Citrus Sinensis ID: 016822

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
MASLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDSK
cccccccccccEEEcHHHHHHccccccHHHHHHHcccccccccccccEEEEEccccccEEEEEEEEEccccEEEEEEEcccccEEEEEccccccHHHHHHHcccccccccccccccccccccccccEEEEccccEEEEcHHHccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccEEEEEcccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHcHHccccccc
cccccHHHHHHHHHcHHHccccHccccccccccEcccccEEccccHcccccccEccHHHEEEEEEEcccEEEEccEEEEEEEEEEEEccHHHHHHHHHHHcccccccccEEcccccEEEEccEEEEEEEccccccccccccEEEEcHHHHccccccccHHHccccEccccccccccccccccccHHHcccccEEEEccccccEccccccEEEEEEcccccccccEEEEEcccccccccEcccccccHHHHHHHHHHHHHHHHHHHcccHHHHccccccccHHHcccccccccccccccccHHHHHHHHHHHcEEccccEEcccEcccEccccEEcccEcEEEccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccc
MASLTIICMARRLVGQYLIKMAKDTQLLICWSMlipvaslcscmppcirfcselkarpvahgvvfrdatgakhraylkngpkneiivsagalgspqllmlsgahnitvvldqplvgqgmsdnpmnaifvpspvpVEVSLIQVVGITqfgsyieaasgenfaggspsprdygmfspkigqlskvppkqrtpEAIAEAIENMKalddpafrggfilekvmgpvstghlelrtrnpndnpsvtfnyfkepedlqRCVQGISTIEKIIESKsfskfkyesmsVPILVNMtasapvnllprhsnastslEQFCRDTVMTIWHyhggcqvgkvvdhdykvlGVDALrvidgstfyyspgtnpqATVMMLGRYMGVRILSErlasndsk
MASLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIgqlskvppkqRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHlelrtrnpndnpSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGstfyyspgtnpqATVMMLGRYMGVRILserlasndsk
MASLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGistiekiiesksfskfkYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDSK
***LTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAA***********************************************LDDPAFRGGFILEKVMGPVSTGHL************VTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRIL**********
MASLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRI***********
MASLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDSK
**SLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLAS****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASLTIICMARRLVGQYLIKMAKDTQLLICWSMLIPVASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASNDSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query382 2.2.26 [Sep-21-2011]
Q9S746594 Protein HOTHEAD OS=Arabid no no 0.835 0.537 0.525 7e-92
Q9SSM2552 (R)-mandelonitrile lyase- no no 0.735 0.509 0.441 1e-61
P52706563 (R)-mandelonitrile lyase N/A no 0.743 0.504 0.375 2e-53
Q945K2563 (R)-mandelonitrile lyase N/A no 0.743 0.504 0.369 1e-51
O50048576 (R)-mandelonitrile lyase N/A no 0.738 0.489 0.377 8e-49
O82784574 (R)-mandelonitrile lyase N/A no 0.748 0.498 0.367 3e-48
P52707573 (R)-mandelonitrile lyase N/A no 0.746 0.497 0.356 1e-47
O24243559 (R)-mandelonitrile lyase N/A no 0.704 0.481 0.343 2e-42
Q7X2H8546 Choline oxidase OS=Arthro N/A no 0.657 0.459 0.262 3e-15
B4EHJ2566 Choline dehydrogenase OS= yes no 0.756 0.510 0.264 5e-14
>sp|Q9S746|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1 Back     alignment and function desciption
 Score =  337 bits (865), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 175/333 (52%), Positives = 222/333 (66%), Gaps = 14/333 (4%)

Query: 57  RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITV 108
           RP   GV+F+D  G +H+A L N   +E+I+S+GA+GSPQ+LMLSG           I V
Sbjct: 261 RPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPV 320

Query: 109 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSP- 167
           VL+   VG+GM+DNPMN I VPS  P+E SLIQ VGIT+ G Y+EA++G    G SP   
Sbjct: 321 VLENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITKMGVYVEASTG---FGQSPESI 377

Query: 168 -RDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHL 226
              YG+ S K    S +P KQR PEA    I   K     AF G FILEK+  P+S GHL
Sbjct: 378 HTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQLHEAFNGSFILEKLAYPISRGHL 437

Query: 227 ELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKF-KYESMSVPILVNM 285
            L   N +DNPSVTFNYFK P DLQRCV+ I  + K++ S  F  + + +  +V  ++++
Sbjct: 438 SLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDKQNVHKMLSL 497

Query: 286 TASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDG 345
           +  A +NL P+  N + S+ QFC+DTV+TIWHYHGGC VGKVV  + KVLGVD LRVIDG
Sbjct: 498 SVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDG 557

Query: 346 STFYYSPGTNPQATVMMLGRYMGVRILSERLAS 378
           STF  SPGTNPQAT+MM+GRYMGV+IL ERL +
Sbjct: 558 STFDESPGTNPQATMMMMGRYMGVKILRERLGN 590
Probable FAD-dependent enzyme. Involved in regulating post-genital organ fusion. Required to limit cellular interactions between contacting epidermal cells during floral development.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana GN=At1g73050 PE=2 SV=1 Back     alignment and function description
>sp|P52706|MDL1_PRUSE (R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1 Back     alignment and function description
>sp|Q945K2|MDL2_PRUDU (R)-mandelonitrile lyase 2 OS=Prunus dulcis GN=MDL2 PE=1 SV=1 Back     alignment and function description
>sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1 Back     alignment and function description
>sp|O82784|MDL4_PRUSE (R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1 Back     alignment and function description
>sp|P52707|MDL3_PRUSE (R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1 Back     alignment and function description
>sp|O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1 Back     alignment and function description
>sp|Q7X2H8|CHOX_ARTGO Choline oxidase OS=Arthrobacter globiformis GN=codA PE=1 SV=1 Back     alignment and function description
>sp|B4EHJ2|BETA_BURCJ Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
224053991 577 predicted protein [Populus trichocarpa] 0.866 0.573 0.800 1e-157
356514078 581 PREDICTED: protein HOTHEAD-like [Glycine 0.858 0.564 0.786 1e-157
359474260 578 PREDICTED: protein HOTHEAD isoform 1 [Vi 0.874 0.577 0.781 1e-155
356563226 581 PREDICTED: protein HOTHEAD-like [Glycine 0.856 0.562 0.777 1e-155
449495903 580 PREDICTED: protein HOTHEAD-like [Cucumis 0.858 0.565 0.759 1e-148
449452496 578 PREDICTED: protein HOTHEAD-like [Cucumis 0.858 0.567 0.759 1e-148
359474262 568 PREDICTED: protein HOTHEAD isoform 2 [Vi 0.848 0.570 0.758 1e-148
357481761 580 Choline dehydrogenase [Medicago truncatu 0.850 0.560 0.732 1e-146
357481759 580 Choline dehydrogenase [Medicago truncatu 0.850 0.560 0.705 1e-139
388502080412 unknown [Medicago truncatula] 0.850 0.788 0.702 1e-139
>gi|224053991|ref|XP_002298074.1| predicted protein [Populus trichocarpa] gi|222845332|gb|EEE82879.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/341 (80%), Positives = 302/341 (88%), Gaps = 10/341 (2%)

Query: 48  IRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG----- 102
           I F ++ + +PVAHGVV+RDA+GAKHRAYLK G KNEII+S+GALGSPQLLMLSG     
Sbjct: 236 ILFATKARPKPVAHGVVYRDASGAKHRAYLKRGLKNEIIISSGALGSPQLLMLSGVGPAQ 295

Query: 103 ---AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN 159
              AHNITVVLDQP+VGQ MSDNPMNAIFVPSP+PVEVSLIQVVGITQFGSYIEAASGEN
Sbjct: 296 QLRAHNITVVLDQPMVGQLMSDNPMNAIFVPSPLPVEVSLIQVVGITQFGSYIEAASGEN 355

Query: 160 FAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMG 219
           F GGSP  RDYGMFSPKIGQLS VPPKQRTPEA+A+AIE M  LD  AF+GGFILEK+MG
Sbjct: 356 F-GGSPQ-RDYGMFSPKIGQLSTVPPKQRTPEALAKAIELMNNLDQQAFQGGFILEKIMG 413

Query: 220 PVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSV 279
           P+STGHLELRTR+P DNPSVTFNYFKEP+DLQRCV+GISTIEK+I+S+ FSKF+++ +SV
Sbjct: 414 PISTGHLELRTRHPEDNPSVTFNYFKEPQDLQRCVEGISTIEKVIDSRPFSKFRFDYLSV 473

Query: 280 PILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDA 339
           P L+NMTASAPVNLLPRH N+S SLE FC+DTVMTIWHYHGGCQ G VVDHDYKV+GVDA
Sbjct: 474 PQLLNMTASAPVNLLPRHYNSSQSLEDFCKDTVMTIWHYHGGCQAGSVVDHDYKVMGVDA 533

Query: 340 LRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASND 380
           LRVIDGSTF  SPGTNPQATVMMLGRYMGV IL ERLA  D
Sbjct: 534 LRVIDGSTFNVSPGTNPQATVMMLGRYMGVNILKERLAKED 574

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356514078|ref|XP_003525734.1| PREDICTED: protein HOTHEAD-like [Glycine max] Back     alignment and taxonomy information
>gi|359474260|ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis vinifera] gi|297742610|emb|CBI34759.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356563226|ref|XP_003549865.1| PREDICTED: protein HOTHEAD-like [Glycine max] Back     alignment and taxonomy information
>gi|449495903|ref|XP_004159980.1| PREDICTED: protein HOTHEAD-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449452496|ref|XP_004143995.1| PREDICTED: protein HOTHEAD-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359474262|ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357481761|ref|XP_003611166.1| Choline dehydrogenase [Medicago truncatula] gi|355512501|gb|AES94124.1| Choline dehydrogenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357481759|ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula] gi|355512500|gb|AES94123.1| Choline dehydrogenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388502080|gb|AFK39106.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query382
TAIR|locus:2034705572 AT1G12570 [Arabidopsis thalian 0.824 0.550 0.586 7.6e-96
TAIR|locus:2173068586 AT5G51950 [Arabidopsis thalian 0.853 0.556 0.539 4.1e-88
TAIR|locus:2078441577 AT3G56060 [Arabidopsis thalian 0.845 0.559 0.516 7.2e-84
TAIR|locus:2032627594 HTH "HOTHEAD" [Arabidopsis tha 0.835 0.537 0.516 9.7e-80
TAIR|locus:2173053582 AT5G51930 [Arabidopsis thalian 0.798 0.524 0.511 3.3e-79
TAIR|locus:2032642552 AT1G73050 [Arabidopsis thalian 0.217 0.150 0.638 2.7e-59
UNIPROTKB|Q945K2563 MDL2 "(R)-mandelonitrile lyase 0.418 0.284 0.418 1.7e-48
TAIR|locus:2035830501 AT1G14190 [Arabidopsis thalian 0.204 0.155 0.628 1.9e-38
TAIR|locus:505006121503 AT1G14185 [Arabidopsis thalian 0.185 0.141 0.647 5.4e-36
UNIPROTKB|G4N440625 MGG_16853 "Uncharacterized pro 0.714 0.436 0.299 4.6e-16
TAIR|locus:2034705 AT1G12570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
 Identities = 204/348 (58%), Positives = 236/348 (67%)

Query:    48 IRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG----- 102
             I F +    +P+A+GVV+RD TG  HRAYLK G  +EII+SAG LGSPQLLMLSG     
Sbjct:   236 ILFRTRGTTKPIANGVVYRDRTGQAHRAYLKEGALSEIILSAGTLGSPQLLMLSGVGPSA 295

Query:   103 ---AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN 159
                A NITVV+DQP VGQGM DNPMNA+FVPSPVPVEVSLI+VVGIT  G+Y+EAA GEN
Sbjct:   296 QLQAQNITVVMDQPHVGQGMYDNPMNAVFVPSPVPVEVSLIEVVGITGEGTYVEAAGGEN 355

Query:   160 FAGG------SPSPRDY-GMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGF 212
             F GG      S S RDY  MFSP+                + E+    K      F+GGF
Sbjct:   356 FGGGGGGSSGSSSTRDYYAMFSPRA--------------TLLESNSMTKLSSAQPFQGGF 401

Query:   213 ILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXX 272
             +LEKVMGP+STGHLEL+TRNP DNP VTFNYF+ P+DL+RCV+G                
Sbjct:   402 LLEKVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKRCVRGIQTIERVVQSKAFSRY 461

Query:   273 XYESMSVPILVNMTASAPVNLLPRHSNASTSL----EQFCRDTVMTIWHYHGGCQVGKVV 328
              Y  +S   L+N+TAS PVNL P  S    SL    E+FC+ TV TIWHYHGGC VG+VV
Sbjct:   462 KYADVSFEYLLNLTASTPVNLRPPRSGPGASLPPSAEEFCQHTVTTIWHYHGGCVVGRVV 521

Query:   329 DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 376
             D DYKV+G+D LRVID ST  Y PGTNPQATVMMLGRYMGV+IL ERL
Sbjct:   522 DGDYKVIGIDRLRVIDMSTVGYCPGTNPQATVMMLGRYMGVKILRERL 569
GO:0005576 "extracellular region" evidence=ISM
GO:0006066 "alcohol metabolic process" evidence=IEA
GO:0008812 "choline dehydrogenase activity" evidence=IEA
GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA
GO:0016832 "aldehyde-lyase activity" evidence=ISS
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2173068 AT5G51950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078441 AT3G56060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032627 HTH "HOTHEAD" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173053 AT5G51930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032642 AT1G73050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q945K2 MDL2 "(R)-mandelonitrile lyase 2" [Prunus dulcis (taxid:3755)] Back     alignment and assigned GO terms
TAIR|locus:2035830 AT1G14190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006121 AT1G14185 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4N440 MGG_16853 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00010969
hypothetical protein (577 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
PLN02785587 PLN02785, PLN02785, Protein HOTHEAD 1e-161
pfam05199139 pfam05199, GMC_oxred_C, GMC oxidoreductase 5e-27
COG2303542 COG2303, BetA, Choline dehydrogenase and related f 9e-25
TIGR01810532 TIGR01810, betA, choline dehydrogenase 6e-19
PRK02106560 PRK02106, PRK02106, choline dehydrogenase; Validat 3e-14
TIGR03970487 TIGR03970, Rv0697, dehydrogenase, Rv0697 family 1e-11
PRK02106560 PRK02106, PRK02106, choline dehydrogenase; Validat 6e-09
pfam00732218 pfam00732, GMC_oxred_N, GMC oxidoreductase 3e-04
>gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD Back     alignment and domain information 
 Score =  465 bits (1199), Expect = e-161
 Identities = 201/330 (60%), Positives = 245/330 (74%), Gaps = 12/330 (3%)

Query: 57  RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITV 108
           RP A GV+F+D  G +H+A+L N   +EII+SAGA+GSPQ+L+LSG         H I V
Sbjct: 254 RPRATGVIFKDENGNQHQAFLSNNKGSEIILSAGAIGSPQMLLLSGIGPKKELKKHKIPV 313

Query: 109 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPR 168
           VL    VG+GM+DNPMN+IFVPS  PVE SLIQ VGIT+ G YIEA+SG  F     S  
Sbjct: 314 VLHNEHVGKGMADNPMNSIFVPSKAPVEQSLIQTVGITKMGVYIEASSG--FGQSPDSIH 371

Query: 169 -DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLE 227
             +G+ S +IGQLS +PPKQRTPEAI   I   K L   AF GGFILEK+ GP+STGHL 
Sbjct: 372 CHHGIMSAEIGQLSTIPPKQRTPEAIQAYIHRKKNLPHEAFNGGFILEKIAGPISTGHLS 431

Query: 228 LRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKF-KYESMSVPILVNMT 286
           L   N +DNPSVTFNYFK P+DLQRCV GI TIEKI+++  F+ F + +  ++  ++NM+
Sbjct: 432 LINTNVDDNPSVTFNYFKHPQDLQRCVYGIRTIEKIVKTNHFTNFTQCDKQTMEKVLNMS 491

Query: 287 ASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGS 346
             A +NL+P+H+N + SLEQFC+DTV+TIWHYHGGC VGKVVD +YKVLGV  LRVIDGS
Sbjct: 492 VKANINLIPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVDQNYKVLGVSRLRVIDGS 551

Query: 347 TFYYSPGTNPQATVMMLGRYMGVRILSERL 376
           TF  SPGTNPQATVMM+GRYMGV+IL ERL
Sbjct: 552 TFDESPGTNPQATVMMMGRYMGVKILRERL 581

Length = 587
>gnl|CDD|218493 pfam05199, GMC_oxred_C, GMC oxidoreductase Back     alignment and domain information
>gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233581 TIGR01810, betA, choline dehydrogenase Back     alignment and domain information
>gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family Back     alignment and domain information
>gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|216089 pfam00732, GMC_oxred_N, GMC oxidoreductase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 382
KOG1238623 consensus Glucose dehydrogenase/choline dehydrogen 100.0
PLN02785587 Protein HOTHEAD 100.0
PRK02106560 choline dehydrogenase; Validated 100.0
TIGR01810532 betA choline dehydrogenase. This enzyme is a membe 100.0
COG2303542 BetA Choline dehydrogenase and related flavoprotei 100.0
TIGR02462544 pyranose_ox pyranose oxidase. Pyranose oxidase (al 100.0
PF05199144 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR0078 100.0
PF00732296 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 99.77
PRK12835584 3-ketosteroid-delta-1-dehydrogenase; Reviewed 95.34
PRK07843557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 94.61
PRK12844557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 94.5
PRK12837513 3-ketosteroid-delta-1-dehydrogenase; Provisional 94.4
PRK08274466 tricarballylate dehydrogenase; Validated 94.13
PF00890417 FAD_binding_2: FAD binding domain of the Pfam fami 94.1
KOG2404477 consensus Fumarate reductase, flavoprotein subunit 94.02
PRK12839572 hypothetical protein; Provisional 93.71
PRK07121492 hypothetical protein; Validated 93.28
PRK12845564 3-ketosteroid-delta-1-dehydrogenase; Reviewed 93.02
TIGR01813439 flavo_cyto_c flavocytochrome c. This model describ 92.32
PRK06134581 putative FAD-binding dehydrogenase; Reviewed 92.16
PRK12843578 putative FAD-binding dehydrogenase; Reviewed 91.42
PRK05675570 sdhA succinate dehydrogenase flavoprotein subunit; 91.32
PRK06263543 sdhA succinate dehydrogenase flavoprotein subunit; 91.31
TIGR01811 603 sdhA_Bsu succinate dehydrogenase or fumarate reduc 91.27
PRK13977576 myosin-cross-reactive antigen; Provisional 90.78
PRK07573 640 sdhA succinate dehydrogenase flavoprotein subunit; 90.73
TIGR01816565 sdhA_forward succinate dehydrogenase, flavoprotein 90.68
PRK12834549 putative FAD-binding dehydrogenase; Reviewed 90.13
PRK09078598 sdhA succinate dehydrogenase flavoprotein subunit; 90.12
PRK06452566 sdhA succinate dehydrogenase flavoprotein subunit; 89.85
PRK06481506 fumarate reductase flavoprotein subunit; Validated 89.31
PRK08958588 sdhA succinate dehydrogenase flavoprotein subunit; 89.25
PTZ00139617 Succinate dehydrogenase [ubiquinone] flavoprotein 89.21
PRK08071510 L-aspartate oxidase; Provisional 88.51
PTZ00306 1167 NADH-dependent fumarate reductase; Provisional 88.49
PRK12842574 putative succinate dehydrogenase; Reviewed 88.44
PRK08626 657 fumarate reductase flavoprotein subunit; Provision 88.34
PRK06175433 L-aspartate oxidase; Provisional 88.19
PLN00128635 Succinate dehydrogenase [ubiquinone] flavoprotein 87.94
TIGR01812566 sdhA_frdA_Gneg succinate dehydrogenase or fumarate 87.54
PRK08641589 sdhA succinate dehydrogenase flavoprotein subunit; 87.07
PRK08275554 putative oxidoreductase; Provisional 86.51
PRK07395553 L-aspartate oxidase; Provisional 86.4
PRK07803 626 sdhA succinate dehydrogenase flavoprotein subunit; 86.36
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 85.9
PRK09231582 fumarate reductase flavoprotein subunit; Validated 85.4
PLN02815594 L-aspartate oxidase 85.39
PF01266358 DAO: FAD dependent oxidoreductase; InterPro: IPR00 85.26
PRK07512513 L-aspartate oxidase; Provisional 84.43
TIGR01176580 fum_red_Fp fumarate reductase, flavoprotein subuni 84.24
TIGR02061 614 aprA adenosine phosphosulphate reductase, alpha su 84.23
PRK09077536 L-aspartate oxidase; Provisional 84.17
PRK08205583 sdhA succinate dehydrogenase flavoprotein subunit; 84.07
PRK07057591 sdhA succinate dehydrogenase flavoprotein subunit; 84.05
PRK05945575 sdhA succinate dehydrogenase flavoprotein subunit; 83.47
PRK13800 897 putative oxidoreductase/HEAT repeat-containing pro 82.47
PRK06854 608 adenylylsulfate reductase subunit alpha; Validated 82.43
PRK06069577 sdhA succinate dehydrogenase flavoprotein subunit; 82.42
COG0029518 NadB Aspartate oxidase [Coenzyme metabolism] 82.14
TIGR03377516 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase 82.13
PRK11101546 glpA sn-glycerol-3-phosphate dehydrogenase subunit 80.66
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=8.1e-59  Score=464.65  Aligned_cols=321  Identities=40%  Similarity=0.577  Sum_probs=242.9

Q ss_pred             ceeccCCccceEEeeccCCCCCeEEEEEEEeCCCceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCcce
Q 016822           37 VASLCSCMPPCIRFCSELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITV  108 (382)
Q Consensus        37 ~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi~~  108 (382)
                      +.+..++.|+||++|+.   +++|.||++....|++++++    ++||||||||||+||||||+||        ++|||+
T Consensus       269 L~~~~~~~vtrvl~D~~---~~~a~gv~~~~~~~~~~~v~----a~kEVILSAGAi~SPQLLMLSGIGP~~~L~~~gIpv  341 (623)
T KOG1238|consen  269 LHISRNAAVTRVLIDPA---GKRAKGVEFVRDGGKEHTVK----ARKEVILSAGAINSPQLLMLSGIGPADHLKKLGIPV  341 (623)
T ss_pred             ccccccceEEEEEEcCC---CceEEEEEEEecCceeeeec----ccceEEEeccccCCHHHHHHcCCCcHHHHHhcCCCe
Confidence            46788999999999964   88999999987447888887    5899999999999999999999        899999


Q ss_pred             eecCCCCCCCCCCCCCCeeEeecCCCccchhhhhhcccchhhHHHhccCcccccCCCCCCcccccccccccc-ccCCC--
Q 016822          109 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQL-SKVPP--  185 (382)
Q Consensus       109 ~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--  185 (382)
                      +.|+|+||+||+||+...+....+.+......+..+......|+..++|+ +....  ....++++...... ..+|+  
T Consensus       342 v~dLP~VG~nLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~G~-~~~~~--~e~~~f~~t~~~~~~~~~PD~~  418 (623)
T KOG1238|consen  342 VLDLPGVGQNLQDHPMNPGFVFSTNPVELSLIRLVGITTVGQYLEGGSGP-LASPG--VETLGFINTVSSNLSLDWPDIE  418 (623)
T ss_pred             eccCcccccccccccccceeeecCCCccccccccccchHHHHHHHcCCCC-cccCc--ceeeEEeccccccCcCCCCCee
Confidence            99999999999999998877766655544333444555567788877776 32221  01223332211100 00110  


Q ss_pred             ---------CCCCHHHHH---HHHHh-hccCCCCCCcceeEEEeecccccccEEEecCCCCCCCCeeeeCCCCChhhHHH
Q 016822          186 ---------KQRTPEAIA---EAIEN-MKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQR  252 (382)
Q Consensus       186 ---------~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i~~~y~~~~~D~~~  252 (382)
                               ......+..   .+++. +...  .....+.++..+++|.|||+|.|.++||.+.|.|++||+.+|+|++.
T Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~--~~~~~~~i~~~~l~P~SrG~l~L~s~nP~~~P~I~~NY~~~p~Dv~~  496 (623)
T KOG1238|consen  419 LHFVAGSLSSDGLTALRKALGEIYQALFGEL--TNSDSFVIFPKLLRPKSRGRLKLRSTNPRDNPLITPNYFTHPEDVAT  496 (623)
T ss_pred             EEeccccccccchhhhhhhcchHHHHhhhhh--hcCceeEEeehhcCCCccceEEecCCCCCcCceeccCcCCCHHHHHH
Confidence                     000000000   01100 0000  11123456778899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCccccccccccc--chhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC-----
Q 016822          253 CVQGISTIEKIIESKSFSKFKYESM--SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----  325 (382)
Q Consensus       253 ~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG-----  325 (382)
                      ++++++.+.++.++.+++.+..+..  +.++|...           ...+|++|+||+|+...+.||++|||+||     
T Consensus       497 ~vegi~~~~~l~~s~af~~~~~r~~~~~~~~c~~~-----------~~~sd~yw~c~~R~~~~TiyH~~GtckMGp~~D~  565 (623)
T KOG1238|consen  497 LVEGIRTIIRLSNSKAFQRFGARLWKKPVPGCDLL-----------AFLSDAYWECFCRHTVVTIYHYSGTCKMGPSSDP  565 (623)
T ss_pred             HHHHHHHHHHHHcCHHHHHhcchhccccCCCcccc-----------cCCCHHHHHHHHHhccceeeccCCceEeCCccCC
Confidence            9999999999999999988876542  33344221           24689999999999999999999999999     


Q ss_pred             -cccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhhhhccC
Q 016822          326 -KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASND  380 (382)
Q Consensus       326 -sVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~~~~~~  380 (382)
                       +|||+++|||||+||||+|||+||.+|++||++|+||||||+|+.|.+++...++
T Consensus       566 ~aVVD~~lrV~Gv~~LRVVDaSimP~~psgN~nA~v~MIgek~ad~Ik~~~~~~~~  621 (623)
T KOG1238|consen  566 TAVVDPQLRVHGVRGLRVVDASIMPESPSGNPNAPVMMIGEKAADMIKEEWLANKD  621 (623)
T ss_pred             CcccCCcceeccccCceEeeccccCCCCCCCccHHHHHHHHHHHHHHHHHhhhcCC
Confidence             9999999999999999999999999999999999999999999866655555444

>PLN02785 Protein HOTHEAD Back     alignment and domain information
>PRK02106 choline dehydrogenase; Validated Back     alignment and domain information
>TIGR01810 betA choline dehydrogenase Back     alignment and domain information
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02462 pyranose_ox pyranose oxidase Back     alignment and domain information
>PF05199 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR007867 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional Back     alignment and domain information
>PRK08274 tricarballylate dehydrogenase; Validated Back     alignment and domain information
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family Back     alignment and domain information
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK12839 hypothetical protein; Provisional Back     alignment and domain information
>PRK07121 hypothetical protein; Validated Back     alignment and domain information
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01813 flavo_cyto_c flavocytochrome c Back     alignment and domain information
>PRK06134 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK12843 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>PRK13977 myosin-cross-reactive antigen; Provisional Back     alignment and domain information
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>PRK12834 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06481 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>PRK08071 L-aspartate oxidase; Provisional Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PRK12842 putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>PRK08626 fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>PRK06175 L-aspartate oxidase; Provisional Back     alignment and domain information
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08275 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK07395 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>PRK09231 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PLN02815 L-aspartate oxidase Back     alignment and domain information
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>PRK07512 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit Back     alignment and domain information
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit Back     alignment and domain information
>PRK09077 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>PRK06854 adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit Back     alignment and domain information
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
1ju2_A536 Crystal Structure Of The Hydroxynitrile Lyase From 1e-48
3gdn_A521 Almond Hydroxynitrile Lyase In Complex With Benzald 2e-48
3red_A521 3.0 A Structure Of The Prunus Mume Hydroxynitrile L 3e-45
3nne_A546 Crystal Structure Of Choline Oxidase S101a Mutant L 4e-14
2jbv_A546 Crystal Structure Of Choline Oxidase Reveals Insigh 4e-14
3ljp_A546 Crystal Structure Of Choline Oxidase V464a Mutant L 1e-13
3fim_B566 Crystal Structure Of Aryl-Alcohol-Oxidase From Pleu 9e-08
3q9t_A577 Crystal Structure Analysis Of Formate Oxidase Lengt 4e-04
>pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 173/330 (52%), Gaps = 46/330 (13%)
Query: 59  VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVL 110
            A GV++RD+ G  H+A++++  K E+IVSAG +G+PQLL+LSG        + NI VVL
Sbjct: 229 TATGVIYRDSNGTPHQAFVRS--KGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVL 286
Query: 111 DQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDY 170
             P VGQ + DNP N I +  P P+E +++ V+GI+    + + +    F+    +   +
Sbjct: 287 SHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISN--DFYQCS----FSSLPFTTPPF 340
Query: 171 GMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRT 230
           G F           P    P            L +  F       KV GP+S G L L++
Sbjct: 341 GFF-----------PSSSYP------------LPNSTF--AHFASKVAGPLSYGSLTLKS 375
Query: 231 R-NPNDNPSVTFNYFKEPEDLQRCVQGXXXXXXXXXXXXXXXXXYESMSVPILVNMTASA 289
             N   +P+V FNY+    DL  CV G                  E +      N+    
Sbjct: 376 SSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGIP 435
Query: 290 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFY 349
               LP+      + E FCR++V + WHYHGGC VGKV+D D++V G++ALRV+DGSTF 
Sbjct: 436 ----LPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFP 491
Query: 350 YSPGTNPQATVMMLGRYMGVRILSERLASN 379
           Y+P ++PQ   +MLGRY+G++IL ER AS+
Sbjct: 492 YTPASHPQGFYLMLGRYVGIKILQERSASD 521
>pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde Length = 521 Back     alignment and structure
>pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 Length = 521 Back     alignment and structure
>pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant Length = 546 Back     alignment and structure
>pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism Length = 546 Back     alignment and structure
>pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant Length = 546 Back     alignment and structure
>pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus Eryingii Length = 566 Back     alignment and structure
>pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase Length = 577 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query382
1ju2_A536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 1e-107
1gpe_A587 Protein (glucose oxidase); oxidoreductase(flavopro 1e-38
3qvp_A583 Glucose oxidase; oxidoreductase; HET: NAG BMA MAN 3e-37
3fim_B566 ARYL-alcohol oxidase; AAO, lignin degradation, oxi 9e-37
3t37_A526 Probable dehydrogenase; BET alpha beta fold, ADP b 3e-35
3q9t_A577 Choline dehydrogenase and related flavoproteins; g 2e-34
1kdg_A546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 2e-31
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 2e-20
2jbv_A546 Choline oxidase; alcohol oxidation, flavoenyzme ox 2e-18
2jbv_A546 Choline oxidase; alcohol oxidation, flavoenyzme ox 6e-12
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 2e-11
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 6e-04
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 1e-07
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Length = 536 Back     alignment and structure
 Score =  324 bits (832), Expect = e-107
 Identities = 119/336 (35%), Positives = 179/336 (53%), Gaps = 46/336 (13%)

Query: 53  ELKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH 104
                  A GV++RD+ G  H+A+++   K E+IVSAG +G+PQLL+LSG        + 
Sbjct: 223 SNAPGLTATGVIYRDSNGTPHQAFVR--SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSL 280

Query: 105 NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGS 164
           NI VVL  P VGQ + DNP N I +  P P+E +++ V+GI+    + + +    F+   
Sbjct: 281 NIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS--NDFYQCS----FSSLP 334

Query: 165 PSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTG 224
            +   +G F           P    P               P         KV GP+S G
Sbjct: 335 FTTPPFGFF-----------PSSSYP--------------LPNSTFAHFASKVAGPLSYG 369

Query: 225 HLELRTR-NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILV 283
            L L++  N   +P+V FNY+    DL  CV G+  I +++ + +   +K E +      
Sbjct: 370 SLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGF 429

Query: 284 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVI 343
           N+        LP+      + E FCR++V + WHYHGGC VGKV+D D++V G++ALRV+
Sbjct: 430 NILGIP----LPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVV 485

Query: 344 DGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 379
           DGSTF Y+P ++PQ   +MLGRY+G++IL ER AS+
Sbjct: 486 DGSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD 521
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Length = 587 Back     alignment and structure
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Length = 583 Back     alignment and structure
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Length = 566 Back     alignment and structure
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Length = 526 Back     alignment and structure
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Length = 577 Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Length = 546 Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Length = 546 Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Length = 546 Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
3fim_B566 ARYL-alcohol oxidase; AAO, lignin degradation, oxi 100.0
3q9t_A577 Choline dehydrogenase and related flavoproteins; g 100.0
3qvp_A583 Glucose oxidase; oxidoreductase; HET: NAG BMA MAN 100.0
1ju2_A536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 100.0
1gpe_A587 Protein (glucose oxidase); oxidoreductase(flavopro 100.0
3t37_A526 Probable dehydrogenase; BET alpha beta fold, ADP b 100.0
2jbv_A546 Choline oxidase; alcohol oxidation, flavoenyzme ox 100.0
1kdg_A546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 100.0
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 100.0
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 100.0
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 100.0
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 95.65
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 93.26
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 92.16
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 91.38
4dgk_A501 Phytoene dehydrogenase; the FAD/NAD(P)-binding ros 90.41
2h88_A 621 Succinate dehydrogenase flavoprotein subunit; comp 89.79
2bs2_A 660 Quinol-fumarate reductase flavoprotein subunit A; 89.44
2rgh_A571 Alpha-glycerophosphate oxidase; flavoprotein oxida 88.85
2wdq_A588 Succinate dehydrogenase flavoprotein subunit; succ 88.75
1kf6_A 602 Fumarate reductase flavoprotein; respiration, fuma 87.16
3da1_A561 Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 86.36
3gyx_A 662 Adenylylsulfate reductase; oxidoreductase; HET: FA 85.97
1jnr_A 643 Adenylylsulfate reductase; oxidoreductase; HET: FA 85.85
1chu_A540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 84.63
3e1t_A512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 82.86
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 81.86
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Back     alignment and structure
Probab=100.00  E-value=7.3e-59  Score=478.17  Aligned_cols=318  Identities=20%  Similarity=0.327  Sum_probs=232.1

Q ss_pred             CceeccCCccceEEeeccCCCCCeEEEEEEEeCCC-ceEEEEeecCCCceEEEeCCCcCChHHHHhhc--------CCCc
Q 016822           36 PVASLCSCMPPCIRFCSELKARPVAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI  106 (382)
Q Consensus        36 p~~v~t~a~V~rI~~~~~~~~~~rAtGV~~~~~~G-~~~~v~~~~~a~~eVILaaGai~TP~LLl~SG--------~~gi  106 (382)
                      +++|+++++|+||+|++..++.+||+||+|.+.+| +.++++    |+||||||||+|+||||||+||        ++||
T Consensus       222 NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI  297 (566)
T 3fim_B          222 NLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGI  297 (566)
T ss_dssp             TEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTC
T ss_pred             CeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCC
Confidence            57899999999999972101127999999987556 777887    4699999999999999999999        8999


Q ss_pred             ceeecCCCCCCCCCCCCCCeeEeecCCCccch-h-hhh-hcccchhhHHHhccCcccccCCCCCCccccccccc--cccc
Q 016822          107 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVS-L-IQV-VGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--GQLS  181 (382)
Q Consensus       107 ~~~~~~p~VG~nL~DH~~~~v~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~~~  181 (382)
                      +++.|+|+||+|||||+.+.+.+....+.... . ... .......+|...++|+ +....  ....+++....  ..+.
T Consensus       298 ~vv~dlPgVG~NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-l~~~~--~~~~~f~~~~~~~~~~~  374 (566)
T 3fim_B          298 DTIVNNPSVGRNLSDHLLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGP-LTALI--ANHLAWLRLPSNSSIFQ  374 (566)
T ss_dssp             CCSEECTTTTCSBBCCEEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSG-GGCCS--CSEEEEECCCTTCGGGG
T ss_pred             CceecCcchhhhhhcCccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCC-cccCh--hhheeeeccccchhhhh
Confidence            99999999999999999888777765443211 0 000 0112234677777786 54321  01112221100  0000


Q ss_pred             cC---CCCCCCHHHHHHHHHhhc--cCCC-CCCcceeEEEeecccccccEEEecCCCCCCCCeeeeCCCCChhhHHHHHH
Q 016822          182 KV---PPKQRTPEAIAEAIENMK--ALDD-PAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQ  255 (382)
Q Consensus       182 ~~---~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~P~s~G~V~L~~~d~~~~P~i~~~y~~~~~D~~~~~~  255 (382)
                      ..   ......|+++..+.....  .... .....+.+...+++|.|||+|+|+++||++.|.|+++|+.+|.|++.+++
T Consensus       375 ~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~  454 (566)
T 3fim_B          375 TFPDPAAGPNSAHWETIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQ  454 (566)
T ss_dssp             TSCCCSSSTTSCSEEEEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHH
T ss_pred             hhccccccCCCCCEEEEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHH
Confidence            00   001112222100000000  0000 01123456677899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCcccccccccccchhhhhhcccCCCCcCCCCCCCChHHHHHHHhccccccCCCcccccCC------cccC
Q 016822          256 GISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVD  329 (382)
Q Consensus       256 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~p~~~~~d~~~~~~~~~~~~~~~H~~GTcrMG------sVVD  329 (382)
                      +++.+++|+++++++.+...+.           .|+.   ....+|++|++|+|+...+.+|++||||||      +|||
T Consensus       455 ~~~~~~~i~~~~~~~~~~~~~~-----------~P~~---~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD  520 (566)
T 3fim_B          455 AVKSNLRFLSGQAWADFVIRPF-----------DPRL---RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVD  520 (566)
T ss_dssp             HHHHHHHHHTSGGGTTTEEEES-----------SGGG---SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBC
T ss_pred             HHHHHHHHHhCcccCCcccccc-----------CCCc---ccccchHHHHHHHhhcccccccccCccccCCcccCCccCC
Confidence            9999999999988887754331           1210   245689999999999999999999999999      7999


Q ss_pred             CCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 016822          330 HDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE  374 (382)
Q Consensus       330 ~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~  374 (382)
                      ++||||||+||||+|+||||+.+++||++|+||||||+||.|+++
T Consensus       521 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~  565 (566)
T 3fim_B          521 PDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD  565 (566)
T ss_dssp             TTCBBTTCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEccCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999977653
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Back     alignment and structure
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Back     alignment and structure
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Back     alignment and structure
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Back     alignment and structure
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Back     alignment and structure
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Back     alignment and structure
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* Back     alignment and structure
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Back     alignment and structure
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* Back     alignment and structure
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} Back     alignment and structure
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} Back     alignment and structure
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* Back     alignment and structure
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Back     alignment and structure
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 382
d1ju2a2170 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond 3e-42
d1ju2a1351 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase { 5e-16
d1ju2a1351 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase { 7e-11
d1cf3a1385 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper 2e-12
d1cf3a1385 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper 5e-05
d1gpea1391 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic 8e-09
d1gpea1391 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic 1e-04
d1cf3a2196 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus 3e-08
d1gpea2196 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium 2e-07
d1kdga1360 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain 6e-07
d1kdga1360 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain 1e-06
d2f5va1379 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W 8e-07
d3coxa1370 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of 1e-05
d1kdga2181 d.16.1.1 (A:513-693) Flavoprotein domain of flavoc 7e-05
d1n4wa1367 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of 2e-04
>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 170 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: GMC oxidoreductases
domain: Hydroxynitrile lyase
species: Almond (Prunus dulcis) [TaxId: 3755]

 Score =  143 bits (361), Expect = 3e-42
 Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 36/204 (17%)

Query: 119 MSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIG 178
           + DNP N I +  P P+E +++ V+GI+    Y  + S   F            +     
Sbjct: 2   LHDNPRNFINILPPNPIEPTIVTVLGISN-DFYQCSFSSLPFTTPPFGFFPSSSYPL--- 57

Query: 179 QLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNP 237
                                      P         KV GP+S G L L+ + N   +P
Sbjct: 58  ---------------------------PNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSP 90

Query: 238 SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRH 297
           +V FNY+    DL  CV G+  I +++ + +   +K E +      N+        LP+ 
Sbjct: 91  NVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGIP----LPKD 146

Query: 298 SNASTSLEQFCRDTVMTIWHYHGG 321
                + E FCR++V + WHYHGG
Sbjct: 147 QTDDAAFETFCRESVASYWHYHGG 170
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 351 Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 351 Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 Back     information, alignment and structure
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 196 Back     information, alignment and structure
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 196 Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 Back     information, alignment and structure
>d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 181 Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query382
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 99.92
d1gpea1391 Glucose oxidase {Penicillium amagasakiense [TaxId: 99.91
d1cf3a1385 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 99.9
d1kdga1360 Flavoprotein domain of flavocytochrome cellobiose 99.86
d1ju2a1351 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 99.79
d1kdga2181 Flavoprotein domain of flavocytochrome cellobiose 99.64
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 99.63
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 99.62
d1ju2a2170 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 99.6
d1cf3a2196 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 99.59
d1gpea2196 Glucose oxidase {Penicillium amagasakiense [TaxId: 99.58
d2f5va2198 Pyranose 2-oxidase {White-rot fungus (Peniophora s 97.36
d1y0pa2308 Flavocytochrome c3 (respiratory fumarate reductase 96.12
d1d4ca2322 Flavocytochrome c3 (respiratory fumarate reductase 95.44
d1qo8a2317 Flavocytochrome c3 (respiratory fumarate reductase 95.16
d1kf6a2311 Fumarate reductase {Escherichia coli [TaxId: 562]} 93.88
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 93.02
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 91.0
d2bs2a2336 Fumarate reductase {Wolinella succinogenes [TaxId: 89.64
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 86.23
d1chua2305 L-aspartate oxidase {Escherichia coli [TaxId: 562] 83.24
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=99.92  E-value=1.6e-25  Score=214.93  Aligned_cols=61  Identities=23%  Similarity=0.109  Sum_probs=57.6

Q ss_pred             cCCCcccccCC--cccCCCCeEeeeCCeEEeecccCCCCCCCChHHHHHHHHHHHHHHHHHhh
Q 016822          315 IWHYHGGCQVG--KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER  375 (382)
Q Consensus       315 ~~H~~GTcrMG--sVVD~~~rV~gv~NL~VvDaSvfP~~~~~Np~~Ti~alA~r~A~~i~~~~  375 (382)
                      ..|.||+|||+  +|||+++||||++||||+|+|+||+.+++|||+|++|||+|+|++|++..
T Consensus       311 g~h~mG~~~~~~~~vvd~~~~v~g~~nlyv~d~sv~p~~~~~nPt~t~~alA~r~a~~i~~~~  373 (379)
T d2f5va1         311 GSHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNF  373 (379)
T ss_dssp             TBTCBCSCTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCSHHHHHHHHHHHHHHHHHHC
T ss_pred             ceeecccCCCCCCccCCCCCcccccCCEEEeCCcccCCccccCcHHHHHHHHHHHHHHHHHhh
Confidence            45999999998  89999999999999999999999999999999999999999999888753
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d2f5va2 d.16.1.1 (A:355-552) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure