Citrus Sinensis ID: 016781

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI
ccccccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHccccEEEccccccccccEEEEEccc
ccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcHcccccccccccHccHHHHHHHHHHHcccccEEEccccccccccccccccccccccHHHHHHHHHHccccHHHEEEEEEHHHHccHHEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHcHHHHHHccccccHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccEEEEccccccccEEEEEEccc
mgaggrmavpstpmkvdsdplkrvpcskppftlsqvkkaipphcfersvlRSFSYVVHDLTIAFVFYYIADTyihqlphplsylaWPVYWALQGCILTGVWVVAhecghhafsdyqwlDDTVGLILHSCLlvpyfswkyshrrhhsntgsldrdevfvpkqkTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFnvsgrpydrfachfdpygpiysdrerlQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQhthpslphyhssewdWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPIlgeyyqfdgtpFYKAMWREAKeclyvepdegdqnkgvfwyrnki
mgaggrmavpstpmkvdsdplkrVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHhsntgsldrdevfVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKEClyvepdegdqnkgvfwyrnki
MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI
********************************LSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWY****
****************************PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI
*******************PLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI
************************PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNK*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query383 2.2.26 [Sep-21-2011]
P48631383 Omega-6 fatty acid desatu yes no 1.0 1.0 0.804 0.0
P46313383 Omega-6 fatty acid desatu yes no 1.0 1.0 0.762 1e-180
Q39287384 Omega-6 fatty acid desatu N/A no 1.0 0.997 0.763 1e-178
P48630387 Omega-6 fatty acid desatu no no 0.986 0.976 0.735 1e-172
O81931375 Delta(12) fatty acid dehy N/A no 0.976 0.997 0.590 1e-137
P59668400 Delta(12) fatty acid desa N/A no 0.942 0.902 0.448 1e-85
Q9Y8H5400 Delta(12) fatty acid desa N/A no 0.890 0.852 0.468 1e-85
P48626379 Omega-3 fatty acid desatu N/A no 0.853 0.862 0.388 1e-59
P48623386 Omega-3 fatty acid desatu no no 0.843 0.836 0.389 3e-56
P48618404 Omega-3 fatty acid desatu N/A no 0.830 0.787 0.367 8e-54
>sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1 Back     alignment and function desciption
 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/383 (80%), Positives = 338/383 (88%)

Query: 1   MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDL 60
           MGAGGR  VP    K + DPLKRVP  KP F+LSQ+KKAIPPHCF+RSVLRSFSYVV+DL
Sbjct: 1   MGAGGRTDVPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDL 60

Query: 61  TIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDD 120
           TIAF  YY+A  Y H LP PLS+    +YWA+QGCILTGVWV+AHECGHHAFSDYQ LDD
Sbjct: 61  TIAFCLYYVATHYFHLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDD 120

Query: 121 TVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVI 180
            VGLILHS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+ I WY+KYLNNP GRV+
Sbjct: 121 IVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVL 180

Query: 181 TLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLY 240
           TL VTLTLGWPLYLA NVSGRPYDRFACH+DPYGPIYSDRERLQI+ISDAG+LA++Y L+
Sbjct: 181 TLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLF 240

Query: 241 CLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRD 300
            L  AKGL +V C+YG PLLVVNGFLVLIT LQHTHP+LPHY SSEWDW RGALATVDRD
Sbjct: 241 RLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDWLRGALATVDRD 300

Query: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 360
           YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYY+FD TPF KAMWREA+
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREAR 360

Query: 361 ECLYVEPDEGDQNKGVFWYRNKI 383
           EC+YVEPD+  ++KGVFWY NK+
Sbjct: 361 ECIYVEPDQSTESKGVFWYNNKL 383
ER (microsomal) omega-6 fatty acid desaturase introduces the second double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.
Glycine max (taxid: 3847)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 9EC: .EC: -
>sp|P46313|FAD6E_ARATH Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1 Back     alignment and function description
>sp|Q39287|FAD6E_BRAJU Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1 Back     alignment and function description
>sp|P48630|FD6E1_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1 Back     alignment and function description
>sp|O81931|FAD12_CREAL Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2 Back     alignment and function description
>sp|P59668|FAD12_MORIS Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1 Back     alignment and function description
>sp|Q9Y8H5|FAD12_MORAP Delta(12) fatty acid desaturase OS=Mortierella alpina PE=1 SV=2 Back     alignment and function description
>sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1 Back     alignment and function description
>sp|P48623|FAD3E_ARATH Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1 Back     alignment and function description
>sp|P48618|FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
68164987383 omega-6 fatty acid desaturase [Hevea bra 0.997 0.997 0.824 0.0
356572094383 PREDICTED: omega-6 fatty acid desaturase 1.0 1.0 0.825 0.0
255579731383 omega-6 desaturase, endoplasmic reticulu 0.997 0.997 0.816 0.0
255645582383 unknown [Glycine max] 1.0 1.0 0.822 0.0
388493780384 unknown [Lotus japonicus] 1.0 0.997 0.812 0.0
194346322382 omega-6 desaturase [Linum usitatissimum] 0.997 1.0 0.814 0.0
76257461383 delta12-fatty acid desaturase [Jatropha 0.997 0.997 0.806 0.0
284794949383 delta-12-fatty acid desaturase [Jatropha 0.997 0.997 0.806 0.0
363980957383 fatty acid desaturase 2 [Jatropha curcas 0.997 0.997 0.803 0.0
145280641383 oleate desaturase [Caragana korshinskii] 0.997 0.997 0.814 0.0
>gi|68164987|gb|AAY87459.1| omega-6 fatty acid desaturase [Hevea brasiliensis] Back     alignment and taxonomy information
 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/382 (82%), Positives = 350/382 (91%)

Query: 1   MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDL 60
           MGAGGRM+VP +P +++SD LKRVP SKPPFTL Q+KKAIPPHCFERSVLRSFSYV+ DL
Sbjct: 1   MGAGGRMSVPPSPKQLESDVLKRVPYSKPPFTLGQIKKAIPPHCFERSVLRSFSYVIQDL 60

Query: 61  TIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDD 120
           TIA +FYYIA  Y H LP PLSY+AWP+YW+LQGC+LTGVWV+AHECGHHAFSDYQWLDD
Sbjct: 61  TIASIFYYIATNYFHLLPQPLSYVAWPIYWSLQGCVLTGVWVIAHECGHHAFSDYQWLDD 120

Query: 121 TVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVI 180
           TVGLILHSCLLVPYFSWK+SHRRHHSNT SL+RDEVFVPK+K+ I W +KYLNNPLGRV+
Sbjct: 121 TVGLILHSCLLVPYFSWKHSHRRHHSNTASLERDEVFVPKKKSNIRWLSKYLNNPLGRVL 180

Query: 181 TLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLY 240
           TL +TLTLGWPLYLAFNVSGRPY+RFACH+DPYGPIY+DRER +I ISDAG+LA+ Y LY
Sbjct: 181 TLIITLTLGWPLYLAFNVSGRPYNRFACHYDPYGPIYTDRERTEICISDAGVLAVTYGLY 240

Query: 241 CLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRD 300
            L  AKGL +V C+YG PLLVVN FLV+IT LQHTHPSLPHY SSEWDW RGALATVDRD
Sbjct: 241 SLAVAKGLAWVVCVYGVPLLVVNAFLVMITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 300

Query: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 360
           YGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILGEYYQFDGTPFYKAMWREAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 360

Query: 361 ECLYVEPDEGDQNKGVFWYRNK 382
           EC+YVEPD+ DQ+KGV+WY+NK
Sbjct: 361 ECVYVEPDDRDQSKGVYWYKNK 382

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356572094|ref|XP_003554205.1| PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like [Glycine max] Back     alignment and taxonomy information
>gi|255579731|ref|XP_002530704.1| omega-6 desaturase, endoplasmic reticulum [Ricinus communis] gi|117957296|gb|ABK59093.1| oleate desaturase [Ricinus communis] gi|223529718|gb|EEF31658.1| omega-6 desaturase, endoplasmic reticulum [Ricinus communis] Back     alignment and taxonomy information
>gi|255645582|gb|ACU23285.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388493780|gb|AFK34956.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|194346322|gb|ACF49507.1| omega-6 desaturase [Linum usitatissimum] Back     alignment and taxonomy information
>gi|76257461|gb|ABA41034.1| delta12-fatty acid desaturase [Jatropha curcas] Back     alignment and taxonomy information
>gi|284794949|gb|ADB93805.1| delta-12-fatty acid desaturase [Jatropha curcas] Back     alignment and taxonomy information
>gi|363980957|gb|AEW43690.1| fatty acid desaturase 2 [Jatropha curcas] Back     alignment and taxonomy information
>gi|145280641|gb|ABP49577.1| oleate desaturase [Caragana korshinskii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query383
TAIR|locus:2099297383 FAD2 "fatty acid desaturase 2" 0.997 0.997 0.768 1.4e-172
UNIPROTKB|Q41131387 Q41131 "Oleate 12-hydroxylase" 0.997 0.987 0.712 9.6e-160
ASPGD|ASPL0000055218471 odeA [Emericella nidulans (tax 0.449 0.365 0.456 6.6e-79
CGD|CAL0003001436 FAD2 [Candida albicans (taxid: 0.908 0.798 0.431 9e-77
UNIPROTKB|Q59WT3436 FAD2 "Likely delta-12 fatty ac 0.908 0.798 0.431 9e-77
ASPGD|ASPL0000066189394 an2 [Emericella nidulans (taxi 0.420 0.408 0.460 2.5e-75
CGD|CAL0006277433 FAD3 [Candida albicans (taxid: 0.919 0.812 0.391 6.7e-72
UNIPROTKB|Q5AL44433 FAD3 "Likely delta-12 fatty ac 0.919 0.812 0.391 6.7e-72
UNIPROTKB|Q9Y8H5400 Q9Y8H5 "Delta(12) fatty acid d 0.712 0.682 0.446 2.6e-63
TAIR|locus:2005508386 FAD3 "fatty acid desaturase 3" 0.793 0.787 0.413 6.2e-62
TAIR|locus:2099297 FAD2 "fatty acid desaturase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1677 (595.4 bits), Expect = 1.4e-172, P = 1.4e-172
 Identities = 295/384 (76%), Positives = 334/384 (86%)

Query:     1 MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDL 60
             MGAGGRM VP++  K ++D  KRVPC KPPF++  +KKAIPPHCF+RS+ RSFSY++ D+
Sbjct:     1 MGAGGRMPVPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDI 60

Query:    61 TIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDD 120
              IA  FYY+A  Y   LP PLSYLAWP+YWA QGC+LTG+WV+AHECGHHAFSDYQWLDD
Sbjct:    61 IIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDD 120

Query:   121 TVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVI 180
             TVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+AI WY KYLNNPLGR++
Sbjct:   121 TVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIM 180

Query:   181 TLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLY 240
              LTV   LGWPLYLAFNVSGRPYD FACHF P  PIY+DRERLQI++SDAGILA+ + LY
Sbjct:   181 MLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLY 240

Query:   241 CLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRD 300
                AA+G+  + C+YG PLL+VN FLVLIT LQHTHPSLPHY SSEWDW RGALATVDRD
Sbjct:   241 RYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRD 300

Query:   301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 360
             YGILNKVFHNITDTHVAHHLFSTMPHY+AMEATKAIKPILG+YYQFDGTP+Y AM+REAK
Sbjct:   301 YGILNKVFHNITDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAK 360

Query:   361 ECLYVEPD-EGDQNKGVFWYRNKI 383
             EC+YVEPD EGD+ KGV+WY NK+
Sbjct:   361 ECIYVEPDREGDK-KGVYWYNNKL 383
GO:0005634 "nucleus" evidence=ISM
GO:0005783 "endoplasmic reticulum" evidence=NAS
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0016720 "delta12-fatty acid dehydrogenase activity" evidence=IGI
GO:0045485 "omega-6 fatty acid desaturase activity" evidence=IDA
UNIPROTKB|Q41131 Q41131 "Oleate 12-hydroxylase" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
ASPGD|ASPL0000055218 odeA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003001 FAD2 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59WT3 FAD2 "Likely delta-12 fatty acid desaturase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000066189 an2 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0006277 FAD3 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5AL44 FAD3 "Likely delta-12 fatty acid desaturase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y8H5 Q9Y8H5 "Delta(12) fatty acid desaturase" [Mortierella alpina (taxid:64518)] Back     alignment and assigned GO terms
TAIR|locus:2005508 FAD3 "fatty acid desaturase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P46313FAD6E_ARATH1, ., 1, 4, ., 1, 9, ., -0.76241.01.0yesno
Q39287FAD6E_BRAJU1, ., 1, 4, ., 1, 9, ., -0.76301.00.9973N/Ano
O81931FAD12_CREAL1, ., 1, 4, ., 9, 9, ., 3, 30.59050.97650.9973N/Ano
P48631FD6E2_SOYBN1, ., 1, 4, ., 1, 9, ., -0.80411.01.0yesno
P48630FD6E1_SOYBN1, ., 1, 4, ., 1, 9, ., -0.73560.98690.9767nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.190.691
4th Layer1.14.19.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00061217
omega-6 fatty acid desaturase (388 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query383
PLN02505381 PLN02505, PLN02505, omega-6 fatty acid desaturase 0.0
cd03507222 cd03507, Delta12-FADS-like, The Delta12 Fatty Acid 8e-78
PLN02498450 PLN02498, PLN02498, omega-3 fatty acid desaturase 1e-67
COG3239343 COG3239, DesA, Fatty acid desaturase [Lipid metabo 1e-32
pfam00487251 pfam00487, FA_desaturase, Fatty acid desaturase 5e-26
PLN02598421 PLN02598, PLN02598, omega-6 fatty acid desaturase 3e-20
cd01060122 cd01060, Membrane-FADS-like, The membrane fatty ac 2e-15
cd03511285 cd03511, Rhizopine-oxygenase-like, This CD include 2e-11
cd03506204 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid D 5e-08
pfam11960135 pfam11960, DUF3474, Domain of unknown function (DU 2e-07
>gnl|CDD|178121 PLN02505, PLN02505, omega-6 fatty acid desaturase Back     alignment and domain information 
 Score =  763 bits (1972), Expect = 0.0
 Identities = 306/382 (80%), Positives = 341/382 (89%), Gaps = 2/382 (0%)

Query: 1   MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDL 60
           MGAGGRM+VP++  K  +  +KRVP SKPPFTL  +KKAIPPHCF+RSVLRSFSY+V+DL
Sbjct: 1   MGAGGRMSVPTSSKKGSASAVKRVPSSKPPFTLGDIKKAIPPHCFKRSVLRSFSYLVYDL 60

Query: 61  TIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDD 120
            IA + YY+A  YI  LP PLSY+AWP+YWA QGC+LTGVWV+AHECGHHAFSDYQWLDD
Sbjct: 61  LIAALLYYVATNYIPLLPGPLSYVAWPLYWAAQGCVLTGVWVIAHECGHHAFSDYQWLDD 120

Query: 121 TVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVI 180
           TVGL+LHS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPK+K+A+ WY+KYLNNP GR++
Sbjct: 121 TVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSALPWYSKYLNNPPGRLL 180

Query: 181 TLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLY 240
            + V LTLGWPLYLAFNVSGRPYDRFACHFDPY PI++DRERLQI+ISDAGILA+ + LY
Sbjct: 181 HIVVQLTLGWPLYLAFNVSGRPYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLY 240

Query: 241 CLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRD 300
            L AAKGL +V C+YG PLL+VN FLVLIT LQHTHP+LPHY SSEWDW RGALATVDRD
Sbjct: 241 RLAAAKGLAWVLCVYGVPLLIVNAFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRD 300

Query: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAK 360
           YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTP YKA+WREAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPVYKALWREAK 360

Query: 361 ECLYVEPDEGDQNKGVFWYRNK 382
           EC+YVEPDEG   KGVFWY NK
Sbjct: 361 ECIYVEPDEG--GKGVFWYNNK 380

Length = 381
>gnl|CDD|239584 cd03507, Delta12-FADS-like, The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria Back     alignment and domain information
>gnl|CDD|215275 PLN02498, PLN02498, omega-3 fatty acid desaturase Back     alignment and domain information
>gnl|CDD|225779 COG3239, DesA, Fatty acid desaturase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|215943 pfam00487, FA_desaturase, Fatty acid desaturase Back     alignment and domain information
>gnl|CDD|215323 PLN02598, PLN02598, omega-6 fatty acid desaturase Back     alignment and domain information
>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information
>gnl|CDD|239588 cd03511, Rhizopine-oxygenase-like, This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins Back     alignment and domain information
>gnl|CDD|239583 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria Back     alignment and domain information
>gnl|CDD|221342 pfam11960, DUF3474, Domain of unknown function (DUF3474) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 383
PLN02505381 omega-6 fatty acid desaturase 100.0
PLN02498450 omega-3 fatty acid desaturase 100.0
PLN02598421 omega-6 fatty acid desaturase 100.0
cd03507222 Delta12-FADS-like The Delta12 Fatty Acid Desaturas 100.0
PLN03198526 delta6-acyl-lipid desaturase; Provisional 100.0
PLN03199485 delta6-acyl-lipid desaturase-like protein; Provisi 100.0
COG3239343 DesA Fatty acid desaturase [Lipid metabolism] 100.0
cd03511285 Rhizopine-oxygenase-like This CD includes the puta 100.0
cd03506204 Delta6-FADS-like The Delta6 Fatty Acid Desaturase 100.0
cd03508289 Delta4-sphingolipid-FADS-like The Delta4-sphingoli 100.0
cd03514207 CrtR_beta-carotene-hydroxylase Beta-carotene hydro 100.0
cd03513225 CrtW_beta-carotene-ketolase Beta-carotene ketolase 99.97
PLN02579323 sphingolipid delta-4 desaturase 99.97
cd03509288 DesA_FADS-like Fatty acid desaturase protein famil 99.97
PF00487257 FA_desaturase: Fatty acid desaturase This entry is 99.97
KOG4232430 consensus Delta 6-fatty acid desaturase/delta-8 sp 99.97
cd03510175 Rhizobitoxine-FADS-like This CD includes the dihyd 99.97
KOG2987324 consensus Fatty acid desaturase [Lipid transport a 99.89
cd03512314 Alkane-hydroxylase Alkane hydroxylase is a bacteri 99.8
cd01060122 Membrane-FADS-like The membrane fatty acid desatur 99.73
PF11960136 DUF3474: Domain of unknown function (DUF3474); Int 98.65
COG1398289 OLE1 Fatty-acid desaturase [Lipid metabolism] 98.56
PLN02220299 delta-9 acyl-lipid desaturase 98.27
KOG1600321 consensus Fatty acid desaturase [Lipid transport a 97.32
cd03505178 Delta9-FADS-like The Delta9 Fatty Acid Desaturase 97.2
>PLN02505 omega-6 fatty acid desaturase Back     alignment and domain information 
Probab=100.00  E-value=7.4e-77  Score=570.92  Aligned_cols=381  Identities=80%  Similarity=1.444  Sum_probs=344.7

Q ss_pred             CCCCcccccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCC
Q 016781            1 MGAGGRMAVPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHP   80 (383)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~i~~~~~la~~~~~~~~~~   80 (383)
                      ||+||||.||....++++..+++.+.++|++|++|+|+++|++||++|++|++.++++|+++++++++++..+++.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~tl~~ir~aiP~~~f~~s~~rs~~~v~~d~~~i~~~~~~a~~~~~~~p~~   80 (381)
T PLN02505          1 MGAGGRMSVPTSSKKGSASAVKRVPSSKPPFTLGDIKKAIPPHCFKRSVLRSFSYLVYDLLIAALLYYVATNYIPLLPGP   80 (381)
T ss_pred             CCCCCcCCCCccccCccccccccCCCCCCCccHHHHHHhCCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence            89999999999999999999999999999999999999999999999999999999999999998877665454445665


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcccccCcCCCchhhHHHHHHHHhhccCchHHhHHhhcccccCCCCCCCCCCcccc
Q 016781           81 LSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPK  160 (383)
Q Consensus        81 ~~~~~~~l~~~~~g~~~~~l~~l~Hda~H~s~~~~~~~N~~lg~l~~~~~~~p~~~wr~~H~~HH~~tn~~~~Dpd~~p~  160 (383)
                      +.+++|+++++++|+++.++++++|||+|+++|+++++|+++|.+++.+++.|++.||.+|+.||++||+.++|+++.|.
T Consensus        81 ~~~~l~~~~~~~~G~~~~~l~vl~HDcgH~s~~~~~~lN~~vG~i~~~~ll~p~~~Wr~~H~~HH~~tn~~~~D~~~~P~  160 (381)
T PLN02505         81 LSYVAWPLYWAAQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPK  160 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhCChHHHHHHHHHHHHHHcCCHHHHHHHHHHHhhccCCCCCCccccCc
Confidence            66778889999999999999999999999999999999999999999998999999999999999999999999999887


Q ss_pred             hhhhHhHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 016781          161 QKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIFISDAGILAMIYSLY  240 (383)
Q Consensus       161 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (383)
                      ++++.+...++.++|+.++...+++..+|||+|++.++.++.+.+...+++|.+++++++++.++.+++++++++.++++
T Consensus       161 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~p~yl~~~~~g~~~~~~~~hf~p~s~lf~~~er~~v~~S~~~i~~~~~~l~  240 (381)
T PLN02505        161 KKSALPWYSKYLNNPPGRLLHIVVQLTLGWPLYLAFNVSGRPYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLY  240 (381)
T ss_pred             CHHHHhHHHHHhcChHHHHHHHHHHHHhHHHHHHHhhhcCCCCCcccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            76654444455578888877767778899999999888876555556788888778888899999999998888877777


Q ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCccCCCCccHHhhhhhccCCCccchhHHhcccccchhhhhh
Q 016781          241 CLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHTHPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHL  320 (383)
Q Consensus       241 ~~~~~~g~~~~l~~~l~P~l~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~q~~T~~~~~~~l~~l~~~i~nyH~eHHl  320 (383)
                      .++...|++.++.+|++|+++++.|+.+++|+||++|++|++++++||+.++|+.|+|+++++++++++||+++|+.||+
T Consensus       241 ~~~~~~G~~~~l~~y~vP~lv~~~wlv~itylqHt~~~ip~~~~~~W~~~rgAl~tvdr~yg~~~~l~h~I~~~Hv~HHl  320 (381)
T PLN02505        241 RLAAAKGLAWVLCVYGVPLLIVNAFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHL  320 (381)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccCCCCcChhhccceeccCcchHHHHHHccCCcccchhhc
Confidence            66667899999999999999999999999999999999999999999999999999999999999999999559999999


Q ss_pred             cCCCCcccHHHHHHHHHhhhhcccccCCccHHHHHHHHhcccEEecCCCCCCCccEEEeecCC
Q 016781          321 FSTMPHYHAMEATKAIKPILGEYYQFDGTPFYKAMWREAKECLYVEPDEGDQNKGVFWYRNKI  383 (383)
Q Consensus       321 fP~iP~y~Lp~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (383)
                      +|+||+|||+|+++.+|+.+++||++.+.++++++|+..++|+.||+|.|  ++||++|+||.
T Consensus       321 ~srIP~Y~l~eA~~aik~~lg~~y~~~~~~~~~~l~~~~~~C~~v~~~~~--~~~v~~~~~~~  381 (381)
T PLN02505        321 FSTMPHYHAMEATKAIKPILGEYYQFDGTPVYKALWREAKECIYVEPDEG--GKGVFWYNNKF  381 (381)
T ss_pred             cCCCCCCCHHHHHHHHHHHhHHHhcCCCCcHHHHHHHHhcceEEeCcCCC--CCceEEEecCC
Confidence            99999999999999999999999998899999999999999999998876  48999999984

>PLN02498 omega-3 fatty acid desaturase Back     alignment and domain information
>PLN02598 omega-6 fatty acid desaturase Back     alignment and domain information
>cd03507 Delta12-FADS-like The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria Back     alignment and domain information
>PLN03198 delta6-acyl-lipid desaturase; Provisional Back     alignment and domain information
>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional Back     alignment and domain information
>COG3239 DesA Fatty acid desaturase [Lipid metabolism] Back     alignment and domain information
>cd03511 Rhizopine-oxygenase-like This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins Back     alignment and domain information
>cd03506 Delta6-FADS-like The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria Back     alignment and domain information
>cd03508 Delta4-sphingolipid-FADS-like The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins Back     alignment and domain information
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae Back     alignment and domain information
>cd03513 CrtW_beta-carotene-ketolase Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene Back     alignment and domain information
>PLN02579 sphingolipid delta-4 desaturase Back     alignment and domain information
>cd03509 DesA_FADS-like Fatty acid desaturase protein family subgroup, a delta-12 acyl-lipid desaturase-like, DesA-like, yet uncharacterized subgroup of membrane fatty acid desaturase proteins found in alpha-, beta-, and gamma-proteobacteria Back     alignment and domain information
>PF00487 FA_desaturase: Fatty acid desaturase This entry is only a subset of the Pfam family Back     alignment and domain information
>KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism] Back     alignment and domain information
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins Back     alignment and domain information
>KOG2987 consensus Fatty acid desaturase [Lipid transport and metabolism] Back     alignment and domain information
>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases Back     alignment and domain information
>cd01060 Membrane-FADS-like The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information
>PF11960 DUF3474: Domain of unknown function (DUF3474); InterPro: IPR021863 This presumed domain is functionally uncharacterised Back     alignment and domain information
>COG1398 OLE1 Fatty-acid desaturase [Lipid metabolism] Back     alignment and domain information
>PLN02220 delta-9 acyl-lipid desaturase Back     alignment and domain information
>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism] Back     alignment and domain information
>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00