Citrus Sinensis ID: 016646

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-----
Protein Sequence
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Secondary Structure (PSIPRED)
cccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHcHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccEEcccccccccccccccEEEcccccccccccEccccccEEEEEccccccccccHEEEHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
masfveidrcshlislpltslnacpcrpssnkiliftqkqppklnvrivfnrpkftlRVRQTGIDTNRRMISAVAraepdhlddgnlkegidngHKLVVSEksvsdsgsqQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSrgiaagmtpppryvSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGlfycgylpcfwvklrcglsapalntgigvswpillgglphwtafgrtqltsispkktwegtivgLGGCIATTVVLSKifcwprylpsaiVFGFLNFfgsvfgdltesmikrdagvkdsgslipghggildrvdsYIFTGALAYSFVKtflplygv
Flexible Loop (DISEMBL)
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILiftqkqppklnvrivfnrpkftlrvrqtgidtnrrmISAVAraepdhlddgnlkeGIDNGHKLVVSEksvsdsgsqqKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRgiaagmtppprYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Low Complexity Region (SEG)
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRigfglgigifvggvvlaggWvftvcfaaavfvgaREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDvsvtfaafvvamalllQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Disordered region (IsUnstruct)
***FVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMIS*********************************************KRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY**
Disordered Region (DISOPRED)
**SFV**DRCSHLISLPLTSLNA************************************************************************************************IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Disordered Region (DISEMBL)
********RCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVS***************LRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Disordered Region (DISPRO)
**SFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAE****************************SGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	385	2.2.26 [Sep-21-2011]
P73548	293	Phosphatidate cytidylyltr	N/A	no	0.610	0.802	0.382	6e-38
Q9ZML7	266	Phosphatidate cytidylyltr	yes	no	0.272	0.394	0.432	3e-15
P44937	288	Phosphatidate cytidylyltr	yes	no	0.228	0.305	0.485	3e-14
P0ABG3	285	Phosphatidate cytidylyltr	yes	no	0.225	0.305	0.5	4e-14
P0ABG1	285	Phosphatidate cytidylyltr	N/A	no	0.225	0.305	0.5	4e-14
P0ABG2	285	Phosphatidate cytidylyltr	N/A	no	0.225	0.305	0.5	4e-14
O25004	266	Phosphatidate cytidylyltr	yes	no	0.272	0.394	0.423	7e-14
Q59640	271	Phosphatidate cytidylyltr	yes	no	0.238	0.339	0.446	2e-13
P63758	306	Phosphatidate cytidylyltr	yes	no	0.675	0.849	0.273	3e-13
P63759	306	Phosphatidate cytidylyltr	yes	no	0.675	0.849	0.273	3e-13

>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=cdsA PE=3 SV=1

 Score =  158 bits (400), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 143/272 (52%), Gaps = 37/272 (13%)

Query: 133 VVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTL 192
           +++ GGW F+   A  +++G REYF++VR++GIA         +S +  +     P LT 
Sbjct: 19  LLILGGWYFSAAIALVIYLGLREYFQMVRAKGIAPA-AKTTMVLSLMLLLSATVTPHLT- 76

Query: 193 YFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCG----- 247
                D        ++   LL Q      A +S+++ GLFY GYLP +WV+LR G     
Sbjct: 77  -----DAFFPLTGALICFYLLFQPKMATIADISTSLLGLFYGGYLPSYWVRLRLGDGAVN 131

Query: 248 ---LSAPALN--------------TGIGVS-------WPILLGGLPHWTAFGRTQLTSIS 283
              L  P LN              TG+ V+       W   +G        GRT+L+ IS
Sbjct: 132 PMGLHLP-LNGFWPESWAHPENFPTGLLVTILAFACIWAADIGAYIMGKWLGRTRLSDIS 190

Query: 284 PKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDA 343
           PKKT EG++ G+GG +   V+ +    WP +  +  + G L    S+ GDLTESM+KRDA
Sbjct: 191 PKKTVEGSLWGVGGSLLVGVLGAWYLQWPYWEITGALLGLLIGIVSLLGDLTESMMKRDA 250

Query: 344 GVKDSGSLIPGHGGILDRVDSYIFTGALAYSF 375
           GVKDSG LIPGHGGILDR DSY+FT  L Y F
Sbjct: 251 GVKDSGQLIPGHGGILDRTDSYVFTAPLVYYF 282

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 4EC: 1

>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain J99) GN=cdsA PE=3 SV=1

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 6/111 (5%)

Query: 275 GRTQLTSISPKKTWEGTIVG--LGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG 332
           G+T  T+ SP KT EG ++G  L   + + V + K+         A++F FL    +VFG
Sbjct: 151 GKTPFTATSPNKTLEGALIGVVLASVLGSFVGMGKL---SGGFLMALLFSFLIALMAVFG 207

Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY 383
           DL ES +KR  GVKDSG ++PGHGG+LDR+DS +F GAL+   +  FL ++
Sbjct: 208 DLYESYLKRKVGVKDSGKILPGHGGVLDRLDSMLF-GALSLHVLLYFLEIW 257

Helicobacter pylori (strain J99) (taxid: 85963)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=cdsA PE=3 SV=1

 Score = 80.1 bits (196), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 61/101 (60%), Gaps = 13/101 (12%)

Query: 273 AFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCW--------PRYLPSAIVFGF 323
           AFG+ +L   +SP K+WEG I   GG I T +VL+ IF           R +   I+   
Sbjct: 176 AFGKRKLAPKVSPGKSWEGVI---GGLI-TALVLAFIFIHFSNNTLVGDRNITGFIILSV 231

Query: 324 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
                SV GDLTESM KR++GVKDS  LIPGHGG+LDR+DS
Sbjct: 232 ATVAISVLGDLTESMFKRESGVKDSSQLIPGHGGVLDRIDS 272

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA PE=3 SV=2

 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)

Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA----IVFGFLNFFG 328
           FG+ +L   +SP KTW+G I GL    AT  V+S  +     L  A    ++   +    
Sbjct: 175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230

Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
           SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Shigella flexneri (taxid: 623)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12) GN=cdsA PE=1 SV=2

 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)

Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA----IVFGFLNFFG 328
           FG+ +L   +SP KTW+G I GL    AT  V+S  +     L  A    ++   +    
Sbjct: 175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230

Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
           SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7 GN=cdsA PE=3 SV=2

 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)

Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA----IVFGFLNFFG 328
           FG+ +L   +SP KTW+G I GL    AT  V+S  +     L  A    ++   +    
Sbjct: 175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230

Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
           SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=cdsA PE=3 SV=1

 Score = 78.6 bits (192), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 6/111 (5%)

Query: 275 GRTQLTSISPKKTWEGTIVG--LGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG 332
           G+T  T  SP KT EG ++G  L   + + V + K+         A+ F FL    +VFG
Sbjct: 151 GKTPFTPTSPNKTLEGALIGVVLASVLGSFVGMGKL---SGGFFMALFFSFLIALVAVFG 207

Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY 383
           DL ES +KR  G+KDSG ++PGHGG+LDR+DS +F GAL    +  FL ++
Sbjct: 208 DLYESYLKRKVGIKDSGKILPGHGGVLDRLDSMLF-GALGLHALLYFLEIW 257

Helicobacter pylori (strain ATCC 700392 / 26695) (taxid: 85962)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|Q59640|CDSA_PSEAE Phosphatidate cytidylyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cdsA PE=3 SV=2

 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)

Query: 273 AFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNF-FGSV 330
           AFG+ +L   +SP K+WEG   GL   +A T+ +     W        + G     F S+
Sbjct: 158 AFGKRKLAPRVSPGKSWEGVYGGLAASLAITLAVGLYRGWSLGALLLALLGAALVVFVSI 217

Query: 331 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
            GDLTESM KR +G+KDS +L+PGHGG+LDR+DS
Sbjct: 218 VGDLTESMFKRQSGIKDSSNLLPGHGGVLDRIDS 251

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P63758|CDSA_MYCTU Phosphatidate cytidylyltransferase OS=Mycobacterium tuberculosis GN=cdsA PE=3 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 121/307 (39%), Gaps = 47/307 (15%)

Query: 102 KSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVR 161
           K    + + +    LR  I  GL IG+ +  V++    V+    A A  V   E    +R
Sbjct: 20  KQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLR 79

Query: 162 SRGIAAGMTPPPRYVSRVCSVICAFMPI--LTLYFGQIDVSVTFAAFVVAMA---LLLQR 216
             G          Y+  V  ++        LT  FG +     F   VV      L +Q 
Sbjct: 80  EAG----------YLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQD 129

Query: 217 GNPR------------FAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPIL 264
              R             + +S+T+F           WV L C   A  +    G  W   
Sbjct: 130 SVTRPTTGGAPSPGNYLSDVSATVF--------LAVWVPLFCSFGAMLVYPENGSGWVFC 181

Query: 265 L---------GGLPHWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY 314
           +         GG      FG+  +  +ISPKK+WEG   G   C  T  +++  F   + 
Sbjct: 182 MMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG-FAGSLVCGITATIITATFLVGKT 240

Query: 315 LPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYS 374
                + G L    +  GDL ES +KRD G+KD G L+PGHGG++DR+D  I   A+A  
Sbjct: 241 PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDG-ILPSAVAAW 299

Query: 375 FVKTFLP 381
            V T LP
Sbjct: 300 IVLTLLP 306

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

>sp|P63759|CDSA_MYCBO Phosphatidate cytidylyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cdsA PE=3 SV=1

 Score = 76.3 bits (186), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 121/307 (39%), Gaps = 47/307 (15%)

Query: 102 KSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVR 161
           K    + + +    LR  I  GL IG+ +  V++    V+    A A  V   E    +R
Sbjct: 20  KQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLR 79

Query: 162 SRGIAAGMTPPPRYVSRVCSVICAFMPI--LTLYFGQIDVSVTFAAFVVAMA---LLLQR 216
             G          Y+  V  ++        LT  FG +     F   VV      L +Q 
Sbjct: 80  EAG----------YLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQD 129

Query: 217 GNPR------------FAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPIL 264
              R             + +S+T+F           WV L C   A  +    G  W   
Sbjct: 130 SVTRPTTGGAPSPGNYLSDVSATVF--------LAVWVPLFCSFGAMLVYPENGSGWVFC 181

Query: 265 L---------GGLPHWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY 314
           +         GG      FG+  +  +ISPKK+WEG   G   C  T  +++  F   + 
Sbjct: 182 MMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG-FAGSLVCGITATIITATFLVGKT 240

Query: 315 LPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYS 374
                + G L    +  GDL ES +KRD G+KD G L+PGHGG++DR+D  I   A+A  
Sbjct: 241 PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDG-ILPSAVAAW 299

Query: 375 FVKTFLP 381
            V T LP
Sbjct: 300 IVLTLLP 306

Mycobacterium bovis (taxid: 1765)

EC: 2

EC: .

EC: 7

EC: .

EC: 7

EC: .

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	385
255541190	404	Phosphatidate cytidylyltransferase, puta	0.963	0.918	0.691	1e-150
296089206	397	unnamed protein product [Vitis vinifera]	0.966	0.937	0.675	1e-139
359489454	402	PREDICTED: phosphatidate cytidylyltransf	0.966	0.925	0.669	1e-138
145361012	430	cytidinediphosphate diacylglycerol synth	0.948	0.848	0.647	1e-135
15292689	391	putative phosphatidate cytidylyltransfer	0.948	0.933	0.647	1e-135
297824557	403	hypothetical protein ARALYDRAFT_483649 [	0.950	0.908	0.642	1e-134
42571237	382	cytidinediphosphate diacylglycerol synth	0.924	0.931	0.632	1e-132
449510780	406	PREDICTED: phosphatidate cytidylyltransf	0.974	0.923	0.621	1e-132
15232383	399	cytidinediphosphate diacylglycerol synth	0.958	0.924	0.636	1e-132
449445455	406	PREDICTED: phosphatidate cytidylyltransf	0.974	0.923	0.618	1e-131

>gi|255541190|ref|XP_002511659.1| Phosphatidate cytidylyltransferase, putative [Ricinus communis] gi|223548839|gb|EEF50328.1| Phosphatidate cytidylyltransferase, putative [Ricinus communis]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 276/399 (69%), Positives = 308/399 (77%), Gaps = 28/399 (7%)

Query: 12  HLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMI 71
           +L+ L +T L A PC P S K  I  Q+   K+++R+V N  K    V    +   R +I
Sbjct: 9   NLVPLSVTCLCARPCLPLSKKTQILPQRCS-KISLRLVLNGSKAAFPVHTNSLSAMRLLI 67

Query: 72  SAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVG 131
           +A+ARAEPD L   + KE +D G+    SE+S+ ++  Q+K SQL KRI FGLGIGI VG
Sbjct: 68  TAIARAEPDRLGQEDEKEEVDKGNNFPKSEESIVET--QKKGSQLTKRIVFGLGIGISVG 125

Query: 132 GVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILT 191
           GVV+AGGWVFTV  AAAVFVG+REYFELVRSRGI A MTPPPRYVSRVCSVICA MP+LT
Sbjct: 126 GVVMAGGWVFTVALAAAVFVGSREYFELVRSRGITARMTPPPRYVSRVCSVICALMPLLT 185

Query: 192 LYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAP 251
           LY GQID+ VTFAAFVVAMALLLQRGNPRFAQLSST+FGLFYCGYLPCFWVKLRCGL+ P
Sbjct: 186 LYNGQIDIPVTFAAFVVAMALLLQRGNPRFAQLSSTMFGLFYCGYLPCFWVKLRCGLAVP 245

Query: 252 ALNTGIGVSWPILLGGLPHWT-------------------------AFGRTQLTSISPKK 286
           ALNT IG +WP+L GG  HWT                         AFGRT LTSISPKK
Sbjct: 246 ALNTRIGATWPVLFGGQAHWTVGLVATLISMSSIIAADTYAFMGGKAFGRTPLTSISPKK 305

Query: 287 TWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVK 346
           TWEGTIVGLGGCIAT+V+LS+IFCWP  L SAI FGFLNFFGSVFGDLTESMIKRDAGVK
Sbjct: 306 TWEGTIVGLGGCIATSVILSRIFCWPTSLLSAIAFGFLNFFGSVFGDLTESMIKRDAGVK 365

Query: 347 DSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           DSGSLIPGHGGILDRVDSY+FTGALAYSFVKTFLPLYGV
Sbjct: 366 DSGSLIPGHGGILDRVDSYMFTGALAYSFVKTFLPLYGV 404

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089206|emb|CBI38909.3| unnamed protein product [Vitis vinifera]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/410 (67%), Positives = 309/410 (75%), Gaps = 38/410 (9%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MAS++EIDR   LI L +  L   PCR  S+K L+ T+    K ++ +V + P+   R+ 
Sbjct: 1   MASYIEIDRYG-LIPLAVAPL---PCRRPSSKTLVLTRPSS-KFSLGLVLHGPRTVFRI- 54

Query: 61  QTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRI 120
                 +RR I+AVAR EPD   + + +E +D G KL ++E  VS+   QQK SQ +KR+
Sbjct: 55  -----NSRRFITAVARTEPDRRGEDSAREEVDKGLKLPINEDLVSEH--QQKESQFKKRV 107

Query: 121 GFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVC 180
            FGLGIGI VGGVVLAGGWVFT   AAAVF+GAREYFELVRS GI AGMTPPPRYVSRVC
Sbjct: 108 VFGLGIGILVGGVVLAGGWVFTAALAAAVFIGAREYFELVRSHGITAGMTPPPRYVSRVC 167

Query: 181 SVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF 240
           SVICA MP+LTLYFG IDVSVT AAF VAMALLLQRGNPRFAQLSS +FGLFYCGYLPCF
Sbjct: 168 SVICAVMPLLTLYFGNIDVSVTSAAFFVAMALLLQRGNPRFAQLSSAMFGLFYCGYLPCF 227

Query: 241 WVKLRCGLSAPALNTGIGVSWPILLGGLPHWT-------------------------AFG 275
           WVKLRCGL+APALNT IG +WP LLGG  HWT                         AFG
Sbjct: 228 WVKLRCGLAAPALNTRIGTAWPFLLGGQAHWTVGLVVTLISISSIIAADTYAFLGGKAFG 287

Query: 276 RTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLT 335
           RT LT+ISPKKTWEG I GLGGCIAT+V+LSKIF WP  L SAI FGFLNFFGS+FGDLT
Sbjct: 288 RTPLTNISPKKTWEGVIAGLGGCIATSVILSKIFRWPTSLSSAIAFGFLNFFGSLFGDLT 347

Query: 336 ESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           ESMIKRDAGVKDSGSLIPGHGGILDR DSYIFTGALAYSFVKTFLPLYGV
Sbjct: 348 ESMIKRDAGVKDSGSLIPGHGGILDRADSYIFTGALAYSFVKTFLPLYGV 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489454|ref|XP_002281170.2| PREDICTED: phosphatidate cytidylyltransferase [Vitis vinifera]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 278/415 (66%), Positives = 310/415 (74%), Gaps = 43/415 (10%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MAS++EIDR   LI L +  L   PCR  S+K L+ T+    K ++ +V + P+   R+ 
Sbjct: 1   MASYIEIDRYG-LIPLAVAPL---PCRRPSSKTLVLTRPSS-KFSLGLVLHGPRTVFRI- 54

Query: 61  QTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRI 120
                 +RR I+AVAR EPD   + + +E +D G KL ++E  VS+   QQK SQ +KR+
Sbjct: 55  -----NSRRFITAVARTEPDRRGEDSAREEVDKGLKLPINEDLVSEH--QQKESQFKKRV 107

Query: 121 GFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVC 180
            FGLGIGI VGGVVLAGGWVFT   AAAVF+GAREYFELVRS GI AGMTPPPRYVSRVC
Sbjct: 108 VFGLGIGILVGGVVLAGGWVFTAALAAAVFIGAREYFELVRSHGITAGMTPPPRYVSRVC 167

Query: 181 SVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF 240
           SVICA MP+LTLYFG IDVSVT AAF VAMALLLQRGNPRFAQLSS +FGLFYCGYLPCF
Sbjct: 168 SVICAVMPLLTLYFGNIDVSVTSAAFFVAMALLLQRGNPRFAQLSSAMFGLFYCGYLPCF 227

Query: 241 WVKLRCGLSAPALNT-----GIGVSWPILLGGLPHWT----------------------- 272
           WVKLRCGL+APALNT     GIG +WP LLGG  HWT                       
Sbjct: 228 WVKLRCGLAAPALNTRLFLVGIGTAWPFLLGGQAHWTVGLVVTLISISSIIAADTYAFLG 287

Query: 273 --AFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSV 330
             AFGRT LT+ISPKKTWEG I GLGGCIAT+V+LSKIF WP  L SAI FGFLNFFGS+
Sbjct: 288 GKAFGRTPLTNISPKKTWEGVIAGLGGCIATSVILSKIFRWPTSLSSAIAFGFLNFFGSL 347

Query: 331 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           FGDLTESMIKRDAGVKDSGSLIPGHGGILDR DSYIFTGALAYSFVKTFLPLYGV
Sbjct: 348 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRADSYIFTGALAYSFVKTFLPLYGV 402

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145361012|ref|NP_566035.2| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana] gi|330255421|gb|AEC10515.1| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana]

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/411 (64%), Positives = 304/411 (73%), Gaps = 46/411 (11%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRV 59
           MA+F E+        +  TS   CPCR  + K LI    +PP   +R+  + +P F  R 
Sbjct: 40  MATFAEL--------VLSTSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLF--RS 85

Query: 60  RQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
               I  +RR ++AVARAE D L D +  +GID  H L    ++V D   Q+KASQL+KR
Sbjct: 86  GLGRISVSRRFLTAVARAESDQLGDDDHSKGIDRIHNL----QNVEDK--QKKASQLKKR 139

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGWVFTV  A++VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 140 VIFGIGIGLPVGCVVLAGGWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 199

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAFVVA+ALL+QRG+PRFAQLSST+FGLFYCGYLP 
Sbjct: 200 CSVICALMPILTLYFGNIDILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPS 259

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWT-------------------------AF 274
           FWVKLRCGL+APALNTGIG +WPILLGG  HWT                          F
Sbjct: 260 FWVKLRCGLAAPALNTGIGRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTF 319

Query: 275 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 334
           GRT LTSISPKKTWEGTIVGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDL
Sbjct: 320 GRTPLTSISPKKTWEGTIVGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDL 379

Query: 335 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct: 380 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 430

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15292689|gb|AAK92713.1| putative phosphatidate cytidylyltransferase [Arabidopsis thaliana]

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/411 (64%), Positives = 304/411 (73%), Gaps = 46/411 (11%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRV 59
           MA+F E+        +  TS   CPCR  + K LI    +PP   +R+  + +P F  R 
Sbjct: 1   MATFAEL--------VLSTSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLF--RS 46

Query: 60  RQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
               I  +RR ++AVARAE D L D +  +GID  H L    ++V D   Q+KASQL+KR
Sbjct: 47  GLGRISVSRRFLTAVARAESDQLGDDDHSKGIDRIHNL----QNVEDK--QKKASQLKKR 100

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGWVFTV  A++VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 101 VIFGIGIGLPVGCVVLAGGWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 160

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAFVVA+ALL+QRG+PRFAQLSST+FGLFYCGYLP 
Sbjct: 161 CSVICALMPILTLYFGNIDILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPS 220

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWT-------------------------AF 274
           FWVKLRCGL+APALNTGIG +WPILLGG  HWT                          F
Sbjct: 221 FWVKLRCGLAAPALNTGIGRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTF 280

Query: 275 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 334
           GRT LTSISPKKTWEGTIVGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDL
Sbjct: 281 GRTPLTSISPKKTWEGTIVGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDL 340

Query: 335 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct: 341 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 391

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824557|ref|XP_002880161.1| hypothetical protein ARALYDRAFT_483649 [Arabidopsis lyrata subsp. lyrata] gi|297326000|gb|EFH56420.1| hypothetical protein ARALYDRAFT_483649 [Arabidopsis lyrata subsp. lyrata]

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/422 (64%), Positives = 302/422 (71%), Gaps = 56/422 (13%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MASF E+     ++S   TS   CPCR  S K LI     PP   +R+V    K   R  
Sbjct: 1   MASFAEL-----VLS---TSRCTCPCRSFSKKPLIL----PPLSGLRLVGGDTKPLFRSG 48

Query: 61  QTGIDTNRRMISAVARAEPDHL-DDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
              +   RR ++AVARAE D L DD N KE ID  H L    ++V D   Q+K SQL+KR
Sbjct: 49  LGPVSVKRRFLTAVARAESDQLGDDDNAKE-IDRIHDL----QNVEDK--QKKPSQLKKR 101

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGW FTV  AA+VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 102 VIFGIGIGLPVGCVVLAGGWFFTVALAASVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 161

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAF+VA+ALL+QRG+PRFAQLSST+FGLFYCGYLPC
Sbjct: 162 CSVICAVMPILTLYFGNIDILVTSAAFLVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPC 221

Query: 240 FWVKLRCGLSAPALNTG-----------IGVSWPILLGGLPHWT---------------- 272
           FWVKLRCGL+APALNTG           IG +WPILLGG  HWT                
Sbjct: 222 FWVKLRCGLAAPALNTGKLSPFISLKFSIGKTWPILLGGQAHWTVGLVATLISFSGVIAT 281

Query: 273 ---------AFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGF 323
                    AFGRT LTSISPKKTWEGT VGL GCIA T++LSK   WP+ L S+I FGF
Sbjct: 282 DTFAFLGGKAFGRTPLTSISPKKTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGF 341

Query: 324 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY 383
           LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LY
Sbjct: 342 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLRLY 401

Query: 384 GV 385
           GV
Sbjct: 402 GV 403

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571237|ref|NP_973692.1| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana] gi|111074402|gb|ABH04574.1| At2g45150 [Arabidopsis thaliana] gi|222423214|dbj|BAH19584.1| AT2G45150 [Arabidopsis thaliana] gi|330255422|gb|AEC10516.1| cytidinediphosphate diacylglycerol synthase 4 [Arabidopsis thaliana]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/411 (63%), Positives = 300/411 (72%), Gaps = 55/411 (13%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRV 59
           MA+F E+     ++S   TS   CPCR  + K LI    +PP   +R+  + +P F  R 
Sbjct: 1   MATFAEL-----VLS---TSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLF--RS 46

Query: 60  RQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKR 119
               I  +RR ++AVARAE D L D +  + +++                Q+KASQL+KR
Sbjct: 47  GLGRISVSRRFLTAVARAESDQLGDDDHSKNVED---------------KQKKASQLKKR 91

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           + FG+GIG+ VG VVLAGGWVFTV  A++VF+G+REYFELVRSRGIA GMTPPPRYVSRV
Sbjct: 92  VIFGIGIGLPVGCVVLAGGWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRV 151

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
           CSVICA MPILTLYFG ID+ VT AAFVVA+ALL+QRG+PRFAQLSST+FGLFYCGYLP 
Sbjct: 152 CSVICALMPILTLYFGNIDILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPS 211

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWT-------------------------AF 274
           FWVKLRCGL+APALNTGIG +WPILLGG  HWT                          F
Sbjct: 212 FWVKLRCGLAAPALNTGIGRTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKTF 271

Query: 275 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 334
           GRT LTSISPKKTWEGTIVGL GCIA T++LSK   WP+ L S++ FGFLNFFGSVFGDL
Sbjct: 272 GRTPLTSISPKKTWEGTIVGLVGCIAITILLSKYLSWPQSLFSSVAFGFLNFFGSVFGDL 331

Query: 335 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYGV
Sbjct: 332 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYGV 382

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449510780|ref|XP_004163756.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/409 (62%), Positives = 299/409 (73%), Gaps = 34/409 (8%)

Query: 3   SFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVF-NRPKFTLRVRQ 61
           SF + D C  +  L  +S  ACP R SS+K L F    PP   +  +F +  K  LR+  
Sbjct: 6   SFPDFD-CFKVAPLSFSSPCACPLRLSSSKPLPF----PPAHRLHFIFLHGQKGPLRINN 60

Query: 62  TGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIG 121
                 RR I AVA AEPD +D    ++ ++ G +L   E  +++   Q K +QL+KR+ 
Sbjct: 61  RS-GLARRHIVAVAHAEPDRIDGKEPQQEVEGGQQLSFQEDPITEH--QHKKNQLKKRVV 117

Query: 122 FGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCS 181
           FG+GIGI  G VVLAGGWVFTV  AA +FVGAREYFELVRSRGI AGMTPPPRYVSR+CS
Sbjct: 118 FGIGIGITGGIVVLAGGWVFTVAVAACIFVGAREYFELVRSRGITAGMTPPPRYVSRICS 177

Query: 182 VICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFW 241
           VICAFMPIL+ YFGQ+DV++TF+AF++A+ LLLQRGNPRFAQLSS IFGLFYCGYLPCFW
Sbjct: 178 VICAFMPILSFYFGQLDVAITFSAFILAITLLLQRGNPRFAQLSSAIFGLFYCGYLPCFW 237

Query: 242 VKLRCGLSAPALNTGIGVSWPILLGGLPHWT-------------------------AFGR 276
           VKLRCGL+ PA+NT IG  WP LLGG  HWT                         AFG+
Sbjct: 238 VKLRCGLAVPAVNTEIGAGWPFLLGGRAHWTVGLVATLISMSSIIAADTFAFLGGKAFGK 297

Query: 277 TQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 336
           T LT++SPKKTWEGTI+GLGGCIAT+V+LSKI  WP  + SAI FGFLNF GSVFGDLTE
Sbjct: 298 TPLTNVSPKKTWEGTIMGLGGCIATSVILSKILSWPSSMISAIAFGFLNFLGSVFGDLTE 357

Query: 337 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           SMIKRDAGVKDSGSLIPGHGG+LDRVDSYIF+GALAYS++K F+PLYGV
Sbjct: 358 SMIKRDAGVKDSGSLIPGHGGLLDRVDSYIFSGALAYSYIKAFMPLYGV 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232383|ref|NP_191621.1| cytidinediphosphate diacylglycerol synthase 5 [Arabidopsis thaliana] gi|7329672|emb|CAB82666.1| phosphatidate cytidylyltransferase-like protein [Arabidopsis thaliana] gi|14334690|gb|AAK59523.1| putative phosphatidate cytidylyltransferase [Arabidopsis thaliana] gi|16323392|gb|AAL15190.1| putative phosphatidate cytidylyltransferase [Arabidopsis thaliana] gi|332646568|gb|AEE80089.1| cytidinediphosphate diacylglycerol synthase 5 [Arabidopsis thaliana]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/415 (63%), Positives = 297/415 (71%), Gaps = 46/415 (11%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILI---FTQKQPPKLNVRIVFNRPKFTL 57
           MA FVE+ R   L  L L+SL  CPCR S  K LI   F++K P  L      +  +FT 
Sbjct: 1   MAPFVEVCRYKPL-PLSLSSLCTCPCRSSPRKYLILPQFSEKYPKPL-----LSHSRFT- 53

Query: 58  RVRQTGIDTNRRMISAVARAEPDHL-DDGNLKEGIDNGHKLV-VSEKSVSDSGSQQKASQ 115
                 I  NRR+I+AVARAE + + DD N KE  +   +L  V E S  D   Q+  SQ
Sbjct: 54  -----PISVNRRVITAVARAESNQIGDDANSKEEHNIDQELQNVEEDSSLDDQKQKSRSQ 108

Query: 116 LRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRY 175
            +KR+ FGLGIG+ VGG+VLAGGWVFTV  AAAV + AREYFELVRS+GIA GMTPPPRY
Sbjct: 109 FKKRVTFGLGIGLSVGGIVLAGGWVFTVAVAAAVLLSAREYFELVRSKGIAQGMTPPPRY 168

Query: 176 VSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCG 235
           +SRVCS+ICA MPILTLYFG ID+S+T AAFVVAMALLLQRGNPRF+QLSST+FGLFYCG
Sbjct: 169 LSRVCSIICALMPILTLYFGHIDISITSAAFVVAMALLLQRGNPRFSQLSSTMFGLFYCG 228

Query: 236 YLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWT----------------------- 272
           YLPCFWVKLRCGL+AP LNTGIG SWP +LGG  HWT                       
Sbjct: 229 YLPCFWVKLRCGLTAPVLNTGIGRSWPTILGGQAHWTVGLVAILISFCGIIASDTFAFLG 288

Query: 273 --AFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSV 330
             AFGRT L SISPKKTWEG   GL GCI+ T++LSK   WP+ L S I FG LNFFGSV
Sbjct: 289 GKAFGRTPLISISPKKTWEGAFAGLVGCISITILLSKSLSWPQSLVSTIAFGVLNFFGSV 348

Query: 331 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV+    L+GV
Sbjct: 349 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVR----LHGV 399

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445455|ref|XP_004140488.1| PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis sativus]

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/409 (61%), Positives = 298/409 (72%), Gaps = 34/409 (8%)

Query: 3   SFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVF-NRPKFTLRVRQ 61
           SF + D C  +  L  +S  ACP R SS+K L      PP   +  +F +  K  LR+  
Sbjct: 6   SFPDFD-CFKVAPLSFSSPCACPLRLSSSKPLPL----PPAHRLHFIFLHGQKGPLRINN 60

Query: 62  TGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIG 121
                 RR I AVA AEPD +D    ++ ++ G +L   E  +++   Q K +QL+KR+ 
Sbjct: 61  RS-GLARRHIVAVAHAEPDRIDGKEPQQEVEGGQQLSFQEDPITEH--QHKKNQLKKRVV 117

Query: 122 FGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCS 181
           FG+GIGI  G VVLAGGWVFTV  AA +FVGAREYFELVRSRGI AGMTPPPRYVSR+CS
Sbjct: 118 FGIGIGITGGIVVLAGGWVFTVAVAACIFVGAREYFELVRSRGITAGMTPPPRYVSRICS 177

Query: 182 VICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFW 241
           VICAFMPIL+ YFGQ+DV++TF+AF++A+ LLLQRGNPRFAQLSS IFGLFYCGYLPCFW
Sbjct: 178 VICAFMPILSFYFGQLDVAITFSAFILAITLLLQRGNPRFAQLSSAIFGLFYCGYLPCFW 237

Query: 242 VKLRCGLSAPALNTGIGVSWPILLGGLPHWT-------------------------AFGR 276
           VKLRCGL+ PA+NT IG  WP LLGG  HWT                         AFG+
Sbjct: 238 VKLRCGLAVPAVNTEIGAGWPFLLGGRAHWTVGLVATLISMSSIIAADTFAFLGGKAFGK 297

Query: 277 TQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 336
           T LT++SPKKTWEGTI+GLGGCIAT+V+LSKI  WP  + SAI FGFLNF GSVFGDLTE
Sbjct: 298 TPLTNVSPKKTWEGTIMGLGGCIATSVILSKILSWPSSMISAIAFGFLNFLGSVFGDLTE 357

Query: 337 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYGV 385
           SMIKRDAGVKDSGSLIPGHGG+LDRVDSYIF+GALAYS++K F+PLYGV
Sbjct: 358 SMIKRDAGVKDSGSLIPGHGGLLDRVDSYIFSGALAYSYIKAFMPLYGV 406

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	385
TAIR|locus:2055627	430	CDS4 "AT2G45150" [Arabidopsis	0.690	0.618	0.503	2.4e-110
TAIR|locus:2101786	399	CDS5 "AT3G60620" [Arabidopsis	0.683	0.659	0.503	7.2e-107
TIGR_CMR|CBU_1381	272	CBU_1381 "phosphatidate cytidy	0.327	0.463	0.428	1.2e-21
TIGR_CMR|DET_0372	267	DET_0372 "phosphatidate cytidy	0.402	0.580	0.359	5.7e-20
TIGR_CMR|ECH_0269	211	ECH_0269 "putative phosphatida	0.251	0.459	0.489	1.6e-19
TIGR_CMR|APH_0113	235	APH_0113 "putative phosphatida	0.267	0.438	0.432	3.6e-17
UNIPROTKB|P0ABG1	285	cdsA "CDP-diglyceride syntheta	0.225	0.305	0.5	2.5e-15
UNIPROTKB|P63758	306	cdsA "Phosphatidate cytidylylt	0.361	0.454	0.350	9.1e-15
TIGR_CMR|CJE_1536	241	CJE_1536 "phosphatidate cytidy	0.231	0.369	0.478	9.8e-15
TIGR_CMR|GSU_1916	276	GSU_1916 "phosphatidate cytidy	0.249	0.347	0.467	2.6e-14

TAIR|locus:2055627 CDS4 "AT2G45150" [Arabidopsis thaliana (taxid:3702)]

 Score = 617 (222.3 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
 Identities = 141/280 (50%), Positives = 163/280 (58%)

Query:    19 TSLNACPCRPSSNKILIFTQKQPPKLNVRIVFN-RPKFTLRVRQTGIDTNRRMISAVARA 77
             TS   CPCR  + K LI    +PP   +R+  + +P F   + +  I  +RR ++AVARA
Sbjct:    50 TSRCTCPCRSFTRKPLI----RPPLSGLRLPGDTKPLFRSGLGR--ISVSRRFLTAVARA 103

Query:    78 EPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRXXXXXXXXXXXXXXXXXX 137
             E D L D +  +GID  H L    ++V D   Q+KASQL+KR                  
Sbjct:   104 ESDQLGDDDHSKGIDRIHNL----QNVEDK--QKKASQLKKRVIFGIGIGLPVGCVVLAG 157

Query:   138 XWXXXXXXXXXXXXXXREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQI 197
              W              REYFELVRSRGIA GMTPPPRYVSRVCSVICA MPILTLYFG I
Sbjct:   158 GWVFTVALASSVFIGSREYFELVRSRGIAKGMTPPPRYVSRVCSVICALMPILTLYFGNI 217

Query:   198 DXXXXXXXXXXXXXXXXQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGI 257
             D                QRG+PRFAQLSST+FGLFYCGYLP FWVKLRCGL+APALNTGI
Sbjct:   218 DILVTSAAFVVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPSFWVKLRCGLAAPALNTGI 277

Query:   258 GVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGG 297
             G +WPILLGG  HWT      L S S     + T   LGG
Sbjct:   278 GRTWPILLGGQAHWTVGLVATLISFSGVIATD-TFAFLGG 316

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS;IMP

GO:0005886 "plasma membrane" evidence=ISM

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009536 "plastid" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

TAIR|locus:2101786 CDS5 "AT3G60620" [Arabidopsis thaliana (taxid:3702)]

 Score = 636 (228.9 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
 Identities = 138/274 (50%), Positives = 161/274 (58%)

Query:     1 MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
             MA FVE+ R   L  L L+SL  CPCR S  K LI      P+ + +  + +P  +   R
Sbjct:     1 MAPFVEVCRYKPL-PLSLSSLCTCPCRSSPRKYLIL-----PQFSEK--YPKPLLS-HSR 51

Query:    61 QTGIDTNRRMISAVARAEPDHL-DDGNLKEGIDNGHKLV-VSEKSVSDSGSQQKASQLRK 118
              T I  NRR+I+AVARAE + + DD N KE  +   +L  V E S  D   Q+  SQ +K
Sbjct:    52 FTPISVNRRVITAVARAESNQIGDDANSKEEHNIDQELQNVEEDSSLDDQKQKSRSQFKK 111

Query:   119 RXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXREYFELVRSRGIAAGMTPPPRYVSR 178
             R                   W              REYFELVRS+GIA GMTPPPRY+SR
Sbjct:   112 RVTFGLGIGLSVGGIVLAGGWVFTVAVAAAVLLSAREYFELVRSKGIAQGMTPPPRYLSR 171

Query:   179 VCSVICAFMPILTLYFGQIDXXXXXXXXXXXXXXXXQRGNPRFAQLSSTIFGLFYCGYLP 238
             VCS+ICA MPILTLYFG ID                QRGNPRF+QLSST+FGLFYCGYLP
Sbjct:   172 VCSIICALMPILTLYFGHIDISITSAAFVVAMALLLQRGNPRFSQLSSTMFGLFYCGYLP 231

Query:   239 CFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWT 272
             CFWVKLRCGL+AP LNTGIG SWP +LGG  HWT
Sbjct:   232 CFWVKLRCGLTAPVLNTGIGRSWPTILGGQAHWT 265

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS;IMP

GO:0005886 "plasma membrane" evidence=ISM

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0010207 "photosystem II assembly" evidence=RCA

TIGR_CMR|CBU_1381 CBU_1381 "phosphatidate cytidylyltransferase" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 224 (83.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 60/140 (42%), Positives = 77/140 (55%)

Query:   240 FWVKLRCGLSAPALNTGIG-VSWPILLGGLPHWT------AFGR-----TQLTSISPKKT 287
             F+  + C L+  AL   IG   W +L G +  W+      A GR     T +  +SPKKT
Sbjct:   119 FFALISCWLAINALREDIGGPGW-LLFGLMLVWSMDTGAYAAGRLWGKHTLIARVSPKKT 177

Query:   288 WEGTIVGLGGCIATTVVLSKIFCWP-RYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVK 346
             WEG   G+   +   V+   +F  P   L   I+   +  F +V GDL ESM+KR AGVK
Sbjct:   178 WEGLGGGIILSLLIAVIGGILFHLPFSQLSLVILLALITVFFAVIGDLFESMLKRQAGVK 237

Query:   347 DSGSLIPGHGGILDRVDSYI 366
             DSG L+PGHGGILDRVDS I
Sbjct:   238 DSGRLLPGHGGILDRVDSLI 257

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|DET_0372 DET_0372 "phosphatidate cytidylyltransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 60/167 (35%), Positives = 87/167 (52%)

Query:   221 FAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAF------ 274
             F + + T+ G+ Y G L  FWV LR     P       V W ++L       AF      
Sbjct:   105 FPRWAWTLSGVIYIGLLSSFWVALR---ELPMGREW--VLWTLILTAATDTMAFFIGSRF 159

Query:   275 GRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGD 333
             G+ ++  SISP K+W+G I G    I    + + +   P  +  A++ G L       GD
Sbjct:   160 GKQKMAPSISPNKSWQGAIGGAVFSIIVAPIFADLLGLPINVFVAMLIGLLVSVAGQTGD 219

Query:   334 LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
             + ES+ KR+   KDSG+LIPGHGGI+DR+DS +FTG + Y +V  F+
Sbjct:   220 IAESLFKRNMHCKDSGNLIPGHGGIMDRLDSLLFTGIVVYYYVIWFI 266

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|ECH_0269 ECH_0269 "putative phosphatidate cytidylyltransferase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]

 Score = 211 (79.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
 Identities = 48/98 (48%), Positives = 61/98 (62%)

Query:   282 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKR 341
             ISP KTW G   G+      +VV+S IF    ++  A + G L  F +  GD+TES +KR
Sbjct:   109 ISPNKTWAGLFGGIVAGAFISVVISVIF-GIFFVFHAFIAGILIAFVAQVGDITESYVKR 167

Query:   342 DAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 379
                VKDSGS IPGHGGILDR+DS+IFT  L   +V+ F
Sbjct:   168 LCKVKDSGSFIPGHGGILDRMDSFIFTAPLVAYYVQKF 205

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

TIGR_CMR|APH_0113 APH_0113 "putative phosphatidate cytidylyltransferase" [Anaplasma phagocytophilum HZ (taxid:212042)]

 Score = 212 (79.7 bits), Expect = 3.6e-17, P = 3.6e-17
 Identities = 45/104 (43%), Positives = 65/104 (62%)

Query:   276 RTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLT 335
             R  + +ISP KTW G   G+     +T+V+S IF    Y+P +I+ G +    +  GD+T
Sbjct:   127 RKIIPAISPGKTWVGLWAGIAFSAVSTLVMSVIF-GIFYVPHSILIGAVIAVVAQCGDVT 185

Query:   336 ESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 379
             ES +KR   VKDSG ++PGHGG++DR+D +IFT  L   +VK F
Sbjct:   186 ESAVKRMCKVKDSGFIVPGHGGVMDRMDGFIFTAPLVAYYVKHF 229

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

UNIPROTKB|P0ABG1 cdsA "CDP-diglyceride synthetase" [Escherichia coli K-12 (taxid:83333)]

 Score = 204 (76.9 bits), Expect = 2.5e-15, P = 2.5e-15
 Identities = 48/96 (50%), Positives = 61/96 (63%)

Query:   274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIF-CWPRY--LP-SAIVFGFLNFFG 328
             FG+ +L   +SP KTW+G I GL    AT  V+S  +  W      P + ++   +    
Sbjct:   175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230

Query:   329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
             SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct:   231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016024 "CDP-diacylglycerol biosynthetic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016779 "nucleotidyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

UNIPROTKB|P63758 cdsA "Phosphatidate cytidylyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 204 (76.9 bits), Expect = 9.1e-15, P = 9.1e-15
 Identities = 53/151 (35%), Positives = 72/151 (47%)

Query:   241 WVKLRCGLSAPALNTGIGVSWPILL---------GGLPHWTAFGRTQLT-SISPKKTWEG 290
             WV L C   A  +    G  W   +         GG      FG+  +  +ISPKK+WEG
Sbjct:   158 WVPLFCSFGAMLVYPENGSGWVFCMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG 217

Query:   291 TIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGS 350
                G   C  T  +++  F   +      + G L    +  GDL ES +KRD G+KD G 
Sbjct:   218 -FAGSLVCGITATIITATFLVGKTPWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGR 276

Query:   351 LIPGHGGILDRVDSYIFTGALAYSFVKTFLP 381
             L+PGHGG++DR+D  I   A+A   V T LP
Sbjct:   277 LLPGHGGLMDRLDG-ILPSAVAAWIVLTLLP 306

GO:0005618 "cell wall" evidence=IDA

GO:0040007 "growth" evidence=IMP

TIGR_CMR|CJE_1536 CJE_1536 "phosphatidate cytidylyltransferase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 191 (72.3 bits), Expect = 9.8e-15, P = 9.8e-15
 Identities = 44/92 (47%), Positives = 57/92 (61%)

Query:   275 GRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL 334
             G+T  +  SP KT EG I GL  C +    +  +F +  +L     F F+  F +V GDL
Sbjct:   143 GKTPFSPTSPNKTLEGVIGGLI-CASVIGTILGVFVYSFWLSLLCSF-FVAIF-AVIGDL 199

Query:   335 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 366
              ES  KR+AGVKDSG LIPGHGG+LDR+D+ I
Sbjct:   200 LESYFKREAGVKDSGDLIPGHGGMLDRIDAVI 231

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

TIGR_CMR|GSU_1916 GSU_1916 "phosphatidate cytidylyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 196 (74.1 bits), Expect = 2.6e-14, P = 2.6e-14
 Identities = 50/107 (46%), Positives = 67/107 (62%)

Query:   275 GRTQL-TSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY-----LPSAIVFGFLNFFG 328
             GR +L  S+SP K+ EG I GL G +A T V    F +P       + +A++ G L   G
Sbjct:   167 GRRKLYPSVSPNKSVEGAIGGLLGSLAGTFVARLTF-FPGLTVLDCIATALLLGVL---G 222

Query:   329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF 375
              V GDL ES++KR  GVKDSG+++PGHGGILDR+DS +F    AY +
Sbjct:   223 QV-GDLFESLLKRSFGVKDSGTIVPGHGGILDRLDSILFAVPAAYYY 268

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.7.41	LOW CONFIDENCE prediction!
3rd Layer	2.7.7	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	385
PLN02953	403	PLN02953, PLN02953, phosphatidate cytidylyltransfe	1e-171
pfam01148	259	pfam01148, CTP_transf_1, Cytidylyltransferase fami	5e-48
COG0575	265	COG0575, CdsA, CDP-diglyceride synthetase [Lipid m	5e-29
PRK11624	285	PRK11624, cdsA, CDP-diglyceride synthase; Provisio	7e-22
COG4589	303	COG4589, COG4589, Predicted CDP-diglyceride synthe	5e-20
PLN02594	342	PLN02594, PLN02594, phosphatidate cytidylyltransfe	2e-12
PRK04032	159	PRK04032, PRK04032, hypothetical protein; Provisio	5e-06

>gnl|CDD|178539 PLN02953, PLN02953, phosphatidate cytidylyltransferase

 Score =  482 bits (1242), Expect = e-171
 Identities = 268/421 (63%), Positives = 299/421 (71%), Gaps = 54/421 (12%)

Query: 1   MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVR 60
           MASF E+        +  TS   CPCR  S K LI     PP   +R+V    K   R  
Sbjct: 1   MASFAEL--------VLSTSRCTCPCRSFSKKPLI----LPPLSGLRLVGGDTKPLFRSG 48

Query: 61  QTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRI 120
              I   RR ++AVARAE D L D +  + ID  H L    ++V D   Q+KASQL+KR+
Sbjct: 49  LGPISVKRRFLTAVARAESDQLGDDDHAKEIDRIHDL----QNVEDK--QKKASQLKKRV 102

Query: 121 GFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVC 180
            FG+GIG+ VG VVLAGGW FTV  AA+VF+G+REYFELVRSRGIA GMTPPPRYVSRVC
Sbjct: 103 IFGIGIGLPVGCVVLAGGWFFTVALAASVFIGSREYFELVRSRGIAKGMTPPPRYVSRVC 162

Query: 181 SVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF 240
           SVICA MPILTLYFG ID+ VT AAF+VA+ALL+QRG+PRFAQLSST+FGLFYCGYLPCF
Sbjct: 163 SVICALMPILTLYFGNIDILVTSAAFLVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPCF 222

Query: 241 WVKLRCGLSAPALNTG-----------IGVSWPILLGGLPHWT----------------- 272
           WVKLRCGL+APALNTG           IG +WPILLGG  HWT                 
Sbjct: 223 WVKLRCGLAAPALNTGKLSPFISLKFSIGKTWPILLGGQAHWTVGLVATLISFSGVIATD 282

Query: 273 --------AFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFL 324
                   AFGRT LTSISPKKTWEGT VGL GCIA T++LSK   WP+ L S+I FGFL
Sbjct: 283 TFAFLGGKAFGRTPLTSISPKKTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGFL 342

Query: 325 NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLYG 384
           NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSF+KT L LYG
Sbjct: 343 NFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFIKTSLKLYG 402

Query: 385 V 385
           V
Sbjct: 403 V 403

Length = 403

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family

 Score =  163 bits (414), Expect = 5e-48
 Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 14/267 (5%)

Query: 118 KRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVS 177
           +RI   + + +    ++  G  +F +  AA + +   E   L+R +  +         ++
Sbjct: 2   QRIITHIVLILIFLILLFLGPLIFLLLVAAIIILALYELIRLLRLKFSS-----RLLLLT 56

Query: 178 RVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYL 237
           R   +I   + +L +Y   +         V+ +  LL      + ++SST+  LFY G  
Sbjct: 57  RGLGLIFYLLGLLLVYGEGLLALFGLVLLVIPVLWLLVLPVLAYHRVSSTLLPLFYVGLF 116

Query: 238 PCFWVKLRCGLSAPALNTGIGVSW--PIL--LGGLPHWTAFGRTQLT-SISPKKTWEGTI 292
               +              I V W   I     G     AFG+ +L   ISP KTWEG +
Sbjct: 117 LSLLLITNPFFGLLWALLLILVVWASDIGAYFVG----KAFGKHKLAPKISPNKTWEGFL 172

Query: 293 VGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLI 352
            G    +   ++ S +         A++ G L      FGDL ES  KRD G+KDSG LI
Sbjct: 173 GGFVAAVLVGLLFSLLLGPYPSPLHALLLGLLASLVGQFGDLVESGFKRDFGIKDSGKLI 232

Query: 353 PGHGGILDRVDSYIFTGALAYSFVKTF 379
           PGHGGILDR+DS +F   + Y+F+  F
Sbjct: 233 PGHGGILDRLDSLLFAAPIFYAFLYIF 259

The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108. Length = 259

>gnl|CDD|223648 COG0575, CdsA, CDP-diglyceride synthetase [Lipid metabolism]

 Score =  113 bits (284), Expect = 5e-29
 Identities = 70/266 (26%), Positives = 105/266 (39%), Gaps = 26/266 (9%)

Query: 120 IGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRV 179
           I   + + +F+  +++ GG  F +       +   E +   R   +A      P  +   
Sbjct: 7   ITAIVLLILFLLALLV-GGLYFALLVLLLAILAILEAYRANRFAVLA-----GPLILGLP 60

Query: 180 CSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPC 239
             +    +    L     +  + F    +   +LL       +     +FGL Y      
Sbjct: 61  IDLGLVLLDGRRLLGDGKETLLGFLLGFLLGLVLLGVIYY-LSDSLFKLFGLLY------ 113

Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTA----------FGRTQL-TSISPKKTW 288
             V L   L         G+   +LL     W            FG+ +L   ISPKKTW
Sbjct: 114 VGVGLLALLPFRLGVLYSGLILLLLLFLGV-WAGDIGAYFVGRRFGKHKLAPKISPKKTW 172

Query: 289 EGTIVGLGGCIATTVVLSKIFCWPRY-LPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKD 347
           EG I G  G +   V++  +       + + ++ G L    S  GDL ES IKR  G+KD
Sbjct: 173 EGFIGGALGAVLVAVLVIFLLSSLILNIWTLLILGLLLVLTSQLGDLFESYIKRLLGIKD 232

Query: 348 SGSLIPGHGGILDRVDSYIFTGALAY 373
           SG LIPGHGGILDR DS +F     +
Sbjct: 233 SGWLIPGHGGILDRFDSLLFVAVYLF 258

Length = 265

>gnl|CDD|183240 PRK11624, cdsA, CDP-diglyceride synthase; Provisional

 Score = 93.9 bits (234), Expect = 7e-22
 Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 13/99 (13%)

Query: 273 AFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFL------N 325
            FG+ +L   +SP KTWEG I GL    AT  V+S +F    + P  +    L       
Sbjct: 174 LFGKHKLAPKVSPGKTWEGFIGGL----ATAAVISWLF--GMWAPLDVAPVTLLICSIVA 227

Query: 326 FFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
              SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 228 ALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266

Length = 285

>gnl|CDD|226955 COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]

 Score = 89.0 bits (221), Expect = 5e-20
 Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 7/109 (6%)

Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCW--PRYLPSAIVFGFLNFFGSV 330
           FG+ ++   +SP KT EG I    G I TT++ S I     P     A++ G L      
Sbjct: 197 FGKRKIVPKVSPNKTVEGLI----GGILTTMIASAILGLLTPLNTLQALLAGLLIGLSGF 252

Query: 331 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 379
            GDL  S IKRD GVKDSG L+PGHGGILDRVDS IFT  + + F++  
Sbjct: 253 CGDLVMSAIKRDVGVKDSGKLLPGHGGILDRVDSLIFTAPIFFHFIRYC 301

Length = 303

>gnl|CDD|215322 PLN02594, PLN02594, phosphatidate cytidylyltransferase

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 50/155 (32%), Positives = 61/155 (39%), Gaps = 52/155 (33%)

Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTV---VLSKI---FCW---PR----------- 313
           FGRT L  +SPKKTWEG I   G  + T +    L+ I   F W   PR           
Sbjct: 148 FGRTPLIKLSPKKTWEGFI---GASVTTLISAFYLANIMGKFQWLTCPRKDLSTGWLECD 204

Query: 314 ----------YLPSAIVFGF----------------LNFFGSV---FGDLTESMIKRDAG 344
                      LP  I   F                L  F S+   FG    S  KR   
Sbjct: 205 PDPLFKPETYPLPGWIPRWFPWKEVSVLPVQWHALSLGLFASIIAPFGGFFASGFKRAFK 264

Query: 345 VKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 379
           +KD G  IPGHGGI DR+D  +     AY + ++F
Sbjct: 265 IKDFGDSIPGHGGITDRMDCQMVMAVFAYIYYQSF 299

Length = 342

>gnl|CDD|235207 PRK04032, PRK04032, hypothetical protein; Provisional

 Score = 45.6 bits (109), Expect = 5e-06
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 286 KTWEGTIVGLGGCIATTVVLSKIFCWPRY-LPSAIVFGFLNFFGSVFGDLTESMIKRDAG 344
           KTW G I G+       ++ + +       L  AI+  FL  FG++ GD+  S IKR  G
Sbjct: 37  KTWRGLIGGILFGTLVGLIQNLLVPAYIGALGVAIILAFLLSFGALLGDMLGSFIKRRLG 96

Query: 345 VKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 379
           ++           +LD++D  +     AY     +
Sbjct: 97  LERGAPAP-----LLDQLDFVVGALLFAYLVAPVW 126

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	385
PLN02953	403	phosphatidate cytidylyltransferase	100.0
PRK11624	285	cdsA CDP-diglyceride synthase; Provisional	100.0
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	100.0
COG4589	303	Predicted CDP-diglyceride synthetase/phosphatidate	100.0
COG0575	265	CdsA CDP-diglyceride synthetase [Lipid metabolism]	100.0
KOG1440	432	consensus CDP-diacylglycerol synthase [Lipid trans	100.0
PLN02594	342	phosphatidate cytidylyltransferase	100.0
PRK04032	159	hypothetical protein; Provisional	99.96
PF01864	175	DUF46: Putative integral membrane protein DUF46; I	99.39
KOG4453	269	consensus Predicted ER membrane protein [Function	96.36
COG0170	216	SEC59 Dolichol kinase [Lipid metabolism]	95.79
KOG2468	510	consensus Dolichol kinase [Lipid transport and met	84.83
TIGR01594	107	holin_lambda phage holin, lambda family. This mode	83.04

>PLN02953 phosphatidate cytidylyltransferase

Probab=100.00  E-value=1.6e-93  Score=709.62  Aligned_cols=367  Identities=68%  Similarity=1.084  Sum_probs=301.7

Q ss_pred             CccchhhcccCCccccccccccCCCCCCCCCcceeeccCCCCCccceeeccCCceeeeeccccccchhhHHHHHhhcCCC
Q 016646            1 MASFVEIDRCSHLISLPLTSLNACPCRPSSNKILIFTQKQPPKLNVRIVFNRPKFTLRVRQTGIDTNRRMISAVARAEPD   80 (385)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (385)
                      ||+|+|+        +++||+|||||||+|+|+||+||+|+    +|++-.|+||+||+|+|++|++||++|||||||||
T Consensus         1 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (403)
T PLN02953          1 MASFAEL--------VLSTSRCTCPCRSFSKKPLILPPLSG----LRLVGGDTKPLFRSGLGPISVKRRFLTAVARAESD   68 (403)
T ss_pred             CchHHHH--------HHHhhhccCcCCCCCcCceecCcccc----cccCCCCCccccccCCCchhHHHHHHHHHHHhhhh
Confidence            8999999        99999999999999999999999997    56777799999999999999999999999999999


Q ss_pred             CCCCCcccccccCCCCccccccCCCChhhhhHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016646           81 HLDDGNLKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELV  160 (385)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~Riitalvl~~lv~~i~~~g~~~f~~l~~~i~~lal~E~~~l~  160 (385)
                      |+|||||+||+||+||+|++|+      |+++.+|+++|++||++++++++.+++.|+|+|.+++++++.++++||++|.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~RIiSglvl~~l~l~vV~~GGw~F~~~va~iv~lg~~E~frmv  142 (403)
T PLN02953         69 QLGDDDHAKEIDRIHDLQNVED------KQKKASQLKKRVIFGIGIGLPVGCVVLAGGWFFTVALAASVFIGSREYFELV  142 (403)
T ss_pred             hccCCCccchhhhhcccccccc------cccccccHHHHHHHHHHHHHHHHheeeeCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999977      6777889999999999998888888889999999999999999999999999


Q ss_pred             HhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHhHHHHH
Q 016646          161 RSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCF  240 (385)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~fl~~~~l~~~~~~~~~~~~~~t~~gl~Yi~~~~~~  240 (385)
                      +.++..+...++.......+.+.+..++...++.+.....+....+.++..++.++.+.++.+++.+++|++|+++++++
T Consensus       143 ~~~gi~p~~~~~~~~~~~~g~v~~~~~~v~~~~~g~~~~~l~l~~~~i~~~ll~~~~~~~~~di~~s~fgl~Yig~lpsf  222 (403)
T PLN02953        143 RSRGIAKGMTPPPRYVSRVCSVICALMPILTLYFGNIDILVTSAAFLVAIALLVQRGSPRFAQLSSTMFGLFYCGYLPCF  222 (403)
T ss_pred             HhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHH
Confidence            88877544322333322222222333333222222211111122223333444556556788999999999999999999


Q ss_pred             HHHHhhccccc----------------------ch-----hcccch---------hHHHHhhhHHHHHhhCCcccccCCC
Q 016646          241 WVKLRCGLSAP----------------------AL-----NTGIGV---------SWPILLGGLPHWTAFGRTQLTSISP  284 (385)
Q Consensus       241 li~lr~~~~~~----------------------~~-----~~~~g~---------~w~~~~g~~~vw~~fGKhKL~~ISP  284 (385)
                      |+.+|.....+                      ..     ....|.         +|..|+++|+.++.|||||+++|||
T Consensus       223 ~v~Lr~~~~~~~~~~~~~~~f~~l~~~~~~~~p~~~~~~~~~~~Gl~~~l~~~~~vw~~Di~AY~~G~~fGk~kl~~ISP  302 (403)
T PLN02953        223 WVKLRCGLAAPALNTGKLSPFISLKFSIGKTWPILLGGQAHWTVGLVATLISFSGVIATDTFAFLGGKAFGRTPLTSISP  302 (403)
T ss_pred             HHHHhhccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCC
Confidence            99999411000                      00     001122         4555678889999999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCCCCCCCCCCCcchhhhhhH
Q 016646          285 KKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS  364 (385)
Q Consensus       285 kKTwEG~iGGll~svl~~~l~~~~~~~~~~~~~~illglliav~s~lGDL~ES~iKR~~GVKDSG~iiPGHGGiLDR~DS  364 (385)
                      ||||||++||++++++++.+++.++.|+..+++.+++|++++++||+|||+||++||++||||||+++|||||+|||+||
T Consensus       303 kKTwEG~iGGil~~vlv~~l~~~~l~~~~~~~~~i~lg~li~~~~~~GDL~eS~iKR~~gVKDsG~liPGHGGiLDR~DS  382 (403)
T PLN02953        303 KKTWEGTFVGLVGCIAITILLSKSLSWPQSLFSSIAFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS  382 (403)
T ss_pred             CCeeeeehhHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHhhHHHHHHHhHccCCCCccccCCCCCcchhhHhH
Confidence            99999999999999999988877776666677889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCC
Q 016646          365 YIFTGALAYSFVKTFLPLYGV  385 (385)
Q Consensus       365 lLfaaP~~Y~~~~~~~~~~~~  385 (385)
                      ++|++|++|++++..+|+|||
T Consensus       383 llfaaPv~y~~~~~~~~~~~~  403 (403)
T PLN02953        383 YIFTGALAYSFIKTSLKLYGV  403 (403)
T ss_pred             HHHHHHHHHHHHHHhccccCC
Confidence            999999999999999999997

>PRK11624 cdsA CDP-diglyceride synthase; Provisional

Probab=100.00  E-value=1.1e-53  Score=416.30  Aligned_cols=260  Identities=26%  Similarity=0.329  Sum_probs=174.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHH-HHH
Q 016646          115 QLRKRIGFGLGIGIFVGGVVL-AGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPI-LTL  192 (385)
Q Consensus       115 ~l~~Riitalvl~~lv~~i~~-~g~~~f~~l~~~i~~lal~E~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~i~~-~~~  192 (385)
                      ||++|++||++++++++.+++ .|++.|..++++++++++|||++|.+.++..     ........++........ ...
T Consensus         1 ml~~Riita~vlv~l~l~~i~~~~~~~f~~l~~~~~~l~~~E~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~   75 (285)
T PRK11624          1 MLKYRLITAFILIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWGQLSGFASRS-----QRVWLAVLCGLLLALMLFLLPE   75 (285)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHHHHHHHHH
Confidence            588999999988766665554 4779999999999999999999998765431     111111111111111100 000


Q ss_pred             hhhh--hHH----HHHHHHH-HHHHHHHHhcCC-cc-hhh--hHHHHHHHHHHhHHHHHHHHHhhcc--c----cc-chh
Q 016646          193 YFGQ--IDV----SVTFAAF-VVAMALLLQRGN-PR-FAQ--LSSTIFGLFYCGYLPCFWVKLRCGL--S----AP-ALN  254 (385)
Q Consensus       193 ~~~~--~~~----~~~~~~f-l~~~~l~~~~~~-~~-~~~--~~~t~~gl~Yi~~~~~~li~lr~~~--~----~~-~~~  254 (385)
                      +...  ...    ......+ .+.......+++ .. ..+  ...+.+|.+|++..+...+.+|...  .    .. ...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~G~~~vl  155 (285)
T PRK11624         76 YHHNIHQPLVEISLWASLGWWIVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAWWLL  155 (285)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCHHHHH
Confidence            1000  000    0000111 111111222221 11 112  3356788888665555555666411  0    00 001


Q ss_pred             cccchhHHHHhhhHHHHHhhCCcccc-cCCCCCCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhHHH
Q 016646          255 TGIGVSWPILLGGLPHWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGD  333 (385)
Q Consensus       255 ~~~g~~w~~~~g~~~vw~~fGKhKL~-~ISPkKTwEG~iGGll~svl~~~l~~~~~~~~~~~~~~illglliav~s~lGD  333 (385)
                      .....+|..|.++|++++.||||||+ +|||||||||++||++++++++.+++.+...+.+++++++++++++++||+||
T Consensus       156 ~l~~~vw~sDt~AYf~Gr~fGk~KL~P~ISPkKTwEG~iGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GD  235 (285)
T PRK11624        156 YVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWEGFIGGLATAAVISWLFGMWAPLDVAPVTLLICSIVAALASVLGD  235 (285)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchhhhHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHhH
Confidence            11223577788999999999999996 99999999999999999999998887665433456677899999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHH
Q 016646          334 LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF  379 (385)
Q Consensus       334 L~ES~iKR~~GVKDSG~iiPGHGGiLDR~DSlLfaaP~~Y~~~~~~  379 (385)
                      |+||++||++||||||+++|||||+|||+||++|++|++|++....
T Consensus       236 L~ES~lKR~~gVKDSG~llPGHGGiLDR~DSLlfa~P~~~~~~~~~  281 (285)
T PRK11624        236 LTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLLLLV  281 (285)
T ss_pred             HHHHHHhhccCCCCCcCcCCCcCcchhhHhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999988765543

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=100.00  E-value=4.5e-45  Score=345.02  Aligned_cols=258  Identities=32%  Similarity=0.436  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHhhhh
Q 016646          117 RKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYFGQ  196 (385)
Q Consensus       117 ~~Riitalvl~~lv~~i~~~g~~~f~~l~~~i~~lal~E~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~i~~~~~~~~~  196 (385)
                      |||++|+++++++++..++.+++.+..++.++..++.+|++++.+.++.+..    ... ................+...
T Consensus         1 k~Ri~t~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~   75 (259)
T PF01148_consen    1 KQRIITAIILIPIFILLLFLGPWYFLLLVAVIIFLGFWELFRLFRIKSRSKF----RLI-IRILSWIFFLILFLFFYLRW   75 (259)
T ss_pred             CEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccch----hhH-HHHHHHHHHHHHHHHhhhhH
Confidence            5899999988887888888899999999999999999999999887654321    111 11111111111111111111


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHhHHHHHHHHHhhcccccchhcccchhHHHHhhhHHHHHhhCC
Q 016646          197 IDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGR  276 (385)
Q Consensus       197 ~~~~~~~~~fl~~~~l~~~~~~~~~~~~~~t~~gl~Yi~~~~~~li~lr~~~~~~~~~~~~g~~w~~~~g~~~vw~~fGK  276 (385)
                      .................+...+.+.++...+.++.+|+++..............+.........|.-|..++++++.|||
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~gD~~A~l~G~~fGk  155 (259)
T PF01148_consen   76 LIPYFFATILIIALLLFLVLGERRIRRIISTLFGLIYFGIFLLLLLIFFWFFGPPLALIGILILGIGDSFAYLVGRRFGK  155 (259)
T ss_pred             HHHHHHHHHHHHhhhHHhhhcchHHHHHHHHHHHHHHHhHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            11111111111111222222234456677788888887765522221111111111111112234456678899999999


Q ss_pred             cccccCCCCCCchhhHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCCCCCCCCCCC
Q 016646          277 TQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWP-RYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGH  355 (385)
Q Consensus       277 hKL~~ISPkKTwEG~iGGll~svl~~~l~~~~~~~~-~~~~~~illglliav~s~lGDL~ES~iKR~~GVKDSG~iiPGH  355 (385)
                      |+.+++||||||||++||++++++++.++..+...+ .++++.+++++++++.+++|||+||.+||++||||||+++|||
T Consensus       156 ~~~~~~sp~KT~EGsi~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gdl~~S~~KR~~~iKD~g~lipgh  235 (259)
T PF01148_consen  156 HLAPKISPKKTWEGSIAGFISSFIISFLLLYYLSSFFLSWWQAILISLLASIVEAFGDLFESAIKRDAGIKDSGNLIPGH  235 (259)
T ss_pred             CcCCCCCCCCCHHHHhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCc
Confidence            944589999999999999999999988887766433 5678889999999999999999999999999999999999999


Q ss_pred             cchhhhhhHHHHHHHHHHHHHHHH
Q 016646          356 GGILDRVDSYIFTGALAYSFVKTF  379 (385)
Q Consensus       356 GGiLDR~DSlLfaaP~~Y~~~~~~  379 (385)
                      ||+|||+||+++++|++|+++++|
T Consensus       236 Gg~lDr~d~~l~~~~~~~~~~~~f  259 (259)
T PF01148_consen  236 GGILDRFDSLLFAAPVFYILLKIF  259 (259)
T ss_pred             CCcccchHhHHHHHHHHHHHHHHC
Confidence            999999999999999999998864

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

>COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]

Probab=100.00  E-value=1.2e-44  Score=339.14  Aligned_cols=253  Identities=28%  Similarity=0.419  Sum_probs=190.5

Q ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHH
Q 016646          112 KASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILT  191 (385)
Q Consensus       112 ~~s~l~~Riitalvl~~lv~~i~~~g~~~f~~l~~~i~~lal~E~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~i~~~~  191 (385)
                      +..|++.||.++|++++++..++..|.|....+++++++.+++||.++...+.-+        +...+  .++..+|+++
T Consensus        32 ~~~~l~~RI~aWW~mv~i~~~~~~l~~~~~l~lF~~iSflalrEfltl~ptr~~d--------~~~l~--~~Y~~lplqy  101 (303)
T COG4589          32 KIDELNLRIRAWWVMVIIFSLVISLPRWMTLTLFGLISFLALREFLTLIPTRRPD--------HLALV--WFYWVLPLQY  101 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcccccCC--------ccchh--hhhhhhhHhH
Confidence            4668999999999998888888889999999999999999999999999876421        11222  3456788876


Q ss_pred             Hhh--h---hhHHHHHHHHHHHHHHHHHhcCCc-ch-hhhHHHHHHHHHHhHHHHHHHHHhhcccccchhcccchhHHH-
Q 016646          192 LYF--G---QIDVSVTFAAFVVAMALLLQRGNP-RF-AQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPI-  263 (385)
Q Consensus       192 ~~~--~---~~~~~~~~~~fl~~~~l~~~~~~~-~~-~~~~~t~~gl~Yi~~~~~~li~lr~~~~~~~~~~~~g~~w~~-  263 (385)
                      ++.  +   ....++.++.|+....+....+++ .+ ++.+.-.+|.+-..+..++...+-. ++.+.  ...++..++ 
T Consensus       102 ~~i~i~wy~mf~ifipvY~fL~Lp~l~~L~gdt~gFl~~~s~i~wg~mltvfcish~~~llt-L~~~~--~~~~~ll~if  178 (303)
T COG4589         102 LLIGIDWYEMFIIFIPVYGFLILPILMVLVGDTSGFLHRVSAIQWGWMLTVFCISHAAYLLT-LDITN--FQGGALLVIF  178 (303)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHhHHHHHHHHHHHHHHHhhHHHhh-CCCCC--cCccchHHHH
Confidence            542  2   222334566676665555444443 34 3445556888877777777655443 11111  111221111 


Q ss_pred             --------HhhhHHHHHhhCCcccc-cCCCCCCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhHHHH
Q 016646          264 --------LLGGLPHWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDL  334 (385)
Q Consensus       264 --------~~g~~~vw~~fGKhKL~-~ISPkKTwEG~iGGll~svl~~~l~~~~~~~~~~~~~~illglliav~s~lGDL  334 (385)
                              ++.-|..+..|||||.. ++||||||||++||++.+++++.+++++  .|.++.++++.|++++..|.+||+
T Consensus       179 lli~~q~nDV~QYvwGk~fGk~Ki~P~vSPnKTveGl~GGilt~~~~~~~l~~l--Tp~~~lqa~~~~~~I~l~GF~Gdl  256 (303)
T COG4589         179 LLILTELNDVAQYVWGKSFGKRKIVPKVSPNKTVEGLIGGILTTMIASAILGLL--TPLNTLQALLAGLLIGLSGFCGDL  256 (303)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCcccCCCcCCcchHHHHhhhHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHHhhhHH
Confidence                    12234444599999995 9999999999999999999998888733  377899999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHH
Q 016646          335 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF  379 (385)
Q Consensus       335 ~ES~iKR~~GVKDSG~iiPGHGGiLDR~DSlLfaaP~~Y~~~~~~  379 (385)
                      +.|++||+.||||||+++|||||+|||+||++|+||+++++.+++
T Consensus       257 vmSaiKRd~gvKD~G~li~GHGGiLDR~DSL~FtAPiffh~~ry~  301 (303)
T COG4589         257 VMSAIKRDVGVKDSGKLLPGHGGILDRVDSLIFTAPIFFHFIRYC  301 (303)
T ss_pred             HHHHHHhhcCCCcccccCCCCccHHHHHHHHHHhhhHHHHHHHHh
Confidence            999999999999999999999999999999999999999999875

>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]

Probab=100.00  E-value=7.6e-44  Score=343.87  Aligned_cols=255  Identities=29%  Similarity=0.382  Sum_probs=167.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHhh
Q 016646          115 QLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTLYF  194 (385)
Q Consensus       115 ~l~~Riitalvl~~lv~~i~~~g~~~f~~l~~~i~~lal~E~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~i~~~~~~~  194 (385)
                      |+++|++++.++...+....+.+++.|.++..++++.+.||++++.+.+....     ......... .....+......
T Consensus         1 ~~~~r~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~   74 (265)
T COG0575           1 MLKQRVITAIVLLILFLLALLVGGLYFALLVLLLAILAILEAYRANRFAVLAG-----PLILGLPID-LGLVLLDGRRLL   74 (265)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccch-----hHHHHHHHH-HHHHHHHHHHHh
Confidence            47899999987765554444445999999999999999999999998765431     111111111 011111100001


Q ss_pred             hhh--HHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHhHHHHHHHHHhhccc---ccchhcccchhHHHHhhhHH
Q 016646          195 GQI--DVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLS---APALNTGIGVSWPILLGGLP  269 (385)
Q Consensus       195 ~~~--~~~~~~~~fl~~~~l~~~~~~~~~~~~~~t~~gl~Yi~~~~~~li~lr~~~~---~~~~~~~~g~~w~~~~g~~~  269 (385)
                      ...  ........+..... . ........+......+..|.++.+......+....   ..........+|..|.++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~l~~~vw~~Di~Ayf  152 (265)
T COG0575          75 GDGKETLLGFLLGFLLGLV-L-LGVIYYLSDSLFKLFGLLYVGVGLLALLPFRLGVLYSGLILLLLLFLGVWAGDIGAYF  152 (265)
T ss_pred             hhHHHHHHHHHHHHHHHHH-H-HHhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhHHH
Confidence            111  11111111111101 1 11111223334455667777665444443332110   00000112346778889999


Q ss_pred             HHHhhCCcccc-cCCCCCCchhhHHHHHHHHHHHHHHHHHhc-cCcchHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCCC
Q 016646          270 HWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFC-WPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKD  347 (385)
Q Consensus       270 vw~~fGKhKL~-~ISPkKTwEG~iGGll~svl~~~l~~~~~~-~~~~~~~~illglliav~s~lGDL~ES~iKR~~GVKD  347 (385)
                      +++.|||||++ ++||||||||++||.+++++++........ .+.+++..+++++++++++|+|||+||++||++||||
T Consensus       153 ~Gr~fGk~kl~p~iSP~KT~eGfigG~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~lGDL~eS~iKR~~gvKD  232 (265)
T COG0575         153 VGRRFGKHKLAPKISPKKTWEGFIGGALGAVLVAVLVIFLLSSLILNIWTLLILGLLLVLTSQLGDLFESYIKRLLGIKD  232 (265)
T ss_pred             HHHHcCCCCCCCcCCCCCchHHhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHccCCCC
Confidence            99999999986 899999999999999999998888776654 3445677789999999999999999999999999999


Q ss_pred             CCCCCCCCcchhhhhhHHHHHHHHHHHHHHHH
Q 016646          348 SGSLIPGHGGILDRVDSYIFTGALAYSFVKTF  379 (385)
Q Consensus       348 SG~iiPGHGGiLDR~DSlLfaaP~~Y~~~~~~  379 (385)
                      ||+++|||||+|||+||++++  ++|++...+
T Consensus       233 sg~liPGHGGilDR~Dsl~~~--~~~~~~~~~  262 (265)
T COG0575         233 SGWLIPGHGGILDRFDSLLFV--AVYLFLLLF  262 (265)
T ss_pred             cCCCCCCcCcccccHhhHHHH--HHHHHHHHH
Confidence            999999999999999999998  666655543

>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism]

Probab=100.00  E-value=7.2e-42  Score=339.84  Aligned_cols=317  Identities=27%  Similarity=0.254  Sum_probs=218.1

Q ss_pred             CCCcceeeccCCCCCccceeeccCCceeee-eccccccchhhHHHHHhhcCCCCCCCCcccccccCCCC-ccccccCCCC
Q 016646           29 SSNKILIFTQKQPPKLNVRIVFNRPKFTLR-VRQTGIDTNRRMISAVARAEPDHLDDGNLKEGIDNGHK-LVVSEKSVSD  106 (385)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  106 (385)
                      ..+|  +.++.|+    -|. |.+-||+++ .|..|++..||.+++++++|.+++++++++++++.++. +|++++...=
T Consensus        35 ~~~~--~~~~~s~----~~~-p~~~~~~l~~~~~~~~n~~~R~i~t~~mi~~f~~i~~~g~~~~~~lv~~iQi~~~~Eii  107 (432)
T KOG1440|consen   35 RTRK--IRPPVSK----DRT-PVRLKPLLSALRSRWKNFFRRGILTLAMISGFFLIIYMGHKYLMALVLVIQIKCFKEII  107 (432)
T ss_pred             cccc--cCCCCCC----CCC-cccchhhhhhCCCCceeeehHHHHHHHHHhccEEEEecCcchhhhhhhhHHHHHHHHHH
Confidence            4455  5555553    233 456688884 88999999999999999999999999999999999966 8887663221


Q ss_pred             hhhhhHHHhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHH
Q 016646          107 SGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAF  186 (385)
Q Consensus       107 ~~~~~~~s~l~~Riitalvl~~lv~~i~~~g~~~f~~l~~~i~~lal~E~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~  186 (385)
                      + .+++.++.++|..+..+....+..+.+.+++-+..-.+...+..-.|++++++-.+    ...+..|+..++...+.+
T Consensus       108 ~-i~~~~~~~k~lp~f~~l~w~fl~t~~yf~yg~~~~~yf~~v~~~~~~l~~LV~yh~----fi~f~lYi~gf~~FV~sL  182 (432)
T KOG1440|consen  108 A-IGRKVSREKDLPWFRLLNWYFLLTVNYFVYGEILVAYFAAVFIRDRFLFFLVRYHR----FICFALYLIGFVSFVLSL  182 (432)
T ss_pred             H-HhhccccccCCceeehhhhHHHHHHHHHHhHHHHHHHHHHHHhhhHHHHHHHHhcc----cccHHHHHHHHHHHHHHh
Confidence            1 23445566777777765554555566666777766667777788899999988433    334555554443333333


Q ss_pred             HH-HHHHhhhhhHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHhHHHHHHHHHhhcccccchhcccchhHHHHh
Q 016646          187 MP-ILTLYFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILL  265 (385)
Q Consensus       187 i~-~~~~~~~~~~~~~~~~~fl~~~~l~~~~~~~~~~~~~~t~~gl~Yi~~~~~~li~lr~~~~~~~~~~~~g~~w~~~~  265 (385)
                      .+ .+..+++.+++.-..+++++....+..++..+......+.++++||.                            ++
T Consensus       183 ~k~~yk~QFg~fawtH~sll~Vv~qs~l~i~N~feG~fWFl~P~~lvicn----------------------------Di  234 (432)
T KOG1440|consen  183 RKGIYKLQFGLFAWTHMSLLLVVTQSHLVIQNLFEGLFWFLVPAGLVICN----------------------------DI  234 (432)
T ss_pred             hhhhhHHHHHhHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHhHhheeC----------------------------ch
Confidence            33 22233444443323333333333333333222211111122222211                            22


Q ss_pred             hhHHHHHhhCCcccccCCCCCCchhhHHHHHHHHHHHHHHHHHhc---c-----------------C-------------
Q 016646          266 GGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFC---W-----------------P-------------  312 (385)
Q Consensus       266 g~~~vw~~fGKhKL~~ISPkKTwEG~iGGll~svl~~~l~~~~~~---~-----------------~-------------  312 (385)
                      .+|.++..|||+||-++||||||||++||.++.++.+++++..+.   +                 |             
T Consensus       235 ~AY~~Gf~fGktPLiklSPKKTwEGFiGg~~~tvv~~i~~s~vL~~~~~~~cp~~d~~t~~~~~c~p~~~F~~~~y~lp~  314 (432)
T KOG1440|consen  235 FAYLFGFFFGKTPLIKLSPKKTWEGFIGGTFGTVVFGILFSYVLGHYTFFTCPVKDFSTTPLLSCEPKPLFEPQTYGLPG  314 (432)
T ss_pred             HHHHHhhhhcCCcccccCCCCccchhhchhHHHHHHHHHHHHHhccCeEEEecccccCCCCccccCcccccCcceecCCc
Confidence            344455589999999999999999999998888888877765421   0                 0             


Q ss_pred             -----c---------chHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Q 016646          313 -----R---------YLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKT  378 (385)
Q Consensus       313 -----~---------~~~~~illglliav~s~lGDL~ES~iKR~~GVKDSG~iiPGHGGiLDR~DSlLfaaP~~Y~~~~~  378 (385)
                           .         ..++.+.+|...++.|.+||++||++||+++|||+|+.||||||++||+|+.++.+-++|.|.+.
T Consensus       315 ~i~~~i~~k~is~~p~~~Hsial~~faS~iaPFGGFfASgfKRafKiKDFG~~IPGHGGI~DR~DCQ~lma~Fay~Yi~S  394 (432)
T KOG1440|consen  315 VISITIRLKSISLPPFQFHSIALGLFASFIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQILMATFAYVYIQS  394 (432)
T ss_pred             eeeeeccccccccchHHHHHHHHHHHHHhhccchhHHHHHhHHhhcCCcccccCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence                 0         13567899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCC
Q 016646          379 FLPLYGV  385 (385)
Q Consensus       379 ~~~~~~~  385 (385)
                      ++..+++
T Consensus       395 FI~~~~~  401 (432)
T KOG1440|consen  395 FIRLPGV  401 (432)
T ss_pred             HhccCCH
Confidence            9877664

>PLN02594 phosphatidate cytidylyltransferase

Probab=100.00  E-value=8.6e-40  Score=322.27  Aligned_cols=161  Identities=29%  Similarity=0.368  Sum_probs=130.6

Q ss_pred             chhhhHHHHHHHHHHhHHHHHHHHHhhcccccchhcccchhHHHHhhhHHHHHhhCCcccccCCCCCCchhhHHHHHHHH
Q 016646          220 RFAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCI  299 (385)
Q Consensus       220 ~~~~~~~t~~gl~Yi~~~~~~li~lr~~~~~~~~~~~~g~~w~~~~g~~~vw~~fGKhKL~~ISPkKTwEG~iGGll~sv  299 (385)
                      .+.+.+.+.++++|+++..++++. ...............+|..|+++|+.++.||||||.++||||||||++||+++++
T Consensus        95 qf~~~a~t~~~llyV~~~~~~ii~-ni~~G~~w~~l~~~lV~~nDi~AY~~G~~fGk~kL~~iSPkKTwEGfiGg~i~T~  173 (342)
T PLN02594         95 QFGQYAWTHMILIVVFTQSSFTVA-NIFEGIFWFLLPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFIGASVTTL  173 (342)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHH-HccccHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCCccCCCCchhhhHHHHHHHH
Confidence            578899999999999987777652 1100000000111235666778899999999999999999999999999999999


Q ss_pred             HHHHHHHHHhc---c---C------------------------------------cc----hHHHHHHHHHHHHHHhHHH
Q 016646          300 ATTVVLSKIFC---W---P------------------------------------RY----LPSAIVFGFLNFFGSVFGD  333 (385)
Q Consensus       300 l~~~l~~~~~~---~---~------------------------------------~~----~~~~illglliav~s~lGD  333 (385)
                      +++.+++.++.   +   |                                    .+    .++++++|++++++||+||
T Consensus       174 i~~~~~~~~~~~~~~~~cp~~~~~~~~~~C~p~~~f~~~~~~~p~~~~~~~~~~~i~~~~~~~h~l~l~l~aSl~a~fGd  253 (342)
T PLN02594        174 ISAFYLANIMGKFQWLTCPRKDLSTGWLECDPDPLFKPETYPLPGWIPRWFPWKEVSVLPVQWHALSLGLFASIIAPFGG  253 (342)
T ss_pred             HHHHHHHHHhcccccccCCccccccCcccCCCccccccccccCCccccccccccccccchHHHHHHHHHHHHHHHHHhhh
Confidence            99998876531   0   0                                    01    4678999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHhh
Q 016646          334 LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLP  381 (385)
Q Consensus       334 L~ES~iKR~~GVKDSG~iiPGHGGiLDR~DSlLfaaP~~Y~~~~~~~~  381 (385)
                      ++||++||++||||||+++|||||+|||+||+++++|++|++...++.
T Consensus       254 lfaS~~KR~~~IKDfG~~IPGHGGilDRfDs~l~~~~f~y~y~~~fi~  301 (342)
T PLN02594        254 FFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYYQSFIV  301 (342)
T ss_pred             HHHHHHHHccCCCcccCccCCCccccccccHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999988888763

>PRK04032 hypothetical protein; Provisional

Probab=99.96  E-value=2e-29  Score=225.29  Aligned_cols=92  Identities=29%  Similarity=0.427  Sum_probs=82.2

Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCCCCCCCCCCCcchhh
Q 016646          282 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWP-RYLPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILD  360 (385)
Q Consensus       282 ISPkKTwEG~iGGll~svl~~~l~~~~~~~~-~~~~~~illglliav~s~lGDL~ES~iKR~~GVKDSG~iiPGHGGiLD  360 (385)
                      +||||||||++||++++++++.+++.+...+ .++.+.+++|++++++||+|||+||++||++|||| |+++|    +||
T Consensus        33 iSP~KTwEG~iGGv~~~~l~~~~~~~~~~~~~~~~~~~~~~g~li~v~~~~GDL~eS~iKR~~gVKD-g~~iP----iLD  107 (159)
T PRK04032         33 LGDGKTWRGLIGGILFGTLVGLIQNLLVPAYIGALGVAIILAFLLSFGALLGDMLGSFIKRRLGLER-GAPAP----LLD  107 (159)
T ss_pred             CCCCCcHHHhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCCC-cCccc----chh
Confidence            9999999999999999999998887665432 23566889999999999999999999999999999 88888    999


Q ss_pred             hhhHHHHHHHHHHHHHHH
Q 016646          361 RVDSYIFTGALAYSFVKT  378 (385)
Q Consensus       361 R~DSlLfaaP~~Y~~~~~  378 (385)
                      |+||++|++|++|++...
T Consensus       108 RiDsll~a~p~~~l~~~l  125 (159)
T PRK04032        108 QLDFVVGALLFAYLVAPV  125 (159)
T ss_pred             hhHHHHHHHHHHHHHHhh
Confidence            999999999999987654

>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function

Probab=99.39  E-value=1.8e-12  Score=118.42  Aligned_cols=99  Identities=29%  Similarity=0.441  Sum_probs=77.9

Q ss_pred             hhCCcccc--c-CCCCCCchhhHHHHHHHHHHHHHHHHHhc-------cCcchHHHHHHHHHHHHHHhHHHHHHHHHhhc
Q 016646          273 AFGRTQLT--S-ISPKKTWEGTIVGLGGCIATTVVLSKIFC-------WPRYLPSAIVFGFLNFFGSVFGDLTESMIKRD  342 (385)
Q Consensus       273 ~fGKhKL~--~-ISPkKTwEG~iGGll~svl~~~l~~~~~~-------~~~~~~~~illglliav~s~lGDL~ES~iKR~  342 (385)
                      -+||+--.  + .-.||||||+++|++++++++.+.+....       ...+..+.+..|++.++.+.+||+.-|.+||+
T Consensus        32 D~G~~~~DGrRilGdgKTwrG~i~gvl~g~l~g~i~~~l~~~~~~~~~~~~~~~~~~~~g~ll~~gamlGDl~~SFIKRR  111 (175)
T PF01864_consen   32 DFGKTFRDGRRILGDGKTWRGFIGGVLAGTLVGIIQGLLLPLSIFALYFYGSLFFNLLLGFLLGLGAMLGDLPGSFIKRR  111 (175)
T ss_pred             cCCCccCCCCEecCCCCeEEeeeHHHHHHHHHHHHHHHHhhhcccccccccchHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence            44454333  3 78999999999999999999988766522       12234566788999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchhhhhhHHHHHHHHHHHHH
Q 016646          343 AGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFV  376 (385)
Q Consensus       343 ~GVKDSG~iiPGHGGiLDR~DSlLfaaP~~Y~~~  376 (385)
                      .|++.+.. .|    ++|++|+++.+..+.|.+.
T Consensus       112 lgi~~G~~-ap----~lDQldf~lgall~~~~~~  140 (175)
T PF01864_consen  112 LGIPRGAP-AP----GLDQLDFVLGALLLLYLFA  140 (175)
T ss_pred             cCCCCCCc-Cc----cchhHHHHHHHHHHHHHHH
Confidence            99996554 45    5999999999987776644

It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.

>KOG4453 consensus Predicted ER membrane protein [Function unknown]

Probab=96.36  E-value=0.013  Score=55.83  Aligned_cols=74  Identities=16%  Similarity=0.020  Sum_probs=50.8

Q ss_pred             HhhhHHHHHhhCCcccccCCCCCCchhhHHHHHHHHHHHHHHHHHhc-cCcchHH--H-HHHHHHHHHHHhHHHHHHHH
Q 016646          264 LLGGLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFC-WPRYLPS--A-IVFGFLNFFGSVFGDLTESM  338 (385)
Q Consensus       264 ~~g~~~vw~~fGKhKL~~ISPkKTwEG~iGGll~svl~~~l~~~~~~-~~~~~~~--~-illglliav~s~lGDL~ES~  338 (385)
                      +..+-.++++||+.|.+ +.|||+|.|.||...+++...+++..++. ......+  + .-+-....+.|+++-++||+
T Consensus       169 Dt~AdtvGRKfG~~tpk-~aknKSlAGSIgaft~Gvf~c~vy~gyf~s~g~~~l~~s~r~~~~~l~l~~g~vaAlvEsl  246 (269)
T KOG4453|consen  169 DTIADTVGRKFGSTTPK-YAKNKSLAGSIGAFTFGVFICIVYLGYFSSLGPDYLHMSWRETTLQLVLMVGMVAALVESL  246 (269)
T ss_pred             hhHHHHHhhhccccCCC-cCCCccccchHHHHHHHHHHHHHHHHHHhccCcchhccccccchHHHHHHHHHHHHHHhcC
Confidence            44455677899998865 88999999999999999999888766653 1101111  1 11112345667788999986

>COG0170 SEC59 Dolichol kinase [Lipid metabolism]

Probab=95.79  E-value=0.019  Score=54.48  Aligned_cols=41  Identities=17%  Similarity=0.160  Sum_probs=32.4

Q ss_pred             hHHHHHhhCCcccccCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016646          267 GLPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI  308 (385)
Q Consensus       267 ~~~vw~~fGKhKL~~ISPkKTwEG~iGGll~svl~~~l~~~~  308 (385)
                      +-+++..+||||. ..++||||||++++++++.++..++..+
T Consensus       130 AsiiG~~~G~~~~-~~~~~KSleGSla~fi~~~l~~~~~~~~  170 (216)
T COG0170         130 ASIIGKRYGRHKR-ILGNGKSLEGSLAFFIASFLVLLVLYGY  170 (216)
T ss_pred             HHHhCcccCcccc-ccCCCCchhhhHHHHHHHHHHHHHHHHH
Confidence            3456679999943 5999999999999999998887655433

>KOG2468 consensus Dolichol kinase [Lipid transport and metabolism]

Probab=84.83  E-value=2.3  Score=44.60  Aligned_cols=37  Identities=24%  Similarity=0.275  Sum_probs=29.6

Q ss_pred             HHHHHhhCCcccccCCCCCCchhhHHHHHHHHHHHHHHH
Q 016646          268 LPHWTAFGRTQLTSISPKKTWEGTIVGLGGCIATTVVLS  306 (385)
Q Consensus       268 ~~vw~~fGKhKL~~ISPkKTwEG~iGGll~svl~~~l~~  306 (385)
                      .+++.++||+|.++-  |||.||.+.+++...++..+.-
T Consensus       427 SiiG~r~G~~RW~~T--kKTlEGT~Afivs~~iv~~ll~  463 (510)
T KOG2468|consen  427 SIIGKRYGRIRWSGT--KKTLEGTLAFIVSSFIVCLLLL  463 (510)
T ss_pred             HHHhhhhcceecCCC--cceeehhhHHHHHHHHHHHHHH
Confidence            456669999998854  9999999999998887765553

>TIGR01594 holin_lambda phage holin, lambda family

Probab=83.04  E-value=3.5  Score=35.08  Aligned_cols=58  Identities=19%  Similarity=0.284  Sum_probs=37.4

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHH--hHHHHHHHHHhhcCCCCC
Q 016646          286 KTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGS--VFGDLTESMIKRDAGVKD  347 (385)
Q Consensus       286 KTwEG~iGGll~svl~~~l~~~~~~~~~~~~~~illglliav~s--~lGDL~ES~iKR~~GVKD  347 (385)
                      ...||++.|+++-.+.. .+. ++++|.  ....++|..+++.|  .++++..+.+.|+.|++|
T Consensus        48 ~llea~mCg~la~~~~~-~l~-~~g~~~--~~a~~~g~~IGflGvd~ir~~~~~~i~kK~g~~~  107 (107)
T TIGR01594        48 KLIDALMCAAIALVAAS-ALD-FLGLPT--SLSPFLGGMIGFVGVDKIREFAKRFINKKAGVDD  107 (107)
T ss_pred             HHHHHHHHHHHHHHHHH-HHH-HcCCcH--HHHHHHhhheeeccHHHHHHHHHHHHHhhcCCCC
Confidence            34588777766633322 222 233332  23345667777666  499999999999999998

This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00