Citrus Sinensis ID: 016618

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380------
Protein Sequence
MAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Secondary Structure (PSIPRED)
cccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccEEEEcccccccccccccccccccccccccHHccccEcccccc
Coil and Loop (DISEMBL)
maavsadqsVTEVRIVTntrfagksKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFThqqtwknsskssnpmfmdprnptwgwSWLERWMAarpwesrsatekepnndqssvksanRSIVAGEISKSFARYqlnsdklspttnqkisktpkhqspstptksasstvakktkpasprgsvsgldddsrsmvsvqsyrrhsiagssvrddeslptspsaprymvptesakaksrlqsplgvdkngtpekATLASAKkrlayppsparprrhsgppklessinLEISVTNGSS
Flexible Loop (DISEMBL)
maavsadqsvtevrivtntrfagkskeeaAAIRIQTAFRGYLARRALRALRGLVRLKLlmegpvvkrqaantlrcmqtLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFthqqtwknsskssnpmfmDPRNPTWGWSWLERWMAARPWEsrsatekepnndqssvksanrsIVAGEISKSFAryqlnsdklspttnqkisktpkhqspstptksasstvakktkpasprgsvsgldddsrsMVSVQSYRrhsiagssvrddeslptspsaprymvptesakaksrlqsplgvdkngtpekatlasakkrlayppsparprrhsgppklessinleisvtngss
Low Complexity Region (SEG)
MAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYlarralralrglvrlkllMEGPVVKRQAANTLRCMqtlsrlqsqirsrrvrMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQspstptksasstvakktkpasPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Disordered region (IsUnstruct)
************VRIVTNTRFAGK**EEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQT************************************************************************************************PTWGWSWLERWMAARP****************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
****************************AAAIRIQTAFRGYLARRALRALRGLVR****************TLRCMQTL***************************************************************************************************WSWLERWMAA******************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
**********TEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSF*************NPMFMDPRNPTWGWSWLERWMAARPW*********************RSIVAGEISKSFARYQLNSDKL*****************************************************************************SAPRYMV*************PLGVDKNGTPEKATLASAKKRLA***************KLESSINLEISVTNGSS
Disordered Region (DISPRO)
****SADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAM**GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKN**************PTWGWSWLERWMAARPWE**************************************************************************************************************************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNGSS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	386	2.2.26 [Sep-21-2011]
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.883	0.751	0.551	2e-91
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.733	0.423	0.353	4e-37
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.360	0.236	0.327	2e-13
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.300	0.146	0.268	1e-10

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score =  336 bits (862), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 245/372 (65%), Gaps = 31/372 (8%)

Query: 15  IVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLR 74
           IV N RFAGKSKEEAAAI IQ+ FRG+LARR  + +RG  RLKLLMEG VV+RQAA TL+
Sbjct: 96  IVVN-RFAGKSKEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLK 154

Query: 75  CMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVEAN 133
           CMQTLSR+QSQIRSRR+RMSEENQA  +QLLQKHAKEL  ++ G  W+ S QSKEQVEA 
Sbjct: 155 CMQTLSRVQSQIRSRRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYSNQSKEQVEAG 214

Query: 134 LLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWES 193
           +L KYEATMRRERA+AY+FTHQQ  K+ SK++NPMFMDP NPTWGWSWLERWMA RPWES
Sbjct: 215 MLHKYEATMRRERALAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPWES 274

Query: 194 RSATEKEPNNDQSSVK-SANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPS 252
               +   NND SSVK S NR+   GE +KS  R +LNS                   P+
Sbjct: 275 SEKEQNTTNNDNSSVKNSTNRNSQGGETAKSSNRNKLNSS----------------TKPN 318

Query: 253 TPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPS 312
           TP  SASST  +  +   P  S            S +  RR SIA  SV DDE+L +S +
Sbjct: 319 TP--SASSTATRNPRKKRPIPSSIKSKSSDDEAKSSERNRRPSIARPSVSDDETL-SSST 375

Query: 313 APR--YMVPTESA---KAKSRLQSPLGVDKNGTPEKATL---ASAKKRLAYPPSPA-RPR 363
           A R   ++PT  +   K KS+  S + V  + T E + L   A AKKRL+   SPA +PR
Sbjct: 376 ARRSSNLIPTTKSARGKPKSQTSSRVAVTTSTTEESSILPEKAPAKKRLSTSASPAPKPR 435

Query: 364 RHSGPPKLESSI 375
           R S PPK+E  +
Sbjct: 436 RSSAPPKVEKGV 447

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score =  155 bits (393), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 183/334 (54%), Gaps = 51/334 (15%)

Query: 27  EEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQI 86
           + A+A +IQ AFRGY+AR++ RAL+GLVRL+ ++ G  VKRQ  N ++ MQ + R+QSQI
Sbjct: 321 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQI 380

Query: 87  RSRRVRMSEENQALQRQLLQKHAKELAMQMG-EEWDDSIQSKEQVEANLLSKYEATMRRE 145
           +SRR++M  ENQA   Q+ +  AK  A + G + WDDS+ +KE+ ++    K +A ++RE
Sbjct: 381 QSRRIKM-LENQA---QVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRE 436

Query: 146 RAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PTWGWSWLERWMAARPWESRSATEKEPNND 204
           R+MAY+++ ++ WKNS KS+     D R+ P W W+W++R     P  S + +  +P  D
Sbjct: 437 RSMAYAYS-RKLWKNSPKSTQ----DNRSFPQW-WNWVDR---QNPLASPAPSYSQPQRD 487

Query: 205 QSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSPSTPTKSASSTVAK 264
                S    +    +S+S  ++ +  D    T+  + S++  H +PS P  + +S  + 
Sbjct: 488 FRLTPS---RLCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFH-TPSRPIHTGTSRYS- 542

Query: 265 KTKPASPRGSVSGLDDDSRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAK 324
                  RG + G D                   S  +DD+SL + P  P YM PT SAK
Sbjct: 543 -------RGRLRGQD-------------------SPFKDDDSLTSCPPFPSYMAPTVSAK 576

Query: 325 AKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPS 358
           AK R  S       GTP      S K+R++YPP+
Sbjct: 577 AKVRPNSNPKERVMGTP-----VSEKRRMSYPPT 605

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 77.0 bits (188), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 29/168 (17%)

Query: 28  EAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIR 87
           E AA  +Q AFRGYLARRA  AL+G++RL+ L+ G +V+RQA  TL  +  + RLQ+  R
Sbjct: 113 EIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFAR 172

Query: 88  SRRVRMSEENQALQR----QLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMR 143
            R +R S+    + R    QLLQ +                         L +  +A + 
Sbjct: 173 GREIRKSDIGVQVYRKCRLQLLQGN------------------------KLANPTDAYLG 208

Query: 144 RERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPW 191
            ++  A +F  Q+   +S K       D  NP     WLE W A+  W
Sbjct: 209 IKKLTANAFA-QKLLASSPKVLPVHAYDTSNPNSNLIWLENWSASCFW 255

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 59/175 (33%)

Query: 27  EEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQI 86
           +E+  + IQ A RG+LARR L   + +++L+  + G +V+ QA  +LRC+Q + ++Q+ +
Sbjct: 214 DESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMV 273

Query: 87  RSR-------RVRM----SEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLL 135
           R+R       RV      SE N A Q+ L  K AK L                       
Sbjct: 274 RARHSTKDGSRVSATSDKSEPNAAAQKLLENKFAKHLM---------------------- 311

Query: 136 SKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFM--DPRNPTWGWSWLERWMAA 188
                                    S+  + P+ +  DP  P+  W+WLERWM+ 
Sbjct: 312 ------------------------ESTPKTKPINIKCDPTKPSSAWNWLERWMSV 342

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	386
224140165	472	predicted protein [Populus trichocarpa]	0.989	0.809	0.688	1e-149
255568402	466	calmodulin binding protein, putative [Ri	0.963	0.798	0.732	1e-149
224069348	479	predicted protein [Populus trichocarpa]	0.974	0.784	0.697	1e-148
356545965	470	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.963	0.791	0.678	1e-141
225439898	479	PREDICTED: protein IQ-DOMAIN 1-like [Vit	0.994	0.801	0.682	1e-137
357510601	468	IQ domain-containing protein [Medicago t	0.974	0.803	0.706	1e-136
356572413	477	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.974	0.788	0.695	1e-133
225449126	482	PREDICTED: protein IQ-DOMAIN 1-like [Vit	0.935	0.748	0.696	1e-133
356537501	474	PREDICTED: protein IQ-DOMAIN 1-like [Gly	0.979	0.797	0.661	1e-132
147809623	482	hypothetical protein VITISV_018782 [Viti	0.935	0.748	0.691	1e-132

>gi|224140165|ref|XP_002323455.1| predicted protein [Populus trichocarpa] gi|222868085|gb|EEF05216.1| predicted protein [Populus trichocarpa]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/388 (68%), Positives = 321/388 (82%), Gaps = 6/388 (1%)

Query: 2   AAVSADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLME 61
           A  +   ++  V++    ++AGKSKEE AAI+IQT FRGY+ARRALRALRGL RLK LME
Sbjct: 83  APTTVQTNIEVVQLTKVNKYAGKSKEEEAAIKIQTTFRGYMARRALRALRGLARLKFLME 142

Query: 62  GPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA-MQMGEEW 120
           GP +KRQA +TLRCMQTL+R+QSQI +RR+RMSEENQALQRQLLQKHAKEL  +++GEEW
Sbjct: 143 GPRIKRQATHTLRCMQTLARVQSQIHTRRIRMSEENQALQRQLLQKHAKELENLRIGEEW 202

Query: 121 DDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWS 180
           DDS+QSKEQ+EA+LL+K+EA  RRERA+AY+F+HQQT KNSS+S+NPMFM+  NP+WGWS
Sbjct: 203 DDSLQSKEQIEASLLNKFEAATRRERALAYAFSHQQTLKNSSRSANPMFMNG-NPSWGWS 261

Query: 181 WLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQ 240
           WLERWMAA PWESRS  EKE NND SSVKSA+RSI  GEISKS+ARYQLNSDKL+P  ++
Sbjct: 262 WLERWMAAHPWESRSLMEKEHNNDHSSVKSASRSITGGEISKSYARYQLNSDKLTPRESE 321

Query: 241 KISKTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAG 298
           + +KT   QSPSTP K A+STVA+K K ASPR ++ G++DDSRSMVSVQS   RRHSIAG
Sbjct: 322 RPTKTTNLQSPSTPKKPAASTVARKLKSASPRSNIGGIEDDSRSMVSVQSDRSRRHSIAG 381

Query: 299 SSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASA--KKRLAYP 356
           S VRDDESL +SP+ P YMVPT+SA+AKSR+ S LG +K+GTPEK   +S   KKRL+YP
Sbjct: 382 SFVRDDESLGSSPALPSYMVPTQSARAKSRIHSLLGAEKDGTPEKEKGSSGHTKKRLSYP 441

Query: 357 PSPARPRRHSGPPKLESSINLEISVTNG 384
           PSPA+ RR+SGPPKLESS N   SV  G
Sbjct: 442 PSPAKGRRYSGPPKLESSFNARNSVAAG 469

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568402|ref|XP_002525175.1| calmodulin binding protein, putative [Ricinus communis] gi|223535472|gb|EEF37141.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/377 (73%), Positives = 321/377 (85%), Gaps = 5/377 (1%)

Query: 13  VRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANT 72
           VR+V   +FAGKS EE AAI+IQTAF+GYLARRALRALRGL RLK LMEGP +KRQA +T
Sbjct: 88  VRVVKVNKFAGKSGEEMAAIKIQTAFKGYLARRALRALRGLGRLKSLMEGPTIKRQATHT 147

Query: 73  LRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVE 131
           LRCMQTL+R+QSQI SRR+RMSEENQALQRQLLQKHA+EL  ++MGEEWDDS+QSKEQ+E
Sbjct: 148 LRCMQTLARVQSQIHSRRIRMSEENQALQRQLLQKHAQELEKLRMGEEWDDSLQSKEQIE 207

Query: 132 ANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPW 191
           ANLL+KYEA MRRERA+AYSFTHQQTWKNSS+S+NP+FM   NPTWGWSWLERWMAA PW
Sbjct: 208 ANLLNKYEAAMRRERALAYSFTHQQTWKNSSRSANPIFMSSSNPTWGWSWLERWMAAHPW 267

Query: 192 ESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQSP 251
           E    TEKE +ND SSVK+A+RS+V GEISKS+ARYQLNSDKLSP  ++K+ +    +SP
Sbjct: 268 EKGGMTEKELSNDHSSVKTASRSMVGGEISKSYARYQLNSDKLSPAESEKVRQAMSPRSP 327

Query: 252 STPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDESLPT 309
            TP+K  SST+A+K K ASPR S+ G DDD+RS++S+QS  YRRHSIAGSSVRDDESL +
Sbjct: 328 LTPSKPGSSTIARKLKSASPRSSIGGADDDNRSIISMQSDRYRRHSIAGSSVRDDESLGS 387

Query: 310 SPSAPRYMVPTESAKAKSRLQSPLGVDKNGT--PEKATLASAKKRLAYPPSPARPRRHSG 367
           S + P YMVPTESA+AKSRLQSPLGVDKNGT   EK  L  AKKRL+YPPSPARPRR  G
Sbjct: 388 SSAVPSYMVPTESARAKSRLQSPLGVDKNGTSEKEKGPLGPAKKRLSYPPSPARPRRQLG 447

Query: 368 PPKLESSINLEISVTNG 384
           P K+ES++N EI+VTNG
Sbjct: 448 PRKMESNLNAEIAVTNG 464

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069348|ref|XP_002326336.1| predicted protein [Populus trichocarpa] gi|222833529|gb|EEE72006.1| predicted protein [Populus trichocarpa]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/383 (69%), Positives = 316/383 (82%), Gaps = 7/383 (1%)

Query: 8   QSVTEVRIVTNT-RFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVK 66
           Q+ TEV   T   ++AGKSKEE AAI+IQTAFRGY+ARRALRALRGL RLK LMEGP +K
Sbjct: 95  QTTTEVFQPTKVNKYAGKSKEEVAAIKIQTAFRGYMARRALRALRGLFRLKSLMEGPTIK 154

Query: 67  RQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQ 125
           RQA +TL CMQTL+R+QSQI +RR+RMSEENQALQRQLL +HAKE  ++Q+GEEWDDS+Q
Sbjct: 155 RQATHTLHCMQTLARVQSQIHTRRIRMSEENQALQRQLLHEHAKEFESLQIGEEWDDSLQ 214

Query: 126 SKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERW 185
           SKEQ+EANLL+K+EA +RRERA+AYSF+HQQ WK SS++ NPMFM   NP+WGWSWLERW
Sbjct: 215 SKEQIEANLLNKFEAAVRRERALAYSFSHQQAWKISSRAVNPMFMS-GNPSWGWSWLERW 273

Query: 186 MAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKT 245
           MAA PWESRS TEKE NND SS+KSA+RSI  G+ISKS+ARYQLNSDKL+P  +++ +KT
Sbjct: 274 MAAHPWESRSMTEKELNNDHSSLKSASRSITGGDISKSYARYQLNSDKLTPRESERPTKT 333

Query: 246 PKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRD 303
              Q  STP K A+STVA+K K ASPR  + GLDD+S+S+VSVQS   RRHSIAGS VRD
Sbjct: 334 ANLQFQSTPNKPAASTVARKLKSASPRSGIGGLDDESKSVVSVQSDHSRRHSIAGSFVRD 393

Query: 304 DESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP--EKATLASAKKRLAYPPSPAR 361
           DESL +SP  P YMVPTESA+AKSRLQ+PLG + NG P  EK +L SAKKRL+YPPSPA+
Sbjct: 394 DESLGSSPPLPSYMVPTESARAKSRLQNPLGAEMNGAPEKEKGSLGSAKKRLSYPPSPAK 453

Query: 362 PRRHSGPPKLESSINLEISVTNG 384
            RR+SGPPKLESS+  E S   G
Sbjct: 454 ARRYSGPPKLESSLKAENSEAAG 476

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545965|ref|XP_003541403.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/379 (67%), Positives = 302/379 (79%), Gaps = 7/379 (1%)

Query: 9   SVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQ 68
           +  EV+  T  +F  K  EE AAIRIQ AFRGYLARR LRALRGLVRL+ LMEGPVVKRQ
Sbjct: 93  AAAEVQATTTVQFNSKPTEEVAAIRIQKAFRGYLARRELRALRGLVRLRSLMEGPVVKRQ 152

Query: 69  AANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDSIQSK 127
           A +TLR MQT + LQ+QIRSRR+RM EENQ LQ+QLLQKHAKEL ++++GEEWDDSIQSK
Sbjct: 153 AISTLRSMQTFAHLQTQIRSRRLRMLEENQELQKQLLQKHAKELESIRLGEEWDDSIQSK 212

Query: 128 EQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMA 187
           EQVEA LLSKYEA MRRERAMAYSF+HQQ WKN+S+S NPMFMDP NP WGWSWLERWMA
Sbjct: 213 EQVEAKLLSKYEAAMRRERAMAYSFSHQQNWKNASRSVNPMFMDPTNPAWGWSWLERWMA 272

Query: 188 ARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPK 247
           ARPWES S  EKE  ND  S++S++R I + EISKSFA++QLNS+K SPT +Q    +P 
Sbjct: 273 ARPWESHSLMEKE-KNDNKSLRSSSRGITSAEISKSFAKFQLNSEKHSPTASQNPG-SPN 330

Query: 248 HQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQSY--RRHSIAGSSVRDDE 305
            +S S P K +S  VA+K K ASP+  +  +DD ++SMVSVQS   RRHSIAGS V DDE
Sbjct: 331 FESHSNPPKPSSPAVARKLKKASPK-DILAIDDGTKSMVSVQSERPRRHSIAGSIVGDDE 389

Query: 306 SLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRH 365
           SL +SPS P YMVPT+SAKAKSR+QSP   + NGTP+K +  +AKKRL++P SPARPRRH
Sbjct: 390 SLASSPSIPSYMVPTKSAKAKSRMQSPFAAE-NGTPDKGSSGTAKKRLSFPASPARPRRH 448

Query: 366 SGPPKLESSINLEISVTNG 384
           SGPPK+ESS N EI+V NG
Sbjct: 449 SGPPKVESSFNAEITVGNG 467

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439898|ref|XP_002279479.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/391 (68%), Positives = 318/391 (81%), Gaps = 7/391 (1%)

Query: 1   MAAVSADQSVTEV-RIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLL 59
           MA++   ++  EV  I T T+  GK+KEEAAAI+IQTAFRGYLARRALRALRGLVRL+ L
Sbjct: 84  MASLDVPETDVEVVEITTLTQSTGKAKEEAAAIKIQTAFRGYLARRALRALRGLVRLQSL 143

Query: 60  MEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA-MQMGE 118
           ++G  VKRQAANTLRCMQTL+R+QSQI  RR+RMSEENQALQRQLLQK AKE   ++MGE
Sbjct: 144 IQGTAVKRQAANTLRCMQTLARVQSQICYRRIRMSEENQALQRQLLQKQAKEFEQLKMGE 203

Query: 119 EWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWG 178
           EWDDS+QSKEQ+EA LL+K  A MRRERA+AY+F+HQQ WKNSSKS+N +FMDP NP WG
Sbjct: 204 EWDDSLQSKEQIEAGLLNKQGAAMRRERALAYAFSHQQAWKNSSKSTNLLFMDPSNPHWG 263

Query: 179 WSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTT 238
           WSWLERWMAARPWESRS T+KE NNDQ S+KS +RSI  GEI+K++AR+ L+S K SPT 
Sbjct: 264 WSWLERWMAARPWESRSTTDKELNNDQLSIKSGSRSITGGEITKAYARHLLDSSKPSPTA 323

Query: 239 NQKISKTPKHQSPSTP--TKSASSTVAKKTKP-ASPRGSVSGLDDDSRSMVSVQS--YRR 293
           +QK    P  QSPSTP     +SS+ A K KP ASPRG++ G DDD++SMVS+QS  +RR
Sbjct: 324 SQKPYHPPARQSPSTPPSKAVSSSSAAGKFKPAASPRGNLWGQDDDTKSMVSIQSERFRR 383

Query: 294 HSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRL 353
           HSIAGSSV DDESL +SP+ P YM PT+SAKAKSRLQSPLG++ NGTPEK +   AKKRL
Sbjct: 384 HSIAGSSVGDDESLASSPAVPSYMAPTKSAKAKSRLQSPLGLENNGTPEKGSSGIAKKRL 443

Query: 354 AYPPSPARPRRHSGPPKLESSINLEISVTNG 384
           ++P SPARPRRHSGPP++ESS   E  V+NG
Sbjct: 444 SFPASPARPRRHSGPPRVESSSLTEGIVSNG 474

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510601|ref|XP_003625589.1| IQ domain-containing protein [Medicago truncatula] gi|355500604|gb|AES81807.1| IQ domain-containing protein [Medicago truncatula] gi|388521149|gb|AFK48636.1| unknown [Medicago truncatula]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/385 (70%), Positives = 317/385 (82%), Gaps = 9/385 (2%)

Query: 5   SADQSVTEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPV 64
           S   +V + +  T +RFAGK K+E AAI+IQTAFRGYLARRALRALRGLVRLK LMEGP 
Sbjct: 85  SVQTAVVKTQAATVSRFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPA 144

Query: 65  VKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKEL-AMQMGEEWDDS 123
           VKRQA +TLR MQTL+R+QSQIRSRRVRM EENQALQRQLLQKHAKEL  M++GEEWDDS
Sbjct: 145 VKRQAMSTLRSMQTLARVQSQIRSRRVRMLEENQALQRQLLQKHAKELETMRIGEEWDDS 204

Query: 124 IQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLE 183
           +QSKEQ+EA LLSKYEATMRRERA+AY+FTHQQ  KNSS+S NPMF+DP NPTWGWSW+E
Sbjct: 205 LQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNSKNSSRSMNPMFVDPTNPTWGWSWIE 264

Query: 184 RWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKIS 243
           RWMAARPWESR   +KE  ND SSVKS++RSI+ GEISKSFAR+QLNS+  SP  +Q   
Sbjct: 265 RWMAARPWESRGLVDKE-LNDHSSVKSSSRSIIGGEISKSFARFQLNSEIHSPVASQN-P 322

Query: 244 KTPKHQSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSV 301
            +P  QS STPTK AS++VA+K K ASP+GS   +DDDS+SM SVQS  +RRHSIAGSSV
Sbjct: 323 GSPSFQSNSTPTKPASASVARKLKKASPKGSWV-MDDDSKSMASVQSDRFRRHSIAGSSV 381

Query: 302 RDDESLPTSPSAPRYMVPTESAKAKSRL--QSPLGVDKNGTPEKATLASAKKRLAYPPSP 359
           RDDESL +SPS P YMVPT+SAKA+ R   QSPL   +NG  EK +  +AKKRL++P SP
Sbjct: 382 RDDESLASSPSVPSYMVPTQSAKARLRTQSQSPLA-KENGKQEKGSFGTAKKRLSFPASP 440

Query: 360 ARPRRHSGPPKLESSINLEISVTNG 384
           ARPRRHSGPPK+E++IN E+ V NG
Sbjct: 441 ARPRRHSGPPKVETAINAELPVPNG 465

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572413|ref|XP_003554363.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 274/394 (69%), Positives = 320/394 (81%), Gaps = 18/394 (4%)

Query: 3   AVSADQSVTEVRI-------VTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVR 55
           A+ A++ V  V+I            FAGK K+E AAI+IQTAFRGYLARRALRALRGLVR
Sbjct: 87  AMDAEELVPSVQIEPVRVEAALIAHFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVR 146

Query: 56  LKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKEL-AM 114
           LKLLMEGPVVKRQA +TLR MQTLSRLQSQIRSRR+RM EENQALQRQLLQKHA+EL ++
Sbjct: 147 LKLLMEGPVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESL 206

Query: 115 QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 174
           +MGEEWDDS+QSKEQ+EA LLSKYEATMRRERA+AY+FTHQQ WKNSS+S NPMFMDP N
Sbjct: 207 RMGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNWKNSSRSVNPMFMDPTN 266

Query: 175 PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 234
           P+WGWSWLERWMAARPWESRS  +KE  ND SS++S++RSI  GEISKSFAR+QLNS+K 
Sbjct: 267 PSWGWSWLERWMAARPWESRSHMDKE-LNDHSSIRSSSRSITGGEISKSFARFQLNSEKH 325

Query: 235 SPTTNQKISKTPKHQSPSTPTKSASSTVAKKTKPA-SPRGSVSGLDDDSRSMVSVQS--Y 291
           SPT +Q    +P  Q  STP+K ASS+  K  K + SPRGS   +D+DS+S+VSV S  +
Sbjct: 326 SPTASQNPG-SPSFQ--STPSKPASSSAKKPKKVSPSPRGSWV-MDEDSKSLVSVHSDRF 381

Query: 292 RRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKK 351
           RRHSIAGSSVRDDESL +SP+ P YMVPT+SAKAKSR QSPL   +N   EK +  SAKK
Sbjct: 382 RRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLA-SENAKAEKGSFGSAKK 440

Query: 352 RLAYPPSPARPRRHSGPPKLE-SSINLEISVTNG 384
           RL++P SPARPRRHSGPPK+E SS+N E++V  G
Sbjct: 441 RLSFPASPARPRRHSGPPKVESSSLNAELAVDKG 474

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449126|ref|XP_002277282.1| PREDICTED: protein IQ-DOMAIN 1-like [Vitis vinifera]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/369 (69%), Positives = 299/369 (81%), Gaps = 8/369 (2%)

Query: 14  RIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTL 73
           R+ T TRF+GKSKEE AAI+IQTAFRGYLARRALRALRGLVRLK L++G  VKRQA  TL
Sbjct: 103 RLTTVTRFSGKSKEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTL 162

Query: 74  RCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA---MQMGEEWDDSIQSKEQV 130
           RCMQTL+R+QSQIR+RR+RMSEEN ALQRQL  K  KEL      MG++WDDS+QSKEQ+
Sbjct: 163 RCMQTLARVQSQIRARRIRMSEENLALQRQLQLKRDKELEKLRASMGDDWDDSVQSKEQI 222

Query: 131 EANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARP 190
           EANL SK EA +RRERA+AY+F+HQQTWKNSSK +NP FMDP NP WGWSWLERWMAARP
Sbjct: 223 EANLQSKQEAAVRRERALAYAFSHQQTWKNSSKPANPTFMDPNNPHWGWSWLERWMAARP 282

Query: 191 WESRSATEKEPNNDQSSVKS-ANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQ 249
           WESRSA EKE N D +S+KS  +R+   GEISK++AR  LN DK    T QK S+ P  Q
Sbjct: 283 WESRSAMEKELNTDHASLKSTTSRAFSIGEISKAYARRDLNLDKKPSPTAQKPSRPPSRQ 342

Query: 250 SPSTPTKSA--SSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDE 305
           SPSTP   A  SS+V  KTKPASP+GS  G DDDSRSM+S+QS  YRRHSIAGS VRDDE
Sbjct: 343 SPSTPPSKAQSSSSVTGKTKPASPKGSGWGADDDSRSMLSIQSERYRRHSIAGSLVRDDE 402

Query: 306 SLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRH 365
           SL +SP+ P YM  TES +A+SRL SPLG++KNGTPEKA+ +SAKKRL++P SPA PRRH
Sbjct: 403 SLASSPAVPSYMASTESTRARSRLPSPLGLEKNGTPEKASGSSAKKRLSFPASPAGPRRH 462

Query: 366 SGPPKLESS 374
           SGPP++E+S
Sbjct: 463 SGPPRVETS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537501|ref|XP_003537265.1| PREDICTED: protein IQ-DOMAIN 1-like [Glycine max]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/396 (66%), Positives = 309/396 (78%), Gaps = 18/396 (4%)

Query: 3   AVSADQSV-------TEVRIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVR 55
           AV A++ V        EV+  T  +F  K  EE AAIRIQ AFRGYLARRALRALRGLVR
Sbjct: 80  AVDAEEPVLAVQTAAAEVQATTIVQFDNKPTEEMAAIRIQKAFRGYLARRALRALRGLVR 139

Query: 56  LKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKEL-AM 114
           L+ LMEGPVVKRQA +TLR MQT + LQ+QIRSRR+RM EENQALQ+QLLQKHAKEL +M
Sbjct: 140 LRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEENQALQKQLLQKHAKELESM 199

Query: 115 QMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN 174
           ++GEEWDDS+QSKEQVEA LLSKYEA+MRRERAMAYSF+HQ  WKN+S+S NPMFMDP N
Sbjct: 200 RLGEEWDDSVQSKEQVEAKLLSKYEASMRRERAMAYSFSHQHNWKNASRSINPMFMDPTN 259

Query: 175 PTWGWSWLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKL 234
           P WGWSWLERW AARPWES S  EKE N ++ S++S++R I + EISK+FA++QLNS+K 
Sbjct: 260 PAWGWSWLERWTAARPWESHSQMEKEKNGNK-SLRSSSRGITSAEISKAFAKFQLNSEKH 318

Query: 235 SPTTNQKISKTPKH----QSPSTPTKSASSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS 290
           SPT +Q    +P      QS S P K  S  VAKK K ASP+  +  +DDD++SM+SVQS
Sbjct: 319 SPTASQNPG-SPNFESHSQSHSNPPKPPSPAVAKKLKKASPK-DILAIDDDTKSMISVQS 376

Query: 291 Y--RRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLAS 348
              RRHSIAGS V DDESL +SPS P YMVPT+SAKAKSR+QSPL  +  GTPEK +  +
Sbjct: 377 ERPRRHSIAGSIVGDDESLASSPSIPSYMVPTKSAKAKSRMQSPLAAE-YGTPEKGSSGT 435

Query: 349 AKKRLAYPPSPARPRRHSGPPKLESSINLEISVTNG 384
           AKKRL++P SPARPRRHSGPPK+ESS N EI+V NG
Sbjct: 436 AKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNG 471

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147809623|emb|CAN66644.1| hypothetical protein VITISV_018782 [Vitis vinifera]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/369 (69%), Positives = 299/369 (81%), Gaps = 8/369 (2%)

Query: 14  RIVTNTRFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTL 73
           R+ T TRF+GKSKEE AAI+IQTAFRGYLARRALRALRGLVRLK L++G  VKRQA  TL
Sbjct: 103 RLTTVTRFSGKSKEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLIQGQSVKRQATTTL 162

Query: 74  RCMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELA---MQMGEEWDDSIQSKEQV 130
           RCMQTL+R+QSQIR+RR+RMSEEN ALQRQL  K  KEL      +G++WDDS+QSKEQ+
Sbjct: 163 RCMQTLARVQSQIRARRIRMSEENLALQRQLQLKRDKELEKLRASIGDDWDDSVQSKEQI 222

Query: 131 EANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARP 190
           EANL SK EA +RRERA+AY+F+HQQTWKNSSK +NP FMDP NP WGWSWLERWMAARP
Sbjct: 223 EANLQSKQEAAVRRERALAYAFSHQQTWKNSSKPANPTFMDPNNPHWGWSWLERWMAARP 282

Query: 191 WESRSATEKEPNNDQSSVKS-ANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQ 249
           WESRSA EKE N D +S+KS  +R+   GEISK++AR  LN DK    T QK S+ P  Q
Sbjct: 283 WESRSAMEKELNTDHASLKSTTSRAFSIGEISKAYARRDLNLDKKPSPTAQKPSRPPSRQ 342

Query: 250 SPSTPTKSA--SSTVAKKTKPASPRGSVSGLDDDSRSMVSVQS--YRRHSIAGSSVRDDE 305
           SPSTP   A  SS+V  KT+PASP+GS  G DDDSRSM+S+QS  YRRHSIAGS VRDDE
Sbjct: 343 SPSTPPSKAQSSSSVTGKTRPASPKGSGWGADDDSRSMLSIQSEWYRRHSIAGSLVRDDE 402

Query: 306 SLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRH 365
           SL +SP+ P YM  TES +A+SRL SPLG++KNGTPEKA+ +SAKKRL++P SPA PRRH
Sbjct: 403 SLASSPAVPSYMASTESTRARSRLPSPLGLEKNGTPEKASGSSAKKRLSFPASPAGPRRH 462

Query: 366 SGPPKLESS 374
           SGPP++E+S
Sbjct: 463 SGPPRVETS 471

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	386
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.919	0.770	0.531	2.8e-89
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.619	0.555	0.449	2.9e-66
TAIR|locus:2066226	527	Iqd4 "AT2G26410" [Arabidopsis	0.937	0.686	0.307	1.2e-35
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.432	0.401	0.357	2.4e-28
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.544	0.497	0.355	3.9e-28
TAIR|locus:2043959	669	IQD14 "AT2G43680" [Arabidopsis	0.533	0.307	0.285	5.1e-24
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.479	0.703	0.329	2.9e-23
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.538	0.402	0.288	9.8e-21
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.932	0.674	0.240	2.3e-20
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.479	0.714	0.302	1.9e-19

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 201/378 (53%), Positives = 234/378 (61%)

Query:    13 VRIVTNTRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANT 72
             VR  T TRFAGKS EEAAAI IQT FRGY                  MEG VVKRQAANT
Sbjct:   100 VRRATPTRFAGKSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANT 159

Query:    73 LRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVE 131
             L+CM                MSEENQA Q+QLLQKHAKELA ++ G+ W+DSIQSKE+VE
Sbjct:   160 LKCMQTLSRVQSQIRARRIRMSEENQARQKQLLQKHAKELAGLKNGDNWNDSIQSKEKVE 219

Query:   132 ANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPW 191
             ANLLSKYEATMRRERA+AYS++HQQ WKN+SKS NPMFMDP NPTWGWSWLERWMA RP 
Sbjct:   220 ANLLSKYEATMRRERALAYSYSHQQNWKNNSKSGNPMFMDPSNPTWGWSWLERWMAGRPL 279

Query:   192 ESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKHQXX 251
             ES    +   NND ++  S   SI   E +KS  R    +    P T      TP+++  
Sbjct:   280 ESSEKEQSNSNNDNAA--SVKGSINRNEAAKSLTR----NGSTQPNTPSSARGTPRNKNS 333

Query:   252 XXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSMVSVQSYR--RHSIAGSSVRDDESLPT 309
                                 + S    DDDS+S +SV S R  RHSIAGSSVRDDESL  
Sbjct:   334 FFSPPTPSRLN---------QSSRKSNDDDSKSTISVLSERNRRHSIAGSSVRDDESLAG 384

Query:   310 SPSAPRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPA--RPRRHSG 367
             SP+ P YMVPT+SA+A+ + QSPLG            ASAKKRL+YP SPA  +PRR S 
Sbjct:   385 SPALPSYMVPTKSARARLKPQSPLGGTTQENEGFTDKASAKKRLSYPTSPALPKPRRFSA 444

Query:   368 PPKLESSINLEISVTNGS 385
             PPK+ES     ++VTNG+
Sbjct:   445 PPKVESG---GVTVTNGA 459

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
 Identities = 111/247 (44%), Positives = 148/247 (59%)

Query:     2 AAVSADQSVTEV-RIVTNTRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXM 60
             AAV+A Q+  EV R+   +RF GKS EE AAI+IQTAFRGY                  +
Sbjct:    81 AAVAAAQAAAEVVRLSALSRFPGKSMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLV 140

Query:    61 EGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQKHAKELAMQMGEEW 120
             +G  V+RQA +TL+ M                +SE+ QAL RQL QKH K+   + GE W
Sbjct:   141 QGKCVRRQATSTLQSMQTLARVQYQIRERRLRLSEDKQALTRQLQQKHNKDFD-KTGENW 199

Query:   121 DDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWS 180
             +DS  S+E+VEAN+L+K  ATMRRE+A+AY+F+HQ TWKNS+K  +  FMDP NP WGWS
Sbjct:   200 NDSTLSREKVEANMLNKQVATMRREKALAYAFSHQNTWKNSTKMGSQTFMDPNNPHWGWS 259

Query:   181 WLERWMAARPWESRSATEKEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQ 240
             WLERWMAARP E+ S T   P+N +    S+ RS+ +  +S+   R + N      T N 
Sbjct:   260 WLERWMAARPNENHSLT---PDNAEKD--SSARSVASRAMSEMIPRGK-NLSPRGKTPNS 313

Query:   241 KISKTPK 247
             +   +P+
Sbjct:   314 RRGSSPR 320

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2066226 Iqd4 "AT2G26410" [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 121/393 (30%), Positives = 181/393 (46%)

Query:     2 AAVSADQSVTEV-RIVT-NTRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXX 59
             AAV A  +  EV R+ T +T    +SKEE AAI+IQ A+R Y                  
Sbjct:   120 AAVVAAHAAAEVIRLTTPSTPQIEESKEETAAIKIQNAYRCYTARRTLRALRGMARLKSL 179

Query:    60 MEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQK-HAKELAMQM-- 116
             ++G  VKRQ    L  M                +S EN+   R + QK H KE    +  
Sbjct:   180 LQGKYVKRQMNAMLSSMQTLTRLQTQIQERRNRLSAENKTRHRLIQQKGHQKENHQNLVT 239

Query:   117 GEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPT 176
                +D S +SKEQ+ A  +++ EA++RRERA+AY+++HQQTW+NSSK  +   MD     
Sbjct:   240 AGNFDSSNKSKEQIVARSVNRKEASVRRERALAYAYSHQQTWRNSSKLPHQTLMDTNTTD 299

Query:   177 WGWSWLERWMAARPWESRSATE----KEPNNDQSSVKSAN-RSIVAGEISKSFARYQLNS 231
             WGWSWLERWMA+RPW++ S  +    K     ++S+KS+  RS      S+S  ++ +N+
Sbjct:   300 WGWSWLERWMASRPWDAESIDDQVSVKSSLKRENSIKSSPARSKTQKSASQSSIQWPVNN 359

Query:   232 DKLSPTTNQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDDSRSMVSVQSY 291
             D    T ++KI  T +                        R S+       +S VSV++ 
Sbjct:   360 D----TKSRKIEVTNRRHSIGGGSSENAKDDESVGSSSSRRNSLDNTQT-VKSKVSVETT 414

Query:   292 RRHSIAGS-----SVRDDESLP-TSPSAPRYMVPTESAKAKSR-LQSPLGVDKNGTPEKA 344
                S A +     +V    +L  T     +  V T    A +  ++S + V     P+K 
Sbjct:   415 SNVSNAQTVKPKANVGAKRNLDNTKTLKSKSSVGTTGNLANTEAVKSKVNVGTTSMPKKE 474

Query:   345 TLASAKKRLAYPPSPARPRRHSGPPKLESSINL 377
              +A  KK    PP    P++     +L SS +L
Sbjct:   475 VVADKKK----PPQMVLPKK-----RLSSSTSL 498

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
 Identities = 64/179 (35%), Positives = 96/179 (53%)

Query:    26 KEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXX 85
             +EE AAIRIQTAFRG+                  + G  V++QAA TLRCM         
Sbjct:    82 REEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQAR 141

Query:    86 XXXXXXXMSEENQALQRQLLQKHA--KELAMQMGEEWDDSIQSKEQVEANLLSKYEATMR 143
                    M+ E QA+Q+ LL +H    +L  ++ E W D   + + +++ L  + E   +
Sbjct:   142 VRARRVRMTVEGQAVQK-LLDEHRTKSDLLKEVEEGWCDRKGTVDDIKSKLQQRQEGAFK 200

Query:   144 RERAMAYSFTHQQTWKNSSKS-----SNPMFMDPRN---PTWGWSWLERWMAARPWESR 194
             RERA+AY+   +Q W++++ S     S+  ++  +     +WGWSWLERWMAARPWE+R
Sbjct:   201 RERALAYALAQKQ-WRSTTSSNLKTNSSISYLKSQEFDKNSWGWSWLERWMAARPWETR 258

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 80/225 (35%), Positives = 117/225 (52%)

Query:    24 KSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXX 83
             +S+E  AA RIQTA+RG+                  + G  V++QAA TLRCM       
Sbjct:    84 QSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQ 143

Query:    84 XXXXXXXXXMS-E-ENQALQRQLLQKHAKELAMQMGEE-WDDSIQSKEQVEANLLSKYEA 140
                      ++ E E++  Q+ L Q+ A E  ++  EE W DSI S EQ++A LL + EA
Sbjct:   144 ARVRARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVEQIQAKLLKRQEA 203

Query:   141 TMRRERAMAYSFTHQQTWKNSSK--SSNPMFMDPRNPTWGWSWLERWMAARPWESRSATE 198
               +RERAMAY+ THQ  W+  ++  S++  F   +N  WGW+WLERWMA RPWE+R    
Sbjct:   204 AAKRERAMAYALTHQ--WQAGTRLLSAHSGFQPDKN-NWGWNWLERWMAVRPWENRFLD- 259

Query:   199 KEPNNDQSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKIS 243
                +N +   K     +   E S++  + Q+ S    P T+  +S
Sbjct:   260 ---SNLRDDAKLGENGM---EQSENVPKTQIKSVSKMPNTSNLVS 298

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2043959 IQD14 "AT2G43680" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
 Identities = 64/224 (28%), Positives = 106/224 (47%)

Query:    27 EEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXX 86
             + A+A +IQ AFRGY                  + G  VKRQ  N ++ M          
Sbjct:   322 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQI 381

Query:    87 XXXXXXMSEENQALQRQLLQKHAKELAMQMGEE-WDDSIQSKEQVEANLLSKYEATMRRE 145
                   M E NQA   Q+ +  AK  A + G + WDDS+ +KE+ ++    K +A ++RE
Sbjct:   382 QSRRIKMLE-NQA---QVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRE 437

Query:   146 RAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PTWGWSWLERWMAARPWESRSATEKEPNND 204
             R+MAY+++ ++ WKNS KS+     D R+ P W W+W++R     P  S + +  +P  D
Sbjct:   438 RSMAYAYS-RKLWKNSPKSTQ----DNRSFPQW-WNWVDR---QNPLASPAPSYSQPQRD 488

Query:   205 QSSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPKH 248
                  S    +    +S+S  ++ +  D    T+  + S++  H
Sbjct:   489 FRLTPSR---LCPSPLSQSSKQHHIRLDNHFDTSTPRSSRSTFH 529

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 64/194 (32%), Positives = 99/194 (51%)

Query:    27 EEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXX 86
             E+ AA RIQTAF+ Y                   E   VK QA  TLR +          
Sbjct:    46 EDWAATRIQTAFKAYKARKSLRRLKGIARAKLSTEKQSVKNQAVVTLRYLHSWSKIQSEI 105

Query:    87 XXXXXXMSEENQALQRQLLQKHAKELAMQMGE---EWDDSIQSKEQVEANLLSKYEATMR 143
                   M  E +   ++L  +H ++L  ++ +   EW+   ++K+++   +L + EAT++
Sbjct:   106 KARRVCMVTEWRLKNKRL--EHQQKLEAKLHDVEVEWNGGSETKDEILERILQREEATIK 163

Query:   144 RERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESR-SATEKEPN 202
             RERA+AY+F+HQ  WK   K+      +  N  WGWSW ERW++ARPWE R S T K+P 
Sbjct:   164 RERALAYAFSHQ--WKADGKTQWLGSYELGNTNWGWSWKERWISARPWEVRYSVTPKKPK 221

Query:   203 NDQSSVKS-ANRSI 215
             + ++   S A R++
Sbjct:   222 SSKTDSNSPAKRTV 235

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 9.8e-21, Sum P(2) = 9.8e-21
 Identities = 64/222 (28%), Positives = 104/222 (46%)

Query:    27 EEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXX 86
             + A AI+IQ AFRGY                  + G  VKRQ  N ++ M          
Sbjct:   168 KNAYAIKIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQV 227

Query:    87 XXXXXXMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEATMRRER 146
                   M E N+A   +      K ++ +M ++WDDS+ +KE+ +  L  K +A ++RER
Sbjct:   228 QSRRIQMLE-NRARNDK---DDTKLVSSRMSDDWDDSVLTKEEKDVRLHRKIDAMIKRER 283

Query:   147 AMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAA-RPWESRSATEKEPNNDQ 205
             +MAY+++HQ  WKNS KS+  +      P W W+W++R     +P+     T   P+   
Sbjct:   284 SMAYAYSHQ-LWKNSPKSAQDI-RTSGFPLW-WNWVDRQKNQNQPFR---LTPTRPSLSP 337

Query:   206 SSVKSANRSIVAGEISKSFARYQLNSDKLSPTTNQKISKTPK 247
                +S+N++     ++ SF     NS K +  T  +   TP+
Sbjct:   338 QP-QSSNQNHF--RLNNSFDTSTPNSSKSTFVTPSRPIHTPQ 376

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 2.3e-20, P = 2.3e-20
 Identities = 93/386 (24%), Positives = 157/386 (40%)

Query:     1 MAAVSADQSVTEVRIVTN-TRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXX 59
             ++A S     +  + + N TR    ++E+ AA+ IQT FRGY                  
Sbjct:   104 VSAASETHPPSTTKELPNLTRRTYTAREDYAAVVIQTGFRGYLARRALRALKGLVKLQAL 163

Query:    60 MEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQ----------ALQRQLLQKHA 109
             + G  V++QA  TLRCM                +S +             L+ + LQ+ +
Sbjct:   164 VRGHNVRKQAKMTLRCMQALVRVQSRVLDQRKRLSHDGSRKSAFSDTQSVLESRYLQEIS 223

Query:   110 KELAMQ-----MGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQ-QTWKNSSK 163
                +M      + E+WDD   + E+V+A L  + +  +RRE   + S     Q  +    
Sbjct:   224 DRRSMSREGSSIAEDWDDRPHTIEEVKAMLQQRRDNALRRESNNSISQAFSHQVRRTRGS 283

Query:   164 SSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKE--PNNDQSSVKSANRSIVAGEIS 221
              S     +   P     WL+RWMA++PW+ R++T++   P      + ++   +  G  S
Sbjct:   284 YSTGDEYEEERP----KWLDRWMASKPWDKRASTDQRVPPVYKTVEIDTSQPYLTRGN-S 338

Query:   222 KSFARYQLNSDKLSPTTNQKISKTPKHQXXXXXXXXXXXXXXXXXXXXXPRGSVSGLDDD 281
             ++ A    +    SP+      +                           R   S  +  
Sbjct:   339 RTGASPSRSQRPSSPSRTSHHYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYT 398

Query:   282 SRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP 341
             S +     +Y   + +G SV    +  T+ + P YM  TESAKA+ R QS     +  TP
Sbjct:   399 SNTPSLRSNYSFTARSGYSVCTTTTTATNAALPNYMAITESAKARIRSQSAPR-QRPSTP 457

Query:   342 EKATLASAKKRLAYPPSPARPRRHSG 367
             EK  ++SA+KRL++P  P  P++  G
Sbjct:   458 EKERISSARKRLSFPVPPL-PQQMDG 482

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 58/192 (30%), Positives = 93/192 (48%)

Query:     8 QSVTEVRIVTNTRFAG-KSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVK 66
             ++   V+ V ++  A  K   E A IRIQ AFR +                  ++G  V 
Sbjct:    29 ETSNRVKPVESSSAASTKLTVEVAVIRIQKAFRAFKARKRLCSLKSARRFNSLIQGHTVM 88

Query:    67 RQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQKHAK-ELAM-QMGEEWDDSI 124
              Q +  L  +                M  + + LQ + L+   K E+ + ++  EW    
Sbjct:    89 NQTSTALNVIHSWYDIQNQIRARRLYMVTQGR-LQHKRLENRLKLEIKLHELEVEWCGGS 147

Query:   125 QSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWK-NSSKSSNPMFMDPRNPTWGWSWLE 183
             ++ E++ A +  K EAT++RERAMAY+F+HQ  W+ N+++       +    +WGWSW E
Sbjct:   148 ETMEEILAKIQQKEEATVKRERAMAYAFSHQ--WRANATQYLGQASFNLGKESWGWSWKE 205

Query:   184 RWMAARPWESRS 195
             RW+AARPWE R+
Sbjct:   206 RWIAARPWEIRA 217

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	386
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	2e-07
smart00015	23	smart00015, IQ, Calmodulin-binding motif	3e-04
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	0.001

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 282 SRSMVSVQSYRRHSIAGSSVRDDESLPTSPSAPRYMVPTESAKAKSRLQSPLGVDKNGTP 341
             S  S  S    S    S RDD S  +SPS P YM  TESAKAK R QS     +  T 
Sbjct: 6   LSSSSSKSSRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAP-RQRPETE 64

Query: 342 EKATLASAKKRLAYPPSPARPRRHSG 367
           E+ + +SA KRL+ P S +     S 
Sbjct: 65  ERESGSSATKRLSLPVSSSSGGSSSS 90

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

>gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif

 Score = 37.3 bits (88), Expect = 3e-04
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 26 KEEAAAIRIQTAFRGYLARRALR 48
          +   AAI IQ A+RGYLAR+  +
Sbjct: 1  RLTRAAIIIQAAWRGYLARKRYK 23

Short calmodulin-binding motif containing conserved Ile and Gln residues. Length = 23

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 35.8 bits (84), Expect = 0.001
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query: 28 EAAAIRIQTAFRGYLARRALR 48
            AAI+IQ A+RGYLAR+  +
Sbjct: 1  RKAAIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	386
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.45
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.99
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.5
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.33
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.6
PTZ00014	821	myosin-A; Provisional	95.77
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	95.36
COG5022	1463	Myosin heavy chain [Cytoskeleton]	92.41
KOG0520	975	consensus Uncharacterized conserved protein, conta	91.53
KOG2128	1401	consensus Ras GTPase-activating protein family - I	90.47
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	90.21
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	90.06
smart00015	26	IQ Short calmodulin-binding motif containing conse	82.75
PTZ00014	821	myosin-A; Provisional	81.68
KOG0942	1001	consensus E3 ubiquitin protein ligase [Posttransla	81.11
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	80.74

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.45  E-value=1e-13  Score=117.10  Aligned_cols=57  Identities=47%  Similarity=0.611  Sum_probs=47.1

Q ss_pred             CCCCCccCccccccccccCCCCCCCCCCCCccccccccCcccCCCCCCCCCccCCCCC
Q 016618          313 APRYMVPTESAKAKSRLQSPLGVDKNGTPEKATLASAKKRLAYPPSPARPRRHSGPPK  370 (386)
Q Consensus       313 ~p~ym~~T~sakak~R~~s~p~~~~~~~~e~~~~~~~kkRlS~p~s~~~~r~~s~~p~  370 (386)
                      +||||++|||||||+|+||+|++ +++++|......++||||||.+.+.....+..|+
T Consensus        34 ~PsYMa~TeSakAK~RsqSaPrq-R~~~~~~~~~~~~~kR~S~~~~~~~~~~~~~~~~   90 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQSAPRQ-RPGTPERAEKQSSKKRLSLPGSSNSGSSSSRSPR   90 (102)
T ss_pred             CCCccchhhhhhhhhhccCCccc-CCCccccccccccccccccCCCCCCCcCCCCCCc
Confidence            89999999999999999999997 7777766544578999999987775666665554

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.99  E-value=7.3e-06  Score=50.55  Aligned_cols=21  Identities=52%  Similarity=0.809  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHH
Q 016618           28 EAAAIRIQTAFRGYLARRALR   48 (386)
Q Consensus        28 e~AAi~IQsafRGylARr~l~   48 (386)
                      ..|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.50  E-value=9.1e-05  Score=47.79  Aligned_cols=22  Identities=55%  Similarity=0.776  Sum_probs=20.1

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHH
Q 016618           27 EEAAAIRIQTAFRGYLARRALR   48 (386)
Q Consensus        27 ee~AAi~IQsafRGylARr~l~   48 (386)
                      .+.||++||+.||||++|+.|.
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5789999999999999999984

Calmodulin-binding motif.

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.33  E-value=0.00036  Score=77.71  Aligned_cols=63  Identities=27%  Similarity=0.354  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhh
Q 016618           27 EEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRM   93 (386)
Q Consensus        27 ee~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~   93 (386)
                      ...+++.||..||||+.|+.|..+ ++++.+|+++||.++|+.  . + ...+++.+|+.+|+...|+
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~--~-~-~~~aai~~q~~~r~~~~r~  735 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRE--T-E-REAAAIGIQKECRSYLNRR  735 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh--h-H-HHHHHHHhHHHHHHHHHHH
Confidence            345778899999999999999999 789999999999999981  1 2 4455555565555555554

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.60  E-value=0.0015  Score=73.44  Aligned_cols=73  Identities=26%  Similarity=0.363  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHH-------HHHhHHHHHHHHHHHHHhhhhhhh
Q 016618           26 KEEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTL-------RCMQTLSRLQSQIRSRRVRMSEEN   97 (386)
Q Consensus        26 ~ee~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa~~tl-------r~~qAav~vQs~vR~r~~R~see~   97 (386)
                      ....||..||.-||||+.|+.|..+ .-+|++|+.|||+.+|+++....       +-+.++-++|+.+|+++.|...|.
T Consensus       808 ~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~  887 (975)
T KOG0520|consen  808 SDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEE  887 (975)
T ss_pred             cchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhc
Confidence            3456999999999999999999999 67999999999999999997332       345667778999999998876554


Q ss_pred             H
Q 016618           98 Q   98 (386)
Q Consensus        98 ~   98 (386)
                      +
T Consensus       888 ~  888 (975)
T KOG0520|consen  888 Q  888 (975)
T ss_pred             c
Confidence            3

>PTZ00014 myosin-A; Provisional

Probab=95.77  E-value=0.0087  Score=67.03  Aligned_cols=41  Identities=15%  Similarity=0.203  Sum_probs=36.6

Q ss_pred             HHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhh
Q 016618           29 AAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        29 ~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa   69 (386)
                      ..++.||++||||++|+.|... .++++||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3688999999999999999987 7899999999999988754

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=95.36  E-value=0.033  Score=62.61  Aligned_cols=66  Identities=23%  Similarity=0.207  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhhhhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           26 KEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        26 ~ee~AAi~IQsafRGylARr~l~alkglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      ....+++.||+.+||+++|+........+.+|..+|++..|+++   .....+++.+|+.+|+..+|..
T Consensus       694 ~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~r~e  759 (862)
T KOG0160|consen  694 QLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLARNE  759 (862)
T ss_pred             HHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccc
Confidence            45678999999999999998333236778889999999999999   4557788999999999999983

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=92.41  E-value=0.28  Score=57.68  Aligned_cols=65  Identities=23%  Similarity=0.332  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhh
Q 016618           27 EEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVR   92 (386)
Q Consensus        27 ee~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R   92 (386)
                      -...+++||++|||++.|+.|.+. +.+..+|.+.+|..+++.....++ .....++|..++...-|
T Consensus       744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~r  809 (1463)
T COG5022         744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELK-WRLFIKLQPLLSLLGSR  809 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchH-HHhHHHhhHHhHHHhhH
Confidence            346899999999999999988876 788888999999888876543332 34455566666554444

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=91.53  E-value=0.53  Score=53.65  Aligned_cols=63  Identities=27%  Similarity=0.386  Sum_probs=46.2

Q ss_pred             HHHHHHHHhhhHHHHHHHHhh---hhHH--------HHHhhhcccchhhhh----------------------HHHHHHH
Q 016618           30 AAIRIQTAFRGYLARRALRAL---RGLV--------RLKLLMEGPVVKRQA----------------------ANTLRCM   76 (386)
Q Consensus        30 AAi~IQsafRGylARr~l~al---kglV--------rLQalvRG~~vRrqa----------------------~~tlr~~   76 (386)
                      =+|+||+++|||..|+.|+.|   -|+.        ++|.-+||+..|+.+                      ..+.+--
T Consensus       835 p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~  914 (975)
T KOG0520|consen  835 PIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLT  914 (975)
T ss_pred             ccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            488999999999999999877   2221        237778888776522                      2234556


Q ss_pred             hHHHHHHHHHHHHHhh
Q 016618           77 QTLSRLQSQIRSRRVR   92 (386)
Q Consensus        77 qAav~vQs~vR~r~~R   92 (386)
                      +|+++||+.+|....+
T Consensus       915 ~A~~~VQsm~rs~~a~  930 (975)
T KOG0520|consen  915 RAVVRVQSMFRSPKAQ  930 (975)
T ss_pred             HHHHHHHHHhcCHHHH
Confidence            8999999999988777

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=90.47  E-value=0.46  Score=55.68  Aligned_cols=67  Identities=22%  Similarity=0.338  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHhhhHHH----HHHHHhh-hhHHHHHhhhcccchhhhhHH----HHHHHhHHHHHHHHHHHHHhhh
Q 016618           27 EEAAAIRIQTAFRGYLA----RRALRAL-RGLVRLKLLMEGPVVKRQAAN----TLRCMQTLSRLQSQIRSRRVRM   93 (386)
Q Consensus        27 ee~AAi~IQsafRGylA----Rr~l~al-kglVrLQalvRG~~vRrqa~~----tlr~~qAav~vQs~vR~r~~R~   93 (386)
                      ..-..+.||..+|||+.    ...+... +.+|.+|++.||+++|+.+..    -..||...+.+|+.+|.+..|.
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~  639 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRK  639 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccch
Confidence            44578899999999993    1222222 789999999999999998763    3569999999999999998885

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=90.21  E-value=0.13  Score=31.53  Aligned_cols=19  Identities=5%  Similarity=0.254  Sum_probs=13.3

Q ss_pred             hhHHHHHhhhcccchhhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa   69 (386)
                      +.+|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            3567777777777777765

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=90.06  E-value=0.49  Score=52.53  Aligned_cols=55  Identities=20%  Similarity=0.334  Sum_probs=38.4

Q ss_pred             HHHHHHHHHhhhHHHHHHHHhhhh-HHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           29 AAAIRIQTAFRGYLARRALRALRG-LVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        29 ~AAi~IQsafRGylARr~l~alkg-lVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      .-|+.||.+|||+++|..|+.++. ++.++ ..|.+-+          -..+-.||.++|+.+.++-
T Consensus       697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~----------ks~v~el~~~~rg~k~~r~  752 (1001)
T KOG0164|consen  697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKL----------KSYVQELQRRFRGAKQMRD  752 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----------HHHHHHHHHHHHhhhhccc
Confidence            478999999999999999999954 44444 4442222          2234567888888776653

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=82.75  E-value=0.6  Score=29.88  Aligned_cols=19  Identities=11%  Similarity=0.284  Sum_probs=15.3

Q ss_pred             hhHHHHHhhhcccchhhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa   69 (386)
                      +.++.||+.+||+++|+++
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            5677888888888888876

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=81.68  E-value=2.1  Score=48.49  Aligned_cols=40  Identities=23%  Similarity=0.255  Sum_probs=34.1

Q ss_pred             hHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           52 GLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        52 glVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      -++.||+.+||++.|+.+   ++..++++.||+.+|++..++.
T Consensus       779 ~~~~iq~~~r~~~~r~~~---~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKV---RKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence            466789999999999999   4558899999999999987753

>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=81.11  E-value=1  Score=51.09  Aligned_cols=26  Identities=31%  Similarity=0.611  Sum_probs=23.0

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHhh
Q 016618           25 SKEEAAAIRIQTAFRGYLARRALRAL   50 (386)
Q Consensus        25 ~~ee~AAi~IQsafRGylARr~l~al   50 (386)
                      .++|.+||+||+.+|||++|++.+.+
T Consensus        26 rk~e~~av~vQs~~Rg~~~r~~~~~~   51 (1001)
T KOG0942|consen   26 RKQEKNAVKVQSFWRGFRVRHNQKLL   51 (1001)
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHH
Confidence            45778999999999999999998766

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=80.74  E-value=1.5  Score=49.10  Aligned_cols=39  Identities=31%  Similarity=0.432  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhhhhHH-HHHhhhcccchh
Q 016618           26 KEEAAAIRIQTAFRGYLARRALRALRGLV-RLKLLMEGPVVK   66 (386)
Q Consensus        26 ~ee~AAi~IQsafRGylARr~l~alkglV-rLQalvRG~~vR   66 (386)
                      ++|.||+.||..+|||++|+.+.  +.|. .+-.++-.+.+-
T Consensus        28 rr~~aa~~iq~~lrsyl~Rkk~~--~~I~~e~d~~f~~d~~d   67 (1096)
T KOG4427|consen   28 RREAAALFIQRVLRSYLVRKKAQ--IEIQEEFDNLFSCDSVD   67 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhhhcCCcc
Confidence            57789999999999999999876  2222 234455444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	386
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	9e-04
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	3e-06
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	3e-05
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	2e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 18/144 (12%)

Query: 20  RFAGKSKEEAAAIRIQTAFRGYLARRALRALR-GLVRLKLLMEGPVVKRQAANTLRCMQT 78
            +A   +   AAI IQ   R Y+ R+  + +R   + L+ L+ G  + R     +     
Sbjct: 808 CYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRG-YLVRNKYQMMLREHK 866

Query: 79  LSRLQSQIRSRRVRMSEENQ---------ALQRQLLQKHAKELAMQMGEEWDDSIQSKEQ 129
              +Q  +R    R+                +R + ++  K+L ++     +   +    
Sbjct: 867 SIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEA-RSVERYKKLHIG 925

Query: 130 VEANL------LSKYEATMRRERA 147
           +E  +      + +     +    
Sbjct: 926 LENKIMQLQRKIDEQNKEYKSLLE 949

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 29/127 (22%), Positives = 44/127 (34%), Gaps = 6/127 (4%)

Query: 24  KSKEEAAAIRIQTAFRGYLARRALRALR-GLVRLKLLMEGPVVKRQAANTLRCMQTLSRL 82
             K  AA IRIQ   RG+L R+    +R   + ++  + G    R  A  LR  +    +
Sbjct: 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQA-RCYATFLRRTRAAIII 822

Query: 83  QSQIRSRRVRMSEENQALQRQLLQKHAKELA----MQMGEEWDDSIQSKEQVEANLLSKY 138
           Q   R   VR   +        LQ   +        QM      SI  ++ V   L   +
Sbjct: 823 QKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVH 882

Query: 139 EATMRRE 145
                + 
Sbjct: 883 YHRTLKA 889

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 14/129 (10%), Positives = 39/129 (30%), Gaps = 7/129 (5%)

Query: 26  KEEAAAIRIQTAFRGYLARRALRALR---GLVRLKLLMEGPVVKRQAANTLRCMQTLSRL 82
               +   +Q+    +   +          +  L+ +      K +       +      
Sbjct: 785 DFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLT 844

Query: 83  QSQIRSRRVRMSEENQALQ--RQLLQKHAKELAMQMGEEWDDSIQSKEQVEANLLSKYEA 140
            ++I S    + +  Q      ++  K  K++A+ + +     I  K +  A   S Y  
Sbjct: 845 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNR--ILKKLENWATTKSVYLG 902

Query: 141 TMRRERAMA 149
           +     ++ 
Sbjct: 903 SNETGDSIT 911

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 21/134 (15%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 20  RFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQAANTLRCMQTL 79
            FA + ++  +   IQ   R ++       +     +  L++    + +       +Q  
Sbjct: 810 AFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXIXPLLKVTRQEEEMQAKDEELQRT 869

Query: 80  SRLQSQIRSRRVRMSEENQAL--QRQLLQKHAK---ELAMQMGEEWDDSIQSKEQVEANL 134
              Q +  +    + +++  L  ++ LLQ+  +   EL  +  E        K+++E  +
Sbjct: 870 KERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEE-I 928

Query: 135 LSKYEATMRRERAM 148
           L + EA +  E   
Sbjct: 929 LHEMEARIEEEEER 942

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 14/135 (10%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 24  KSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLMEGPVV---------KRQAANTLR 74
           + +  +   +     R     + +   +  +  +   +             + +      
Sbjct: 759 EQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 818

Query: 75  CMQTLSRLQSQIRSRRVRMSEENQALQRQLLQKHAKELAMQMGEEWDDSIQSKEQVEANL 134
             Q +S L++   S + ++    + ++R+     A     ++   W  +++  EQ  A  
Sbjct: 819 KGQEVSELEAIYNSLQTKL----RLIKREPFVAPAGLTPNEIDSTW-SALEKAEQEHAEA 873

Query: 135 LSKYEATMRRERAMA 149
           L + E   +++ A+ 
Sbjct: 874 L-RIELKRQKKIAVL 887

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	386
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	99.01
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.66
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.55
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.53
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	98.07
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.96
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.63
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.93
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.85
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	96.74
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.29
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.12
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.12
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.2
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	95.14
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	93.51
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	92.25
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	87.91

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=99.01  E-value=3.1e-10  Score=84.72  Aligned_cols=53  Identities=30%  Similarity=0.421  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHH
Q 016618           26 KEEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTL   79 (386)
Q Consensus        26 ~ee~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAa   79 (386)
                      +.+.|||.||+.||||++|+.|..+ ++++.||+.+||+++|+.+. .++...|+
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~-~~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCc
Confidence            5678999999999999999999999 68999999999999999994 45555554

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.66  E-value=1.6e-08  Score=72.55  Aligned_cols=41  Identities=15%  Similarity=0.297  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhhhHHHHHHHHhh-h--hHHHHHhhhcccchhhhh
Q 016618           29 AAAIRIQTAFRGYLARRALRAL-R--GLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        29 ~AAi~IQsafRGylARr~l~al-k--glVrLQalvRG~~vRrqa   69 (386)
                      .|||.||+.||||++|+.+..+ +  ..+.||+.+||+++|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            5899999999999999999887 3  788888888888888765

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.55  E-value=7e-08  Score=107.92  Aligned_cols=70  Identities=21%  Similarity=0.289  Sum_probs=56.2

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhhh
Q 016618           25 SKEEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSE   95 (386)
Q Consensus        25 ~~ee~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~se   95 (386)
                      .+++.||++||+.||||++|+.|..+ .+++.||+.+||+++|+++. .++...+++.||+.+|++..|+..
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~-~lr~~~aav~IQ~~~Rg~l~R~~y  883 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQ-MMLREHKSIIIQKHVRGWLARVHY  883 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTTHHHHHT
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678899999999999999998888 67888899999999988884 455566788888888887777643

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.53  E-value=1.1e-07  Score=106.37  Aligned_cols=67  Identities=28%  Similarity=0.353  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhhh
Q 016618           28 EAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSE   95 (386)
Q Consensus        28 e~AAi~IQsafRGylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~se   95 (386)
                      ..||+.||++||||++|+.|+.+ .+++.||+.+||+++|+.+ ..++...|++.||+.+|++.+|+.-
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~y  835 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKRY  835 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHHH
Confidence            56999999999999999999999 7899999999999999998 5578899999999999999999753

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=98.07  E-value=1.8e-06  Score=57.78  Aligned_cols=24  Identities=46%  Similarity=0.639  Sum_probs=21.6

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHH
Q 016618           25 SKEEAAAIRIQTAFRGYLARRALR   48 (386)
Q Consensus        25 ~~ee~AAi~IQsafRGylARr~l~   48 (386)
                      .+||.||++||.|||+||.|+.+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Confidence            579999999999999999998754

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.96  E-value=3.3e-06  Score=54.85  Aligned_cols=22  Identities=45%  Similarity=0.705  Sum_probs=20.0

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHH
Q 016618           25 SKEEAAAIRIQTAFRGYLARRA   46 (386)
Q Consensus        25 ~~ee~AAi~IQsafRGylARr~   46 (386)
                      .+||.||++||.|||+||.|+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            5799999999999999999875

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.63  E-value=5e-05  Score=54.08  Aligned_cols=42  Identities=17%  Similarity=0.281  Sum_probs=37.5

Q ss_pred             hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRM   93 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~   93 (386)
                      +.++.||+.+||+++|+++ ..++...+++.||+.+|++.+|+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk   45 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRA   45 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHH
Confidence            5789999999999999999 55667789999999999998886

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.93  E-value=0.00092  Score=50.50  Aligned_cols=40  Identities=30%  Similarity=0.389  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhh----hhHHHHHhhhcccchhh
Q 016618           28 EAAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKR   67 (386)
Q Consensus        28 e~AAi~IQsafRGylARr~l~al----kglVrLQalvRG~~vRr   67 (386)
                      ...++.||+..|||++|+.|..+    .++..||.-+|+++.++
T Consensus         6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            45678888888888888887765    23444455555555444

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.85  E-value=0.00074  Score=50.95  Aligned_cols=39  Identities=15%  Similarity=0.177  Sum_probs=22.3

Q ss_pred             HHHHHHHHHhhhHHHHHHHHhh----hhHHHHHhhhcccchhh
Q 016618           29 AAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKR   67 (386)
Q Consensus        29 ~AAi~IQsafRGylARr~l~al----kglVrLQalvRG~~vRr   67 (386)
                      ..++.||+..|||++|+.|..+    .++..||.-+|+++.++
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4567777777777777777654    23333444444444433

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=96.74  E-value=0.0013  Score=48.61  Aligned_cols=42  Identities=14%  Similarity=0.249  Sum_probs=36.5

Q ss_pred             hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMSE   95 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~se   95 (386)
                      ..+|.||+.+||+++|+.+   ++...+++.||+.+||+.+|+.-
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~~~   47 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARCYA   47 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999   34457999999999999998753

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.29  E-value=0.0026  Score=69.72  Aligned_cols=41  Identities=29%  Similarity=0.354  Sum_probs=33.7

Q ss_pred             HHHHHHHHHhhhHHHHHHHHhh----hhHHHHHhhhcccchhhhh
Q 016618           29 AAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        29 ~AAi~IQsafRGylARr~l~al----kglVrLQalvRG~~vRrqa   69 (386)
                      .+|+.||+++|||++|+.|+.+    ..++.||..+||+++||..
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            4789999999999999999887    3577777777777777765

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.12  E-value=0.0048  Score=46.45  Aligned_cols=44  Identities=11%  Similarity=0.001  Sum_probs=39.1

Q ss_pred             hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      .-++.||+.+||+++|+.+...+....|+..||..+|++..++.
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~   48 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKN   48 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            45788999999999999999888888999999999999887763

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.12  E-value=0.0055  Score=46.18  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=39.1

Q ss_pred             hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      +-++.||+.+||+++|+.+...+....|+..||..+|++..++.
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~   50 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            45889999999999999999888888999999999999877653

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.20  E-value=0.019  Score=50.88  Aligned_cols=34  Identities=29%  Similarity=0.499  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHhh-hhHHHHHhhh
Q 016618           27 EEAAAIRIQTAFRGYLARRALRAL-RGLVRLKLLM   60 (386)
Q Consensus        27 ee~AAi~IQsafRGylARr~l~al-kglVrLQalv   60 (386)
                      +..|+|+||+..||||+|+.++-= .|++++.+|.
T Consensus        44 R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           44 RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            678999999999999999988744 8888887764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=95.14  E-value=0.038  Score=62.33  Aligned_cols=41  Identities=22%  Similarity=0.296  Sum_probs=37.2

Q ss_pred             HHHHHHHHHhhhHHHHHHHHhh----hhHHHHHhhhcccchhhhh
Q 016618           29 AAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        29 ~AAi~IQsafRGylARr~l~al----kglVrLQalvRG~~vRrqa   69 (386)
                      .+|+.||+.||||++|+.|..+    .+++.||..+||++.+|.+
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            5899999999999999999987    4799999999999998864

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=93.51  E-value=0.05  Score=49.07  Aligned_cols=26  Identities=42%  Similarity=0.617  Sum_probs=22.8

Q ss_pred             chHHHHHHHHHHHHhhhHHHHHHHHh
Q 016618           24 KSKEEAAAIRIQTAFRGYLARRALRA   49 (386)
Q Consensus        24 ~~~ee~AAi~IQsafRGylARr~l~a   49 (386)
                      ...|+.||++||.|||.|+.|+.+..
T Consensus       126 ~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          126 RKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccc
Confidence            35688999999999999999988765

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=92.25  E-value=0.16  Score=55.82  Aligned_cols=47  Identities=17%  Similarity=0.162  Sum_probs=39.9

Q ss_pred             Hhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           48 RAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        48 ~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      ..+ +-++.||+.+||++.|+.+...+....|++.||..+|++..|+.
T Consensus       776 ~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~  823 (837)
T 1kk8_A          776 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  823 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            344 56788999999999999997766677899999999999988763

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=87.91  E-value=0.55  Score=52.97  Aligned_cols=53  Identities=11%  Similarity=0.113  Sum_probs=42.2

Q ss_pred             HHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           42 LARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        42 lARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      |....-..+ +-++.||+.+||++.|+.+...+....+++.||..+|++..++.
T Consensus       783 LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          783 LEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            443333445 56789999999999999998777778999999999999987753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	386
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	7e-04

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 39.3 bits (91), Expect = 7e-04
 Identities = 5/42 (11%), Positives = 17/42 (40%)

Query: 20  RFAGKSKEEAAAIRIQTAFRGYLARRALRALRGLVRLKLLME 61
            +    +   +   IQ   R ++  +    ++   ++K L++
Sbjct: 753 EYRAMVERRESIFCIQYNVRSFMNVKHWPWMKLFFKIKPLLK 794

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	386
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.9
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.87
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	93.88
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	91.59

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.90  E-value=0.00035  Score=73.38  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhh----hhHHHHHhhhcccchhhhh
Q 016618           28 EAAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        28 e~AAi~IQsafRGylARr~l~al----kglVrLQalvRG~~vRrqa   69 (386)
                      ..+|+.||+.||||++|+.|+.+    +.++.||+.+||+++||.+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            46899999999999999999876    3688889999999888876

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.87  E-value=0.00027  Score=74.15  Aligned_cols=42  Identities=29%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhhh----hHHHHHhhhcccchhhhh
Q 016618           28 EAAAIRIQTAFRGYLARRALRALR----GLVRLKLLMEGPVVKRQA   69 (386)
Q Consensus        28 e~AAi~IQsafRGylARr~l~alk----glVrLQalvRG~~vRrqa   69 (386)
                      ..+|+.||+.||||++|+.|+.++    .++.||..+||+++||.+
T Consensus       731 ~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            468999999999999999999884    577788888888888776

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=93.88  E-value=0.029  Score=58.39  Aligned_cols=54  Identities=11%  Similarity=0.025  Sum_probs=43.3

Q ss_pred             HHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           41 YLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        41 ylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      +|....-..+ +.++.||+.+||+++|+.+...+....|++.||+.+|++..|+.
T Consensus       725 ~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~  779 (794)
T d2mysa2         725 LLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH  779 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3444433444 66889999999999999998777778899999999999988763

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=91.59  E-value=0.093  Score=54.45  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=37.2

Q ss_pred             hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618           51 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS   94 (386)
Q Consensus        51 kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s   94 (386)
                      +.++.||+.+||++.|+++........+++.||+.+|++.+|+.
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~  775 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN  775 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            56788899999999999996555556688999999999988864