEKNTDDKSNEMDNGKNGGVKEKTI----DDKSGSEFGVNETCNG-LHK 178
           D+GK   N     K+ +   NE + GK      K      DDK  SE    +TC G  + 
Sbjct: 122 DSGKLPANMAPPPKSLESGKNETEPGKESPPLAKDPAKGKDDKGSSESASVDTCVGKSNI 181

Query: 179 CEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKI 238
           C    +L+AC  + D G+    ILVQNEGE +L   I +P    N L++L + KHQ+QK+
Sbjct: 182 CRTENSLVACTLSIDKGAANWLILVQNEGETSLKAKIVLPV---NALQELTLPKHQSQKV 238

Query: 239 NISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLI 298
           NIS+S   N K++L+ G G+C LHM  P+ E  +  + PSY+K++TPINGAYFLI+SV+I
Sbjct: 239 NISISGDTN-KIILDTGKGQCALHM-YPSEESTLPFHFPSYEKLVTPINGAYFLIVSVII 296

Query: 299 FGVTWACCKCRK-RRWNDGVPYQELEM----GLPESVSAMNVETAEGWDEGWDDDWDENN 353
           FG  WA C CRK RR   GVPY+ELE+    GL       +VETA+  DEGWDDDWDENN
Sbjct: 297 FGGIWAFCLCRKNRRAGSGVPYRELELSGGPGLENESGVHDVETADW-DEGWDDDWDENN 355

Query: 354 AVKSPG-ASRIGSISANGLTSRSPNRDGWEHDWNE 387
           AVKSPG A++  SISANGLT+R+PNRDGW+HDW++
Sbjct: 356 AVKSPGSAAKSVSISANGLTARAPNRDGWDHDWDD 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506673|ref|XP_003623625.1| hypothetical protein MTR_7g073280 [Medicago truncatula] gi|355498640|gb|AES79843.1| hypothetical protein MTR_7g073280 [Medicago truncatula]

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/243 (48%), Positives = 161/243 (66%), Gaps = 14/243 (5%)

Query: 147 DNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNE 206
           + GKN G+K         +    N+TC GLH C D   ++ACI   D  S    +L+QN 
Sbjct: 134 EKGKNEGIKL--------AHSTTNDTCEGLHTCRDDGDMVACISKMD--SKNFVVLLQNR 183

Query: 207 GEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMG-- 264
           G  T  + + + + +E+ L  + + K++T+K+ I     ++++L L+AG G+CVLH+   
Sbjct: 184 GGGT--IKVKLRSDLESNLGDIVVDKNKTEKVTIKQIKSESTELTLDAGKGDCVLHVTVV 241

Query: 265 RPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEM 324
            P  E   F+ LPS+DKILTP+NGAYFLI +V++F VTWACC   K++  D +PYQELEM
Sbjct: 242 TPVPEASFFLRLPSFDKILTPVNGAYFLIFTVIVFAVTWACCCIFKKKPRDEIPYQELEM 301

Query: 325 GLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIGSISANGLTSRSPNRDGWEHD 384
            LPES SA  VE+AEGWD+GWDDDWD+N AVKSP     GSISANGLTSRS N+DGWE +
Sbjct: 302 ALPESASATVVESAEGWDQGWDDDWDDNVAVKSPVVRHAGSISANGLTSRSSNKDGWEDN 361

Query: 385 WNE 387
           W++
Sbjct: 362 WDD 364

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819856|ref|XP_002877811.1| hypothetical protein ARALYDRAFT_485510 [Arabidopsis lyrata subsp. lyrata] gi|297323649|gb|EFH54070.1| hypothetical protein ARALYDRAFT_485510 [Arabidopsis lyrata subsp. lyrata]

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/230 (53%), Positives = 159/230 (69%), Gaps = 13/230 (5%)

Query: 165 SEFGVNETCNG-LHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVEN 223
           SE    ETC G  + C    +L+AC  + D GS    ILVQN+GEK+L   I +P    N
Sbjct: 167 SESASVETCIGKSNICRTENSLVACTLSIDKGSANWLILVQNDGEKSLKAKIVLPV---N 223

Query: 224 PLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKIL 283
            L++L + KH +Q+INIS+S   N K++L+ G GEC LHM  P+ E  +  + PSY+K++
Sbjct: 224 SLQELTLPKHHSQRINISISGDTN-KIILDGGKGECALHM-YPSEENTLPFHFPSYEKLV 281

Query: 284 TPINGAYFLILSVLIFGVTWACCKCRK-RRWNDGVPYQELEM----GLPESVSAMNVETA 338
           TPINGAYFLI+SV+IFG  WA C CRK RR   GVPY+ELE+    GL       +VETA
Sbjct: 282 TPINGAYFLIVSVVIFGGIWAFCLCRKNRRAGTGVPYRELELSGGPGLENESVVHDVETA 341

Query: 339 EGWDEGWDDDWDENNAVKSP-GASRIGSISANGLTSRSPNRDGWEHDWNE 387
           +  DEGWDDDWDENNAVKSP GA++  SISANGLT+R+PNRDGW+HDW++
Sbjct: 342 DW-DEGWDDDWDENNAVKSPGGAAKSVSISANGLTARAPNRDGWDHDWDD 390

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439695|ref|XP_002267693.1| PREDICTED: uncharacterized protein LOC100253448 [Vitis vinifera]

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 132/265 (49%), Positives = 173/265 (65%), Gaps = 23/265 (8%)

Query: 127 DNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGL-HKCEDLKA- 184
           D GK G  K K+    +       + G +++  DDK+ SE G   TC+GL  KC D K  
Sbjct: 64  DPGKLGKEKSKDAPVPTTNSSKADSKGKQKEKNDDKASSELGTYGTCDGLLEKCTDPKKK 123

Query: 185 LIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSA 244
           +IACIQ+F+ GS  L  +VQNEGE TL V +T+  +V++ L+             +++ +
Sbjct: 124 MIACIQSFENGSKAL--IVQNEGENTLKVNLTVSDSVKDALE-------------MNILS 168

Query: 245 RKNSKLVLNAGNGECVL--HMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVT 302
             +SKLVLNAGN +CV   H+    SE   F +LP + +++TPI G YFL L+ L+ G  
Sbjct: 169 TGSSKLVLNAGNKDCVFENHL---ISEGNFFQWLP-HSELVTPIYGVYFLFLTALVVGAM 224

Query: 303 WACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASR 362
           W CCK RKRR   GVPYQELEMGLPES  A+NVETA GWDEGWDDDWDE+ AVKSPG   
Sbjct: 225 WTCCKFRKRRHQGGVPYQELEMGLPESSPAVNVETAAGWDEGWDDDWDEDKAVKSPGGRY 284

Query: 363 IGSISANGLTSRSPNRDGWEHDWNE 387
           +GSIS+NGLT+RS NR+GWE+DW++
Sbjct: 285 VGSISSNGLTTRSSNREGWENDWDD 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486642|gb|ABK95158.1| unknown [Populus trichocarpa]

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/263 (46%), Positives = 159/263 (60%), Gaps = 27/263 (10%)

Query: 138 NTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVN-ETCN--GLHKCEDLKALIACIQNFDT 194
           N  D   E +N +   V E+    K+ SE  V  E C   G+ +C D K++ ACI  FD 
Sbjct: 102 NQTDSEAEKNNDEKKKVSEEKDHHKTDSESEVGGENCTKVGIKRCTDRKSMSACILGFDN 161

Query: 195 GSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARKNSKL---- 250
            S    +L+QN GE+ L V +  P +V+N L +L   KHQT+KI                
Sbjct: 162 ESQRWIVLIQNSGERDLSVDVHAPNSVDNSLVEL--GKHQTKKI------------ILTV 207

Query: 251 ------VLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFLILSVLIFGVTWA 304
                 +LNA NGECVLH+    S    F++ PSYD+++TPINGAYFLI++ ++FG T+ 
Sbjct: 208 GENTEVILNAKNGECVLHLDPLESHGNFFLHFPSYDQLITPINGAYFLIVTAVVFGGTFT 267

Query: 305 CCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDENNAVKSPGASRIG 364
           CC  RKRR   G  YQELEM +PES  A  VETAEGWD  WDD+WDE NA+KSP A    
Sbjct: 268 CCMFRKRRREAGTAYQELEMAMPESGVANIVETAEGWDNDWDDNWDEENAIKSPAACHSA 327

Query: 365 SISANGLTSRSPNRDGWEHDWNE 387
           S+SANGLTSRS N+DGWE+DW++
Sbjct: 328 SVSANGLTSRSLNKDGWENDWDD 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334185891|ref|NP_001190055.1| uncharacterized protein [Arabidopsis thaliana] gi|332645288|gb|AEE78809.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 135/295 (45%), Positives = 176/295 (59%), Gaps = 40/295 (13%)

Query: 127 DNGK---NGGAKEKNTDDKSNEMDNGKNGGVKEKTI----DDKSGSEFGVNETCNG-LHK 178
           D+GK   N     K+ +   NE + GK      K      DDK  SE    +TC G  + 
Sbjct: 122 DSGKLPANMAPPPKSLESGKNETEPGKESPPLAKDPAKGKDDKGSSESASVDTCVGKSNI 181

Query: 179 CEDLKALIACIQNFDTG--------------------SGELTILVQNEGEKTLIVTITIP 218
           C    +L+AC  + D G                    +    ILVQNEGE +L   I +P
Sbjct: 182 CRTENSLVACTLSIDKGYETFLDIIVIPQQFARSLLCAANWLILVQNEGETSLKAKIVLP 241

Query: 219 TAVENPLKQLKISKHQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPS 278
               N L++L + KHQ+QK+NIS+S   N K++L+ G G+C LHM  P+ E  +  + PS
Sbjct: 242 V---NALQELTLPKHQSQKVNISISGDTN-KIILDTGKGQCALHM-YPSEESTLPFHFPS 296

Query: 279 YDKILTPINGAYFLILSVLIFGVTWACCKCRK-RRWNDGVPYQELEM----GLPESVSAM 333
           Y+K++TPINGAYFLI+SV+IFG  WA C CRK RR   GVPY+ELE+    GL       
Sbjct: 297 YEKLVTPINGAYFLIVSVIIFGGIWAFCLCRKNRRAGSGVPYRELELSGGPGLENESGVH 356

Query: 334 NVETAEGWDEGWDDDWDENNAVKSPG-ASRIGSISANGLTSRSPNRDGWEHDWNE 387
           +VETA+  DEGWDDDWDENNAVKSPG A++  SISANGLT+R+PNRDGW+HDW++
Sbjct: 357 DVETADW-DEGWDDDWDENNAVKSPGSAAKSVSISANGLTARAPNRDGWDHDWDD 410

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139368|ref|XP_002323078.1| predicted protein [Populus trichocarpa] gi|222867708|gb|EEF04839.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 116/154 (75%)

Query: 233 HQTQKINISLSARKNSKLVLNAGNGECVLHMGRPASEEKIFIYLPSYDKILTPINGAYFL 292
           H    I I+L+  ++++++LNA NG CVLH+    S+   F+ LPSYD+++TPINGAYFL
Sbjct: 3   HIGDLIIINLTVGQSTEVILNAKNGACVLHLDPLESQANFFMNLPSYDQLITPINGAYFL 62

Query: 293 ILSVLIFGVTWACCKCRKRRWNDGVPYQELEMGLPESVSAMNVETAEGWDEGWDDDWDEN 352
           I++V++FG T ACC CRK R   G+ YQELEM +PES  A + ETA GWD+ WDD+WDE 
Sbjct: 63  IITVVVFGGTLACCMCRKGRLEAGIAYQELEMAMPESGVANDFETAGGWDKVWDDNWDEE 122

Query: 353 NAVKSPGASRIGSISANGLTSRSPNRDGWEHDWN 386
           NA+KSP A    S+SANGLTSR+PN+DGWE+DW+
Sbjct: 123 NAIKSPAARHSASVSANGLTSRTPNKDGWENDWD 156

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	387
TAIR|locus:504956308	351	AT1G64385 "AT1G64385" [Arabido	0.576	0.635	0.282	1.5e-10
UNIPROTKB|Q5JSK6	161	HMGN5 "High mobility group nuc	0.328	0.788	0.318	3.4e-08
TAIR|locus:504955937	734	AT2G22795 "AT2G22795" [Arabido	0.537	0.283	0.239	4.3e-08
WB|WBGene00016360	390	C33G8.2 [Caenorhabditis elegan	0.361	0.358	0.310	6.9e-08
DICTYBASE|DDB_G0287817	1023	wdr24 "WD40 repeat-containing	0.586	0.221	0.239	1.4e-07
GENEDB_PFALCIPARUM|PF14_0404	3543	PF14_0404 "hypothetical protei	0.421	0.046	0.288	3.5e-07
UNIPROTKB|Q8IL45	3543	TREP "TRAP-related protein" [P	0.421	0.046	0.288	3.5e-07
DICTYBASE|DDB_G0289971	2036	med24 "putative mediator compl	0.418	0.079	0.230	5.3e-07
GENEDB_PFALCIPARUM|MAL13P1.114	3447	MAL13P1.114 "hypothetical prot	0.441	0.049	0.305	5.7e-07
UNIPROTKB|C0H5C8	3447	MAL13P1.114 "Uncharacterized p	0.441	0.049	0.305	5.7e-07

TAIR|locus:504956308 AT1G64385 "AT1G64385" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 71/251 (28%), Positives = 117/251 (46%)

Query:   106 NVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGK----NGGVKEKTIDD 161
             NVTD+     +     K++  D+    G   K     S++ D GK        +E+    
Sbjct:    45 NVTDSSSKSIITIDHSKNSTNDDDTQLGDGSKMIGSDSSKSDQGKIASDESDKEEEEAVS 104

Query:   162 KSGS--EFGVN-ETCNGLHKC-EDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITI 217
             K+ S  + G + E C+  + C +D     AC++     +  L++L+QN+G++ LIVTIT 
Sbjct:   105 KNSSRKKQGFHGEECDPSNMCIDDEHEFSACLRVPGNDAPHLSLLIQNKGKRALIVTITA 164

Query:   218 PTAVENPLKQLKISKHQTQKINISLSARK----NSKLVLNAGNGECVLHMGRPA------ 267
             P  V   L++ K+   Q + I + +S +K    +S +VL +  G C L +   A      
Sbjct:   165 PVFVR--LEKDKVQLLQNEDIKVKVSIKKGGSNDSAIVLASSKGRCRLELKDLAAAAHET 222

Query:   268 -SEEKIFIYLPSY----DKILTPINGAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQEL 322
              S++ + +  PS      + L  I    FL+LS++I  V     K  K R N+   YQ L
Sbjct:   223 ESDDTVSVSRPSILNISSRTLIVIIMISFLVLSLVIIPVIIHVYK-NKSRGNN--KYQRL 279

Query:   323 EMGLPESVSAM 333
             +M LP S  A+
Sbjct:   280 DMELPVSNPAL 290

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|Q5JSK6 HMGN5 "High mobility group nucleosome-binding domain-containing protein 5" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 43/135 (31%), Positives = 58/135 (42%)

Query:    54 SGGAKGKTNDDKRSET-DNGKIGVG--KEKTGDKSDETENGKNGRAK--EKPIADKTNVT 108
             S   K KT  D   E  D     V   K++   + D  EN KNG AK  E P ++K  V 
Sbjct:    30 SSSRKMKTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIVE 89

Query:   109 DNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFG 168
               E+N  +++ ++K  E         K +  D K +E D  +  G   K   D+ G E G
Sbjct:    90 VKEEN--IEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDG 147

Query:   169 VNETCNGLHKCEDLK 183
               E  NG  K ED K
Sbjct:   148 -KEDKNGNEKGEDAK 161

GO:0000785 "chromatin" evidence=IEA

GO:0031492 "nucleosomal DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

TAIR|locus:504955937 AT2G22795 "AT2G22795" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 55/230 (23%), Positives = 104/230 (45%)

Query:    10 KENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSET 69
             K++  G +       + +  GT+  +  G +E  ++++ +  G     K  T + +  E 
Sbjct:   131 KKDSGGVEESEVEEKRDNGGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEER 190

Query:    70 -DNGKIGVGK-EKTGDKSDETENGK-NGRAKE--KPIADKTNVTDNEKNGGVKEKSDKS- 123
              DNG  G  + EK+G +  E E  K NG  +E  K  ++++ V + + NGG +E  +KS 
Sbjct:   191 KDNG--GTEENEKSGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSG 248

Query:   124 ---NETDNGK-NGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKC 179
                +E +  K NG ++E   ++K       ++   KEK ID+K+  E    E     +K 
Sbjct:   249 TEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEKANIE----EARENNYKG 304

Query:   180 EDLKALIACIQNFDTGSGELTILVQNE-GEKT-----LIVTITIPTAVEN 223
             +D  + +       T   E +  V+++ G KT      ++   +P   +N
Sbjct:   305 DDASSEVVHESEEKTSESENSEKVEDKSGIKTEEVEDSVIKSVLPNTTDN 354

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

WB|WBGene00016360 C33G8.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 151 (58.2 bits), Expect = 6.9e-08, P = 6.9e-08
 Identities = 45/145 (31%), Positives = 61/145 (42%)

Query:    25 KTHVNGTDNR--KNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTG 82
             K   N  D+   K    K+K  D+   E  K    K K  DD   E +N K    K+K  
Sbjct:   167 KDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKKD 226

Query:    83 DKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDN-GKNGGAKEKNTDD 141
             DK D+       + K+K   DK    D+E+    K+K  K N+ D   K    K+K  DD
Sbjct:   227 DKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDD 286

Query:   142 KSNEMDNGKNGGVKEKTIDDKSGSE 166
                + DN K    K+K  DDK   +
Sbjct:   287 DDEDEDNKKKDKKKKK--DDKDDED 309

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0007067 "mitosis" evidence=IMP

DICTYBASE|DDB_G0287817 wdr24 "WD40 repeat-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 60/251 (23%), Positives = 106/251 (42%)

Query:     6 PSPVK-ENVSGTDFLSPSPVKTHVN------GTDNRKNGG----VKEKAIDDKSNENGKS 54
             P+ +  E    TD +S +    HVN       T+N  N      +++K+   KS +  K 
Sbjct:   653 PTSISLERQKSTDNISDNNSNVHVNIKRQNQPTNNNNNNSNIDNLEKKSNKSKSTKENKE 712

Query:    55 GGA----KGKTNDDKRSETDNGKI-GVGKEKTGDKSDETEN-GKNGRAKEKPIADKTNVT 108
                    K K ND+K  + DN +I    K+   D  ++ +N G++         +  N  
Sbjct:   713 SSLTDQNKQKRNDNKE-KIDNNEIDNDNKDNNDDDDNDVDNIGEDNDEINNNNDNNNNNN 771

Query:   109 DNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSG--SE 166
             +N  N      ++ +N  +N  N   K  N D+ +N   N K   +K K+I++K     +
Sbjct:   772 NNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNDNNNNNNINNKKNKIKNKSIENKKDILDK 831

Query:   167 FGVNETCNGLHKCED-LKALIACIQNFDTGSGE--LTILVQNEGEKTLIVTITIPTAVEN 223
               +N+  N  +   D LK LI C + F+  + +  +T +++   EK  + T      +  
Sbjct:   832 KEINDEDNKSNDENDSLKILIPCFE-FEEFNFQPIITDMLEACIEKGDVQTCVFIVLILG 890

Query:   224 PLKQLKISKHQ 234
                 L I KH+
Sbjct:   891 RYMDLNIEKHR 901

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005053 "peroxisome matrix targeting signal-2 binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

GENEDB_PFALCIPARUM|PF14_0404 PF14_0404 "hypothetical protein" [Plasmodium falciparum (taxid:5833)]

 Score = 156 (60.0 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 49/170 (28%), Positives = 82/170 (48%)

Query:    14 SGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDD-KSNENGKSGGAKGKTNDDKRSETDNG 72
             +G +  S   +  ++    N KN   +E + D+  + E  K+  ++  T+D+  +E  NG
Sbjct:  1315 NGKNKSSQGNIDDNIMTEKNGKNNNSQENSDDNIMTEEYEKNKNSQENTDDNIMTEK-NG 1373

Query:    73 KIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETD-NGKN 131
             K    +E T D     +NGK+ ++ E+   D      N KN   +E +D +  T+ NGKN
Sbjct:  1374 KNKSSEENTDDNIMTEKNGKD-KSSEENANDNVMTEKNGKNKSSEENADDNIMTEKNGKN 1432

Query:   132 GGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCED 181
               ++E N DD     +NGKN   +E + D+    E+G N+  N     ED
Sbjct:  1433 KSSEE-NADDNIIREENGKNKSSQENSDDNIMTEEYGENK--NSHENSED 1479

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|Q8IL45 TREP "TRAP-related protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 156 (60.0 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 49/170 (28%), Positives = 82/170 (48%)

Query:    14 SGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDD-KSNENGKSGGAKGKTNDDKRSETDNG 72
             +G +  S   +  ++    N KN   +E + D+  + E  K+  ++  T+D+  +E  NG
Sbjct:  1315 NGKNKSSQGNIDDNIMTEKNGKNNNSQENSDDNIMTEEYEKNKNSQENTDDNIMTEK-NG 1373

Query:    73 KIGVGKEKTGDKSDETENGKNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETD-NGKN 131
             K    +E T D     +NGK+ ++ E+   D      N KN   +E +D +  T+ NGKN
Sbjct:  1374 KNKSSEENTDDNIMTEKNGKD-KSSEENANDNVMTEKNGKNKSSEENADDNIMTEKNGKN 1432

Query:   132 GGAKEKNTDDKSNEMDNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCED 181
               ++E N DD     +NGKN   +E + D+    E+G N+  N     ED
Sbjct:  1433 KSSEE-NADDNIIREENGKNKSSQENSDDNIMTEEYGENK--NSHENSED 1479

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0020011 "apicoplast" evidence=RCA

DICTYBASE|DDB_G0289971 med24 "putative mediator complex subunit 24" [Dictyostelium discoideum (taxid:44689)]

 Score = 152 (58.6 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 38/165 (23%), Positives = 62/165 (37%)

Query:    29 NGTDNRKNGGVKEKAIDDKSNENGKSGGAKGKTNDDKRSETDNGKIGVGKEKTGDKSDET 88
             N  +N  N        ++ +N N  +    G+++D K      G IG       D +DET
Sbjct:   970 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGESSD-KNEINPEGSIGSNNNNDNDNNDET 1028

Query:    89 ENG--KNGRAKEKPIADKTNVTDNEKNGGVKEKSDKSNETDNGKNGGAKEKNTDDKSNEM 146
                   N         D  NVTDN KN     K++ ++  +N  N      N ++ +N  
Sbjct:  1029 NTNTSSNNNNNNNNSNDNENVTDNNKNNNSNTKNNNNSNNNNNNNNNNNNNNNNNNNNNN 1088

Query:   147 DNGKNGGVKEKTIDDKSGSEFGVNETCNGLHKCEDLKALIACIQN 191
             +N  N        ++ + +    N   N   K +DL      I+N
Sbjct:  1089 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKKNKDLNLHGNIIEN 1133

GO:0016592 "mediator complex" evidence=ISS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GENEDB_PFALCIPARUM|MAL13P1.114 MAL13P1.114 "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 154 (59.3 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 58/190 (30%), Positives = 85/190 (44%)

Query:     2 DLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENG---KSGGAK 58
             ++++ + +KEN SG    +   +K   N  D +KN   K+K   DK   +G   K+   K
Sbjct:  2252 NVINKNDIKEN-SGDIKENSGDIKE--NSGDIKKNSSDKKKNSGDKKKNSGDIKKNSSDK 2308

Query:    59 GKTNDDKRSETDNGKIGVG--KEKTGD-KSDETENGKNGRAKEKPIAD-KTNVTDNEKNG 114
              K + DK+  + + KI     K+ + D K +  +  KN   K+K   D K N  D +KN 
Sbjct:  2309 KKNSSDKKINSGDKKINSDDIKKNSDDIKKNSDDIKKNSGDKKKNSGDIKKNSGDKKKNS 2368

Query:   115 GVKEKSDKSNETDNG----KNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDD---KSGSEF 167
             G  +K+   N   NG    KNG    KN D+     DN  N G  +   DD   K+G   
Sbjct:  2369 GDIKKNSSDNNIKNGDNNIKNGDNNIKNGDNDIKNDDNNINNGDNDIKNDDNNIKNGDNI 2428

Query:   168 --GVNETCNG 175
               G N   NG
Sbjct:  2429 KNGDNNINNG 2438

GO:0016020 "membrane" evidence=ISS

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|C0H5C8 MAL13P1.114 "Uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 154 (59.3 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 58/190 (30%), Positives = 85/190 (44%)

Query:     2 DLLSPSPVKENVSGTDFLSPSPVKTHVNGTDNRKNGGVKEKAIDDKSNENG---KSGGAK 58
             ++++ + +KEN SG    +   +K   N  D +KN   K+K   DK   +G   K+   K
Sbjct:  2252 NVINKNDIKEN-SGDIKENSGDIKE--NSGDIKKNSSDKKKNSGDKKKNSGDIKKNSSDK 2308

Query:    59 GKTNDDKRSETDNGKIGVG--KEKTGD-KSDETENGKNGRAKEKPIAD-KTNVTDNEKNG 114
              K + DK+  + + KI     K+ + D K +  +  KN   K+K   D K N  D +KN 
Sbjct:  2309 KKNSSDKKINSGDKKINSDDIKKNSDDIKKNSDDIKKNSGDKKKNSGDIKKNSGDKKKNS 2368

Query:   115 GVKEKSDKSNETDNG----KNGGAKEKNTDDKSNEMDNGKNGGVKEKTIDD---KSGSEF 167
             G  +K+   N   NG    KNG    KN D+     DN  N G  +   DD   K+G   
Sbjct:  2369 GDIKKNSSDNNIKNGDNNIKNGDNNIKNGDNDIKNDDNNINNGDNDIKNDDNNIKNGDNI 2428

Query:   168 --GVNETCNG 175
               G N   NG
Sbjct:  2429 KNGDNNINNG 2438

GO:0016020 "membrane" evidence=ISS

GO:0020011 "apicoplast" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT3G51580 unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 25 plant structures; EXPRESSED DURING- 15 growth stages; Has 1438 Blast hits to 1284 proteins in 200 species- Archae - 0; Bacteria - 339; Metazoa - 353; Fungi - 200; Plants - 269; Viruses - 37; Other Eukaryotes - 240 (source- NCBI BLink). (390 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	387
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	90.04
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	89.45
PHA03283	542	envelope glycoprotein E; Provisional	88.97
PF07213	79	DAP10: DAP10 membrane protein; InterPro: IPR009861	84.19

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=90.04  E-value=0.047  Score=46.69  Aligned_cols=23  Identities=26%  Similarity=0.309  Sum_probs=9.2

Q ss_pred             HHHHHHHhhhceeEEEeeccccc
Q 016558          291 FLILSVLIFGVTWACCKCRKRRW  313 (387)
Q Consensus       291 fLv~tvVliGgvwaCCkfRkrr~  313 (387)
                      |+||+++||..+.+||+++|||+
T Consensus         5 ~~iii~~i~l~~~~~~~~~rRR~   27 (130)
T PF12273_consen    5 FAIIIVAILLFLFLFYCHNRRRR   27 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            33433333333334444444443

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=89.45  E-value=0.11  Score=51.42  Aligned_cols=23  Identities=26%  Similarity=0.474  Sum_probs=0.0

Q ss_pred             HHHHHHhhhceeEEEeecccccC
Q 016558          292 LILSVLIFGVTWACCKCRKRRWN  314 (387)
Q Consensus       292 Lv~tvVliGgvwaCCkfRkrr~~  314 (387)
                      +|+++|||+++.|||.+||||.-
T Consensus       154 VI~~iLLIA~iIa~icyrrkR~G  176 (290)
T PF05454_consen  154 VIAAILLIAGIIACICYRRKRKG  176 (290)
T ss_dssp             -----------------------
T ss_pred             HHHHHHHHHHHHHHHhhhhhhcc
Confidence            45556667777788888877653

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

>PHA03283 envelope glycoprotein E; Provisional

Probab=88.97  E-value=0.77  Score=49.08  Aligned_cols=70  Identities=24%  Similarity=0.405  Sum_probs=38.4

Q ss_pred             hhHHHHHHHHhhhceeEEEeecccccCCCCCceeeec------CCCCccCCccc-c-cCCCcCCCCCCCCCcccCCCCCC
Q 016558          288 GAYFLILSVLIFGVTWACCKCRKRRWNDGVPYQELEM------GLPESVSAMNV-E-TAEGWDEGWDDDWDENNAVKSPG  359 (387)
Q Consensus       288 GAYfLv~tvVliGgvwaCCkfRkrr~~~GvpYQELEM------~LP~S~ga~ev-E-taDGWDdgWDDDWDDEEApKSPs  359 (387)
                      ++--++.++|+..++|+|+.||++++.   +|.=|-=      .||.-..-..+ | -+.-=||..|+|=|||-++.+|.
T Consensus       405 ~~~~~~~~~~~~l~vw~c~~~r~~~~~---~y~ilnpf~~vytslptn~~~~~~f~~~~~~~ddsf~~~~de~~~~~~~~  481 (542)
T PHA03283        405 AIICTCAALLVALVVWGCILYRRSNRK---PYEVLNPFETVYTSVPSNDPEVLVFERLASDSDDSFDSSSDEELEPPPPP  481 (542)
T ss_pred             HHHHHHHHHHHHHhhhheeeehhhcCC---cccccCCCccceeccCCCCCcccceeecccCccccccccccccccCCCCC
Confidence            333344556677789999998777665   4443332      24433332111 1 12223567777766666665555


Q ss_pred             C
Q 016558          360 A  360 (387)
Q Consensus       360 ~  360 (387)
                      .
T Consensus       482 ~  482 (542)
T PHA03283        482 G  482 (542)
T ss_pred             C
Confidence            3

>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins

Probab=84.19  E-value=0.38  Score=40.05  Aligned_cols=28  Identities=32%  Similarity=0.564  Sum_probs=23.3

Q ss_pred             HHHHHHhhhceeEEEeecccccC-CCCCc
Q 016558          292 LILSVLIFGVTWACCKCRKRRWN-DGVPY  319 (387)
Q Consensus       292 Lv~tvVliGgvwaCCkfRkrr~~-~GvpY  319 (387)
                      +++|+||+++++.|-++|||++| ++--|
T Consensus        44 ~vlTLLIv~~vy~car~r~r~~~~~~kvY   72 (79)
T PF07213_consen   44 AVLTLLIVLVVYYCARPRRRPTQEDDKVY   72 (79)
T ss_pred             HHHHHHHHHHHHhhcccccCCcccCCEEE
Confidence            57999999999999999999888 54333

In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	387
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	91.01
3lge_E	31	Sorting nexin-9; complex, glycolysis, actin dynami	86.81
2qsv_A	220	Uncharacterized protein; MCSG, structural genomics	81.86

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.01  E-value=2.6  Score=33.81  Aligned_cols=87  Identities=13%  Similarity=0.144  Sum_probs=62.1

Q ss_pred             cccCCCCccccccceeeeeeccCCCCcceEEEEEcCCCceEEEEEEcCccccCCCceeeecccceeEEEEEEecCC----
Q 016558          171 ETCNGLHKCEDLKALIACIQNFDTGSGELTILVQNEGEKTLIVTITIPTAVENPLKQLKISKHQTQKINISLSARK----  246 (387)
Q Consensus       171 eeCD~s~kC~d~~kmiACL~v~gn~S~~lsLLVQNkG~~~L~V~ItaPd~V~~~~~~L~L~K~qskKV~IS~s~~~----  246 (387)
                      -.|.+..-..+...-+-|...+-.......|+|+|.|.-+...++..+..+.+.+..-.|.-+++.+|+|++.-..    
T Consensus        17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~P~~g~L~pg~~~~i~V~F~P~~~g~~   96 (122)
T 2ys4_A           17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIEPAIGTLNVGESMQLEVEFEPQSVGDH   96 (122)
T ss_dssp             SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEEEEEECCTTEEEESSEEEECTTCEEEEEEEECCSSSBCC
T ss_pred             EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEEEEEecCCCeEEECCcCEECCCCEEEEEEEEEcCCCccE
Confidence            4454443333322344455555567788999999999999999998887888999999999999999999998322    


Q ss_pred             CceEEEEeccC
Q 016558          247 NSKLVLNAGNG  257 (387)
Q Consensus       247 s~~IvL~aGkG  257 (387)
                      ...|++...++
T Consensus        97 ~~~l~v~~~~g  107 (122)
T 2ys4_A           97 SGRLIVCYDTG  107 (122)
T ss_dssp             CCBCEEEESSS
T ss_pred             EEEEEEEECCC
Confidence            24455554443

>3lge_E Sorting nexin-9; complex, glycolysis, actin dynamics, LC4, hydrophobic pocket acetylation, lyase, phosphoprotein, schiff base; 2.20A {Oryctolagus cuniculus}

Probab=86.81  E-value=0.23  Score=34.04  Aligned_cols=12  Identities=58%  Similarity=1.498  Sum_probs=10.1

Q ss_pred             CCcCCCCCCCCC
Q 016558          339 EGWDEGWDDDWD  350 (387)
Q Consensus       339 DGWDdgWDDDWD  350 (387)
                      -|=|+.||||||
T Consensus         8 ~G~DDDWDdeWD   19 (31)
T 3lge_E            8 TGDDDDWDEDWD   19 (31)
T ss_pred             CCCccccccccc
Confidence            466889999999

>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}

Probab=81.86  E-value=6.9  Score=34.45  Aligned_cols=51  Identities=22%  Similarity=0.462  Sum_probs=43.2

Q ss_pred             CCCcceEEEEEcCCCceEEEEE-EcCccccCCCceeeecccceeEEEEEEec
Q 016558          194 TGSGELTILVQNEGEKTLIVTI-TIPTAVENPLKQLKISKHQTQKINISLSA  244 (387)
Q Consensus       194 n~S~~lsLLVQNkG~~~L~V~I-taPd~V~~~~~~L~L~K~qskKV~IS~s~  244 (387)
                      .+...+.+.+.|.|+.+|.++. .+|.++.....+-.|.-++...|+|+|..
T Consensus        18 g~~~~~~~~i~N~g~~pl~i~~~~~p~~~~~~~~~~~I~PG~~g~I~vt~~~   69 (220)
T 2qsv_A           18 EDEGVVRLVVNNTDESDLQVAVVSLPSFVSLDDRAFRLQAREPRELNLSLAV   69 (220)
T ss_dssp             TCCCEEEEEEEECSSSCEEEEEEECCTTEECSCCEEEECSSSCEEEEEEECC
T ss_pred             CCcceEEEEEEeCCCCceEEEeccCCCceEeeeCcceeCCCCceEEEEEEcc
Confidence            4556789999999999999997 47888888777788888999999999874

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00